BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046544
(646 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 198/483 (40%), Gaps = 60/483 (12%)
Query: 1 EIPLEISN-LQNLEELDLRHNKLVGTVPAAIFNMSMXXXXXXXXXXXXXXXSSIADVRLP 59
EIP +S L LDL N G VP + S+ +++
Sbjct: 281 EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMR 340
Query: 60 NLEALLLWGNNFSGTIPRFIFN-ASKLSILELSQNSFSG-FIPNTFGNLRN-LEWLNLRD 116
L+ L L N FSG +P + N ++ L L+LS N+FSG +PN N +N L+ L L++
Sbjct: 341 GLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQN 400
Query: 117 NYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSG 176
N T P +LSNC L +HLS N L G + +S+G+LS L+D + + G
Sbjct: 401 NGFTGKIPP-----TLSNCSELVSLHLSFNYLSGTI-PSSLGSLSK-LRDLKLWLNMLEG 453
Query: 177 GIPEEITNLTNSITIDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSIPDSICRLTEL 236
IP+E+ + T+ L N L G IP LS N+L G IP I RL L
Sbjct: 454 EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL 513
Query: 237 YELELGGNKLFGSIPACFSNLASLRILSLSSNELT-SIPLTFWNLKDILQLNF------- 288
L+L N G+IPA + SL L L++N +IP + + NF
Sbjct: 514 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYV 573
Query: 289 ---------------------------------------SSNFLTGPLPLEIGNLKVLIG 309
+S G N ++
Sbjct: 574 YIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF 633
Query: 310 IDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLIXXXXXXXXXXXXXGAI 369
+D S N S IP EIG + L L LG+N + GSIPD GDL G I
Sbjct: 634 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 693
Query: 370 PTSLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFAAESFEGNELLCGSPTLQVLPCKTS-- 427
P ++ L+ L +++LS N L G IP G F F F N LCG P + P
Sbjct: 694 PQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPSNADGY 753
Query: 428 IHH 430
HH
Sbjct: 754 AHH 756
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/339 (34%), Positives = 162/339 (47%), Gaps = 12/339 (3%)
Query: 12 LEELDLRHNKLVGTVPAAIFNMSMXXXXXXXXXXXXXXXSSIADVRLPNLEALLLWGNNF 71
L+ LD+ NKL G AI S I + L +L+ L L N F
Sbjct: 222 LQHLDISGNKLSGDFSRAI---STCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKF 278
Query: 72 SGTIPRFIFNA-SKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLS 130
+G IP F+ A L+ L+LS N F G +P FG+ LE L L N + P +
Sbjct: 279 TGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP----MD 334
Query: 131 SLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGI-PEEITNLTNSI 189
+L + L + LS N G L + S+ NLS SL +S+ N SG I P N N++
Sbjct: 335 TLLKMRGLKVLDLSFNEFSGELPE-SLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 393
Query: 190 T-IDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSIPDSICRLTELYELELGGNKLFG 248
+ L N G IP TLS N L G+IP S+ L++L +L+L N L G
Sbjct: 394 QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEG 453
Query: 249 SIPACFSNLASLRILSLSSNELTS-IPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVL 307
IP + +L L L N+LT IP N ++ ++ S+N LTG +P IG L+ L
Sbjct: 454 EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL 513
Query: 308 IGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIP 346
+ S N+FS IP E+G ++L +L L N G+IP
Sbjct: 514 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 151/365 (41%), Gaps = 44/365 (12%)
Query: 57 RLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRD 116
R NLE L + NNFS IP F+ + S L L++S N SG L+ LN+
Sbjct: 195 RCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 253
Query: 117 NYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSG 176
N P L KSL ++ L++N G + DF C+
Sbjct: 254 NQFVGPIPPLPL-------KSLQYLSLAENKFTG------------EIPDFLSGACDTLT 294
Query: 177 GIPEEITNLTNSITIDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSIP-DSICRLTE 235
G +DL GN G++P N G +P D++ ++
Sbjct: 295 G-------------LDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRG 341
Query: 236 LYELELGGNKLFGSIPACFSNL-ASLRILSLSSNELTS--IPLTFWNLKDILQ-LNFSSN 291
L L+L N+ G +P +NL ASL L LSSN + +P N K+ LQ L +N
Sbjct: 342 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN 401
Query: 292 FLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGD 351
TG +P + N L+ + S N S IP+ +G L L L L N LEG IP
Sbjct: 402 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY 461
Query: 352 LIXXXXXXXXXXXXXGAIPTSLEKLSYLEDLNLSFNKLEGEIPRG-GSFGNFAA-----E 405
+ G IP+ L + L ++LS N+L GEIP+ G N A
Sbjct: 462 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 521
Query: 406 SFEGN 410
SF GN
Sbjct: 522 SFSGN 526
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 149/351 (42%), Gaps = 47/351 (13%)
Query: 61 LEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLT 120
L+ L + GN SG R I ++L +L +S N F G IP L++L++L+L +N T
Sbjct: 222 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFT 279
Query: 121 SSTPELSFLSSLSNCKSLTFIHLSDN------------------------------PLDG 150
P+ FLS C +LT + LS N P+D
Sbjct: 280 GEIPD--FLSGA--CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDT 335
Query: 151 ILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSI-TIDLGGNKLNGSIPITL--S 207
+L + L S +F SG +PE +TNL+ S+ T+DL N +G I L +
Sbjct: 336 LLKMRGLKVLDLSFNEF-------SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQN 388
Query: 208 XXXXXXXXXXXXNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSS 267
N G IP ++ +EL L L N L G+IP+ +L+ LR L L
Sbjct: 389 PKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWL 448
Query: 268 NELTS-IPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIG 326
N L IP +K + L N LTG +P + N L I S N + IP IG
Sbjct: 449 NMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 508
Query: 327 GLKNLEYLFLGYNRLEGSIPDSFGDLIXXXXXXXXXXXXXGAIPTSLEKLS 377
L+NL L L N G+IP GD G IP ++ K S
Sbjct: 509 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQS 559
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 156/364 (42%), Gaps = 42/364 (11%)
Query: 61 LEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLT 120
L+ L + GN SG + + L L++S N+FS IP G+ L+ L++ N L+
Sbjct: 177 LKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLS 233
Query: 121 SSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPE 180
F ++S C L +++S N G + + SL+ ++ +G IP+
Sbjct: 234 GD-----FSRAISTCTELKLLNISSNQFVGPIPPLPL----KSLQYLSLAENKFTGEIPD 284
Query: 181 EITNLTNSIT-IDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSIP-DSICRLTELYE 238
++ +++T +DL GN G++P N G +P D++ ++ L
Sbjct: 285 FLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKV 344
Query: 239 LELGGNKLFGSIPACFSNL-ASLRILSLSSNELT-------------------------- 271
L+L N+ G +P +NL ASL L LSSN +
Sbjct: 345 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 404
Query: 272 -SIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKN 330
IP T N +++ L+ S N+L+G +P +G+L L + +N IP E+ +K
Sbjct: 405 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 464
Query: 331 LEYLFLGYNRLEGSIPDSFGDLIXXXXXXXXXXXXXGAIPTSLEKLSYLEDLNLSFNKLE 390
LE L L +N L G IP + G IP + +L L L LS N
Sbjct: 465 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 524
Query: 391 GEIP 394
G IP
Sbjct: 525 GNIP 528
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 257 LASLRILSLSSNELTSIPLTFWNLKD----ILQLNFSSNFLTGPLPLEIGNLKVLIGIDF 312
L SL +L LS+N ++ + W L D + L S N ++G +++ L +D
Sbjct: 147 LNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISG--DVDVSRCVNLEFLDV 204
Query: 313 SMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLIXXXXXXXXXXXXXGAIPT- 371
S NNFS+ IP +G L++L + N+L G + G IP
Sbjct: 205 SSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL 263
Query: 372 SLEKLSYLEDLNLSFNKLEGEIP 394
L+ L YL L+ NK GEIP
Sbjct: 264 PLKSLQYLS---LAENKFTGEIP 283
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 196/474 (41%), Gaps = 58/474 (12%)
Query: 1 EIPLEISN-LQNLEELDLRHNKLVGTVPAAIFNMSMXXXXXXXXXXXXXXXSSIADVRLP 59
EIP +S L LDL N G VP + S+ +++
Sbjct: 284 EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMR 343
Query: 60 NLEALLLWGNNFSGTIPRFIFN-ASKLSILELSQNSFSG-FIPNTFGNLRN-LEWLNLRD 116
L+ L L N FSG +P + N ++ L L+LS N+FSG +PN N +N L+ L L++
Sbjct: 344 GLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQN 403
Query: 117 NYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSG 176
N T P +LSNC L +HLS N L G + +S+G+LS L+D + + G
Sbjct: 404 NGFTGKIPP-----TLSNCSELVSLHLSFNYLSGTI-PSSLGSLSK-LRDLKLWLNMLEG 456
Query: 177 GIPEEITNLTNSITIDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSIPDSICRLTEL 236
IP+E+ + T+ L N L G IP LS N+L G IP I RL L
Sbjct: 457 EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL 516
Query: 237 YELELGGNKLFGSIPACFSNLASLRILSLSSNELT-SIPLTFWNLKDILQLNF------- 288
L+L N G+IPA + SL L L++N +IP + + NF
Sbjct: 517 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYV 576
Query: 289 ---------------------------------------SSNFLTGPLPLEIGNLKVLIG 309
+S G N ++
Sbjct: 577 YIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF 636
Query: 310 IDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLIXXXXXXXXXXXXXGAI 369
+D S N S IP EIG + L L LG+N + GSIPD GDL G I
Sbjct: 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 696
Query: 370 PTSLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFAAESFEGNELLCGSPTLQVLP 423
P ++ L+ L +++LS N L G IP G F F F N LCG P + P
Sbjct: 697 PQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDP 750
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 154/342 (45%), Gaps = 36/342 (10%)
Query: 12 LEELDLRHNKLVGTVPAAIFNMSMXXXXXXXXXXXXXXXSSIADVRLPNLEALLLWGNNF 71
L+ LD+ NKL G AI S I + L +L+ L L N F
Sbjct: 225 LQHLDISGNKLSGDFSRAI---STCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKF 281
Query: 72 SGTIPRFIFNA-SKLSILELSQNSFSGFIPNTFG-------------------------N 105
+G IP F+ A L+ L+LS N F G +P FG
Sbjct: 282 TGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLK 341
Query: 106 LRNLEWLNLRDNYLTSSTPELSFLSSLSN-CKSLTFIHLSDNPLDGILSKTSIGNLSHSL 164
+R L+ L+L N + PE SL+N SL + LS N G + N ++L
Sbjct: 342 MRGLKVLDLSFNEFSGELPE-----SLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 396
Query: 165 KDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEG 224
++ Y+ N +G IP ++N + +++ L N L+G+IP +L N LEG
Sbjct: 397 QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEG 456
Query: 225 SIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTS-IPLTFWNLKDI 283
IP + + L L L N L G IP+ SN +L +SLS+N LT IP L+++
Sbjct: 457 EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL 516
Query: 284 LQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEI 325
L S+N +G +P E+G+ + LI +D + N F+ IP +
Sbjct: 517 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 151/365 (41%), Gaps = 44/365 (12%)
Query: 57 RLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRD 116
R NLE L + NNFS IP F+ + S L L++S N SG L+ LN+
Sbjct: 198 RCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 256
Query: 117 NYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSG 176
N P L KSL ++ L++N G + DF C+
Sbjct: 257 NQFVGPIPPLPL-------KSLQYLSLAENKFTG------------EIPDFLSGACDTLT 297
Query: 177 GIPEEITNLTNSITIDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSIP-DSICRLTE 235
G +DL GN G++P N G +P D++ ++
Sbjct: 298 G-------------LDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRG 344
Query: 236 LYELELGGNKLFGSIPACFSNL-ASLRILSLSSNELTS--IPLTFWNLKDILQ-LNFSSN 291
L L+L N+ G +P +NL ASL L LSSN + +P N K+ LQ L +N
Sbjct: 345 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN 404
Query: 292 FLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGD 351
TG +P + N L+ + S N S IP+ +G L L L L N LEG IP
Sbjct: 405 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY 464
Query: 352 LIXXXXXXXXXXXXXGAIPTSLEKLSYLEDLNLSFNKLEGEIPRG-GSFGNFAA-----E 405
+ G IP+ L + L ++LS N+L GEIP+ G N A
Sbjct: 465 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 524
Query: 406 SFEGN 410
SF GN
Sbjct: 525 SFSGN 529
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 149/351 (42%), Gaps = 47/351 (13%)
Query: 61 LEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLT 120
L+ L + GN SG R I ++L +L +S N F G IP L++L++L+L +N T
Sbjct: 225 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFT 282
Query: 121 SSTPELSFLSSLSNCKSLTFIHLSDN------------------------------PLDG 150
P+ FLS C +LT + LS N P+D
Sbjct: 283 GEIPD--FLSGA--CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDT 338
Query: 151 ILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSI-TIDLGGNKLNGSIPITL--S 207
+L + L S +F SG +PE +TNL+ S+ T+DL N +G I L +
Sbjct: 339 LLKMRGLKVLDLSFNEF-------SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQN 391
Query: 208 XXXXXXXXXXXXNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSS 267
N G IP ++ +EL L L N L G+IP+ +L+ LR L L
Sbjct: 392 PKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWL 451
Query: 268 NELTS-IPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIG 326
N L IP +K + L N LTG +P + N L I S N + IP IG
Sbjct: 452 NMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 511
Query: 327 GLKNLEYLFLGYNRLEGSIPDSFGDLIXXXXXXXXXXXXXGAIPTSLEKLS 377
L+NL L L N G+IP GD G IP ++ K S
Sbjct: 512 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQS 562
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 156/364 (42%), Gaps = 42/364 (11%)
Query: 61 LEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLT 120
L+ L + GN SG + + L L++S N+FS IP G+ L+ L++ N L+
Sbjct: 180 LKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLS 236
Query: 121 SSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPE 180
F ++S C L +++S N G + + SL+ ++ +G IP+
Sbjct: 237 GD-----FSRAISTCTELKLLNISSNQFVGPIPPLPL----KSLQYLSLAENKFTGEIPD 287
Query: 181 EITNLTNSIT-IDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSIP-DSICRLTELYE 238
++ +++T +DL GN G++P N G +P D++ ++ L
Sbjct: 288 FLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKV 347
Query: 239 LELGGNKLFGSIPACFSNL-ASLRILSLSSNELT-------------------------- 271
L+L N+ G +P +NL ASL L LSSN +
Sbjct: 348 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 407
Query: 272 -SIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKN 330
IP T N +++ L+ S N+L+G +P +G+L L + +N IP E+ +K
Sbjct: 408 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 467
Query: 331 LEYLFLGYNRLEGSIPDSFGDLIXXXXXXXXXXXXXGAIPTSLEKLSYLEDLNLSFNKLE 390
LE L L +N L G IP + G IP + +L L L LS N
Sbjct: 468 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 527
Query: 391 GEIP 394
G IP
Sbjct: 528 GNIP 531
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 257 LASLRILSLSSNELTSIPLTFWNLKD----ILQLNFSSNFLTGPLPLEIGNLKVLIGIDF 312
L SL +L LS+N ++ + W L D + L S N ++G +++ L +D
Sbjct: 150 LNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISG--DVDVSRCVNLEFLDV 207
Query: 313 SMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLIXXXXXXXXXXXXXGAIPT- 371
S NNFS+ IP +G L++L + N+L G + G IP
Sbjct: 208 SSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL 266
Query: 372 SLEKLSYLEDLNLSFNKLEGEIP 394
L+ L YL L+ NK GEIP
Sbjct: 267 PLKSLQYLS---LAENKFTGEIP 286
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Query: 480 RTFSYLELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFK-SFAVE 538
+ FS EL A++ FS N++GRGGFG VYK RL DG VAVK + + + F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 539 CEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLY---SSNCILDIFQRLNIM 595
EM+ HRNL+++ C + LV Y +GS+ L S LD +R I
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 596 IDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
+ A L YLH C +IH D+K N+LLD+ A + DFG+AKL+ +D
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 196
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 480 RTFSYLELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFK-SFAVE 538
+ FS EL A++ F N++GRGGFG VYK RL DG VAVK + + + F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 539 CEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLY---SSNCILDIFQRLNIM 595
EM+ HRNL+++ C + LV Y +GS+ L S LD +R I
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 596 IDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
+ A L YLH C +IH D+K N+LLD+ A + DFG+AKL+ +D
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 188
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 87/159 (54%), Gaps = 6/159 (3%)
Query: 485 LELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKS 544
++L ATN F LIG G FG VYK L DG +VA+K + + + F E E +
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSN---CILDIFQRLNIMIDVASA 601
RH +L+ +I C L+ +Y +G+L+++LY S+ + QRL I I A
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 602 LEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
L YLH +IH D+K N+LLD+N V ++DFGI+K
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK 187
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 87/159 (54%), Gaps = 6/159 (3%)
Query: 485 LELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKS 544
++L ATN F LIG G FG VYK L DG +VA+K + + + F E E +
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSN---CILDIFQRLNIMIDVASA 601
RH +L+ +I C L+ +Y +G+L+++LY S+ + QRL I I A
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 602 LEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
L YLH +IH D+K N+LLD+N V ++DFGI+K
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK 187
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 117/247 (47%), Gaps = 28/247 (11%)
Query: 173 NVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSIPDSICR 232
N+ G IP I LT + + ++G+IP LS N L G++P SI
Sbjct: 88 NLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS 147
Query: 233 LTELYELELGGNKLFGSIPACFSNLASL-RILSLSSNELT-SIPLTFWNLKDILQLNFSS 290
L L + GN++ G+IP + + + L +++S N LT IP TF NL ++ ++ S
Sbjct: 148 LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSR 206
Query: 291 NFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFG 350
N L G + G+ K I + N+ + + ++G KNL L L NR+ G++P
Sbjct: 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQG-- 263
Query: 351 DLIXXXXXXXXXXXXXGAIPTSLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFAAESFEGN 410
L +L +L LN+SFN L GEIP+GG+ F ++ N
Sbjct: 264 ----------------------LTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANN 301
Query: 411 ELLCGSP 417
+ LCGSP
Sbjct: 302 KCLCGSP 308
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 11/221 (4%)
Query: 51 SSIADVRLPNLEALLLWG-NNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNL 109
SS+A+ LP L L + G NN G IP I ++L L ++ + SG IP+ ++ L
Sbjct: 70 SSLAN--LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 110 EWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYM 169
L+ N L+ + P +SSL N +TF N + G + S G+ S +
Sbjct: 128 VTLDFSYNALSGTLPP--SISSLPNLVGITF---DGNRISGAIPD-SYGSFSKLFTSMTI 181
Query: 170 SNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSIPDS 229
S ++G IP NL N +DL N L G + N L +
Sbjct: 182 SRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GK 239
Query: 230 ICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNEL 270
+ L L+L N+++G++P + L L L++S N L
Sbjct: 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNL 280
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFK--SFAVECEMMKSIRHRNLIKVISSC 557
IG G FG+V++A G +VAVK+ Q A + F E +MK +RH N++ + +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 558 SNEEFKALVLEYKPHGSLEKYLYSSNC--ILDIFQRLNIMIDVASALEYLHFGCLAPVIH 615
+ ++V EY GSL + L+ S LD +RL++ DVA + YLH P++H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 616 CDLKPDNVLLDDNLVAYLSDFGIAKL 641
DLK N+L+D + DFG+++L
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFK--SFAVECEMMKSIRHRNLIKVISSC 557
IG G FG+V++A G +VAVK+ Q A + F E +MK +RH N++ + +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 558 SNEEFKALVLEYKPHGSLEKYLYSSNC--ILDIFQRLNIMIDVASALEYLHFGCLAPVIH 615
+ ++V EY GSL + L+ S LD +RL++ DVA + YLH P++H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 616 CDLKPDNVLLDDNLVAYLSDFGIAKL 641
+LK N+L+D + DFG+++L
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 22/177 (12%)
Query: 479 WRTFSYLELCRATNGFSEN------NLIGRGGFGSVYKARLGDGMEVAVK----VFNLQC 528
+ +FS+ EL TN F E N +G GGFG VYK + + VAVK + ++
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 70
Query: 529 GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI--- 585
+ F E ++M +H NL++++ S+ + LV Y P+GSL L +C+
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGT 127
Query: 586 --LDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
L R I A+ + +LH IH D+K N+LLD+ A +SDFG+A+
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR 181
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 22/177 (12%)
Query: 479 WRTFSYLELCRATNGFSEN------NLIGRGGFGSVYKARLGDGMEVAVK----VFNLQC 528
+ +FS+ EL TN F E N +G GGFG VYK + + VAVK + ++
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 70
Query: 529 GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI--- 585
+ F E ++M +H NL++++ S+ + LV Y P+GSL L +C+
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGT 127
Query: 586 --LDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
L R I A+ + +LH IH D+K N+LLD+ A +SDFG+A+
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR 181
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 22/177 (12%)
Query: 479 WRTFSYLELCRATNGFSEN------NLIGRGGFGSVYKARLGDGMEVAVK----VFNLQC 528
+ +FS+ EL TN F E N +G GGFG VYK + + VAVK + ++
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 64
Query: 529 GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI--- 585
+ F E ++M +H NL++++ S+ + LV Y P+GSL L +C+
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGT 121
Query: 586 --LDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
L R I A+ + +LH IH D+K N+LLD+ A +SDFG+A+
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR 175
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 10/145 (6%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNL--QCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G FG+VYK + GD VAVK+ + F++F E +++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
+ + A+V ++ SL K+L+ +FQ ++I A ++YLH +IH
Sbjct: 101 MTKDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHR 156
Query: 617 DLKPDNVLLDDNLVAYLSDFGIAKL 641
D+K +N+ L + L + DFG+A +
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATV 181
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 489 RATNGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKSFAVE 538
R F E +L +G+G FGSV R L D G VAVK + F E
Sbjct: 33 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 92
Query: 539 CEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI 596
E++KS++H N++K C + + L++EY P+GSL YL +D + L
Sbjct: 93 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 152
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ +EYL IH DL N+L+++ + DFG+ K+L
Sbjct: 153 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 195
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 492 NGFSENNLIGRGGFGSVYKARLG-DG--MEVAVKVFNLQCGRA-FKSFAVECEMMKSI-R 546
N ++IG G FG V KAR+ DG M+ A+K + + FA E E++ +
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 547 HRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---------------LDIFQR 591
H N+I ++ +C + + L +EY PHG+L +L S + L Q
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 592 LNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
L+ DVA ++YL IH DL N+L+ +N VA ++DFG+++
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 489 RATNGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKSFAVE 538
R F E +L +G+G FGSV R L D G VAVK + F E
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 539 CEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI 596
E++KS++H N++K C + + L++EY P+GSL YL +D + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 124
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ +EYL IH DL N+L+++ + DFG+ K+L
Sbjct: 125 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 492 NGFSENNLIGRGGFGSVYKARLG-DG--MEVAVKVFNLQCGRA-FKSFAVECEMMKSI-R 546
N ++IG G FG V KAR+ DG M+ A+K + + FA E E++ +
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 547 HRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---------------LDIFQR 591
H N+I ++ +C + + L +EY PHG+L +L S + L Q
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 592 LNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
L+ DVA ++YL IH DL N+L+ +N VA ++DFG+++
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 489 RATNGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKSFAVE 538
R F E +L +G+G FGSV R L D G VAVK + F E
Sbjct: 7 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 66
Query: 539 CEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI 596
E++KS++H N++K C + + L++EY P+GSL YL +D + L
Sbjct: 67 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 126
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ +EYL IH DL N+L+++ + DFG+ K+L
Sbjct: 127 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 169
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 489 RATNGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKSFAVE 538
R F E +L +G+G FGSV R L D G VAVK + F E
Sbjct: 2 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 61
Query: 539 CEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI 596
E++KS++H N++K C + + L++EY P+GSL YL +D + L
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ +EYL IH DL N+L+++ + DFG+ K+L
Sbjct: 122 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 489 RATNGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKSFAVE 538
R F E +L +G+G FGSV R L D G VAVK + F E
Sbjct: 9 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 68
Query: 539 CEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI 596
E++KS++H N++K C + + L++EY P+GSL YL +D + L
Sbjct: 69 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 128
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ +EYL IH DL N+L+++ + DFG+ K+L
Sbjct: 129 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 171
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 489 RATNGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKSFAVE 538
R F E +L +G+G FGSV R L D G VAVK + F E
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 60
Query: 539 CEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI 596
E++KS++H N++K C + + L++EY P+GSL YL +D + L
Sbjct: 61 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 120
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ +EYL IH DL N+L+++ + DFG+ K+L
Sbjct: 121 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 163
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 489 RATNGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKSFAVE 538
R F E +L +G+G FGSV R L D G VAVK + F E
Sbjct: 8 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 67
Query: 539 CEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI 596
E++KS++H N++K C + + L++EY P+GSL YL +D + L
Sbjct: 68 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 127
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ +EYL IH DL N+L+++ + DFG+ K+L
Sbjct: 128 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 170
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 489 RATNGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKSFAVE 538
R F E +L +G+G FGSV R L D G VAVK + F E
Sbjct: 6 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 65
Query: 539 CEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI 596
E++KS++H N++K C + + L++EY P+GSL YL +D + L
Sbjct: 66 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 125
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ +EYL IH DL N+L+++ + DFG+ K+L
Sbjct: 126 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 168
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 489 RATNGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKSFAVE 538
R F E +L +G+G FGSV R L D G VAVK + F E
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 539 CEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI 596
E++KS++H N++K C + + L++EY P+GSL YL + +D + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTS 124
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ +EYL IH DL N+L+++ + DFG+ K+L
Sbjct: 125 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 9/154 (5%)
Query: 495 SENNLIGRGGFGSVYKARLGDG---MEVAVKVFNLQCGRAFKS---FAVECEMMKSIRHR 548
+ +IG G FG VYK L EV V + L+ G K F E +M H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 549 NLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
N+I++ S + ++ EY +G+L+K+L + + Q + ++ +A+ ++YL
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL--- 163
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+H DL N+L++ NLV +SDFG++++L
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 494 FSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKSFAVECEMMK 543
F E +L +G+G FGSV R L D G VAVK + F E E++K
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 544 SIRHRNLIKVISSCSNEEFK--ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 601
S++H N++K C + + L++EY P+GSL YL +D + L +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 602 LEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+EYL IH DL N+L+++ + DFG+ K+L
Sbjct: 145 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 182
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 9/158 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RAFKSFAVECEMMKS 544
ATN S + ++G G FG V RL E++V + L+ G + + F E +M
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
H N+I++ + + +V EY +GSL+ +L + + Q + ++ +AS ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
L +H DL N+L++ NLV +SDFG+A++L
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVL 197
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 494 FSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKSFAVECEMMK 543
F E +L +G+G FGSV R L D G VAVK + F E E++K
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 544 SIRHRNLIKVISSCSNEEFK--ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 601
S++H N++K C + + L++EY P+GSL YL +D + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 602 LEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+EYL IH DL N+L+++ + DFG+ K+L
Sbjct: 127 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 494 FSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKSFAVECEMMK 543
F E +L +G+G FGSV R L D G VAVK + F E E++K
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 544 SIRHRNLIKVISSCSNEEFK--ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 601
S++H N++K C + + L++EY P+GSL YL +D + L +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 602 LEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+EYL IH DL N+L+++ + DFG+ K+L
Sbjct: 145 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 182
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 494 FSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKSFAVECEMMK 543
F E +L +G+G FGSV R L D G VAVK + F E E++K
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 544 SIRHRNLIKVISSCSNEEFK--ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 601
S++H N++K C + + L++EY P+GSL YL +D + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 602 LEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+EYL IH DL N+L+++ + DFG+ K+L
Sbjct: 127 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 489 RATNGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKSFAVE 538
R F E +L +G+G FGSV R L D G VAVK + F E
Sbjct: 5 RDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 539 CEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI 596
E++KS++H N++K C + + L++E+ P+GSL +YL +D + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTS 124
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ +EYL IH DL N+L+++ + DFG+ K+L
Sbjct: 125 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 494 FSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKSFAVECEMMK 543
F E +L +G+G FGSV R L D G VAVK + F E E++K
Sbjct: 5 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 64
Query: 544 SIRHRNLIKVISSCSNEEFK--ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 601
S++H N++K C + + L++EY P+GSL YL +D + L +
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 124
Query: 602 LEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+EYL IH DL N+L+++ + DFG+ K+L
Sbjct: 125 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 162
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 11/176 (6%)
Query: 473 MPLVATWRTFSYLELCRATNGFSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG- 529
+P +T + + ATN S + ++G G FG V RL E++V + L+ G
Sbjct: 15 VPRGSTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY 73
Query: 530 --RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILD 587
+ + F E +M H N+I++ + + +V EY +GSL+ +L +
Sbjct: 74 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 133
Query: 588 IFQRLNIMIDVASALEYL-HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ Q + ++ +AS ++YL G +H DL N+L++ NLV +SDFG++++L
Sbjct: 134 VIQLVGMLRGIASGMKYLSDMG----YVHRDLAARNILINSNLVCKVSDFGLSRVL 185
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 86/177 (48%), Gaps = 22/177 (12%)
Query: 479 WRTFSYLELCRATNGFSEN------NLIGRGGFGSVYKARLGDGMEVAVK----VFNLQC 528
+ +FS+ EL TN F E N G GGFG VYK + + VAVK + ++
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 61
Query: 529 GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI--- 585
+ F E ++ +H NL++++ S+ + LV Y P+GSL L +C+
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL---SCLDGT 118
Query: 586 --LDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
L R I A+ + +LH IH D+K N+LLD+ A +SDFG+A+
Sbjct: 119 PPLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR 172
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 17/157 (10%)
Query: 497 NNLIGRGGFGSVYKA-RLGDGMEVAVKVF----NLQCGRAFKSFAVECEMMKSIRHRNLI 551
+IG GGFG VY+A +GD EVAVK + + ++ E ++ ++H N+I
Sbjct: 12 EEIIGIGGFGKVYRAFWIGD--EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
+ C E LV+E+ G L + L DI +N + +A + YLH +
Sbjct: 70 ALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHDEAIV 127
Query: 612 PVIHCDLKPDNVLLDD--------NLVAYLSDFGIAK 640
P+IH DLK N+L+ N + ++DFG+A+
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 9/158 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RAFKSFAVECEMMKS 544
ATN S + ++G G FG V RL E++V + L+ G + + F E +M
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
H N+I++ + + +V EY +GSL+ +L + + Q + ++ +AS ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
L +H DL N+L++ NLV +SDFG++++L
Sbjct: 163 L---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 11/159 (6%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RAFKSFAVECEMMKS 544
ATN S + ++G G FG V RL E++V + L+ G + + F E +M
Sbjct: 15 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
H N+I++ + + +V EY +GSL+ +L + + Q + ++ +AS ++Y
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 605 L-HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
L G +H DL N+L++ NLV +SDFG++++L
Sbjct: 134 LSDMG----YVHRDLAARNILINSNLVCKVSDFGLSRVL 168
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 9/158 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RAFKSFAVECEMMKS 544
ATN S + ++G G FG V RL E++V + L+ G + + F E +M
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
H N+I++ + + +V EY +GSL+ +L + + Q + ++ +AS ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
L +H DL N+L++ NLV +SDFG++++L
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 492 NGFSENNLIGRGGFGSVYKARLG-DG--MEVAVKVFNLQCGRA-FKSFAVECEMMKSI-R 546
N ++IG G FG V KAR+ DG M+ A+K + + FA E E++ +
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 547 HRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---------------LDIFQR 591
H N+I ++ +C + + L +EY PHG+L +L S + L Q
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 592 LNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
L+ DVA ++YL IH +L N+L+ +N VA ++DFG+++
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 9/158 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RAFKSFAVECEMMKS 544
ATN S + ++G G FG V RL E++V + L+ G + + F E +M
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
H N+I++ + + +V EY +GSL+ +L + + Q + ++ +AS ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
L +H DL N+L++ NLV +SDFG++++L
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 9/158 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RAFKSFAVECEMMKS 544
ATN S + ++G G FG V RL E++V + L+ G + + F E +M
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
H N+I++ + + +V EY +GSL+ +L + + Q + ++ +AS ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
L +H DL N+L++ NLV +SDFG++++L
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 489 RATNGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKSFAVE 538
R F E +L +G+G FGSV R L D G VAVK + F E
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 62
Query: 539 CEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI 596
E++KS++H N++K C + + L++EY P+GSL YL +D + L
Sbjct: 63 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 122
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ +EYL IH +L N+L+++ + DFG+ K+L
Sbjct: 123 QICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVL 165
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RAFKSFAVECEMMKS 544
ATN S + ++G G FG V RL E++V + L+ G + + F E +M
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
H N+I++ + + +V EY +GSL+ +L + + Q + ++ +AS ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
L +H DL N+L++ NLV +SDFG+ ++L
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL 197
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 9/158 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RAFKSFAVECEMMKS 544
ATN S + ++G G FG V RL E++V + L+ G + + F E +M
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
H N+I++ + + +V EY +GSL+ +L + + Q + ++ +AS ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
L +H DL N+L++ NLV +SDFG++++L
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 11/159 (6%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RAFKSFAVECEMMKS 544
ATN S + ++G G FG V RL E++V + L+ G + + F E +M
Sbjct: 42 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 100
Query: 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
H N+I++ + + +V EY +GSL+ +L + + Q + ++ +AS ++Y
Sbjct: 101 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 160
Query: 605 L-HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
L G +H DL N+L++ NLV +SDFG++++L
Sbjct: 161 LSDMG----YVHRDLAARNILINSNLVCKVSDFGLSRVL 195
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKS-FAVECEMMKSIRHRNLIKVISSC 557
IGRG FG V+ RL D VAVK K+ F E ++K H N++++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 558 SNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
+ ++ +V+E G +L + L + L ++ D A+ +EYL C IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRD 238
Query: 618 LKPDNVLLDDNLVAYLSDFGIAK 640
L N L+ + V +SDFG+++
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSR 261
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKS-FAVECEMMKSIRHRNLIKVISSC 557
IGRG FG V+ RL D VAVK K+ F E ++K H N++++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 558 SNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
+ ++ +V+E G +L + L + L ++ D A+ +EYL C IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRD 238
Query: 618 LKPDNVLLDDNLVAYLSDFGIAK 640
L N L+ + V +SDFG+++
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSR 261
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 19/161 (11%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKV 553
+++ +IG G FG VY+A+L D E+ V + + G+AFK+ E ++M+ + H N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQGKAFKN--RELQIMRKLDHCNIVRL 78
Query: 554 I------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
+E + LVL+Y P + Y + + I+ +L M + +L Y
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 137
Query: 605 LH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 19/161 (11%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKV 553
+++ +IG G FG VY+A+L D E+ V + + G+AFK+ E ++M+ + H N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQGKAFKN--RELQIMRKLDHCNIVRL 78
Query: 554 I------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
+E + LVL+Y P + Y + + I+ +L M + +L Y
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 137
Query: 605 LH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 19/161 (11%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKV 553
+++ +IG G FG VY+A+L D E+ V + + G+AFK+ E ++M+ + H N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQGKAFKN--RELQIMRKLDHCNIVRL 78
Query: 554 I------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
+E + LVL+Y P + Y + + I+ +L M + +L Y
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 137
Query: 605 LH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 19/175 (10%)
Query: 483 SYLELCRATNGFSEN---------NLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG-- 529
+Y E RA F+ +IG G G V RL +V V + L+ G
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 530 -RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDI 588
R + F E +M H N+I++ + +V EY +GSL+ +L + + I
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 589 FQRLNIMIDVASALEYL-HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
Q + ++ V + + YL G +H DL NVL+D NLV +SDFG++++L
Sbjct: 151 MQLVGMLRGVGAGMRYLSDLG----YVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559
IG G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLK 619
+ LV E+ HG L YL + + L + +DV + YL C VIH DL
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 133
Query: 620 PDNVLLDDNLVAYLSDFGIAKLLIGED 646
N L+ +N V +SDFG+ + ++ +
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFVLDDQ 160
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559
IG G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLK 619
+ LV E+ HG L YL + + L + +DV + YL C VIH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 130
Query: 620 PDNVLLDDNLVAYLSDFGIAKLLIGED 646
N L+ +N V +SDFG+ + ++ +
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLDDQ 157
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559
IG G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLK 619
+ LV E+ HG L YL + + L + +DV + YL C VIH DL
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 128
Query: 620 PDNVLLDDNLVAYLSDFGIAKLLIGED 646
N L+ +N V +SDFG+ + ++ +
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVLDDQ 155
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 19/175 (10%)
Query: 483 SYLELCRATNGFSEN---------NLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG-- 529
+Y E RA F+ +IG G G V RL +V V + L+ G
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 530 -RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDI 588
R + F E +M H N+I++ + +V EY +GSL+ +L + + I
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 589 FQRLNIMIDVASALEYL-HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
Q + ++ V + + YL G +H DL NVL+D NLV +SDFG++++L
Sbjct: 151 MQLVGMLRGVGAGMRYLSDLG----YVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 77/143 (53%), Gaps = 10/143 (6%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
+ + A+V ++ SL +L++S ++ + ++I A ++YLH +IH
Sbjct: 89 STKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHR 144
Query: 617 DLKPDNVLLDDNLVAYLSDFGIA 639
DLK +N+ L ++ + DFG+A
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RAFKSFAVECEMMKS 544
ATN S + ++G G FG V RL E++V + L+ G + + F E +M
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
H N+I++ + + +V E +GSL+ +L + + Q + ++ +AS ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 605 L-HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
L G +H DL N+L++ NLV +SDFG++++L
Sbjct: 163 LSDMGA----VHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
+ + A+V ++ SL +L+ ++ + ++I A ++YLH +IH
Sbjct: 78 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 133
Query: 617 DLKPDNVLLDDNLVAYLSDFGIAKL 641
DLK +N+ L ++L + DFG+A +
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATV 158
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 76/143 (53%), Gaps = 10/143 (6%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
+ + A+V ++ SL +L+ ++ + ++I A ++YLH +IH
Sbjct: 101 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 156
Query: 617 DLKPDNVLLDDNLVAYLSDFGIA 639
DLK +N+ L ++L + DFG+A
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559
IG G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLK 619
+ LV E+ HG L YL + + L + +DV + YL C VIH DL
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 131
Query: 620 PDNVLLDDNLVAYLSDFGIAKLLIGED 646
N L+ +N V +SDFG+ + ++ +
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFVLDDQ 158
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
+ + A+V ++ SL +L++S ++ + ++I A ++YLH +IH
Sbjct: 77 STKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHR 132
Query: 617 DLKPDNVLLDDNLVAYLSDFGIAKL 641
DLK +N+ L ++ + DFG+A +
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATV 157
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 76/143 (53%), Gaps = 10/143 (6%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
+ + A+V ++ SL +L+ ++ + ++I A ++YLH +IH
Sbjct: 73 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 128
Query: 617 DLKPDNVLLDDNLVAYLSDFGIA 639
DLK +N+ L ++L + DFG+A
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
+ + A+V ++ SL +L+ ++ + ++I A ++YLH +IH
Sbjct: 78 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 133
Query: 617 DLKPDNVLLDDNLVAYLSDFGIAKL 641
DLK +N+ L ++L + DFG+A +
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATV 158
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 76/143 (53%), Gaps = 10/143 (6%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 36 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
+ + A+V ++ SL +L+ ++ + ++I A ++YLH +IH
Sbjct: 93 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 148
Query: 617 DLKPDNVLLDDNLVAYLSDFGIA 639
DLK +N+ L ++L + DFG+A
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
+ + A+V ++ SL +L+ ++ + ++I A ++YLH +IH
Sbjct: 101 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 156
Query: 617 DLKPDNVLLDDNLVAYLSDFGIAKL 641
DLK +N+ L ++L + DFG+A +
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATV 181
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
+ + A+V ++ SL +L+ ++ + ++I A ++YLH +IH
Sbjct: 75 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 130
Query: 617 DLKPDNVLLDDNLVAYLSDFGIAKL 641
DLK +N+ L ++L + DFG+A +
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATV 155
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
+ + A+V ++ SL +L+ ++ + ++I A ++YLH +IH
Sbjct: 73 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 128
Query: 617 DLKPDNVLLDDNLVAYLSDFGIAKL 641
DLK +N+ L ++L + DFG+A +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATV 153
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 76/143 (53%), Gaps = 10/143 (6%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 43 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
+ + A+V ++ SL +L+ ++ + ++I A ++YLH +IH
Sbjct: 100 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 155
Query: 617 DLKPDNVLLDDNLVAYLSDFGIA 639
DLK +N+ L ++L + DFG+A
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLA 178
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RAFKSFAVECEMMKS 544
ATN S + ++G G FG V RL E++V + L+ G + + F E +M
Sbjct: 15 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
H N+I++ + + +V E +GSL+ +L + + Q + ++ +AS ++Y
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 605 L-HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
L G +H DL N+L++ NLV +SDFG++++L
Sbjct: 134 LSDMG----YVHRDLAARNILINSNLVCKVSDFGLSRVL 168
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559
IG G FG V+ + +VA+K + + F E E+M + H L+++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLK 619
+ LV E+ HG L YL + + L + +DV + YL C VIH DL
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 150
Query: 620 PDNVLLDDNLVAYLSDFGIAKLLIGED 646
N L+ +N V +SDFG+ + ++ +
Sbjct: 151 ARNCLVGENQVIKVSDFGMTRFVLDDQ 177
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH L+++ + S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 559 NEEFKALVLEYKPHGSLEKYLY-SSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V EY GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 333 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 388
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ N+L+ +NLV ++DFG+A+L+
Sbjct: 389 LRAANILVGENLVCKVADFGLARLI 413
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RAFKSFAVECEMMKS 544
ATN S + ++G G FG V RL E++V + L+ G + + F E +M
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
H N+I++ + + +V E +GSL+ +L + + Q + ++ +AS ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
L +H DL N+L++ NLV +SDFG++++L
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
+ + A+V ++ SL +L+ ++ + ++I A ++YLH +IH
Sbjct: 73 STAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 128
Query: 617 DLKPDNVLLDDNLVAYLSDFGIAKL 641
DLK +N+ L ++L + DFG+A +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATV 153
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNC-ILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V EY P+G+L YL N + L + ++SA+EYL IH D
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRD 155
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
L N L+ +N V ++DFG+++L+ G+
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRLMTGD 183
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH L+++ + S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 559 NEEFKALVLEYKPHGSLEKYLY-SSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V EY GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 74 EEPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 129
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ N+L+ +NLV ++DFG+A+L+
Sbjct: 130 LRAANILVGENLVCKVADFGLARLI 154
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 77/143 (53%), Gaps = 10/143 (6%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
+ + A+V ++ SL +L++S ++ + ++I A ++YLH +IH
Sbjct: 89 STAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHR 144
Query: 617 DLKPDNVLLDDNLVAYLSDFGIA 639
DLK +N+ L ++ + DFG+A
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 559 NEEFKALVLEYKPHGSLEKYLY-SSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V EY GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 250 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ N+L+ +NLV ++DFG+A+L+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI 330
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 559 NEEFKALVLEYKPHGSLEKYLY-SSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V EY GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 250 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ N+L+ +NLV ++DFG+A+L+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI 330
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G+G FG V+ VA+K L+ G + ++F E ++MK IRH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 559 NEEFKALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V EY GSL +L L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ N+L+ +NLV ++DFG+A+L+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI 164
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 559 NEEFKALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V+EY GSL +L L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ N+L+ +NLV ++DFG+A+L+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI 164
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 559 NEEFKALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V+EY GSL +L L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ N+L+ +NLV ++DFG+A+L+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI 164
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH L+++ + S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 559 NEEFKALVLEYKPHGSLEKYLY-SSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V EY GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 77 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 132
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ N+L+ +NLV ++DFG+A+L+
Sbjct: 133 LRAANILVGENLVCKVADFGLARLI 157
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 16/164 (9%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNL-------QCGRAFKSFAVECEM 541
A N IG+GGFG V+K RL D VA+K L + F+ F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 542 MKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 601
M ++ H N++K+ N +V+E+ P G L L + +L +M+D+A
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 602 LEYLHFGCLAPVIHCDLKPDNVL---LDDN--LVAYLSDFGIAK 640
+EY+ P++H DL+ N+ LD+N + A ++DFG+++
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 500 IGRGGFGSVY-----KARLGDGMEVAVKVFNLQCGRAFKS-FAVECEMMKSIRHRNLIKV 553
+G G FG V G G VAVK CG +S + E E+++++ H +++K
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 554 ISSCSNEEFKA--LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
C ++ K+ LV+EY P GSL YL +C+ + Q L + + YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCV-GLAQLLLFAQQICEGMAYLH---AQ 130
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
IH L NVLLD++ + + DFG+AK
Sbjct: 131 HYIHRALAARNVLLDNDRLVKIGDFGLAK 159
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559
IG G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLK 619
+ LV E+ HG L YL + + L + +DV + YL A VIH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLA 130
Query: 620 PDNVLLDDNLVAYLSDFGIAKLLIGED 646
N L+ +N V +SDFG+ + ++ +
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLDDQ 157
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 500 IGRGGFGSVY-----KARLGDGMEVAVKVFNLQCGRAFKS-FAVECEMMKSIRHRNLIKV 553
+G G FG V G G VAVK CG +S + E E+++++ H +++K
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 554 ISSCSNEEFKA--LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
C ++ K+ LV+EY P GSL YL +C+ + Q L + + YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCV-GLAQLLLFAQQICEGMAYLH---AQ 131
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
IH L NVLLD++ + + DFG+AK
Sbjct: 132 HYIHRALAARNVLLDNDRLVKIGDFGLAK 160
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 500 IGRGGFGSVY-----KARLGDGMEVAVKVFNLQCGRAFKS-FAVECEMMKSIRHRNLIKV 553
+G G FG V G G VAVK CG +S + E ++++++ H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 554 ISSCSNEEFKAL--VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
C ++ K+L V+EY P GSL YL + + + Q L + + YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQ 136
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
IH +L NVLLD++ + + DFG+AK
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 559 NEEFKALVLEYKPHGSLEKYLY-SSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V EY GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 250 EEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ N+L+ +NLV ++DFG+A+L+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI 330
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 559 NEEFKALVLEYKPHGSLEKYLY-SSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V EY GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 81 EEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRD 136
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ N+L+ +NLV ++DFG+A+L+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLI 161
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH L+++ + S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 559 NEEFKALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V EY GSL +L L + Q +++ +AS + Y+ +H D
Sbjct: 73 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 128
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ N+L+ +NLV ++DFG+A+L+
Sbjct: 129 LRAANILVGENLVCKVADFGLARLI 153
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 559 NEEFKALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V EY GSL +L L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ N+L+ +NLV ++DFG+A+L+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI 164
