Query 046544
Match_columns 646
No_of_seqs 718 out of 4687
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 23:18:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046544.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046544hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.9E-55 6.4E-60 505.4 31.3 408 8-426 267-750 (768)
2 3rgz_A Protein brassinosteroid 100.0 2.8E-53 9.4E-58 487.4 28.4 407 2-417 216-721 (768)
3 3j0a_A TOLL-like receptor 5; m 100.0 5.9E-51 2E-55 472.8 31.7 411 3-418 41-565 (844)
4 3t6q_A CD180 antigen; protein- 100.0 2.3E-50 8E-55 452.2 33.4 412 3-419 50-566 (606)
5 3vq2_A TLR4, TOLL-like recepto 100.0 4.3E-50 1.5E-54 450.1 32.8 411 1-420 25-565 (606)
6 1ziw_A TOLL-like receptor 3; i 100.0 8.7E-49 3E-53 445.5 34.3 411 2-418 88-627 (680)
7 3t6q_A CD180 antigen; protein- 100.0 4.6E-48 1.6E-52 433.6 35.7 404 1-414 26-514 (606)
8 2z63_A TOLL-like receptor 4, v 100.0 3.3E-48 1.1E-52 431.6 31.4 411 1-420 21-538 (570)
9 4eco_A Uncharacterized protein 100.0 6.9E-49 2.4E-53 440.8 26.0 353 26-392 198-602 (636)
10 4eco_A Uncharacterized protein 100.0 8.2E-49 2.8E-53 440.2 24.8 396 10-415 81-602 (636)
11 4ecn_A Leucine-rich repeat pro 100.0 5.6E-48 1.9E-52 440.7 24.1 349 57-414 446-841 (876)
12 1ziw_A TOLL-like receptor 3; i 100.0 2E-46 6.9E-51 426.0 35.7 380 2-389 19-466 (680)
13 3vq2_A TLR4, TOLL-like recepto 100.0 6.9E-47 2.4E-51 424.1 30.3 389 3-396 49-564 (606)
14 3j0a_A TOLL-like receptor 5; m 100.0 6.6E-47 2.3E-51 438.8 28.9 408 1-416 18-542 (844)
15 4g8a_A TOLL-like receptor 4; l 100.0 8.4E-46 2.9E-50 417.4 35.0 412 1-420 45-587 (635)
16 2z81_A CD282 antigen, TOLL-lik 100.0 1.6E-46 5.6E-51 416.0 26.4 398 1-418 19-515 (549)
17 4ecn_A Leucine-rich repeat pro 100.0 3.2E-46 1.1E-50 426.3 28.1 380 26-420 440-873 (876)
18 2z63_A TOLL-like receptor 4, v 100.0 3.1E-45 1.1E-49 407.7 31.4 391 11-414 8-508 (570)
19 2z7x_B TOLL-like receptor 1, v 100.0 1.6E-45 5.5E-50 405.2 27.9 398 1-420 14-488 (520)
20 3v47_A TOLL-like receptor 5B a 100.0 5.3E-45 1.8E-49 394.2 26.4 374 14-396 14-414 (455)
21 2z81_A CD282 antigen, TOLL-lik 100.0 7E-45 2.4E-49 402.9 25.1 383 3-395 43-515 (549)
22 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3E-44 1E-48 398.5 30.1 182 234-420 331-517 (562)
23 3v47_A TOLL-like receptor 5B a 100.0 4.7E-44 1.6E-48 386.8 27.3 372 36-418 12-413 (455)
24 2z7x_B TOLL-like receptor 1, v 100.0 4E-44 1.4E-48 394.0 25.8 380 3-395 38-486 (520)
25 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.2E-42 4E-47 385.8 30.0 374 2-396 46-516 (562)
26 2id5_A Lingo-1, leucine rich r 100.0 1.1E-42 3.9E-47 378.2 27.2 347 37-418 14-361 (477)
27 4g8a_A TOLL-like receptor 4; l 100.0 1.6E-41 5.5E-46 382.5 31.6 389 3-395 69-585 (635)
28 1o6v_A Internalin A; bacterial 100.0 6.1E-41 2.1E-45 363.1 30.2 347 8-392 44-390 (466)
29 1jl5_A Outer protein YOPM; leu 100.0 5.4E-41 1.8E-45 360.7 24.6 356 1-414 25-410 (454)
30 2id5_A Lingo-1, leucine rich r 100.0 3.3E-40 1.1E-44 358.8 28.2 349 12-396 13-362 (477)
31 1o6v_A Internalin A; bacterial 100.0 1.5E-39 5.2E-44 352.1 31.3 333 2-372 61-393 (466)
32 3bz5_A Internalin-J, INLJ; leu 100.0 1.7E-39 5.7E-44 349.4 27.8 342 3-396 35-393 (457)
33 3o6n_A APL1; leucine-rich repe 100.0 1.5E-38 5.1E-43 336.4 24.8 336 58-418 44-379 (390)
34 3o6n_A APL1; leucine-rich repe 100.0 2E-38 6.8E-43 335.4 25.0 314 81-417 43-356 (390)
35 1jl5_A Outer protein YOPM; leu 100.0 3.8E-38 1.3E-42 338.5 23.9 348 8-414 9-371 (454)
36 3oja_B Anopheles plasmodium-re 100.0 5.5E-38 1.9E-42 350.2 25.5 337 32-418 49-385 (597)
37 3bz5_A Internalin-J, INLJ; leu 100.0 1.7E-37 5.8E-42 333.7 27.1 344 21-414 29-388 (457)
38 3oja_B Anopheles plasmodium-re 100.0 6.7E-38 2.3E-42 349.5 24.7 314 57-417 49-362 (597)
39 4fmz_A Internalin; leucine ric 100.0 4.3E-37 1.5E-41 319.9 27.1 307 30-390 40-346 (347)
40 4fmz_A Internalin; leucine ric 100.0 4.6E-37 1.6E-41 319.7 27.3 307 6-366 40-346 (347)
41 1ogq_A PGIP-2, polygalacturona 100.0 2.1E-37 7.2E-42 316.9 20.7 256 162-419 50-310 (313)
42 2ft3_A Biglycan; proteoglycan, 100.0 2.3E-35 8E-40 304.7 26.1 288 35-388 34-331 (332)
43 2ft3_A Biglycan; proteoglycan, 100.0 2E-35 6.8E-40 305.3 24.8 297 10-364 33-331 (332)
44 1xku_A Decorin; proteoglycan, 100.0 6.1E-35 2.1E-39 301.4 27.5 249 35-325 32-283 (330)
45 1xku_A Decorin; proteoglycan, 100.0 1.4E-34 4.7E-39 298.7 28.3 298 10-364 31-330 (330)
46 1z7x_W Ribonuclease inhibitor; 100.0 3.5E-38 1.2E-42 341.3 -6.7 359 10-392 3-413 (461)
47 1ogq_A PGIP-2, polygalacturona 100.0 1.1E-34 3.9E-39 296.6 17.4 188 178-391 117-305 (313)
48 1z7x_W Ribonuclease inhibitor; 100.0 3.1E-37 1.1E-41 333.8 -8.6 366 6-391 24-441 (461)
49 4asz_A BDNF/NT-3 growth factor 100.0 5.1E-34 1.7E-38 287.3 13.1 149 492-643 13-179 (299)
50 4fih_A Serine/threonine-protei 100.0 1.6E-33 5.5E-38 287.2 15.0 148 492-644 74-222 (346)
51 4b9d_A Serine/threonine-protei 100.0 2.5E-33 8.5E-38 286.2 16.3 149 492-643 24-176 (350)
52 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.7E-33 5.7E-38 282.7 14.2 148 492-643 32-183 (311)
53 4aoj_A High affinity nerve gro 100.0 2E-33 7E-38 286.8 14.6 149 492-643 41-209 (329)
54 4fie_A Serine/threonine-protei 100.0 7.9E-33 2.7E-37 289.0 16.9 148 492-644 151-299 (423)
55 3omv_A RAF proto-oncogene seri 100.0 8.3E-33 2.9E-37 278.4 15.3 146 492-643 36-183 (307)
56 2z80_A TOLL-like receptor 2, v 100.0 2.3E-32 7.9E-37 284.8 18.8 280 61-395 33-319 (353)
57 4gt4_A Tyrosine-protein kinase 100.0 8.6E-33 2.9E-37 279.5 13.8 148 493-643 27-196 (308)
58 3hyh_A Carbon catabolite-derep 100.0 3E-32 1E-36 269.9 16.3 148 491-643 12-163 (275)
59 2z66_A Variable lymphocyte rec 100.0 4.7E-32 1.6E-36 276.6 17.4 254 163-417 29-291 (306)
60 2z66_A Variable lymphocyte rec 100.0 8E-32 2.7E-36 274.9 18.8 212 184-396 76-293 (306)
61 3zyi_A Leucine-rich repeat-con 100.0 2E-31 6.8E-36 287.2 22.3 251 137-394 55-307 (452)
62 4g3f_A NF-kappa-beta-inducing 100.0 2.5E-32 8.7E-37 277.5 14.3 143 492-643 58-202 (336)
63 3zyj_A Leucine-rich repeat-con 100.0 2.2E-31 7.5E-36 285.9 22.2 251 137-394 44-296 (440)
64 2z80_A TOLL-like receptor 2, v 100.0 3.3E-32 1.1E-36 283.6 15.3 255 163-417 53-318 (353)
65 3zyi_A Leucine-rich repeat-con 100.0 4.8E-31 1.6E-35 284.3 24.0 248 108-366 55-303 (452)
66 3ubd_A Ribosomal protein S6 ki 100.0 9.7E-33 3.3E-37 277.2 9.2 148 492-643 24-177 (304)
67 3zyj_A Leucine-rich repeat-con 100.0 7.1E-31 2.4E-35 281.9 23.8 249 107-366 43-292 (440)
68 3fpq_A Serine/threonine-protei 100.0 1E-31 3.6E-36 268.4 15.3 145 495-643 29-183 (290)
69 4g31_A Eukaryotic translation 100.0 9.4E-32 3.2E-36 271.2 14.2 149 492-643 5-169 (299)
70 1ozn_A Reticulon 4 receptor; N 100.0 2.9E-31 9.8E-36 267.9 16.3 251 139-417 14-265 (285)
71 3hmm_A TGF-beta receptor type- 100.0 3.7E-31 1.3E-35 268.1 14.6 148 492-643 3-159 (303)
72 1ozn_A Reticulon 4 receptor; N 100.0 1.3E-30 4.5E-35 263.0 18.3 254 109-396 13-267 (285)
73 4fcg_A Uncharacterized protein 100.0 2.1E-30 7.3E-35 266.5 19.1 226 162-391 81-315 (328)
74 3g06_A SSPH2 (leucine-rich rep 100.0 2E-29 6.7E-34 278.9 26.0 268 35-377 41-308 (622)
75 3g06_A SSPH2 (leucine-rich rep 100.0 2.7E-29 9.1E-34 277.9 26.7 269 10-353 40-308 (622)
76 4ase_A Vascular endothelial gr 100.0 7.3E-31 2.5E-35 270.1 12.4 158 484-644 56-237 (353)
77 3o53_A Protein LRIM1, AGAP0063 100.0 3.6E-32 1.2E-36 278.7 0.5 266 63-372 14-282 (317)
78 4fcg_A Uncharacterized protein 100.0 1.2E-29 4E-34 261.0 19.2 185 180-366 121-314 (328)
79 3o53_A Protein LRIM1, AGAP0063 100.0 9.1E-32 3.1E-36 275.8 2.5 236 58-313 33-270 (317)
80 4b99_A Mitogen-activated prote 100.0 1.6E-29 5.4E-34 264.8 14.5 147 492-643 54-209 (398)
81 1wwl_A Monocyte differentiatio 100.0 8.5E-31 2.9E-35 267.9 3.7 202 184-391 93-310 (312)
82 1wwl_A Monocyte differentiatio 100.0 3.8E-30 1.3E-34 263.1 7.8 246 58-318 42-309 (312)
83 3v5w_A G-protein coupled recep 100.0 6.4E-29 2.2E-33 271.1 16.4 149 492-644 189-344 (689)
84 3ogk_B Coronatine-insensitive 100.0 9.2E-32 3.1E-36 300.4 -6.4 400 6-411 69-524 (592)
85 4f9c_A Cell division cycle 7-r 100.0 5.2E-29 1.8E-33 258.0 14.7 147 488-643 17-169 (361)
86 3uto_A Twitchin; kinase, muscl 100.0 8.5E-29 2.9E-33 272.1 16.4 150 492-644 157-309 (573)
87 3oja_A Leucine-rich immune mol 100.0 5.3E-29 1.8E-33 270.0 12.2 242 163-418 35-287 (487)
88 2z62_A TOLL-like receptor 4, v 100.0 4.1E-28 1.4E-32 243.5 16.4 209 187-396 29-243 (276)
89 3oja_A Leucine-rich immune mol 100.0 9.4E-29 3.2E-33 268.0 12.6 222 184-417 32-254 (487)
90 3ogk_B Coronatine-insensitive 100.0 3.5E-31 1.2E-35 295.7 -7.1 375 8-391 110-527 (592)
91 1p9a_G Platelet glycoprotein I 100.0 2E-27 6.7E-32 239.8 18.8 205 181-391 5-209 (290)
92 1p9a_G Platelet glycoprotein I 99.9 4.4E-27 1.5E-31 237.3 20.0 210 205-419 5-214 (290)
93 2z62_A TOLL-like receptor 4, v 99.9 3E-27 1E-31 237.2 18.0 205 163-368 29-239 (276)
94 2o6q_A Variable lymphocyte rec 99.9 9.8E-27 3.4E-31 232.6 21.1 205 187-394 17-222 (270)
95 4aw2_A Serine/threonine-protei 99.9 4.9E-28 1.7E-32 257.6 10.3 157 484-643 66-226 (437)
96 2o6q_A Variable lymphocyte rec 99.9 1.7E-26 6E-31 230.8 20.6 206 210-418 16-223 (270)
97 3s95_A LIMK-1, LIM domain kina 99.9 1.5E-26 5E-31 236.4 17.3 149 492-643 10-159 (310)
98 3fxz_A Serine/threonine-protei 99.9 2.6E-26 8.9E-31 232.9 18.0 147 492-643 20-167 (297)
99 3fe3_A MAP/microtubule affinit 99.9 1.7E-26 5.8E-31 237.3 16.0 149 491-643 14-165 (328)
100 2c30_A Serine/threonine-protei 99.9 4.6E-26 1.6E-30 233.7 17.8 159 480-643 23-192 (321)
101 2vd5_A DMPK protein; serine/th 99.9 9.1E-27 3.1E-31 246.0 12.7 157 484-643 53-213 (412)
102 2qkw_B Protein kinase; three-h 99.9 1.1E-26 3.8E-31 238.5 12.4 156 484-642 31-189 (321)
103 3zgw_A Maternal embryonic leuc 99.9 3E-26 1E-30 236.9 15.4 150 490-643 8-159 (347)
104 3kul_A Ephrin type-A receptor 99.9 3.5E-26 1.2E-30 235.0 15.2 149 492-643 49-202 (325)
105 1o6l_A RAC-beta serine/threoni 99.9 3.8E-26 1.3E-30 235.4 15.2 147 492-642 5-155 (337)
106 3v8s_A RHO-associated protein 99.9 1.8E-26 6.3E-31 243.5 12.9 154 485-643 62-219 (410)
107 3txo_A PKC-L, NPKC-ETA, protei 99.9 4.6E-26 1.6E-30 236.3 15.0 148 491-642 22-174 (353)
108 4hcu_A Tyrosine-protein kinase 99.9 6.6E-26 2.3E-30 226.5 15.6 148 492-643 10-157 (269)
109 1tki_A Titin; serine kinase, m 99.9 1E-25 3.5E-30 231.0 17.3 149 491-643 4-155 (321)
110 2qol_A Ephrin receptor; recept 99.9 3.2E-26 1.1E-30 239.7 13.6 149 492-643 45-198 (373)
111 2psq_A Fibroblast growth facto 99.9 6.2E-26 2.1E-30 237.3 15.7 149 492-643 81-254 (370)
112 3uim_A Brassinosteroid insensi 99.9 3.6E-26 1.2E-30 235.2 13.4 166 478-643 16-185 (326)
113 1fot_A TPK1 delta, CAMP-depend 99.9 9.7E-26 3.3E-30 230.6 16.3 148 492-643 6-157 (318)
114 2xwt_C Thyrotropin receptor; s 99.9 7.4E-26 2.5E-30 221.9 14.5 196 187-387 32-236 (239)
115 3rfs_A Internalin B, repeat mo 99.9 6.5E-26 2.2E-30 226.8 14.3 227 85-378 21-247 (272)
116 3sxs_A Cytoplasmic tyrosine-pr 99.9 9E-26 3.1E-30 225.4 15.2 149 491-643 7-155 (268)
117 3niz_A Rhodanese family protei 99.9 1.1E-25 3.8E-30 229.8 15.8 148 492-643 21-170 (311)
118 2yab_A Death-associated protei 99.9 1.9E-25 6.3E-30 232.4 17.5 149 491-643 11-170 (361)
119 1xjd_A Protein kinase C, theta 99.9 9.6E-26 3.3E-30 233.0 15.0 151 488-642 13-168 (345)
120 3qd2_B Eukaryotic translation 99.9 1.5E-25 5.3E-30 230.9 16.4 151 491-644 5-216 (332)
121 3cbl_A C-FES, proto-oncogene t 99.9 3.4E-26 1.2E-30 240.2 11.6 150 491-643 113-264 (377)
122 4fr4_A YANK1, serine/threonine 99.9 9.8E-26 3.3E-30 235.9 15.1 148 492-643 15-166 (384)
123 3ugc_A Tyrosine-protein kinase 99.9 3.4E-26 1.2E-30 231.8 11.3 149 492-643 10-165 (295)
124 4eqm_A Protein kinase; transfe 99.9 1.2E-25 4.2E-30 227.6 15.2 148 492-643 11-162 (294)
125 4dc2_A Protein kinase C IOTA t 99.9 8.8E-26 3E-30 237.0 14.5 147 492-642 52-203 (396)
126 3rfs_A Internalin B, repeat mo 99.9 1.3E-25 4.6E-30 224.5 15.2 205 181-396 36-241 (272)
127 1kob_A Twitchin; kinase, intra 99.9 1.8E-25 6.1E-30 234.6 16.8 150 492-644 51-203 (387)
128 3a8x_A Protein kinase C IOTA t 99.9 1.5E-25 5E-30 232.0 15.4 147 492-642 9-160 (345)
129 1rdq_E PKA C-alpha, CAMP-depen 99.9 1.5E-25 5.2E-30 232.3 15.3 148 492-643 41-192 (350)
130 3gen_A Tyrosine-protein kinase 99.9 1.4E-25 4.7E-30 225.9 14.6 149 491-643 23-171 (283)
131 3tki_A Serine/threonine-protei 99.9 1.1E-25 3.9E-30 231.0 13.9 148 491-642 6-155 (323)
132 3o0g_A Cell division protein k 99.9 3.6E-25 1.2E-29 224.0 17.1 148 492-643 2-152 (292)
133 3a62_A Ribosomal protein S6 ki 99.9 1.4E-25 4.9E-30 230.7 14.3 147 492-642 17-171 (327)
134 3goz_A Leucine-rich repeat-con 99.9 6E-27 2.1E-31 244.5 3.7 112 235-346 168-301 (362)
135 1ob3_A PFPK5, cell division co 99.9 1.5E-25 5.2E-30 226.2 13.8 147 492-642 2-150 (288)
136 2p1m_B Transport inhibitor res 99.9 3.3E-28 1.1E-32 271.7 -6.9 378 6-391 62-520 (594)
137 2nru_A Interleukin-1 receptor- 99.9 9.2E-25 3.2E-29 222.6 19.1 161 479-643 12-184 (307)
138 2i0e_A Protein kinase C-beta I 99.9 2.3E-25 8E-30 230.9 14.7 149 490-642 18-171 (353)
139 3p86_A Serine/threonine-protei 99.9 2.1E-25 7.2E-30 227.4 14.1 148 491-642 36-189 (309)
140 4glp_A Monocyte differentiatio 99.9 1.5E-25 5.1E-30 228.8 12.8 200 186-391 91-308 (310)
141 1h6u_A Internalin H; cell adhe 99.9 5E-25 1.7E-29 224.4 16.6 193 184-391 39-231 (308)
142 2x4f_A Myosin light chain kina 99.9 2.7E-25 9.1E-30 232.6 14.9 146 495-643 92-240 (373)
143 2p1m_B Transport inhibitor res 99.9 1.2E-27 4.2E-32 267.1 -3.1 393 13-412 46-518 (594)
144 2y0a_A Death-associated protei 99.9 6.9E-25 2.4E-29 225.4 17.5 148 492-643 11-169 (326)
145 2zv2_A Calcium/calmodulin-depe 99.9 2.8E-25 9.6E-30 225.5 14.3 148 491-643 12-188 (298)
146 3soa_A Calcium/calmodulin-depe 99.9 4.1E-25 1.4E-29 235.9 16.3 151 490-644 9-165 (444)
147 2bdw_A Hypothetical protein K1 99.9 4.3E-25 1.5E-29 230.2 16.0 149 491-643 28-182 (362)
148 4ay9_X Follicle-stimulating ho 99.9 5.6E-25 1.9E-29 228.4 16.8 241 62-364 12-257 (350)
149 3soc_A Activin receptor type-2 99.9 2.6E-25 9E-30 228.3 14.1 145 492-643 24-182 (322)
150 2y94_A 5'-AMP-activated protei 99.9 4.1E-25 1.4E-29 237.5 15.9 148 492-643 16-167 (476)
151 3h4j_B AMPK kdaid, SNF1-like p 99.9 2.5E-25 8.4E-30 229.1 13.3 148 491-643 8-159 (336)
152 4euu_A Serine/threonine-protei 99.9 4.8E-25 1.7E-29 226.0 15.2 150 492-644 9-168 (319)
153 4fvq_A Tyrosine-protein kinase 99.9 3.1E-25 1.1E-29 224.0 13.5 149 492-643 8-172 (289)
154 2acx_A G protein-coupled recep 99.9 5.3E-25 1.8E-29 239.9 16.0 149 492-643 184-337 (576)
155 2xwt_C Thyrotropin receptor; s 99.9 9.9E-25 3.4E-29 213.8 16.5 197 162-364 31-237 (239)
156 3t9t_A Tyrosine-protein kinase 99.9 5.9E-25 2E-29 219.2 14.8 147 492-642 8-154 (267)
157 2pmi_A Negative RE, cyclin-dep 99.9 5.8E-25 2E-29 225.2 15.0 149 491-643 4-159 (317)
158 4e5w_A Tyrosine-protein kinase 99.9 5.7E-25 2E-29 223.6 14.8 149 492-643 21-177 (302)
159 3c0i_A Peripheral plasma membr 99.9 3.6E-25 1.2E-29 230.0 13.6 149 492-643 24-184 (351)
160 3vhe_A Vascular endothelial gr 99.9 2E-25 7E-30 232.8 11.8 160 481-643 11-244 (359)
161 3f3z_A Calcium/calmodulin-depe 99.9 8.1E-25 2.8E-29 219.5 15.6 149 491-643 8-160 (277)
162 2izr_A Casein kinase I isoform 99.9 5.7E-25 1.9E-29 226.6 14.9 146 492-643 9-161 (330)
163 3uc3_A Serine/threonine-protei 99.9 6.8E-25 2.3E-29 228.7 15.6 147 491-642 19-168 (361)
164 1opk_A P150, C-ABL, proto-onco 99.9 4.1E-25 1.4E-29 240.1 14.5 149 492-644 220-370 (495)
165 2r5t_A Serine/threonine-protei 99.9 3.1E-25 1.1E-29 231.6 13.0 147 492-642 38-189 (373)
166 1luf_A Muscle-specific tyrosin 99.9 3.4E-25 1.1E-29 229.6 13.2 152 488-642 43-224 (343)
167 3tt0_A Basic fibroblast growth 99.9 5.4E-25 1.9E-29 231.5 14.9 149 492-643 69-242 (382)
168 3e7e_A HBUB1, BUB1A, mitotic c 99.9 3.8E-25 1.3E-29 231.3 13.0 146 491-642 64-233 (365)
169 1qcf_A Haematopoetic cell kina 99.9 3.8E-25 1.3E-29 238.0 13.1 148 491-643 187-335 (454)
170 3gni_B Strad alpha; kinase fol 99.9 1E-24 3.5E-29 230.1 16.1 149 491-642 24-178 (389)
171 3lxl_A Tyrosine-protein kinase 99.9 5.9E-25 2E-29 226.2 13.9 149 492-643 23-178 (327)
172 2ivs_A Proto-oncogene tyrosine 99.9 7.8E-25 2.7E-29 223.8 14.3 150 491-643 22-201 (314)
173 4glp_A Monocyte differentiatio 99.9 9.7E-25 3.3E-29 222.7 14.8 201 162-367 91-308 (310)
174 3ork_A Serine/threonine protei 99.9 2.3E-25 7.9E-30 227.5 10.2 149 491-643 11-167 (311)
175 1k9a_A Carboxyl-terminal SRC k 99.9 9.9E-25 3.4E-29 234.3 15.5 146 491-642 192-339 (450)
176 3c4z_A Rhodopsin kinase; Ser/T 99.9 1.1E-24 3.9E-29 236.7 16.1 149 492-643 185-340 (543)
177 4ejn_A RAC-alpha serine/threon 99.9 2.9E-25 9.8E-30 238.5 11.2 147 492-642 148-299 (446)
178 3goz_A Leucine-rich repeat-con 99.9 3.9E-26 1.3E-30 238.4 4.0 213 180-392 44-299 (362)
179 3p1a_A MYT1 kinase, membrane-a 99.9 7.6E-25 2.6E-29 223.7 13.5 148 492-643 57-208 (311)
180 1rjb_A FL cytokine receptor; k 99.9 1.1E-24 3.6E-29 226.0 14.7 151 490-643 43-223 (344)
181 3cok_A Serine/threonine-protei 99.9 1.4E-24 4.7E-29 218.0 15.0 150 491-643 10-163 (278)
182 2w1i_A JAK2; chromosomal rearr 99.9 1.3E-24 4.3E-29 223.6 15.0 149 492-643 41-196 (326)
183 1mp8_A Focal adhesion kinase 1 99.9 7.1E-25 2.4E-29 220.5 12.8 149 491-643 14-167 (281)
184 3rp9_A Mitogen-activated prote 99.9 7.5E-25 2.6E-29 236.2 13.6 147 492-643 53-207 (458)
185 3l9p_A Anaplastic lymphoma kin 99.9 5.1E-25 1.7E-29 230.2 11.8 148 492-642 71-234 (367)
186 2w4o_A Calcium/calmodulin-depe 99.9 1.2E-24 4.2E-29 225.7 14.2 147 491-643 52-202 (349)
187 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 6E-25 2E-29 236.2 12.2 148 491-643 183-331 (452)
188 4agu_A Cyclin-dependent kinase 99.9 2.3E-24 7.7E-29 220.2 15.9 148 492-643 3-153 (311)
189 3qup_A Tyrosine-protein kinase 99.9 7.5E-25 2.6E-29 225.0 12.4 151 490-643 21-188 (323)
190 2vuw_A Serine/threonine-protei 99.9 5.2E-26 1.8E-30 235.0 3.7 148 491-643 19-233 (336)
191 1u5q_A Serine/threonine protei 99.9 1.3E-24 4.6E-29 225.1 14.3 148 492-643 54-205 (348)
192 1t46_A HOMO sapiens V-KIT hard 99.9 1.4E-24 4.6E-29 221.9 14.0 151 491-644 22-197 (313)
193 2ac3_A MAP kinase-interacting 99.9 2.3E-24 7.9E-29 220.6 15.7 147 492-642 12-164 (316)
194 2pvf_A Fibroblast growth facto 99.9 1.7E-24 5.9E-29 223.4 14.9 150 491-643 34-208 (334)
195 3is5_A Calcium-dependent prote 99.9 1.5E-24 5.2E-29 218.5 13.9 149 492-643 22-178 (285)
196 2j7t_A Serine/threonine-protei 99.9 1.3E-24 4.5E-29 220.9 13.6 148 491-641 18-166 (302)
197 3dls_A PAS domain-containing s 99.9 9E-25 3.1E-29 225.4 12.3 150 490-643 22-181 (335)
198 1x8b_A WEE1HU, WEE1-like prote 99.9 2.7E-24 9.2E-29 216.8 15.6 150 491-643 10-185 (289)
199 2ca6_A RAN GTPase-activating p 99.9 1.5E-26 5E-31 244.0 -1.2 93 301-393 212-319 (386)
200 3q4u_A Activin receptor type-1 99.9 2.6E-24 8.9E-29 218.5 15.4 147 491-643 7-164 (301)
201 1qpc_A LCK kinase; alpha beta 99.9 8E-25 2.7E-29 219.8 11.5 148 491-643 12-160 (279)
202 2a2a_A Death-associated protei 99.9 2.7E-24 9.1E-29 220.7 15.5 148 492-643 12-170 (321)
203 2eue_A Carbon catabolite derep 99.9 2.7E-24 9.4E-29 215.4 15.3 147 492-643 13-163 (275)
204 1mqb_A Ephrin type-A receptor 99.9 1.8E-24 6.1E-29 223.1 14.3 149 492-643 44-198 (333)
205 3kn6_A Ribosomal protein S6 ki 99.9 4.3E-24 1.5E-28 219.3 17.1 140 497-643 16-160 (325)
206 3n9x_A Phosphotransferase; mal 99.9 1.9E-24 6.6E-29 230.9 14.9 148 491-643 25-180 (432)
207 3poz_A Epidermal growth factor 99.9 1.1E-24 3.6E-29 224.2 12.3 148 492-643 15-168 (327)
208 3kfa_A Tyrosine-protein kinase 99.9 6E-25 2.1E-29 221.8 10.3 151 490-644 11-163 (288)
209 4eut_A Serine/threonine-protei 99.9 1.2E-24 4.1E-29 229.9 13.0 149 492-643 9-167 (396)
210 2rku_A Serine/threonine-protei 99.9 3.7E-24 1.3E-28 216.7 16.0 148 492-643 15-166 (294)
211 2ast_B S-phase kinase-associat 99.9 1.4E-25 4.8E-30 231.8 5.6 253 12-302 49-314 (336)
212 3m19_A Variable lymphocyte rec 99.9 6.9E-24 2.3E-28 209.5 17.5 178 188-391 16-193 (251)
213 2buj_A Serine/threonine-protei 99.9 2.2E-24 7.7E-29 220.8 14.4 148 492-642 29-184 (317)
214 3fdn_A Serine/threonine-protei 99.9 2E-24 6.8E-29 216.9 13.7 148 491-642 8-159 (279)
215 2owb_A Serine/threonine-protei 99.9 3.3E-24 1.1E-28 221.3 15.6 148 492-643 41-192 (335)
216 4f0f_A Serine/threonine-protei 99.9 4.1E-24 1.4E-28 215.6 15.8 147 492-643 19-180 (287)
217 1ua2_A CAK, cell division prot 99.9 1.5E-24 5.1E-29 225.0 12.8 152 488-643 6-163 (346)
218 3kk8_A Calcium/calmodulin depe 99.9 5.1E-24 1.7E-28 214.5 16.1 149 491-643 5-159 (284)
219 3kex_A Receptor tyrosine-prote 99.9 1E-24 3.4E-29 224.3 11.1 148 492-643 13-166 (325)
220 3m19_A Variable lymphocyte rec 99.9 7.5E-24 2.6E-28 209.2 16.9 180 236-418 16-198 (251)
221 1p4o_A Insulin-like growth fac 99.9 5.7E-25 1.9E-29 225.8 9.1 153 487-642 20-188 (322)
222 3mtl_A Cell division protein k 99.9 1E-24 3.5E-29 224.1 11.0 148 492-643 2-151 (324)
223 1u59_A Tyrosine-protein kinase 99.9 3.8E-24 1.3E-28 215.9 14.9 148 492-643 9-161 (287)
224 3pg1_A Mitogen-activated prote 99.9 2.6E-24 8.8E-29 224.8 14.1 157 482-642 12-184 (362)
225 2h8h_A Proto-oncogene tyrosine 99.9 1.2E-24 4.1E-29 238.6 12.0 148 491-643 266-414 (535)
226 2ozo_A Tyrosine-protein kinase 99.9 2.4E-24 8.2E-29 239.6 14.6 141 499-643 343-487 (613)
227 3hko_A Calcium/calmodulin-depe 99.9 2E-24 6.9E-29 224.0 12.9 152 488-642 22-220 (345)
228 3c1x_A Hepatocyte growth facto 99.9 1.4E-24 4.7E-29 227.1 11.5 148 493-643 90-243 (373)
229 2qr7_A Ribosomal protein S6 ki 99.9 3.9E-24 1.3E-28 221.0 14.8 145 491-643 21-171 (342)
230 3f66_A Hepatocyte growth facto 99.9 2.3E-24 7.7E-29 218.7 12.7 149 492-643 25-179 (298)
231 3lb7_A RAF proto-oncogene seri 99.9 4.1E-24 1.4E-28 217.7 14.6 145 492-642 36-182 (307)
232 2y7j_A Phosphorylase B kinase 99.9 5.5E-24 1.9E-28 222.2 15.8 155 485-643 87-251 (365)
233 1vzo_A Ribosomal protein S6 ki 99.9 8.5E-25 2.9E-29 227.5 9.6 147 492-642 54-209 (355)
234 1csn_A Casein kinase-1; phosph 99.9 9.4E-24 3.2E-28 214.1 17.1 146 492-643 10-162 (298)
235 2h6d_A 5'-AMP-activated protei 99.9 4.4E-24 1.5E-28 214.0 14.4 149 491-643 10-162 (276)
236 3bhy_A Death-associated protei 99.9 6.6E-24 2.2E-28 213.6 15.7 148 492-643 5-163 (283)
237 2clq_A Mitogen-activated prote 99.9 1E-23 3.6E-28 213.4 17.2 149 492-643 22-174 (295)
238 2yex_A Serine/threonine-protei 99.9 4.4E-24 1.5E-28 214.0 14.2 148 491-642 6-155 (276)
239 1zy4_A Serine/threonine-protei 99.9 3.1E-24 1E-28 218.0 13.0 149 491-643 5-167 (303)
240 3q5i_A Protein kinase; CDPK, m 99.9 7.4E-24 2.5E-28 231.1 16.9 149 491-643 35-200 (504)
241 1phk_A Phosphorylase kinase; g 99.9 8.2E-24 2.8E-28 214.6 16.1 150 490-643 15-175 (298)
242 3pfq_A PKC-B, PKC-beta, protei 99.9 4.2E-24 1.4E-28 239.9 15.3 149 490-642 339-492 (674)
243 3lxp_A Non-receptor tyrosine-p 99.9 8.6E-24 2.9E-28 216.6 16.4 145 494-643 33-185 (318)
244 3a7i_A MST3 kinase, serine/thr 99.9 1.1E-23 3.7E-28 214.3 16.9 147 492-643 22-170 (303)
245 3mdy_A Bone morphogenetic prot 99.9 9.6E-24 3.3E-28 218.0 16.8 146 489-643 34-193 (337)
246 1h6u_A Internalin H; cell adhe 99.9 1.5E-23 5E-28 213.5 17.8 192 164-371 43-234 (308)
247 3llt_A Serine/threonine kinase 99.9 3.4E-24 1.2E-28 223.7 13.3 159 480-643 23-213 (360)
248 3op5_A Serine/threonine-protei 99.9 2E-24 6.9E-29 225.7 11.6 149 491-643 34-205 (364)
249 3oz6_A Mitogen-activated prote 99.9 6.2E-24 2.1E-28 224.0 15.5 147 490-642 7-159 (388)
250 3dbq_A Dual specificity protei 99.9 4.9E-24 1.7E-28 220.8 14.4 147 491-643 8-158 (343)
251 2vgo_A Serine/threonine-protei 99.9 6.7E-24 2.3E-28 213.7 15.0 147 492-642 14-164 (284)
252 3dtc_A Mitogen-activated prote 99.9 4.5E-24 1.6E-28 213.3 13.6 146 492-643 7-167 (271)
253 3lij_A Calcium/calmodulin depe 99.9 4.9E-24 1.7E-28 231.9 15.0 148 492-643 37-190 (494)
254 3nyv_A Calmodulin-domain prote 99.9 4.7E-24 1.6E-28 231.7 14.6 148 492-643 26-180 (484)
255 3com_A Serine/threonine-protei 99.9 9.1E-24 3.1E-28 216.0 16.0 149 490-643 27-176 (314)
256 3g33_A Cell division protein k 99.9 1.1E-23 3.7E-28 214.8 16.4 150 490-643 7-171 (308)
257 3i6u_A CDS1, serine/threonine- 99.9 3.5E-24 1.2E-28 227.9 13.2 150 489-643 132-293 (419)
258 2jam_A Calcium/calmodulin-depe 99.9 4.6E-24 1.6E-28 217.1 13.6 148 491-642 8-159 (304)
259 3mi9_A Cell division protein k 99.9 6.4E-24 2.2E-28 220.7 14.9 149 491-643 16-175 (351)
260 3pls_A Macrophage-stimulating 99.9 4.7E-24 1.6E-28 216.3 13.5 147 493-642 22-174 (298)