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 500 IGRGGFGSVY-----KARLGDGMEVAVKVFNLQCGRAFKS-FAVECEMMKSIRHRNLIKV 553
+G G FG V G G VAVK CG +S + E ++++++ H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 554 ISSCSNEEFKAL--VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
C ++ K+L V+EY P GSL YL + + + Q L + + YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHS---Q 136
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
IH +L NVLLD++ + + DFG+AK
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 11/146 (7%)
Query: 504 GFGSVYKARLGD----GMEVAVKVFNLQCGRAFK---SFAVECEMMKSIRHRNLIKVISS 556
G G+ K ++G+ G +VAVK+ N Q R+ E + +K RH ++IK+
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
S +V+EY G L Y+ + ++ R + + SA++Y H V+H
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM---VVHR 135
Query: 617 DLKPDNVLLDDNLVAYLSDFGIAKLL 642
DLKP+NVLLD ++ A ++DFG++ ++
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMM 161
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 559 NEEFKALVLEYKPHGSLEKYLY-SSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V EY GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 81 EEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRD 136
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ N+L+ +NLV ++DFG+A+L+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLI 161
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 16/164 (9%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNL-------QCGRAFKSFAVECEM 541
A N IG+GGFG V+K RL D VA+K L + F+ F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 542 MKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 601
M ++ H N++K+ N +V+E+ P G L L + +L +M+D+A
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 602 LEYLHFGCLAPVIHCDLKPDNVL---LDDN--LVAYLSDFGIAK 640
+EY+ P++H DL+ N+ LD+N + A ++DFG ++
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ 177
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH L+++ + S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 559 NEEFKALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V EY GSL +L L + Q +++ +AS + Y+ +H D
Sbjct: 75 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 130
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ N+L+ +NLV ++DFG+A+L+
Sbjct: 131 LRAANILVGENLVCKVADFGLARLI 155
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 11/146 (7%)
Query: 504 GFGSVYKARLGD----GMEVAVKVFNLQCGRAFK---SFAVECEMMKSIRHRNLIKVISS 556
G G+ K ++G+ G +VAVK+ N Q R+ E + +K RH ++IK+
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
S +V+EY G L Y+ + ++ R + + SA++Y H V+H
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM---VVHR 135
Query: 617 DLKPDNVLLDDNLVAYLSDFGIAKLL 642
DLKP+NVLLD ++ A ++DFG++ ++
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMM 161
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 21/162 (12%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
+++ +IG G FG VY+A+L D E VA+K LQ R FK+ E ++M+ + H N+++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKN--RELQIMRKLDHCNIVR 115
Query: 553 VI------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 603
+ +E + LVL+Y P + Y + + I+ +L M + +L
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 174
Query: 604 YLH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
Y+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 175 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 212
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 559 NEEFKALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V EY GSL +L L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ N+L+ +NLV ++DFG+A+L+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI 164
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 467 PSNDANMPLVATWRTFSYLELCRATNGFSENNLIGRGGFGSVYKA-RLGDG----MEVAV 521
PS A P A R EL R ++G G FG+VYK + +G + VA+
Sbjct: 22 PSGTA--PNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAI 72
Query: 522 KVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLY 580
K+ N G +A F E +M S+ H +L++++ C + + LV + PHG L +Y++
Sbjct: 73 KILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVH 131
Query: 581 SSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+ LN + +A + YL L +H DL NVL+ ++DFG+A+
Sbjct: 132 EHKDNIGSQLLLNWCVQIAKGMMYLEERRL---VHRDLAARNVLVKSPNHVKITDFGLAR 188
Query: 641 LLIGED 646
LL G++
Sbjct: 189 LLEGDE 194
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 21/162 (12%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
+++ +IG G FG VY+A+L D E VA+K LQ R FK+ E ++M+ + H N+++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKN--RELQIMRKLDHCNIVR 156
Query: 553 VI------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 603
+ +E + LVL+Y P + Y + + I+ +L M + +L
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 215
Query: 604 YLH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
Y+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 216 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 253
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 21/162 (12%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
+++ +IG G FG VY+A+L D E VA+K LQ R FK+ E ++M+ + H N+++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKN--RELQIMRKLDHCNIVR 82
Query: 553 VI------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 603
+ +E + LVL+Y P + Y + + I+ +L M + +L
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 141
Query: 604 YLH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
Y+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 142 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 179
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 30/171 (17%)
Query: 500 IGRGGFGSVYKAR------LGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKV 553
+G G FG V+ A D M VAVK A K F E E++ +++H +++K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 554 ISSCSNEEFKALVLEYKPHGSLEKYLYS---------------SNCILDIFQRLNIMIDV 598
C + + +V EY HG L K+L + + L + Q L+I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 599 ASALEYL---HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
AS + YL HF +H DL N L+ NL+ + DFG+++ + D
Sbjct: 143 ASGMVYLASQHF------VHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD 187
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 21/162 (12%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
+++ +IG G FG VY+A+L D E VA+K LQ R FK+ E ++M+ + H N+++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKN--RELQIMRKLDHCNIVR 113
Query: 553 VI------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 603
+ +E + LVL+Y P + Y + + I+ +L M + +L
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 172
Query: 604 YLH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
Y+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 173 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 210
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 21/162 (12%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
+++ +IG G FG VY+A+L D E VA+K LQ R FK+ E ++M+ + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKN--RELQIMRKLDHCNIVR 111
Query: 553 VI------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 603
+ +E + LVL+Y P + Y + + I+ +L M + +L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 170
Query: 604 YLH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
Y+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 171 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 21/162 (12%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
+++ +IG G FG VY+A+L D E VA+K LQ R FK+ E ++M+ + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKN--RELQIMRKLDHCNIVR 111
Query: 553 VI------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 603
+ +E + LVL+Y P + Y + + I+ +L M + +L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 170
Query: 604 YLH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
Y+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 171 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 8/149 (5%)
Query: 498 NLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFK---SFAVECEMMKSIRHRNLIKV 553
+ +G G FG V + G +VAVK+ N Q R+ E + +K RH ++IK+
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 554 ISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPV 613
S +V+EY G L Y+ N LD + + + S ++Y H V
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHRHM---V 137
Query: 614 IHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+H DLKP+NVLLD ++ A ++DFG++ ++
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMM 166
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 21/162 (12%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
+++ +IG G FG VY+A+L D E VA+K LQ R FK+ E ++M+ + H N+++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKN--RELQIMRKLDHCNIVR 105
Query: 553 VI------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 603
+ +E + LVL+Y P + Y + + I+ +L M + +L
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 164
Query: 604 YLH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
Y+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 165 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 202
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 8/149 (5%)
Query: 499 LIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRHRNLIKV 553
+IG G FG V + RL E V + L+ G R + F E +M H N+I++
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 554 ISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPV 613
+N ++ E+ +G+L+ +L ++ + Q + ++ +AS + YL
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSY 139
Query: 614 IHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+H DL N+L++ NLV +SDFG+++ L
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFL 168
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 79/153 (51%), Gaps = 16/153 (10%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLHFGCLAP 612
E +++E+ +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLEKKNF-- 133
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
IH DL N L+ +N + ++DFG+++L+ G+
Sbjct: 134 -IHRDLAARNCLVGENHLVKVADFGLSRLMTGD 165
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 559 NEEFKALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V+EY G L +L L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ N+L+ +NLV ++DFG+A+L+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI 164
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 486 ELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI 545
E+ R T E +G G FG V+ +VAVK Q + +F E +MK +
Sbjct: 18 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 74
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 604
+H+ L+++ + + E ++ EY +GSL +L + + I L I + L++ +A + +
Sbjct: 75 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 133
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ IH DL+ N+L+ D L ++DFG+A+L+
Sbjct: 134 IEERNY---IHRDLRAANILVSDTLSCKIADFGLARLI 168
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 486 ELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI 545
E+ R T E +G G FG V+ +VAVK Q + +F E +MK +
Sbjct: 11 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 67
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 604
+H+ L+++ + + E ++ EY +GSL +L + + I L I + L++ +A + +
Sbjct: 68 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 126
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ IH DL+ N+L+ D L ++DFG+A+L+
Sbjct: 127 IEERNY---IHRDLRAANILVSDTLSCKIADFGLARLI 161
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 79/153 (51%), Gaps = 16/153 (10%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLHFGCLAP 612
E +++E+ +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLEKKNF-- 137
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
IH DL N L+ +N + ++DFG+++L+ G+
Sbjct: 138 -IHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 21/162 (12%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
+++ +IG G FG VY+A+L D E VA+K LQ R FK+ E ++M+ + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKN--RELQIMRKLDHCNIVR 89
Query: 553 VI------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 603
+ +E + LVL+Y P + Y + + I+ +L M + +L
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 148
Query: 604 YLH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
Y+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 149 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 186
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 486 ELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI 545
E+ R T E +G G FG V+ +VAVK Q + +F E +MK +
Sbjct: 15 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 71
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 604
+H+ L+++ + + E ++ EY +GSL +L + + I L I + L++ +A + +
Sbjct: 72 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 130
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ IH DL+ N+L+ D L ++DFG+A+L+
Sbjct: 131 IEERNY---IHRDLRAANILVSDTLSCKIADFGLARLI 165
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 21/162 (12%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
+++ +IG G FG VY+A+L D E VA+K LQ R FK+ E ++M+ + H N+++
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKN--RELQIMRKLDHCNIVR 85
Query: 553 VI------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 603
+ +E + LVL+Y P + Y + + I+ +L M + +L
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 144
Query: 604 YLH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
Y+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 145 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 182
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 486 ELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI 545
E+ R T E +G G FG V+ +VAVK Q + +F E +MK +
Sbjct: 17 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 73
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 604
+H+ L+++ + + E ++ EY +GSL +L + + I L I + L++ +A + +
Sbjct: 74 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 132
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ IH DL+ N+L+ D L ++DFG+A+L+
Sbjct: 133 IEERNY---IHRDLRAANILVSDTLSCKIADFGLARLI 167
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 21/162 (12%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
+++ +IG G FG VY+A+L D E VA+K LQ R FK+ E ++M+ + H N+++
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKN--RELQIMRKLDHCNIVR 96
Query: 553 VI------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 603
+ +E + LVL+Y P + Y + + I+ +L M + +L
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 155
Query: 604 YLH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
Y+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 156 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 193
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 497 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRHRNLI 551
+IG G FG V + RL E V + L+ G R + F E +M H N+I
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
++ +N ++ E+ +G+L+ +L ++ + Q + ++ +AS + YL
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEM 135
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+H DL N+L++ NLV +SDFG+++ L
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRFL 166
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 21/162 (12%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
+++ +IG G FG VY+A+L D E VA+K LQ R FK+ E ++M+ + H N+++
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKN--RELQIMRKLDHCNIVR 90
Query: 553 VI------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 603
+ +E + LVL+Y P + Y + + I+ +L M + +L
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 149
Query: 604 YLH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
Y+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 150 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 187
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 19/161 (11%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKV 553
+++ +IG G FG VY+A+L D E+ LQ R FK+ E ++M+ + H N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FKN--RELQIMRKLDHCNIVRL 78
Query: 554 I------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
+E + LVL+Y P + Y + + I+ +L M + +L Y
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 137
Query: 605 LH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 21/162 (12%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
+++ +IG G FG VY+A+L D E VA+K LQ R FK+ E ++M+ + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKN--RELQIMRKLDHCNIVR 89
Query: 553 VI------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 603
+ +E + LVL+Y P + Y + + I+ +L M + +L
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 148
Query: 604 YLH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
Y+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 149 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 186
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH L+++ + S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 559 NEEFKALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V EY GSL +L L + Q +++ +AS + Y+ +H D
Sbjct: 251 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 306
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ N+L+ +NLV ++DFG+ +L+
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLI 331
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 19/161 (11%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKV 553
+++ +IG G FG VY+A+L D E+ LQ R FK+ E ++M+ + H N++++
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FKN--RELQIMRKLDHCNIVRL 79
Query: 554 I------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
+E + LVL+Y P + Y + + I+ +L M + +L Y
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 138
Query: 605 LH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 139 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 175
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 486 ELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI 545
E+ R T E +G G FG V+ +VAVK Q + +F E +MK +
Sbjct: 19 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 75
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 604
+H+ L+++ + + E ++ EY +GSL +L + + I L I + L++ +A + +
Sbjct: 76 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 134
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ IH DL+ N+L+ D L ++DFG+A+L+
Sbjct: 135 IEERNY---IHRDLRAANILVSDTLSCKIADFGLARLI 169
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 486 ELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI 545
E+ R T E +G G FG V+ +VAVK Q + +F E +MK +
Sbjct: 9 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 65
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 604
+H+ L+++ + + E ++ EY +GSL +L + + I L I + L++ +A + +
Sbjct: 66 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ IH DL+ N+L+ D L ++DFG+A+L+
Sbjct: 125 IEERNY---IHRDLRAANILVSDTLSCKIADFGLARLI 159
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 21/162 (12%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
+++ +IG G FG VY+A+L D E VA+K LQ R FK+ E ++M+ + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKN--RELQIMRKLDHCNIVR 77
Query: 553 VI------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 603
+ +E + LVL+Y P + Y + + I+ +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 604 YLH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
Y+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 19/161 (11%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKV 553
+++ +IG G FG VY+A+L D E+ LQ R FK+ E ++M+ + H N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FKN--RELQIMRKLDHCNIVRL 78
Query: 554 I------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
+E + LVL+Y P + Y + + I+ +L M + +L Y
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 137
Query: 605 LH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 486 ELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI 545
E+ R T E +G G FG V+ +VAVK Q + +F E +MK +
Sbjct: 9 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 65
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 604
+H+ L+++ + + E ++ EY +GSL +L + + I L I + L++ +A + +
Sbjct: 66 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ IH DL+ N+L+ D L ++DFG+A+L+
Sbjct: 125 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI 159
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 486 ELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI 545
E+ R T E +G G FG V+ +VAVK Q + +F E +MK +
Sbjct: 10 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 66
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 604
+H+ L+++ + + E ++ EY +GSL +L + + I L I + L++ +A + +
Sbjct: 67 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 125
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ IH DL+ N+L+ D L ++DFG+A+L+
Sbjct: 126 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI 160
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 19/161 (11%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKV 553
+++ +IG G FG VY+A+L D E+ LQ R FK+ E ++M+ + H N++++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FKN--RELQIMRKLDHCNIVRL 82
Query: 554 I------SSCSNEEFKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
+E + LVL+Y P + Y + + I+ +L M + +L Y
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 141
Query: 605 LH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 142 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 178
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 486 ELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI 545
E+ R T E +G G FG V+ +VAVK Q + +F E +MK +
Sbjct: 15 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 71
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 604
+H+ L+++ + + E ++ EY +GSL +L + + I L I + L++ +A + +
Sbjct: 72 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 130
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ IH DL+ N+L+ D L ++DFG+A+L+
Sbjct: 131 IEERNY---IHRDLRAANILVSDTLSCKIADFGLARLI 165
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 486 ELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI 545
E+ R T E +G G FG V+ +VAVK Q + +F E +MK +
Sbjct: 14 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 70
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 604
+H+ L+++ + + E ++ EY +GSL +L + + I L I + L++ +A + +
Sbjct: 71 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 129
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ IH DL+ N+L+ D L ++DFG+A+L+
Sbjct: 130 IEERNY---IHRDLRAANILVSDTLSCKIADFGLARLI 164
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 486 ELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI 545
E+ R T E +G G FG V+ +VAVK Q + +F E +MK +
Sbjct: 9 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 65
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 604
+H+ L+++ + + E ++ EY +GSL +L + + I L I + L++ +A + +
Sbjct: 66 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ IH DL+ N+L+ D L ++DFG+A+L+
Sbjct: 125 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI 159
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 559 NEEFKALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V EY GSL +L L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L N+L+ +NLV ++DFG+A+L+
Sbjct: 140 LAAANILVGENLVCKVADFGLARLI 164
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 497 NNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVIS 555
+ +G G FG VY+ + VAVK + + F E +MK I+H NL++++
Sbjct: 16 KHKLGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 556 SCSNEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCLAPVI 614
C+ E ++ E+ +G+L YL N + L + ++SA+EYL I
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFI 131
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
H DL N L+ +N + ++DFG+++L+ G+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGD 162
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 12/163 (7%)
Query: 489 RATNGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMM 542
+ F ++G G F +V AR L E A+K+ L+ K V E ++M
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVM 64
Query: 543 KSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASAL 602
+ H +K+ + ++E L Y +G L KY+ + R ++ SAL
Sbjct: 65 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 123
Query: 603 EYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
EYLH +IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 124 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 163
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 12/145 (8%)
Query: 500 IGRGGFGSVYKARLGD--GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSC 557
IG+G FG V LGD G +VAVK ++ ++F E +M +RH NL++++
Sbjct: 20 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 558 SNEEFK-ALVLEYKPHGSLEKYLYS-SNCILDIFQRLNIMIDVASALEYLHFGCLAPVIH 615
E+ +V EY GSL YL S +L L +DV A+EYL +H
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF---VH 131
Query: 616 CDLKPDNVLLDDNLVAYLSDFGIAK 640
DL NVL+ ++ VA +SDFG+ K
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTK 156
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMMKSIRH 547
F ++G G F +V AR L E A+K+ L+ K V E ++M + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 150
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 497 NNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVIS 555
+ +G G +G VY+ + VAVK + + F E +MK I+H NL++++
Sbjct: 16 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 556 SCSNEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCLAPVI 614
C+ E +++E+ +G+L YL N + L + ++SA+EYL I
Sbjct: 75 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFI 131
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
H DL N L+ +N + ++DFG+++L+ G+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGD 162
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMMKSIRH 547
F ++G G F +V AR L E A+K+ L+ K V E ++M + H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 153
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 154 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 188
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 498 NLIGRGGFGSVYKA-RLGDG----MEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLI 551
++G G FG+VYK + +G + VA+K+ N G +A F E +M S+ H +L+
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
+++ C + + LV + PHG L +Y++ + LN + +A + YL L
Sbjct: 81 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRL- 138
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
+H DL NVL+ ++DFG+A+LL G++
Sbjct: 139 --VHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 171
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 486 ELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI 545
E+ R T E +G G FG V+ +VAVK Q + +F E +MK +
Sbjct: 4 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 60
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 604
+H+ L+++ + + E ++ EY +GSL +L + + I L I + L++ +A + +
Sbjct: 61 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 119
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ IH DL+ N+L+ D L ++DFG+A+L+
Sbjct: 120 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI 154
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 6/148 (4%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +++E+ +G+L YL N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
L N L+ +N + ++DFG+++L+ G+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGD 164
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 16/164 (9%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNL-------QCGRAFKSFAVECEM 541
A N IG+GGFG V+K RL D VA+K L + F+ F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 542 MKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 601
M ++ H N++K+ N +V+E+ P G L L + +L +M+D+A
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 602 LEYLHFGCLAPVIHCDLKPDNVL---LDDN--LVAYLSDFGIAK 640
+EY+ P++H DL+ N+ LD+N + A ++DF +++
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ 177
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 27/168 (16%)
Query: 500 IGRGGFGSVYKARL------GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKV 553
+G G FG V+ A D + VAVK A K F E E++ +++H +++K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 554 ISSCSNEEFKALVLEYKPHGSLEKYLYSSN------------CILDIFQRLNIMIDVASA 601
C + +V EY HG L K+L + L Q L+I +A+
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 602 LEYL---HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
+ YL HF +H DL N L+ +NL+ + DFG+++ + D
Sbjct: 141 MVYLASQHF------VHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD 182
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 12/145 (8%)
Query: 500 IGRGGFGSVYKARLGD--GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSC 557
IG+G FG V LGD G +VAVK ++ ++F E +M +RH NL++++
Sbjct: 29 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 558 SNEEFK-ALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIH 615
E+ +V EY GSL YL S +L L +DV A+EYL +H
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF---VH 140
Query: 616 CDLKPDNVLLDDNLVAYLSDFGIAK 640
DL NVL+ ++ VA +SDFG+ K
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTK 165
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMMKSIRH 547
F ++G G F +V AR L E A+K+ L+ K V E ++M + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 150
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMMKSIRH 547
F ++G G F +V AR L E A+K+ L+ K V E ++M + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 150
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 6/148 (4%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +++E+ +G+L YL N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
L N L+ +N + ++DFG+++L+ G+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGD 164
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 12/163 (7%)
Query: 489 RATNGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMM 542
+ F ++G G F +V AR L E A+K+ L+ K V E ++M
Sbjct: 6 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVM 63
Query: 543 KSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASAL 602
+ H +K+ + ++E L Y +G L KY+ + R ++ SAL
Sbjct: 64 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 122
Query: 603 EYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
EYLH +IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 123 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 162
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMMKSIRH 547
F ++G G F +V AR L E A+K+ L+ K V E ++M + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 151
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 152 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 186
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 12/163 (7%)
Query: 489 RATNGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMM 542
+ F ++G G F +V AR L E A+K+ L+ K V E ++M
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVM 61
Query: 543 KSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASAL 602
+ H +K+ + ++E L Y +G L KY+ + R ++ SAL
Sbjct: 62 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 120
Query: 603 EYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
EYLH +IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 121 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 160
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMMKSIRH 547
F ++G G F +V AR L E A+K+ L+ K V E ++M + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 151
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 152 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 186
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMMKSIRH 547
F ++G G F +V AR L E A+K+ L+ K V E ++M + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 150
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG+G F V AR + G EVAVK+ + + + E +MK + H N++K+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
E+ LV+EY G + YL + + + R + SA++Y H ++H
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 130
Query: 617 DLKPDNVLLDDNLVAYLSDFGIA 639
DLK +N+LLD ++ ++DFG +
Sbjct: 131 DLKAENLLLDADMNIKIADFGFS 153
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMMKSIRH 547
F ++G G F +V AR L E A+K+ L+ K V E ++M + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 148
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 183
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 12/163 (7%)
Query: 489 RATNGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMM 542
+ F ++G G F +V AR L E A+K+ L+ K V E ++M
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVM 62
Query: 543 KSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASAL 602
+ H +K+ + ++E L Y +G L KY+ + R ++ SAL
Sbjct: 63 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 121
Query: 603 EYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
EYLH +IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 122 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 161
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 16/153 (10%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLHFGCLAP 612
E ++ E+ +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLEKKNF-- 133
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
IH DL N L+ +N + ++DFG+++L+ G+
Sbjct: 134 -IHRDLAARNCLVGENHLVKVADFGLSRLMTGD 165
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMMKSIRH 547
F ++G G F +V AR L E A+K+ L+ K V E ++M + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 150
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMMKSIRH 547
F ++G G F +V AR L E A+K+ L+ K V E ++M + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 148
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 183
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 16/153 (10%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLHFGCLAP 612
E ++ E+ +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLEKKNF-- 137
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
IH DL N L+ +N + ++DFG+++L+ G+
Sbjct: 138 -IHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 12/145 (8%)
Query: 500 IGRGGFGSVYKARLGD--GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSC 557
IG+G FG V LGD G +VAVK ++ ++F E +M +RH NL++++
Sbjct: 14 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 558 SNEEFK-ALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIH 615
E+ +V EY GSL YL S +L L +DV A+EYL +H
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF---VH 125
Query: 616 CDLKPDNVLLDDNLVAYLSDFGIAK 640
DL NVL+ ++ VA +SDFG+ K
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTK 150
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 16/153 (10%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLHFGCLAP 612
E ++ E+ +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLEKKNF-- 134
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
IH DL N L+ +N + ++DFG+++L+ G+
Sbjct: 135 -IHRDLAARNCLVGENHLVKVADFGLSRLMTGD 166
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 16/153 (10%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLHFGCLAP 612
E ++ E+ +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLEKKNF-- 137
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
IH DL N L+ +N + ++DFG+++L+ G+
Sbjct: 138 -IHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMMKSIRH 547
F ++G G F +V AR L E A+K+ L+ K V E ++M + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 148
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 183
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 16/153 (10%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLHFGCLAP 612
E ++ E+ +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLEKKNF-- 136
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
IH DL N L+ +N + ++DFG+++L+ G+
Sbjct: 137 -IHRDLAARNCLVGENHLVKVADFGLSRLMTGD 168
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG+G F V AR + G EVAVK+ + + + E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
E+ LV+EY G + YL + + + R + SA++Y H ++H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 617 DLKPDNVLLDDNLVAYLSDFGIA 639
DLK +N+LLD ++ ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 8/146 (5%)
Query: 497 NNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
++GRG FG V KA+ +VA+K + R K+F VE + + H N++K+ +
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 70
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCI--LDIFQRLNIMIDVASALEYLHFGCLAPVI 614
C N LV+EY GSL L+ + + ++ + + + YLH +I
Sbjct: 71 CLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 615 HCDLKPDNVLL-DDNLVAYLSDFGIA 639
H DLKP N+LL V + DFG A
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTA 154
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG+G F V AR + G EVAVK+ + + + E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
E+ LV+EY G + YL + + + R + SA++Y H ++H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 617 DLKPDNVLLDDNLVAYLSDFGIA 639
DLK +N+LLD ++ ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 12/145 (8%)
Query: 500 IGRGGFGSVYKARLGD--GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSC 557
IG+G FG V LGD G +VAVK ++ ++F E +M +RH NL++++
Sbjct: 201 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 558 SNEEFK-ALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIH 615
E+ +V EY GSL YL S +L L +DV A+EYL +H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF---VH 312
Query: 616 CDLKPDNVLLDDNLVAYLSDFGIAK 640
DL NVL+ ++ VA +SDFG+ K
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTK 337
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMMKSIRH 547
F ++G G F +V AR L E A+K+ L+ K V E ++M + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 150
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 16/153 (10%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLHFGCLAP 612
E ++ E+ +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLEKKNF-- 137
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
IH DL N L+ +N + ++DFG+++L+ G+
Sbjct: 138 -IHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMMKSIRH 547
F ++G G F +V AR L E A+K+ L+ K V E ++M + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 147
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 148 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 182
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMMKSIRH 547
F ++G G F +V AR L E A+K+ L+ K V E ++M + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 147
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 148 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 182
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 8/146 (5%)
Query: 497 NNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
++GRG FG V KA+ +VA+K + R K+F VE + + H N++K+ +
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 69
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCI--LDIFQRLNIMIDVASALEYLHFGCLAPVI 614
C N LV+EY GSL L+ + + ++ + + + YLH +I
Sbjct: 70 CLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 615 HCDLKPDNVLL-DDNLVAYLSDFGIA 639
H DLKP N+LL V + DFG A
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTA 153
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 16/153 (10%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLHFGCLAP 612
E ++ E+ +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 144
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
IH DL N L+ +N + ++DFG+++L+ G+
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 177
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 19/161 (11%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKV 553
+++ +IG G FG VY+A+L D E+ LQ R FK+ E ++M+ + H N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FKN--RELQIMRKLDHCNIVRL 78
Query: 554 ----ISSCSNEE--FKALVLEYKP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
SS ++ + LVL+Y P + Y + + I+ +L M + +L Y
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 137
Query: 605 LH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643
+H FG + H D+KP N+LLD D V L DFG AK L+
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 559 NEEFKALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V EY G L +L L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ N+L+ +NLV ++DFG+A+L+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI 164
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 16/153 (10%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLHFGCLAP 612
E ++ E+ +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 131
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
IH DL N L+ +N + ++DFG+++L+ G+
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 16/153 (10%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLHFGCLAP 612
E ++ E+ +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 133
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
IH DL N L+ +N + ++DFG+++L+ G+
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 166
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 16/153 (10%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLHFGCLAP 612
E ++ E+ +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLEKKNF-- 132
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
IH DL N L+ +N + ++DFG+++L+ G+
Sbjct: 133 -IHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMMKSIRH 547
F ++G G F +V AR L E A+K+ L+ K V E ++M + H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 132
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 133 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 167
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG+G F V AR + G EVAVK+ + + + E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
E+ LV+EY G + YL + + + R + SA++Y H ++H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 617 DLKPDNVLLDDNLVAYLSDFGIA 639
DLK +N+LLD ++ ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 16/153 (10%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLHFGCLAP 612
E ++ E+ +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 133
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
IH DL N L+ +N + ++DFG+++L+ G+
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 166
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 17/151 (11%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI--RHRNLIKVISSC 557
IG+G FG V++ + G EVAVK+F+ R +S+ E E+ +++ RH N++ I++
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 558 SNEEFKA----LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA-- 611
+ + LV +Y HGSL YL ++ + + + AS L +LH +
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQ 163
Query: 612 --PVI-HCDLKPDNVLLDDNLVAYLSDFGIA 639
P I H DLK N+L+ N ++D G+A
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 10/152 (6%)
Query: 498 NLIGRGGFGSVYKARLGDGMEVAVKV----FNLQCGRAFKSFAVECEMMKSIRHRNLIKV 553
++G+G FG K + EV V F+ + R +F E ++M+ + H N++K
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQR---TFLKEVKVMRCLEHPNVLKF 72
Query: 554 ISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPV 613
I ++ + EY G+L + S + QR++ D+AS + YLH +
Sbjct: 73 IGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNI 129
Query: 614 IHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
IH DL N L+ +N ++DFG+A+L++ E
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 17/151 (11%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI--RHRNLIKVISSC 557
IG+G FG V++ + G EVAVK+F+ R +S+ E E+ +++ RH N++ I++
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 558 SNEEFKA----LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA-- 611
+ + LV +Y HGSL YL ++ + + + AS L +LH +
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQ 150
Query: 612 ---PVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
+ H DLK N+L+ N ++D G+A
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E ++ E+ +G+L YL N + L + ++SA+EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF---IHRD 141
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
L N L+ +N + ++DFG+++L+ G+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGD 169
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 497 NNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVIS 555
+ +G G +G VY+ + VAVK + + F E +MK I+H NL++++
Sbjct: 16 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 556 SCSNEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCLAPVI 614
C+ E ++ E+ +G+L YL N + L + ++SA+EYL I
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFI 131
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
H DL N L+ +N + ++DFG+++L+ G+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGD 162
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E ++ E+ +G+L YL N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
L N L+ +N + ++DFG+++L+ G+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGD 164
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E ++ E+ +G+L YL N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
L N L+ +N + ++DFG+++L+ G+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGD 164
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 497 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRHRNLI 551
+IG G FG V RL E+ V + L+ G + + F E +M H N+I
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
+ + + ++ EY +GSL+ +L ++ + Q + ++ + S ++YL
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---M 150
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+H DL N+L++ NLV +SDFG++++L
Sbjct: 151 SAVHRDLAARNILVNSNLVCKVSDFGMSRVL 181
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G FG V+ + +VAVK L+ G + ++F E +MK+++H L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVK--TLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL-NIMIDVASALEYLHFGCLAPVIHCD 617
EE ++ EY GSL +L S + +L + +A + Y+ IH D
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRD 135
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ NVL+ ++L+ ++DFG+A+++
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVI 160
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVF-NLQCGRAFKSFAV-ECEMMKSIRHRNLIKVISS 556
IG G +G V+K R D G VA+K F + K A+ E M+K ++H NL+ ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQR-------LNIMIDVASALEYLH-FG 608
+ LV EY H L + LD +QR +I A+ + H
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHE--------LDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
C IH D+KP+N+L+ + V L DFG A+LL G
Sbjct: 123 C----IHRDVKPENILITKHSVIKLCDFGFARLLTG 154
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGDG-MEVAVKV-FNLQCGR--AFKSFAVECEMMKSIRH 547
+ F +G+G FG+VY AR VA+KV F Q + E E+ + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
N++++ + + L+LEY P G L K L S C D + IM ++A AL Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS-CTFDEQRTATIMEELADALMYCHG 141
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
VIH D+KP+N+LL ++DFG
Sbjct: 142 ---KKVIHRDIKPENLLLGLKGELKIADFG 168
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG+G F V AR + G EVAV++ + + + E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
E+ LV+EY G + YL + + + R + SA++Y H ++H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 617 DLKPDNVLLDDNLVAYLSDFGIA 639
DLK +N+LLD ++ ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 17/151 (11%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI--RHRNLIKVISSC 557
+G+G +G V++ G VAVK+F+ R KS+ E E+ ++ RH N++ I+S
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 558 SNEEFKA----LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH---FGCL 610
+ L+ Y GSL YL + LD L I++ +AS L +LH FG
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 611 A-PVI-HCDLKPDNVLLDDNLVAYLSDFGIA 639
P I H DLK N+L+ N ++D G+A
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA 189
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG+G F V AR + G EVAV++ + + + E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
E+ LV+EY G + YL + + + R + SA++Y H ++H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 617 DLKPDNVLLDDNLVAYLSDFGIA 639
DLK +N+LLD ++ ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 6/148 (4%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E ++ E+ +G+L YL N ++ L + ++SA+EYL IH +
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF---IHRN 340
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
L N L+ +N + ++DFG+++L+ G+
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLMTGD 368
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 17/151 (11%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI--RHRNLIKVISSC 557
IG+G FG V++ + G EVAVK+F+ R +S+ E E+ +++ RH N++ I++
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 558 SNEEFKA----LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA-- 611
+ + LV +Y HGSL YL ++ + + + AS L +LH +
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQ 130
Query: 612 ---PVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
+ H DLK N+L+ N ++D G+A
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 17/151 (11%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI--RHRNLIKVISSC 557
IG+G FG V++ + G EVAVK+F+ R +S+ E E+ +++ RH N++ I++
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 558 SNEEFKA----LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA-- 611
+ + LV +Y HGSL YL ++ + + + AS L +LH +
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQ 127
Query: 612 ---PVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
+ H DLK N+L+ N ++D G+A
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 17/151 (11%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI--RHRNLIKVISSC 557
IG+G FG V++ + G EVAVK+F+ R +S+ E E+ +++ RH N++ I++
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 558 SNEEFKA----LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA-- 611
+ + LV +Y HGSL YL ++ + + + AS L +LH +
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQ 125
Query: 612 ---PVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
+ H DLK N+L+ N ++D G+A
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLK 619
+ ++ EY +G L YL Q L + DV A+EYL +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 147
Query: 620 PDNVLLDDNLVAYLSDFGIAKLLIGED 646
N L++D V +SDFG+++ ++ ++
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDE 174
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG+G F V AR + G EVAVK+ + + + E +MK + H N++K+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
E+ LV+EY G + YL + + + R + SA++Y H ++H
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH---QKYIVHR 138
Query: 617 DLKPDNVLLDDNLVAYLSDFGIA 639
DLK +N+LLD ++ ++DFG +
Sbjct: 139 DLKAENLLLDGDMNIKIADFGFS 161
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMMKSIRH 547
F ++G G F +V AR L E A+K+ L+ K V E ++M + H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
+K+ ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 155
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 156 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 190
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLK 619
+ ++ EY +G L YL Q L + DV A+EYL +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 147
Query: 620 PDNVLLDDNLVAYLSDFGIAKLLIGED 646
N L++D V +SDFG+++ ++ ++
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDE 174
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV-----ECEMMKSIRH 547
F ++G G F + AR L E A+K+ L+ K V E ++M + H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 148
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+IH DLKP+N+LL++++ ++DFG AK+L E
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 183
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 6/148 (4%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E ++ E+ +G+L YL N ++ L + ++SA+EYL IH +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF---IHRN 382
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
L N L+ +N + ++DFG+++L+ G+
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLMTGD 410
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 497 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRHRNLI 551
+IG G FG V RL E+ V + L+ G + + F E +M H N+I
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
+ + + ++ EY +GSL+ +L ++ + Q + ++ + S ++YL
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---M 129
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+H DL N+L++ NLV +SDFG++++L
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVL 160
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +G VY+ + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E ++ E+ +G+L YL N + L + ++SA+EYL IH +
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF---IHRN 343
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
L N L+ +N + ++DFG+++L+ G+
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLMTGD 371
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 486 ELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI 545
E+ R T E +G G FG V+ +VAVK Q + +F E +MK +
Sbjct: 5 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 61
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 604
+H+ L+++ + + E ++ EY +GSL +L + + I L I + L++ +A + +
Sbjct: 62 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 120
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ IH +L+ N+L+ D L ++DFG+A+L+
Sbjct: 121 IE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLI 155
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 17/151 (11%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI--RHRNLIKVISSC 557
IG+G FG V++ + G EVAVK+F+ R +S+ E E+ +++ RH N++ I++
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 558 SNEEFKA----LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA-- 611
+ + LV +Y HGSL YL ++ + + + AS L +LH +
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQ 124
Query: 612 ---PVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
+ H DLK N+L+ N ++D G+A
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 85/174 (48%), Gaps = 17/174 (9%)
Query: 483 SYLELCRATNGFSEN---------NLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG-- 529
+Y + RA + F++ +IG G FG V RL +VAV + L+ G
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 530 -RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDI 588
+ + F E +M H N++ + + + +V+E+ +G+L+ +L + +
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV 144
Query: 589 FQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
Q + ++ +A+ + YL +H DL N+L++ NLV +SDFG+++++
Sbjct: 145 IQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVI 195
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 497 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRHRNLI 551
+IG G FG V RL E+ V + L+ G + + F E +M H N+I
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL-HFGCL 610
+ + + +V EY +GSL+ +L ++ + Q + ++ +++ ++YL G
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMG-- 144
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+H DL N+L++ NLV +SDFG++++L
Sbjct: 145 --YVHRDLAARNILINSNLVCKVSDFGLSRVL 174
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 497 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRHRNLI 551
+IG G FG V RL E+ V + L+ G + + F E +M H N+I
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
+ + + ++ EY +GSL+ +L ++ + Q + ++ + S ++YL
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---M 135
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+H DL N+L++ NLV +SDFG++++L
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVL 166
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 500 IGRGGFGSVY-----KARLGDGMEVAVKVFNLQCGRAFKS-FAVECEMMKSIRHRNLIKV 553
+G G FG V G G VAVK G +S + E ++++++ H ++IK
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 554 ISSCSNEEFKAL--VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
C + +L V+EY P GSL YL + + + Q L + + YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQ 153
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
IH DL NVLLD++ + + DFG+AK
Sbjct: 154 HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 17/151 (11%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI--RHRNLIKVISSC 557
+G+G +G V++ G VAVK+F+ R KS+ E E+ ++ RH N++ I+S
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 558 SNEEFKA----LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH---FGCL 610
+ L+ Y GSL YL + LD L I++ +AS L +LH FG
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 611 A-PVI-HCDLKPDNVLLDDNLVAYLSDFGIA 639
P I H DLK N+L+ N ++D G+A
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 17/151 (11%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI--RHRNLIKVISSC 557
+G+G +G V++ G VAVK+F+ R KS+ E E+ ++ RH N++ I+S
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 558 SNEEFKA----LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH---FGCL 610
+ L+ Y GSL YL + LD L I++ +AS L +LH FG
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 611 A-PVI-HCDLKPDNVLLDDNLVAYLSDFGIA 639
P I H DLK N+L+ N ++D G+A
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 29/170 (17%)
Query: 500 IGRGGFGSVYKARL------GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKV 553
+G G FG V+ A D M VAVK A + F E E++ ++H+++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 554 ISSCSNEEFKALVLEYKPHGSLEKYLYS--------------SNCILDIFQRLNIMIDVA 599
C+ +V EY HG L ++L S + L + Q L + VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 600 SALEY---LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
+ + Y LHF +H DL N L+ LV + DFG+++ + D
Sbjct: 169 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 212
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 24/160 (15%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAF-----KSFAVECEMMKSIRHRNLIKV 553
+G GGFG V + D G +VA+K QC + + + +E ++MK + H N++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIK----QCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 77
Query: 554 ------ISSCSNEEFKALVLEYKPHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYL 605
+ + + L +EY G L KYL + + C L ++ D++SAL YL
Sbjct: 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 137
Query: 606 HFGCLAPVIHCDLKPDNVLLD---DNLVAYLSDFGIAKLL 642
H +IH DLKP+N++L L+ + D G AK L
Sbjct: 138 HEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL 174
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 24/160 (15%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAF-----KSFAVECEMMKSIRHRNLIKV 553
+G GGFG V + D G +VA+K QC + + + +E ++MK + H N++
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIK----QCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 78
Query: 554 ------ISSCSNEEFKALVLEYKPHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYL 605
+ + + L +EY G L KYL + + C L ++ D++SAL YL
Sbjct: 79 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 138
Query: 606 HFGCLAPVIHCDLKPDNVLLD---DNLVAYLSDFGIAKLL 642
H +IH DLKP+N++L L+ + D G AK L
Sbjct: 139 HEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL 175
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 10/162 (6%)
Query: 485 LELCRATNGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFK-----SFAVE 538
L++ + + + +G G F +VYKAR + + VA+K L K + E
Sbjct: 3 LDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE 62
Query: 539 CEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDV 598
++++ + H N+I ++ + ++ +LV ++ LE + ++ +L M+
Sbjct: 63 IKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMT 121
Query: 599 ASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
LEYLH ++H DLKP+N+LLD+N V L+DFG+AK
Sbjct: 122 LQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 8/143 (5%)
Query: 498 NLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGR--AFKSFAVECEMMKSIRHRNLIKVIS 555
LIG+G FG VY R EVA+++ +++ K+F E + RH N++ +
Sbjct: 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 556 SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIH 615
+C + A++ +L + + +LD+ + I ++ + YLH ++H
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILH 153
Query: 616 CDLKPDNVLLDDNLVAYLSDFGI 638
DLK NV D+ V ++DFG+
Sbjct: 154 KDLKSKNVFYDNGKVV-ITDFGL 175
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLK 619
+ ++ EY +G L YL Q L + DV A+EYL +H DL
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 138
Query: 620 PDNVLLDDNLVAYLSDFGIAKLLIGED 646
N L++D V +SDFG+++ ++ ++
Sbjct: 139 ARNCLVNDQGVVKVSDFGLSRYVLDDE 165
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLK 619
+ ++ EY +G L YL Q L + DV A+EYL +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 132
Query: 620 PDNVLLDDNLVAYLSDFGIAKLLIGED 646
N L++D V +SDFG+++ ++ ++
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDE 159
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 497 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN--LQCGRAFKSFAVECEMMKSIRHRNL 550
N +IGRG FG VY L G + AVK N G F E +MK H N+
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 111
Query: 551 IKVISSCSNEEFKALV-LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+ ++ C E LV L Y HG L ++ + + + + VA ++YL
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 168
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+H DL N +LD+ ++DFG+A+
Sbjct: 169 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 199
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 497 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN--LQCGRAFKSFAVECEMMKSIRHRNL 550
N +IGRG FG VY L G + AVK N G F E +MK H N+
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 112
Query: 551 IKVISSCSNEEFKALV-LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+ ++ C E LV L Y HG L ++ + + + + VA ++YL
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 169
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+H DL N +LD+ ++DFG+A+
Sbjct: 170 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 200
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLK 619
+ ++ EY +G L YL Q L + DV A+EYL +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 132
Query: 620 PDNVLLDDNLVAYLSDFGIAKLLIGED 646
N L++D V +SDFG+++ ++ ++
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDE 159
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLK 619
+ ++ EY +G L YL Q L + DV A+EYL +H DL
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 131
Query: 620 PDNVLLDDNLVAYLSDFGIAKLLIGED 646
N L++D V +SDFG+++ ++ ++
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYVLDDE 158
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G FG V+ + +VAVK L+ G + ++F E +MK+++H L+++ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVK--TLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL-NIMIDVASALEYLHFGCLAPVIHCD 617
EE ++ E+ GSL +L S + +L + +A + Y+ IH D
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRD 134
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ NVL+ ++L+ ++DFG+A+++
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVI 159
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 497 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN--LQCGRAFKSFAVECEMMKSIRHRNL 550
N +IGRG FG VY L G + AVK N G F E +MK H N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 92
Query: 551 IKVISSCSNEEFKALV-LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+ ++ C E LV L Y HG L ++ + + + + VA ++YL
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 149
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+H DL N +LD+ ++DFG+A+
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 7/150 (4%)
Query: 499 LIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSC 557
++G+G +G VY R L + + +A+K + R + E + K ++H+N+++ + S
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 558 SNEEFKALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMI-DVASALEYLHFGCLAPVIH 615
S F + +E P GSL L S + D Q + + L+YLH ++H
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVH 145
Query: 616 CDLKPDNVLLDD-NLVAYLSDFGIAKLLIG 644
D+K DNVL++ + V +SDFG +K L G
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAG 175
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLK 619
+ ++ EY +G L YL Q L + DV A+EYL +H DL
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 127
Query: 620 PDNVLLDDNLVAYLSDFGIAKLLIGED 646
N L++D V +SDFG+++ ++ ++
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVLDDE 154
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG+G F V AR + G EVA+K+ + + + E +MK + H N++K+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
E+ L++EY G + YL + + + R + SA++Y H ++H
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVHR 135
Query: 617 DLKPDNVLLDDNLVAYLSDFGIA 639
DLK +N+LLD ++ ++DFG +
Sbjct: 136 DLKAENLLLDADMNIKIADFGFS 158
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 497 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN--LQCGRAFKSFAVECEMMKSIRHRNL 550
N +IGRG FG VY L G + AVK N G F E +MK H N+
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 85
Query: 551 IKVISSCSNEEFKALV-LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+ ++ C E LV L Y HG L ++ + + + + VA ++YL
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 142
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+H DL N +LD+ ++DFG+A+
Sbjct: 143 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 497 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN--LQCGRAFKSFAVECEMMKSIRHRNL 550
N +IGRG FG VY L G + AVK N G F E +MK H N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 91
Query: 551 IKVISSCSNEEFKALV-LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+ ++ C E LV L Y HG L ++ + + + + VA ++YL
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 148
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+H DL N +LD+ ++DFG+A+
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 497 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN--LQCGRAFKSFAVECEMMKSIRHRNL 550
N +IGRG FG VY L G + AVK N G F E +MK H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 93
Query: 551 IKVISSCSNEEFKALV-LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+ ++ C E LV L Y HG L ++ + + + + VA ++YL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 150
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+H DL N +LD+ ++DFG+A+
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 7/150 (4%)
Query: 499 LIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSC 557
++G+G +G VY R L + + +A+K + R + E + K ++H+N+++ + S
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 558 SNEEFKALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMI-DVASALEYLHFGCLAPVIH 615
S F + +E P GSL L S + D Q + + L+YLH ++H
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVH 131
Query: 616 CDLKPDNVLLDD-NLVAYLSDFGIAKLLIG 644
D+K DNVL++ + V +SDFG +K L G
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLAG 161
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 497 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN--LQCGRAFKSFAVECEMMKSIRHRNL 550
N +IGRG FG VY L G + AVK N G F E +MK H N+
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 88
Query: 551 IKVISSCSNEEFKALV-LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+ ++ C E LV L Y HG L ++ + + + + VA ++YL
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 145
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+H DL N +LD+ ++DFG+A+
Sbjct: 146 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Query: 486 ELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI 545
E+ R T E +G G G V+ +VAVK Q + +F E +MK +
Sbjct: 9 EVPRETLKLVER--LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 65
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 604
+H+ L+++ + + E ++ EY +GSL +L + + I L I + L++ +A + +
Sbjct: 66 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ IH DL+ N+L+ D L ++DFG+A+L+
Sbjct: 125 IEERNY---IHRDLRAANILVSDTLSCKIADFGLARLI 159
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 29/170 (17%)
Query: 500 IGRGGFGSVYKARL------GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKV 553
+G G FG V+ A D M VAVK A + F E E++ ++H+++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 554 ISSCSNEEFKALVLEYKPHGSLEKYLYS--------------SNCILDIFQRLNIMIDVA 599
C+ +V EY HG L ++L S + L + Q L + VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 600 SALEY---LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
+ + Y LHF +H DL N L+ LV + DFG+++ + D
Sbjct: 140 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 183
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 497 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN--LQCGRAFKSFAVECEMMKSIRHRNL 550
N +IGRG FG VY L G + AVK N G F E +MK H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 93
Query: 551 IKVISSCSNEEFKALV-LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+ ++ C E LV L Y HG L ++ + + + + VA ++YL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 150
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+H DL N +LD+ ++DFG+A+
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 497 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN--LQCGRAFKSFAVECEMMKSIRHRNL 550
N +IGRG FG VY L G + AVK N G F E +MK H N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 92
Query: 551 IKVISSCSNEEFKALV-LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+ ++ C E LV L Y HG L ++ + + + + VA ++YL
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 149
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+H DL N +LD+ ++DFG+A+
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 497 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN--LQCGRAFKSFAVECEMMKSIRHRNL 550
N +IGRG FG VY L G + AVK N G F E +MK H N+
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 90
Query: 551 IKVISSCSNEEFKALV-LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+ ++ C E LV L Y HG L ++ + + + + VA ++YL
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 147
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+H DL N +LD+ ++DFG+A+
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 500 IGRGGFGSVYKARL---GD--GMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKV 553
+G G FG V R GD G +VAVK + G E E+++++ H N++K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 554 ISSCSNEEFKA--LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
C+ + L++E+ P GSL++YL + +++ Q+L + + ++YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS---R 145
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+H DL NVL++ + DFG+ K +
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 29/170 (17%)
Query: 500 IGRGGFGSVYKARL------GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKV 553
+G G FG V+ A D M VAVK A + F E E++ ++H+++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 554 ISSCSNEEFKALVLEYKPHGSLEKYLYS--------------SNCILDIFQRLNIMIDVA 599
C+ +V EY HG L ++L S + L + Q L + VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 600 SALEY---LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
+ + Y LHF +H DL N L+ LV + DFG+++ + D
Sbjct: 146 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 189
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG+G F V AR + G EVA+K+ + + + E +MK + H N++K+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
E+ L++EY G + YL + + + R + SA++Y H ++H
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVHR 138
Query: 617 DLKPDNVLLDDNLVAYLSDFGIA 639
DLK +N+LLD ++ ++DFG +
Sbjct: 139 DLKAENLLLDADMNIKIADFGFS 161
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVA---VKVFNLQCGRAFKSFAVECEMMKSIRHRN 549
F IGRG F VY+A L DG+ VA V++F+L +A E +++K + H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLE---KYLYSSNCILDIFQRLNIMIDVASALEYLH 606
+IK +S + +VLE G L K+ ++ + + SALE++H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 607 FGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+H D+KP NV + V L D G+ +
Sbjct: 154 S---RRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 500 IGRGGFGSVYKARL---GD--GMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKV 553
+G G FG V R GD G +VAVK + G E E+++++ H N++K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 554 ISSCSNEEFKA--LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
C+ + L++E+ P GSL++YL + +++ Q+L + + ++YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS---R 133
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+H DL NVL++ + DFG+ K +
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAI 164
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 499 LIGRGGFGSVYKARLGD-GMEVAVKVF-NLQCGRAFKSFAV-ECEMMKSIRHRNLIKVIS 555
L+G G +G V K R D G VA+K F + K A+ E +++K +RH NL+ ++
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 556 SCSNEEFKALVLEYKPHGSLEKY-LYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
C ++ LV E+ H L+ L+ + + Q+ + + + + + H +I
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKY--LFQIINGIGFCH---SHNII 146
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
H D+KP+N+L+ + V L DFG A+ L
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTL 174
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 492 NGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGR--------AFKSFAVECEMM 542
+ ++IGRG V + G E AVK+ + R ++ E ++
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 543 KSIR-HRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 601
+ + H ++I +I S + F LV + G L YL + L + +IM + A
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEA 212
Query: 602 LEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
+ +LH ++H DLKP+N+LLDDN+ LSDFG +
Sbjct: 213 VSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFS 247
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 497 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN--LQCGRAFKSFAVECEMMKSIRHRNL 550
N +IGRG FG VY L G + AVK N G F E +MK H N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 94
Query: 551 IKVISSCSNEEFKALV-LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+ ++ C E LV L Y HG L ++ + + + + VA +++L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 151
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
+H DL N +LD+ ++DFG+A+ ++ ++
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKE 188
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 85/166 (51%), Gaps = 26/166 (15%)
Query: 493 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
++ +IG G FG V++A+L + EVA+K LQ R FK+ E ++M+ ++H N++
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKV-LQDKR-FKN--RELQIMRIVKHPNVVD 96
Query: 553 VIS------SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNI------MIDVAS 600
+ + +E F LVLEY P E +S + Q + + M +
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVP----ETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 601 ALEYLH-FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIG 644
+L Y+H G + H D+KP N+LLD + V L DFG AK+LI
Sbjct: 153 SLAYIHSIG----ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 497 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN--LQCGRAFKSFAVECEMMKSIRHRNL 550
N +IGRG FG VY L G + AVK N G F E +MK H N+
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 152
Query: 551 IKVISSCSNEEFKALV-LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+ ++ C E LV L Y HG L ++ + + + + VA +++L
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 209
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+H DL N +LD+ ++DFG+A+
Sbjct: 210 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 499 LIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAF--KSFAVECEMMKSIRHRNLIKVISS 556
LIGRG +G+VYK L D VAVKVF+ + F + +M+ H N+ + I
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLME---HDNIARFI-- 73
Query: 557 CSNEEFKA-------LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF-- 607
+E A LV+EY P+GSL KYL S D + V L YLH
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYL--SLHTSDWVSSCRLAHSVTRGLAYLHTEL 131
Query: 608 ---GCLAPVI-HCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
P I H DL NVL+ ++ +SDFG++ L G
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTG 172
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 498 NLIGRGGFGSVYKA--RLGDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRHRNLIK 552
+IG G FG V +L E+ V + L+ G + + F E +M H N+I
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ + ++ E+ +GSL+ +L ++ + Q + ++ +A+ ++YL
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMN 155
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+H DL N+L++ NLV +SDFG+++ L
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFL 185
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 497 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN--LQCGRAFKSFAVECEMMKSIRHRNL 550
N +IGRG FG VY L G + AVK N G F E +MK H N+
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 98
Query: 551 IKVISSCSNEEFKALV-LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+ ++ C E LV L Y HG L ++ + + + + VA +++L
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 155
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+H DL N +LD+ ++DFG+A+
Sbjct: 156 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 186
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 498 NLIGRGGFGSVYKARL----GDGMEVAVKVFNLQ--CGRAFKSFAVECEMMKSIRHRNLI 551
++G G FGSV + L G ++VAVK L R + F E MK H N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 552 KVISSCSNEEFKAL-----VLEYKPHGSLEKYLYSSNC-----ILDIFQRLNIMIDVASA 601
+++ C + + +L + +G L YL S + + L M+D+A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 602 LEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
+EYL +H DL N +L D++ ++DFG++K + D
Sbjct: 160 MEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGD 201
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 81/153 (52%), Gaps = 20/153 (13%)
Query: 501 GRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKS--IRHRNLIKVISS-- 556
RG FG V+KA+L + VAVK+F LQ ++++S E E+ + ++H NL++ I++
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQS---EREIFSTPGMKHENLLQFIAAEK 79
Query: 557 -CSNEEFK-ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF------- 607
SN E + L+ + GSL YL + I+ + ++ ++ L YLH
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYLKGN--IITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 608 -GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
G + H D K NVLL +L A L+DFG+A
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA 170
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 497 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN--LQCGRAFKSFAVECEMMKSIRHRNL 550
N +IGRG FG VY L G + AVK N G F E +MK H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 93
Query: 551 IKVISSCSNEEFKALV-LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+ ++ C E LV L Y HG L ++ + + + + VA +++L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 150
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+H DL N +LD+ ++DFG+A+
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 497 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN--LQCGRAFKSFAVECEMMKSIRHRNL 550
N +IGRG FG VY L G + AVK N G F E +MK H N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 94
Query: 551 IKVISSCSNEEFKALV-LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+ ++ C E LV L Y HG L ++ + + + + VA +++L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 151
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+H DL N +LD+ ++DFG+A+
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 497 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN--LQCGRAFKSFAVECEMMKSIRHRNL 550
N +IGRG FG VY L G + AVK N G F E +MK H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 93
Query: 551 IKVISSCSNEEFKALV-LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+ ++ C E LV L Y HG L ++ + + + + VA +++L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 150
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+H DL N +LD+ ++DFG+A+
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559
+G G FG V + +VAVK+ + + F E + M + H L+K CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLK 619
E +V EY +G L YL S L+ Q L + DV + +L IH DL
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLA 131
Query: 620 PDNVLLDDNLVAYLSDFGIAKLLIGED 646
N L+D +L +SDFG+ + ++ +
Sbjct: 132 ARNCLVDRDLCVKVSDFGMTRYVLDDQ 158
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 497 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN--LQCGRAFKSFAVECEMMKSIRHRNL 550
N +IGRG FG VY L G + AVK N G F E +MK H N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 91
Query: 551 IKVISSCSNEEFKALV-LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+ ++ C E LV L Y HG L ++ + + + + VA +++L
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 148
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+H DL N +LD+ ++DFG+A+
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSIRHRNLIKVIS 555
+G+G FG+VY AR + A+KV F Q +A E E+ +RH N++++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 556 SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIH 615
+ L+LEY P G++ + L D + + ++A+AL Y H VIH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITELANALSYCHS---KRVIH 135
Query: 616 CDLKPDNVLLDDNLVAYLSDFG 637
D+KP+N+LL N ++DFG
Sbjct: 136 RDIKPENLLLGSNGELKIADFG 157
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 15/170 (8%)
Query: 485 LELCRATNGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKS 534
L C+ F E +L +G+G FGSV R LGD G VAVK +
Sbjct: 11 LYACQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD 70
Query: 535 FAVECEMMKSIRHRNLIKV--ISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL 592
F E +++K++ ++K +S + LV+EY P G L +L LD + L
Sbjct: 71 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL 130
Query: 593 NIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ +EYL +H DL N+L++ ++DFG+AKLL
Sbjct: 131 LYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLL 177
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 488 CRATNGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKSFAV 537
C+ F E +L +G+G FGSV R LGD G VAVK + F
Sbjct: 1 CQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 60
Query: 538 ECEMMKSIRHRNLIKV--ISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIM 595
E +++K++ ++K +S + LV+EY P G L +L LD + L
Sbjct: 61 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 120
Query: 596 IDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ +EYL G +H DL N+L++ ++DFG+AKLL
Sbjct: 121 SQICKGMEYL--GSRR-CVHRDLAARNILVESEAHVKIADFGLAKLL 164
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSIRHRNLIKVIS 555
+G+G FG+VY AR + A+KV F Q +A E E+ +RH N++++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 556 SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIH 615
+ L+LEY P G++ + L D + + ++A+AL Y H VIH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITELANALSYCHS---KRVIH 135
Query: 616 CDLKPDNVLLDDNLVAYLSDFG 637
D+KP+N+LL N ++DFG
Sbjct: 136 RDIKPENLLLGSNGELKIADFG 157
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 18/166 (10%)
Query: 489 RATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRH 547
R + F E ++G+G FG V KAR D A+K + E ++ S+ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 548 -------------RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNI 594
RN +K +++ + + +EY +G+L ++S N + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+ AL Y+H +IH DLKP N+ +D++ + DFG+AK
Sbjct: 122 FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G + K L D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITELANALSYC 129
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G FG V+ +VA+K L+ G + +SF E ++MK ++H L+++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKT--LKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNC-ILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
E +V EY GSL +L L + +++ VA+ + Y+ IH D
Sbjct: 75 EEPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRD 130
Query: 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642
L+ N+L+ + L+ ++DFG+A+L+
Sbjct: 131 LRSANILVGNGLICKIADFGLARLI 155
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559
+G G FG V+ A +VAVK + ++F E +MK+++H L+K+ + +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASAL-EYLHFGCLAPVIHCDL 618
E ++ E+ GSL +L S Q L +ID ++ + E + F IH DL
Sbjct: 82 EPI-YIITEFMAKGSLLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 137
Query: 619 KPDNVLLDDNLVAYLSDFGIAKLL 642
+ N+L+ +LV ++DFG+A+++
Sbjct: 138 RAANILVSASLVCKIADFGLARVI 161
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G + K L D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITELANALSYC 129
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 130 HS---KRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559
+G G FG V+ A +VAVK + ++F E +MK+++H L+K+ + +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASAL-EYLHFGCLAPVIHCDL 618
E ++ E+ GSL +L S Q L +ID ++ + E + F IH DL
Sbjct: 255 EPI-YIITEFMAKGSLLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 310
Query: 619 KPDNVLLDDNLVAYLSDFGIAKLL 642
+ N+L+ +LV ++DFG+A+++
Sbjct: 311 RAANILVSASLVCKIADFGLARVI 334
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 6/148 (4%)
Query: 494 FSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLI 551
+ + IG GGF V A + G VA+K+ + G E E +K++RH+++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
++ +VLEY P G L Y+ S + + + R+ + + SA+ Y+H A
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVHSQGYA 130
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
H DLKP+N+L D+ L DFG+
Sbjct: 131 ---HRDLKPENLLFDEYHKLKLIDFGLC 155
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 497 NNLIGRGGFGSVYKA----RLGDGMEVAVKVFNLQCGRAFK-SFAVECEMMKSIRHRNLI 551
N ++G G FG VY+ G+ + VAVK C K F E +MK++ H +++
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH-FGCL 610
K+I EE +++E P+G L YL + L + + + + A+ YL C
Sbjct: 89 KLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC- 146
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
+H D+ N+L+ L DFG+++ + ED
Sbjct: 147 ---VHRDIAVRNILVASPECVKLGDFGLSRYIEDED 179
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 467 PSNDANMPLVATWRTFSYLELCRATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-F 524
P N+ L + + + A F +G+G FG+VY AR + A+KV F
Sbjct: 9 PENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF 68
Query: 525 NLQCGRA--FKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSS 582
Q +A E E+ +RH N++++ + L+LEY P G++ + L
Sbjct: 69 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QK 127
Query: 583 NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
D + + ++A+AL Y H VIH D+KP+N+LL ++DFG
Sbjct: 128 LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 179
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 497 NNLIGRGGFGSVYKA----RLGDGMEVAVKVFNLQCGRAFK-SFAVECEMMKSIRHRNLI 551
N ++G G FG VY+ G+ + VAVK C K F E +MK++ H +++
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH-FGCL 610
K+I EE +++E P+G L YL + L + + + + A+ YL C
Sbjct: 77 KLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC- 134
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
+H D+ N+L+ L DFG+++ + ED
Sbjct: 135 ---VHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559
+G G FG V+ A +VAVK + ++F E +MK+++H L+K+ + +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASAL-EYLHFGCLAPVIHCDL 618
E ++ E+ GSL +L S Q L +ID ++ + E + F IH DL
Sbjct: 249 EPI-YIITEFMAKGSLLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 304
Query: 619 KPDNVLLDDNLVAYLSDFGIAKL 641
+ N+L+ +LV ++DFG+A++
Sbjct: 305 RAANILVSASLVCKIADFGLARV 327
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 467 PSNDANMPLVATWRTFSYLELCRATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-F 524
P N+ L + + + A F +G+G FG+VY AR + A+KV F
Sbjct: 9 PENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF 68
Query: 525 NLQCGRA--FKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSS 582
Q +A E E+ +RH N++++ + L+LEY P G++ + L
Sbjct: 69 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QK 127
Query: 583 NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
D + + ++A+AL Y H VIH D+KP+N+LL ++DFG
Sbjct: 128 LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 179
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 17/151 (11%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI--RHRNLIKVISSC 557
+G+G +G V++ L G VAVK+F+ R +S+ E E+ ++ RH N++ I+S
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFS---SRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 558 SNEEFKA----LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH---FGCL 610
+ L+ Y HGSL +L L+ L + + A L +LH FG
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQT--LEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 611 A-PVI-HCDLKPDNVLLDDNLVAYLSDFGIA 639
P I H D K NVL+ NL ++D G+A
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLA 160
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 497 NNLIGRGGFGSVYKA----RLGDGMEVAVKVFNLQCGRAFK-SFAVECEMMKSIRHRNLI 551
N ++G G FG VY+ G+ + VAVK C K F E +MK++ H +++
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH-FGCL 610
K+I EE +++E P+G L YL + L + + + + A+ YL C
Sbjct: 73 KLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC- 130
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
+H D+ N+L+ L DFG+++ + ED
Sbjct: 131 ---VHRDIAVRNILVASPECVKLGDFGLSRYIEDED 163
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 494 FSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKSFAVECEMMK 543
F E +L +G+G FGSV R LGD G VAVK + F E +++K
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 67
Query: 544 SIRHRNLIKV--ISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 601
++ ++K +S + LV+EY P G L +L LD + L +
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 127
Query: 602 LEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+EYL +H DL N+L++ ++DFG+AKLL
Sbjct: 128 MEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLL 165
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVF---NLQCGRAFKSFAVECEMMKSIRH 547
+ F +G+G FG+VY AR + A+KV L+ E E+ +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
N++++ + + + L+LE+ P G L K L + D + M ++A AL Y H
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH- 132
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
VIH D+KP+N+L+ ++DFG
Sbjct: 133 --ERKVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVF---NLQCGRAFKSFAVECEMMKSIRH 547
+ F +G+G FG+VY AR + A+KV L+ E E+ +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
N++++ + + + L+LE+ P G L K L + D + M ++A AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH- 131
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
VIH D+KP+N+L+ ++DFG
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + + A+KV F Q +A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 125 HS---KKVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 125
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 126 HS---KRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 128
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 129 HS---KRVIHRDIKPENLLLGSAGELKIADFG 157
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 128 HS---KRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 125 HS---KRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 123
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 124 HS---KRVIHRDIKPENLLLGSAGELKIADFG 152
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 125 HS---KRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 125 HS---KRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 482 FSYLELCRATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQ-C--GRAFKSFAV 537
F + E+ RA IG+G FG V + D ++ A+K N Q C ++
Sbjct: 14 FDHFEILRA---------IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK 64
Query: 538 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMID 597
E ++M+ + H L+ + S +EE +V++ G L +L + + +L I +
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFI-CE 123
Query: 598 VASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+ AL+YL +IH D+KPDN+LLD++ +++DF IA +L E
Sbjct: 124 LVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Query: 498 NLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQC---GRAFKSFAVECE-MMKSIRHRNLIK 552
+IG+G FG V AR + + AVKV + + K E ++K+++H L+
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ S + VL+Y G L +L C L+ R ++ASAL YLH
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH---SLN 159
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+++ DLKP+N+LLD L+DFG+ K
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCK 187
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 125 HS---KRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 141
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 142 HS---KRVIHRDIKPENLLLGSAGELKIADFG 170
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 128 HS---KRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 125 HS---KRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 128 HS---KRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 125 HS---KRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 129
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
IG+G G+VY A + G EVA++ NLQ + E +M+ ++ N++ + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
+ +V+EY GSL + + C +D Q + + ALE+LH VIH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRDI 142
Query: 619 KPDNVLLDDNLVAYLSDFGIAKLLIGED 646
K DN+LL + L+DFG + E
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQ 170
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 129
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 130 HS---KRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
IG+G G+VY A + G EVA++ NLQ + E +M+ ++ N++ + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
+ +V+EY GSL + + C +D Q + + ALE+LH VIH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRDI 142
Query: 619 KPDNVLLDDNLVAYLSDFGIAKLLIGED 646
K DN+LL + L+DFG + E
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQ 170
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 128 HS---KRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 8/142 (5%)
Query: 500 IGRGGFGSVYKARLGDGMEV-AVKVF---NLQCGRAFKSFAVECEMMKSIRHRNLIKVIS 555
+G+G FG+VY AR + A+KV L+ E E+ +RH N++++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 556 SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIH 615
+ + L+LE+ P G L K L + D + M ++A AL Y H VIH
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH---ERKVIH 137
Query: 616 CDLKPDNVLLDDNLVAYLSDFG 637
D+KP+N+L+ ++DFG
Sbjct: 138 RDIKPENLLMGYKGELKIADFG 159
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 125
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 126 HS---KRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 125
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 126 HS---KRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG+G F V AR + G EVAVK+ + + + E + K + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
E+ LV EY G + YL + + R + SA++Y H ++H
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 617 DLKPDNVLLDDNLVAYLSDFGIA 639
DLK +N+LLD + ++DFG +
Sbjct: 138 DLKAENLLLDADXNIKIADFGFS 160
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 129
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 130 HS---KRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 126
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 127 HS---KRVIHRDIKPENLLLGSAGELKIADFG 155
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 125 HS---KRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 128 HS---KRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 121
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL ++DFG
Sbjct: 122 HS---KRVIHRDIKPENLLLGSAGELKIADFG 150
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
IG+G G+VY A + G EVA++ NLQ + E +M+ ++ N++ + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
+ +V+EY GSL + + C +D Q + + ALE+LH VIH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRDI 142
Query: 619 KPDNVLLDDNLVAYLSDFGIAKLLIGE 645
K DN+LL + L+DFG + E
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPE 169
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
IG+G G+VY A + G EVA++ NLQ + E +M+ ++ N++ + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
+ +V+EY GSL + + C +D Q + + ALE+LH VIH D+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRDI 143
Query: 619 KPDNVLLDDNLVAYLSDFGIAKLLIGED 646
K DN+LL + L+DFG + E
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQ 171
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + + + VAVK+ + E EMMK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL-----------YSSNCILD---IFQRL-NI 594
+I ++ +C+ + +++EY G+L +YL Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+A +EYL IH DL NVL+ +N V ++DFG+A+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + + + VAVK+ + E EMMK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL-----------YSSNCILD---IFQRL-NI 594
+I ++ +C+ + +++EY G+L +YL Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+A +EYL IH DL NVL+ +N V ++DFG+A+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 494 FSENNLIGRGGFGSVYKARL----GDGMEVAVKVF--NLQCGRAFKSFAVECEMMKSIRH 547
F+ ++G+G FGSV +A+L G ++VAVK+ ++ + F E MK H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 548 RNLIKVISSCSNEEFKA------LVLEYKPHGSLEKYLYSSNCILDIF-----QRLNIMI 596
++ K++ K ++L + HG L +L +S + F + M+
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
D+A +EYL IH DL N +L +++ ++DFG+++ + D
Sbjct: 145 DIACGMEYLSSRNF---IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + + + VAVK+ + E EMMK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL-----------YSSNCILD---IFQRL-NI 594
+I ++ +C+ + +++EY G+L +YL Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+A +EYL IH DL NVL+ +N V ++DFG+A+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 494 FSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAFKSFAVECEMMK 543
F E +L +G+G FGSV R LGD G VAVK + F E +++K
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 63
Query: 544 SIRHRNLIKV--ISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 601
++ ++K +S LV+EY P G L +L LD + L +
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 123
Query: 602 LEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+EYL +H DL N+L++ ++DFG+AKLL
Sbjct: 124 MEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLL 161
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + + + VAVK+ + E EMMK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL-----------YSSNCILD---IFQRL-NI 594
+I ++ +C+ + +++EY G+L +YL Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+A +EYL IH DL NVL+ +N V ++DFG+A+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLAR 205
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 15/157 (9%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQC-------GRAFKSFAVECEMMKSI 545
F NL+G+G F VY+A + G+EVA+K+ + + R + C++
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL---- 68
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
+H +++++ + + + LVLE +G + +YL + + + M + + + YL
Sbjct: 69 KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL 128
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
H ++H DL N+LL N+ ++DFG+A L
Sbjct: 129 HS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + + + VAVK+ + E EMMK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL-----------YSSNCILD---IFQRL-NI 594
+I ++ +C+ + +++EY G+L +YL Y N + + F+ L +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+A +EYL IH DL NVL+ +N V ++DFG+A+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + + + VAVK+ + E EMMK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL-----------YSSNCILD---IFQRL-NI 594
+I ++ +C+ + +++EY G+L +YL Y N + + F+ L +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+A +EYL IH DL NVL+ +N V ++DFG+A+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Query: 498 NLIGRGGFGSVYKA--RLGDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRHRNLIK 552
+IG G FG V +L E+ V + L+ G + + F E +M H N+I
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ + ++ E+ +GSL+ +L ++ + Q + ++ +A+ ++YL
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMN 129
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+H L N+L++ NLV +SDFG+++ L
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFL 159
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 18/166 (10%)
Query: 489 RATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRH 547
R + F E ++G+G FG V KAR D A+K + E ++ S+ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 548 -------------RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNI 594
RN +K +++ + + +EY + +L ++S N + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+ AL Y+H +IH DLKP N+ +D++ + DFG+AK
Sbjct: 122 FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Query: 500 IGRGGFGSVYK--ARLGDGMEVAVKVFNLQCGRAFKSFAV-ECEMMKSIRHRNLIKVISS 556
+G G + +VYK ++L D + VA+K L+ A+ E ++K ++H N++ +
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
E+ LV EY L++YL I+++ + + L Y H V+H
Sbjct: 69 IHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHR 124
Query: 617 DLKPDNVLLDDNLVAYLSDFGIAK 640
DLKP N+L+++ L+DFG+A+
Sbjct: 125 DLKPQNLLINERGELKLADFGLAR 148
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 15/150 (10%)
Query: 501 GRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS---- 556
RG FG V+KA+L + VAVK+F +Q +++++ E + ++H N+++ I +
Sbjct: 33 ARGRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRG 90
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF-------GC 609
S + L+ + GSL +L ++ ++ + +I +A L YLH G
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
+ H D+K NVLL +NL A ++DFG+A
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLA 178
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSI-RHRN 549
+G G FG V K + + + VAVK+ E EMMK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL-----------YSSNCILD---IFQRL-NI 594
+I ++ +C+ + +++EY G+L +YL Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+A +EYL IH DL NVL+ +N V ++DFG+A+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 80/147 (54%), Gaps = 9/147 (6%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQC-GRAFKSFAVECEM--MKSIRHRNLIKVIS 555
+G G FG V A G +VA+K+ N + ++ +E E+ ++ +RH ++IK+
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 556 SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIH 615
+++ +V+EY + L Y+ + + + R + SA+EY H ++H
Sbjct: 82 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVH 136
Query: 616 CDLKPDNVLLDDNLVAYLSDFGIAKLL 642
DLKP+N+LLD++L ++DFG++ ++
Sbjct: 137 RDLKPENLLLDEHLNVKIADFGLSNIM 163
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 14/163 (8%)
Query: 490 ATNGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAVECEM-----MK 543
AT+ + IG G +G+VYKAR G VA+K + G + E+ ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 544 SIRHRNLIKVISSC----SNEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDV 598
+ H N+++++ C ++ E K ++ L YL + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 599 ASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
L++LH C ++H DLKP+N+L+ L+DFG+A++
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 14/163 (8%)
Query: 490 ATNGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAVECEM-----MK 543
AT+ + IG G +G+VYKAR G VA+K + G + E+ ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 544 SIRHRNLIKVISSCS----NEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDV 598
+ H N+++++ C+ + E K ++ L YL + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 599 ASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
L++LH C ++H DLKP+N+L+ L+DFG+A++
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 14/163 (8%)
Query: 490 ATNGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAVECEM-----MK 543
AT+ + IG G +G+VYKAR G VA+K + G + E+ ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 544 SIRHRNLIKVISSC----SNEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIMIDV 598
+ H N+++++ C ++ E K ++ L YL + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 599 ASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
L++LH C ++H DLKP+N+L+ L+DFG+A++
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 80/147 (54%), Gaps = 9/147 (6%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQC-GRAFKSFAVECEM--MKSIRHRNLIKVIS 555
+G G FG V A G +VA+K+ N + ++ +E E+ ++ +RH ++IK+
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 556 SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIH 615
+++ +V+EY + L Y+ + + + R + SA+EY H ++H
Sbjct: 81 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVH 135
Query: 616 CDLKPDNVLLDDNLVAYLSDFGIAKLL 642
DLKP+N+LLD++L ++DFG++ ++
Sbjct: 136 RDLKPENLLLDEHLNVKIADFGLSNIM 162
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + + + VAVK+ + E EMMK I +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL-----------YSSNCILD---IFQRL-NI 594
+I ++ +C+ + +++EY G+L +YL Y N + + F+ L +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+A +EYL IH DL NVL+ +N V ++DFG+A+
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 80/147 (54%), Gaps = 9/147 (6%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQC-GRAFKSFAVECEM--MKSIRHRNLIKVIS 555
+G G FG V A G +VA+K+ N + ++ +E E+ ++ +RH ++IK+
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 556 SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIH 615
+++ +V+EY + L Y+ + + + R + SA+EY H ++H
Sbjct: 72 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVH 126
Query: 616 CDLKPDNVLLDDNLVAYLSDFGIAKLL 642
DLKP+N+LLD++L ++DFG++ ++
Sbjct: 127 RDLKPENLLLDEHLNVKIADFGLSNIM 153
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 80/147 (54%), Gaps = 9/147 (6%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQC-GRAFKSFAVECEM--MKSIRHRNLIKVIS 555
+G G FG V A G +VA+K+ N + ++ +E E+ ++ +RH ++IK+
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 556 SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIH 615
+++ +V+EY + L Y+ + + + R + SA+EY H ++H
Sbjct: 76 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVH 130
Query: 616 CDLKPDNVLLDDNLVAYLSDFGIAKLL 642
DLKP+N+LLD++L ++DFG++ ++
Sbjct: 131 RDLKPENLLLDEHLNVKIADFGLSNIM 157
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 70/135 (51%), Gaps = 9/135 (6%)
Query: 506 GSVYKARLGDGMEVAVKVFNLQ--CGRAFKSFAVECEMMKSIRHRNLIKVISSCSNE--E 561
G ++K R G ++ VKV ++ R + F EC ++ H N++ V+ +C +
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 562 FKALVLEYKPHGSLEKYLYS-SNCILDIFQRLNIMIDVASALEYLHFGCLAPVI-HCDLK 619
L+ + P+GSL L+ +N ++D Q + +D+A + +LH L P+I L
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH--TLEPLIPRHALN 140
Query: 620 PDNVLLDDNLVAYLS 634
+V++D+++ A +S
Sbjct: 141 SRSVMIDEDMTARIS 155
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNLIKVISSC 557
+G G +G VYKA+ G VA+K L S A+ E ++K + H N++ +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 558 SNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
+E LV E+ L+K L + L Q I I + L + ++H D
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 618 LKPDNVLLDDNLVAYLSDFGIAK 640
LKP N+L++ + L+DFG+A+
Sbjct: 145 LKPQNLLINSDGALKLADFGLAR 167
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQC-GRAFKSFAVECEM--MKSIRHRNLIKVIS 555
+G G FG V A +VA+K + Q ++ VE E+ +K +RH ++IK+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 556 SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIH 615
+ +V+EY G L Y+ + + R + A+EY H ++H
Sbjct: 77 VITTPTDIVMVIEYAG-GELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCH---RHKIVH 131
Query: 616 CDLKPDNVLLDDNLVAYLSDFGIAKLL 642
DLKP+N+LLDDNL ++DFG++ ++
Sbjct: 132 RDLKPENLLLDDNLNVKIADFGLSNIM 158
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNLIKVISSC 557
+G G +G VYKA+ G VA+K L S A+ E ++K + H N++ +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 558 SNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
+E LV E+ L+K L + L Q I I + L + ++H D
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 618 LKPDNVLLDDNLVAYLSDFGIAK 640
LKP N+L++ + L+DFG+A+
Sbjct: 145 LKPQNLLINSDGALKLADFGLAR 167
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL +++FG
Sbjct: 128 HS---KRVIHRDIKPENLLLGSAGELKIANFG 156
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + +VAVK+ + E EMMK I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL---------YSSNCILDIFQRL------NI 594
+I ++ +C+ + +++EY G+L +YL YS N + ++L +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +EYL IH DL NVL+ ++ V ++DFG+A+
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + + + VAVK+ + E EMMK I +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL-----------YSSNCILD---IFQRL-NI 594
+I ++ +C+ + +++EY G+L +YL Y N + + F+ L +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+A +EYL IH DL NVL+ +N V ++DFG+A+
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 194
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 490 ATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--FKSFAVECEMMKSI 545
A F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
RH N++++ + L+LEY P G++ + L D + + ++A+AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 126
Query: 606 HFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
H VIH D+KP+N+LL +++FG
Sbjct: 127 HS---KRVIHRDIKPENLLLGSAGELKIANFG 155
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 20/186 (10%)
Query: 467 PSNDANMPLVATWRTFSYLELCRATNGFSENNLIGRGGFGSVYKARL---GDGMEVAV-- 521
PS AN L R F EL + ++G G FG+V+K G+ +++ V
Sbjct: 16 PSEKANKVLA---RIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCI 65
Query: 522 KVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLY 580
KV + GR +F++ + S+ H ++++++ C + LV +Y P GSL ++
Sbjct: 66 KVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVR 124
Query: 581 SSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
L LN + +A + YL + +H +L NVLL ++DFG+A
Sbjct: 125 QHRGALGPQLLLNWGVQIAKGMYYLEEHGM---VHRNLAARNVLLKSPSQVQVADFGVAD 181
Query: 641 LLIGED 646
LL +D
Sbjct: 182 LLPPDD 187
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + + + VAVK+ + E EMMK I +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL-----------YSSNCILD---IFQRL-NI 594
+I ++ +C+ + +++EY G+L +YL Y N + + F+ L +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+A +EYL IH DL NVL+ +N V ++DFG+A+
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 197
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Query: 240 ELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPL-TFWNLKDILQLNFSSNFLTGPLP 298
+L +K+F + + FS+ L L+L+ NE+ I FW L +L+LN S NFL
Sbjct: 281 DLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDS 340
Query: 299 LEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGD 351
NL L +D S N+ ++ GL NL+ L L N+L+ S+PD D
Sbjct: 341 RMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK-SVPDGIFD 392
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 31/175 (17%)
Query: 487 LCRATNGFSENNLIGRGGFGSVYKAR--LGDGMEVAVKVFNLQCGR------AFKSFAVE 538
LCRA + IG G +G V+KAR G VA+K +Q G + AV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV- 64
Query: 539 CEMMKSIRHRNLIKVISSCS----NEEFK-ALVLEYKPHGSLEKYL-------YSSNCIL 586
+++ H N++++ C+ + E K LV E+ L YL + I
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIK 123
Query: 587 DIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
D+ M + L++LH V+H DLKP N+L+ + L+DFG+A++
Sbjct: 124 DM------MFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 8/147 (5%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNL---QCGRAFKSFAVECEMMKSIRHRNLIKVIS 555
+G GG +VY A ++VA+K + + K F E + H+N++ +I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 556 SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIH 615
++ LV+EY +L +Y+ S+ L + +N + +++ H ++H
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDGIKHAHD---MRIVH 134
Query: 616 CDLKPDNVLLDDNLVAYLSDFGIAKLL 642
D+KP N+L+D N + DFGIAK L
Sbjct: 135 RDIKPQNILIDSNKTLKIFDFGIAKAL 161
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + + + VAVK+ + E EMMK I +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL-----------YSSNCILD---IFQRL-NI 594
+I ++ +C+ + +++EY G+L +YL Y N + + F+ L +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+A +EYL IH DL NVL+ +N V ++DFG+A+
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLAR 192
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
IG+G G+VY A + G EVA++ NLQ + E +M+ ++ N++ + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