261 2i1m_A Macrophage colony-stimu 99.9 2.1E-24 7.1E-29 222.7 11.1 152 489-643 43-215 (333)
262 3kmu_A ILK, integrin-linked ki 99.9 6.8E-24 2.3E-28 211.8 14.5 147 492-642 10-163 (271)
263 3mwu_A Calmodulin-domain prote 99.9 5.2E-24 1.8E-28 231.3 14.7 148 492-643 22-175 (486)
264 2wqm_A Serine/threonine-protei 99.9 5.9E-24 2E-28 217.0 14.1 149 492-643 32-187 (310)
265 2h34_A Serine/threonine-protei 99.9 5.8E-24 2E-28 216.9 14.0 151 489-643 31-185 (309)
266 2xir_A Vascular endothelial gr 99.9 3E-24 1E-28 219.7 11.8 159 482-643 17-199 (316)
267 4aaa_A Cyclin-dependent kinase 99.9 6.9E-24 2.4E-28 218.6 14.6 148 492-643 25-175 (331)
268 3eqc_A Dual specificity mitoge 99.9 4E-24 1.4E-28 223.1 12.8 147 492-642 33-182 (360)
269 3gbz_A Kinase, CMGC CDK; ssgci 99.9 3.5E-24 1.2E-28 220.6 12.0 150 489-643 31-188 (329)
270 3cc6_A Protein tyrosine kinase 99.9 4.9E-24 1.7E-28 214.3 12.7 149 491-643 11-164 (281)
271 4ay9_X Follicle-stimulating ho 99.9 1.3E-23 4.4E-28 218.2 16.2 182 163-345 31-218 (350)
272 3og7_A AKAP9-BRAF fusion prote 99.9 4.9E-24 1.7E-28 215.3 12.7 146 491-642 23-170 (289)
273 1nxk_A MAP kinase-activated pr 99.9 8.1E-24 2.8E-28 223.5 14.8 144 492-643 61-215 (400)
274 1fvr_A Tyrosine-protein kinase 99.9 9E-24 3.1E-28 217.3 14.8 147 492-641 25-191 (327)
275 2zmd_A Dual specificity protei 99.9 8.3E-24 2.8E-28 222.8 14.8 146 492-643 56-205 (390)
276 2a19_B Interferon-induced, dou 99.9 6.9E-24 2.4E-28 213.4 13.4 146 491-643 10-173 (284)
277 3eb0_A Putative uncharacterize 99.9 1.2E-23 4.1E-28 221.3 15.6 147 489-643 4-193 (383)
278 3brb_A Proto-oncogene tyrosine 99.9 7E-24 2.4E-28 216.7 13.3 152 489-643 31-198 (313)
279 3ttj_A Mitogen-activated prote 99.9 5.5E-24 1.9E-28 229.0 13.1 146 491-643 61-215 (464)
280 1cm8_A Phosphorylated MAP kina 99.9 5E-24 1.7E-28 222.6 12.3 147 491-643 24-179 (367)
281 3lzb_A Epidermal growth factor 99.9 5.2E-24 1.8E-28 219.0 12.3 148 492-643 15-168 (327)
282 2vwi_A Serine/threonine-protei 99.9 3.1E-24 1.1E-28 218.2 10.4 151 489-642 12-171 (303)
283 2pml_X PFPK7, Ser/Thr protein 99.9 3.5E-24 1.2E-28 222.4 11.0 149 491-643 30-203 (348)
284 3uqc_A Probable conserved tran 99.9 1.1E-23 3.8E-28 212.1 14.3 143 492-640 31-177 (286)
285 2ca6_A RAN GTPase-activating p 99.9 2E-25 6.7E-30 235.3 1.5 238 178-415 24-318 (386)
286 3byv_A Rhoptry kinase; malaria 99.9 1.4E-24 4.9E-29 227.9 7.8 148 491-642 72-256 (377)
287 2ast_B S-phase kinase-associat 99.9 6.3E-25 2.2E-29 226.9 5.0 230 162-396 70-312 (336)
288 1xbb_A Tyrosine-protein kinase 99.9 1.3E-23 4.3E-28 212.5 14.5 147 492-643 16-168 (291)
289 2ycf_A Serine/threonine-protei 99.9 1.2E-23 4E-28 216.0 14.1 148 491-643 9-168 (322)
290 3g2f_A Bone morphogenetic prot 99.9 1.7E-23 5.9E-28 216.0 15.4 144 491-643 12-171 (336)
291 2eva_A TAK1 kinase - TAB1 chim 99.9 1.2E-23 4.1E-28 214.3 13.8 146 492-642 8-156 (307)
292 1t4h_A Serine/threonine-protei 99.9 2.2E-23 7.7E-28 210.5 15.6 147 493-643 27-183 (290)
293 3gxj_A TGF-beta receptor type- 99.9 1.8E-24 6.1E-29 219.9 7.5 146 492-643 3-159 (303)
294 4fl3_A Tyrosine-protein kinase 99.9 1E-23 3.5E-28 235.2 14.1 141 498-643 375-520 (635)
295 3nsz_A CK II alpha, casein kin 99.9 2.5E-23 8.6E-28 214.3 15.9 142 492-643 36-182 (330)
296 2i6l_A Mitogen-activated prote 99.9 1.7E-23 5.9E-28 214.3 14.6 145 492-642 11-171 (320)
297 3m2w_A MAP kinase-activated pr 99.9 2.5E-23 8.7E-28 211.1 15.6 145 492-644 17-172 (299)
298 2w5a_A Serine/threonine-protei 99.9 7.5E-24 2.6E-28 212.7 11.2 150 491-643 5-167 (279)
299 2x7f_A TRAF2 and NCK-interacti 99.9 7.4E-24 2.5E-28 217.9 11.2 152 487-642 19-179 (326)
300 3an0_A Dual specificity mitoge 99.9 1.9E-23 6.6E-28 216.1 14.4 148 491-642 50-204 (340)
301 1u46_A ACK-1, activated CDC42 99.9 9.4E-24 3.2E-28 213.3 11.7 148 492-643 18-172 (291)
302 4azs_A Methyltransferase WBDD; 99.9 7.8E-24 2.7E-28 232.6 11.9 138 500-644 242-391 (569)
303 2yfx_A Tyrosine-protein kinase 99.9 1.1E-23 3.7E-28 216.8 12.2 148 492-642 30-193 (327)
304 3ll6_A Cyclin G-associated kin 99.9 2.2E-23 7.5E-28 215.2 14.2 148 492-643 28-189 (337)
305 2r3i_A Cell division protein k 99.9 2E-23 6.7E-28 211.9 13.4 147 492-642 3-153 (299)
306 1b6c_B TGF-B superfamily recep 99.9 7.8E-23 2.7E-27 211.7 17.7 150 488-643 38-198 (342)
307 3fme_A Dual specificity mitoge 99.9 1.8E-23 6.2E-28 211.1 12.6 149 491-643 6-161 (290)
308 3lm5_A Serine/threonine-protei 99.9 2E-23 7E-28 214.6 13.1 156 485-643 21-185 (327)
309 1byg_A CSK, protein (C-termina 99.9 8.7E-24 3E-28 212.2 10.0 146 491-642 20-167 (278)
310 2v62_A Serine/threonine-protei 99.9 9.6E-24 3.3E-28 218.8 10.3 146 492-642 37-203 (345)
311 2wtk_C Serine/threonine-protei 99.9 4.4E-23 1.5E-27 209.9 15.0 149 491-643 4-160 (305)
312 2xrw_A Mitogen-activated prote 99.9 4.5E-23 1.5E-27 215.9 15.1 146 491-643 24-178 (371)
313 3qyz_A Mitogen-activated prote 99.9 3.9E-23 1.3E-27 215.9 14.6 147 491-643 26-179 (364)
314 2wei_A Calmodulin-domain prote 99.9 5.6E-23 1.9E-27 207.2 15.2 151 489-643 19-175 (287)
315 2j0j_A Focal adhesion kinase 1 99.9 3.4E-23 1.2E-27 231.8 14.7 149 491-643 389-542 (656)
316 4hgt_A Casein kinase I isoform 99.9 5.2E-23 1.8E-27 208.3 14.7 148 490-643 7-159 (296)
317 2fst_X Mitogen-activated prote 99.9 1.4E-23 4.7E-28 219.1 10.3 147 491-643 28-183 (367)
318 2b9h_A MAP kinase FUS3, mitoge 99.9 5.6E-23 1.9E-27 213.7 14.6 147 491-643 10-163 (353)
319 3q60_A ROP5B; pseudokinase, tr 99.9 1.8E-23 6.3E-28 218.9 11.0 148 492-643 62-245 (371)
320 3uzp_A CKI-delta, CKID, casein 99.9 8.9E-23 3E-27 206.7 15.6 147 491-643 8-159 (296)
321 2jii_A Serine/threonine-protei 99.9 1.1E-23 3.6E-28 219.1 8.2 143 492-643 42-212 (352)
322 3sv0_A Casein kinase I-like; t 99.9 9.5E-23 3.3E-27 219.5 15.9 148 491-644 6-158 (483)
323 4e7w_A Glycogen synthase kinas 99.9 5.5E-23 1.9E-27 216.9 13.5 144 492-643 40-193 (394)
324 1j1b_A Glycogen synthase kinas 99.9 6.2E-23 2.1E-27 218.3 13.9 144 492-643 54-208 (420)
325 2iwi_A Serine/threonine-protei 99.9 2E-23 6.7E-28 213.3 9.1 154 486-643 25-191 (312)
326 1blx_A Cyclin-dependent kinase 99.9 8.1E-23 2.8E-27 210.0 13.2 151 489-643 8-171 (326)
327 4exu_A Mitogen-activated prote 99.9 7.2E-23 2.5E-27 214.3 12.4 146 491-643 41-195 (371)
328 2pzi_A Probable serine/threoni 99.9 6.4E-23 2.2E-27 231.8 12.1 145 492-643 80-232 (681)
329 3kvw_A DYRK2, dual specificity 99.9 2E-22 6.7E-27 215.0 15.2 147 492-643 97-253 (429)
330 3cek_A Dual specificity protei 99.9 1.3E-22 4.5E-27 207.2 12.9 149 489-643 25-177 (313)
331 3aln_A Dual specificity mitoge 99.9 2.1E-22 7.1E-27 207.1 14.2 148 492-643 22-177 (327)
332 3rgf_A Cyclin-dependent kinase 99.9 1.1E-22 3.8E-27 215.6 12.5 144 494-643 22-183 (405)
333 1wak_A Serine/threonine-protei 99.9 1.2E-22 4E-27 214.8 12.5 133 492-629 37-184 (397)
334 3e3p_A Protein kinase, putativ 99.9 3.5E-22 1.2E-26 208.4 15.8 156 485-643 16-183 (360)
335 2y4i_B KSR2, HKSR2, kinase sup 99.9 2E-23 7E-28 213.8 6.4 148 489-642 30-179 (319)
336 3a99_A Proto-oncogene serine/t 99.9 1E-22 3.4E-27 208.8 11.3 151 489-643 40-201 (320)
337 3coi_A Mitogen-activated prote 99.9 1.1E-22 3.8E-27 211.5 11.5 144 492-642 24-176 (353)
338 1z57_A Dual specificity protei 99.9 3.4E-22 1.2E-26 206.4 14.5 147 492-643 14-188 (339)
339 3fhr_A MAP kinase-activated pr 99.9 5E-22 1.7E-26 205.0 15.0 146 491-643 27-182 (336)
340 1zar_A RIO2 kinase; serine kin 99.9 4.6E-22 1.6E-26 199.3 14.2 145 484-644 82-244 (282)
341 2dyl_A Dual specificity mitoge 99.9 3.1E-22 1.1E-26 204.9 12.9 149 491-643 24-176 (318)
342 3cvr_A Invasion plasmid antige 99.9 4E-22 1.4E-26 217.8 13.8 147 210-376 100-253 (571)
343 2o6s_A Variable lymphocyte rec 99.9 5.4E-22 1.9E-26 189.9 13.1 156 211-396 29-184 (208)
344 3p23_A Serine/threonine-protei 99.9 2E-22 7E-27 214.7 11.3 145 492-643 24-174 (432)
345 2vx3_A Dual specificity tyrosi 99.9 8.4E-22 2.9E-26 207.1 15.7 151 490-643 52-212 (382)
346 2rio_A Serine/threonine-protei 99.9 4.5E-22 1.5E-26 212.6 13.5 144 493-643 16-179 (434)
347 2o6s_A Variable lymphocyte rec 99.9 1.2E-21 4.2E-26 187.4 15.2 130 164-293 30-160 (208)
348 2v9t_B SLIT homolog 2 protein 99.9 6.4E-22 2.2E-26 190.9 12.7 152 237-391 14-166 (220)
349 3qa8_A MGC80376 protein; kinas 99.9 1.3E-22 4.3E-27 223.4 8.3 150 491-643 13-175 (676)
350 3cvr_A Invasion plasmid antige 99.9 8.9E-22 3.1E-26 215.0 14.7 183 187-396 60-249 (571)
351 2v70_A SLIT-2, SLIT homolog 2 99.9 4.3E-22 1.5E-26 192.1 10.3 136 260-395 34-171 (220)
352 2eu9_A Dual specificity protei 99.9 1.2E-21 4.1E-26 203.7 14.3 147 492-643 19-193 (355)
353 2v9t_B SLIT homolog 2 protein 99.9 9.5E-22 3.2E-26 189.7 10.6 151 213-366 14-165 (220)
354 1q8y_A SR protein kinase; tran 99.9 8.1E-22 2.8E-26 206.6 10.8 147 492-643 19-189 (373)
355 2v70_A SLIT-2, SLIT homolog 2 99.9 2.6E-21 8.8E-26 186.7 13.4 159 260-420 13-173 (220)
356 3en9_A Glycoprotease, O-sialog 99.9 1.4E-21 4.9E-26 213.5 12.6 135 495-644 339-481 (540)
357 2xot_A Amphoterin-induced prot 99.9 1.5E-21 5.2E-26 203.4 12.1 180 189-394 21-206 (361)
358 1h6t_A Internalin B; cell adhe 99.9 2.8E-21 9.5E-26 194.9 13.3 172 183-391 43-214 (291)
359 1m9s_A Internalin B; cell inva 99.8 1.5E-21 5E-26 215.7 11.7 173 58-251 42-214 (605)
360 1h6t_A Internalin B; cell adhe 99.8 4.1E-21 1.4E-25 193.7 12.4 189 138-367 26-214 (291)
361 3e6j_A Variable lymphocyte rec 99.8 1.6E-20 5.5E-25 182.4 14.9 154 237-394 22-176 (229)
362 1m9s_A Internalin B; cell inva 99.8 9.7E-21 3.3E-25 209.1 14.1 172 183-367 40-211 (605)
363 2xot_A Amphoterin-induced prot 99.8 1.2E-20 4.2E-25 196.5 12.7 160 163-342 40-202 (361)
364 3e6j_A Variable lymphocyte rec 99.8 1E-19 3.5E-24 176.7 14.9 155 260-417 21-176 (229)
365 1w8a_A SLIT protein; signaling 99.8 1.7E-20 5.7E-25 176.9 9.0 155 261-417 11-166 (192)
366 3dzo_A Rhoptry kinase domain; 99.8 1.2E-20 4.2E-25 200.1 9.0 147 492-642 78-261 (413)
367 1xeu_A Internalin C; cellular 99.8 6E-21 2.1E-25 189.4 4.1 170 185-392 18-187 (263)
368 1xeu_A Internalin C; cellular 99.8 2E-20 7E-25 185.6 7.9 170 33-249 18-187 (263)
369 1dce_A Protein (RAB geranylger 99.8 1.3E-22 4.3E-27 222.9 -10.1 191 183-395 346-551 (567)
370 3sb4_A Hypothetical leucine ri 99.8 3.8E-20 1.3E-24 190.3 7.5 103 280-384 225-328 (329)
371 4b8c_D Glucose-repressible alc 99.8 1.3E-20 4.5E-25 213.4 4.4 161 169-339 208-369 (727)
372 1dce_A Protein (RAB geranylger 99.8 1.9E-21 6.5E-26 213.6 -3.8 189 207-417 346-550 (567)
373 4ezg_A Putative uncharacterize 99.8 1.5E-19 5.1E-24 171.2 9.7 154 207-391 41-195 (197)
374 1zth_A RIO1 serine protein kin 99.8 5.3E-20 1.8E-24 182.0 6.2 140 493-644 48-221 (258)
375 4b8c_D Glucose-repressible alc 99.8 1.7E-20 6E-25 212.3 3.0 190 191-390 206-404 (727)
376 3sb4_A Hypothetical leucine ri 99.8 2.5E-19 8.6E-24 184.1 11.4 264 9-286 24-326 (329)
377 4ezg_A Putative uncharacterize 99.8 1.2E-18 4.3E-23 164.8 13.0 150 185-342 43-194 (197)
378 1w8a_A SLIT protein; signaling 99.8 8.1E-19 2.8E-23 165.3 11.0 175 237-418 11-188 (192)
379 2wfh_A SLIT homolog 2 protein 99.8 5.4E-19 1.9E-23 166.5 9.0 131 261-394 13-143 (193)
380 4fdw_A Leucine rich hypothetic 99.8 2.5E-17 8.4E-22 173.1 21.1 265 59-366 113-383 (401)
381 4fdw_A Leucine rich hypothetic 99.8 5E-17 1.7E-21 170.7 23.2 263 8-291 111-380 (401)
382 2o6r_A Variable lymphocyte rec 99.7 1.7E-17 5.7E-22 154.2 12.7 134 260-395 9-142 (177)
383 2ell_A Acidic leucine-rich nuc 99.7 2.4E-17 8.2E-22 151.7 10.5 132 258-391 24-161 (168)
384 2ell_A Acidic leucine-rich nuc 99.7 3.9E-17 1.3E-21 150.3 11.1 130 163-294 25-160 (168)
385 2wfh_A SLIT homolog 2 protein 99.7 8.5E-17 2.9E-21 151.4 12.8 128 237-367 13-140 (193)
386 4fs7_A Uncharacterized protein 99.7 8.7E-16 3E-20 161.8 21.1 317 22-386 59-375 (394)
387 4gyi_A RIO2 kinase; protein ki 99.7 1.3E-17 4.5E-22 171.0 6.1 145 486-642 89-265 (397)
388 4fs7_A Uncharacterized protein 99.7 1.8E-15 6.3E-20 159.3 21.6 328 5-382 66-393 (394)
389 2je0_A Acidic leucine-rich nuc 99.7 4.9E-17 1.7E-21 146.3 8.1 127 258-386 17-149 (149)
390 2je0_A Acidic leucine-rich nuc 99.7 9.5E-17 3.2E-21 144.5 8.8 126 162-289 17-148 (149)
391 2o6r_A Variable lymphocyte rec 99.6 1.5E-15 5E-20 141.0 13.9 110 163-272 29-138 (177)
392 1a9n_A U2A', U2A'; complex (nu 99.6 2.2E-16 7.5E-21 146.4 7.3 133 254-391 15-154 (176)