+ +V+EY GSL + + C +D Q + + ALE+LH VIH ++
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRNI 143
Query: 619 KPDNVLLDDNLVAYLSDFGIAKLLIGED 646
K DN+LL + L+DFG + E
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQ 171
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 31/175 (17%)
Query: 487 LCRATNGFSENNLIGRGGFGSVYKAR--LGDGMEVAVKVFNLQCGR------AFKSFAVE 538
LCRA + IG G +G V+KAR G VA+K +Q G + AV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV- 64
Query: 539 CEMMKSIRHRNLIKVISSCS----NEEFK-ALVLEYKPHGSLEKYL-------YSSNCIL 586
+++ H N++++ C+ + E K LV E+ L YL + I
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIK 123
Query: 587 DIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
D+ M + L++LH V+H DLKP N+L+ + L+DFG+A++
Sbjct: 124 DM------MFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G FG VYKA+ + G A KV + + + VE E++ + H ++K++ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
++ +++E+ P G+++ + + L Q I + LE L+F +IH DL
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 135
Query: 619 KPDNVLLDDNLVAYLSDFGIA 639
K NVL+ L+DFG++
Sbjct: 136 KAGNVLMTLEGDIRLADFGVS 156
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 31/175 (17%)
Query: 487 LCRATNGFSENNLIGRGGFGSVYKAR--LGDGMEVAVKVFNLQCGR------AFKSFAVE 538
LCRA + IG G +G V+KAR G VA+K +Q G + AV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV- 64
Query: 539 CEMMKSIRHRNLIKVISSCS----NEEFK-ALVLEYKPHGSLEKYL-------YSSNCIL 586
+++ H N++++ C+ + E K LV E+ L YL + I
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIK 123
Query: 587 DIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
D+ M + L++LH V+H DLKP N+L+ + L+DFG+A++
Sbjct: 124 DM------MFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + +VAVK+ + E EMMK I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL---------YSSNCILDIFQRL------NI 594
+I ++ +C+ + +++EY G+L +YL YS N + ++L +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +EYL IH DL NVL+ ++ V ++DFG+A+
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G FG VYKA+ + G A KV + + + VE E++ + H ++K++ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
++ +++E+ P G+++ + + L Q I + LE L+F +IH DL
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 143
Query: 619 KPDNVLLDDNLVAYLSDFGIA 639
K NVL+ L+DFG++
Sbjct: 144 KAGNVLMTLEGDIRLADFGVS 164
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 23/168 (13%)
Query: 489 RATNGFSEN----NLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFAV------ 537
+T+GF EN ++GRG V + E AVK+ ++ G +F + V
Sbjct: 10 HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69
Query: 538 ---ECEMMKSIR-HRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQR-- 591
E ++++ + H N+I++ + F LV + G L YL + + R
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI 129
Query: 592 LNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
+ +++V AL L+ ++H DLKP+N+LLDD++ L+DFG +
Sbjct: 130 MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + +VAVK+ + E EMMK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL---------YSSNCILDIFQRL------NI 594
+I ++ +C+ + +++EY G+L +YL YS N + ++L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +EYL IH DL NVL+ ++ V ++DFG+A+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + +VAVK+ + E EMMK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL---------YSSNCILDIFQRL------NI 594
+I ++ +C+ + +++EY G+L +YL YS N + ++L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +EYL IH DL NVL+ ++ V ++DFG+A+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + +VAVK+ + E EMMK I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL---------YSSNCILDIFQRL------NI 594
+I ++ +C+ + +++EY G+L +YL YS N + ++L +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +EYL IH DL NVL+ ++ V ++DFG+A+
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 23/168 (13%)
Query: 489 RATNGFSEN----NLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFAV------ 537
+T+GF EN ++GRG V + E AVK+ ++ G +F + V
Sbjct: 10 HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69
Query: 538 ---ECEMMKSIR-HRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQR-- 591
E ++++ + H N+I++ + F LV + G L YL + + R
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI 129
Query: 592 LNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
+ +++V AL L+ ++H DLKP+N+LLDD++ L+DFG +
Sbjct: 130 MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 123
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP+N+L++ L+DFG+A+
Sbjct: 124 HR---VLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + +VAVK+ + E EMMK I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL---------YSSNCILDIFQRL------NI 594
+I ++ +C+ + +++EY G+L +YL YS N + ++L +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +EYL IH DL NVL+ ++ V ++DFG+A+
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 122
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP+N+L++ L+DFG+A+
Sbjct: 123 HR---VLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 128
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G FG VYKA+ + + A KV + + + + VE +++ S H N++K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
E +++E+ G+++ + L Q + AL YLH +IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDL 161
Query: 619 KPDNVLLDDNLVAYLSDFGIA 639
K N+L + L+DFG++
Sbjct: 162 KAGNILFTLDGDIKLADFGVS 182
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + + + VAVK+ + E EMMK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL-----------YSSNCILD---IFQRL-NI 594
+I ++ +C+ + +++ Y G+L +YL Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+A +EYL IH DL NVL+ +N V ++DFG+A+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G FG VYKA+ + + A KV + + + + VE +++ S H N++K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
E +++E+ G+++ + L Q + AL YLH +IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDL 161
Query: 619 KPDNVLLDDNLVAYLSDFGIA 639
K N+L + L+DFG++
Sbjct: 162 KAGNILFTLDGDIKLADFGVS 182
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 490 ATNGF---SENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI 545
A N F S+ ++G G FG V+K G+++A K+ + + + E +M +
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
H NLI++ + ++ LV+EY G L + + L + M + + ++
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHM 203
Query: 606 HFGCLAPVIHCDLKPDNVLL--DDNLVAYLSDFGIAK 640
H ++H DLKP+N+L D + DFG+A+
Sbjct: 204 H---QMYILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 121
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G FG VYKA+ + + A KV + + + + VE +++ S H N++K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
E +++E+ G+++ + L Q + AL YLH +IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDL 161
Query: 619 KPDNVLLDDNLVAYLSDFGIA 639
K N+L + L+DFG++
Sbjct: 162 KAGNILFTLDGDIKLADFGVS 182
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 128
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+++ P G L Y+ + LN + +A + YL
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 137 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 172
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 21/163 (12%)
Query: 490 ATNGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFAV-ECEMMKSIRH 547
+++ F + +G G + +VYK G+ VA+K L S A+ E +MK ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNC----------ILDIFQRLNIMID 597
N++++ E LV E+ L+KY+ S ++ FQ
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKYFQ------- 114
Query: 598 VASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
L+ L F ++H DLKP N+L++ L DFG+A+
Sbjct: 115 -WQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLSFCHS 121
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+++ P G L Y+ + LN + +A + YL
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 140 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 175
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 124
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 123
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 120
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+ + P G L Y+ + LN + +A + YL
Sbjct: 111 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 169
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 170 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 205
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 125
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 121
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G +GSVYKA G VA+K ++ + E +M+ +++K S
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
+V+EY GS+ + N L + I+ LEYLHF IH D+
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDI 151
Query: 619 KPDNVLLDDNLVAYLSDFGIA 639
K N+LL+ A L+DFG+A
Sbjct: 152 KAGNILLNTEGHAKLADFGVA 172
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 121
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 124
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 120
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 125
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 123
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 122
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+K++ E LV E+ H L+K++ ++ + I L I + L+ L F
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 122
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+++ P G L Y+ + LN + +A + YL
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 137 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 172
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 120
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 121
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+++ P G L Y+ + LN + +A + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 139 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + + + VAVK+ + E EMMK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL-----------YSSNCILD---IFQRL-NI 594
+I ++ +C+ + +++ Y G+L +YL Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+A +EYL IH DL NVL+ +N V ++DFG+A+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+++ P G L Y+ + LN + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 138 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 173
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 8/176 (4%)
Query: 225 SIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPL-TFWNLKDI 283
+IP +I T+ +L+L NKL F L LR+L L+ N+L ++P F LK++
Sbjct: 30 AIPSNIPADTK--KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNL 87
Query: 284 LQLNFSSNFLTGPLPLEI-GNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLE 342
L + N L LP+ + L L + N S+ P L L YL LGYN L+
Sbjct: 88 ETLWVTDNKLQA-LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ 146
Query: 343 GSIPDSFGDLIXXXXXXXXXXXXXGAIPT-SLEKLSYLEDLNLSFNKLEGEIPRGG 397
S+P D + +P + +KL+ L+ L L N+L+ +P G
Sbjct: 147 -SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVPEGA 200
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 43/109 (39%), Gaps = 1/109 (0%)
Query: 232 RLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPL-TFWNLKDILQLNFSS 290
+L L EL L N+L P F +L L LSL NEL S+P F L + +L +
Sbjct: 107 QLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYN 166
Query: 291 NFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYN 339
N L L L + N V L+ L+ L L N
Sbjct: 167 NQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 69/190 (36%), Gaps = 37/190 (19%)
Query: 88 LELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNP 147
L+L N S F L L L L DN L + P F K+L + ++DN
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKL-QTLPAGIF----KELKNLETLWVTDNK 96
Query: 148 LDGILSKTSIGNLSH--SLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPIT 205
L + IG +L + + + P +LT + LG N+L
Sbjct: 97 LQAL----PIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ------ 146
Query: 206 LSXXXXXXXXXXXXNKLEGSIPDSIC-RLTELYELELGGNKLFGSIPACFSNLASLRILS 264
S+P + +LT L EL L N+L F L L+ L
Sbjct: 147 -------------------SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLK 187
Query: 265 LSSNELTSIP 274
L +N+L +P
Sbjct: 188 LDNNQLKRVP 197
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+++ P G L Y+ + LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 136 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 120
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 121
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+K++ E LV E+ H L+K++ ++ + I L I + L+ L F
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 122
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 121
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 18/166 (10%)
Query: 489 RATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRH 547
R + F E ++G+G FG V KAR D A+K + E ++ S+ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNH 61
Query: 548 -------------RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNI 594
RN +K ++ + + EY + +L ++S N + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+ AL Y+H +IH +LKP N+ +D++ + DFG+AK
Sbjct: 122 FRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 22/160 (13%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNL---QCGRAFKSFAVECEMMKSIRHRN 549
FS+ IG G FG+VY AR + + VA+K + Q ++ E ++ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVAS-------AL 602
I+ E LV+EY L S++ +L++ ++ +++A+ L
Sbjct: 116 TIQYRGCYLREHTAWLVMEY--------CLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 167
Query: 603 EYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
YLH + IH D+K N+LL + + L DFG A ++
Sbjct: 168 AYLHSHNM---IHRDVKAGNILLSEPGLVKLGDFGSASIM 204
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+K++ E LV E+ H L+K++ ++ + I L I + L+ L F
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 121
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 498 NLIGRGGFGSVYKARL---GDGMEVAV--KVFNLQCGR-AFKSFAVECEMMKSIRHRNLI 551
++G G FG+V+K G+ +++ V KV + GR +F++ + S+ H +++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
+++ C + LV +Y P GSL ++ L LN + +A + YL +
Sbjct: 79 RLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGM- 136
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
+H +L NVLL ++DFG+A LL +D
Sbjct: 137 --VHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 500 IGRGGFGSVYKARLGDGME-VAVKVFNLQCG-RAFKSFAV-ECEMMKSIRHRNLIKVISS 556
IG G +G+V+KA+ + E VA+K L S A+ E ++K ++H+N++++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
+++ LV E+ L+KY S N LD + + + L + H V+H
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHR 125
Query: 617 DLKPDNVLLDDNLVAYLSDFGIAK 640
DLKP N+L++ N L+DFG+A+
Sbjct: 126 DLKPQNLLINRNGELKLADFGLAR 149
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 490 ATNGFSEN----NLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CGRAFKSFAVECEMM 542
A+ FS+N +G+G F V + G+E A K+ N + R F+ E +
Sbjct: 23 ASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 82
Query: 543 KSIRHRNLIKVISSCSNEEFKALVLEYKPHGSL-----EKYLYS----SNCILDIFQRLN 593
+ ++H N++++ S E F LV + G L + YS S+CI I +
Sbjct: 83 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE--- 139
Query: 594 IMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDN---LVAYLSDFGIA 639
++ Y H ++H +LKP+N+LL L+DFG+A
Sbjct: 140 -------SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 178
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+ + P G L Y+ + LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 136 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + +VAVK+ + E EMMK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL---------YSSNCILDIFQRL------NI 594
+I ++ +C+ + +++EY G+L +YL +S N + ++L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +EYL IH DL NVL+ ++ V ++DFG+A+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 22/160 (13%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNL---QCGRAFKSFAVECEMMKSIRHRN 549
FS+ IG G FG+VY AR + + VA+K + Q ++ E ++ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASA-------L 602
I+ E LV+EY L S++ +L++ ++ +++A+ L
Sbjct: 77 TIQYRGCYLREHTAWLVMEY--------CLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 128
Query: 603 EYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
YLH + IH D+K N+LL + + L DFG A ++
Sbjct: 129 AYLHSHNM---IHRDVKAGNILLSEPGLVKLGDFGSASIM 165
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 490 ATNGFSENNLIGRGGFGSVYKAR-LGDGMEVA---VKVFNLQCGRAFKSFAVECEM---- 541
AT+ + IG G +G+VYKAR G VA V+V N G + E+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 542 -MKSIRHRNLIKVISSCS----NEEFKALVLEYKPHGSLEKYLYSSNCI-LDIFQRLNIM 595
+++ H N+++++ C+ + E K ++ L YL + L ++M
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 596 IDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
L++LH C ++H DLKP+N+L+ L+DFG+A++
Sbjct: 127 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 169
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+ + P G L Y+ + LN + +A + YL
Sbjct: 102 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 160
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 161 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 196
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 28/161 (17%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQ--CGRAFKSFAVECEMMKSIRHRNLIKVISS 556
+G+G F V + ++ G E A K+ N + R + E + + ++H N++++ S
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 557 CSNEEFKALVLEYKPHGSL-----EKYLYS----SNCILDIFQRLNIMIDVASALEYLHF 607
S E F LV + G L + YS S+CI I + +N + H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN----------HCH- 120
Query: 608 GCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLLIGE 645
L ++H DLKP+N+LL L+DFG+A + G+
Sbjct: 121 --LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD 159
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+ + P G L Y+ + LN + +A + YL
Sbjct: 83 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 141
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 142 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 177
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+ + P G L Y+ + LN + +A + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 139 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+ + P G L Y+ + LN + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 138 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 173
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+ + P G L Y+ + LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 136 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+ + P G L Y+ + LN + +A + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 139 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+ + P G L Y+ + LN + +A + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 143 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 9/135 (6%)
Query: 506 GSVYKARLGDGMEVAVKVFNLQ--CGRAFKSFAVECEMMKSIRHRNLIKVISSCSNE--E 561
G ++K R G ++ VKV ++ R + F EC ++ H N++ V+ +C +
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 562 FKALVLEYKPHGSLEKYLYS-SNCILDIFQRLNIMIDVASALEYLHFGCLAPVI-HCDLK 619
L+ + P+GSL L+ +N ++D Q + +D A +LH L P+I L
Sbjct: 83 HPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH--TLEPLIPRHALN 140
Query: 620 PDNVLLDDNLVAYLS 634
+V +D++ A +S
Sbjct: 141 SRSVXIDEDXTARIS 155
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+ + P G L Y+ + LN + +A + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 139 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + +VAVK+ + E EMMK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL---------YSSNCILDIFQRL------NI 594
+I ++ +C+ + +++EY G+L +YL Y N + ++L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +EYL IH DL NVL+ ++ V ++DFG+A+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 28/166 (16%)
Query: 500 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRN 549
+G G FG V K + +VAVK+ + E EMMK I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL---------YSSNCILDIFQRL------NI 594
+I ++ +C+ + +++EY G+L +YL Y N + ++L +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +EYL IH DL NVL+ ++ V ++DFG+A+
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+ + P G L Y+ + LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 136 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+ + P G L Y+ + LN + +A + YL
Sbjct: 87 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 145
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 146 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 181
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+++ P G L Y+ + LN + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG AKLL E+
Sbjct: 138 RRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+ + P G L Y+ + LN + +A + YL
Sbjct: 74 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLED 132
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 133 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 168
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+++ P G L Y+ + LN + +A + YL
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG AKLL E+
Sbjct: 140 RRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 175
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+ ++ +S L + + + + + L + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 121
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP+N+L++ L+DFG+A+
Sbjct: 122 HR---VLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+++ P G L Y+ + LN + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG AKLL E+
Sbjct: 138 RRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 9/150 (6%)
Query: 497 NNLIGRGGFGSVYKARLGDG----MEVAVKVFN-LQCGRAFKSFAVECEMMKSIRHRNLI 551
+ +IG+G FG VY D ++ A+K + + + ++F E +M+ + H N++
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 552 KVIS-SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+I E ++L Y HG L +++ S + ++ + VA +EYL
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AE 142
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+H DL N +LD++ ++DFG+A+
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 5/158 (3%)
Query: 484 YLELCRATNGFSENNLIGR-GGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEM 541
Y + R N +IG G FG VYKA+ + + A KV + + + + VE ++
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI 60
Query: 542 MKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 601
+ S H N++K++ + E +++E+ G+++ + L Q + A
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA 120
Query: 602 LEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
L YLH +IH DLK N+L + L+DFG++
Sbjct: 121 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 155
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 28/161 (17%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQ--CGRAFKSFAVECEMMKSIRHRNLIKVISS 556
+G+G F V + ++ G E A K+ N + R + E + + ++H N++++ S
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 557 CSNEEFKALVLEYKPHGSL-----EKYLYS----SNCILDIFQRLNIMIDVASALEYLHF 607
S E F LV + G L + YS S+CI I + +N + H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN----------HCH- 120
Query: 608 GCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLLIGE 645
L ++H DLKP+N+LL L+DFG+A + G+
Sbjct: 121 --LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD 159
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+ + P G L Y+ + LN + +A + YL
Sbjct: 71 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 130 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 165
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 23/164 (14%)
Query: 493 GFSEN----NLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFAV---------E 538
GF EN ++GRG V + E AVK+ ++ G +F + V E
Sbjct: 1 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKE 60
Query: 539 CEMMKSIR-HRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQR--LNIM 595
++++ + H N+I++ + F LV + G L YL + + R + +
Sbjct: 61 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 120
Query: 596 IDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
++V AL L+ ++H DLKP+N+LLDD++ L+DFG +
Sbjct: 121 LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS 158
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+K++ E LV E+ H L+ ++ ++ + I L I + L+ L F
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKTFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 124
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 494 FSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
++ N IGRG +G V A + G + A K F E E+MKS+ H N+I+
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 553 VISSCSNEEFKALVLEYKPHGSL-EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
+ + + LV+E G L E+ ++ + IM DV SA+ Y H +A
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLNVA 128
Query: 612 PVIHCDLKPDNVL-LDDNLVAYLS--DFGIA 639
H DLKP+N L L D+ + L DFG+A
Sbjct: 129 ---HRDLKPENFLFLTDSPDSPLKLIDFGLA 156
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+ L S A+ E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 121
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+ L S A+ E ++K + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+K++ +S L + + + + + L + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 120
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 494 FSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
++ N IGRG +G V A + G + A K F E E+MKS+ H N+I+
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 553 VISSCSNEEFKALVLEYKPHGSL-EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
+ + + LV+E G L E+ ++ + IM DV SA+ Y H +A
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLNVA 145
Query: 612 PVIHCDLKPDNVL-LDDNLVAYLS--DFGIA 639
H DLKP+N L L D+ + L DFG+A
Sbjct: 146 ---HRDLKPENFLFLTDSPDSPLKLIDFGLA 173
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ H L+ ++ +S L + + + + + L + H
Sbjct: 64 VKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 120
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 28/171 (16%)
Query: 491 TNGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CGRAFKSFAVECEMMKSIRH 547
T+ + IG+G F V + +L G E A K+ N + R + E + + ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSL-----EKYLYS----SNCILDIFQRLNIMIDV 598
N++++ S S E F LV + G L + YS S+CI I + +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV------ 116
Query: 599 ASALEYLHFGCLAPVIHCDLKPDNVLLDDNL---VAYLSDFGIAKLLIGED 646
LH + V+H DLKP+N+LL L+DFG+A + G+
Sbjct: 117 ------LHCHQMG-VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ 160
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 29/181 (16%)
Query: 482 FSYLELC-RATNGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CGRAFKSFAV 537
F + C R T+ + +G+G F V + + E A K+ N + R +
Sbjct: 20 FQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER 79
Query: 538 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSL-----EKYLYS----SNCILDI 588
E + + ++H N++++ S S E F LV + G L + YS S+CI I
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQI 139
Query: 589 FQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNL---VAYLSDFGIAKLLIGE 645
+ +N ++H ++H DLKP+N+LL L+DFG+A + GE
Sbjct: 140 LESVN----------HIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGE 186
Query: 646 D 646
Sbjct: 187 Q 187
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 33/177 (18%)
Query: 500 IGRGGFGSVYKARLGDGME------VAVKVFNLQCGRAFKS-FAVECEMMKSIRHRNLIK 552
IG G FG V++AR + VAVK+ + ++ F E +M + N++K
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSN----C-------------------ILDIF 589
++ C+ + L+ EY +G L ++L S + C L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 590 QRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
++L I VA+ + YL +H DL N L+ +N+V ++DFG+++ + D
Sbjct: 175 EQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD 228
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 500 IGRGGFGSVYKARLGDGME-VAVKVFNLQCG-RAFKSFAV-ECEMMKSIRHRNLIKVISS 556
IG G +G+V+KA+ + E VA+K L S A+ E ++K ++H+N++++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
+++ LV E+ L+KY S N LD + + + L + H V+H
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHR 125
Query: 617 DLKPDNVLLDDNLVAYLSDFGIAK 640
DLKP N+L++ N L++FG+A+
Sbjct: 126 DLKPQNLLINRNGELKLANFGLAR 149
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++ G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+++ P G L Y+ + LN + +A + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 143 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 23/175 (13%)
Query: 494 FSENNL-----IGRGGFGSVYKAR-LGDGME-----VAVKVFNLQCGRAFK-SFAVECEM 541
F NNL +G G FG V +A G G E VAVK+ K + E ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 542 MKSI-RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVAS 600
M + +H N++ ++ +C++ ++ EY +G L +L + +L+ I AS
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 601 ALEYLHFGCLAP----------VIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+ LHF IH D+ NVLL + VA + DFG+A+ ++ +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+ + P G L Y+ + LN + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG AKLL E+
Sbjct: 138 RRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+ + P G L Y+ + LN + +A + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG AKLL E+
Sbjct: 143 RRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 178
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 11/155 (7%)
Query: 500 IGRGGFGSVY-KARLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSIRHRNLIKVISSC 557
+G G FG V+ G+E +K N + + E E++KS+ H N+IK+
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 558 SNEEFKALVLEYKPHGSLEKYLYSSNC---ILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
+ +V+E G L + + S+ L +M + +AL Y H V+
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVV 146
Query: 615 HCDLKPDNVLLDD---NLVAYLSDFGIAKLLIGED 646
H DLKP+N+L D + + DFG+A+L ++
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++G G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+ + P G L Y+ + LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG AKLL E+
Sbjct: 136 RRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 171
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNLIKVISSC 557
IG G +G VYKA+ G A+K L+ S + E ++K ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 558 SNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
++ LV E+ L+K L L+ + ++ + + + Y H V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRD 125
Query: 618 LKPDNVLLDDNLVAYLSDFGIAK 640
LKP N+L++ ++DFG+A+
Sbjct: 126 LKPQNLLINREGELKIADFGLAR 148
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNLIKVISSC 557
IG G +G VYKA+ G A+K L+ S + E ++K ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 558 SNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
++ LV E+ L+K L L+ + ++ + + + Y H V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRD 125
Query: 618 LKPDNVLLDDNLVAYLSDFGIAK 640
LKP N+L++ ++DFG+A+
Sbjct: 126 LKPQNLLINREGELKIADFGLAR 148
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 8/147 (5%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRHRNLIKVIS 555
+G G FG V+ R +G A+KV + K E M+ + H +I++
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 556 SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIH 615
+ + + ++++Y G L L S + + +V ALEYLH +I+
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLH---SKDIIY 129
Query: 616 CDLKPDNVLLDDNLVAYLSDFGIAKLL 642
DLKP+N+LLD N ++DFG AK +
Sbjct: 130 RDLKPENILLDKNGHIKITDFGFAKYV 156
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNLIKVISSC 557
IG G +G VYKA+ G A+K L+ S + E ++K ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 558 SNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617
++ LV E+ L+K L L+ + ++ + + + Y H V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRD 125
Query: 618 LKPDNVLLDDNLVAYLSDFGIAK 640
LKP N+L++ ++DFG+A+
Sbjct: 126 LKPQNLLINREGELKIADFGLAR 148
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI--RHRNLIKVISS- 556
IG+G +G V+ + G +VAVKVF S+ E E+ +++ RH N++ I++
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAAD 100
Query: 557 ---CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA-- 611
+ L+ +Y +GSL YL S+ LD L + S L +LH +
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIFSTQ 158
Query: 612 --PVI-HCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
P I H DLK N+L+ N ++D G+A I +
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISD 195
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 12/152 (7%)
Query: 499 LIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRA---FKSFAVECEMMKSIRHRNLIKVI 554
++G GG V+ AR L D +VAVKV R + F E + ++ H ++ V
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 555 SSCSNE----EFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+ E +V+EY +L +++ + + + ++ D AL + H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-KRAIEVIADACQALNFSHQNG- 136
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+IH D+KP N+L+ + DFGIA+ +
Sbjct: 137 --IIHRDVKPANILISATNAVKVVDFGIARAI 166
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSIRHRNLIKVI 554
+G G FGSV Y+ R ++VA+KV +A + E ++M + + ++++I
Sbjct: 18 LGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
C E LV+E G L K+L + + ++ V+ ++YL +
Sbjct: 77 GVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFV 132
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
H DL NVLL + A +SDFG++K L +D
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADD 164
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ L+K++ +S L + + + + + L + H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 124
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP+N+L++ L+DFG+A+
Sbjct: 125 HR---VLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ L+K++ +S L + + + + + L + H
Sbjct: 68 VKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 124
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHF 607
+K++ E LV E+ L+K++ +S L + + + + + L + H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 122
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP+N+L++ L+DFG+A+
Sbjct: 123 HR---VLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 28/164 (17%)
Query: 491 TNGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CGRAFKSFAVECEMMKSIRH 547
++ + +G+G F V + G+E A K+ N + R F+ E + + ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSL-----EKYLYS----SNCILDIFQRLNIMIDV 598
N++++ S E F LV + G L + YS S+CI I +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-------- 116
Query: 599 ASALEYLHFGCLAPVIHCDLKPDNVLLDDN---LVAYLSDFGIA 639
++ Y H ++H +LKP+N+LL L+DFG+A
Sbjct: 117 --SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQC------GRAFKSFAVECEMMKSIRHRNLIK 552
+G G F V K R G G E A K + G + + E +++ IRH N+I
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N+ L+LE G L +L + + + + + + YLH +A
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHYLHSKRIA- 137
Query: 613 VIHCDLKPDNVLLDDNLVA----YLSDFGIA 639
H DLKP+N++L D V L DFGIA
Sbjct: 138 --HFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++ G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+ + P G L Y+ + LN + +A + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 143 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 494 FSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH 547
F + ++ G FG+VYK G+ +++ V + L+ +A K E +M S+ +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ +++ C + L+ + P G L Y+ + LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
L +H DL NVL+ ++DFG+AKLL E+
Sbjct: 136 RRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQC------GRAFKSFAVECEMMKSIRHRNLIK 552
+G G F V K R G G E A K + G + + E +++ IRH N+I
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N+ L+LE G L +L + + + + + + YLH +A
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHYLHSKRIA- 130
Query: 613 VIHCDLKPDNVLLDDNLVA----YLSDFGIA 639
H DLKP+N++L D V L DFGIA
Sbjct: 131 --HFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 28/164 (17%)
Query: 491 TNGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CGRAFKSFAVECEMMKSIRH 547
++ + +G+G F V + G+E A K+ N + R F+ E + + ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSL-----EKYLYS----SNCILDIFQRLNIMIDV 598
N++++ S E F LV + G L + YS S+CI I +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-------- 116
Query: 599 ASALEYLHFGCLAPVIHCDLKPDNVLLDDN---LVAYLSDFGIA 639
++ Y H ++H +LKP+N+LL L+DFG+A
Sbjct: 117 --SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQC------GRAFKSFAVECEMMKSIRHRNLIK 552
+G G F V K R G G E A K + G + + E +++ IRH N+I
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N+ L+LE G L +L + + + + + + YLH +A
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHYLHSKRIA- 151
Query: 613 VIHCDLKPDNVLLDDNLVA----YLSDFGIA 639
H DLKP+N++L D V L DFGIA
Sbjct: 152 --HFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 12/152 (7%)
Query: 499 LIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRA---FKSFAVECEMMKSIRHRNLIKVI 554
++G GG V+ AR L D +VAVKV R + F E + ++ H ++ V
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 555 SSCSNE----EFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+ E +V+EY +L +++ + + + ++ D AL + H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-KRAIEVIADACQALNFSHQNG- 136
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+IH D+KP N+++ + DFGIA+ +
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 28/164 (17%)
Query: 491 TNGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CGRAFKSFAVECEMMKSIRH 547
++ + +G+G F V + G+E A K+ N + R F+ E + + ++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSL-----EKYLYS----SNCILDIFQRLNIMIDV 598
N++++ S E F LV + G L + YS S+CI I +
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-------- 115
Query: 599 ASALEYLHFGCLAPVIHCDLKPDNVLLDDN---LVAYLSDFGIA 639
++ Y H ++H +LKP+N+LL L+DFG+A
Sbjct: 116 --SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 154
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 12/152 (7%)
Query: 499 LIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRA---FKSFAVECEMMKSIRHRNLIKVI 554
++G GG V+ AR L D +VAVKV R + F E + ++ H ++ V
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 555 SSCSNE----EFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+ E +V+EY +L +++ + + + ++ D AL + H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-KRAIEVIADACQALNFSHQNG- 136
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+IH D+KP N+++ + DFGIA+ +
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSIRHRNLIKVI 554
+G G FGSV Y+ R ++VA+KV +A + E ++M + + ++++I
Sbjct: 344 LGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
C E LV+E G L K+L + + ++ V+ ++YL +
Sbjct: 403 GVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF---V 458
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
H +L NVLL + A +SDFG++K L +D
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADD 490
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMK-SIRHRNLIK 552
F +++G G G++ + D +VAVK +C F E ++++ S H N+I+
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIR 82
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ + +F+ + +E +L++Y+ + + + ++ S L +LH
Sbjct: 83 YFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLN 138
Query: 613 VIHCDLKPDNVLL-----DDNLVAYLSDFGIAKLL 642
++H DLKP N+L+ + A +SDFG+ K L
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 20/158 (12%)
Query: 487 LCRATNGFSEN--NLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKS 544
LC+ NG SE +I + F K R D N + + E ++KS
Sbjct: 54 LCKEKNGHSEKAIKVIKKSQFD---KGRYSDD--------NKNIEKFHEEIYNEISLLKS 102
Query: 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
+ H N+IK+ ++++ LV E+ G L + + + + D NIM + S + Y
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICY 161
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDN---LVAYLSDFGIA 639
LH ++H D+KP+N+LL++ L + DFG++
Sbjct: 162 LH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 18/159 (11%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVF--------NLQCGRAFKSFAVECEMMK 543
+ F + ++GRGGFG V+ + M+ K++ L+ + ++ VE +++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 544 SIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI---DVAS 600
+ R ++ + + + LV+ G + ++Y+ + FQ + + S
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 601 ALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
LE+LH +I+ DLKP+NVLLDD+ +SD G+A
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFA---VECEMMKSIRH 547
N F L+G+G FG V R G A+K+ + A A E ++++ RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L + + + V+EY G L +L + R ++ SALEYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 122
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V++ D+K +N++LD + ++DFG+ K
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 18/159 (11%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVF--------NLQCGRAFKSFAVECEMMK 543
+ F + ++GRGGFG V+ + M+ K++ L+ + ++ VE +++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 544 SIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI---DVAS 600
+ R ++ + + + LV+ G + ++Y+ + FQ + + S
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 601 ALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
LE+LH +I+ DLKP+NVLLDD+ +SD G+A
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFA---VECEMMKSIRH 547
N F L+G+G FG V R G A+K+ + A A E ++++ RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L + + + V+EY G L +L + R ++ SALEYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 122
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V++ D+K +N++LD + ++DFG+ K
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFA---VECEMMKSIRH 547
N F L+G+G FG V R G A+K+ + A A E ++++ RH
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L + + + V+EY G L +L + R ++ SALEYLH
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 125
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V++ D+K +N++LD + ++DFG+ K
Sbjct: 126 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 156
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 18/159 (11%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVF--------NLQCGRAFKSFAVECEMMK 543
+ F + ++GRGGFG V+ + M+ K++ L+ + ++ VE +++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 544 SIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI---DVAS 600
+ R ++ + + + LV+ G + ++Y+ + FQ + + S
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 601 ALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
LE+LH +I+ DLKP+NVLLDD+ +SD G+A
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFA---VECEMMKSIRH 547
N F L+G+G FG V R G A+K+ + A A E ++++ RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L + + + V+EY G L +L + R ++ SALEYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 122
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V++ D+K +N++LD + ++DFG+ K
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFA---VECEMMKSIRH 547
N F L+G+G FG V R G A+K+ + A A E ++++ RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L + + + V+EY G L +L + R ++ SALEYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 122
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V++ D+K +N++LD + ++DFG+ K
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 18/159 (11%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVF--------NLQCGRAFKSFAVECEMMK 543
+ F + ++GRGGFG V+ + M+ K++ L+ + ++ VE +++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 544 SIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI---DVAS 600
+ R ++ + + + LV+ G + ++Y+ + FQ + + S
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 601 ALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
LE+LH +I+ DLKP+NVLLDD+ +SD G+A
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFA---VECEMMKSIRH 547
N F L+G+G FG V R G A+K+ + A A E ++++ RH
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L + + + V+EY G L +L + R ++ SALEYLH
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 127
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V++ D+K +N++LD + ++DFG+ K
Sbjct: 128 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 158
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 494 FSENNL-----IGRGGFGSVYKAR-LGDGME-----VAVKVFNLQCGRAFK-SFAVECEM 541
F NNL +G G FG V +A G G E VAVK+ K + E ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 542 MKSI-RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVAS 600
M + +H N++ ++ +C++ ++ EY +G L +L + +L+ I S
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 601 ALEYLHFGCLAP----------VIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+ LHF IH D+ NVLL + VA + DFG+A+ ++ +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 498 NLIGRGGFGSVYKARLGDG--------MEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRN 549
++G+GG+G V++ R G M+V K ++ + E +++ ++H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
++ +I + L+LEY G L L ++ + +++ AL +LH
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH--- 138
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+I+ DLKP+N++L+ L+DFG+ K
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFA---VECEMMKSIRH 547
N F L+G+G FG V R G A+K+ + A A E ++++ RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L + + + V+EY G L +L + R ++ SALEYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 122
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V++ D+K +N++LD + ++DFG+ K
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 27/197 (13%)
Query: 472 NMPLVATWRTFSYLELCRATNGFSENNLIGRGGFGSVYKARL-----GDGME-VAVKVFN 525
MPL+ + E+ + F E +G FG VYK L G+ + VA+K
Sbjct: 8 EMPLINQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK 65
Query: 526 LQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNC 584
+ G + F E + ++H N++ ++ + ++ +++ Y HG L ++L +
Sbjct: 66 DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSP 125
Query: 585 ILDIFQR---------------LNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNL 629
D+ ++++ +A+ +EYL V+H DL NVL+ D L
Sbjct: 126 HSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKL 182
Query: 630 VAYLSDFGIAKLLIGED 646
+SD G+ + + D
Sbjct: 183 NVKISDLGLFREVYAAD 199
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 28/162 (17%)
Query: 500 IGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CGRAFKSFAVECEMMKSIRHRNLIKVISS 556
+G+G F V + ++ G E A K+ N + R + E + + ++H N++++ S
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 557 CSNEEFKALVLEYKPHGSL-----EKYLYS----SNCILDIFQRLNIMIDVASALEYLHF 607
S E L+ + G L + YS S+CI I + + LH
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV------------LHC 137
Query: 608 GCLAPVIHCDLKPDNVLLDDNL---VAYLSDFGIAKLLIGED 646
+ V+H DLKP+N+LL L L+DFG+A + GE
Sbjct: 138 HQMG-VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 178
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 498 NLIGRGGFGSVYKARLGDG--------MEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRN 549
++G+GG+G V++ R G M+V K ++ + E +++ ++H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
++ +I + L+LEY G L L ++ + +++ AL +LH
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH--- 138
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+I+ DLKP+N++L+ L+DFG+ K
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 40/189 (21%)
Query: 494 FSENNLI-----GRGGFGSVYKA-------RLGDGMEVAVKVFNLQCGRA-FKSFAVECE 540
F NL+ G G FG V KA R G VAVK+ + + E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAG-YTTVAVKMLKENASPSELRDLLSEFN 78
Query: 541 MMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI--------------- 585
++K + H ++IK+ +CS + L++EY +GSL +L S +
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 586 --------LDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
L + ++ ++ ++YL ++H DL N+L+ + +SDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 638 IAKLLIGED 646
+++ + ED
Sbjct: 196 LSRDVYEED 204
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 40/189 (21%)
Query: 494 FSENNLI-----GRGGFGSVYKA-------RLGDGMEVAVKVFNLQCGRA-FKSFAVECE 540
F NL+ G G FG V KA R G VAVK+ + + E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAG-YTTVAVKMLKENASPSELRDLLSEFN 78
Query: 541 MMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI--------------- 585
++K + H ++IK+ +CS + L++EY +GSL +L S +
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 586 --------LDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
L + ++ ++ ++YL L +H DL N+L+ + +SDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMSL---VHRDLAARNILVAEGRKMKISDFG 195
Query: 638 IAKLLIGED 646
+++ + ED
Sbjct: 196 LSRDVYEED 204
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLI 551
N FS + +IGRGGFG VY R D K++ ++C + + E + ++ R ++
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIML 242
Query: 552 KVISS-------CSNEEFK-----ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVA 599
++S+ C + F + +L+ G L +L + R ++
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEII 301
Query: 600 SALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
LE++H V++ DLKP N+LLD++ +SD G+A
Sbjct: 302 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 40/189 (21%)
Query: 494 FSENNLI-----GRGGFGSVYKA-------RLGDGMEVAVKVFNLQCGRA-FKSFAVECE 540
F NL+ G G FG V KA R G VAVK+ + + E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAG-YTTVAVKMLKENASPSELRDLLSEFN 78
Query: 541 MMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI--------------- 585
++K + H ++IK+ +CS + L++EY +GSL +L S +
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 586 --------LDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
L + ++ ++ ++YL ++H DL N+L+ + +SDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 638 IAKLLIGED 646
+++ + ED
Sbjct: 196 LSRDVYEED 204
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 65/156 (41%), Gaps = 15/156 (9%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCGRAFKSFAVECEMMKSIRHRNLIK 552
+G G FG V + A G + VAVK L A F E M S+ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+ K +V E P GSL L + + +L R + VA + YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESKRF 136
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
IH DL N+LL + + DFG+ + L D
Sbjct: 137 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQND 169
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLI 551
N FS + +IGRGGFG VY R D K++ ++C + + E + ++ R ++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIML 243
Query: 552 KVISS-------CSNEEFK-----ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVA 599
++S+ C + F + +L+ G L +L + R ++
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEII 302
Query: 600 SALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
LE++H V++ DLKP N+LLD++ +SD G+A
Sbjct: 303 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 65/156 (41%), Gaps = 15/156 (9%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCGRAFKSFAVECEMMKSIRHRNLIK 552
+G G FG V + A G + VAVK L A F E M S+ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+ K +V E P GSL L + + +L R + VA + YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLESKRF 142
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
IH DL N+LL + + DFG+ + L D
Sbjct: 143 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLI 551
N FS + +IGRGGFG VY R D K++ ++C + + E + ++ R ++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIML 243
Query: 552 KVISS-------CSNEEFK-----ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVA 599
++S+ C + F + +L+ G L +L + R ++
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEII 302
Query: 600 SALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
LE++H V++ DLKP N+LLD++ +SD G+A
Sbjct: 303 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLI 551
N FS + +IGRGGFG VY R D K++ ++C + + E + ++ R ++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIML 243
Query: 552 KVISS-------CSNEEFK-----ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVA 599
++S+ C + F + +L+ G L +L + R ++
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEII 302
Query: 600 SALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
LE++H V++ DLKP N+LLD++ +SD G+A
Sbjct: 303 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 33/178 (18%)
Query: 498 NLIGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRAFK-SFAVECEMMKSI-RHRN 549
++G G FG V A + G ++VAVK+ + + + + E +MM + H N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYL-------------YSSNCILDIFQRLNIMI 596
++ ++ +C+ L+ EY +G L YL Y + L+ + LN++
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 597 ---------DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
VA +E+L F +H DL NVL+ V + DFG+A+ ++ +
Sbjct: 171 FEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD 225
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 32/168 (19%)
Query: 489 RATNGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVFNLQCGR---AFKSFAVECEM-- 541
R T F E ++G G F V+ K RL K+F L+C + AF+ ++E E+
Sbjct: 8 RKTFIFME--VLGSGAFSEVFLVKQRLTG------KLFALKCIKKSPAFRDSSLENEIAV 59
Query: 542 MKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSL-----EKYLYSSNCILDIFQRLNIMI 596
+K I+H N++ + + LV++ G L E+ +Y+ + Q+
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ----- 114
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKL 641
V SA++YLH ++H DLKP+N+L ++N ++DFG++K+
Sbjct: 115 -VLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 23/154 (14%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNL 550
+G G +GSV Y ARL +VAVK + R F+S E ++K ++H N+
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVK----KLSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 551 IKVIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 606
I ++ + S E+F + L G+ + S + D + ++ + L+Y+H
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-LVYQLLRGLKYIH 148
Query: 607 FGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP NV ++++ + DFG+A+
Sbjct: 149 S---AGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 65/156 (41%), Gaps = 15/156 (9%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCGRAFKSFAVECEMMKSIRHRNLIK 552
+G G FG V + A G + VAVK L A F E M S+ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+ K +V E P GSL L + + +L R + VA + YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLESKRF 142
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
IH DL N+LL + + DFG+ + L D
Sbjct: 143 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+K++ E LV E+ S++ + L I + L+ L F
Sbjct: 67 VKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 497 NNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR-HRNLIKVI 554
+ L+G G + V A L +G E AVK+ Q G + E E + + ++N++++I
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
++ LV E GS+ ++ + + ++ DVA+AL++LH +A
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQK-HFNEREASRVVRDVAAALDFLHTKGIA--- 133
Query: 615 HCDLKPDNVLLD 626
H DLKP+N+L +
Sbjct: 134 HRDLKPENILCE 145
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 65/156 (41%), Gaps = 15/156 (9%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCGRAFKSFAVECEMMKSIRHRNLIK 552
+G G FG V + A G + VAVK L A F E M S+ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+ K +V E P GSL L + + +L R + VA + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ--VAEGMGYLESKRF 132
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
IH DL N+LL + + DFG+ + L D
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 17/148 (11%)
Query: 498 NLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKS--------FAVECEMMKSIRHRN 549
+IGRG FG V R + + KV+ ++ F+ F E ++M
Sbjct: 81 KVIGRGAFGEVQLVR----HKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 136
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
++++ + ++++ +V+EY P G L L S+ + + + + +V AL+ +H
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKF-YTAEVVLALDAIHSMG 194
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
L IH D+KPDN+LLD + L+DFG
Sbjct: 195 L---IHRDVKPDNMLLDKHGHLKLADFG 219
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAV-ECEMMKSIRHRNL 550
F + IG G +G VYKAR G VA+K L S A+ E ++K + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+K++ E LV E+ S++ + L I + L+ L F
Sbjct: 68 VKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V+H DLKP N+L++ L+DFG+A+
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 500 IGRGGFG-SVYKARLGDGMEVAVKVFNLQ--CGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G FG ++ DG + +K N+ + + E ++ +++H N+++ S
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIM---IDVASALEYLHFGCLAPV 613
+V++Y G L K + + +L FQ I+ + + AL+++H +
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVL--FQEDQILDWFVQICLALKHVH---DRKI 146
Query: 614 IHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+H D+K N+ L + L DFGIA++L
Sbjct: 147 LHRDIKSQNIFLTKDGTVQLGDFGIARVL 175
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 17/160 (10%)
Query: 499 LIGRGGFGSVYKA-RLGDGMEVAVKVF--NLQCGRAFKSFAVECEMMKSI--------RH 547
L+G+GGFG+V+ RL D ++VA+KV N G + S +V C + ++ H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 548 RNLIKVISSCSNEEFKALVLEYK-PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 606
+I+++ +E LVLE P L Y+ + + R V +A+++ H
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRC-FFGQVVAAIQHCH 156
Query: 607 FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIGE 645
V+H D+K +N+L+D A L DFG LL E
Sbjct: 157 SRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE 193
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 65/156 (41%), Gaps = 15/156 (9%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCGRAFKSFAVECEMMKSIRHRNLIK 552
+G G FG V + A G + VAVK L A F E M S+ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+ K +V E P GSL L + + +L R + VA + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLESKRF 132
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
IH DL N+LL + + DFG+ + L D
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Query: 497 NNLIGRGGFGSVYKA---RLGD-----GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHR 548
N +G+G F ++K +GD EV +KV + +SF MM + H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 549 NLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
+L+ C + LV E+ GSL+ YL + ++I +L + +A+A+ +L
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN 132
Query: 609 CLAPVIHCDLKPDNVLL 625
L IH ++ N+LL
Sbjct: 133 TL---IHGNVCAKNILL 146
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F IG G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 25/164 (15%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
F E LIG GGFG V+KA+ DG +K +A + E + + + H N++
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVH 68
Query: 553 V------------ISSCSNEEFKA----LVLEYKPHGSLEKYLYSSNC-ILDIFQRLNIM 595
SS ++ K + +E+ G+LE+++ LD L +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 596 IDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
+ ++Y+H L I+ DLKP N+ L D + DFG+
Sbjct: 129 EQITKGVDYIHSKKL---INRDLKPSNIFLVDTKQVKIGDFGLV 169
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F IG G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 65/156 (41%), Gaps = 15/156 (9%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCGRAFKSFAVECEMMKSIRHRNLIK 552
+G G FG V + A G + VAVK L A F E M S+ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+ K +V E P GSL L + + +L R + VA + YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLESKRF 136
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
IH DL N+LL + + DFG+ + L D
Sbjct: 137 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQND 169
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 26/168 (15%)
Query: 491 TNGFSENNLIGRGGFGSVYKARLGDG-MEVAVKVFNLQ-----C---GRAFKSFAVECEM 541
+ +S + +G G FG V+ A + EV VK + C +E +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 542 MKSIRHRNLIKVISSCSNEEFKALVLEYKPHGS-LEKYLYSSNCILDIFQRLN------I 594
+ + H N+IKV+ N+ F LV+E HGS L+ + + +D RL+ I
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDLFAF-----IDRHPRLDEPLASYI 135
Query: 595 MIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ SA+ YL L +IH D+K +N+++ ++ L DFG A L
Sbjct: 136 FRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
IG G G V AR G +VAVK+ +L+ + + E +M+ +H N++++ S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
E +++E+ G+L + S L+ Q + V AL YLH VIH D+
Sbjct: 113 VGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDI 167
Query: 619 KPDNVLLDDNLVAYLSDFG 637
K D++LL + LSDFG
Sbjct: 168 KSDSILLTLDGRVKLSDFG 186
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 20/162 (12%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKS----FAVECEMMKSIRHRNLIKVI- 554
IGRG F +VYK L V V LQ + KS F E E +K ++H N+++
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 555 ---SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
S+ ++ LV E G+L+ YL + I + + L++LH
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFK-VXKIKVLRSWCRQILKGLQFLHTR-TP 150
Query: 612 PVIHCDLKPDNVLLD---------DNLVAYLSDFGIAKLLIG 644
P+IH DLK DN+ + D +A L AK +IG
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIG 192
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 65/156 (41%), Gaps = 15/156 (9%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCGRAFKSFAVECEMMKSIRHRNLIK 552
+G G FG V + A G + VAVK L A F E M S+ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+ K +V E P GSL L + + +L R + VA + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLESKRF 132
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
IH DL N+LL + + DFG+ + L D
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F IG G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 15/165 (9%)
Query: 487 LCRATNGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGR-AFKSFAV-ECEMMK 543
C + + + IG+G FG V+KAR G +VA+K ++ + F A+ E ++++
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ 72
Query: 544 SIRHRNLIKVISSCSNE-----EFKA---LVLEYKPHGSLEKYLYSSNCILDIFQRLNIM 595
++H N++ +I C + KA LV ++ H L L + + + +M
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVM 131
Query: 596 IDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+ + L Y+H ++H D+K NVL+ + V L+DFG+A+
Sbjct: 132 QMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 151
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 186
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
Query: 498 NLIGRGGFGSVYKARLGDG--------MEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRN 549
++G G +G V+ R G M+V K +Q + + E ++++ IR
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 550 LIKVISSCSNEEFK-ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI-DVASALEYLHF 607
+ + E K L+L+Y G L +L + + I + ++ ALE+LH
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE--HEVQIYVGEIVLALEHLH- 176
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
+I+ D+K +N+LLD N L+DFG++K + ++
Sbjct: 177 --KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE 213
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 500 IGRGGFGSVYKARLGD---GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
+GRG FG V+ R+ D G + AVK L+ RA + A C + S R ++ + +
Sbjct: 101 LGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRAEELMA--CAGLTSPR---IVPLYGA 153
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
+ + +E GSL + + C+ + + L + LEYLH ++H
Sbjct: 154 VREGPWVNIFMELLEGGSLGQLVKEQGCLPED-RALYYLGQALEGLEYLHS---RRILHG 209
Query: 617 DLKPDNVLL-DDNLVAYLSDFGIAKLL 642
D+K DNVLL D A L DFG A L
Sbjct: 210 DVKADNVLLSSDGSHAALCDFGHAVCL 236
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+++D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 193
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+++D ++DFG+AK + G
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG 193
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 18/152 (11%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVK----VFNLQCGRAFKSFAVECEMMKSIRHRNLIKVI 554
IG G +G V AR G +VA+K F++ K E +++K +H N+I +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN--AKRTLRELKILKHFKHDNIIAIK 120
Query: 555 S----SCSNEEFKAL--VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
+ EFK++ VL+ L + ++SS L + + + L+Y+H
Sbjct: 121 DILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQP-LTLEHVRYFLYQLLRGLKYMHS- 177
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A VIH DLKP N+L+++N + DFG+A+
Sbjct: 178 --AQVIHRDLKPSNLLVNENCELKIGDFGMAR 207
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 17/160 (10%)
Query: 489 RATNGFSENNLIGRGGFGSVY-KARLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSIR 546
R N + IG G FG +Y A + G EVA+K L+C + +E + K ++
Sbjct: 6 RVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIK---LECVKTKHPQLHIESKFYKMMQ 62
Query: 547 HRNLIKVISSCSNE-EFKALVLEY-KPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
I I C E ++ +V+E P SLE + + L + + S +EY
Sbjct: 63 GGVGIPSIKWCGAEGDYNVMVMELLGP--SLEDLFNFCSRKFSLKTVLLLADQMISRIEY 120
Query: 605 LHFGCLAPVIHCDLKPDNVLL----DDNLVAYLSDFGIAK 640
+H IH D+KPDN L+ NLV Y+ DFG+AK
Sbjct: 121 IH---SKNFIHRDVKPDNFLMGLGKKGNLV-YIIDFGLAK 156
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 500 IGRGGFGSVYKARLGD---GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
+GRG FG V+ R+ D G + AVK L+ RA + A C + S R ++ + +
Sbjct: 82 LGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRAEELMA--CAGLTSPR---IVPLYGA 134
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHC 616
+ + +E GSL + + C+ + + L + LEYLH ++H
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLVKEQGCLPED-RALYYLGQALEGLEYLHS---RRILHG 190
Query: 617 DLKPDNVLL-DDNLVAYLSDFGIAKLL 642
D+K DNVLL D A L DFG A L
Sbjct: 191 DVKADNVLLSSDGSHAALCDFGHAVCL 217
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 19/163 (11%)
Query: 500 IGRGGFGSVYKARLGDGME------VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY+ D ++ VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILD---------IFQRLNIMIDVASALE 603
++ S + +V+E HG L+ YL S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
YL+ +H DL N ++ + + DFG+ + + D
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 184
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 144
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 145 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 179
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 15/165 (9%)
Query: 487 LCRATNGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGR-AFKSFAV-ECEMMK 543
C + + + IG+G FG V+KAR G +VA+K ++ + F A+ E ++++
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ 72
Query: 544 SIRHRNLIKVISSCSNEEFKA--------LVLEYKPHGSLEKYLYSSNCILDIFQRLNIM 595
++H N++ +I C + LV ++ H L L + + + +M
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVM 131
Query: 596 IDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+ + L Y+H ++H D+K NVL+ + V L+DFG+A+
Sbjct: 132 QMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 499 LIGRGGFGSVYKARLGDGMEV-AVKVFNL-----QCGRAFKSFAVECEMMKSIRHRNLIK 552
+IGRG FG V R +V A+K+ + + AF F E ++M +++
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAFANSPWVVQ 133
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ + ++ + +V+EY P G L L S+ + + + R +V AL+ +H
Sbjct: 134 LFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAIH---SMG 188
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFG 637
IH D+KPDN+LLD + L+DFG
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFG 213
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+++D ++DFG+AK + G
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG 193
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 19/163 (11%)
Query: 500 IGRGGFGSVYKARLGDGME------VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY+ D ++ VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILD---------IFQRLNIMIDVASALE 603
++ S + +V+E HG L+ YL S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
YL+ +H DL N ++ + + DFG+ + + D
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 184
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 18/152 (11%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVK----VFNLQCGRAFKSFAVECEMMKSIRHRNLIKVI 554
IG G +G V AR G +VA+K F++ K E +++K +H N+I +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN--AKRTLRELKILKHFKHDNIIAIK 119
Query: 555 S----SCSNEEFKAL--VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
+ EFK++ VL+ L + ++SS L + + + L+Y+H
Sbjct: 120 DILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQP-LTLEHVRYFLYQLLRGLKYMHS- 176
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A VIH DLKP N+L+++N + DFG+A+
Sbjct: 177 --AQVIHRDLKPSNLLVNENCELKIGDFGMAR 206
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 77/156 (49%), Gaps = 24/156 (15%)
Query: 500 IGRGGFGSVYKA---RLGDGMEVAVKVFN-----LQCGRAFKSFAVECEMMKSIRHRNLI 551
+G+G +G V+K+ R G+ + V K+F+ R F+ + E+ H N++
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVK-KIFDAFQNSTDAQRTFREIMILTELSG---HENIV 72
Query: 552 KVIS--SCSNEEFKALVLEYKPHGSLEKYLYS--SNCILDIFQRLNIMIDVASALEYLHF 607
+++ N+ LV +Y +E L++ IL+ + ++ + ++YLH
Sbjct: 73 NLLNVLRADNDRDVYLVFDY-----METDLHAVIRANILEPVHKQYVVYQLIKVIKYLHS 127
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643
G L +H D+KP N+LL+ ++DFG+++ +
Sbjct: 128 GGL---LHRDMKPSNILLNAECHVKVADFGLSRSFV 160
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 19/163 (11%)
Query: 500 IGRGGFGSVYKARLGDGME------VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY+ D ++ VAVK N R F E +MK ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILD---------IFQRLNIMIDVASALE 603
++ S + +V+E HG L+ YL S + + + + + ++A +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
YL+ +H DL N ++ + + DFG+ + + D
Sbjct: 142 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 181
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+++D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG 193
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 499 LIGRGGFGSVYKARLGDGMEV-AVKVFNL-----QCGRAFKSFAVECEMMKSIRHRNLIK 552
+IGRG FG V R +V A+K+ + + AF F E ++M +++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAFANSPWVVQ 138
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ + ++ + +V+EY P G L L S+ + + + R +V AL+ +H
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAIH---SMG 193
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFG 637
IH D+KPDN+LLD + L+DFG
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E + +++
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +VLEY P G + +L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 194
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 498 NLIGRGGFGSVYKARLGDGMEV-AVKVFNL-----QCGRAFKSFAVECEMMKSIRHRNLI 551
+IGRG FG V R +V A+K+ + + AF F E ++M ++
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAFANSPWVV 137
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
++ + ++ + +V+EY P G L L S+ + + + R +V AL+ +H
Sbjct: 138 QLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAIH---SM 192
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFG 637
IH D+KPDN+LLD + L+DFG
Sbjct: 193 GFIHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 151
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 186
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 19/163 (11%)
Query: 500 IGRGGFGSVYKARLGDGME------VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY+ D ++ VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILD---------IFQRLNIMIDVASALE 603
++ S + +V+E HG L+ YL S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
YL+ +H DL N ++ + + DFG+ + + D
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD 184
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 538 ECEMMKSIRHRNLIKVISSCSNEEFKAL--VLEYKPHGSLEKYLYSSNCILDIFQRLNIM 595
E ++++ +RH+N+I+++ NEE + + V+EY G E + Q
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 596 IDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ LEYLH ++H D+KP N+LL +S G+A+ L
Sbjct: 116 CQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 19/163 (11%)
Query: 500 IGRGGFGSVYKARLGDGME------VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY+ D ++ VAVK N R F E +MK ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILD---------IFQRLNIMIDVASALE 603
++ S + +V+E HG L+ YL S + + + + + ++A +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
YL+ +H DL N ++ + + DFG+ + + D
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD 183
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+++D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 193
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 179
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 214
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 15/165 (9%)
Query: 487 LCRATNGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGR-AFKSFAV-ECEMMK 543
C + + + IG+G FG V+KAR G +VA+K ++ + F A+ E ++++
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ 72
Query: 544 SIRHRNLIKVISSCSNEEFKA--------LVLEYKPHGSLEKYLYSSNCILDIFQRLNIM 595
++H N++ +I C + LV ++ H L L + + + +M
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVM 131
Query: 596 IDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+ + L Y+H ++H D+K NVL+ + V L+DFG+A+
Sbjct: 132 QMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 19/157 (12%)
Query: 500 IGRGGFGSVYKARLGDGME------VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY+ D ++ VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILD---------IFQRLNIMIDVASALE 603
++ S + +V+E HG L+ YL S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
YL+ +H DL N ++ + + DFG+ +
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGS-LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ + S EEF + L G+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDXELKILDFGLAR 173
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
IG G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 90
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 148
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 149 --ADIIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 11/137 (8%)
Query: 497 NNLIGRGGFGSVYKA---RLGD-----GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHR 548
N +G+G F ++K +GD EV +KV + +SF MM + H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 549 NLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
+L+ C + LV E+ GSL+ YL + ++I +L + +A A+ +L
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLEEN 132
Query: 609 CLAPVIHCDLKPDNVLL 625
L IH ++ N+LL
Sbjct: 133 TL---IHGNVCAKNILL 146
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 15/165 (9%)
Query: 487 LCRATNGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGR-AFKSFAV-ECEMMK 543
C + + + IG+G FG V+KAR G +VA+K ++ + F A+ E ++++
Sbjct: 12 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ 71
Query: 544 SIRHRNLIKVISSCSNEEFKA--------LVLEYKPHGSLEKYLYSSNCILDIFQRLNIM 595
++H N++ +I C + LV ++ H L L + + + +M
Sbjct: 72 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVM 130
Query: 596 IDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+ + L Y+H ++H D+K NVL+ + V L+DFG+A+
Sbjct: 131 QMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+++D ++DFG AK + G
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Query: 498 NLIGRGGFGSVYKA-RLGDG----MEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLI 551
++G G FG+VYK + DG + VA+KV +A K E +M + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
+++ C + LV + P+G L ++ + L LN + +A + YL L
Sbjct: 83 RLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRL- 140
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+H DL NVL+ ++DFG+A+LL
Sbjct: 141 --VHRDLAARNVLVKSPNHVKITDFGLARLL 169
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 489 RATNGFSENNLIGRGGFGSVYK--ARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR 546
R T F E IG G FGSV+K RL DG A+K R+ K A + ++R
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK-------RSKKPLAGSVDEQNALR 55
Query: 547 ----------HRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL---N 593
H ++++ S+ + ++ + EY GSL + + I+ F+ +
Sbjct: 56 EVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKD 115
Query: 594 IMIDVASALEYLHFGCLAPVIHCDLKPDNVLL 625
+++ V L Y+H L +H D+KP N+ +
Sbjct: 116 LLLQVGRGLRYIHSMSL---VHMDIKPSNIFI 144
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 12/152 (7%)
Query: 499 LIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRA---FKSFAVECEMMKSIRHRNLIKVI 554
++G GG V+ AR L +VAVKV R + F E + ++ H ++ V
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 555 SSCSNE----EFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
++ E +V+EY +L +++ + + + ++ D AL + H
Sbjct: 79 ATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-KRAIEVIADACQALNFSHQNG- 136
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+IH D+KP N+++ + DFGIA+ +
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+++D ++DFG AK + G
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-LIYQILRGLKYIHS- 143
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 489 RATNGFSENNLIGRGGFGSVYK--ARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR 546
R T F E IG G FGSV+K RL DG A+K R+ K A + ++R
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK-------RSKKPLAGSVDEQNALR 57
Query: 547 ----------HRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL---N 593
H ++++ S+ + ++ + EY GSL + + I+ F+ +
Sbjct: 58 EVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKD 117
Query: 594 IMIDVASALEYLHFGCLAPVIHCDLKPDNVLL 625
+++ V L Y+H L +H D+KP N+ +
Sbjct: 118 LLLQVGRGLRYIHSMSL---VHMDIKPSNIFI 146
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 90
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 148
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 149 --ADIIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 489 RATNGFSENNLIGRGGFGSVYK--ARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR 546
R T F E IG G FGSV+K RL DG A+K R+ K A + ++R
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK-------RSKKPLAGSVDEQNALR 59
Query: 547 ----------HRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL---N 593
H ++++ S+ + ++ + EY GSL + + I+ F+ +
Sbjct: 60 EVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKD 119
Query: 594 IMIDVASALEYLHFGCLAPVIHCDLKPDNVLL 625
+++ V L Y+H L +H D+KP N+ +
Sbjct: 120 LLLQVGRGLRYIHSMSL---VHMDIKPSNIFI 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 489 RATNGFSENNLIGRGGFGSVYK--ARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR 546
R T F E IG G FGSV+K RL DG A+K R+ K A + ++R
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK-------RSKKPLAGSVDEQNALR 57
Query: 547 ----------HRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL---N 593
H ++++ S+ + ++ + EY GSL + + I+ F+ +
Sbjct: 58 EVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKD 117
Query: 594 IMIDVASALEYLHFGCLAPVIHCDLKPDNVLL 625
+++ V L Y+H L +H D+KP N+ +
Sbjct: 118 LLLQVGRGLRYIHSMSL---VHMDIKPSNIFI 146
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 499 LIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI-RHRNL------ 550
L+G G +G VYK R + G A+KV ++ G + E M+K HRN+
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDV-TGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 551 -IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNC-ILDIFQRLNIMIDVASALEYLHFG 608
IK +++ LV+E+ GS+ + ++ L I ++ L +LH
Sbjct: 90 FIKKNPPGMDDQL-WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH-- 146
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
VIH D+K NVLL +N L DFG++ L
Sbjct: 147 -QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 23/154 (14%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNL 550
+G G +GSV Y ARL +VAVK + R F+S E ++K ++H N+
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVK----KLSRPFQSLIHARRTYRELRLLKHLKHENV 81
Query: 551 IKVIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 606
I ++ + S E+F + L G+ + + D + ++ + L+Y+H
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIH 140
Query: 607 FGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP NV ++++ + DFG+A+
Sbjct: 141 S---AGIIHRDLKPSNVAVNEDCELRILDFGLAR 171
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 96
Query: 553 VIS----SCSNEEFKALVLEYKPHGS-LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ + S EEF + L G+ L + D Q L + + L+Y+H
Sbjct: 97 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 154
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 155 ---ADIIHRDLKPSNLAVNEDXELKILDFGLAR 184
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 23/154 (14%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNL 550
+G G +GSV Y ARL +VAVK + R F+S E ++K ++H N+
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVK----KLSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 551 IKVIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 606
I ++ + S E+F + L G+ + + D + ++ + L+Y+H
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIH 148
Query: 607 FGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP NV ++++ + DFG+A+
Sbjct: 149 S---AGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
+ +GRG FG V++ + G + AVK L+ R + A C + S R ++
Sbjct: 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVA--CAGLSSPR---IVP 114
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ + + + +E GSL + + C+ + + L + LEYLH
Sbjct: 115 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLGQALEGLEYLH---TRR 170
Query: 613 VIHCDLKPDNVLL-DDNLVAYLSDFGIA 639
++H D+K DNVLL D A L DFG A
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHA 198
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 108
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 109 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 166
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 167 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
IG G G V A G +VAVK +L+ + + E +M+ H N++ + SS
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
+ +V+E+ G+L + ++ ++ Q + + V AL YLH VIH D+
Sbjct: 113 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIATVCLSVLRALSYLHNQG---VIHRDI 167
Query: 619 KPDNVLLDDNLVAYLSDFG 637
K D++LL + LSDFG
Sbjct: 168 KSDSILLTSDGRIKLSDFG 186
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 27/156 (17%)
Query: 500 IGRGGFGSVYKARLGDGME-VAVKVFNLQC------GRAFKSFAVECEMMKSIRHRNLIK 552
+G G +G VYKA E VA+K L+ G A + E ++K ++HRN+I+
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR----EVSLLKELQHRNIIE 97
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-FGC 609
+ S + L+ EY L+KY+ + D+ R+ + + + + + + H C
Sbjct: 98 LKSVIHHNHRLHLIFEYA-ENDLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSRRC 153
Query: 610 LAPVIHCDLKPDNVLL-----DDNLVAYLSDFGIAK 640
L H DLKP N+LL + V + DFG+A+
Sbjct: 154 L----HRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGS-LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ + S EEF + L G+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Query: 494 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
+ +GRG FG V++ + G + AVK L+ R + A C + S R ++
Sbjct: 76 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVA--CAGLSSPR---IVP 130
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ + + + +E GSL + + C+ + + L + LEYLH
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLGQALEGLEYLH---TRR 186
Query: 613 VIHCDLKPDNVLL-DDNLVAYLSDFGIA 639
++H D+K DNVLL D A L DFG A
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHA 214
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 143
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 108
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 109 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 166
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 167 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 105
Query: 553 VIS----SCSNEEFKALVLEYKPHGS-LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ + S EEF + L G+ L + D Q L + + L+Y+H
Sbjct: 106 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 163
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 164 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGS-LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ + S EEF + L G+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 104
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 105 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 162
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 163 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 83
Query: 553 VIS----SCSNEEFKALVLEYKPHGS-LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ + S EEF + L G+ L + D Q L + + L+Y+H
Sbjct: 84 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 141
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 142 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 171
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 143
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 90
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 148
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 149 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 87
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 145
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 84
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 85 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 142
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 143 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 172
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 27/171 (15%)
Query: 489 RATNGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIR 546
R F +GRGGFG V++A+ D A+K L A + E + + +
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 547 HRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLY---------------SSNCILDIFQR 591
H +++ ++ K + +P S + YLY + C ++ +R
Sbjct: 62 HPGIVRYFNAWLE---KNTTEKLQP-SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERER 117
Query: 592 ---LNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
L+I + +A A+E+LH L +H DLKP N+ + V + DFG+
Sbjct: 118 SVCLHIFLQIAEAVEFLHSKGL---MHRDLKPSNIFFTMDDVVKVGDFGLV 165
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 143
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 82
Query: 553 VIS----SCSNEEFKALVLEYKPHGS-LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ + S EEF + L G+ L + D Q L + + L+Y+H
Sbjct: 83 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 140
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 141 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 143
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 143
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 87
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 145
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGS-LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ + S EEF + L G+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 97
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 98 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 155
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 97
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 98 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 155
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 90
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 148
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 149 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 11/142 (7%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+GRG FG V++ + G + AVK L+ R + V C + S R ++ + +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE--LVACAGLSSPR---IVPLYGAVR 134
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
+ + +E GSL + + C+ + + L + LEYLH ++H D+
Sbjct: 135 EGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLGQALEGLEYLH---TRRILHGDV 190
Query: 619 KPDNVLL-DDNLVAYLSDFGIA 639
K DNVLL D A L DFG A
Sbjct: 191 KADNVLLSSDGSRAALCDFGHA 212
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 92
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 150
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 91
Query: 553 VIS----SCSNEEFKALVLEYKPHGS-LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ + S EEF + L G+ L + D Q L + + L+Y+H
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 149
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 150 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 17/160 (10%)
Query: 489 RATNGFSENNLIGRGGFGSVY-KARLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSIR 546
R N + IG G FG +Y + G EVA+K L+C + +E ++ K ++
Sbjct: 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK---LECVKTKHPQLHIESKIYKMMQ 62
Query: 547 HRNLIKVISSCSNE-EFKALVLEY-KPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
I I C E ++ +V+E P SLE + + L + + S +EY
Sbjct: 63 GGVGIPTIRWCGAEGDYNVMVMELLGP--SLEDLFNFCSRKFSLKTVLLLADQMISRIEY 120
Query: 605 LHFGCLAPVIHCDLKPDNVLL----DDNLVAYLSDFGIAK 640
+H IH D+KPDN L+ NLV Y+ DFG+AK
Sbjct: 121 IH---SKNFIHRDVKPDNFLMGLGKKGNLV-YIIDFGLAK 156
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 92
Query: 553 VIS----SCSNEEFKALVLEYKPHGS-LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ + S EEF + L G+ L + D Q L + + L+Y+H
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 150
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 151 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 87
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 145
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 82
Query: 553 VIS----SCSNEEFKALVLEYKPHGS-LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ + S EEF + L G+ L + D Q L + + L+Y+H
Sbjct: 83 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 140
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 141 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 25/169 (14%)
Query: 500 IGRGGFGSVYKARL-----GDGME-VAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIK 552
+G FG VYK L G+ + VA+K + G + F E + ++H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQR---------------LNIMID 597
++ + ++ +++ Y HG L ++L + D+ ++++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 598 VASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
+A+ +EYL V+H DL NVL+ D L +SD G+ + + D
Sbjct: 137 IAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAAD 182
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSF------AVECEMMKSIRHRNLIK 552
+G G +GSV + + G+++AVK + R F+S E ++K ++H N+I
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 114
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 115 LLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 172
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 173 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 202
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 92
Query: 553 VIS----SCSNEEFKALVLEYKPHGS-LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ + S EEF + L G+ L + D Q L + + L+Y+H
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 150
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 151 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 553 VIS----SCSNEEFKALVLEYKPHGS-LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ + S EEF + L G+ L + D Q L + + L+Y+H
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 139
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 140 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 92
Query: 553 VIS----SCSNEEFKALVLEYKPHGS-LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ + S EEF + L G+ L + D Q L + + L+Y+H
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 150
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 151 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 143
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFA---VECEMMKSIRH 547
N F L+G+G FG V + G A+K+ + A A E ++++ RH
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L + S + V+EY G L +L + R ++ SAL+YLH
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH- 268
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V++ DLK +N++LD + ++DFG+ K
Sbjct: 269 -SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 300
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 96
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 97 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 154
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 155 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 184
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 17/160 (10%)
Query: 489 RATNGFSENNLIGRGGFGSVY-KARLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSIR 546
R N + IG G FG +Y + G EVA+K L+C + +E ++ K ++
Sbjct: 4 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK---LECVKTKHPQLHIESKIYKMMQ 60
Query: 547 HRNLIKVISSCSNE-EFKALVLEY-KPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
I I C E ++ +V+E P SLE + + L + + S +EY
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGP--SLEDLFNFCSRKFSLKTVLLLADQMISRIEY 118
Query: 605 LHFGCLAPVIHCDLKPDNVLL----DDNLVAYLSDFGIAK 640
+H IH D+KPDN L+ NLV Y+ DFG+AK
Sbjct: 119 IH---SKNFIHRDVKPDNFLMGLGKKGNLV-YIIDFGLAK 154
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 499 LIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRA---FKSFAVECEMMKSIRHRNLIKVI 554
++G GG V+ AR L +VAVKV R + F E + ++ H ++ V
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 555 SSCSNE----EFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+ E +V+EY +L +++ + + + ++ D AL + H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-KRAIEVIADACQALNFSHQNG- 136
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+IH D+KP N+++ + DFGIA+ +
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 487 LCRAT-NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFA---VECEM 541
+ R T N F L+G+G FG V + G A+K+ + A A E +
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 62
Query: 542 MKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 601
+++ RH L + S + V+EY G L +L + R ++ SA
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSA 121
Query: 602 LEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
L+YLH V++ DLK +N++LD + ++DFG+ K
Sbjct: 122 LDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 158
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 491 TNGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVF---NLQCGRAFKSFAVECEMMKSI 545
++ + ++G+G FG V K ++ G E AVKV ++ +S E +++K +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
H N++K+ ++ + LV E G L + S ++ I+ V S + Y+
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 142
Query: 606 HFGCLAPVIHCDLKPDNVLLD 626
H ++H DLKP+N+LL+
Sbjct: 143 HKN---KIVHRDLKPENLLLE 160
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+++D ++DFG AK + G
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 491 TNGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVF---NLQCGRAFKSFAVECEMMKSI 545
++ + ++G+G FG V K ++ G E AVKV ++ +S E +++K +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
H N++K+ ++ + LV E G L + S ++ I+ V S + Y+
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 165
Query: 606 HFGCLAPVIHCDLKPDNVLLD 626
H ++H DLKP+N+LL+
Sbjct: 166 HKN---KIVHRDLKPENLLLE 183
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCGRAFKSFAVECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + + R ++ E ++K ++H N+I
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR----ELRLLKHMKHENVIG 97
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 98 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 155
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFK------SFAVECEMMKSIRHRNLIK 552
+G G F V K R G+E A K + RA + E +++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N L+LE G L +L + + + + + + + YLH +A
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTKKIA- 137
Query: 613 VIHCDLKPDNVLLDDNLVAY----LSDFGIA 639
H DLKP+N++L D + L DFG+A
Sbjct: 138 --HFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFK------SFAVECEMMKSIRHRNLIK 552
+G G F V K R G+E A K + RA + E +++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N L+LE G L +L + + + + + + + YLH +A
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTKKIA- 137
Query: 613 VIHCDLKPDNV-LLDDNL---VAYLSDFGIA 639
H DLKP+N+ LLD N+ L DFG+A
Sbjct: 138 --HFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFA---VECEMMKSIRH 547
N F L+G+G FG V + G A+K+ + A A E ++++ RH
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L + S + V+EY G L +L + R ++ SAL+YLH
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH- 265
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V++ DLK +N++LD + ++DFG+ K
Sbjct: 266 -SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 297
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 498 NLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMK------SIRHRNL 550
++G+G FG V AR+ + G AVKV L+ + VEC M + + H L
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKV--LKKDVILQDDDVECTMTEKRILSLARNHPFL 86
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
++ + V+E+ G L ++ S + R ++ SAL +LH
Sbjct: 87 TQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISALMFLH---D 142
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+I+ DLK DNVLLD L+DFG+ K
Sbjct: 143 KGIIYRDLKLDNVLLDHEGHCKLADFGMCK 172
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + S + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF-LIYQILRGLKYIHS- 143
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+ +
Sbjct: 144 --ADIIHRDLKPSNLAVNEDSELKILDFGLCR 173
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L K+ S + +V+EY P G + +L + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+++D ++DFG AK + G
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 91
Query: 553 VIS----SCSNEEFKALVLEYKPHGS-LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ + S EEF + L G+ L + D Q L + + L+Y+H
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 149
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 150 ---ADIIHRDLKPSNLAVNEDSELKILDFGLAR 179
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 491 TNGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVF---NLQCGRAFKSFAVECEMMKSI 545
++ + ++G+G FG V K ++ G E AVKV ++ +S E +++K +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
H N++K+ ++ + LV E G L + S ++ I+ V S + Y+
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 166
Query: 606 HFGCLAPVIHCDLKPDNVLLD 626
H ++H DLKP+N+LL+
Sbjct: 167 HKN---KIVHRDLKPENLLLE 184
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 141/323 (43%), Gaps = 82/323 (25%)
Query: 53 IADV----RLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRN 108
IAD+ L NL L L+ N + P + N + L+ LELS N+ S + L +
Sbjct: 97 IADITPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTS 152
Query: 109 LEWLNLRDNYLTSSTP------------------ELSFLSSLSNCKSL--TFIHLSD-NP 147
L+ L+ N +T P ++S L+ L+N +SL T +SD P
Sbjct: 153 LQQLSFSSNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP 212
Query: 148 LDGILSKTSIGNLS---HSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPI 204
L GIL T++ LS + LKD G +TNLT+ +DL N+++ P
Sbjct: 213 L-GIL--TNLDELSLNGNQLKDI---------GTLASLTNLTD---LDLANNQISNLAP- 256
Query: 205 TLSXXXXXXXXXXXXNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILS 264
+ LT+L EL+LG N++ P + L +L L
Sbjct: 257 -------------------------LSGLTKLTELKLGANQISNISP--LAGLTALTNLE 289
Query: 265 LSSNELTSI-PLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPT 323
L+ N+L I P++ NLK++ L N ++ P + +L L + FS N S V +
Sbjct: 290 LNENQLEDISPIS--NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKVSDV--S 343
Query: 324 EIGGLKNLEYLFLGYNRLEGSIP 346
+ L N+ +L G+N++ P
Sbjct: 344 SLANLTNINWLSAGHNQISDLTP 366
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 44/221 (19%)
Query: 6 ISNLQNLEELDLRHNKLVG-TVPAAIFNMSMXXXXXXXXXXXXXXXSSIADVR----LPN 60
++NL LE LD+ NK+ +V A + N+ + I+D+ L N
Sbjct: 169 LANLTTLERLDISSNKVSDISVLAKLTNLE----------SLIATNNQISDITPLGILTN 218
Query: 61 LEALLLWGNNFS--GTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNY 118
L+ L L GN GT+ + L+ L+L+ N S P L L L L N
Sbjct: 219 LDELSLNGNQLKDIGTLASL----TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ 272
Query: 119 LTSSTP---------------ELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHS 163
+++ +P +L +S +SN K+LT++ L N + I +S+
Sbjct: 273 ISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL----TK 328
Query: 164 LKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPI 204
L+ + SN VS + NLTN + G N+++ P+
Sbjct: 329 LQRLFFSNNKVSD--VSSLANLTNINWLSAGHNQISDLTPL 367
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 280 LKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYN 339
L ++ Q+NFS+N LT PL+ NL L+ I + N + + P + L NL L L N
Sbjct: 62 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 340 RLEGSIP 346
++ P
Sbjct: 118 QITDIDP 124
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 91
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 149
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 87
Query: 553 VIS----SCSNEEFKALVLEYKPHGS-LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ + S EEF + L G+ L + D Q L + + L+Y+H
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 145
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 146 ---ADIIHRDLKPSNLAVNEDSELKILDFGLAR 175
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFK------SFAVECEMMKSIRHRNLIK 552
+G G F V K R G+E A K + RA + E +++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N L+LE G L +L + + + + + + + YLH +A
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTKKIA- 137
Query: 613 VIHCDLKPDNV-LLDDNL---VAYLSDFGIA 639
H DLKP+N+ LLD N+ L DFG+A
Sbjct: 138 --HFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 12/160 (7%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQ-CGRAFKSFAVECEMMKSIRHRN 549
+ + +IG G V A E VA+K NL+ C + E + M H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 550 LIKVISSCSNEEFKALVLEYKPHGS---LEKYLYSS----NCILDIFQRLNIMIDVASAL 602
++ +S ++ LV++ GS + K++ + + +LD I+ +V L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 603 EYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
EYLH IH D+K N+LL ++ ++DFG++ L
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFL 166
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 12/160 (7%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQ-CGRAFKSFAVECEMMKSIRHRN 549
+ + +IG G V A E VA+K NL+ C + E + M H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 550 LIKVISSCSNEEFKALVLEYKPHGS---LEKYLYSS----NCILDIFQRLNIMIDVASAL 602
++ +S ++ LV++ GS + K++ + + +LD I+ +V L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 603 EYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
EYLH IH D+K N+LL ++ ++DFG++ L
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFL 171
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 220 NKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPL-TFW 278
N+++ D L ELEL N + P F+NL +LR L L SN L IPL F
Sbjct: 42 NRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFT 101
Query: 279 NLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFL 336
L ++ +L+ S N + L +L L ++ N+ + GL +LE L L
Sbjct: 102 GLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL 159
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 128/324 (39%), Gaps = 60/324 (18%)
Query: 58 LPNLEALLLWGNNFSGTIPRFIFNA-SKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRD 116
+P LL G N T+ + F + L LEL++N S P F NL NL L LR
Sbjct: 30 IPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89
Query: 117 NYLTSSTPELSFLSSLSNCKSLTFIHLSDNP----LDGI------LSKTSIGN-----LS 161
N L L + LSN LT + +S+N LD + L +G+ +S
Sbjct: 90 NRL--KLIPLGVFTGLSN---LTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYIS 144
Query: 162 H-------SLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSXXXXXXX 214
H SL+ + CN++ E +++L I + L +N
Sbjct: 145 HRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNIN--------------- 189
Query: 215 XXXXXNKLEGSIPD-SICRLTELYELELGGNKLFGSI-PACFSNLASLRILSLSSNELTS 272
+I D S RL L LE+ ++ P C L +L LS++ LT+
Sbjct: 190 ----------AIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL-NLTSLSITHCNLTA 238
Query: 273 IP-LTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNL 331
+P L +L + LN S N ++ + L L I + V P GL L
Sbjct: 239 VPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYL 298
Query: 332 EYLFLGYNR---LEGSIPDSFGDL 352
L + N+ LE S+ S G+L
Sbjct: 299 RVLNVSGNQLTTLEESVFHSVGNL 322
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 99/279 (35%), Gaps = 34/279 (12%)
Query: 174 VSGGIPEEITNLTNSITIDLGGNKLNGSIPI-TLSXXXXXXXXXXXXNKLEGSIPDSICR 232
VS P NL N T+ L N+L IP+ + NK+ +
Sbjct: 68 VSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQD 126
Query: 233 LTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIP--------------LTFW 278
L L LE+G N L FS L SL L+L LTSIP L
Sbjct: 127 LYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHL 186
Query: 279 NLKDILQLNFSSNFLTGPLP------LEIGNLKVLIGIDF-----SMNNFSSVIPTEIGG 327
N+ I +F + L L+ L G++ + N ++V +
Sbjct: 187 NINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRH 246
Query: 328 LKNLEYLFLGYN---RLEGSIPDSFGDLIXXXXXXXXXXXXXGAIPTSLEKLSYLEDLNL 384
L L +L L YN +EGS+ +L+ P + L+YL LN+
Sbjct: 247 LVYLRFLNLSYNPISTIEGSM---LHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNV 303
Query: 385 SFNKLEG-EIPRGGSFGNFAAESFEGNELLCGSPTLQVL 422
S N+L E S GN + N L C L V
Sbjct: 304 SGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVF 342
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFK------SFAVECEMMKSIRHRNLIK 552
+G G F V K R G+E A K + RA + E +++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N L+LE G L +L + + + + + + + YLH +A
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTKKIA- 137
Query: 613 VIHCDLKPDNV-LLDDNL---VAYLSDFGIA 639
H DLKP+N+ LLD N+ L DFG+A
Sbjct: 138 --HFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFK------SFAVECEMMKSIRHRNLIK 552
+G G F V K R G+E A K + RA + E +++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N L+LE G L +L + + + + + + + YLH +A
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTKKIA- 137
Query: 613 VIHCDLKPDNV-LLDDNL---VAYLSDFGIA 639
H DLKP+N+ LLD N+ L DFG+A
Sbjct: 138 --HFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 20/115 (17%)
Query: 537 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSL------EKYLYSSNCILDIFQ 590
E E++K + H +IK+ + E++ +VLE G L K L + C L +Q
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 591 RLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLL 642
L A++YLH +IH DLKP+NVLL +++ + ++DFG +K+L
Sbjct: 123 ML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 20/115 (17%)
Query: 537 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSL------EKYLYSSNCILDIFQ 590
E E++K + H +IK+ + E++ +VLE G L K L + C L +Q
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 591 RLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLL 642
L A++YLH +IH DLKP+NVLL +++ + ++DFG +K+L
Sbjct: 129 ML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 173
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 20/115 (17%)
Query: 537 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSL------EKYLYSSNCILDIFQ 590
E E++K + H +IK+ + E++ +VLE G L K L + C L +Q
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 591 RLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLL 642
L A++YLH +IH DLKP+NVLL +++ + ++DFG +K+L
Sbjct: 122 ML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 166
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 20/115 (17%)
Query: 537 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSL------EKYLYSSNCILDIFQ 590
E E++K + H +IK+ + E++ +VLE G L K L + C L +Q
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 591 RLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLL 642
L A++YLH +IH DLKP+NVLL +++ + ++DFG +K+L
Sbjct: 123 ML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 140/323 (43%), Gaps = 82/323 (25%)
Query: 53 IADV----RLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRN 108
IAD+ L NL L L+ N + P + N + L+ LELS N+ S + L +
Sbjct: 97 IADITPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTS 152
Query: 109 LEWLNLRDNYLTSSTP------------------ELSFLSSLSNCKSL--TFIHLSD-NP 147
L+ LN N +T P ++S L+ L+N +SL T +SD P
Sbjct: 153 LQQLNFSSNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP 212
Query: 148 LDGILSKTSIGNLS---HSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPI 204
L GIL T++ LS + LKD G +TNLT+ +DL N+++ P
Sbjct: 213 L-GIL--TNLDELSLNGNQLKDI---------GTLASLTNLTD---LDLANNQISNLAP- 256
Query: 205 TLSXXXXXXXXXXXXNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILS 264
+ LT+L EL+LG N++ P + L +L L
Sbjct: 257 -------------------------LSGLTKLTELKLGANQISNISP--LAGLTALTNLE 289
Query: 265 LSSNELTSI-PLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPT 323
L+ N+L I P++ NLK++ L N ++ P + +L L + F N S V +
Sbjct: 290 LNENQLEDISPIS--NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--S 343
Query: 324 EIGGLKNLEYLFLGYNRLEGSIP 346
+ L N+ +L G+N++ P
Sbjct: 344 SLANLTNINWLSAGHNQISDLTP 366
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 280 LKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYN 339
L ++ Q+NFS+N LT PL+ NL L+ I + N + + P + L NL L L N
Sbjct: 62 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 340 RLEGSIP 346
++ P
Sbjct: 118 QITDIDP 124
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 38/177 (21%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
F E LIG GGFG V+KA+ DG ++ +A + E + + + H N++
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIVH 69
Query: 553 VI-----------------------------SSCSNEEFKALVLEYKPHGSLEKYLYSSN 583
SS S + + +E+ G+LE+++
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 129
Query: 584 C-ILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
LD L + + ++Y+H L IH DLKP N+ L D + DFG+
Sbjct: 130 GEKLDKVLALELFEQITKGVDYIHSKKL---IHRDLKPSNIFLVDTKQVKIGDFGLV 183
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 20/115 (17%)
Query: 537 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSL------EKYLYSSNCILDIFQ 590
E E++K + H +IK+ + E++ +VLE G L K L + C L +Q
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 591 RLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLL 642
L A++YLH +IH DLKP+NVLL +++ + ++DFG +K+L
Sbjct: 123 ML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFA---VECEMMKSIRH 547
N F L+G+G FG V + G A+K+ + A A E ++++ RH
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L + S + V+EY G L +L + R ++ SAL+YLH
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH- 125
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V++ DLK +N++LD + ++DFG+ K
Sbjct: 126 -SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 157
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 28/173 (16%)
Query: 489 RATNGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CGRAFKSFAVECEMMKSI 545
R T + +G+G F V + ++ G E A + N + R + E + + +
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSL-----EKYLYS----SNCILDIFQRLNIMI 596
+H N++++ S S E L+ + G L + YS S+CI I + +
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV---- 123
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNL---VAYLSDFGIAKLLIGED 646
LH + V+H +LKP+N+LL L L+DFG+A + GE
Sbjct: 124 --------LHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 20/115 (17%)
Query: 537 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSL------EKYLYSSNCILDIFQ 590
E E++K + H +IK+ + E++ +VLE G L K L + C L +Q
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 591 RLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLL 642
L A++YLH +IH DLKP+NVLL +++ + ++DFG +K+L
Sbjct: 262 ML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 306
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 20/115 (17%)
Query: 537 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSL------EKYLYSSNCILDIFQ 590
E E++K + H +IK+ + E++ +VLE G L K L + C L +Q
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 591 RLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLL 642
L A++YLH +IH DLKP+NVLL +++ + ++DFG +K+L
Sbjct: 248 ML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 292
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 20/158 (12%)
Query: 497 NNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRHRNLIK 552
++ GGF VY+A+ +G G E A+K L K+ A+ C M K H N+++
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALK--RLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ 90
Query: 553 VISSCS---------NEEFKALVLEYKPHGSLEKYL--YSSNCILDIFQRLNIMIDVASA 601
S+ S EF L+L G L ++L S L L I A