393 1ds9_A Outer arm dynein; leuci 99.6 2.8E-18 9.7E-23 162.5 -6.4 129 210-342 18-153 (198)
394 1a9n_A U2A', U2A'; complex (nu 99.6 2.9E-16 1E-20 145.6 6.6 111 181-294 14-126 (176)
395 1ds9_A Outer arm dynein; leuci 99.6 3.4E-18 1.2E-22 161.9 -7.2 155 230-390 14-185 (198)
396 3g39_A Variable lymphocyte rec 99.6 5.9E-15 2E-19 135.7 10.7 90 305-394 30-119 (170)
397 3g39_A Variable lymphocyte rec 99.6 1.1E-14 3.6E-19 134.1 10.7 108 259-368 10-117 (170)
398 2r9u_A Variable lymphocyte rec 99.5 1.5E-14 5.2E-19 133.4 10.6 90 305-394 33-122 (174)
399 2r9u_A Variable lymphocyte rec 99.5 2.5E-14 8.7E-19 132.0 10.7 106 260-367 14-119 (174)
400 4gt6_A Cell surface protein; l 99.5 1.8E-12 6.3E-17 136.3 24.9 335 22-389 51-390 (394)
401 4gt6_A Cell surface protein; l 99.5 1.6E-12 5.6E-17 136.6 23.2 328 6-366 59-391 (394)
402 2ifg_A High affinity nerve gro 99.4 1.5E-13 5.2E-18 142.0 8.3 93 301-394 27-120 (347)
403 3un9_A NLR family member X1; l 99.4 8E-16 2.7E-20 159.9 -9.0 150 59-231 101-260 (372)
404 2ifg_A High affinity nerve gro 99.4 1.6E-13 5.6E-18 141.7 7.5 132 262-395 12-146 (347)
405 3un9_A NLR family member X1; l 99.3 2.9E-14 1E-18 148.1 -3.0 162 210-391 72-253 (372)
406 4h09_A Hypothetical leucine ri 99.3 8.4E-11 2.9E-15 122.9 22.6 315 6-377 42-356 (379)
407 3tm0_A Aminoglycoside 3'-phosp 99.3 3.5E-12 1.2E-16 126.2 11.4 146 489-641 11-213 (263)
408 4h09_A Hypothetical leucine ri 99.3 2.1E-10 7.2E-15 119.8 23.1 299 59-390 46-345 (379)
409 1nd4_A Aminoglycoside 3'-phosp 99.2 3.6E-11 1.2E-15 118.6 10.3 137 493-641 21-214 (264)
410 3dxp_A Putative acyl-COA dehyd 99.0 1E-09 3.6E-14 113.6 10.5 143 495-641 41-248 (359)
411 2ra8_A Uncharacterized protein 98.9 1.5E-10 5E-15 119.2 2.1 84 303-388 250-341 (362)
412 2ra8_A Uncharacterized protein 98.9 4.5E-10 1.5E-14 115.6 2.7 184 186-391 107-321 (362)
413 3r70_A Aminoglycoside phosphot 98.6 1.7E-07 5.8E-12 95.2 11.7 136 493-641 38-237 (320)
414 3sg8_A APH(2'')-ID; antibiotic 98.5 2.7E-07 9.3E-12 92.9 9.7 136 497-641 25-223 (304)
415 1io0_A Tropomodulin; LRR prote 98.5 1.3E-08 4.5E-13 94.4 -0.4 62 185-246 92-163 (185)
416 3rw6_A Nuclear RNA export fact 98.5 1.9E-08 6.5E-13 98.1 0.6 79 304-383 169-257 (267)
417 1io0_A Tropomodulin; LRR prote 98.5 3.5E-08 1.2E-12 91.5 1.9 92 180-271 30-136 (185)
418 3d1u_A Putative fructosamine-3 98.4 1.2E-06 4.2E-11 87.1 12.5 77 495-575 18-97 (288)
419 3tdw_A Gentamicin resistance p 98.4 1.5E-06 5.2E-11 87.4 12.3 136 497-641 24-224 (306)
420 3rw6_A Nuclear RNA export fact 98.4 7.1E-08 2.4E-12 94.1 2.1 61 209-271 169-233 (267)
421 4gkh_A Aminoglycoside 3'-phosp 98.4 3.9E-06 1.3E-10 82.7 14.6 135 499-641 31-223 (272)
422 3ovc_A Hygromycin-B 4-O-kinase 98.3 3.8E-06 1.3E-10 86.5 11.9 77 494-576 43-122 (362)
423 3ats_A Putative uncharacterize 98.2 1.8E-06 6.1E-11 89.0 7.5 80 497-576 25-121 (357)
424 2olc_A MTR kinase, methylthior 98.0 2.7E-05 9.3E-10 81.4 10.9 75 497-573 35-120 (397)
425 3e4g_A ATP synthase subunit S, 98.0 4E-06 1.4E-10 75.8 3.7 84 305-388 61-150 (176)
426 3e4g_A ATP synthase subunit S, 97.9 5.7E-06 2E-10 74.7 3.3 83 187-269 62-150 (176)
427 2q83_A YTAA protein; 2635576, 97.9 5.2E-05 1.8E-09 77.3 10.9 140 497-641 37-252 (346)
428 3jr1_A Putative fructosamine-3 97.8 0.00016 5.5E-09 72.4 12.2 138 495-637 39-232 (312)
429 3f7w_A Putative fructosamine-3 97.6 0.00024 8.2E-09 70.5 10.4 78 493-574 16-96 (288)
430 1pgv_A TMD-1, tropomodulin TMD 97.5 2E-05 7E-10 72.5 1.3 87 59-146 41-136 (197)
431 2pyw_A Uncharacterized protein 97.5 0.00035 1.2E-08 73.4 10.5 74 496-572 38-122 (420)
432 3rfe_A Platelet glycoprotein I 97.4 0.00021 7.2E-09 61.4 6.3 57 333-391 12-69 (130)
433 2ppq_A HSK, HK, homoserine kin 97.2 0.0011 3.6E-08 66.9 10.1 156 482-640 7-216 (322)
434 3csv_A Aminoglycoside phosphot 97.2 0.0025 8.6E-08 64.5 12.4 139 498-641 24-217 (333)
435 1pgv_A TMD-1, tropomodulin TMD 97.2 5.6E-05 1.9E-09 69.6 -0.1 13 233-245 156-168 (197)
436 3dxq_A Choline/ethanolamine ki 97.1 0.0012 4.2E-08 65.8 8.6 74 494-575 20-95 (301)
437 3rfe_A Platelet glycoprotein I 97.0 0.0009 3.1E-08 57.4 6.3 57 63-121 12-69 (130)
438 1zyl_A Hypothetical protein YI 97.0 0.0033 1.1E-07 63.3 11.3 75 498-574 32-113 (328)
439 3feg_A Choline/ethanolamine ki 96.8 0.0035 1.2E-07 64.4 9.4 140 497-641 55-254 (379)
440 1nw1_A Choline kinase (49.2 KD 96.7 0.0033 1.1E-07 65.9 8.8 72 497-574 78-158 (429)
441 2qg7_A Ethanolamine kinase PV0 96.5 0.011 3.6E-07 62.5 10.4 74 497-575 113-188 (458)
442 3c5i_A Choline kinase; choline 96.3 0.0062 2.1E-07 62.5 7.3 73 497-574 38-120 (369)
443 3i1a_A Spectinomycin phosphotr 96.3 0.039 1.3E-06 55.8 13.0 32 610-641 205-236 (339)
444 3f2s_A CK, chetk-alpha, cholin 95.6 0.036 1.2E-06 57.1 9.2 139 498-640 58-279 (401)
445 3mes_A Choline kinase; malaria 93.8 0.22 7.4E-06 51.7 9.8 73 497-574 75-156 (424)
446 2ks1_B Epidermal growth factor 88.4 0.49 1.7E-05 31.1 3.6 6 437-442 13-18 (44)
447 3g15_A CK, chetk-alpha, cholin 88.1 0.4 1.4E-05 49.5 4.8 30 612-641 245-280 (401)
448 2jwa_A Receptor tyrosine-prote 80.8 1.1 3.6E-05 29.4 2.4 7 438-444 14-20 (44)
449 3cxl_A N-chimerin; SH2, RHO-GA 80.6 0.17 5.7E-06 53.4 -2.3 60 496-558 146-214 (463)
450 4ano_A ESSB; membrane protein, 76.9 8.1 0.00028 35.6 8.2 87 545-642 47-134 (219)
451 4ann_A ESSB; membrane protein, 75.0 5.5 0.00019 36.6 6.4 87 545-642 42-129 (215)
452 2k1k_A Ephrin type-A receptor 61.7 5.1 0.00018 25.4 2.3 10 437-446 12-21 (38)
453 2lz0_A Uncharacterized protein 59.0 21 0.00072 28.2 6.1 44 317-361 8-51 (100)
454 2lz0_A Uncharacterized protein 54.2 31 0.0011 27.2 6.4 46 198-244 8-53 (100)
455 2l2t_A Receptor tyrosine-prote 34.9 31 0.0011 22.6 2.7 29 440-468 13-41 (44)
456 2klu_A T-cell surface glycopro 29.6 44 0.0015 23.8 2.9 6 460-465 34-39 (70)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.9e-55 Score=505.39 Aligned_cols=408 Identities=34% Similarity=0.533 Sum_probs=281.0
Q ss_pred CCCCCCEEECCCCcccccCCcCccCC-CCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCcc-ccCCCCC
Q 046544 8 NLQNLEELDLRHNKLVGTVPAAIFNM-SMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRF-IFNASKL 85 (646)
Q Consensus 8 ~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L 85 (646)
.+++|++|+|++|++++..|..+..+ ++|++|+|++|.+++.++.. +..+++|++|+|++|++++.+|.. +..+++|
T Consensus 267 ~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~-~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L 345 (768)
T 3rgz_A 267 PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPF-FGSCSLLESLALSSNNFSGELPMDTLLKMRGL 345 (768)
T ss_dssp CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGG-GGGCTTCCEEECCSSEEEEECCHHHHTTCTTC
T ss_pred ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchH-HhcCCCccEEECCCCcccCcCCHHHHhcCCCC
Confidence 56666666666666666666666554 66666666666666544432 123666666666666666555544 6666666
Q ss_pred cEEEcccCccccccCccccCcC-CCCEEEccCCCCCCCCCcccccccCCC--CCCCCEEECCCCCCCCcCCcchhccccc
Q 046544 86 SILELSQNSFSGFIPNTFGNLR-NLEWLNLRDNYLTSSTPELSFLSSLSN--CKSLTFIHLSDNPLDGILSKTSIGNLSH 162 (646)
Q Consensus 86 ~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~~l~~--l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 162 (646)
++|+|++|.+++..|..+..++ +|++|+|++|+++... +..+.. +++|++|++++|.+.+..+.. +.. .+
T Consensus 346 ~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~-----~~~~~~~~~~~L~~L~L~~n~l~~~~p~~-l~~-l~ 418 (768)
T 3rgz_A 346 KVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI-----LPNLCQNPKNTLQELYLQNNGFTGKIPPT-LSN-CS 418 (768)
T ss_dssp CEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEEC-----CTTTTCSTTCCCCEEECCSSEEEEECCGG-GGG-CT
T ss_pred CEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCc-----ChhhhhcccCCccEEECCCCccccccCHH-Hhc-CC
Confidence 6666666666666666666665 6666666666665321 112222 455555666655555443322 122 23
Q ss_pred cCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEec
Q 046544 163 SLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELG 242 (646)
Q Consensus 163 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 242 (646)
+|+.|++++|.+++..|..+..+++|+.|++++|++.+.+|..+..+++|++|++++|++++.+|..|..+++|++|+|+
T Consensus 419 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 498 (768)
T 3rgz_A 419 ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLS 498 (768)
T ss_dssp TCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECC
T ss_pred CCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEcc
Confidence 45555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred CCcccccCCccccCCCCCceeecCCCccc-ccccccccccccccccCCCCcccCC-------------------------
Q 046544 243 GNKLFGSIPACFSNLASLRILSLSSNELT-SIPLTFWNLKDILQLNFSSNFLTGP------------------------- 296 (646)
Q Consensus 243 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~l~~N~l~~~------------------------- 296 (646)
+|++++..|.+|+.+++|++|++++|.++ .+|..+..+++|+.|++++|.+++.
T Consensus 499 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~ 578 (768)
T 3rgz_A 499 NNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYI 578 (768)
T ss_dssp SSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEE
T ss_pred CCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccc
Confidence 55555555555555555555555555555 4455555555555555555555544
Q ss_pred ---------------------------------------------CCCccCccccceEEEcccccccccCccccCCCCCC
Q 046544 297 ---------------------------------------------LPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNL 331 (646)
Q Consensus 297 ---------------------------------------------~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L 331 (646)
.|..++.+++|+.||+++|+++|.+|..|+.+++|
T Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L 658 (768)
T 3rgz_A 579 KNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYL 658 (768)
T ss_dssp ECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTC
T ss_pred ccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccC
Confidence 44456667889999999999999999999999999
Q ss_pred CEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccCCCCCCCCccccccCCc
Q 046544 332 EYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFAAESFEGNE 411 (646)
Q Consensus 332 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~N~ 411 (646)
+.|+|++|+++|.+|+.|+.+++|+.|||++|++++.+|..+..+++|++||+++|+++|.+|..+.+.++....+.|||
T Consensus 659 ~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~ 738 (768)
T 3rgz_A 659 FILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNP 738 (768)
T ss_dssp CEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCT
T ss_pred CEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcccCCCcc
Q 046544 412 LLCGSPTLQVLPCKT 426 (646)
Q Consensus 412 ~~c~~~~~~~~~~~~ 426 (646)
.+|+.|+. +|..
T Consensus 739 ~Lcg~~l~---~C~~ 750 (768)
T 3rgz_A 739 GLCGYPLP---RCDP 750 (768)
T ss_dssp EEESTTSC---CCCS
T ss_pred hhcCCCCc---CCCC
Confidence 99998864 6753
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.8e-53 Score=487.36 Aligned_cols=407 Identities=35% Similarity=0.539 Sum_probs=348.2
Q ss_pred CCccccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccC
Q 046544 2 IPLEISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFN 81 (646)
Q Consensus 2 ip~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 81 (646)
+|. ++++++|++|+|++|++++..|.+|.++++|++|+|++|.+++.++.. .+++|++|+|++|++++.+|..++.
T Consensus 216 ~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~---~l~~L~~L~L~~n~l~~~ip~~~~~ 291 (768)
T 3rgz_A 216 IPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL---PLKSLQYLSLAENKFTGEIPDFLSG 291 (768)
T ss_dssp CCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC---CCTTCCEEECCSSEEEESCCCCSCT
T ss_pred Ccc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc---ccCCCCEEECcCCccCCccCHHHHh
Confidence 444 899999999999999999889999999999999999999998765554 4788888888888888888888776
Q ss_pred C-CCCcEEEcccCccccccCccccCcCCCCEEEccCCCCC-CCCCcccccccCCCCCCCCEEECCCCCCCCcCCcch---
Q 046544 82 A-SKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLT-SSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTS--- 156 (646)
Q Consensus 82 l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~--- 156 (646)
. ++|++|+|++|++++..|..|+++++|++|+|++|+++ .++.. .+.++++|++|++++|++.+..+...