Sbjct: 91 FCSAASIGKEESDTGQAEF--LLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 602 LEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
++++H P+IH DLK +N+LL + L DFG A
Sbjct: 149 VQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 25/176 (14%)
Query: 481 TFSYLELCRATNGFSE--NNL--IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSF 535
TF EL + E NL +G G +GSV A G VAVK + R F+S
Sbjct: 3 TFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSI 58
Query: 536 A------VECEMMKSIRHRNLIKVIS----SCSNEEFKALVLEYKPHGS-LEKYLYSSNC 584
E ++K ++H N+I ++ + S EEF + L G+ L + +
Sbjct: 59 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKL 118
Query: 585 ILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
D Q L + + L+Y+H A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 119 TDDHVQFL--IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 491 TNGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVF---NLQCGRAFKSFAVECEMMKSI 545
++ + ++G+G FG V K ++ G E AVKV ++ +S E +++K +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
H N++K+ ++ + LV E G L + S ++ I+ V S + Y+
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 148
Query: 606 HFGCLAPVIHCDLKPDNVLLD 626
H ++H DLKP+N+LL+
Sbjct: 149 HKN---KIVHRDLKPENLLLE 166
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 12/160 (7%)
Query: 491 TNGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRA---FKSFAVECEMMKSIR 546
++ + ++G GG V+ AR L +VAVKV R + F E + ++
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 547 HRNLIKVISSCSNEE----FKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASAL 602
H ++ V + E +V+EY +L +++ + + + ++ D AL
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-KRAIEVIADACQAL 146
Query: 603 EYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ H +IH D+KP N+++ + DFGIA+ +
Sbjct: 147 NFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI 183
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 19/163 (11%)
Query: 500 IGRGGFGSVYKARLGDGME------VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY+ D ++ VAVK N R F E +MK ++++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILD---------IFQRLNIMIDVASALE 603
++ S + +V+E HG L+ YL S + + + + + ++A +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
YL+ +H +L N ++ + + DFG+ + + D
Sbjct: 146 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD 185
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 19/163 (11%)
Query: 500 IGRGGFGSVYKARLGDGME------VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY+ D ++ VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILD---------IFQRLNIMIDVASALE 603
++ S + +V+E HG L+ YL S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
YL+ +H +L N ++ + + DFG+ + + D
Sbjct: 145 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD 184
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFA---VECEMMKSIRH 547
N F L+G+G FG V + G A+K+ + A A E ++++ RH
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L + S + V+EY G L +L + R ++ SAL+YLH
Sbjct: 70 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH- 127
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V++ DLK +N++LD + ++DFG+ K
Sbjct: 128 -SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 159
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRAFKSFAVECEMMKSIRHRNLIKVI 554
IG G FG V Y + M VA+K N + F E M+ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
+ E +++E G L +L LD+ + +++AL YL +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES---KRFV 133
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
H D+ NVL+ N L DFG+++ +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM 161
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 496 ENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR-HRNLIKV 553
+ +++G G V L E AVK+ Q G E EM+ + HRN++++
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 554 ISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPV 613
I E+ LV E GS+ +++ ++ + ++ DVASAL++LH +A
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDVASALDFLHNKGIA-- 133
Query: 614 IHCDLKPDNVLLDD-NLVA--YLSDFGIA 639
H DLKP+N+L + N V+ + DFG+
Sbjct: 134 -HRDLKPENILCEHPNQVSPVKICDFGLG 161
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRAFKSFAVECEMMKSIRHRNLIKVI 554
IG G FG V Y + M VA+K N + F E M+ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
+ E +++E G L +L LD+ + +++AL YL +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---KRFV 133
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
H D+ NVL+ N L DFG+++ +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM 161
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G VAVK + R F+S E ++K ++H N+I
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 105
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 106 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 163
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 537 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI 596
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 419 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 476
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
V+ ++YL + +H DL NVLL A +SDFG++K L ++
Sbjct: 477 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 523
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G VAVK + R F+S E ++K ++H N+I
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 105
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 106 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 163
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G VAVK + R F+S E ++K ++H N+I
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 104
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 105 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 162
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 163 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 143
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + D+G+A+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDYGLAR 173
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 537 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI 596
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 420 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 477
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
V+ ++YL +H DL NVLL A +SDFG++K L ++
Sbjct: 478 QVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADE 524
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 143
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 143
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRAFKSFAVECEMMKSIRHRNLIKVI 554
IG G FG V Y + M VA+K N + F E M+ H +++K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
+ E +++E G L +L LD+ + +++AL YL +
Sbjct: 458 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF---V 513
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
H D+ NVL+ N L DFG+++ +
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYM 541
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 21/153 (13%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G VAVK + R F+S E ++K ++H N+I
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 553 VIS----SCSNEEFKALVLEYKPHGS-LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ + S EEF + L G+ L + D Q L + + L+Y+H
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 139
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 140 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 143
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G VAVK + R F+S E ++K ++H N+I
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 95
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 96 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 153
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 154 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 183
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G VAVK + R F+S E ++K ++H N+I
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 139
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 10/153 (6%)
Query: 500 IGRGGFGSVYK-ARLGDGMEVAVKVFNL-QCGRAFKSFAV-ECEMMKSIRHRNLIKVISS 556
IG G +G K R DG + K + A K V E +++ ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 557 CSNEEFKAL--VLEYKPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLHFGCLA 611
+ L V+EY G L + LD L +M + AL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 612 --PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+H DLKP NV LD L DFG+A++L
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFK------SFAVECEMMKSIRHRNLIK 552
+G G F V K R G+E A K + RA + E +++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N L+LE G L +L + + + + + + + YLH +A
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-EEATSFIKQILDGVNYLHTKKIA- 137
Query: 613 VIHCDLKPDNV-LLDDNL---VAYLSDFGIA 639
H DLKP+N+ LLD N+ L DFG+A
Sbjct: 138 --HFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 140/324 (43%), Gaps = 85/324 (26%)
Query: 53 IADV----RLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIP-------- 100
IAD+ L NL L L+ N + P + N + L+ LELS N+ S
Sbjct: 97 IADITPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQ 154
Query: 101 -----------NTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSL--TFIHLSD-N 146
NL LE L++ N ++ ++S L+ L+N +SL T +SD
Sbjct: 155 QLNFGNQVTDLKPLANLTTLERLDISSNKVS----DISVLAKLTNLESLIATNNQISDIT 210
Query: 147 PLDGILSKTSIGNLS---HSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIP 203
PL GIL T++ LS + LKD G +TNLT+ +DL N+++ P
Sbjct: 211 PL-GIL--TNLDELSLNGNQLKDI---------GTLASLTNLTD---LDLANNQISNLAP 255
Query: 204 ITLSXXXXXXXXXXXXNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRIL 263
+ LT+L EL+LG N++ P + L +L L
Sbjct: 256 --------------------------LSGLTKLTELKLGANQISNISP--LAGLTALTNL 287
Query: 264 SLSSNELTSI-PLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIP 322
L+ N+L I P++ NLK++ L N ++ P + +L L + FS N S V
Sbjct: 288 ELNENQLEDISPIS--NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKVSDV-- 341
Query: 323 TEIGGLKNLEYLFLGYNRLEGSIP 346
+ + L N+ +L G+N++ P
Sbjct: 342 SSLANLTNINWLSAGHNQISDLTP 365
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 44/221 (19%)
Query: 6 ISNLQNLEELDLRHNKLVG-TVPAAIFNMSMXXXXXXXXXXXXXXXSSIADVR----LPN 60
++NL LE LD+ NK+ +V A + N+ + I+D+ L N
Sbjct: 168 LANLTTLERLDISSNKVSDISVLAKLTNLE----------SLIATNNQISDITPLGILTN 217
Query: 61 LEALLLWGNNFS--GTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNY 118
L+ L L GN GT+ + L+ L+L+ N S P L L L L N
Sbjct: 218 LDELSLNGNQLKDIGTLASL----TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ 271
Query: 119 LTSSTP---------------ELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHS 163
+++ +P +L +S +SN K+LT++ L N + I +S+
Sbjct: 272 ISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL----TK 327
Query: 164 LKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPI 204
L+ + SN VS + NLTN + G N+++ P+
Sbjct: 328 LQRLFFSNNKVSD--VSSLANLTNINWLSAGHNQISDLTPL 366
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 27/130 (20%)
Query: 280 LKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIP----------------- 322
L ++ Q+NFS+N LT PL+ NL L+ I + N + + P
Sbjct: 62 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQI 119
Query: 323 TEIGGLKNLEYLFLGYNRLEGSIPDSFGDLIXXXXXXXXXXXXXGAIPTSLE---KLSYL 379
T+I LKNL L NRLE S ++ D+ G T L+ L+ L
Sbjct: 120 TDIDPLKNLTNL----NRLELS-SNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTTL 174
Query: 380 EDLNLSFNKL 389
E L++S NK+
Sbjct: 175 ERLDISSNKV 184
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 31/195 (15%)
Query: 461 RKRGKQPSNDANMPLVAT-WRTFSYLELCRATNGFSENNLIGRGGFGSVYKARLGDGME- 518
RK+ A+MP + W+ E+ +LIG G +G V +A D +E
Sbjct: 30 RKQHHSSKPTASMPRPHSDWQIPDRYEI---------RHLIGTGSYGHVCEA--YDKLEK 78
Query: 519 --VAVK----VFN--LQCGRAFKSFAVECEMMKSIRHRNLIKVISSC---SNEEFKALVL 567
VA+K VF + C R + A+ + + H +++KV+ E+F L +
Sbjct: 79 RVVAIKKILRVFEDLIDCKRILREIAI----LNRLNHDHVVKVLDIVIPKDVEKFDELYV 134
Query: 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD 627
+ S K L+ + L ++ ++ ++Y+H A ++H DLKP N L++
Sbjct: 135 VLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQ 191
Query: 628 NLVAYLSDFGIAKLL 642
+ + DFG+A+ +
Sbjct: 192 DCSVKVCDFGLARTV 206
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 10/153 (6%)
Query: 500 IGRGGFGSVYK-ARLGDGMEVAVKVFNL-QCGRAFKSFAV-ECEMMKSIRHRNLIKVISS 556
IG G +G K R DG + K + A K V E +++ ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 557 CSNEEFKAL--VLEYKPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLHFGCLA 611
+ L V+EY G L + LD L +M + AL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 612 --PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+H DLKP NV LD L DFG+A++L
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 220 NKLEGSIPDSICRLTELYELELGGNKLFGSIP-ACFSNLASLRILSLSSNELTSIP-LTF 277
KLE + DS+ L ELY LG N+L G++P F +L L +L L +N+LT +P F
Sbjct: 53 TKLEPGVFDSLINLKELY---LGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVLPSAVF 108
Query: 278 WNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFL 336
L + +L N LT LP I L L + N S+ L +L + +L
Sbjct: 109 DRLVHLKELFMCCNKLTE-LPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYL 166
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 33/157 (21%)
Query: 244 NKLFGSIPACFSNLASLRILSLSSNELTSI-PLTFWNLKDILQLNFSSNFLTGPLPLEI- 301
+K S+PA A +IL L N++T + P F +L ++ +L SN L G LP+ +
Sbjct: 28 SKRHASVPAGIPTNA--QILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVF 84
Query: 302 GNLKVLIGIDFSMNNFSSVIPTEI-GGLKNLEYLFLGYNRLEGSIPDSFGDLIXXXXXXX 360
+L L +D N + V+P+ + L +L+ LF+ N+L
Sbjct: 85 DSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT------------------ 125
Query: 361 XXXXXXGAIPTSLEKLSYLEDLNLSFNKLEGEIPRGG 397
+P +E+L++L L L N+L+ IP G
Sbjct: 126 -------ELPRGIERLTHLTHLALDQNQLKS-IPHGA 154
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 164 LKDFYMSNCNVSGGIPEEI-TNLTNSITIDLGGNKLNGSIPITLSXXXXXXXXXXXXNKL 222
LK+ Y+ + N G +P + +LT +DLG N+L NKL
Sbjct: 66 LKELYLGS-NQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKL 124
Query: 223 EGSIPDSICRLTELYELELGGNKLFGSIP-ACFSNLASL 260
+P I RLT L L L N+L SIP F L+SL
Sbjct: 125 T-ELPRGIERLTHLTHLALDQNQL-KSIPHGAFDRLSSL 161
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY G + +L + R + EYLH
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 145
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D+ ++DFG AK + G
Sbjct: 146 --SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG 180
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 10/178 (5%)
Query: 471 ANMPLVATWRTFSYLELCRATNGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCG 529
A + W T S + + F +G G FG V + + G A+K+ + Q
Sbjct: 43 AKEDFLKKWETPS--QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 100
Query: 530 RAFKSFAV---ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCIL 586
K E +++++ L+K+ S + +V+EY G + +L
Sbjct: 101 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX 160
Query: 587 DIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+ R + EYLH +I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 161 EPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 214
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY G + +L + R + EYLH
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 153
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 154 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 188
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 233 LTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNF 292
LT LY L GN L +PA NL++LR+L LS N LTS+P + + F N
Sbjct: 249 LTRLY---LNGNSL-TELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNM 304
Query: 293 LTGPLPLEIGNL 304
+T LP E GNL
Sbjct: 305 VTT-LPWEFGNL 315
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 1 EIPLEISNLQNLEELDLRHNKLVGTVPAAI 30
E+P EI NL NL LDL HN+L ++PA +
Sbjct: 261 ELPAEIKNLSNLRVLDLSHNRLT-SLPAEL 289
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 114/285 (40%), Gaps = 65/285 (22%)
Query: 106 LRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLK 165
L NLE+LNL N +T +P LSN LT +++ N + I +++ NL++ L+
Sbjct: 65 LTNLEYLNLNGNQITDISP-------LSNLVKLTNLYIGTNKITDI---SALQNLTN-LR 113
Query: 166 DFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGS 225
+ Y++ N+S P + NLT +++LG N N S LS +K++
Sbjct: 114 ELYLNEDNISDISP--LANLTKXYSLNLGANH-NLSDLSPLSNXTGLNYLTVTESKVKDV 170
Query: 226 IPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQ 285
P I LT+LY L L N++ P ++L SL + N++T I N +
Sbjct: 171 TP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDIT-PVANXTRLNS 225
Query: 286 LNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTE--------------------- 324
L +N +T PL NL L ++ N S + +
Sbjct: 226 LKIGNNKITDLSPL--ANLSQLTWLEIGTNQISDINAVKDLTKLKXLNVGSNQISDISVL 283
Query: 325 -----------------------IGGLKNLEYLFLGYNRLEGSIP 346
IGGL NL LFL N + P
Sbjct: 284 NNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRP 328
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G VAVK + R F+S E ++K ++H N+I
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 91
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 149
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 10/153 (6%)
Query: 500 IGRGGFGSVYK-ARLGDGMEVAVKVFNL-QCGRAFKSFAV-ECEMMKSIRHRNLIKVISS 556
IG G +G K R DG + K + A K V E +++ ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 557 CSNEEFKAL--VLEYKPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLHFGCLA 611
+ L V+EY G L + LD L +M + AL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 612 --PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+H DLKP NV LD L DFG+A++L
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 499 LIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAV--ECEMMKSIRHRNLIKVIS 555
++G+G FG V K + E AVKV N + + + E E++K + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 556 SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIH 615
+ +V E G L + + I+ V S + Y+H ++H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMH---KHNIVH 144
Query: 616 CDLKPDNVLLD 626
DLKP+N+LL+
Sbjct: 145 RDLKPENILLE 155
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 232 RLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIP-LTFWNLKDILQLNFSS 290
LT L +L LGGNKL F+ L SL L+LS+N+L S+P F L + +L ++
Sbjct: 50 ELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNT 109
Query: 291 NFLTGPLPLEI-GNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIP 346
N L LP + L L + N SV L +L+Y++L N + + P
Sbjct: 110 NQLQS-LPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 225 SIPDSICRLTELYELELGGNKLFGSIP-ACFSNLASLRILSLSSNELTSIPLTFWN-LKD 282
S+P I T +LE K S+P F L SL L L N+L S+P +N L
Sbjct: 21 SVPTGIPAQTTYLDLETNSLK---SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTS 77
Query: 283 ILQLNFSSNFLTGPLPLEI-GNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRL 341
+ LN S+N L LP + L L + + N S+ L L+ L L N+L
Sbjct: 78 LTYLNLSTNQLQS-LPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQL 136
Query: 342 EGSIPDSFGD 351
+ S+PD D
Sbjct: 137 K-SVPDGVFD 145
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 3/127 (2%)
Query: 9 LQNLEELDLRHNKLVGTVPAAIFNMSMXXXXXXXXXXXXXXXSSIADVRLPNLEALLLWG 68
L +L +L L NKL ++P +FN + +L L+ L L
Sbjct: 51 LTSLTQLYLGGNKL-QSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNT 109
Query: 69 NNFSGTIPRFIFNA-SKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELS 127
N ++P +F+ ++L L L QN F L +L+++ L DN + P +
Sbjct: 110 NQLQ-SLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIR 168
Query: 128 FLSSLSN 134
+LS N
Sbjct: 169 YLSEWIN 175
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 220 NKLEGSIPDSIC-RLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIP 274
NKL+ S+P+ + +LT L L L N+L F L L+ L+L++N+L S+P
Sbjct: 62 NKLQ-SLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLP 116
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 10/178 (5%)
Query: 471 ANMPLVATWRTFSYLELCRATNGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCG 529
A + W T S + + F +G G FG V + + G A+K+ + Q
Sbjct: 22 AKEDFLKKWETPS--QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 530 RAFKSFAV---ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCIL 586
K E +++++ L+K+ S + +V+EY G + +L
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 587 DIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+ R + EYLH L I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 140 EPHARF-YAAQIVLTFEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRAFKSFAVECEMMKSIRHRNLIKVI 554
IG G FG V Y + + VA+K N + F E M+ H +++K+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
+ E +++E G L +L LD+ + +++AL YL +
Sbjct: 106 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---KRFV 161
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
H D+ NVL+ N L DFG+++ +
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYM 189
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY G + +L + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 179
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 214
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
L I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 160 LDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 485 LELCRATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCGRAFKSFAVECEMMK 543
L++ F + ++G+G FG V+ A + A+K L+ VEC M++
Sbjct: 11 LQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVE 68
Query: 544 ------SIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMID 597
+ H L + + +E V+EY G L ++ S + D+ + +
Sbjct: 69 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAE 127
Query: 598 VASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+ L++LH +++ DLK DN+LLD + ++DFG+ K
Sbjct: 128 IILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK 167
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 496 ENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR-HRNLIKV 553
+ +++G G V L E AVK+ Q G E EM+ + HRN++++
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 554 ISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPV 613
I E+ LV E GS+ +++ ++ + ++ DVASAL++LH +A
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDVASALDFLHNKGIA-- 133
Query: 614 IHCDLKPDNVLLD 626
H DLKP+N+L +
Sbjct: 134 -HRDLKPENILCE 145
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCGRAFKSF-AVECEMMKSIRHRNLI 551
F++ IG+G FG V+K +V A+K+ +L+ E ++ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
K S +++EY GS L + D FQ ++ ++ L+YLH
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP--FDEFQIATMLKEILKGLDYLH---SE 139
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
IH D+K NVLL + L+DFG+A
Sbjct: 140 KKIHRDIKAANVLLSEQGDVKLADFGVA 167
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
L I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 160 LDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 491 TNGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVF---NLQCGRAFKSFAVECEMMKSI 545
++ + ++G+G FG V K ++ G E AVKV ++ +S E +++K +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 605
H N+ K+ ++ + LV E G L + S ++ I+ V S + Y
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYX 142
Query: 606 HFGCLAPVIHCDLKPDNVLLD 626
H ++H DLKP+N+LL+
Sbjct: 143 HKN---KIVHRDLKPENLLLE 160
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 537 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI 596
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 118
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
V+ ++YL + +H DL NVLL A +SDFG++K L ++
Sbjct: 119 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 165
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY G + +L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+L+D ++DFG AK + G
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRAFKSFAVECEMMKSIRHRNLIKVI 554
IG G FG V Y + + VA+K N + F E M+ H +++K+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
+ E +++E G L +L LD+ + +++AL YL +
Sbjct: 83 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---KRFV 138
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
H D+ NVL+ N L DFG+++ +
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYM 166
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 537 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI 596
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 55 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 112
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
V+ ++YL + +H DL NVLL A +SDFG++K L ++
Sbjct: 113 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 159
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 537 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI 596
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 118
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
V+ ++YL + +H DL NVLL A +SDFG++K L ++
Sbjct: 119 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 165
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRAFKSFAVECEMMKSIRHRNLIKVI 554
IG G FG V Y + + VA+K N + F E M+ H +++K+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
+ E +++E G L +L LD+ + +++AL YL +
Sbjct: 81 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---KRFV 136
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
H D+ NVL+ N L DFG+++ +
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYM 164
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCGRAFKSF-AVECEMMKSIRHRNLI 551
F++ IG+G FG V+K +V A+K+ +L+ E ++ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
K S + +++EY GS L LD Q I+ ++ L+YLH
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHS---E 143
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
IH D+K NVLL ++ L+DFG+A
Sbjct: 144 KKIHRDIKAANVLLSEHGEVKLADFGVA 171
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRAFKSFAVECEMMKSIRHRNLIKVI 554
IG G FG V Y + + VA+K N + F E M+ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
+ E +++E G L +L LD+ + +++AL YL +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---KRFV 133
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
H D+ NVL+ N L DFG+++ +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM 161
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 19/157 (12%)
Query: 500 IGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY K + D E VA+K N R F E +MK ++++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALE 603
++ S + +++E G L+ YL S +N +L + + + + ++A +
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
YL+ +H DL N ++ ++ + DFG+ +
Sbjct: 138 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 21/153 (13%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVF------NLQCGRAFKSFAVECEMMKSIRHRNLIK 552
+G G +G+V A G G +VA+K L RA++ E ++K +RH N+I
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR----ELRLLKHMRHENVIG 88
Query: 553 VISSCSNEE----FKALVLEYKPHGS-LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
++ + +E F L G+ L K + D Q L + + L Y+H
Sbjct: 89 LLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFL--VYQMLKGLRYIH- 145
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 146 --AAGIIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 140/324 (43%), Gaps = 85/324 (26%)
Query: 53 IADV----RLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIP-------- 100
IAD+ L NL L L+ N + P + N + L+ LELS N+ S
Sbjct: 101 IADITPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQ 158
Query: 101 -----------NTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSL--TFIHLSD-N 146
NL LE L++ N ++ ++S L+ L+N +SL T +SD
Sbjct: 159 QLSFGNQVTDLKPLANLTTLERLDISSNKVS----DISVLAKLTNLESLIATNNQISDIT 214
Query: 147 PLDGILSKTSIGNLS---HSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIP 203
PL GIL T++ LS + LKD G +TNLT+ +DL N+++ P
Sbjct: 215 PL-GIL--TNLDELSLNGNQLKDI---------GTLASLTNLTD---LDLANNQISNLAP 259
Query: 204 ITLSXXXXXXXXXXXXNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRIL 263
+ LT+L EL+LG N++ P + L +L L
Sbjct: 260 --------------------------LSGLTKLTELKLGANQISNISP--LAGLTALTNL 291
Query: 264 SLSSNELTSI-PLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIP 322
L+ N+L I P++ NLK++ L N ++ P + +L L + F+ N S V
Sbjct: 292 ELNENQLEDISPIS--NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDV-- 345
Query: 323 TEIGGLKNLEYLFLGYNRLEGSIP 346
+ + L N+ +L G+N++ P
Sbjct: 346 SSLANLTNINWLSAGHNQISDLTP 369
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 44/221 (19%)
Query: 6 ISNLQNLEELDLRHNKLVG-TVPAAIFNMSMXXXXXXXXXXXXXXXSSIADVR----LPN 60
++NL LE LD+ NK+ +V A + N+ + I+D+ L N
Sbjct: 172 LANLTTLERLDISSNKVSDISVLAKLTNLE----------SLIATNNQISDITPLGILTN 221
Query: 61 LEALLLWGNNFS--GTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNY 118
L+ L L GN GT+ + L+ L+L+ N S P L L L L N
Sbjct: 222 LDELSLNGNQLKDIGTLASL----TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ 275
Query: 119 LTSSTP---------------ELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHS 163
+++ +P +L +S +SN K+LT++ L N + I +S+
Sbjct: 276 ISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL----TK 331
Query: 164 LKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPI 204
L+ + +N VS + NLTN + G N+++ P+
Sbjct: 332 LQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISDLTPL 370
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 27/130 (20%)
Query: 280 LKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIP----------------- 322
L ++ Q+NFS+N LT PL+ NL L+ I + N + + P
Sbjct: 66 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQI 123
Query: 323 TEIGGLKNLEYLFLGYNRLEGSIPDSFGDLIXXXXXXXXXXXXXGAIPTSLE---KLSYL 379
T+I LKNL L NRLE S ++ D+ G T L+ L+ L
Sbjct: 124 TDIDPLKNLTNL----NRLELS-SNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTL 178
Query: 380 EDLNLSFNKL 389
E L++S NK+
Sbjct: 179 ERLDISSNKV 188
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
IG G G V A + G VAVK +L+ + + E +M+ +H N++++ +S
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
+ +V+E+ G+L + ++ ++ Q + + V AL LH VIH D+
Sbjct: 88 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 142
Query: 619 KPDNVLLDDNLVAYLSDFG 637
K D++LL + LSDFG
Sbjct: 143 KSDSILLTHDGRVKLSDFG 161
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
IG G G V A + G VAVK +L+ + + E +M+ +H N++++ +S
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
+ +V+E+ G+L + ++ ++ Q + + V AL LH VIH D+
Sbjct: 142 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 196
Query: 619 KPDNVLLDDNLVAYLSDFG 637
K D++LL + LSDFG
Sbjct: 197 KSDSILLTHDGRVKLSDFG 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
IG G G V A + G VAVK +L+ + + E +M+ +H N++++ +S
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
+ +V+E+ G+L + ++ ++ Q + + V AL LH VIH D+
Sbjct: 92 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 146
Query: 619 KPDNVLLDDNLVAYLSDFG 637
K D++LL + LSDFG
Sbjct: 147 KSDSILLTHDGRVKLSDFG 165
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 140/323 (43%), Gaps = 82/323 (25%)
Query: 53 IADV----RLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRN 108
IAD+ L NL L L+ N + P + N + L+ LELS N+ S + L +
Sbjct: 97 IADITPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTS 152
Query: 109 LEWLNLRDNYLTSSTP------------------ELSFLSSLSNCKSL--TFIHLSD-NP 147
L+ L+ N +T P ++S L+ L+N +SL T +SD P
Sbjct: 153 LQQLSFSSNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP 212
Query: 148 LDGILSKTSIGNLS---HSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPI 204
L GIL T++ LS + LKD G +TNLT+ +DL N+++ P
Sbjct: 213 L-GIL--TNLDELSLNGNQLKDI---------GTLASLTNLTD---LDLANNQISNLAP- 256
Query: 205 TLSXXXXXXXXXXXXNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILS 264
+ LT+L EL+LG N++ P + L +L L
Sbjct: 257 -------------------------LSGLTKLTELKLGANQISNISP--LAGLTALTNLE 289
Query: 265 LSSNELTSI-PLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPT 323
L+ N+L I P++ NLK++ L N ++ P + +L L + F N S V +
Sbjct: 290 LNENQLEDISPIS--NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--S 343
Query: 324 EIGGLKNLEYLFLGYNRLEGSIP 346
+ L N+ +L G+N++ P
Sbjct: 344 SLANLTNINWLSAGHNQISDLTP 366
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 280 LKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYN 339
L ++ Q+NFS+N LT PL+ NL L+ I + N + + P + L NL L L N
Sbjct: 62 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 340 RLEGSIP 346
++ P
Sbjct: 118 QITDIDP 124
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRAFKSFAVECEMMKSIRHRNLIKVI 554
IG G FG V Y + + VA+K N + F E M+ H +++K+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
+ E +++E G L +L LD+ + +++AL YL +
Sbjct: 80 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---KRFV 135
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
H D+ NVL+ N L DFG+++ +
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYM 163
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
IG G G V A + G VAVK +L+ + + E +M+ +H N++++ +S
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
+ +V+E+ G+L + ++ ++ Q + + V AL LH VIH D+
Sbjct: 99 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 153
Query: 619 KPDNVLLDDNLVAYLSDFG 637
K D++LL + LSDFG
Sbjct: 154 KSDSILLTHDGRVKLSDFG 172
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 496 ENNLIGRGGFGSV----YKARLGDGMEVAVKVFNLQCGRAFK-SFAVECEMMKSIRHRNL 550
E+ +G G FG+V Y+ + + N A K E +M+ + + +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+++I C E + LV+E G L KYL + + D + ++ V+ ++YL
Sbjct: 89 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 143
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
+ +H DL NVLL A +SDFG++K L ++
Sbjct: 144 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 179
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 485 LELCRATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCGRAFKSFAVECEMMK 543
L++ F + ++G+G FG V+ A + A+K L+ VEC M++
Sbjct: 10 LQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVE 67
Query: 544 ------SIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMID 597
+ H L + + +E V+EY G L ++ S + D+ + +
Sbjct: 68 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAE 126
Query: 598 VASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+ L++LH +++ DLK DN+LLD + ++DFG+ K
Sbjct: 127 IILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK 166
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 19/157 (12%)
Query: 500 IGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY K + D E VA+K N R F E +MK ++++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALE 603
++ S + +++E G L+ YL S +N +L + + + + ++A +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
YL+ +H DL N ++ ++ + DFG+ +
Sbjct: 147 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 12/150 (8%)
Query: 498 NLIGRGGFGSVYKARLGDGMEV----AVKVFN---LQCGRAFKSFAVECEMMKSIRHRNL 550
++G+G FG V+ + G + A+KV L+ ++ +E +++ + H +
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVNHPFI 88
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+K+ + E L+L++ G L L S + + ++A AL++LH L
Sbjct: 89 VKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLH--SL 145
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+I+ DLKP+N+LLD+ L+DFG++K
Sbjct: 146 G-IIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
IG G G V A + G VAVK +L+ + + E +M+ +H N++++ +S
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
+ +V+E+ G+L + ++ ++ Q + + V AL LH VIH D+
Sbjct: 97 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 151
Query: 619 KPDNVLLDDNLVAYLSDFG 637
K D++LL + LSDFG
Sbjct: 152 KSDSILLTHDGRVKLSDFG 170
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 496 ENNLIGRGGFGSV----YKARLGDGMEVAVKVFNLQCGRAFK-SFAVECEMMKSIRHRNL 550
E+ +G G FG+V Y+ + + N A K E +M+ + + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+++I C E + LV+E G L KYL + + D + ++ V+ ++YL
Sbjct: 91 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 145
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
+ +H DL NVLL A +SDFG++K L ++
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 181
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 496 ENNLIGRGGFGSV----YKARLGDGMEVAVKVFNLQCGRAFK-SFAVECEMMKSIRHRNL 550
E+ +G G FG+V Y+ + + N A K E +M+ + + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+++I C E + LV+E G L KYL + + D + ++ V+ ++YL
Sbjct: 91 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 145
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
+ +H DL NVLL A +SDFG++K L ++
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 181
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 537 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI 596
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 67 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 124
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
V+ ++YL + +H DL NVLL A +SDFG++K L ++
Sbjct: 125 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRAFKSFAVECEMMKSIRHRNLIKVI 554
IG G FG V Y + + VA+K N + F E M+ H +++K+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
+ E +++E G L +L LD+ + +++AL YL +
Sbjct: 75 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---KRFV 130
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
H D+ NVL+ N L DFG+++ +
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYM 158
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 19/163 (11%)
Query: 500 IGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY K + D E VA+K N R F E +MK ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALE 603
++ S + +++E G L+ YL S +N +L + + + + ++A +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
YL+ +H DL N ++ ++ + DFG+ + + D
Sbjct: 153 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 500 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
IG G G V A + G VAVK +L+ + + E +M+ +H N++++ +S
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
+ +V+E+ G+L + ++ ++ Q + + V AL LH VIH D+
Sbjct: 219 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 273
Query: 619 KPDNVLLDDNLVAYLSDFG 637
K D++LL + LSDFG
Sbjct: 274 KSDSILLTHDGRVKLSDFG 292
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 537 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMI 596
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 57 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 114
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
V+ ++YL + +H DL NVLL A +SDFG++K L ++
Sbjct: 115 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 161
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 19/163 (11%)
Query: 500 IGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY K + D E VA+K N R F E +MK ++++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALE 603
++ S + +++E G L+ YL S +N +L + + + + ++A +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
YL+ +H DL N ++ ++ + DFG+ + + D
Sbjct: 140 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 179
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC------GRAFKSFAVECEMMKSIRHRNLIK 552
+G G F V K R G++ A K + G + + E ++K I+H N+I
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N+ L+LE G L +L + + + + + + + YLH +A
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIA- 135
Query: 613 VIHCDLKPDNVLLDDNLVA----YLSDFGIA 639
H DLKP+N++L D V + DFG+A
Sbjct: 136 --HFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 19/163 (11%)
Query: 500 IGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY K + D E VA+K N R F E +MK ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALE 603
++ S + +++E G L+ YL S +N +L + + + + ++A +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
YL+ +H DL N ++ ++ + DFG+ + + D
Sbjct: 153 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 57 RLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRD 116
RLP+L L L N +G P AS + L+L +N F L L+ LNL D
Sbjct: 52 RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYD 111
Query: 117 NYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLD 149
N ++ P S + SLT ++L+ NP +
Sbjct: 112 NQISCVMP-----GSFEHLNSLTSLNLASNPFN 139
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 232 RLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIP-LTFWNLKDILQLNFSS 290
RL L +LEL N+L G P F + ++ L L N++ I F L + LN
Sbjct: 52 RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYD 111
Query: 291 NFLTGPLPLEIGNLKVLIGIDFSMNNFS 318
N ++ +P +L L ++ + N F+
Sbjct: 112 NQISCVMPGSFEHLNSLTSLNLASNPFN 139
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 220 NKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSI-PLTFW 278
N+L G P++ + + EL+LG NK+ F L L+ L+L N+++ + P +F
Sbjct: 64 NQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFE 123
Query: 279 NLKDILQLNFSSN 291
+L + LN +SN
Sbjct: 124 HLNSLTSLNLASN 136
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC------GRAFKSFAVECEMMKSIRHRNLIK 552
+G G F V K R G++ A K + G + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N+ L+LE G L +L + + + + + + + YLH +A
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIA- 136
Query: 613 VIHCDLKPDNVLLDDNLVA----YLSDFGIA 639
H DLKP+N++L D V + DFG+A
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC------GRAFKSFAVECEMMKSIRHRNLIK 552
+G G F V K R G++ A K + G + + E ++K I+H N+I
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N+ L+LE G L +L + + + + + + + YLH +A
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIA- 136
Query: 613 VIHCDLKPDNVLLDDNLVA----YLSDFGIA 639
H DLKP+N++L D V + DFG+A
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC------GRAFKSFAVECEMMKSIRHRNLIK 552
+G G F V K R G++ A K + G + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N+ L+LE G L +L + + + + + + + YLH +A
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIA- 136
Query: 613 VIHCDLKPDNVLLDDNLVA----YLSDFGIA 639
H DLKP+N++L D V + DFG+A
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC------GRAFKSFAVECEMMKSIRHRNLIK 552
+G G F V K R G++ A K + G + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N+ L+LE G L +L + + + + + + + YLH +A
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIA- 136
Query: 613 VIHCDLKPDNVLLDDNLVA----YLSDFGIA 639
H DLKP+N++L D V + DFG+A
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC------GRAFKSFAVECEMMKSIRHRNLIK 552
+G G F V K R G++ A K + G + + E ++K I+H N+I
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N+ L+LE G L +L + + + + + + + YLH +A
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIA- 135
Query: 613 VIHCDLKPDNVLLDDNLVA----YLSDFGIA 639
H DLKP+N++L D V + DFG+A
Sbjct: 136 --HFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 19/163 (11%)
Query: 500 IGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY K + D E VA+K N R F E +MK ++++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALE 603
++ S + +++E G L+ YL S +N +L + + + + ++A +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
YL+ +H DL N ++ ++ + DFG+ + + D
Sbjct: 146 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 12/150 (8%)
Query: 498 NLIGRGGFGSVYKARLGDGMEV----AVKVFN---LQCGRAFKSFAVECEMMKSIRHRNL 550
++G+G FG V+ + G + A+KV L+ ++ +E +++ + H +
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVNHPFI 89
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+K+ + E L+L++ G L L S + + ++A AL++LH L
Sbjct: 90 VKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLH--SL 146
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+I+ DLKP+N+LLD+ L+DFG++K
Sbjct: 147 G-IIYRDLKPENILLDEEGHIKLTDFGLSK 175
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCGRAFKSF-AVECEMMKSIRHRNLI 551
F++ IG+G FG V+K +V A+K+ +L+ E ++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
K S + +++EY GS L LD Q I+ ++ L+YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHS---E 123
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
IH D+K NVLL ++ L+DFG+A
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCGRAFKSF-AVECEMMKSIRHRNLI 551
F++ IG+G FG V+K +V A+K+ +L+ E ++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
K S + +++EY GS L LD Q I+ ++ L+YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHS---E 123
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
IH D+K NVLL ++ L+DFG+A
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC------GRAFKSFAVECEMMKSIRHRNLIK 552
+G G F V K R G++ A K + G + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N+ L+LE G L +L + + + + + + + YLH +A
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIA- 136
Query: 613 VIHCDLKPDNVLLDDNLVA----YLSDFGIA 639
H DLKP+N++L D V + DFG+A
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 19/163 (11%)
Query: 500 IGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY K + D E VA+K N R F E +MK ++++
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALE 603
++ S + +++E G L+ YL S +N +L + + + + ++A +
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
YL+ +H DL N ++ ++ + DFG+ + + D
Sbjct: 144 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 183
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC------GRAFKSFAVECEMMKSIRHRNLIK 552
+G G F V K R G++ A K + G + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N+ L+LE G L +L + + + + + + + YLH +A
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIA- 136
Query: 613 VIHCDLKPDNVLLDDNLVA----YLSDFGIA 639
H DLKP+N++L D V + DFG+A
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 12/150 (8%)
Query: 498 NLIGRGGFGSVYKARLGDGMEV----AVKVFN---LQCGRAFKSFAVECEMMKSIRHRNL 550
++G+G FG V+ + G + A+KV L+ ++ +E +++ + H +
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVNHPFI 88
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+K+ + E L+L++ G L L S + + ++A AL++LH L
Sbjct: 89 VKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLH--SL 145
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+I+ DLKP+N+LLD+ L+DFG++K
Sbjct: 146 G-IIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 500 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKV----- 553
+G GG G V+ A D VA+K L ++ K E ++++ + H N++KV
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 554 ---------ISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
+ S + +V EY L L +L+ RL M + L+Y
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVL-EQGPLLEEHARL-FMYQLLRGLKY 135
Query: 605 LHFGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLL 642
+H A V+H DLKP N+ ++ ++LV + DFG+A+++
Sbjct: 136 IHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 489 RATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRAFKSFAVECEMMKS 544
R + +G+GGF Y+ D EV A KV L + + E + KS
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
+ + +++ +++F +VLE SL + + + R M ++Y
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQY 141
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
LH VIH DLK N+ L+D++ + DFG+A
Sbjct: 142 LHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 173
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 143
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + FG+A+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILGFGLAR 173
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCGRAFKSF-AVECEMMKSIRHRNLI 551
F++ IG+G FG V+K +V A+K+ +L+ E ++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
K S + +++EY GS L LD Q I+ ++ L+YLH
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHS---E 138
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
IH D+K NVLL ++ L+DFG+A
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC------GRAFKSFAVECEMMKSIRHRNLIK 552
+G G F V K R G++ A K + G + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N+ L+LE G L +L + + + + + + + YLH +A
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIA- 136
Query: 613 VIHCDLKPDNVLLDDNLVA----YLSDFGIA 639
H DLKP+N++L D V + DFG+A
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 29/155 (18%)
Query: 498 NLIGRGGFGSVYKARLGDGMEV-AVKVFN---------LQCGRAFKSFAV--ECEMMKSI 545
+IGRG FG V ++ + + A+K+ N C R + V +C+ + ++
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 155
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYS-SNCILDIFQRLNI--MIDVASAL 602
+ + +E LV++Y G L L + + + R I M+ ++
Sbjct: 156 HY--------AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 207
Query: 603 EYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
LH+ +H D+KPDNVLLD N L+DFG
Sbjct: 208 HQLHY------VHRDIKPDNVLLDVNGHIRLADFG 236
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 19/163 (11%)
Query: 500 IGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY K + D E VA+K N R F E +MK ++++
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALE 603
++ S + +++E G L+ YL S +N +L + + + + ++A +
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
YL+ +H DL N ++ ++ + DFG+ + + D
Sbjct: 175 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 214
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 29/155 (18%)
Query: 498 NLIGRGGFGSVYKARLGDGMEV-AVKVFN---------LQCGRAFKSFAV--ECEMMKSI 545
+IGRG FG V ++ + + A+K+ N C R + V +C+ + ++
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 139
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYS-SNCILDIFQRLNI--MIDVASAL 602
+ + +E LV++Y G L L + + + R I M+ ++
Sbjct: 140 HY--------AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 191
Query: 603 EYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637
LH+ +H D+KPDNVLLD N L+DFG
Sbjct: 192 HQLHY------VHRDIKPDNVLLDVNGHIRLADFG 220
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 19/163 (11%)
Query: 500 IGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY K + D E VA+K N R F E +MK ++++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALE 603
++ S + +++E G L+ YL S +N +L + + + + ++A +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
YL+ +H DL N ++ ++ + DFG+ + + D
Sbjct: 147 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 186
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
+ F +G G FG V + + G A+K+ + Q K E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
L+K+ S + +V+EY G + +L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644
+I+ DLKP+N+++D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG 193
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 19/163 (11%)
Query: 500 IGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY K + D E VA+K N R F E +MK ++++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALE 603
++ S + +++E G L+ YL S +N +L + + + + ++A +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
YL+ +H DL N ++ ++ + DFG+ + + D
Sbjct: 146 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 489 RATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRAFKSFAVECEMMKS 544
R + +G+GGF Y+ D EV A KV L + + E + KS
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
+ + +++ +++F +VLE SL + + + R M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQY 157
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
LH VIH DLK N+ L+D++ + DFG+A
Sbjct: 158 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 25/140 (17%)
Query: 499 LIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAV--ECEMMKSIRHRNLIKVIS 555
++G+G FG V K + E AVKV N + + + E E++K + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 556 SCSNEEFKALVLEYKPHGSLEKYLYSSNCILD-IFQR--------LNIMIDVASALEYLH 606
+ +V E LY+ + D I +R I+ V S + Y+H
Sbjct: 89 ILEDSSSFYIVGE----------LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 607 FGCLAPVIHCDLKPDNVLLD 626
++H DLKP+N+LL+
Sbjct: 139 ---KHNIVHRDLKPENILLE 155
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 25/140 (17%)
Query: 499 LIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAV--ECEMMKSIRHRNLIKVIS 555
++G+G FG V K + E AVKV N + + + E E++K + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 556 SCSNEEFKALVLEYKPHGSLEKYLYSSNCILD-IFQR--------LNIMIDVASALEYLH 606
+ +V E LY+ + D I +R I+ V S + Y+H
Sbjct: 89 ILEDSSSFYIVGE----------LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 607 FGCLAPVIHCDLKPDNVLLD 626
++H DLKP+N+LL+
Sbjct: 139 ---KHNIVHRDLKPENILLE 155
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 143
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + D G+A+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDAGLAR 173
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 19/163 (11%)
Query: 500 IGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY K + D E VA+K N R F E +MK ++++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALE 603
++ S + +++E G L+ YL S +N +L + + + + ++A +
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
YL+ +H DL N ++ ++ + DFG+ + + D
Sbjct: 143 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 182
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC------GRAFKSFAVECEMMKSIRHRNLIK 552
+G G F V K R G++ A K + G + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N+ L+LE G L +L + + + + + + + YLH +A
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIA- 136
Query: 613 VIHCDLKPDNVLLDDNLVA----YLSDFGIA 639
H DLKP+N++L D V + DFG+A
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 489 RATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRAFKSFAVECEMMKS 544
R + +G+GGF Y+ D EV A KV L + + E + KS
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
+ + +++ +++F +VLE SL + + + R M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQY 157
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
LH VIH DLK N+ L+D++ + DFG+A
Sbjct: 158 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC------GRAFKSFAVECEMMKSIRHRNLIK 552
+G G F V K R G++ A K + G + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N+ L+LE G L +L + + + + + + + YLH +A
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIA- 136
Query: 613 VIHCDLKPDNVLLDDNLVA----YLSDFGIA 639
H DLKP+N++L D V + DFG+A
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 489 RATNGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRAFKSFAVECEMMKS 544
R + +G+GGF Y+ D EV A KV L + + E + KS
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 604
+ + +++ +++F +VLE SL + + + R M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQY 157
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
LH VIH DLK N+ L+D++ + DFG+A
Sbjct: 158 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 143
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + D G+A+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDRGLAR 173
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC------GRAFKSFAVECEMMKSIRHRNLIK 552
+G G F V K R G++ A K + G + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N+ L+LE G L +L + + + + + + + YLH +A
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIA- 136
Query: 613 VIHCDLKPDNVLLDDNLVA----YLSDFGIA 639
H DLKP+N++L D V + DFG+A
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC------GRAFKSFAVECEMMKSIRHRNLIK 552
+G G F V K R G++ A K + G + + E ++K I+H N+I
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N+ L+LE G L +L + + + + + + + YLH +A
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIA- 136
Query: 613 VIHCDLKPDNVLLDDNLVA----YLSDFGIA 639
H DLKP+N++L D V + DFG+A
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 498 NLIGRGGFGSVYKARL----GDGMEVAVKVFN---LQCGRAFKSFAVECEMMKSIRHRNL 550
++G+G FG V+ R G A+KV L+ ++ +E +++ + H +
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT-KMERDILADVNHPFV 92
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+K+ + E L+L++ G L L S + + ++A L++LH L
Sbjct: 93 VKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALGLDHLH--SL 149
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
+I+ DLKP+N+LLD+ L+DFG++K I +
Sbjct: 150 G-IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHE 184
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 9/148 (6%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRAFKSFAVECEMMKSIRHRNLIKVI 554
IG G FG V Y + M VA+K N + F E M+ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
+ E +++E G L +L LD+ + +++AL YL +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES---KRFV 133
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
H D+ NVL+ L DFG+++ +
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYM 161
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 9/148 (6%)
Query: 500 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRAFKSFAVECEMMKSIRHRNLIKVI 554