T Consensus 292 ~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~-----~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l 366 (768)
T 3rgz_A 292 ACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD-----TLLKMRGLKVLDLSFNEFSGELPESLTNL 366 (768)
T ss_dssp TCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHH-----HHTTCTTCCEEECCSSEEEECCCTTHHHH
T ss_pred hcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHH-----HHhcCCCCCEEeCcCCccCccccHHHHhh
Confidence 5 88888888888888888888888888888888888887 43321 25667777777777777654332211
Q ss_pred ----------------------hccccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCe
Q 046544 157 ----------------------IGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQG 214 (646)
Q Consensus 157 ----------------------~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 214 (646)
.....++|++|++++|.+++.+|..+.++++|++|++++|++++..|..|.++++|++
T Consensus 367 ~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 446 (768)
T 3rgz_A 367 SASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRD 446 (768)
T ss_dssp TTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCE
T ss_pred hcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCE
Confidence 1111346888888888888888999999999999999999999999999999999999
Q ss_pred EEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCccc-ccccccccccccccccCCCCcc
Q 046544 215 LGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELT-SIPLTFWNLKDILQLNFSSNFL 293 (646)
Q Consensus 215 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~l~~N~l 293 (646)
|++++|.+.+.+|..|..+++|++|++++|++++..|..|.++++|++|++++|+++ .+|.++..+++|+.|++++|.+
T Consensus 447 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 526 (768)
T 3rgz_A 447 LKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 526 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred EECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcc
Confidence 999999999999999999999999999999999999999999999999999999998 7788899999999999999999
Q ss_pred cCCCCCccCccccceEEEcccccccccCccc-------------------------------------------------
Q 046544 294 TGPLPLEIGNLKVLIGIDFSMNNFSSVIPTE------------------------------------------------- 324 (646)
Q Consensus 294 ~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~------------------------------------------------- 324 (646)
++.+|..++.+++|+.|++++|.+++.+|..
T Consensus 527 ~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (768)
T 3rgz_A 527 SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNR 606 (768)
T ss_dssp EEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGG
T ss_pred cCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhc
Confidence 9999999999999999999999988766643
Q ss_pred ---------------------cCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCcee
Q 046544 325 ---------------------IGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLN 383 (646)
Q Consensus 325 ---------------------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 383 (646)
|+.+++|++|+|++|+++|.+|..|+.+++|+.|+|++|++++.+|..++.+++|+.||
T Consensus 607 l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~Ld 686 (768)
T 3rgz_A 607 LSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILD 686 (768)
T ss_dssp GGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEE
T ss_pred cccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEE
Confidence 34467899999999999999999999999999999999999999999999999999999
Q ss_pred CcCCcceeeccCC-CCCCCCccccccCCccccCCC
Q 046544 384 LSFNKLEGEIPRG-GSFGNFAAESFEGNELLCGSP 417 (646)
Q Consensus 384 L~~N~l~~~~p~~-~~~~~~~~~~~~~N~~~c~~~ 417 (646)
|++|+++|.+|.. ..++.++.+++++|++...-|
T Consensus 687 Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP 721 (768)
T 3rgz_A 687 LSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721 (768)
T ss_dssp CCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECC
T ss_pred CCCCcccCcCChHHhCCCCCCEEECcCCcccccCC
Confidence 9999999999876 558889999999998765333
No 3
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=5.9e-51 Score=472.76 Aligned_cols=411 Identities=21% Similarity=0.218 Sum_probs=304.7
Q ss_pred CccccCCCCCCEEECCCCcc-cccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCcc--c
Q 046544 3 PLEISNLQNLEELDLRHNKL-VGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRF--I 79 (646)
Q Consensus 3 p~~~~~l~~L~~L~L~~N~l-~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~ 79 (646)
|..|+++++|++|||++|.+ ..+.|.+|.++++|++|+|++|.|++..+. .+..+++|++|+|++|.+++..|.. |
T Consensus 41 ~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 119 (844)
T 3j0a_A 41 ASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD-AFQGLFHLFELRLYFCGLSDAVLKDGYF 119 (844)
T ss_dssp SSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT-SSCSCSSCCCEECTTCCCSSCCSTTCCC
T ss_pred hhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh-HccCCcccCEeeCcCCCCCcccccCccc
Confidence 45566666677777766643 333466666666677777776666654333 1224666666666666666544433 6
Q ss_pred cCCCCCcEEEcccCccccccC-ccccCcCCCCEEEccCCCCCCCCCccc---------------------ccccCCCCC-
Q 046544 80 FNASKLSILELSQNSFSGFIP-NTFGNLRNLEWLNLRDNYLTSSTPELS---------------------FLSSLSNCK- 136 (646)
Q Consensus 80 ~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~---------------------~~~~l~~l~- 136 (646)
.++++|++|+|++|.+++..+ ..|+++++|++|+|++|.++...+... .+..+..+.
T Consensus 120 ~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~ 199 (844)
T 3j0a_A 120 RNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMN 199 (844)
T ss_dssp SSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSC
T ss_pred cccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCC
Confidence 666666666666666665543 356666666666666666655432210 111223333
Q ss_pred -----CCCEEECCCCCCCCcCCcchhc-----------------------------------c-ccccCcEEEeeccccc
Q 046544 137 -----SLTFIHLSDNPLDGILSKTSIG-----------------------------------N-LSHSLKDFYMSNCNVS 175 (646)
Q Consensus 137 -----~L~~L~Ls~N~l~~~~~~~~~~-----------------------------------~-~~~~L~~L~L~~n~l~ 175 (646)
+|++|++++|.+.+..+..... . ...+|+.|++++|.+.
T Consensus 200 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~ 279 (844)
T 3j0a_A 200 PFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVF 279 (844)
T ss_dssp TTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCC
T ss_pred ccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCccc
Confidence 3899999999776433322111 0 1257999999999999
Q ss_pred ccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCcccc
Q 046544 176 GGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFS 255 (646)
Q Consensus 176 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~ 255 (646)
+..|..|..+++|+.|+|++|++.+..|..|.++++|++|+|++|++++..|.+|.++++|++|++++|++.+..+..|.
T Consensus 280 ~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~ 359 (844)
T 3j0a_A 280 SLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFK 359 (844)
T ss_dssp EECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSC
T ss_pred ccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhc
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999988888899
Q ss_pred CCCCCceeecCCCccccccc-----------------------------------------ccccccccccccCCCCccc
Q 046544 256 NLASLRILSLSSNELTSIPL-----------------------------------------TFWNLKDILQLNFSSNFLT 294 (646)
Q Consensus 256 ~l~~L~~L~L~~N~l~~lp~-----------------------------------------~~~~l~~L~~L~l~~N~l~ 294 (646)
++++|++|+|++|.++.++. .+..+++|+.|++++|.++
T Consensus 360 ~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~ 439 (844)
T 3j0a_A 360 FLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFS 439 (844)
T ss_dssp SCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCC
T ss_pred CCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCccc
Confidence 99999999999988876542 0224566777777777776
Q ss_pred CCCCC-ccCccccceEEEccccccc-----ccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCccc
Q 046544 295 GPLPL-EIGNLKVLIGIDFSMNNFS-----SVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGA 368 (646)
Q Consensus 295 ~~~~~-~~~~l~~L~~L~ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 368 (646)
+..+. .+..+++|+.|++++|.++ +..+..|.++++|+.|+|++|++++.+|..|.++++|+.|+|++|+|++.
T Consensus 440 ~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l 519 (844)
T 3j0a_A 440 SCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVL 519 (844)
T ss_dssp CCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSC
T ss_pred ccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCcc
Confidence 54433 3555677778888888776 34456688899999999999999988889999999999999999999977
Q ss_pred CCccccCCCCCCceeCcCCcceeeccCCCCCCCCccccccCCccccCCCC
Q 046544 369 IPTSLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFAAESFEGNELLCGSPT 418 (646)
Q Consensus 369 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~~ 418 (646)
.|..+. ++|+.|+|++|++++.+|.. +..++.+++++|||.|+|+.
T Consensus 520 ~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 520 SHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp CCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSSC
T ss_pred Chhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCccccccc
Confidence 777666 88999999999999887765 56899999999999999975
No 4
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.3e-50 Score=452.25 Aligned_cols=412 Identities=21% Similarity=0.205 Sum_probs=298.3
Q ss_pred CccccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCC
Q 046544 3 PLEISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNA 82 (646)
Q Consensus 3 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 82 (646)
|..|+++++|++|+|++|+++++.|.+|.++++|++|+|++|++++..+. .+..+++|++|+|++|++++..+..|.++
T Consensus 50 ~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~n~i~~l~~~~~~~l 128 (606)
T 3t6q_A 50 NTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAET-ALSGPKALKHLFFIQTGISSIDFIPLHNQ 128 (606)
T ss_dssp TTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTT-TTSSCTTCCEEECTTSCCSCGGGSCCTTC
T ss_pred hhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChh-hhcccccccEeeccccCcccCCcchhccC
Confidence 55677777777777777777766777777777777777777777654332 22236666666666666665555556666
Q ss_pred CCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCC--------------------------CCccc---------
Q 046544 83 SKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSS--------------------------TPELS--------- 127 (646)
Q Consensus 83 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--------------------------~~~~~--------- 127 (646)
++|++|+|++|++.++.+..+.++++|++|+|++|+++.. ++...
T Consensus 129 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~ 208 (606)
T 3t6q_A 129 KTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLN 208 (606)
T ss_dssp TTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEE
T ss_pred CcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccc
Confidence 6666666666666554433344455555555555554432 22110
Q ss_pred -------------------------------------------------------------ccccCCCCCCCCEEECCCC
Q 046544 128 -------------------------------------------------------------FLSSLSNCKSLTFIHLSDN 146 (646)
Q Consensus 128 -------------------------------------------------------------~~~~l~~l~~L~~L~Ls~N 146 (646)
.+..|+++++|++|++++|
T Consensus 209 l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 288 (606)
T 3t6q_A 209 FGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTAT 288 (606)
T ss_dssp CTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTS
T ss_pred cCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCC
Confidence 0112555666777777777
Q ss_pred CCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccC-ccccCCCCCCeEEeecccccCc
Q 046544 147 PLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIP-ITLSKLQKLQGLGLDDNKLEGS 225 (646)
Q Consensus 147 ~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~ 225 (646)
+++.++.. +.. .++|++|++++|.+.+..|..+..+++|++|++++|.+.+..| ..+..+++|++|++++|.+.+.
T Consensus 289 ~l~~lp~~--l~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 365 (606)
T 3t6q_A 289 HLSELPSG--LVG-LSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETS 365 (606)
T ss_dssp CCSCCCSS--CCS-CTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEE
T ss_pred ccCCCChh--hcc-cccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccc
Confidence 66655432 222 2467777777777777667777777777777777777764443 4477788888888888888765
Q ss_pred C--chhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCccccc-cc-ccccccccccccCCCCcccCCCCCcc
Q 046544 226 I--PDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSI-PL-TFWNLKDILQLNFSSNFLTGPLPLEI 301 (646)
Q Consensus 226 ~--~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l-p~-~~~~l~~L~~L~l~~N~l~~~~~~~~ 301 (646)
. +..+..+++|++|++++|++.+..|..|..+++|+.|++++|.++.. |. .+..+++|+.|++++|.+++..|..+
T Consensus 366 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 445 (606)
T 3t6q_A 366 DCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLF 445 (606)
T ss_dssp EESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTT
T ss_pred cCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHH
Confidence 5 67788888888888888888888888888888888888888888855 33 47788888999999998888888888
Q ss_pred CccccceEEEccccccccc---CccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCC
Q 046544 302 GNLKVLIGIDFSMNNFSSV---IPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSY 378 (646)
Q Consensus 302 ~~l~~L~~L~ls~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 378 (646)
..+++|+.|++++|.+++. .+..+..+++|++|++++|++++..|..|..+++|+.|+|++|++++..|..+..++.
T Consensus 446 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 525 (606)
T 3t6q_A 446 DGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKG 525 (606)
T ss_dssp TTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCS
T ss_pred hCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCcccc
Confidence 8899999999999988763 3356888899999999999999888889999999999999999999888999999999
Q ss_pred CCceeCcCCcceeeccCC-CCCCCCccccccCCccccCCCCc
Q 046544 379 LEDLNLSFNKLEGEIPRG-GSFGNFAAESFEGNELLCGSPTL 419 (646)
Q Consensus 379 L~~L~L~~N~l~~~~p~~-~~~~~~~~~~~~~N~~~c~~~~~ 419 (646)
| .|++++|++++.+|.. ..++.++.+++++|||.|+|+..
T Consensus 526 L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 566 (606)
T 3t6q_A 526 I-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNI 566 (606)
T ss_dssp C-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGH
T ss_pred c-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcH
Confidence 9 9999999999877764 44778899999999999988753
No 5
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.3e-50 Score=450.09 Aligned_cols=411 Identities=23% Similarity=0.237 Sum_probs=314.7
Q ss_pred CCCccccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCcccc
Q 046544 1 EIPLEISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIF 80 (646)
Q Consensus 1 ~ip~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 80 (646)
++|..+. +++++|+|++|+++++.+.+|.++++|++|+|++|.+++..+. .+..+++|++|+|++|++++..|..|.
T Consensus 25 ~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~-~~~~l~~L~~L~Ls~n~l~~~~p~~~~ 101 (606)
T 3vq2_A 25 KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDK-AWHGLHHLSNLILTGNPIQSFSPGSFS 101 (606)
T ss_dssp SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTT-TTTTCTTCCEEECTTCCCCCCCTTSST
T ss_pred cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHH-HhhchhhcCEeECCCCcccccChhhcC
Confidence 3566554 7888888888888888888888888888888888888765443 233588888888888888887788888
Q ss_pred CCCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcch--hc
Q 046544 81 NASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTS--IG 158 (646)
Q Consensus 81 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~--~~ 158 (646)
++++|++|+|++|.++++.+..|+++++|++|+|++|+++... ++..|+++++|++|++++|+++++.+..+ ..
T Consensus 102 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~----lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 177 (606)
T 3vq2_A 102 GLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCK----LPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLR 177 (606)
T ss_dssp TCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCC----CCGGGGTCTTCCEEECCSSCCCEECTTTTHHHH
T ss_pred CcccCCEEEccCCccccccccccCCCCCCCEEeCCCCccccee----chHhHhhcCCCCEEEccCCcceecChhhhhhhh
Confidence 8888888888888888887788888888888888888887632 34457788888888888888877654321 11
Q ss_pred ccc-----------------------ccCcEEEeecccccc---------------------------------------
Q 046544 159 NLS-----------------------HSLKDFYMSNCNVSG--------------------------------------- 176 (646)
Q Consensus 159 ~~~-----------------------~~L~~L~L~~n~l~~--------------------------------------- 176 (646)
.+. .+|+.|++++|.+++
T Consensus 178 ~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~ 257 (606)
T 3vq2_A 178 ENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEG 257 (606)
T ss_dssp HCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTT
T ss_pred ccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhh
Confidence 111 134555555554320
Q ss_pred -------------------cCCc---------------------ccccCCCCCEEEccCCccccccC-------------
Q 046544 177 -------------------GIPE---------------------EITNLTNSITIDLGGNKLNGSIP------------- 203 (646)
Q Consensus 177 -------------------~~p~---------------------~~~~l~~L~~L~L~~N~l~~~~~------------- 203 (646)
..|. .+..+++|+.|++++|++. .+|
T Consensus 258 l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~-~lp~~~l~~L~~L~l~ 336 (606)
T 3vq2_A 258 LCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLK-QFPTLDLPFLKSLTLT 336 (606)
T ss_dssp GGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCS-SCCCCCCSSCCEEEEE
T ss_pred hhhccHhheeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCc-ccccCCCCccceeecc
Confidence 0000 2333344455555555442 222
Q ss_pred -------ccccCCCCCCeEEeecccccCc--CchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccc
Q 046544 204 -------ITLSKLQKLQGLGLDDNKLEGS--IPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIP 274 (646)
Q Consensus 204 -------~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp 274 (646)
..+..+++|++|++++|++++. .|..+..+++|++|++++|.+.+ .|..|.++++|+.|++++|.++.++
T Consensus 337 ~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~ 415 (606)
T 3vq2_A 337 MNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVT 415 (606)
T ss_dssp SCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTT
T ss_pred CCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCcc
Confidence 1344556667777777777654 37778888888888888888875 4577888889999999999888765
Q ss_pred c--ccccccccccccCCCCcccCCCCCccCccccceEEEcccccccc-cCccccCCCCCCCEEEccCccCCCcccccccC
Q 046544 275 L--TFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSS-VIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGD 351 (646)
Q Consensus 275 ~--~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 351 (646)
. .+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++ ..|..|+.+++|++|++++|++++..|..|..
T Consensus 416 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 495 (606)
T 3vq2_A 416 EFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDT 495 (606)
T ss_dssp TTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred ChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcc
Confidence 3 67888999999999999998888999999999999999999987 47889999999999999999999888999999
Q ss_pred CCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccCCCCCC-CCccccccCCccccCCCCcc
Q 046544 352 LISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRGGSFG-NFAAESFEGNELLCGSPTLQ 420 (646)
Q Consensus 352 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~~~~~~~~~N~~~c~~~~~~ 420 (646)
+++|++|+|++|++++..|..|..+++|++|++++|+++..++....+. +++.+++++|||.|+|+..+
T Consensus 496 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~ 565 (606)
T 3vq2_A 496 LHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEHQK 565 (606)
T ss_dssp CTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTTHH
T ss_pred cccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCccHH
Confidence 9999999999999998889999999999999999999996444444454 58999999999999998753
No 6
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=8.7e-49 Score=445.49 Aligned_cols=411 Identities=25% Similarity=0.262 Sum_probs=295.2
Q ss_pred CCc-cccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCcccc
Q 046544 2 IPL-EISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIF 80 (646)
Q Consensus 2 ip~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 80 (646)
+|. .|+.+++|++|+|++|+++++.|.+|.++++|++|+|++|.+++.++.. +..+++|++|+|++|++++..+..+.
T Consensus 88 l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~ 166 (680)
T 1ziw_A 88 LSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGT-QVQLENLQELLLSNNKIQALKSEELD 166 (680)
T ss_dssp CCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCS-SSCCTTCCEEECCSSCCCCBCHHHHG
T ss_pred cChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchh-hcccccCCEEEccCCcccccCHHHhh
Confidence 444 4777777777777777777666677777777777777777776543331 12355566666665555544443322
Q ss_pred --CCCCCcEEEcccCcccc---------------------------------------------------ccCccccCcC
Q 046544 81 --NASKLSILELSQNSFSG---------------------------------------------------FIPNTFGNLR 107 (646)
Q Consensus 81 --~l~~L~~L~Ls~N~l~~---------------------------------------------------~~~~~~~~l~ 107 (646)
.+++|++|++++|.+++ ..|.+|.+++
T Consensus 167 ~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~ 246 (680)
T 1ziw_A 167 IFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLK 246 (680)
T ss_dssp GGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGG
T ss_pred ccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccC
Confidence 22334444444443333 3333344433
Q ss_pred C--CCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcch-----------------------------
Q 046544 108 N--LEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTS----------------------------- 156 (646)
Q Consensus 108 ~--L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~----------------------------- 156 (646)
. |++|+|++|+++..++ ..|+++++|++|++++|++.++.+..+
T Consensus 247 ~~~L~~L~Ls~n~l~~~~~-----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~ 321 (680)
T 1ziw_A 247 WTNLTMLDLSYNNLNVVGN-----DSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKID 321 (680)
T ss_dssp GSCCCEEECTTSCCCEECT-----TTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEEC
T ss_pred cCCCCEEECCCCCcCccCc-----ccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccC
Confidence 2 6666666665554432 235566666666666666655432211
Q ss_pred --hccccccCcEEEeecccccccCCcccccCCCCCEEEccC----------------------------CccccccCccc
Q 046544 157 --IGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGG----------------------------NKLNGSIPITL 206 (646)
Q Consensus 157 --~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~----------------------------N~l~~~~~~~~ 206 (646)
.....++|++|++++|.+++..|..|.++++|++|++++ |++.+..|.+|
T Consensus 322 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~ 401 (680)
T 1ziw_A 322 DFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAF 401 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTT
T ss_pred hhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhh
Confidence 001124677888888888877777777766666666554 45555667777
Q ss_pred cCCCCCCeEEeecccccCcCc-hhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCccc---ccccccccccc
Q 046544 207 SKLQKLQGLGLDDNKLEGSIP-DSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELT---SIPLTFWNLKD 282 (646)
Q Consensus 207 ~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~---~lp~~~~~l~~ 282 (646)
..+++|+.|++++|++.+.+| ..|.++++|++|++++|++.+..+..|..+++|+.|++++|.++ .+|..|..+++
T Consensus 402 ~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~ 481 (680)
T 1ziw_A 402 SWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRN 481 (680)
T ss_dssp TTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTT
T ss_pred hCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCC
Confidence 777888888888888775444 67778888888888888887777778888888888888888775 45778889999
Q ss_pred cccccCCCCcccCCCCCccCccccceEEEcccccccccCc--------cccCCCCCCCEEEccCccCCCcccccccCCCC
Q 046544 283 ILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIP--------TEIGGLKNLEYLFLGYNRLEGSIPDSFGDLIS 354 (646)
Q Consensus 283 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 354 (646)
|+.|++++|.+++..+..|.++++|+.|++++|.++++.+ ..|+++++|++|+|++|+++.+.+..|.++++
T Consensus 482 L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~ 561 (680)
T 1ziw_A 482 LTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFE 561 (680)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred CCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccC
Confidence 9999999999998888889999999999999999987633 34788999999999999999766678999999
Q ss_pred CCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccCCC--CCCCCccccccCCccccCCCC
Q 046544 355 LKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRGG--SFGNFAAESFEGNELLCGSPT 418 (646)
Q Consensus 355 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~--~~~~~~~~~~~~N~~~c~~~~ 418 (646)
|+.|+|++|++++..+..|..+++|+.|+|++|++++.+|... .++.++.+++++|||.|+|+.
T Consensus 562 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 562 LKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred cceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 9999999999998888888999999999999999998776542 478899999999999999985
No 7
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=4.6e-48 Score=433.64 Aligned_cols=404 Identities=22% Similarity=0.220 Sum_probs=317.0
Q ss_pred CCCccccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCcccc
Q 046544 1 EIPLEISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIF 80 (646)
Q Consensus 1 ~ip~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 80 (646)
++|..+. +++++|+|++|+|+++.|.+|.++++|++|+|++|.+++..+. .+..+++|++|+|++|++++..|..|.
T Consensus 26 ~iP~~l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 102 (606)
T 3t6q_A 26 EIPGTLP--NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHED-TFQSQHRLDTLVLTANPLIFMAETALS 102 (606)
T ss_dssp SCCTTSC--TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTT-TTTTCTTCCEEECTTCCCSEECTTTTS
T ss_pred cCcCCCC--CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChh-hccCccccCeeeCCCCcccccChhhhc
Confidence 4677765 4799999999999999999999999999999999999875443 334699999999999999999999999
Q ss_pred CCCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccc
Q 046544 81 NASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNL 160 (646)
Q Consensus 81 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 160 (646)
++++|++|+|++|+++++.|..|+++++|++|+|++|+++.++.. .+.++++|++|++++|.++++.+.. ++.+
T Consensus 103 ~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l 176 (606)
T 3t6q_A 103 GPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLP-----KGFPTEKLKVLDFQNNAIHYLSKED-MSSL 176 (606)
T ss_dssp SCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCC-----TTCCCTTCCEEECCSSCCCEECHHH-HHTT
T ss_pred ccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcc-----cccCCcccCEEEcccCcccccChhh-hhhh
Confidence 999999999999999998889999999999999999999986421 2334667777777777665543211 1110
Q ss_pred c----------------------------------------------------------------------------ccC
Q 046544 161 S----------------------------------------------------------------------------HSL 164 (646)
Q Consensus 161 ~----------------------------------------------------------------------------~~L 164 (646)
. .++
T Consensus 177 ~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L 256 (606)
T 3t6q_A 177 QQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSV 256 (606)
T ss_dssp TTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEE
T ss_pred cccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCce
Confidence 0 146
Q ss_pred cEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCC
Q 046544 165 KDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGN 244 (646)
Q Consensus 165 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 244 (646)
+.|++++|.+++..+..|..+++|++|++++|+++ .+|..+.++++|++|++++|++.+..|..+..+++|++|++++|
T Consensus 257 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 335 (606)
T 3t6q_A 257 ESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGN 335 (606)
T ss_dssp EEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSC
T ss_pred eEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCC
Confidence 66777777777766777778888888888888887 55667788888888888888888777778888888888888888
Q ss_pred cccccCC-ccccCCCCCceeecCCCccccc---ccccccccccccccCCCCcccCCCCCccCccccceEEEccccccccc
Q 046544 245 KLFGSIP-ACFSNLASLRILSLSSNELTSI---PLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSV 320 (646)
Q Consensus 245 ~i~~~~~-~~~~~l~~L~~L~L~~N~l~~l---p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~ 320 (646)
.+.+..| ..|..+++|++|++++|.++.+ |..+..+++|+.|++++|.+.+..|..|..+++|+.|++++|.+++.
T Consensus 336 ~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 415 (606)
T 3t6q_A 336 TKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVK 415 (606)
T ss_dssp SSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECC
T ss_pred CcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCc
Confidence 8774443 4577888888888888888765 45677788888888888888877778888888888888888888776
Q ss_pred Ccc-ccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCccc---CCccccCCCCCCceeCcCCcceeeccCC
Q 046544 321 IPT-EIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGA---IPTSLEKLSYLEDLNLSFNKLEGEIPRG 396 (646)
Q Consensus 321 ~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 396 (646)
.|. .|..+++|++|++++|.+++..|..|..+++|++|++++|++++. .+..+..+++|++|++++|++++.+|..
T Consensus 416 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 495 (606)
T 3t6q_A 416 DAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHA 495 (606)
T ss_dssp TTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTT
T ss_pred ccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhh
Confidence 554 477888888888888888877788888888888888888888752 3356778888888888888888776654
Q ss_pred -CCCCCCccccccCCcccc
Q 046544 397 -GSFGNFAAESFEGNELLC 414 (646)
Q Consensus 397 -~~~~~~~~~~~~~N~~~c 414 (646)
..++.++.+++++|.+..
T Consensus 496 ~~~l~~L~~L~Ls~N~l~~ 514 (606)
T 3t6q_A 496 FTSLKMMNHVDLSHNRLTS 514 (606)
T ss_dssp TTTCTTCCEEECCSSCCCG
T ss_pred hccccCCCEEECCCCccCc
Confidence 457778888888886543
No 8
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.3e-48 Score=431.59 Aligned_cols=411 Identities=23% Similarity=0.261 Sum_probs=317.7
Q ss_pred CCCccccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCcccc
Q 046544 1 EIPLEISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIF 80 (646)
Q Consensus 1 ~ip~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 80 (646)
+||..+. +++++|||++|+++++.+.+|.++++|++|+|++|++++..+. .+..+++|++|+|++|++++..|..|.
T Consensus 21 ~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (570)
T 2z63_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDG-AYQSLSHLSTLILTGNPIQSLALGAFS 97 (570)
T ss_dssp SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTT-TTTTCTTCCEEECTTCCCCEECTTTTT
T ss_pred ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcc-cccCchhCCEEeCcCCcCCccCHhhhc
Confidence 3566553 5788888888888887788888888888888888888764333 333578888888888888877778888
Q ss_pred CCCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcch--hc
Q 046544 81 NASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTS--IG 158 (646)
Q Consensus 81 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~--~~ 158 (646)
++++|++|++++|+++++.+..|+++++|++|+|++|.++.+. ++..|+++++|++|++++|+++++.+... ..
T Consensus 98 ~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~----lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 173 (570)
T 2z63_A 98 GLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK----LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLH 173 (570)
T ss_dssp TCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCC----CCGGGGGCTTCCEEECTTSCCCEECGGGGHHHH
T ss_pred CccccccccccccccccCCCccccccccccEEecCCCccceec----ChhhhcccCCCCEEeCcCCccceecHHHccchh
Confidence 8888888888888888776667888888888888888887642 23457778888888888887766543211 00
Q ss_pred ccc-----------------------ccCcEEEeecc-------------------------------------------
Q 046544 159 NLS-----------------------HSLKDFYMSNC------------------------------------------- 172 (646)
Q Consensus 159 ~~~-----------------------~~L~~L~L~~n------------------------------------------- 172 (646)
.+. .+|+.|++++|
T Consensus 174 ~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~ 253 (570)
T 2z63_A 174 QMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEG 253 (570)
T ss_dssp TCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGG
T ss_pred ccchhhhhcccCCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhcc
Confidence 000 02333333333
Q ss_pred ---------------cccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhh-------
Q 046544 173 ---------------NVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSI------- 230 (646)
Q Consensus 173 ---------------~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~------- 230 (646)
.+.+..|..+..+++|+.|++++|.+. .+|..+..+ +|++|++++|.+.......+
T Consensus 254 l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~~~~l~~L~~L~ 331 (570)
T 2z63_A 254 LCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQFPTLKLKSLKRLT 331 (570)
T ss_dssp GGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSSCCBCBCSSCCEEE
T ss_pred ccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccccCcccccccCEEe
Confidence 223334455555667777777777666 345555555 55666665555552221111
Q ss_pred ------------cCCCCCcEEEecCCcccccC--CccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCC
Q 046544 231 ------------CRLTELYELELGGNKLFGSI--PACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGP 296 (646)
Q Consensus 231 ------------~~l~~L~~L~L~~N~i~~~~--~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~ 296 (646)
..+++|++|++++|++++.. +..+.++++|++|++++|.++.+|..+..+++|+.|++++|.+.+.
T Consensus 332 l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~ 411 (570)
T 2z63_A 332 FTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQM 411 (570)
T ss_dssp EESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESC
T ss_pred CcCCccccccccccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccc
Confidence 56788899999999987654 6778899999999999999999988889999999999999999987
Q ss_pred CC-CccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCC-CcccccccCCCCCCEEEccCCcCcccCCcccc
Q 046544 297 LP-LEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLE-GSIPDSFGDLISLKFLNLSNNNLSGAIPTSLE 374 (646)
Q Consensus 297 ~~-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 374 (646)
.+ ..+..+++|+.|++++|.+++..|..|.++++|++|++++|+++ +.+|..|..+++|++|++++|++++..|..|.
T Consensus 412 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 491 (570)
T 2z63_A 412 SEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN 491 (570)
T ss_dssp TTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred cchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhh
Confidence 66 57899999999999999999999999999999999999999997 57899999999999999999999998899999
Q ss_pred CCCCCCceeCcCCcceeeccCC-CCCCCCccccccCCccccCCCCcc
Q 046544 375 KLSYLEDLNLSFNKLEGEIPRG-GSFGNFAAESFEGNELLCGSPTLQ 420 (646)
Q Consensus 375 ~l~~L~~L~L~~N~l~~~~p~~-~~~~~~~~~~~~~N~~~c~~~~~~ 420 (646)
.+++|++|++++|++++.+|.. ..++.++.+++++|++.|+|+..+
T Consensus 492 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 492 SLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 538 (570)
T ss_dssp TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred cccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchH
Confidence 9999999999999999977764 568899999999999999988643
No 9
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.9e-49 Score=440.80 Aligned_cols=353 Identities=20% Similarity=0.274 Sum_probs=219.5
Q ss_pred CCcCccCCCCCCEEECcCCcCcc------------------cCCccCcCCCCCCCEEEccCCcccccCCccccCCCCCcE
Q 046544 26 VPAAIFNMSMLKLLHLQNNSLLG------------------CLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKLSI 87 (646)
Q Consensus 26 ~~~~~~~l~~L~~L~L~~N~l~~------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 87 (646)
+|.+|.++++|++|+|++|.+++ .++.+.+..+++|++|+|++|++.+.+|..|+++++|++
T Consensus 198 ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 277 (636)
T 4eco_A 198 VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQL 277 (636)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCE
T ss_pred CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCE
Confidence 56666667777777777777666 334444223666777777777766666666666777777
Q ss_pred EEcccCc-ccc-ccCccccCc------CCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhcc
Q 046544 88 LELSQNS-FSG-FIPNTFGNL------RNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGN 159 (646)
Q Consensus 88 L~Ls~N~-l~~-~~~~~~~~l------~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 159 (646)
|+|++|+ +++ ..|..++.+ ++|++|+|++|+++.+|.. ..++++++|++|++++|++.+..+ .++.
T Consensus 278 L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~----~~l~~l~~L~~L~L~~N~l~g~ip--~~~~ 351 (636)
T 4eco_A 278 INVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVE----TSLQKMKKLGMLECLYNQLEGKLP--AFGS 351 (636)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCH----HHHTTCTTCCEEECCSCCCEEECC--CCEE
T ss_pred EECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCch----hhhccCCCCCEEeCcCCcCccchh--hhCC
Confidence 7777776 665 556666555 6677777777766643320 035666667777777776663322 2332
Q ss_pred ccccCcEEEeecccccccCCcccccCCC-CCEEEccCCccccccCccccCCC--CCCeEEeecccccCcCchhhc-----
Q 046544 160 LSHSLKDFYMSNCNVSGGIPEEITNLTN-SITIDLGGNKLNGSIPITLSKLQ--KLQGLGLDDNKLEGSIPDSIC----- 231 (646)
Q Consensus 160 ~~~~L~~L~L~~n~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~~----- 231 (646)
+ ++|++|++++|+++ .+|..+..+++ |++|++++|+++ .+|..+..++ +|++|++++|++.+..|..|.
T Consensus 352 l-~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~ 428 (636)
T 4eco_A 352 E-IKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPT 428 (636)
T ss_dssp E-EEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSS
T ss_pred C-CCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccc
Confidence 2 35666666666666 45666666666 666666666666 4555555443 666666666666666666666
Q ss_pred --CCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccccccccc--------cccccccCCCCcccCCCCCcc
Q 046544 232 --RLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNL--------KDILQLNFSSNFLTGPLPLEI 301 (646)
Q Consensus 232 --~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l--------~~L~~L~l~~N~l~~~~~~~~ 301 (646)
.+++|++|+|++|+++.+.+..+..+++|++|+|++|.++.+|..++.. ++|+.|++++|.++ .+|..+
T Consensus 429 ~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~ 507 (636)
T 4eco_A 429 PFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDF 507 (636)
T ss_dssp CCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGG
T ss_pred cccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhh
Confidence 5666666666666666544445555666666666666666666543332 26666666666666 455555
Q ss_pred C--ccccceEEEcccccccccCccccCCCCCCCEEEc------cCccCCCcccccccCCCCCCEEEccCCcCcccCCccc
Q 046544 302 G--NLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFL------GYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSL 373 (646)
Q Consensus 302 ~--~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 373 (646)
. .+++|+.|++++|++++ +|..+..+++|++|+| ++|++.+.+|..+..+++|++|+|++|+++ .+|..+
T Consensus 508 ~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~ip~~~ 585 (636)
T 4eco_A 508 RATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKI 585 (636)
T ss_dssp STTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC-BCCSCC
T ss_pred hhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCC-ccCHhH
Confidence 4 66666666666666665 5666666666666666 345556666666666666666666666663 555554
Q ss_pred cCCCCCCceeCcCCcceee
Q 046544 374 EKLSYLEDLNLSFNKLEGE 392 (646)
Q Consensus 374 ~~l~~L~~L~L~~N~l~~~ 392 (646)
. ++|+.|++++|++.+.