IG G FG V Y + M VA+K N + F E M+ H +++K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
+ E +++E G L +L LD+ + +++AL YL +
Sbjct: 458 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF---V 513
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
H D+ NVL+ L DFG+++ +
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSRYM 541
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 143
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + D G+A+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDGGLAR 173
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 25/174 (14%)
Query: 494 FSENNL-----IGRGGFGSVYKAR-LGDGME-----VAVKVFNLQCGRAFK-SFAVECEM 541
F NNL +G G FG V +A G G E VAVK+ K + E ++
Sbjct: 35 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 542 MKSI-RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---------LDIFQR 591
M + +H N++ ++ +C++ ++ EY +G L +L L++
Sbjct: 95 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 592 LNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
L+ VA + +L IH D+ NVLL + VA + DFG+A+ ++ +
Sbjct: 155 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 205
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 63/146 (43%), Gaps = 6/146 (4%)
Query: 500 IGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G FG V++ G K N + E +M + H LI + +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
++ L+LE+ G L + + + + + +N M L+++H ++H D+
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDI 175
Query: 619 KPDNVLLDDNLVAYLS--DFGIAKLL 642
KP+N++ + + + DFG+A L
Sbjct: 176 KPENIMCETKKASSVKIIDFGLATKL 201
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 139/324 (42%), Gaps = 85/324 (26%)
Query: 53 IADV----RLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIP-------- 100
IAD+ L NL L L+ N + P + N + L+ LELS N+ S
Sbjct: 97 IADITPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQ 154
Query: 101 -----------NTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSL--TFIHLSD-N 146
NL LE L++ N ++ ++S L+ L+N +SL T +SD
Sbjct: 155 QLNFGNQVTDLKPLANLTTLERLDISSNKVS----DISVLAKLTNLESLIATNNQISDIT 210
Query: 147 PLDGILSKTSIGNLS---HSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIP 203
PL GIL T++ LS + LKD G +TNLT+ +DL N+++ P
Sbjct: 211 PL-GIL--TNLDELSLNGNQLKDI---------GTLASLTNLTD---LDLANNQISNLAP 255
Query: 204 ITLSXXXXXXXXXXXXNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRIL 263
+ LT+L EL+LG N++ P + L +L L
Sbjct: 256 --------------------------LSGLTKLTELKLGANQISNISP--LAGLTALTNL 287
Query: 264 SLSSNELTSI-PLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIP 322
L+ N+L I P++ NLK++ L N ++ P + +L L + F N S V
Sbjct: 288 ELNENQLEDISPIS--NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-- 341
Query: 323 TEIGGLKNLEYLFLGYNRLEGSIP 346
+ + L N+ +L G+N++ P
Sbjct: 342 SSLANLTNINWLSAGHNQISDLTP 365
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 27/130 (20%)
Query: 280 LKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIP----------------- 322
L ++ Q+NFS+N LT PL+ NL L+ I + N + + P
Sbjct: 62 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQI 119
Query: 323 TEIGGLKNLEYLFLGYNRLEGSIPDSFGDLIXXXXXXXXXXXXXGAIPTSLE---KLSYL 379
T+I LKNL L NRLE S ++ D+ G T L+ L+ L
Sbjct: 120 TDIDPLKNLTNL----NRLELS-SNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTTL 174
Query: 380 EDLNLSFNKL 389
E L++S NK+
Sbjct: 175 ERLDISSNKV 184
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 44/221 (19%)
Query: 6 ISNLQNLEELDLRHNKLVG-TVPAAIFNMSMXXXXXXXXXXXXXXXSSIADVR----LPN 60
++NL LE LD+ NK+ +V A + N+ + I+D+ L N
Sbjct: 168 LANLTTLERLDISSNKVSDISVLAKLTNLE----------SLIATNNQISDITPLGILTN 217
Query: 61 LEALLLWGNNFS--GTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNY 118
L+ L L GN GT+ + L+ L+L+ N S P L L L L N
Sbjct: 218 LDELSLNGNQLKDIGTLASL----TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ 271
Query: 119 LTSSTP---------------ELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHS 163
+++ +P +L +S +SN K+LT++ L N + I +S+
Sbjct: 272 ISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL----TK 327
Query: 164 LKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPI 204
L+ + N VS + NLTN + G N+++ P+
Sbjct: 328 LQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQISDLTPL 366
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 139/324 (42%), Gaps = 85/324 (26%)
Query: 53 IADV----RLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIP-------- 100
IAD+ L NL L L+ N + P + N + L+ LELS N+ S
Sbjct: 102 IADITPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQ 159
Query: 101 -----------NTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSL--TFIHLSD-N 146
NL LE L++ N ++ ++S L+ L+N +SL T +SD
Sbjct: 160 QLSFGNQVTDLKPLANLTTLERLDISSNKVS----DISVLAKLTNLESLIATNNQISDIT 215
Query: 147 PLDGILSKTSIGNLS---HSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIP 203
PL GIL T++ LS + LKD G +TNLT+ +DL N+++ P
Sbjct: 216 PL-GIL--TNLDELSLNGNQLKDI---------GTLASLTNLTD---LDLANNQISNLAP 260
Query: 204 ITLSXXXXXXXXXXXXNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRIL 263
+ LT+L EL+LG N++ P + L +L L
Sbjct: 261 --------------------------LSGLTKLTELKLGANQISNISP--LAGLTALTNL 292
Query: 264 SLSSNELTSI-PLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIP 322
L+ N+L I P++ NLK++ L N ++ P + +L L + F N S V
Sbjct: 293 ELNENQLEDISPIS--NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-- 346
Query: 323 TEIGGLKNLEYLFLGYNRLEGSIP 346
+ + L N+ +L G+N++ P
Sbjct: 347 SSLANLTNINWLSAGHNQISDLTP 370
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 27/130 (20%)
Query: 280 LKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIP----------------- 322
L ++ Q+NFS+N LT PL+ NL L+ I + N + + P
Sbjct: 67 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQI 124
Query: 323 TEIGGLKNLEYLFLGYNRLEGSIPDSFGDLIXXXXXXXXXXXXXGAIPTSLE---KLSYL 379
T+I LKNL L NRLE S ++ D+ G T L+ L+ L
Sbjct: 125 TDIDPLKNLTNL----NRLELS-SNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTL 179
Query: 380 EDLNLSFNKL 389
E L++S NK+
Sbjct: 180 ERLDISSNKV 189
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 44/221 (19%)
Query: 6 ISNLQNLEELDLRHNKLVG-TVPAAIFNMSMXXXXXXXXXXXXXXXSSIADVR----LPN 60
++NL LE LD+ NK+ +V A + N+ + I+D+ L N
Sbjct: 173 LANLTTLERLDISSNKVSDISVLAKLTNLE----------SLIATNNQISDITPLGILTN 222
Query: 61 LEALLLWGNNFS--GTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNY 118
L+ L L GN GT+ + L+ L+L+ N S P L L L L N
Sbjct: 223 LDELSLNGNQLKDIGTLASL----TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ 276
Query: 119 LTSSTP---------------ELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHS 163
+++ +P +L +S +SN K+LT++ L N + I +S+
Sbjct: 277 ISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL----TK 332
Query: 164 LKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPI 204
L+ + N VS + NLTN + G N+++ P+
Sbjct: 333 LQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQISDLTPL 371
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ RH N+I
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 106
Query: 552 -KVISSCSNEEFKALVLEYKPHGS-LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + L G+ L K L + + D + + L+Y+H
Sbjct: 107 NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 162
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 163 -ANVLHRDLKPSNLLLNTTXDLKICDFGLARV 193
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 8/153 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
N F + ++G+GGFG V ++ G A K + + K A+ E ++++ +
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYS-SNCILDIFQRLNIMIDVASALEYLH 606
R ++ + + ++ LVL G L+ ++Y + + ++ LE LH
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 607 FGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
+++ DLKP+N+LLDD+ +SD G+A
Sbjct: 304 ---RERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 17/165 (10%)
Query: 488 CRATNGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFN------LQCGRAFKSFAVECE 540
+ + + +LIGRG +G VY A + + VA+K N + C R + E
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILR----EIT 79
Query: 541 MMKSIRHRNLIKVISSCSNEE---FKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMID 597
++ ++ +I++ E+ F L + + S K L+ + L I+ +
Sbjct: 80 ILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYN 139
Query: 598 VASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+ +++H + +IH DLKP N LL+ + + DFG+A+ +
Sbjct: 140 LLLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTI 181
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 70/188 (37%), Gaps = 50/188 (26%)
Query: 500 IGRGGFGSVYKARLGDGMEV-AVKVFNLQCGRAF-----KSFAVECEMMKSIRHRNLIKV 553
IG+G +G V A + A+K+ N R + E +MK + H N+ ++
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 554 ISSCSNEEFKALVLEYKPHGSLEKYL------YSSNCILDIFQRL--------------- 592
+E++ LV+E G L L + C +D+ +
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 593 ------------------NIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDN--LVAY 632
NIM + SAL YLH + H D+KP+N L N
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICHRDIKPENFLFSTNKSFEIK 210
Query: 633 LSDFGIAK 640
L DFG++K
Sbjct: 211 LVDFGLSK 218
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 25/174 (14%)
Query: 494 FSENNL-----IGRGGFGSVYKAR-LGDGME-----VAVKVFNLQCGRAFK-SFAVECEM 541
F NNL +G G FG V +A G G E VAVK+ K + E ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 542 MKSI-RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI---------LDIFQR 591
M + +H N++ ++ +C++ ++ EY +G L +L L++
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 162
Query: 592 LNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
L+ VA + +L IH D+ NVLL + VA + DFG+A+ ++ +
Sbjct: 163 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 213
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 75/188 (39%), Gaps = 34/188 (18%)
Query: 488 CRATNGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN--------------------- 525
C N ++ + IG+G +G V A D A+KV +
Sbjct: 9 CVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRP 68
Query: 526 -----LQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS--NEEFKALVLEYKPHGSLEKY 578
+Q + E ++K + H N++K++ NE+ +V E G + +
Sbjct: 69 APGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV 128
Query: 579 LYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGI 638
D Q D+ +EYLH+ +IH D+KP N+L+ ++ ++DFG+
Sbjct: 129 PTLKPLSED--QARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGV 183
Query: 639 AKLLIGED 646
+ G D
Sbjct: 184 SNEFKGSD 191
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 8/153 (5%)
Query: 492 NGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSIRH 547
N F + ++G+GGFG V ++ G A K + + K A+ E ++++ +
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYS-SNCILDIFQRLNIMIDVASALEYLH 606
R ++ + + ++ LVL G L+ ++Y + + ++ LE LH
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 607 FGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
+++ DLKP+N+LLDD+ +SD G+A
Sbjct: 304 ---RERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 19/163 (11%)
Query: 500 IGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIK 552
+G+G FG VY K + D E VA+K N R F E +MK ++++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALE 603
++ S + +++E G L+ YL S +N +L + + + + ++A +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGED 646
YL+ +H DL N + ++ + DFG+ + + D
Sbjct: 140 YLNANKF---VHRDLAARNCXVAEDFTVKIGDFGMTRDIYETD 179
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 498 NLIGRGGFGSVYKARLGD-GMEVAVKVFN----LQCGRAFKSFAVECEMMKSIRHRNLIK 552
+IGRG F V ++ G A+K+ N L+ G F E +++ + R + +
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEV-SCFREERDVLVNGDRRWITQ 125
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ + +E + LV+EY G L L + + ++ A++ +H
Sbjct: 126 LHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLG 182
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFG 637
+H D+KPDN+LLD L+DFG
Sbjct: 183 YVHRDIKPDNILLDRCGHIRLADFG 207
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKSFA------VECEMMKSIRHRNLIK 552
+G G +GSV A G VAVK + R F+S E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 553 VIS----SCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 608
++ + S EEF + L G+ + + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS- 143
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+ ++++ + DF +A+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFYLAR 173
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 33/169 (19%)
Query: 491 TNGFSENNLIGRGGFGSVYKA-RLGDGMEVAVK--------VFNLQCGRAFKSFAVECEM 541
++ F +L+G G +G V A G VA+K +F L+ R E ++
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-------EIKI 62
Query: 542 MKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 601
+K +H N+I + + + F+ E Y+ D+ + ++ +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFN---------EVYIIQELMQTDLHRVISTQMLSDDH 113
Query: 602 LEYLHFGCLAPV--------IHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
++Y + L V IH DLKP N+L++ N + DFG+A+++
Sbjct: 114 IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 21/159 (13%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRH 547
+++ IG G +G V A VA+K F Q C R + E +++ RH
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR----EIQILLRFRH 100
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLN-----IMIDVASAL 602
N+I + +A+ Y +E LY +L Q N + + L
Sbjct: 101 ENVIGIRDILRASTLEAMRDVYIVQDLMETDLYK---LLKSQQLSNDHICYFLYQILRGL 157
Query: 603 EYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
+Y+H A V+H DLKP N+L++ + DFG+A++
Sbjct: 158 KYIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLARI 193
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 33/169 (19%)
Query: 491 TNGFSENNLIGRGGFGSVYKA-RLGDGMEVAVK--------VFNLQCGRAFKSFAVECEM 541
++ F +L+G G +G V A G VA+K +F L+ R E ++
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-------EIKI 62
Query: 542 MKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 601
+K +H N+I + + + F+ E Y+ D+ + ++ +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFN---------EVYIIQELMQTDLHRVISTQMLSDDH 113
Query: 602 LEYLHFGCLAPV--------IHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
++Y + L V IH DLKP N+L++ N + DFG+A+++
Sbjct: 114 IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 33/169 (19%)
Query: 491 TNGFSENNLIGRGGFGSVYKA-RLGDGMEVAVK--------VFNLQCGRAFKSFAVECEM 541
++ F +L+G G +G V A G VA+K +F L+ R E ++
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-------EIKI 62
Query: 542 MKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 601
+K +H N+I + + + F+ E Y+ D+ + ++ +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFN---------EVYIIQELMQTDLHRVISTQMLSDDH 113
Query: 602 LEYLHFGCLAPV--------IHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
++Y + L V IH DLKP N+L++ N + DFG+A+++
Sbjct: 114 IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 174 VSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSIPDSIC-R 232
+S G+ +++T L T+ L N+L S+P+ + S+P + R
Sbjct: 74 LSAGVFDDLTELG---TLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDR 129
Query: 233 LTELYELELGGNKLFGSIPA-CFSNLASLRILSLSSNELTSIP 274
LT+L EL L N+L SIPA F L +L+ LSLS+N+L S+P
Sbjct: 130 LTKLKELRLNTNQL-QSIPAGAFDKLTNLQTLSLSTNQLQSVP 171
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 224 GSIPDSICR-LTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPL-TFWNLK 281
++ D+ R LT+L L L N+L F +L L L L++N+L S+PL F +L
Sbjct: 48 ATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLT 107
Query: 282 DILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRL 341
+ +L N L L L + + N S+ L NL+ L L N+L
Sbjct: 108 QLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167
Query: 342 EGSIP 346
+ S+P
Sbjct: 168 Q-SVP 171
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 174 VSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSIPDSIC-R 232
+S G+ +++T L T+ L N+L S+P+ + S+P + R
Sbjct: 74 LSAGVFDDLTELG---TLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDR 129
Query: 233 LTELYELELGGNKLFGSIPA-CFSNLASLRILSLSSNELTSIP 274
LT+L EL L N+L SIPA F L +L+ LSLS+N+L S+P
Sbjct: 130 LTKLKELRLNTNQL-QSIPAGAFDKLTNLQTLSLSTNQLQSVP 171
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 224 GSIPDSICR-LTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPL-TFWNLK 281
++ D+ R LT+L L L N+L F +L L L L++N+L S+PL F +L
Sbjct: 48 ATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLT 107
Query: 282 DILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRL 341
+ +L N L L L + + N S+ L NL+ L L N+L
Sbjct: 108 QLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167
Query: 342 EGSIP 346
+ S+P
Sbjct: 168 Q-SVP 171
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 23/161 (14%)
Query: 500 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSIRHR-NLI 551
+GRG FG V +A + VAVK+ + ++ E +++ I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 552 KVISSCSNEEFKALVL-EYKPHGSLEKYLYSS-----------NCILDIFQRLNIMIDVA 599
++ +C+ +V+ E+ G+L YL S L + + VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 600 SALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+E+L IH DL N+LL + V + DFG+A+
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 25/163 (15%)
Query: 500 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSIRHR-NLI 551
+GRG FG V +A + VAVK+ + ++ E +++ I H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 552 KVISSCSNEEFKALVL-EYKPHGSLEKYL---------YSSNCILDIFQRLNIMI----D 597
++ +C+ +V+ E+ G+L YL Y + F L +I
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 598 VASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +E+L IH DL N+LL + V + DFG+A+
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ RH N+I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 142
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 143 -ANVLHRDLKPSNLLLNTTXDLKIXDFGLARV 173
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 39/184 (21%)
Query: 494 FSENNL-----IGRGGFGSVYKAR-LGDGME-----VAVKVFNLQCGRAFK-SFAVECEM 541
F NNL +G G FG V +A G G E VAVK+ K + E ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 542 MKSI-RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYL---------YSSNCILDIFQR 591
M + +H N++ ++ +C++ ++ EY +G L +L YS N + ++
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 592 LNIMIDVASALEYLHFGCLAP----------VIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
L S+ + LHF IH D+ NVLL + VA + DFG+A+
Sbjct: 163 L-------SSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 215
Query: 642 LIGE 645
++ +
Sbjct: 216 IMND 219
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 34/159 (21%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRAFKSFAVECEMMKSIRHRNLIKV 553
+G G +G V A R+ + VAVK+ +++ C K E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVKF 69
Query: 554 ISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLA 611
+ L LEY G L F R+ +I + A + H +A
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMA 115
Query: 612 PVI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ + RH N+I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLAFRHENIIGI 88
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 144
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 145 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARV 175
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 34/159 (21%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRAFKSFAVECEMMKSIRHRNLIKV 553
+G G +G V A R+ + VAVK+ +++ C K E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVKF 70
Query: 554 ISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLA 611
+ L LEY G L F R+ +I + A + H +A
Sbjct: 71 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMA 116
Query: 612 PVI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQCGRAF---KSFAVECEMMKSIRHRNLIKVI 554
+G G +G V A R+ + VAVK+ +++ RA ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK--RAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLAP 612
+ L LEY G L F R+ +I + A + H +A
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMAG 116
Query: 613 VI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 494 FSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK 552
F + +GRG VY+ + G A+KV + K E ++ + H N+IK
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIK 112
Query: 553 VISSCSNEEFKALVLEYKPHGSL-----EKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
+ +LVLE G L EK YS D ++ + A+ YLH
Sbjct: 113 LKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ------ILEAVAYLHE 166
Query: 608 GCLAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAKLL 642
++H DLKP+N+L + ++DFG++K++
Sbjct: 167 NG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 498 NLIGRGGFGSVYKARLGDGME-VAVKVFN------LQCGRAFKSFAVECEMMKSIRHRNL 550
+LIGRG +G VY A + + VA+K N + C R + + +KS L
Sbjct: 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITI-LNRLKSDYIIRL 90
Query: 551 IKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
+I +F L + + S K L+ + L I+ ++ ++H
Sbjct: 91 YDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH---E 147
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+ +IH DLKP N LL+ + + DFG+A+ + E
Sbjct: 148 SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ RH N+I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 142
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 143 -ANVLHRDLKPSNLLLNTTXDLKICDFGLARV 173
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ RH N+I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 146
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 147 -ANVLHRDLKPSNLLLNTTXDLKICDFGLARV 177
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ RH N+I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 142
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 143 -ANVLHRDLKPSNLLLNTTXDLKICDFGLARV 173
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 88 LELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNP 147
L L +NS +TF +LR+LE L L N + + + + SL + L DN
Sbjct: 40 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIE-----VGAFNGLPSLNTLELFDNR 94
Query: 148 LDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSIT-IDLGGNKLNGSIPITL 206
L + T L++ ++ N N IP N S+ +DLG K I
Sbjct: 95 LTTV--PTQAFEYLSKLRELWLRN-NPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAA 151
Query: 207 SXXXXXXXXXXXXNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLS 266
IP+ + L L ELEL GN+L P F L SLR L L
Sbjct: 152 FEGLVNLRYLNLGMCNLKDIPN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLM 210
Query: 267 SNELTSIPL-TFWNLKDILQLNFSSNFL 293
++ +I F +LK + +LN S N L
Sbjct: 211 HAQVATIERNAFDDLKSLEELNLSHNNL 238
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 64/171 (37%), Gaps = 28/171 (16%)
Query: 233 LTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNF 292
L L LEL N+L F L+ LR L L +N + SIP +++ N
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIP------------SYAFNR 129
Query: 293 LTGPLPLEIGNLKVLIGI--------------DFSMNNFSSVIPTEIGGLKNLEYLFLGY 338
+ L++G LK L I + M N + + L LE L L
Sbjct: 130 VPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDI--PNLTALVRLEELELSG 187
Query: 339 NRLEGSIPDSFGDLIXXXXXXXXXXXXXGAIPTSLEKLSYLEDLNLSFNKL 389
NRL+ P SF L + + L LE+LNLS N L
Sbjct: 188 NRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ + RH N+I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLAFRHENIIGI 88
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 144
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 145 -ANVLHRDLKPSNLLLNTTSDLKICDFGLARV 175
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 11/146 (7%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G GGF V L DG A+K + + E +M + H N++++++ C
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 559 NEEFKA----LVLEYKPHGSLE---KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
E L+L + G+L + L L Q L +++ + LE +H A
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYA 156
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFG 637
H DLKP N+LL D L D G
Sbjct: 157 ---HRDLKPTNILLGDEGQPVLMDLG 179
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ RH N+I
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 84
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 85 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 140
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 141 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARV 171
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ RH N+I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 146
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 147 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ RH N+I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 88
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 144
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 145 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARV 175
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ RH N+I
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 91
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 92 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 147
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 148 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARV 178
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ RH N+I
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 91
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 92 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 147
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 148 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARV 178
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ RH N+I
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 92
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 93 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 148
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 149 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARV 179
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ RH N+I
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 83
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 84 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 139
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 140 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARV 170
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ RH N+I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 146
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 147 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQCGRAF---KSFAVECEMMKSIRHRNLIKVI 554
+G G +G V A R+ + VAVK+ +++ RA ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLAP 612
+ L LEY G L F R+ +I + A + H +A
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMAG 117
Query: 613 VI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ RH N+I
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 94
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 95 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 150
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 151 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARV 181
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ RH N+I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 142
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 143 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARV 173
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQCGRAF---KSFAVECEMMKSIRHRNLIKVI 554
+G G +G V A R+ + VAVK+ +++ RA ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLAP 612
+ L LEY G L F R+ +I + A + H +A
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMAG 116
Query: 613 VI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ RH N+I
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 84
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 85 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 140
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 141 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARV 171
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ RH N+I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 142
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 143 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARV 173
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 34/169 (20%)
Query: 498 NLIGRGGFGSVYKA-RLGDGMEVAVKV-----FNLQCGRAFKSFAVECEMMKSIRHRNLI 551
+IG+G F V + G + AVK+ F G + + E + ++H +++
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLN------------IMIDVA 599
+++ + S++ +V E+ + ++ +I +R + M +
Sbjct: 90 ELLETYSSDGMLYMVFEF---------MDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 600 SALEYLHFGCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLLIGE 645
AL Y H +IH D+KP+NVLL +++ L DFG+A + +GE
Sbjct: 141 EALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGE 185
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ RH N+I
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 106
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 107 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 162
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 163 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARV 193
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 15/151 (9%)
Query: 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC------GRAFKSFAVECEMMKSIRHRNLIK 552
+G G F V K R G++ A K + G + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ N+ L+ E G L +L + + + + + + + YLH +A
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIA- 136
Query: 613 VIHCDLKPDNVLLDDNLVA----YLSDFGIA 639
H DLKP+N++L D V + DFG+A
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 499 LIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRAFKSFAVECEMMKSIRHRNLIKVI 554
+G+GGF ++ D EV A K+ L + ++E + +S+ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
+ +F +VLE SL + + + R + + +YLH VI
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQYLHRN---RVI 139
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIA 639
H DLK N+ L+++L + DFG+A
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 499 LIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRAFKSFAVECEMMKSIRHRNLIKVI 554
+G+GGF ++ D EV A K+ L + ++E + +S+ H++++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
+ +F +VLE SL + + + R + + +YLH VI
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQYLHRNR---VI 163
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIA 639
H DLK N+ L+++L + DFG+A
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLA 188
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 499 LIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRAFKSFAVECEMMKSIRHRNLIKVI 554
+G+GGF ++ D EV A K+ L + ++E + +S+ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
+ +F +VLE SL + + + R + + +YLH VI
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQYLHRN---RVI 139
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIA 639
H DLK N+ L+++L + DFG+A
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 23/161 (14%)
Query: 500 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSIRHR-NLI 551
+GRG FG V +A + VAVK+ + ++ E +++ I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 552 KVISSCSNEEFKALVL-EYKPHGSLEKYLYSS-------NCILDIFQRLNIMI----DVA 599
++ +C+ +V+ E+ G+L YL S + F L +I VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 600 SALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+E+L IH DL N+LL + V + DFG+A+
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 499 LIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRAFKSFAVECEMMKSIRHRNLIKVI 554
+G+GGF ++ D EV A K+ L + ++E + +S+ H++++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
+ +F +VLE SL + + + R + + +YLH VI
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQYLHRNR---VI 143
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIA 639
H DLK N+ L+++L + DFG+A
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLA 168
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 62 EALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTS 121
+ L L+ N + P ++L+ L+L N + F L L L+L DN L
Sbjct: 41 QVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL-K 99
Query: 122 STPELSFLSSLSNCKSLTFIHLSDNPLD 149
S P +F N KSLT I L +NP D
Sbjct: 100 SIPRGAF----DNLKSLTHIWLLNNPWD 123
Score = 36.6 bits (83), Expect = 0.042, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Query: 190 TIDLGGNKLNGSIPITL-SXXXXXXXXXXXXNKLEGSIPDSICRLTELYELELGGNKLFG 248
T+D G L S+P + + KLE + D RLT+L L+L N+L
Sbjct: 21 TVDCSGKSL-ASVPTGIPTTTQVLYLYDNQITKLEPGVFD---RLTQLTRLDLDNNQLTV 76
Query: 249 SIPACFSNLASLRILSLSSNELTSIPL-TFWNLKDILQLNFSSN 291
F L L LSL+ N+L SIP F NLK + + +N
Sbjct: 77 LPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNN 120
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 484 YLELCRATNGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVFNLQCGRAFKSFAVECEM 541
Y + + +N F + IG G F SVY A+L G E + + +L A E +
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQC 72
Query: 542 MKSIRHRNLIKVISSC-SNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLN-IMIDVA 599
+ ++ + + C + + + Y H S L S + FQ + M+++
Sbjct: 73 LTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLS-----FQEVREYMLNLF 127
Query: 600 SALEYLH-FGCLAPVIHCDLKPDNVLLDDNLVAY-LSDFGIAK 640
AL+ +H FG ++H D+KP N L + L Y L DFG+A+
Sbjct: 128 KALKRIHQFG----IVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 499 LIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRAFKSFAVECEMMKSIRHRNLIKVI 554
+G+GGF ++ D EV A K+ L + ++E + +S+ H++++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
+ +F +VLE SL + + + R + + +YLH VI
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQYLHRNR---VI 161
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIA 639
H DLK N+ L+++L + DFG+A
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 31/158 (19%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA+K F Q C R + E +++ RH N+I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 552 -KVISSCSNEEFKALVLEYKPHGSLEKYLYS-------SNCILDIFQRLNIMIDVASALE 603
+I + + E+ K + Y +E LY SN + F + + L+
Sbjct: 91 NDIIRAPTIEQMKDV---YIVQDLMETDLYKLLKCQHLSNDHICYF-----LYQILRGLK 142
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
Y+H A V+H DLKP N+LL+ + DFG+A++
Sbjct: 143 YIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 7/148 (4%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCGRAFKSF-AVECEMMKSIRHRNLI 551
F++ + IG+G FG VYK EV A+K+ +L+ E ++ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 552 KVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA 611
+ S +++EY GS L L+ I+ ++ L+YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP--LEETYIATILREILKGLDYLH---SE 135
Query: 612 PVIHCDLKPDNVLLDDNLVAYLSDFGIA 639
IH D+K NVLL + L+DFG+A
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 34/159 (21%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRAFKSFAVECEMMKSIRHRNLIKV 553
+G G +G V A R+ + VAVK+ +++ C K E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 554 ISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLA 611
+ L LEY G L F R+ +I + A + H +A
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMA 115
Query: 612 PVI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQCGRAF---KSFAVECEMMKSIRHRNLIKVI 554
+G G +G V A R+ + VAVK+ +++ RA ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLAP 612
+ L LEY G L F R+ +I + A + H +A
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMAG 117
Query: 613 VI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQCGRAF---KSFAVECEMMKSIRHRNLIKVI 554
+G G +G V A R+ + VAVK+ +++ RA ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLAP 612
+ L LEY G L F R+ +I + A + H +A
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMAG 117
Query: 613 VI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQCGRAF---KSFAVECEMMKSIRHRNLIKVI 554
+G G +G V A R+ + VAVK+ +++ RA ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLAP 612
+ L LEY G L F R+ +I + A + H +A
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMAG 117
Query: 613 VI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQCGRAF---KSFAVECEMMKSIRHRNLIKVI 554
+G G +G V A R+ + VAVK+ +++ RA ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLAP 612
+ L LEY G L F R+ +I + A + H +A
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMAG 116
Query: 613 VI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQCGRAF---KSFAVECEMMKSIRHRNLIKVI 554
+G G +G V A R+ + VAVK+ +++ RA ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLAP 612
+ L LEY G L F R+ +I + A + H +A
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMAG 116
Query: 613 VI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 62 EALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTS 121
+ L L+ N + P ++L+ L+L N + F L L L+L DN L
Sbjct: 33 QVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL-K 91
Query: 122 STPELSFLSSLSNCKSLTFIHLSDNPLD 149
S P +F N KSLT I L +NP D
Sbjct: 92 SIPRGAF----DNLKSLTHIWLLNNPWD 115
Score = 36.2 bits (82), Expect = 0.055, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Query: 190 TIDLGGNKLNGSIPITL-SXXXXXXXXXXXXNKLEGSIPDSICRLTELYELELGGNKLFG 248
T+D G L S+P + + KLE + D RLT+L L+L N+L
Sbjct: 13 TVDCSGKSL-ASVPTGIPTTTQVLYLYDNQITKLEPGVFD---RLTQLTRLDLDNNQLTV 68
Query: 249 SIPACFSNLASLRILSLSSNELTSIPL-TFWNLKDILQLNFSSN 291
F L L LSL+ N+L SIP F NLK + + +N
Sbjct: 69 LPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNN 112
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 22/166 (13%)
Query: 491 TNGFSENNLIGRGGFG----SVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECE-MMKSI 545
T+G+ IG G + ++KA ME AVK+ + ++ + E E +++
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKA---TNMEFAVKIID----KSKRDPTEEIEILLRYG 73
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSL-EKYLYSSNCILDIFQRLNIMIDVASALEY 604
+H N+I + + ++ +V E G L +K L + ++ + +EY
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEY 131
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDN----LVAYLSDFGIAKLLIGED 646
LH V+H DLKP N+L D + DFG AK L E+
Sbjct: 132 LH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQCGRAF---KSFAVECEMMKSIRHRNLIKVI 554
+G G +G V A R+ + VAVK+ +++ RA ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLAP 612
+ L LEY G L F R+ +I + A + H +A
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMAG 116
Query: 613 VI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQCGRAF---KSFAVECEMMKSIRHRNLIKVI 554
+G G +G V A R+ + VAVK+ +++ RA ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLAP 612
+ L LEY G L F R+ +I + A + H +A
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMAG 116
Query: 613 VI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQCGRAF---KSFAVECEMMKSIRHRNLIKVI 554
+G G +G V A R+ + VAVK+ +++ RA ++ E + K + H N++K
Sbjct: 13 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFY 69
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLAP 612
+ L LEY G L F R+ +I + A + H +A
Sbjct: 70 GHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMAG 115
Query: 613 VI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 116 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 153
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 593 NIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAKLLIGE 645
IM + A++YLH +A H D+KP+N+L N + L+DFG AK GE
Sbjct: 121 EIMKSIGEAIQYLHSINIA---HRDVKPENLLYTSKRPNAILKLTDFGFAKETTGE 173
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 499 LIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRAFKSFAVECEMMKSIRHRNLIKVI 554
+G+GGF ++ D EV A K+ L + ++E + +S+ H++++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
+ +F +VLE SL + L+ L + + + +YLH VI
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVI 137
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIA 639
H DLK N+ L+++L + DFG+A
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 52/126 (41%), Gaps = 10/126 (7%)
Query: 233 LTELYELELGGNKLFGSI-PACFSNLASLRILSLSSNELTSI-PLTFWNLKDILQLNFSS 290
L L +L+L N S+ PA F L L L L L + P F L + L
Sbjct: 78 LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD 137
Query: 291 NFLTGPLP----LEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIP 346
N L LP ++GNL L N SSV GL +L+ L L NR+ P
Sbjct: 138 NALQA-LPDDTFRDLGNLTHLF---LHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP 193
Query: 347 DSFGDL 352
+F DL
Sbjct: 194 HAFRDL 199
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQCGRAF---KSFAVECEMMKSIRHRNLIKVI 554
+G G +G V A R+ + VAVK+ +++ RA ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLAP 612
+ L LEY G L F R+ +I + A + H +A
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMAG 116
Query: 613 VI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRAFKSFAVECEMMKSIRHRNLI-- 551
IG G +G V A + + VA++ F Q C R + E +++ RH N+I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 552 -KVISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 609
+I + + E+ K + +++ L K L + + D + + L+Y+H
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS-- 146
Query: 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
A V+H DLKP N+LL+ + DFG+A++
Sbjct: 147 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQCGRAF---KSFAVECEMMKSIRHRNLIKVI 554
+G G +G V A R+ + VAVK+ +++ RA ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLAP 612
+ L LEY G L F R+ +I + A + H +A
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMAG 117
Query: 613 VI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 52/126 (41%), Gaps = 10/126 (7%)
Query: 233 LTELYELELGGNKLFGSI-PACFSNLASLRILSLSSNELTSI-PLTFWNLKDILQLNFSS 290
L L +L+L N S+ PA F L L L L L + P F L + L
Sbjct: 79 LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD 138
Query: 291 NFLTGPLP----LEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIP 346
N L LP ++GNL L N SSV GL +L+ L L NR+ P
Sbjct: 139 NALQA-LPDDTFRDLGNLTHLF---LHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP 194
Query: 347 DSFGDL 352
+F DL
Sbjct: 195 HAFRDL 200
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQCGRAF---KSFAVECEMMKSIRHRNLIKVI 554
+G G +G V A R+ + VAVK+ +++ RA ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLAP 612
+ L LEY G L F R+ +I + A + H +A
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMAG 116
Query: 613 VI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQCGRAF---KSFAVECEMMKSIRHRNLIKVI 554
+G G +G V A R+ + VAVK+ +++ RA ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLAP 612
+ L LEY G L F R+ +I + A + H +A
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMAG 116
Query: 613 VI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 592 LNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
L+I I +A A+E+LH L +H DLKP N+ + V + DFG+ +
Sbjct: 167 LHIFIQIAEAVEFLHSKGL---MHRDLKPSNIFFTMDDVVKVGDFGLVTAM 214
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 27/162 (16%)
Query: 494 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRAFK----SFAVECEMMKSIRH 547
F +G G F V A + K+F ++C +A K S E +++ I+H
Sbjct: 24 FEFKETLGTGAFSEVVLAE----EKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKH 79
Query: 548 RNLIKVISSCSNEEFKALVLEYKPHGSL-----EKYLYSSNCILDIFQRLNIMIDVASAL 602
N++ + + LV++ G L EK Y+ + ++ V A+
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ------VLDAV 133
Query: 603 EYLHFGCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKL 641
YLH ++H DLKP+N+L D+ +SDFG++K+
Sbjct: 134 YYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM 172
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQCGRAF---KSFAVECEMMKSIRHRNLIKVI 554
+G G +G V A R+ + VAVK+ +++ RA ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLAP 612
+ L LEY G L F R+ +I + A + H +A
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMAG 117
Query: 613 VI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 88 LELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNP 147
L L +NS +TF +LR+LE L L N + + + + SL + L DN
Sbjct: 40 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIE-----VGAFNGLPSLNTLELFDNR 94
Query: 148 LDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSIT-IDLGG-NKLNGSIPIT 205
L + ++ + LS L++ ++ N N IP N S+ +DLG +L
Sbjct: 95 LTTVPTQ-AFEYLS-KLRELWLRN-NPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAA 151
Query: 206 LSXXXXXXXXXXXXNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSL 265
L+ IP+ + L L ELEL GN+L P F L SLR L L
Sbjct: 152 FEGLVNLRYLNLGMCNLK-DIPN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWL 209
Query: 266 SSNELTSIPL-TFWNLKDILQLNFSSNFL 293
++ +I F +LK + +LN S N L
Sbjct: 210 MHAQVATIERNAFDDLKSLEELNLSHNNL 238
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 64/171 (37%), Gaps = 28/171 (16%)
Query: 233 LTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNF 292
L L LEL N+L F L+ LR L L +N + SIP +++ N
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIP------------SYAFNR 129
Query: 293 LTGPLPLEIGNLKVLIGI--------------DFSMNNFSSVIPTEIGGLKNLEYLFLGY 338
+ L++G LK L I + M N + + L LE L L
Sbjct: 130 VPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDI--PNLTALVRLEELELSG 187
Query: 339 NRLEGSIPDSFGDLIXXXXXXXXXXXXXGAIPTSLEKLSYLEDLNLSFNKL 389
NRL+ P SF L + + L LE+LNLS N L
Sbjct: 188 NRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 9/148 (6%)
Query: 498 NLIGRGGFGSVYKARLGDGMEV-AVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKV 553
+IGRG + V RL + A+KV + E + + + +
Sbjct: 11 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 70
Query: 554 ISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ SC E + V+EY G L ++ + + R +++ AL YLH
Sbjct: 71 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERG 126
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+I+ DLK DNVLLD L+D+G+ K
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCK 154
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 13/147 (8%)
Query: 498 NLIGRGGFGSVYKARLGDGMEV-AVKVFNL--QCGRAFKS-FAVECEMMKSIRHRNLIKV 553
+IGRG FG V +L + +V A+K+ N RA + F E +++ + + + +
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 554 ISSCSNEEFKALVLEYKPHGSLEKYLYS-SNCILDIFQRLNI--MIDVASALEYLHFGCL 610
+ ++ LV++Y G L L + + + R + M+ ++ LH+
Sbjct: 140 HYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY--- 196
Query: 611 APVIHCDLKPDNVLLDDNLVAYLSDFG 637
+H D+KPDN+L+D N L+DFG
Sbjct: 197 ---VHRDIKPDNILMDMNGHIRLADFG 220
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 9/148 (6%)
Query: 498 NLIGRGGFGSVYKARLGDGMEV-AVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKV 553
+IGRG + V RL + A+KV + E + + + +
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 554 ISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ SC E + V+EY G L ++ + + R +++ AL YLH
Sbjct: 75 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERG 130
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+I+ DLK DNVLLD L+D+G+ K
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCK 158
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 500 IGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAV-ECEMMKSIRHRNLI---KVI 554
IG G +G V A + + VA+K + + + + E +++ RH N+I +I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 555 SSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPV 613
+ + E+ K + +++ L K L + + D + + L+Y+H A V
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHS---ANV 149
Query: 614 IHCDLKPDNVLLDDNLVAYLSDFGIAKL 641
+H DLKP N+LL+ + DFG+A++
Sbjct: 150 LHRDLKPSNLLLNTTXDLKICDFGLARV 177
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 9/148 (6%)
Query: 498 NLIGRGGFGSVYKARLGDGMEV-AVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKV 553
+IGRG + V RL + A+KV + E + + + +
Sbjct: 26 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 85
Query: 554 ISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ SC E + V+EY G L ++ + + R +++ AL YLH
Sbjct: 86 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERG 141
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+I+ DLK DNVLLD L+D+G+ K
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGMCK 169
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 62 EALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTS 121
+ L L+ N + P ++L+ L+L N + F L L L+L DN L
Sbjct: 33 QVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL-K 91
Query: 122 STPELSFLSSLSNCKSLTFIHLSDNPLD 149
S P +F N +SLT I L +NP D
Sbjct: 92 SIPRGAF----DNLRSLTHIWLLNNPWD 115
Score = 35.4 bits (80), Expect = 0.091, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Query: 190 TIDLGGNKLNGSIPITL-SXXXXXXXXXXXXNKLEGSIPDSICRLTELYELELGGNKLFG 248
T+D G L S+P + + KLE + D RLT+L L+L N+L
Sbjct: 13 TVDCSGKSL-ASVPTGIPTTTQVLYLYDNRITKLEPGVFD---RLTQLTRLDLDNNQLTV 68
Query: 249 SIPACFSNLASLRILSLSSNELTSIPL-TFWNLKDILQLNFSSN 291
F L L LSL+ N+L SIP F NL+ + + +N
Sbjct: 69 LPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLRSLTHIWLLNN 112
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 26/164 (15%)
Query: 500 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSIRHR-NLI 551
+GRG FG V +A + VAVK+ + ++ E +++ I H N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 552 KVISSCSNEEFKALVL-EYKPHGSLEKYLYSSN----------CILDIFQRLNIMI---- 596
++ +C+ +V+ E+ G+L YL S + F L +I
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 597 DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +E+L IH DL N+LL + V + DFG+A+
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 22/166 (13%)
Query: 491 TNGFSENNLIGRGGFGS----VYKARLGDGMEVAVKVFNLQCGRAFKSFAVECE-MMKSI 545
++G+ IG G + V+KA ME AVKV + ++ + + E E +++
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKA---TNMEYAVKVID----KSKRDPSEEIEILLRYG 78
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSL-EKYLYSSNCILDIFQRLNIMIDVASALEY 604
+H N+I + + + LV E G L +K L + ++ + +EY
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK--FFSEREASFVLHTIGKTVEY 136
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDN----LVAYLSDFGIAKLLIGED 646
LH V+H DLKP N+L D + DFG AK L E+
Sbjct: 137 LHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN 179
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 36.6 bits (83), Expect = 0.040, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 66 LWGNN--FSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSST 123
LW NN + P + L L + N + F L L L+L DN+L S
Sbjct: 38 LWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHL-KSI 96
Query: 124 PELSFLSSLSNCKSLTFIHLSDNPLD 149
P +F N KSLT I+L +NP D
Sbjct: 97 PRGAF----DNLKSLTHIYLYNNPWD 118
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 224 GSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPL-TFWNLKD 282
S+P I T+ L L N++ P F +L +L+ L +SN+LT+IP F L
Sbjct: 25 ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQ 82
Query: 283 ILQLNFSSNFLTGPLPLEIGNLKVLIGI 310
+ QL+ + N L NLK L I
Sbjct: 83 LTQLDLNDNHLKSIPRGAFDNLKSLTHI 110
Score = 33.5 bits (75), Expect = 0.33, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 221 KLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPL-TFWN 279
KLE + D + L +LY NKL F L L L L+ N L SIP F N
Sbjct: 47 KLEPGVFDHLVNLQQLY---FNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDN 103
Query: 280 LKDILQLNFSSN 291
LK + + +N
Sbjct: 104 LKSLTHIYLYNN 115
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 22/173 (12%)
Query: 484 YLELCRATNGFSENNLIGRGGFGS----VYKARLGDGMEVAVKVFNLQCGRAFKSFAVEC 539
Y + ++G+ IG G + V+KA ME AVKV + ++ + + E
Sbjct: 19 YFQSMVFSDGYVVKETIGVGSYSECKRCVHKAT---NMEYAVKVID----KSKRDPSEEI 71
Query: 540 E-MMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSL-EKYLYSSNCILDIFQRLNIMID 597
E +++ +H N+I + + + LV E G L +K L + ++
Sbjct: 72 EILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK--FFSEREASFVLHT 129
Query: 598 VASALEYLHFGCLAPVIHCDLKPDNVLLDDN----LVAYLSDFGIAKLLIGED 646
+ +EYLH V+H DLKP N+L D + DFG AK L E+
Sbjct: 130 IGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN 179
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 77/157 (49%), Gaps = 7/157 (4%)
Query: 492 NGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRAFKSFAV-ECEMMKSIRHRN 549
+ F + + +G G G V+K + G+ +A K+ +L+ A ++ + E +++
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL-NIMIDVASALEYLHFG 608
++ + ++ ++ +E+ GSL++ L + I + Q L + I V L YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREK 126
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
++H D+KP N+L++ L DFG++ LI E
Sbjct: 127 --HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE 161
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 28/168 (16%)
Query: 230 ICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFS 289
I L + L LGGNKL + L +L L L+ N+L S+P ++
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFD---------- 106
Query: 290 SNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSF 349
++ NLK L+ ++ N S+ L NL YL+L +N+L+ S+P
Sbjct: 107 ----------KLTNLKELVLVE---NQLQSLPDGVFDKLTNLTYLYLYHNQLQ-SLPKGV 152
Query: 350 GDLIXXXXXXXXXXXXXGAIPTSL-EKLSYLEDLNLSFNKLEGEIPRG 396
D + ++P + +KL+ L+ L+L+ N+L+ +P G
Sbjct: 153 FDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKS-VPDG 199
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 220 NKLEGSIPDSIC-RLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIP 274
N+L+ S+P + +LT L L+L N+L F L L+ LSL+ N+L S+P
Sbjct: 143 NQLQ-SLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVP 197
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 29/126 (23%)
Query: 527 QCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKY--LYSSNC 584
RA++ E +MK + H+N+I +++ + P SLE++ +Y
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVME 109
Query: 585 ILD--IFQRLNIMIDVASALEYLHFGCL--------APVIHCDLKPDNVLLDDNLVAYLS 634
++D + Q + + +D + YL + L A +IH DLKP N+++ + +
Sbjct: 110 LMDANLSQVIQMELD-HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKIL 168
Query: 635 DFGIAK 640
DFG+A+
Sbjct: 169 DFGLAR 174
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 177 GIPEEITNLTNSITIDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSIPDSICRLTEL 236
GIP ++T L L GN+ +P LS N++ S +T+L
Sbjct: 28 GIPRDVTELY------LDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQL 80
Query: 237 YELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIP 274
L L N+L P F L SLR+LSL N+++ +P
Sbjct: 81 LTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVP 118
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%)
Query: 263 LSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIP 322
L L N+ T +P N K + ++ S+N ++ N+ L+ + S N + P
Sbjct: 36 LYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPP 95
Query: 323 TEIGGLKNLEYLFLGYNRLEGSIPDSFGDL 352
GLK+L L L N + +F DL
Sbjct: 96 RTFDGLKSLRLLSLHGNDISVVPEGAFNDL 125
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 9/148 (6%)
Query: 498 NLIGRGGFGSVYKARLGDGMEV-AVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKV 553
+IGRG + V RL + A++V + E + + + +
Sbjct: 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117
Query: 554 ISSCSNEEFKAL-VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP 612
+ SC E + V+EY G L ++ + + R +++ AL YLH
Sbjct: 118 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERG 173
Query: 613 VIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+I+ DLK DNVLLD L+D+G+ K
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCK 201
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 132/364 (36%), Gaps = 65/364 (17%)
Query: 11 NLEELDLRHNKLVGTVPAAIFNMSMXXXXXXXXXXXXXXXSSIADVRLPNLEALLLWGNN 70
N+ L+L HN+L P S + + LP L+ L L N
Sbjct: 26 NITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQI-LPLLKVLNLQHNE 84
Query: 71 FSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSS-------- 122
S + + L+ L+L NS N F N +NL L+L N L+S+
Sbjct: 85 LSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQL 144
Query: 123 -----------------TPELSFLSSLSNCKSLTFIHLSDNPLDGILSK--TSIGNLSHS 163
+ EL FL + SL + LS NPL +IG L
Sbjct: 145 ENLQELLLAKNKILALRSEELEFLGN----SSLRKLDLSSNPLKEFSPGCFQTIGKLFAL 200
Query: 164 LKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLE 223
L + N +++ + E++N T+ + L N+L + T S