T Consensus 586 ~--~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 586 T--PNISVLDIKDNPNISI 602 (636)
T ss_dssp C--TTCCEEECCSCTTCEE
T ss_pred h--CcCCEEECcCCCCccc
Confidence 4 5666666666666653
No 10
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=8.2e-49 Score=440.19 Aligned_cols=396 Identities=18% Similarity=0.234 Sum_probs=341.4
Q ss_pred CCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcC-------------------------------------------
Q 046544 10 QNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSL------------------------------------------- 46 (646)
Q Consensus 10 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l------------------------------------------- 46 (646)
..++.|+|++|++++.+|.+|+++++|++|+|++|.+
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~ 160 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSD 160 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHH
Confidence 4788999999999999999999999999999999954
Q ss_pred -----------------------------------cccCCccCcCCCCCCCEEEccCCccccc-----------------
Q 046544 47 -----------------------------------LGCLSSIADVRLPNLEALLLWGNNFSGT----------------- 74 (646)
Q Consensus 47 -----------------------------------~~~~~~~~~~~l~~L~~L~L~~N~l~~~----------------- 74 (646)
++ +|. ....+++|++|+|++|++++.
T Consensus 161 ~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ 238 (636)
T 4eco_A 161 LIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSK-AVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQY 238 (636)
T ss_dssp HHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECG-GGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHH
T ss_pred HHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCH-HHhcccCCCEEECcCCccccccccccccccccchhccc
Confidence 23 222 123489999999999999985
Q ss_pred CCcccc--CCCCCcEEEcccCccccccCccccCcCCCCEEEccCCC-CCC--CCCcccccccCCCCCCCCEEECCCCCCC
Q 046544 75 IPRFIF--NASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNY-LTS--STPELSFLSSLSNCKSLTFIHLSDNPLD 149 (646)
Q Consensus 75 ~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~--~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 149 (646)
+|..++ ++++|++|+|++|.+.+..|..|+++++|++|+|++|+ ++. +|..+.....+..+++|++|++++|+++
T Consensus 239 ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 239 KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred CchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 899998 99999999999999999999999999999999999998 874 4333211112334599999999999999
Q ss_pred CcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCC-CCeEEeecccccCcCch
Q 046544 150 GILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQK-LQGLGLDDNKLEGSIPD 228 (646)
Q Consensus 150 ~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~ 228 (646)
.++....++.+ ++|++|++++|+++|.+| .+..+++|++|++++|++. .+|..+..+++ |++|++++|+++ .+|.
T Consensus 319 ~ip~~~~l~~l-~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~ 394 (636)
T 4eco_A 319 TFPVETSLQKM-KKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPN 394 (636)
T ss_dssp SCCCHHHHTTC-TTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCS
T ss_pred ccCchhhhccC-CCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccch
Confidence 76542245554 589999999999998888 9999999999999999999 77888999999 999999999999 7888
Q ss_pred hhcCCC--CCcEEEecCCcccccCCcccc-------CCCCCceeecCCCcccccccccc-cccccccccCCCCcccCCCC
Q 046544 229 SICRLT--ELYELELGGNKLFGSIPACFS-------NLASLRILSLSSNELTSIPLTFW-NLKDILQLNFSSNFLTGPLP 298 (646)
Q Consensus 229 ~~~~l~--~L~~L~L~~N~i~~~~~~~~~-------~l~~L~~L~L~~N~l~~lp~~~~-~l~~L~~L~l~~N~l~~~~~ 298 (646)
.+..++ +|++|++++|++.+..|..|. .+++|++|++++|.++.+|..++ .+++|+.|++++|.++...+
T Consensus 395 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~ 474 (636)
T 4eco_A 395 IFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPK 474 (636)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCS
T ss_pred hhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCH
Confidence 887765 899999999999999999888 88899999999999999998755 58999999999999995444
Q ss_pred CccCcc-------ccceEEEcccccccccCccccC--CCCCCCEEEccCccCCCcccccccCCCCCCEEEc------cCC
Q 046544 299 LEIGNL-------KVLIGIDFSMNNFSSVIPTEIG--GLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNL------SNN 363 (646)
Q Consensus 299 ~~~~~l-------~~L~~L~ls~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N 363 (646)
..+... ++|+.|++++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+| ++|
T Consensus 475 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N 552 (636)
T 4eco_A 475 NSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGN 552 (636)
T ss_dssp SSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCC
T ss_pred HHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccC
Confidence 444433 39999999999999 5677776 99999999999999997 8999999999999999 568
Q ss_pred cCcccCCccccCCCCCCceeCcCCcceeeccCCCCCCCCccccccCCccccC
Q 046544 364 NLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFAAESFEGNELLCG 415 (646)
Q Consensus 364 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~ 415 (646)
++.+.+|..+..+++|++|+|++|++ +.+|... .+.++.+++++|++.|-
T Consensus 553 ~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~-~~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 553 RTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKI-TPNISVLDIKDNPNISI 602 (636)
T ss_dssp BCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCC-CTTCCEEECCSCTTCEE
T ss_pred cccccChHHHhcCCCCCEEECCCCcC-CccCHhH-hCcCCEEECcCCCCccc
Confidence 88899999999999999999999999 5677653 38999999999999883
No 11
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=5.6e-48 Score=440.70 Aligned_cols=349 Identities=17% Similarity=0.223 Sum_probs=242.1
Q ss_pred CCCCCCEEEccCCcccc-----------------cCCcccc--CCCCCcEEEcccCccccccCccccCcCCCCEEEccCC
Q 046544 57 RLPNLEALLLWGNNFSG-----------------TIPRFIF--NASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDN 117 (646)
Q Consensus 57 ~l~~L~~L~L~~N~l~~-----------------~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 117 (646)
.+++|++|+|++|+|++ .+|..++ ++++|++|+|++|.+.+..|..|+++++|++|+|++|
T Consensus 446 ~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N 525 (876)
T 4ecn_A 446 RLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACN 525 (876)
T ss_dssp GCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTC
T ss_pred cCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCC
Confidence 46777888888888776 3677766 7777888888888777777777777888888888877
Q ss_pred C-CCC--CCCcccccc-cCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEc
Q 046544 118 Y-LTS--STPELSFLS-SLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDL 193 (646)
Q Consensus 118 ~-l~~--~~~~~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 193 (646)
+ ++. +|..+.... .+..+++|++|+|++|.++.++....++.+ ++|+.|+|++|.++ .+| .+..+++|+.|+|
T Consensus 526 ~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L-~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~L 602 (876)
T 4ecn_A 526 RGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKM-VKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKL 602 (876)
T ss_dssp TTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTC-TTCCEEECTTSCCC-BCC-CCCTTSEESEEEC
T ss_pred CCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcC-CCCCEEECCCCCcc-cch-hhcCCCcceEEEC
Confidence 7 654 333222111 445566788888888877755431234443 46777888888777 556 7777777888888
Q ss_pred cCCccccccCccccCCCC-CCeEEeecccccCcCchhhcCCCC--CcEEEecCCcccccCCccc---c--CCCCCceeec
Q 046544 194 GGNKLNGSIPITLSKLQK-LQGLGLDDNKLEGSIPDSICRLTE--LYELELGGNKLFGSIPACF---S--NLASLRILSL 265 (646)
Q Consensus 194 ~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~L~~N~i~~~~~~~~---~--~l~~L~~L~L 265 (646)
++|++. .+|..+..+++ |+.|+|++|+++ .+|..+..++. |+.|+|++|++.+.+|... . .+++|+.|+|
T Consensus 603 s~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~L 680 (876)
T 4ecn_A 603 DYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTL 680 (876)
T ss_dssp CSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEEC
T ss_pred cCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEc
Confidence 888777 66666777777 888888888777 56666666544 7788888887776555332 1 2347777888
Q ss_pred CCCcccccccccc-cccccccccCCCCcccCCCCCccCc-------cccceEEEcccccccccCccccC--CCCCCCEEE
Q 046544 266 SSNELTSIPLTFW-NLKDILQLNFSSNFLTGPLPLEIGN-------LKVLIGIDFSMNNFSSVIPTEIG--GLKNLEYLF 335 (646)
Q Consensus 266 ~~N~l~~lp~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~-------l~~L~~L~ls~N~l~~~~~~~~~--~l~~L~~L~ 335 (646)
++|.++.+|..++ .+++|+.|++++|.++...+..+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+
T Consensus 681 s~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~ 759 (876)
T 4ecn_A 681 SYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMD 759 (876)
T ss_dssp CSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEE
T ss_pred cCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEE
Confidence 8887777776554 6777778888887777333333322 237778888888777 4566665 777788888
Q ss_pred ccCccCCCcccccccCCCCCCEEEccC------CcCcccCCccccCCCCCCceeCcCCcceeeccCCCCCCCCccccccC
Q 046544 336 LGYNRLEGSIPDSFGDLISLKFLNLSN------NNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFAAESFEG 409 (646)
Q Consensus 336 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~ 409 (646)
|++|++++ +|..+..+++|+.|+|++ |++.+.+|..+..+++|+.|+|++|++ +.+|... .+.++.+++++
T Consensus 760 Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l-~~~L~~LdLs~ 836 (876)
T 4ecn_A 760 VSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKL-TPQLYILDIAD 836 (876)
T ss_dssp CCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCC-CSSSCEEECCS
T ss_pred eCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhh-cCCCCEEECCC
Confidence 88888775 577777777888887765 667777777777778888888888887 4566552 35777777777
Q ss_pred Ccccc
Q 046544 410 NELLC 414 (646)
Q Consensus 410 N~~~c 414 (646)
|++..
T Consensus 837 N~l~~ 841 (876)
T 4ecn_A 837 NPNIS 841 (876)
T ss_dssp CTTCE
T ss_pred CCCCc
Confidence 77644
No 12
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2e-46 Score=426.04 Aligned_cols=380 Identities=24% Similarity=0.230 Sum_probs=195.2
Q ss_pred CCccccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccC
Q 046544 2 IPLEISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFN 81 (646)
Q Consensus 2 ip~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 81 (646)
||..+. +++++|+|++|+++++.+.+|.++++|++|+|++|.+++..+. .+..+++|++|+|++|++++..+..|.+
T Consensus 19 ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~l~~~~~~~ 95 (680)
T 1ziw_A 19 VPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPE-LCQKLPMLKVLNLQHNELSQLSDKTFAF 95 (680)
T ss_dssp CCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTT-HHHHCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred cccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHH-HHhcccCcCEEECCCCccCccChhhhcc
Confidence 455443 5666666666666666666666666666666666666654333 1223666666666666666555556666
Q ss_pred CCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhcccc
Q 046544 82 ASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLS 161 (646)
Q Consensus 82 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 161 (646)
+++|++|+|++|.++++.|..|+++++|++|+|++|.++..++ ..+.++++|++|++++|.++++.+......-.
T Consensus 96 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~ 170 (680)
T 1ziw_A 96 CTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKL-----GTQVQLENLQELLLSNNKIQALKSEELDIFAN 170 (680)
T ss_dssp CTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCC-----CSSSCCTTCCEEECCSSCCCCBCHHHHGGGTT
T ss_pred CCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCc-----hhhcccccCCEEEccCCcccccCHHHhhcccc
Confidence 6666666666666666666666666666666666666665533 23556666666666666665554322111111
Q ss_pred ccCcEEEeecccccccCCcccccC---------------------------CCCCEEEccCCccccccCccccCCCC--C
Q 046544 162 HSLKDFYMSNCNVSGGIPEEITNL---------------------------TNSITIDLGGNKLNGSIPITLSKLQK--L 212 (646)
Q Consensus 162 ~~L~~L~L~~n~l~~~~p~~~~~l---------------------------~~L~~L~L~~N~l~~~~~~~~~~l~~--L 212 (646)
++|+.|++++|.+++..|..+..+ ++|+.|++++|++.+..|.+|.+++. |
T Consensus 171 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L 250 (680)
T 1ziw_A 171 SSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNL 250 (680)
T ss_dssp CEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCC
T ss_pred ccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCC
Confidence 345555555555555544444332 23344444444444444444444432 5
Q ss_pred CeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCcc---------------------------------ccCCCC
Q 046544 213 QGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPAC---------------------------------FSNLAS 259 (646)
Q Consensus 213 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~---------------------------------~~~l~~ 259 (646)
++|++++|++++..|.+|..+++|++|++++|++.+..|.. |..+++
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~ 330 (680)
T 1ziw_A 251 TMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKC 330 (680)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTT
T ss_pred CEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCC
Confidence 55555555544444444444455555555555444444444 445555
Q ss_pred CceeecCCCccccccc-ccccccccccccCCCCcccCC--CCCccCcc--ccceEEEcccccccccCccccCCCCCCCEE
Q 046544 260 LRILSLSSNELTSIPL-TFWNLKDILQLNFSSNFLTGP--LPLEIGNL--KVLIGIDFSMNNFSSVIPTEIGGLKNLEYL 334 (646)
Q Consensus 260 L~~L~L~~N~l~~lp~-~~~~l~~L~~L~l~~N~l~~~--~~~~~~~l--~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L 334 (646)
|++|++++|.++.++. .|.++++|++|++++|.+... .+..|..+ +.|+.|++++|+++++.|..|+.+++|++|
T Consensus 331 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 410 (680)
T 1ziw_A 331 LEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVL 410 (680)
T ss_dssp CCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEE
Confidence 5555555555554432 344444444444443332110 00111111 123333334444444445555555555555
Q ss_pred EccCccCCCccc-ccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcc
Q 046544 335 FLGYNRLEGSIP-DSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKL 389 (646)
Q Consensus 335 ~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 389 (646)
++++|++++.+| ..|.++++|++|++++|++++..+..|..+++|+.|++++|.+
T Consensus 411 ~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l 466 (680)
T 1ziw_A 411 DLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVAL 466 (680)
T ss_dssp ECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCC
T ss_pred eCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccc
Confidence 555555544333 4555555555555555555444444444444444444444443
No 13
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=6.9e-47 Score=424.06 Aligned_cols=389 Identities=21% Similarity=0.196 Sum_probs=319.9
Q ss_pred CccccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCC
Q 046544 3 PLEISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNA 82 (646)
Q Consensus 3 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 82 (646)
|..|+++++|++|+|++|+++++.|.+|.++++|++|+|++|.+++.++. .+..+++|++|+|++|.+++..+..|+++
T Consensus 49 ~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 127 (606)
T 3vq2_A 49 SYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPG-SFSGLTSLENLVAVETKLASLESFPIGQL 127 (606)
T ss_dssp TTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTT-SSTTCTTCCEEECTTSCCCCSSSSCCTTC
T ss_pred hhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChh-hcCCcccCCEEEccCCccccccccccCCC
Confidence 44788999999999999999988899999999999999999999875443 23358999999999999998887889999
Q ss_pred CCCcEEEcccCccccc-cCccccCcCCCCEEEccCCCCCCCCCcc-cc---------------------cccCCCCCCCC
Q 046544 83 SKLSILELSQNSFSGF-IPNTFGNLRNLEWLNLRDNYLTSSTPEL-SF---------------------LSSLSNCKSLT 139 (646)
Q Consensus 83 ~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~---------------------~~~l~~l~~L~ 139 (646)
++|++|+|++|.+.+. .|..|+++++|++|+|++|+++..++.. .. +.......+|+
T Consensus 128 ~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~ 207 (606)
T 3vq2_A 128 ITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLH 207 (606)
T ss_dssp TTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEE
T ss_pred CCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceee
Confidence 9999999999999864 4888999999999999999988765431 00 00011112455
Q ss_pred EEECCCCCCCCcCCc-----------------------------------------------------------------
Q 046544 140 FIHLSDNPLDGILSK----------------------------------------------------------------- 154 (646)
Q Consensus 140 ~L~Ls~N~l~~~~~~----------------------------------------------------------------- 154 (646)
+|++++|.+.+....
T Consensus 208 ~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L 287 (606)
T 3vq2_A 208 ELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANV 287 (606)
T ss_dssp EEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTC
T ss_pred eeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCC
Confidence 555555544200000
Q ss_pred -------------chhccccccCcEEEeecccccccCCc--------------------ccccCCCCCEEEccCCccccc
Q 046544 155 -------------TSIGNLSHSLKDFYMSNCNVSGGIPE--------------------EITNLTNSITIDLGGNKLNGS 201 (646)
Q Consensus 155 -------------~~~~~~~~~L~~L~L~~n~l~~~~p~--------------------~~~~l~~L~~L~L~~N~l~~~ 201 (646)
..+.. .++|++|++++|.+. .+|. .+..+++|++|++++|++++.
T Consensus 288 ~~L~l~~~~~~~l~~l~~-~~~L~~L~l~~n~l~-~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~ 365 (606)
T 3vq2_A 288 SAMSLAGVSIKYLEDVPK-HFKWQSLSIIRCQLK-QFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFS 365 (606)
T ss_dssp SEEEEESCCCCCCCCCCT-TCCCSEEEEESCCCS-SCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEE
T ss_pred CEEEecCccchhhhhccc-cccCCEEEcccccCc-ccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCC
Confidence 00000 125666666666663 3332 355678888889999999876
Q ss_pred c--CccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCC-ccccCCCCCceeecCCCcccc-ccccc
Q 046544 202 I--PITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIP-ACFSNLASLRILSLSSNELTS-IPLTF 277 (646)
Q Consensus 202 ~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~-lp~~~ 277 (646)
. |..+..+++|++|++++|.+.+ +|..|..+++|++|++++|++.+..| ..|.++++|++|++++|.++. .|..+
T Consensus 366 ~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 444 (606)
T 3vq2_A 366 GCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIF 444 (606)
T ss_dssp EECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTT
T ss_pred cchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhh
Confidence 3 8889999999999999999995 66889999999999999999998887 789999999999999999996 46778
Q ss_pred ccccccccccCCCCcccC-CCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCC
Q 046544 278 WNLKDILQLNFSSNFLTG-PLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLK 356 (646)
Q Consensus 278 ~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 356 (646)
..+++|+.|++++|.+++ ..|..++.+++|+.|++++|.+++..|..|+++++|++|++++|++++.+|..|..+++|+
T Consensus 445 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 524 (606)
T 3vq2_A 445 LGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLS 524 (606)
T ss_dssp TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCC
T ss_pred cCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCC
Confidence 999999999999999997 4789999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCcCcccCCccccCCC-CCCceeCcCCcceeeccCC
Q 046544 357 FLNLSNNNLSGAIPTSLEKLS-YLEDLNLSFNKLEGEIPRG 396 (646)
Q Consensus 357 ~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~ 396 (646)
+|+|++|+++ .+|..+..++ +|++|++++|++.|.++..