Sbjct: 201 LLNNAQLNPHLTEKLCWELSN-TSIQNLSLANNQLLATSESTFSG--------------- 244
Query: 224 GSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSI-PLTFWNLKD 282
+ T L +L+L N L FS L SLR LSL N + + P +F+ L +
Sbjct: 245 -------LKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSN 297
Query: 283 ILQLNFSSNFLTGPLPL---------EIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEY 333
+ L+ F + L LK L ++ NN S GL +L+Y
Sbjct: 298 LRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKY 357
Query: 334 LFLG 337
L L
Sbjct: 358 LSLS 361
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 106/275 (38%), Gaps = 15/275 (5%)
Query: 83 SKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIH 142
S +++L L+ N P F L L+ N ++ PEL + L L ++
Sbjct: 25 SNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPL-----LKVLN 79
Query: 143 LSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSI 202
L N L I +T + +L + + + ++ N N I +DL N L+ +
Sbjct: 80 LQHNELSQISDQTFV--FCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTK 137
Query: 203 PITLSXXXXXXXXXXXXNKLEGSIPDSICRL--TELYELELGGNKLFGSIPACFSNLASL 260
T NK+ + + L + L +L+L N L P CF + L
Sbjct: 138 LGTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKL 197
Query: 261 RILSLSSNELTS--IPLTFWNLKD--ILQLNFSSNFLTGPLPLEIGNLKV--LIGIDFSM 314
L L++ +L W L + I L+ ++N L LK L +D S
Sbjct: 198 FALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSY 257
Query: 315 NNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSF 349
NN V L +L YL L YN ++ P SF
Sbjct: 258 NNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSF 292
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 121/319 (37%), Gaps = 45/319 (14%)
Query: 85 LSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLS----SLSNCKSLTF 140
L L L N+ P +F L NL +L+L+ + S S + S K L +
Sbjct: 274 LRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEY 333
Query: 141 IHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNS--ITIDLGGNKL 198
+++ DN + S T G +S + ++ E +L +S +T++L N +
Sbjct: 334 LNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLNLTKNHI 393
Query: 199 NGSIPITLSXXXXXXXXXXXXNKLEGSIPDSICR-LTELYELELGGNKLFGSIPACFSNL 257
+ T S N++E + R L ++E+ L NK + F+ +
Sbjct: 394 SKIANGTFSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTSSFALV 453
Query: 258 ASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNF 317
SL+ L L L ++ ++ P L+ L +D S NN
Sbjct: 454 PSLQRLMLRRVALKNVDIS---------------------PSPFRPLRNLTILDLSNNNI 492
Query: 318 SSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLIXXXXXXXXXXXXXGAIPTSLEKLS 377
+++ + GL+NLE L +N L G L+ LS
Sbjct: 493 ANINEDLLEGLENLEILDFQHNNL----------------ARLWKRANPGGPVNFLKGLS 536
Query: 378 YLEDLNLSFNKLEGEIPRG 396
+L LNL N L+ EIP G
Sbjct: 537 HLHILNLESNGLD-EIPVG 554
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 12/151 (7%)
Query: 494 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV----FNLQCGRAFKSFAVECEMMKSIRHR 548
F + +G G +G V+K R DG AVK F RA K A K +H
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARK-LAEVGSHEKVGQHP 117
Query: 549 NLIKVISSCSNEEFKALVLEYKPHG-SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 607
+++ + EE L L+ + G SL+++ + L Q + D AL +LH
Sbjct: 118 CCVRLEQAW--EEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS 175
Query: 608 GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGI 638
L +H D+KP N+ L L DFG+
Sbjct: 176 QGL---VHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 593 NIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643
I + + ALE+LH VIH D+KP NVL++ + DFGI+ L+
Sbjct: 157 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 491 TNGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSI 545
++ + +G G +G V K +L G E A+K+ + E ++K +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLN---IMIDVASAL 602
H N++K+ ++ LV+E G L + + F ++ IM V S
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVIMKQVLSGT 134
Query: 603 EYLHFGCLAPVIHCDLKPDNVLLD----DNLVAYLSDFGIA 639
YLH ++H DLKP+N+LL+ D L+ + DFG++
Sbjct: 135 TYLH---KHNIVHRDLKPENLLLESKSRDALIK-IVDFGLS 171
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 500 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSIRHR-NLI 551
+GRG FG V +A + VAVK+ + ++ E +++ I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 552 KVISSCSNEEFKALVL-EYKPHGSLEKYLYSSN-----------CILDIFQRLNIMI--- 596
++ +C+ +V+ E+ G+L YL S + F L +I
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 597 -DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +E+L IH DL N+LL + V + DFG+A+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 500 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSIRHR-NLI 551
+GRG FG V +A + VAVK+ + ++ E +++ I H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 552 KVISSCSNEEFKALVL-EYKPHGSLEKYLYSSN--------CILDIFQRLNIM------- 595
++ +C+ +V+ E+ G+L YL S D+++ +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 596 IDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +E+L IH DL N+LL + V + DFG+A+
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 233
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 78/187 (41%), Gaps = 38/187 (20%)
Query: 494 FSENNL-----IGRGGFGSVYKAR-LGDGME-----VAVKVFNLQCGRAFK-SFAVECEM 541
F NNL +G G FG V +A G G E VAVK+ K + E ++
Sbjct: 28 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 542 MKSI-RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCI--------------- 585
M + +H N++ ++ +C++ ++ EY +G L +L
Sbjct: 88 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGL 147
Query: 586 -------LDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGI 638
L++ L+ VA + +L IH D+ NVLL + VA + DFG+
Sbjct: 148 DKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGL 204
Query: 639 AKLLIGE 645
A+ ++ +
Sbjct: 205 ARDIMND 211
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 31/115 (26%)
Query: 233 LTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNF 292
LT++ ELEL GN L + + L S++ L L+S ++T +
Sbjct: 90 LTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDV------------------- 128
Query: 293 LTGPLPLE-IGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIP 346
PL + NL+VL +N +++ P + GL NL+YL +G N++ P
Sbjct: 129 ----TPLAGLSNLQVLY---LDLNQITNISP--LAGLTNLQYLSIGNNQVNDLTP 174
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 10/91 (10%)
Query: 83 SKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIH 142
S L +L L N + P L NL++L++ +N + TP L+N LT +
Sbjct: 135 SNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNNQVNDLTP-------LANLSKLTTLR 185
Query: 143 LSDNPLDGILSKTSIGNLSH-SLKDFYMSNC 172
DN + I S+ NL LKD +S+
Sbjct: 186 ADDNKISDISPLASLPNLIEVHLKDNQISDV 216
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 15/89 (16%)
Query: 263 LSLSSNELTSI-PLTFWNLKDILQLNFSSNFLTGPLPLE----IGNLKVLIGIDFSMNNF 317
L L N++T + PL NL I +L S N PL+ I L+ + +D +
Sbjct: 74 LELKDNQITDLTPL--KNLTKITELELSGN------PLKNVSAIAGLQSIKTLDLTSTQI 125
Query: 318 SSVIPTEIGGLKNLEYLFLGYNRLEGSIP 346
+ V P + GL NL+ L+L N++ P
Sbjct: 126 TDVTP--LAGLSNLQVLYLDLNQITNISP 152
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 6/146 (4%)
Query: 500 IGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G FG V++ G A K ++ E + M +RH L+ + +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
++ ++ E+ G L + + + + + + M V L ++H +H DL
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY---VHLDL 281
Query: 619 KPDNVLLDDNLVAYLS--DFGIAKLL 642
KP+N++ L DFG+ L
Sbjct: 282 KPENIMFTTKRSNELKLIDFGLTAHL 307
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 6/146 (4%)
Query: 500 IGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
+G G FG V++ G A K ++ E + M +RH L+ + +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618
++ ++ E+ G L + + + + + + M V L ++H +H DL
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY---VHLDL 175
Query: 619 KPDNVLLDDNLVAYLS--DFGIAKLL 642
KP+N++ L DFG+ L
Sbjct: 176 KPENIMFTTKRSNELKLIDFGLTAHL 201
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 16/148 (10%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559
IG G FG R E+ + + + ++ E +S+RH N+++
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 560 EEFKALVLEYKPHGSLEKYL-----YSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
A+V+EY G L + + +S + FQ+L + A A++ V
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ---------VA 137
Query: 615 HCDLKPDNVLLDDNLVAYL--SDFGIAK 640
H DLK +N LLD + L +DFG +K
Sbjct: 138 HRDLKLENTLLDGSPAPRLKIADFGYSK 165
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 500 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSIRHR-NLI 551
+GRG FG V +A + VAVK+ + ++ E +++ I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 552 KVISSCSNEEFKALVL-EYKPHGSLEKYLYSSN-----------CILDIFQRLNIMI--- 596
++ +C+ +V+ E+ G+L YL S + F L +I
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 597 -DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +E+L IH DL N+LL + V + DFG+A+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 491 TNGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVFNLQCGRAFKSFAV---ECEMMKSI 545
++ + +G G +G V K +L G E A+K+ + E ++K +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLN---IMIDVASAL 602
H N++K+ ++ LV+E G L + + F ++ IM V S
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVIMKQVLSGT 117
Query: 603 EYLHFGCLAPVIHCDLKPDNVLLD----DNLVAYLSDFGIA 639
YLH ++H DLKP+N+LL+ D L+ + DFG++
Sbjct: 118 TYLH---KHNIVHRDLKPENLLLESKSRDALIK-IVDFGLS 154
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P +LE++ +Y ++D + Q + + +D + YL + L
Sbjct: 92 ------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELD-HERMSYLLYQMLXG 138
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 85/205 (41%), Gaps = 14/205 (6%)
Query: 52 SIADVRLPNLEALLLWGN--NFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNL 109
+ ++V LP+LE L L N +F G + F + L L+LS N N G L L
Sbjct: 340 AFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLG-LEQL 398
Query: 110 EWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDN-PLDGILSKTSIGNLSHSLKDFY 168
E L+ + + L + E S SL N L H +GI + S SL+
Sbjct: 399 EHLDFQHSNLKQMS-EFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS------SLEVLK 451
Query: 169 MS-NCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSIP 227
M+ N +P+ T L N +DL +L P + N+L+ S+P
Sbjct: 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLK-SVP 510
Query: 228 DSIC-RLTELYELELGGNKLFGSIP 251
D I RLT L ++ L N S P
Sbjct: 511 DGIFDRLTSLQKIWLHTNPWDCSCP 535
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 223 EGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIP 274
E +PD L L L+L +L P F++L+SL++L+++SN+L S+P
Sbjct: 459 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVP 510
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 3/141 (2%)
Query: 258 ASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIG-NLKVLIGIDFSMNN 316
SL+ L LS N + ++ F L+ + L+F + L + +L+ LI +D S +
Sbjct: 373 TSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 432
Query: 317 FSSVIPTEIGGLKNLEYLFLGYNRL-EGSIPDSFGDLIXXXXXXXXXXXXXGAIPTSLEK 375
GL +LE L + N E +PD F +L PT+
Sbjct: 433 TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS 492
Query: 376 LSYLEDLNLSFNKLEGEIPRG 396
LS L+ LN++ N+L+ +P G
Sbjct: 493 LSSLQVLNMASNQLKS-VPDG 512
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 8/143 (5%)
Query: 9 LQNLEELDLRHNKLVGTVPAAIF-NMSMXXXXXXXXXXXXXXXSSIADVRLPNLEALLLW 67
L+ LE LD +H+ L ++F ++ + I + L +LE L +
Sbjct: 395 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN-GLSSLEVLKMA 453
Query: 68 GNNFSGT-IPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPEL 126
GN+F +P L+ L+LSQ P F +L +L+ LN+ N L S P+
Sbjct: 454 GNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQL-KSVPDG 512
Query: 127 SFLSSLSNCKSLTFIHLSDNPLD 149
F SL I L NP D
Sbjct: 513 IF----DRLTSLQKIWLHTNPWD 531
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 61/131 (46%), Gaps = 22/131 (16%)
Query: 230 ICRLTELYELELGGNKLFG-SIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNF 288
I L L EL + N + +P FSNL +L L LSSN++ SI T +L+ + Q+
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT--DLRVLHQMPL 177
Query: 289 SS----------NFLTGPLPLEIGNLKVLIGIDFSMNNFSS--VIPTEIGGLKNLEY--L 334
+ NF+ EI K+ + NNF S V+ T I GL LE L
Sbjct: 178 LNLSLDLSLNPMNFIQPGAFKEIRLHKLTL-----RNNFDSLNVMKTCIQGLAGLEVHRL 232
Query: 335 FLGYNRLEGSI 345
LG R EG++
Sbjct: 233 VLGEFRNEGNL 243
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 95/238 (39%), Gaps = 38/238 (15%)
Query: 58 LPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDN 117
L +L AL+L N S + KL L +S+N PN +L L + DN
Sbjct: 77 LQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVELR---IHDN 133
Query: 118 YLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVS-G 176
+ P+ F S +++ I + NPL+ S G LK Y+
Sbjct: 134 RI-RKVPKGVF----SGLRNMNCIEMGGNPLEN--SGFEPGAFD-GLKLNYLRISEAKLT 185
Query: 177 GIPEEITNLTNSITIDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSIPDSICRLTEL 236
GIP+++ N + +D NK++ + + R ++L
Sbjct: 186 GIPKDLPETLNELHLD--------------------------HNKIQAIELEDLLRYSKL 219
Query: 237 YELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLT 294
Y L LG N++ S L +LR L L +N+L+ +P +LK + + +N +T
Sbjct: 220 YRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNIT 277
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 29/126 (23%)
Query: 527 QCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKY--LYSSNC 584
RA++ E +MK + H+N+I +++ + P SLE++ +Y
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVME 109
Query: 585 ILD--IFQRLNIMIDVASALEYLHFGCL--------APVIHCDLKPDNVLLDDNLVAYLS 634
++D + Q + + +D + YL + L A +IH DLKP N+++ + +
Sbjct: 110 LMDANLSQVIQMELD-HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKIL 168
Query: 635 DFGIAK 640
DFG+A+
Sbjct: 169 DFGLAR 174
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 500 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSIRHR-NLI 551
+GRG FG V +A + VAVK+ + ++ E +++ I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 552 KVISSCSNEEFKALVL-EYKPHGSLEKYLYSSN--------CILDIFQRLNIM------- 595
++ +C+ +V+ E+ G+L YL S D+++ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 596 IDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +E+L IH DL N+LL + V + DFG+A+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 500 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSIRHR-NLI 551
+GRG FG V +A + VAVK+ + ++ E +++ I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 552 KVISSCSNEEFKALVL-EYKPHGSLEKYLYSSN--------CILDIFQRLNIM------- 595
++ +C+ +V+ E+ G+L YL S D+++ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 596 IDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +E+L IH DL N+LL + V + DFG+A+
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%), Gaps = 14/119 (11%)
Query: 239 LELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPL--TFWNLKDILQLNFSSNFLTGP 296
L+ G K F + N++SL L +S N L S T + IL LN SSN LTG
Sbjct: 384 LQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGS 443
Query: 297 ----LPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGD 351
LP ++ KVL D N S IP ++ L+ L+ L + N+L+ S+PD D
Sbjct: 444 VFRCLPPKV---KVL---DLHNNRIMS-IPKDVTHLQALQELNVASNQLK-SVPDGVFD 494
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 220 NKLEGSIPDSICRLTE-LYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFW 278
N L D C E + L L N L GS+ C +++L L +N + SIP
Sbjct: 413 NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVT 470
Query: 279 NLKDILQLNFSSNFL 293
+L+ + +LN +SN L
Sbjct: 471 HLQALQELNVASNQL 485
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 184 NLTNSITIDLGGNKLNG-SIPITLSXXXXXXXXXXXXNKLEGSIPDSICRLTELYELELG 242
N+++ T+D+ N LN + T + N L GS+ C ++ L+L
Sbjct: 401 NMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFR--CLPPKVKVLDLH 458
Query: 243 GNKLFGSIPACFSNLASLRILSLSSNELTSIP 274
N++ SIP ++L +L+ L+++SN+L S+P
Sbjct: 459 NNRIM-SIPKDVTHLQALQELNVASNQLKSVP 489
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 500 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSIRHR-NLI 551
+GRG FG V +A + VAVK+ + ++ E +++ I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 552 KVISSCSNEEFKALVL-EYKPHGSLEKYLYSSN--------CILDIFQRLNIM------- 595
++ +C+ +V+ E+ G+L YL S D+++ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 596 IDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +E+L IH DL N+LL + V + DFG+A+
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P +LE++ +Y ++D + Q + + +D + YL + L
Sbjct: 92 ------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELD-HERMSYLLYQMLCG 138
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 593 NIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
I + + ALE+LH VIH D+KP NVL++ + DFGI+ L+ +
Sbjct: 113 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD 163
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 500 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSIRHR-NLI 551
+GRG FG V +A + VAVK+ + ++ E +++ I H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 552 KVISSCSNEEFKALVL-EYKPHGSLEKYLYSSN--------CILDIFQRLNIM------- 595
++ +C+ +V+ E+ G+L YL S D+++ +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 596 IDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +E+L IH DL N+LL + V + DFG+A+
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 198
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 500 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSIRHR-NLI 551
+GRG FG V +A + VAVK+ + ++ E +++ I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 552 KVISSCSNEEFKALVL-EYKPHGSLEKYLYSSN-----------CILDIFQRLNIMI--- 596
++ +C+ +V+ E+ G+L YL S + F L +I
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 597 -DVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +E+L IH DL N+LL + V + DFG+A+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 500 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-FKSFAVECEMMKSIRHR-NLI 551
+GRG FG V +A + VAVK+ + ++ E +++ I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 552 KVISSCSNEEFKALVL-EYKPHGSLEKYLYSSN--------CILDIFQRLNIM------- 595
++ +C+ +V+ E+ G+L YL S D+++ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 596 IDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
VA +E+L IH DL N+LL + V + DFG+A+
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 29/126 (23%)
Query: 527 QCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKY--LYSSNC 584
RA++ E +MK + H+N+I +++ + P SLE++ +Y
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVME 109
Query: 585 ILD--IFQRLNIMIDVASALEYLHFGCL--------APVIHCDLKPDNVLLDDNLVAYLS 634
++D + Q + + +D + YL + L A +IH DLKP N+++ + +
Sbjct: 110 LMDANLSQVIQMELD-HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKIL 168
Query: 635 DFGIAK 640
DFG+A+
Sbjct: 169 DFGLAR 174
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 32/150 (21%)
Query: 500 IGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFKSFAV-ECEMMKSIRHRN-------- 549
+G G F +V+ + G + VA+KV ++ + A+ E ++KS+R+ +
Sbjct: 29 LGWGHFSTVWLSWDIQGKKFVAMKV--VKSAEHYTETALDEIRLLKSVRNSDPNDPNREM 86
Query: 550 LIKVIS----SCSNEEFKALVLEYKPHGSLEKYLYSSN-------CILDIFQRLNIMIDV 598
+++++ S N +V E H L K++ SN C+ I Q+ V
Sbjct: 87 VVQLLDDFKISGVNGTHICMVFEVLGH-HLLKWIIKSNYQGLPLPCVKKIIQQ------V 139
Query: 599 ASALEYLHFGCLAPVIHCDLKPDNVLLDDN 628
L+YLH C +IH D+KP+N+LL N
Sbjct: 140 LQGLDYLHTKCR--IIHTDIKPENILLSVN 167
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P +LE++ +Y ++D + Q + + +D + YL + L
Sbjct: 92 ------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELD-HERMSYLLYQMLXG 138
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P +LE++ +Y ++D + Q + + +D + YL + L
Sbjct: 85 ------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELD-HERMSYLLYQMLXG 131
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 32/150 (21%)
Query: 500 IGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFKSFAV-ECEMMKSIRHRN-------- 549
+G G F +V+ + G + VA+KV ++ + A+ E ++KS+R+ +
Sbjct: 45 LGWGHFSTVWLSWDIQGKKFVAMKV--VKSAEHYTETALDEIRLLKSVRNSDPNDPNREM 102
Query: 550 LIKVIS----SCSNEEFKALVLEYKPHGSLEKYLYSSN-------CILDIFQRLNIMIDV 598
+++++ S N +V E H L K++ SN C+ I Q+ V
Sbjct: 103 VVQLLDDFKISGVNGTHICMVFEVLGHHLL-KWIIKSNYQGLPLPCVKKIIQQ------V 155
Query: 599 ASALEYLHFGCLAPVIHCDLKPDNVLLDDN 628
L+YLH C +IH D+KP+N+LL N
Sbjct: 156 LQGLDYLHTKCR--IIHTDIKPENILLSVN 183
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 594 IMIDVASALEYLHFGCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKL 641
IM + SA+ ++H V+H DLKP+N+L +DNL + DFG A+L
Sbjct: 111 IMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 22/166 (13%)
Query: 491 TNGFSENNLIGRGGFG----SVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECE-MMKSI 545
T+G+ IG G + ++KA E AVK+ + ++ + E E +++
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKA---TNXEFAVKIID----KSKRDPTEEIEILLRYG 73
Query: 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSL-EKYLYSSNCILDIFQRLNIMIDVASALEY 604
+H N+I + + ++ +V E G L +K L + ++ + +EY
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQK--FFSEREASAVLFTITKTVEY 131
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDN----LVAYLSDFGIAKLLIGED 646
LH V+H DLKP N+L D + DFG AK L E+
Sbjct: 132 LH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 31/204 (15%)
Query: 459 RYRKRGKQPSNDANMPLVATWRTFSYLELCRATNGFSENNLIGRGGFGSVYKARLGDGME 518
+ RKRG + +A F N ++G G G+V G
Sbjct: 4 KKRKRGSRGGKKGRKSRIANIPNFEQ----SLKNLVVSEKILGYGSSGTVVFQGSFQGRP 59
Query: 519 VAVKVFNLQ-CGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEK 577
VAVK + C A + + +S H N+I+ S + + F + LE + +L+
Sbjct: 60 VAVKRMLIDFCDIALMEIKL---LTESDDHPNVIRYYCSETTDRFLYIALEL-CNLNLQD 115
Query: 578 YLYSSNC------ILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLD----- 626
+ S N + + ++++ +AS + +LH +IH DLKP N+L+
Sbjct: 116 LVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRF 172
Query: 627 --------DNLVAYLSDFGIAKLL 642
+NL +SDFG+ K L
Sbjct: 173 TADQQTGAENLRILISDFGLCKKL 196
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 116/268 (43%), Gaps = 53/268 (19%)
Query: 66 LWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTS---- 121
L+ +NF G +P K++ ++L +N + TF L L+ L+LRDN LT+
Sbjct: 329 LYSSNFYG-LP-------KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFI 380
Query: 122 -STPELSFLS-----SLSNCK-SLTFIHLSDNPLDGILSKTSIGNLSH----SLKDFYMS 170
S P++ FLS +L + IHLS+N L+ + + + H L S
Sbjct: 381 PSIPDI-FLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFS 439
Query: 171 NCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSIPDSI 230
+C+ P E +L + LG N L + L + EG
Sbjct: 440 SCS-GDQTPSENPSLEQ---LFLGENMLQLAWETELC-----------WDVFEG------ 478
Query: 231 CRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQ-LNFS 289
L+ L L L N L P FS+L +LR LSL+SN LT L+ +L L+ L+ S
Sbjct: 479 --LSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTV--LSHNDLPANLEILDIS 534
Query: 290 SNFLTGPLPLEIGNLKVLIGIDFSMNNF 317
N L P P +L VL D + N F
Sbjct: 535 RNQLLAPNPDVFVSLSVL---DITHNKF 559
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 593 NIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
+ + + AL YL VIH D+KP N+LLD+ L DFGI+ L+ +
Sbjct: 128 KMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 24/192 (12%)
Query: 464 GKQPSNDANMPLVATWRTFSYLELCRATNGFSENNLIGRGGFGSVYKA-RLGDGMEVAVK 522
G P ND + +A + LE + + L+G GGFGSVY R+ D + VA+K
Sbjct: 1 GAAPCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 55
Query: 523 VFNLQCGRAFK--------SFAVECEMMKSIRH--RNLIKVISSCSNEEFKALVLEY-KP 571
+++ R +E ++K + +I+++ + L+LE +P
Sbjct: 56 --HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 113
Query: 572 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVA 631
L ++ + + R + V A+ + H C V+H D+K +N+L+D N
Sbjct: 114 VQDLFDFITERGALQEELAR-SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGE 169
Query: 632 -YLSDFGIAKLL 642
L DFG LL
Sbjct: 170 LKLIDFGSGALL 181
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 24/192 (12%)
Query: 464 GKQPSNDANMPLVATWRTFSYLELCRATNGFSENNLIGRGGFGSVYKA-RLGDGMEVAVK 522
G P ND + +A + LE + + L+G GGFGSVY R+ D + VA+K
Sbjct: 1 GAAPCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 55
Query: 523 VFNLQCGRAFK--------SFAVECEMMKSIRH--RNLIKVISSCSNEEFKALVLEY-KP 571
+++ R +E ++K + +I+++ + L+LE +P
Sbjct: 56 --HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 113
Query: 572 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVA 631
L ++ + + R + V A+ + H C V+H D+K +N+L+D N
Sbjct: 114 VQDLFDFITERGALQEELAR-SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGE 169
Query: 632 -YLSDFGIAKLL 642
L DFG LL
Sbjct: 170 LKLIDFGSGALL 181
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 492 NGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRAFKSFAV-ECEMMKSIRHRN 549
+ F + + +G G G V+K + G+ +A K+ +L+ A ++ + E +++
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFG 608
++ + ++ ++ +E+ GSL++ L + I + I +++I V L YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 185
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643
++H D+KP N+L++ L DFG++ LI
Sbjct: 186 --HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 218
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 42/163 (25%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQCGRAFKSFAVEC-EMMKS-------IRHRN 549
+G G +G V A R+ + VAVK+ +++ AV+C E +K + H N
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-------RAVDCPENIKKEICINAMLNHEN 66
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHF 607
++K + L LEY G L F R+ +I + A + H
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH- 112
Query: 608 GCLAPVI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
+A V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 24/192 (12%)
Query: 464 GKQPSNDANMPLVATWRTFSYLELCRATNGFSENNLIGRGGFGSVYKA-RLGDGMEVAVK 522
G P ND + +A + LE + + L+G GGFGSVY R+ D + VA+K
Sbjct: 1 GAAPCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 55
Query: 523 VFNLQCGRAFK--------SFAVECEMMKSIRH--RNLIKVISSCSNEEFKALVLEY-KP 571
+++ R +E ++K + +I+++ + L+LE +P
Sbjct: 56 --HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 113
Query: 572 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVA 631
L ++ + + R + V A+ + H C V+H D+K +N+L+D N
Sbjct: 114 VQDLFDFITERGALQEELAR-SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGE 169
Query: 632 -YLSDFGIAKLL 642
L DFG LL
Sbjct: 170 LKLIDFGSGALL 181
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 31/204 (15%)
Query: 459 RYRKRGKQPSNDANMPLVATWRTFSYLELCRATNGFSENNLIGRGGFGSVYKARLGDGME 518
+ RKRG + +A F N ++G G G+V G
Sbjct: 4 KKRKRGSRGGKKGRKSRIANIPNFEQ----SLKNLVVSEKILGYGSSGTVVFQGSFQGRP 59
Query: 519 VAVKVFNLQ-CGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEK 577
VAVK + C A + + +S H N+I+ S + + F + LE + +L+
Sbjct: 60 VAVKRMLIDFCDIALMEIKL---LTESDDHPNVIRYYCSETTDRFLYIALEL-CNLNLQD 115
Query: 578 YLYSSNC------ILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLD----- 626
+ S N + + ++++ +AS + +LH +IH DLKP N+L+
Sbjct: 116 LVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRF 172
Query: 627 --------DNLVAYLSDFGIAKLL 642
+NL +SDFG+ K L
Sbjct: 173 TADQQTGAENLRILISDFGLCKKL 196
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 29/126 (23%)
Query: 527 QCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKY--LYSSNC 584
RA++ E +MK + H+N+I +++ + P SLE++ +Y
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVME 109
Query: 585 ILD--IFQRLNIMIDVASALEYLHFGCL--------APVIHCDLKPDNVLLDDNLVAYLS 634
++D + Q + + +D + YL + L A +IH DLKP N+++ + +
Sbjct: 110 LMDANLSQVIQMELD-HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKIL 168
Query: 635 DFGIAK 640
DFG+A+
Sbjct: 169 DFGLAR 174
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 25/174 (14%)
Query: 112 LNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDN-----PLDGILSKTSIGNLSHSLKD 166
+N LT+ P+L K T +HLS+N L ++ T + L+ L
Sbjct: 15 VNCDKRQLTALPPDLP--------KDTTILHLSENLLYTFSLATLMPYTRLTQLN--LDR 64
Query: 167 FYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSI 226
++ V G +P T+DL N+L S+P+ N+L S+
Sbjct: 65 CELTKLQVDGTLPV-------LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SL 115
Query: 227 PDSICR-LTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWN 279
P R L EL EL L GN+L P + L LSL++N+LT +P N
Sbjct: 116 PLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 32/158 (20%)
Query: 500 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQCGRAF---KSFAVECEMMKSIRHRNLIKVI 554
+G G G V A R+ + VAVK+ +++ RA ++ E + K + H N++K
Sbjct: 14 LGEGAAGEVQLAVNRVTEEA-VAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLHFGCLAP 612
+ L LEY G L F R+ +I + A + H +A
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFH-QLMAG 116
Query: 613 VI--------HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642
V+ H D+KP+N+LLD+ +SDFG+A +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 25/174 (14%)
Query: 112 LNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDN-----PLDGILSKTSIGNLSHSLKD 166
+N LT+ P+L K T +HLS+N L ++ T + L+ L
Sbjct: 15 VNCDKRQLTALPPDLP--------KDTTILHLSENLLYTFSLATLMPYTRLTQLN--LDR 64
Query: 167 FYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSI 226
++ V G +P T+DL N+L S+P+ N+L S+
Sbjct: 65 CELTKLQVDGTLPV-------LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SL 115
Query: 227 PDSICR-LTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWN 279
P R L EL EL L GN+L P + L LSL++N+LT +P N
Sbjct: 116 PLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Query: 492 NGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRAFKSFAV-ECEMMKSIRHRN 549
+ F + + +G G G V+K + G+ +A K+ +L+ A ++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL-NIMIDVASALEYLHFG 608
++ + ++ ++ +E+ GSL++ L + I + Q L + I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREK 123
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643
++H D+KP N+L++ L DFG++ LI
Sbjct: 124 --HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/194 (19%), Positives = 79/194 (40%), Gaps = 16/194 (8%)
Query: 459 RYRKRGKQPSNDANMPLVATWRTFSYLELCRATNGFSENNLIGRGGFGSVYKARLGDGME 518
+Y K + ND + F+ + LC N F + + +
Sbjct: 21 KYVKEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDK 80
Query: 519 VAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSL--- 575
+++K + F E +++ I++ + +N + ++ EY + S+
Sbjct: 81 ISIK-------SKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKF 133
Query: 576 EKYLY----SSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVA 631
++Y + + C + I I+ V ++ Y+H + H D+KP N+L+D N
Sbjct: 134 DEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRV 191
Query: 632 YLSDFGIAKLLIGE 645
LSDFG ++ ++ +
Sbjct: 192 KLSDFGESEYMVDK 205
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 29/126 (23%)
Query: 527 QCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKY--LYSSNC 584
RA++ E +MK + H+N+I +++ + P SLE++ +Y
Sbjct: 66 HAKRAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVME 109
Query: 585 ILD--IFQRLNIMIDVASALEYLHFGCL--------APVIHCDLKPDNVLLDDNLVAYLS 634
++D + Q + + +D + YL + L A +IH DLKP N+++ + +
Sbjct: 110 LMDANLSQVIQMELD-HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKIL 168
Query: 635 DFGIAK 640
DFG+A+
Sbjct: 169 DFGLAR 174
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 492 NGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRAFKSFAV-ECEMMKSIRHRN 549
+ F + + +G G G V+K + G+ +A K+ +L+ A ++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFG 608
++ + ++ ++ +E+ GSL++ L + I + I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643
++H D+KP N+L++ L DFG++ LI
Sbjct: 124 --HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 492 NGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRAFKSFAV-ECEMMKSIRHRN 549
+ F + + +G G G V+K + G+ +A K+ +L+ A ++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFG 608
++ + ++ ++ +E+ GSL++ L + I + I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643
++H D+KP N+L++ L DFG++ LI
Sbjct: 124 --HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 136 KSLTFIHLSDN-----PLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSIT 190
K T +HLS+N L ++ T + L+ L ++ V G +P T
Sbjct: 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLN--LDRCELTKLQVDGTLPV-------LGT 81
Query: 191 IDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSIPDSICR-LTELYELELGGNKLFGS 249
+DL N+L S+P+ N+L S+P R L EL EL L GN+L
Sbjct: 82 LDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTL 139
Query: 250 IPACFSNLASLRILSLSSNELTSIPLTFWN 279
P + L LSL++N+LT +P N
Sbjct: 140 PPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P +LE++ +Y ++D + Q + + +D + YL + L
Sbjct: 92 ------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLCG 138
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 27/165 (16%)
Query: 498 NLIGRGGFGSVYKARLGDGMEVAVKVFNLQ-CGRAFKSFAVECEMMKSIRHRNLIKVISS 556
++G G G+V G VAVK + C A + + +S H N+I+ S
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKL---LTESDDHPNVIRYYCS 77
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNC------ILDIFQRLNIMIDVASALEYLHFGCL 610
+ + F + LE + +L+ + S N + + ++++ +AS + +LH
Sbjct: 78 ETTDRFLYIALEL-CNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS--- 133
Query: 611 APVIHCDLKPDNVLLD-------------DNLVAYLSDFGIAKLL 642
+IH DLKP N+L+ +NL +SDFG+ K L
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 136 KSLTFIHLSDN-----PLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSIT 190
K T +HLS+N L ++ T + L+ L ++ V G +P T
Sbjct: 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLN--LDRCELTKLQVDGTLPV-------LGT 81
Query: 191 IDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSIPDSICR-LTELYELELGGNKLFGS 249
+DL N+L S+P+ N+L S+P R L EL EL L GN+L
Sbjct: 82 LDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTL 139
Query: 250 IPACFSNLASLRILSLSSNELTSIPLTFWN 279
P + L LSL++N+LT +P N
Sbjct: 140 PPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 27/165 (16%)
Query: 498 NLIGRGGFGSVYKARLGDGMEVAVKVFNLQ-CGRAFKSFAVECEMMKSIRHRNLIKVISS 556
++G G G+V G VAVK + C A + + +S H N+I+ S
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKL---LTESDDHPNVIRYYCS 77
Query: 557 CSNEEFKALVLEYKPHGSLEKYLYSSNC------ILDIFQRLNIMIDVASALEYLHFGCL 610
+ + F + LE + +L+ + S N + + ++++ +AS + +LH
Sbjct: 78 ETTDRFLYIALEL-CNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS--- 133
Query: 611 APVIHCDLKPDNVLLD-------------DNLVAYLSDFGIAKLL 642
+IH DLKP N+L+ +NL +SDFG+ K L
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 110/275 (40%), Gaps = 53/275 (19%)
Query: 83 SKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLS--SLSNCKSLTF 140
S+L+ L++ N+ S P L L+ LNL+ N ELS LS + + C +LT
Sbjct: 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN-------ELSQLSDKTFAFCTNLTE 101
Query: 141 IHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNG 200
+HL N + I + + N IT+DL N L+
Sbjct: 102 LHLMSNSIQKIKNNPFVKQ--------------------------KNLITLDLSHNGLSS 135
Query: 201 SIPITLSXXXXXXXXXXXXNKLEG--SIPDSICRLTELYELELGGNKLFGSIPACFSNLA 258
+ T NK++ S I + L +LEL N++ P CF +
Sbjct: 136 TKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIG 195
Query: 259 SLRILSL-------SSNELTSIPLTFWNLKDIL----QLNFSSNFLTGPLPLEIGNLKVL 307
L L L S E + L +++++ QL+ +SN T L L+ NL +L
Sbjct: 196 RLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSN--TTFLGLKWTNLTML 253
Query: 308 IGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLE 342
D S NN + V L LEY FL YN ++
Sbjct: 254 ---DLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQ 285
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P SLE++ +Y ++D + Q + + +D + YL + L
Sbjct: 92 ------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLYQMLCG 138
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 21/156 (13%)
Query: 497 NNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFK-SFAVECEMMKSIRHRNLIKVI 554
+++G G F V A + VA+K + + S E ++ I+H N++ +
Sbjct: 23 RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 555 SSCSNEEFKALVLEYKPHGSL-----EKYLYSSNCILDIFQRLNIMIDVASALEYLH-FG 608
+ L+++ G L EK Y+ ++ V A++YLH G
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKYLHDLG 136
Query: 609 CLAPVIHCDLKPDNVL---LDDNLVAYLSDFGIAKL 641
++H DLKP+N+L LD++ +SDFG++K+
Sbjct: 137 ----IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 32/158 (20%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKS--FAV----ECEMMKSIRHRNLIK 552
+G G +GSV A G +VA+K + R F+S FA E ++K ++H N+I
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIK----KLSRPFQSEIFAKRAYRELLLLKHMQHENVIG 105
Query: 553 VI------SSCSNEEFKALVLEYKPHGSLEKYL---YSSNCILD-IFQRLNIMIDVASAL 602
++ SS N LV+ + L+K + +S I ++Q L L
Sbjct: 106 LLDVFTPASSLRNFYDFYLVMPFM-QTDLQKIMGMEFSEEKIQYLVYQMLK-------GL 157
Query: 603 EYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
+Y+H A V+H DLKP N+ ++++ + DFG+A+
Sbjct: 158 KYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR 192
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Query: 492 NGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRAFKSFAV-ECEMMKSIRHRN 549
+ F + + +G G G V+K + G+ +A K+ +L+ A ++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL-NIMIDVASALEYLHFG 608
++ + ++ ++ +E+ GSL++ L + I + Q L + I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREK 123
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643
++H D+KP N+L++ L DFG++ LI
Sbjct: 124 --HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Query: 492 NGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRAFKSFAV-ECEMMKSIRHRN 549
+ F + + +G G G V+K + G+ +A K+ +L+ A ++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL-NIMIDVASALEYLHFG 608
++ + ++ ++ +E+ GSL++ L + I + Q L + I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREK 123
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643
++H D+KP N+L++ L DFG++ LI
Sbjct: 124 --HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 593 NIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
I + + ALE+LH VIH D+KP NVL++ DFGI+ L+ +
Sbjct: 140 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDD 190
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Query: 492 NGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRAFKSFAV-ECEMMKSIRHRN 549
+ F + + +G G G V+K + G+ +A K+ +L+ A ++ + E +++
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL-NIMIDVASALEYLHFG 608
++ + ++ ++ +E+ GSL++ L + I + Q L + I V L YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREK 150
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643
++H D+KP N+L++ L DFG++ LI
Sbjct: 151 --HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 30/157 (19%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRAFKS--FAV----ECEMMKSIRHRNLIK 552
+G G +GSV A G +VA+K + R F+S FA E ++K ++H N+I
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIK----KLSRPFQSEIFAKRAYRELLLLKHMQHENVIG 87
Query: 553 VI------SSCSNEEFKALVLEYKPHGSLEKYL---YSSNCILDIFQRLNIMIDVASALE 603
++ SS N LV+ + L+K + +S I ++ + L+
Sbjct: 88 LLDVFTPASSLRNFYDFYLVMPFM-QTDLQKIMGLKFSEEKIQ------YLVYQMLKGLK 140
Query: 604 YLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
Y+H A V+H DLKP N+ ++++ + DFG+A+
Sbjct: 141 YIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 110/275 (40%), Gaps = 53/275 (19%)
Query: 83 SKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLS--SLSNCKSLTF 140
S+L+ L++ N+ S P L L+ LNL+ N ELS LS + + C +LT
Sbjct: 59 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN-------ELSQLSDKTFAFCTNLTE 111
Query: 141 IHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNG 200
+HL N + I + + N IT+DL N L+
Sbjct: 112 LHLMSNSIQKIKNNPFVKQ--------------------------KNLITLDLSHNGLSS 145
Query: 201 SIPITLSXXXXXXXXXXXXNKLEG--SIPDSICRLTELYELELGGNKLFGSIPACFSNLA 258
+ T NK++ S I + L +LEL N++ P CF +
Sbjct: 146 TKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIG 205
Query: 259 SLRILSL-------SSNELTSIPLTFWNLKDIL----QLNFSSNFLTGPLPLEIGNLKVL 307
L L L S E + L +++++ QL+ +SN T L L+ NL +L
Sbjct: 206 RLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSN--TTFLGLKWTNLTML 263
Query: 308 IGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLE 342
D S NN + V L LEY FL YN ++
Sbjct: 264 ---DLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQ 295
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P SLE++ +Y ++D + Q + + +D + YL + L
Sbjct: 92 ------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELD-HERMSYLLYQMLCG 138
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 136 KSLTFIHLSDN-----PLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSIT 190
K T +HLS+N L ++ T + L+ L ++ V G +P T
Sbjct: 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLN--LDRCELTKLQVDGTLPV-------LGT 81
Query: 191 IDLGGNKLNGSIPITLSXXXXXXXXXXXXNKLEGSIPDSICR-LTELYELELGGNKLFGS 249
+DL N+L S+P+ N+L S+P R L EL EL L GN+L
Sbjct: 82 LDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTL 139
Query: 250 IPACFSNLASLRILSLSSNELTSIPLTFWN 279
P + L LSL++N+LT +P N
Sbjct: 140 PPGLLTPTPKLEKLSLANNDLTELPAGLLN 169
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 23/157 (14%)
Query: 497 NNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFK-SFAVECEMMKSIRHRNLIKVI 554
+++G G F V A + VA+K + + S E ++ I+H N++ +
Sbjct: 23 RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 555 SSCSNEEFKALVLEYKPHGSL-----EKYLYSS-NCILDIFQRLNIMIDVASALEYLH-F 607
+ L+++ G L EK Y+ + IFQ L+ A++YLH
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD-------AVKYLHDL 135
Query: 608 GCLAPVIHCDLKPDNVL---LDDNLVAYLSDFGIAKL 641
G ++H DLKP+N+L LD++ +SDFG++K+
Sbjct: 136 G----IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 36/160 (22%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVF------NLQCGRAFKSFAVECEMMKSIRHRNLIK 552
IG G G V A G+ VAVK RA++ E ++K + H+N+I
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR----ELVLLKCVNHKNIIS 85
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFG 608
+++ + P +LE++ +Y ++D + Q +++ +D + YL +
Sbjct: 86 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIHMELD-HERMSYLLYQ 132
Query: 609 CL--------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
L A +IH DLKP N+++ + + DFG+A+
Sbjct: 133 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 172
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Query: 492 NGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRAFKSFAV-ECEMMKSIRHRN 549
+ F + + +G G G V+K + G+ +A K+ +L+ A ++ + E +++
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 550 LIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRL-NIMIDVASALEYLHFG 608
++ + ++ ++ +E+ GSL++ L + I + Q L + I V L YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREK 142
Query: 609 CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643
++H D+KP N+L++ L DFG++ LI
Sbjct: 143 --HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 175
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 30/176 (17%)
Query: 486 ELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVK-VFN-LQCGRAF---------KS 534
EL + ++ I G +G+V +G+ VA+K VFN + GR K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 535 FAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNI 594
E ++ H N++ + + + + ++ + YL + D+ Q ++
Sbjct: 76 VLREIRLLNHFHHPNILGL---------RDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD 126
Query: 595 MIDVASA--LEYLHFGCL--------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V S ++Y + L A V+H DL P N+LL DN + DF +A+
Sbjct: 127 QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 110/275 (40%), Gaps = 53/275 (19%)
Query: 83 SKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLS--SLSNCKSLTF 140
S+L+ L++ N+ S P L L+ LNL+ N ELS LS + + C +LT
Sbjct: 54 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN-------ELSQLSDKTFAFCTNLTE 106
Query: 141 IHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNG 200
+HL N + I + + N IT+DL N L+
Sbjct: 107 LHLMSNSIQKIKNNPFVKQ--------------------------KNLITLDLSHNGLSS 140
Query: 201 SIPITLSXXXXXXXXXXXXNKLEG--SIPDSICRLTELYELELGGNKLFGSIPACFSNLA 258
+ T NK++ S I + L +LEL N++ P CF +
Sbjct: 141 TKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIG 200
Query: 259 SLRILSL-------SSNELTSIPLTFWNLKDIL----QLNFSSNFLTGPLPLEIGNLKVL 307
L L L S E + L +++++ QL+ +SN T L L+ NL +L
Sbjct: 201 RLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSN--TTFLGLKWTNLTML 258
Query: 308 IGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLE 342
D S NN + V L LEY FL YN ++
Sbjct: 259 ---DLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQ 290
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 29/126 (23%)
Query: 527 QCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKY--LYSSNC 584
RA++ E +MK + H+N+I +++ + P SLE++ +Y
Sbjct: 66 HAKRAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVME 109
Query: 585 ILD--IFQRLNIMIDVASALEYLHFGCL--------APVIHCDLKPDNVLLDDNLVAYLS 634
++D + Q + + +D + YL + L A +IH DLKP N+++ + +
Sbjct: 110 LMDANLCQVIQMELD-HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
Query: 635 DFGIAK 640
DFG+A+
Sbjct: 169 DFGLAR 174
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 30/176 (17%)
Query: 486 ELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVK-VFN-LQCGRAF---------KS 534
EL + ++ I G +G+V +G+ VA+K VFN + GR K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 535 FAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNI 594
E ++ H N++ + + + + ++ + YL + D+ Q ++
Sbjct: 76 VLREIRLLNHFHHPNILGL---------RDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD 126
Query: 595 MIDVASA--LEYLHFGCL--------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
V S ++Y + L A V+H DL P N+LL DN + DF +A+
Sbjct: 127 QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 29/126 (23%)
Query: 527 QCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKY--LYSSNC 584
RA++ E +MK + H+N+I +++ + P SLE++ +Y
Sbjct: 68 HAKRAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVME 111
Query: 585 ILD--IFQRLNIMIDVASALEYLHFGCL--------APVIHCDLKPDNVLLDDNLVAYLS 634
++D + Q + + +D + YL + L A +IH DLKP N+++ + +
Sbjct: 112 LMDANLCQVIQMELD-HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 170
Query: 635 DFGIAK 640
DFG+A+
Sbjct: 171 DFGLAR 176
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 21/156 (13%)
Query: 497 NNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFK-SFAVECEMMKSIRHRNLIKVI 554
+++G G F V A + VA+K + + S E ++ I+H N++ +
Sbjct: 23 RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 555 SSCSNEEFKALVLEYKPHGSL-----EKYLYSSNCILDIFQRLNIMIDVASALEYLH-FG 608
+ L+++ G L EK Y+ ++ V A++YLH G
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKYLHDLG 136
Query: 609 CLAPVIHCDLKPDNVL---LDDNLVAYLSDFGIAKL 641
++H DLKP+N+L LD++ +SDFG++K+
Sbjct: 137 ----IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 21/156 (13%)
Query: 497 NNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFK-SFAVECEMMKSIRHRNLIKVI 554
+++G G F V A + VA+K + + S E ++ I+H N++ +
Sbjct: 23 RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 555 SSCSNEEFKALVLEYKPHGSL-----EKYLYSSNCILDIFQRLNIMIDVASALEYLH-FG 608
+ L+++ G L EK Y+ ++ V A++YLH G
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKYLHDLG 136
Query: 609 CLAPVIHCDLKPDNVL---LDDNLVAYLSDFGIAKL 641
++H DLKP+N+L LD++ +SDFG++K+
Sbjct: 137 ----IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P +LE++ +Y ++D + Q + + +D + YL + L
Sbjct: 92 ------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLCG 138
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 24/152 (15%)
Query: 500 IGRGGFGSVYKARLGDGME-VAVKVFNLQCGRAFKSFA-VECEMM--KSIRHRNLIKVIS 555
IG G FG R E VAVK R K A V+ E++ +S+RH N+++
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIE----RGEKIAANVKREIINHRSLRHPNIVRFKE 82
Query: 556 SCSNEEFKALVLEYKPHGSLEKYL-----YSSNCILDIFQRLNIMIDVASALEYLHFGCL 610
A+V+EY G L + + +S + FQ+L S + Y H
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYCH---A 133
Query: 611 APVIHCDLKPDNVLLDDNLVAYLS--DFGIAK 640
V H DLK +N LLD + L DFG +K
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 165
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 90
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P +LE++ +Y ++D + Q + + +D + YL + L
Sbjct: 91 ------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLCG 137
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 138 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P +LE++ +Y ++D + Q + + +D + YL + L
Sbjct: 93 ------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLCG 139
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P +LE++ +Y ++D + Q + + +D + YL + L
Sbjct: 93 ------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLCG 139
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 36/160 (22%)
Query: 500 IGRGGFGSVYKA-RLGDGMEVAVKVF------NLQCGRAFKSFAVECEMMKSIRHRNLIK 552
IG G G V A G+ VAVK RA++ E ++K + H+N+I
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR----ELVLLKCVNHKNIIS 87
Query: 553 VISSCSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFG 608
+++ + P +LE++ +Y ++D + Q +++ +D + YL +
Sbjct: 88 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIHMELD-HERMSYLLYQ 134
Query: 609 CL--------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
L A +IH DLKP N+++ + + DFG+A+
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P SLE++ +Y ++D + Q + + +D + YL + L
Sbjct: 93 ------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLYQMLCG 139
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P +LE++ +Y ++D + Q + + +D + YL + L
Sbjct: 85 ------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLCG 131
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 615 HCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE 645
H D+KP+N+L+ + AYL DFGIA E
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDE 187
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P +LE++ +Y ++D + Q + + +D + YL + L
Sbjct: 86 ------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLCG 132
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P SLE++ +Y ++D + Q + + +D + YL + L
Sbjct: 92 ------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLYQMLCG 138
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P +LE++ +Y ++D + Q + + +D + YL + L
Sbjct: 92 ------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLCG 138
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P +LE++ +Y ++D + Q + + +D + YL + L
Sbjct: 86 ------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLCG 132
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 26/159 (16%)
Query: 500 IGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS 558
IGRG +GSV K G +AVK +S E E + + +++ S C
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVK--------RIRSTVDEKEQKQLLMDLDVVMRSSDCP 81
Query: 559 N--EEFKALVLEYKPHGSLE----------KYLYSSNCILD--IFQRLNIMIDVASALEY 604
+ + AL E +E KY+YS +LD I + + I +A+
Sbjct: 82 YIVQFYGALFREGDCWICMELMSTSFDKFYKYVYS---VLDDVIPEEILGKITLATVKAL 138
Query: 605 LHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643
H +IH D+KP N+LLD + L DFGI+ L+
Sbjct: 139 NHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P SLE++ +Y ++D + Q + + +D + YL + L
Sbjct: 92 ------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLYQMLCG 138
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 467 PSNDANMPLVATWRTFSYLELCRATNGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN 525
P ND + +A + LE + + L+G GGFGSVY R+ D + VA+K +
Sbjct: 17 PCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK--H 69
Query: 526 LQCGRAFK--------SFAVECEMMKSIRH--RNLIKVISSCSNEEFKALVLEY-KPHGS 574
++ R +E ++K + +I+++ + L+LE +P
Sbjct: 70 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD 129
Query: 575 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAY-L 633
L ++ + + R + V A+ + H C V+H D+K +N+L+D N L
Sbjct: 130 LFDFITERGALQEELAR-SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKL 185
Query: 634 SDFGIAKLL 642
DFG LL
Sbjct: 186 IDFGSGALL 194
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 467 PSNDANMPLVATWRTFSYLELCRATNGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN 525
P ND + +A + LE + + L+G GGFGSVY R+ D + VA+K +
Sbjct: 16 PCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK--H 68
Query: 526 LQCGRAFK--------SFAVECEMMKSIRH--RNLIKVISSCSNEEFKALVLEY-KPHGS 574
++ R +E ++K + +I+++ + L+LE +P
Sbjct: 69 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD 128
Query: 575 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAY-L 633
L ++ + + R + V A+ + H C V+H D+K +N+L+D N L
Sbjct: 129 LFDFITERGALQEELAR-SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKL 184
Query: 634 SDFGIAKLL 642
DFG LL
Sbjct: 185 IDFGSGALL 193
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 467 PSNDANMPLVATWRTFSYLELCRATNGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN 525
P ND + +A + LE + + L+G GGFGSVY R+ D + VA+K +
Sbjct: 31 PCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK--H 83
Query: 526 LQCGRAFK--------SFAVECEMMKSIRH--RNLIKVISSCSNEEFKALVLEY-KPHGS 574
++ R +E ++K + +I+++ + L+LE +P
Sbjct: 84 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD 143
Query: 575 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAY-L 633
L ++ + + R + V A+ + H C V+H D+K +N+L+D N L
Sbjct: 144 LFDFITERGALQEELAR-SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKL 199
Query: 634 SDFGIAKLL 642
DFG LL
Sbjct: 200 IDFGSGALL 208
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P SLE++ +Y ++D + Q + + +D + YL + L
Sbjct: 92 ------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLYQMLCG 138
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 467 PSNDANMPLVATWRTFSYLELCRATNGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN 525
P ND + +A + LE + + L+G GGFGSVY R+ D + VA+K +
Sbjct: 17 PCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK--H 69
Query: 526 LQCGRAFK--------SFAVECEMMKSIRH--RNLIKVISSCSNEEFKALVLEY-KPHGS 574
++ R +E ++K + +I+++ + L+LE +P
Sbjct: 70 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD 129
Query: 575 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAY-L 633
L ++ + + R + V A+ + H C V+H D+K +N+L+D N L
Sbjct: 130 LFDFITERGALQEELAR-SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKL 185
Query: 634 SDFGIAKLL 642
DFG LL
Sbjct: 186 IDFGSGALL 194
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 500 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559
IG G FG R E+ + + + ++ E +S+RH N+++
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 560 EEFKALVLEYKPHGSLEKYL-----YSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614
A+V+EY G L + + +S + FQ+L S + Y H V
Sbjct: 86 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYCH---AMQVC 136
Query: 615 HCDLKPDNVLLDDNLVAYLS--DFGIAK 640
H DLK +N LLD + L DFG +K
Sbjct: 137 HRDLKLENTLLDGSPAPRLKICDFGYSK 164
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 96
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P SLE++ +Y ++D + Q + + +D + YL + L
Sbjct: 97 ------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLYQMLCG 143
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 144 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 179
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 500 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISS 556
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 557 CSNEEFKALVLEYKPHGSLEKY--LYSSNCILD--IFQRLNIMIDVASALEYLHFGCL-- 610
+ P +LE++ +Y ++D + Q + + +D + YL + L
Sbjct: 130 ------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLCG 176
Query: 611 ------APVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640
A +IH DLKP N+++ + + DFG+A+
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.138 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,425,736
Number of Sequences: 62578
Number of extensions: 672852
Number of successful extensions: 3905
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 505
Number of HSP's that attempted gapping in prelim test: 1740
Number of HSP's gapped (non-prelim): 1524
length of query: 646
length of database: 14,973,337
effective HSP length: 105
effective length of query: 541
effective length of database: 8,402,647
effective search space: 4545832027
effective search space used: 4545832027
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)