T Consensus 525 ~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 525 TLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp EEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred EEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 9999999999 6777799997 5999999999999988754
No 14
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=6.6e-47 Score=438.80 Aligned_cols=408 Identities=24% Similarity=0.200 Sum_probs=326.1
Q ss_pred CCCccccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCcccc
Q 046544 1 EIPLEISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIF 80 (646)
Q Consensus 1 ~ip~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 80 (646)
+||. -.+++++|||++|+|+++.|..|.++++|++|+|++|.+.+.++...+..+++|++|+|++|.|++..|..|.
T Consensus 18 ~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~ 94 (844)
T 3j0a_A 18 QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQ 94 (844)
T ss_dssp CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSC
T ss_pred CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHcc
Confidence 3665 4589999999999999999999999999999999999776556555556799999999999999999999999
Q ss_pred CCCCCcEEEcccCccccccCcc--ccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhc
Q 046544 81 NASKLSILELSQNSFSGFIPNT--FGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIG 158 (646)
Q Consensus 81 ~l~~L~~L~Ls~N~l~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 158 (646)
++++|++|+|++|.+++..|.. |+++++|++|+|++|.++..++ +..|+++++|++|++++|.++++.+.....
T Consensus 95 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~----~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~ 170 (844)
T 3j0a_A 95 GLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYL----HPSFGKLNSLKSIDFSSNQIFLVCEHELEP 170 (844)
T ss_dssp SCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCC----CGGGGTCSSCCEEEEESSCCCCCCSGGGHH
T ss_pred CCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCccccccc----chhHhhCCCCCEEECCCCcCCeeCHHHccc
Confidence 9999999999999999865554 9999999999999999988743 235889999999999999998765443211
Q ss_pred cccc------------------------------cCcEEEeecccccccCCccccc------------------------
Q 046544 159 NLSH------------------------------SLKDFYMSNCNVSGGIPEEITN------------------------ 184 (646)
Q Consensus 159 ~~~~------------------------------~L~~L~L~~n~l~~~~p~~~~~------------------------ 184 (646)
-..+ .|+.|++++|.+++..|..+..
T Consensus 171 l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~ 250 (844)
T 3j0a_A 171 LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFH 250 (844)
T ss_dssp HHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCS
T ss_pred ccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccc
Confidence 0001 2667777777665544443332
Q ss_pred --------------CCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccC
Q 046544 185 --------------LTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSI 250 (646)
Q Consensus 185 --------------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 250 (646)
.++|+.|++++|.+.+..|..|..+++|+.|+|++|++++..|.+|.++++|++|+|++|++.+..
T Consensus 251 ~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 330 (844)
T 3j0a_A 251 NIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELY 330 (844)
T ss_dssp SSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCC
T ss_pred ccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccC
Confidence 157888888888888888888888888999999999888888888888888999999999888888
Q ss_pred CccccCCCCCceeecCCCccccccc-ccccccccccccCCCCcccCCCC------------------C------------
Q 046544 251 PACFSNLASLRILSLSSNELTSIPL-TFWNLKDILQLNFSSNFLTGPLP------------------L------------ 299 (646)
Q Consensus 251 ~~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~l~~N~l~~~~~------------------~------------ 299 (646)
|..|.++++|+.|++++|.++.++. .|..+++|+.|++++|.+++... .
T Consensus 331 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~ 410 (844)
T 3j0a_A 331 SSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSE 410 (844)
T ss_dssp SCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCS
T ss_pred HHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeeccc
Confidence 8888888899999999998887765 57778888888888887764211 0
Q ss_pred ----------ccCccccceEEEcccccccccCcc-ccCCCCCCCEEEccCccCC-----CcccccccCCCCCCEEEccCC
Q 046544 300 ----------EIGNLKVLIGIDFSMNNFSSVIPT-EIGGLKNLEYLFLGYNRLE-----GSIPDSFGDLISLKFLNLSNN 363 (646)
Q Consensus 300 ----------~~~~l~~L~~L~ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N 363 (646)
.+..+++|+.|++++|++++..+. .+..+++|+.|+|++|.++ +..+..|.++++|+.|+|++|
T Consensus 411 N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N 490 (844)
T 3j0a_A 411 NRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHN 490 (844)
T ss_dssp CCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHH
T ss_pred CccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCC
Confidence 122556667777777777654433 3555677777777777775 344567889999999999999
Q ss_pred cCcccCCccccCCCCCCceeCcCCcceeeccCCCCCCCCccccccCCccccCC
Q 046544 364 NLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFAAESFEGNELLCGS 416 (646)
Q Consensus 364 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~ 416 (646)
++++..|..|..+++|+.|+|++|++++.+|.... ..++.+++++|.+..-.
T Consensus 491 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l~~~~ 542 (844)
T 3j0a_A 491 YLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQLLAPN 542 (844)
T ss_dssp HHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECCCCCC
T ss_pred cccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcCCCCC
Confidence 99999999999999999999999999986665544 88999999999876643
No 15
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=8.4e-46 Score=417.43 Aligned_cols=412 Identities=22% Similarity=0.246 Sum_probs=317.9
Q ss_pred CCCccccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCcccc
Q 046544 1 EIPLEISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIF 80 (646)
Q Consensus 1 ~ip~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 80 (646)
+||..+. +++++|||++|+|+++.+.+|.++++|++|+|++|+|++.++ .++..+++|++|+|++|+|++..++.|.
T Consensus 45 ~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~-~~f~~L~~L~~L~Ls~N~l~~l~~~~f~ 121 (635)
T 4g8a_A 45 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIED-GAYQSLSHLSTLILTGNPIQSLALGAFS 121 (635)
T ss_dssp SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECT-TTTTTCTTCCEEECTTCCCCEECGGGGT
T ss_pred ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcCh-hHhcCCCCCCEEEccCCcCCCCCHHHhc
Confidence 4666553 589999999999999999999999999999999999987444 4445699999999999999988889999
Q ss_pred CCCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchh--c
Q 046544 81 NASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSI--G 158 (646)
Q Consensus 81 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~--~ 158 (646)
++++|++|+|++|+|+++.+..|+++++|++|+|++|+++..+ .+..++++++|++|++++|+++++.+...- .
T Consensus 122 ~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 197 (635)
T 4g8a_A 122 GLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK----LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLH 197 (635)
T ss_dssp TCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCC----CCGGGGGCTTCCEEECCSSCCCEECGGGGHHHH
T ss_pred CCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCC----CchhhccchhhhhhcccCccccccccccccchh
Confidence 9999999999999999998889999999999999999998764 234578899999999999999877543211 1
Q ss_pred cccccCcEEEeecccccccCC-----------------------------------------------------------
Q 046544 159 NLSHSLKDFYMSNCNVSGGIP----------------------------------------------------------- 179 (646)
Q Consensus 159 ~~~~~L~~L~L~~n~l~~~~p----------------------------------------------------------- 179 (646)
.+......++++.|.+....+
T Consensus 198 ~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~ 277 (635)
T 4g8a_A 198 QMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEG 277 (635)
T ss_dssp TCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGG
T ss_pred hhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCccccccccccccccccccccccccccccc
Confidence 111111122222222211111
Q ss_pred --------------------------------------------cccccCCCCCEEEccCCccccccCcc----------
Q 046544 180 --------------------------------------------EEITNLTNSITIDLGGNKLNGSIPIT---------- 205 (646)
Q Consensus 180 --------------------------------------------~~~~~l~~L~~L~L~~N~l~~~~~~~---------- 205 (646)
..+....+++.|++++|.+....+..
T Consensus 278 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~ 357 (635)
T 4g8a_A 278 LCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFT 357 (635)
T ss_dssp GGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEE
T ss_pred ccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccc
Confidence 11222334455555555544332221
Q ss_pred ---------ccCCCCCCeEEeecccccC--cCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccc
Q 046544 206 ---------LSKLQKLQGLGLDDNKLEG--SIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIP 274 (646)
Q Consensus 206 ---------~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp 274 (646)
+..+++|+.|++++|.+.. ..+..+..+.+|+.|+++.|.+.. .+..+..+++|+.+++++|.....+
T Consensus 358 ~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~ 436 (635)
T 4g8a_A 358 SNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMS 436 (635)
T ss_dssp SCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTT
T ss_pred cccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhccccccc
Confidence 1234455566666665532 334455556666666666666553 3455777888888888888776543
Q ss_pred --cccccccccccccCCCCcccCCCCCccCccccceEEEcccccc-cccCccccCCCCCCCEEEccCccCCCcccccccC
Q 046544 275 --LTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNF-SSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGD 351 (646)
Q Consensus 275 --~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 351 (646)
..|..+++++.++++.|.+.+..+..+..++.|+.|++++|.+ .+..|..|..+++|++|+|++|++++.+|..|.+
T Consensus 437 ~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~ 516 (635)
T 4g8a_A 437 EFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS 516 (635)
T ss_dssp SSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcC
Confidence 3577889999999999999999999999999999999999974 4567889999999999999999999999999999
Q ss_pred CCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccCCC-CC-CCCccccccCCccccCCCCcc
Q 046544 352 LISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRGG-SF-GNFAAESFEGNELLCGSPTLQ 420 (646)
Q Consensus 352 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~-~~~~~~~~~~N~~~c~~~~~~ 420 (646)
+++|++|+|++|+|++..|..|..+++|++|||++|++++.+|... .+ ++++.+++++|||.|+|...+
T Consensus 517 l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~ 587 (635)
T 4g8a_A 517 LSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQS 587 (635)
T ss_dssp CTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHH
T ss_pred CCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHH
Confidence 9999999999999999999999999999999999999999888763 34 689999999999999997643
No 16
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.6e-46 Score=416.00 Aligned_cols=398 Identities=22% Similarity=0.249 Sum_probs=302.4
Q ss_pred CCCccccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCcccc
Q 046544 1 EIPLEISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIF 80 (646)
Q Consensus 1 ~ip~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 80 (646)
+||..+. ++|++|+|++|+++++.|.+|.++++|++|+|++|++++.++. .+..+++|++|+|++|++++..|..|.
T Consensus 19 ~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 95 (549)
T 2z81_A 19 SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD-AFYSLGSLEHLDLSDNHLSSLSSSWFG 95 (549)
T ss_dssp SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT-TTTTCTTCCEEECTTSCCCSCCHHHHT
T ss_pred cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh-hccccccCCEEECCCCccCccCHHHhc
Confidence 3666654 7899999999999888888899999999999999998875543 233588999999999999888777788
Q ss_pred CCCCCcEEEcccCccccc-cCccccCcCCCCEEEccCCC-CCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhc
Q 046544 81 NASKLSILELSQNSFSGF-IPNTFGNLRNLEWLNLRDNY-LTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIG 158 (646)
Q Consensus 81 ~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 158 (646)
++++|++|+|++|.++++ .|..|+++++|++|++++|. +..+++ ..|.++++|++|++++|.+++..+.. +.
T Consensus 96 ~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~-----~~~~~l~~L~~L~L~~n~l~~~~~~~-l~ 169 (549)
T 2z81_A 96 PLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRR-----IDFAGLTSLNELEIKALSLRNYQSQS-LK 169 (549)
T ss_dssp TCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT-----TTTTTCCEEEEEEEEETTCCEECTTT-TT
T ss_pred cCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCH-----hhhhcccccCeeeccCCcccccChhh-hh
Confidence 899999999999998864 46778889999999999987 444432 35778888888888888887654332 11
Q ss_pred c-----------------------ccccCcEEEeecccccccC--C-cccccCCCCCEEEccCCccccccCc--------
Q 046544 159 N-----------------------LSHSLKDFYMSNCNVSGGI--P-EEITNLTNSITIDLGGNKLNGSIPI-------- 204 (646)
Q Consensus 159 ~-----------------------~~~~L~~L~L~~n~l~~~~--p-~~~~~l~~L~~L~L~~N~l~~~~~~-------- 204 (646)
. ..++|++|++++|++++.. | .....+++|+.|++++|.+.+..+.
T Consensus 170 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~ 249 (549)
T 2z81_A 170 SIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRY 249 (549)
T ss_dssp TCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGG
T ss_pred ccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhh
Confidence 1 1245666666666666531 1 1112233333333333332211000
Q ss_pred -------------------------------------------------------cccCCCCCCeEEeecccccCcCchh
Q 046544 205 -------------------------------------------------------TLSKLQKLQGLGLDDNKLEGSIPDS 229 (646)
Q Consensus 205 -------------------------------------------------------~~~~l~~L~~L~L~~N~l~~~~~~~ 229 (646)
.+...++|+.|++++|.+. .+|..
T Consensus 250 ~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~ 328 (549)
T 2z81_A 250 ILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCS 328 (549)
T ss_dssp CTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHH
T ss_pred hccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHH
Confidence 0112246777888888877 45555
Q ss_pred h-cCCCCCcEEEecCCcccccCC---ccccCCCCCceeecCCCccccccc---ccccccccccccCCCCcccCCCCCccC
Q 046544 230 I-CRLTELYELELGGNKLFGSIP---ACFSNLASLRILSLSSNELTSIPL---TFWNLKDILQLNFSSNFLTGPLPLEIG 302 (646)
Q Consensus 230 ~-~~l~~L~~L~L~~N~i~~~~~---~~~~~l~~L~~L~L~~N~l~~lp~---~~~~l~~L~~L~l~~N~l~~~~~~~~~ 302 (646)
+ ..+++|++|++++|++.+..| ..++.+++|++|++++|+++.+|. .+..+++|++|++++|.++ .+|..+.
T Consensus 329 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~ 407 (549)
T 2z81_A 329 FSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQ 407 (549)
T ss_dssp HHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCC
T ss_pred HHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhc
Confidence 5 679999999999999987664 347889999999999999998863 4788999999999999998 5788899
Q ss_pred ccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCce
Q 046544 303 NLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDL 382 (646)
Q Consensus 303 ~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 382 (646)
.+++|+.|++++|.++++ |..+ .++|++|++++|++++.+ ..+++|++|+|++|+|+ .+|. ...+++|++|
T Consensus 408 ~~~~L~~L~Ls~N~l~~l-~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L 478 (549)
T 2z81_A 408 WPEKMRFLNLSSTGIRVV-KTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVM 478 (549)
T ss_dssp CCTTCCEEECTTSCCSCC-CTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEE
T ss_pred ccccccEEECCCCCcccc-cchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEE
Confidence 999999999999999864 3333 268999999999998653 57899999999999998 6676 4679999999
Q ss_pred eCcCCcceeeccCC-CCCCCCccccccCCccccCCCC
Q 046544 383 NLSFNKLEGEIPRG-GSFGNFAAESFEGNELLCGSPT 418 (646)
Q Consensus 383 ~L~~N~l~~~~p~~-~~~~~~~~~~~~~N~~~c~~~~ 418 (646)
+|++|++++.+|.. ..+..++.+++++|+|.|+|+.
T Consensus 479 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 479 KISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp ECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred ecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 99999999987764 5688999999999999998873
No 17
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.2e-46 Score=426.29 Aligned_cols=380 Identities=19% Similarity=0.211 Sum_probs=308.0
Q ss_pred CCcCccCCCCCCEEECcCCcCcc------------------cCCccCcCCCCCCCEEEccCCcccccCCccccCCCCCcE
Q 046544 26 VPAAIFNMSMLKLLHLQNNSLLG------------------CLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKLSI 87 (646)
Q Consensus 26 ~~~~~~~l~~L~~L~L~~N~l~~------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 87 (646)
+|..|.++++|++|+|++|+|++ .++.+.+..+++|++|+|++|++.+.+|..|+++++|++
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 67889999999999999999988 455565446899999999999999999999999999999
Q ss_pred EEcccCc-ccc-ccCccccCcC-------CCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhc
Q 046544 88 LELSQNS-FSG-FIPNTFGNLR-------NLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIG 158 (646)
Q Consensus 88 L~Ls~N~-l~~-~~~~~~~~l~-------~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 158 (646)
|+|++|+ +++ ..|..|+.++ +|++|+|++|+++.+|. ...++++++|++|+|++|++..++ .++
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~----~~~l~~L~~L~~L~Ls~N~l~~lp---~~~ 592 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPA----SASLQKMVKLGLLDCVHNKVRHLE---AFG 592 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCC----HHHHTTCTTCCEEECTTSCCCBCC---CCC
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCC----hhhhhcCCCCCEEECCCCCcccch---hhc
Confidence 9999998 887 6777666655 99999999999986543 015788999999999999998654 333
Q ss_pred cccccCcEEEeecccccccCCcccccCCC-CCEEEccCCccccccCccccCCCC--CCeEEeecccccCcCchhh---c-
Q 046544 159 NLSHSLKDFYMSNCNVSGGIPEEITNLTN-SITIDLGGNKLNGSIPITLSKLQK--LQGLGLDDNKLEGSIPDSI---C- 231 (646)
Q Consensus 159 ~~~~~L~~L~L~~n~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~L~~N~l~~~~~~~~---~- 231 (646)
.+ ++|+.|+|++|.++ .+|..+..+++ |+.|+|++|+++ .+|..+..++. |+.|+|++|++.+.+|... .
T Consensus 593 ~L-~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~ 669 (876)
T 4ecn_A 593 TN-VKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDD 669 (876)
T ss_dssp TT-SEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTT
T ss_pred CC-CcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhcc
Confidence 33 57999999999999 77888999998 999999999998 66777777654 9999999999987665432 2
Q ss_pred -CCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccccccccc--------cccccccCCCCcccCCCCCccC
Q 046544 232 -RLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNL--------KDILQLNFSSNFLTGPLPLEIG 302 (646)
Q Consensus 232 -~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l--------~~L~~L~l~~N~l~~~~~~~~~ 302 (646)
.+++|+.|+|++|++..+.+..+..+++|+.|+|++|.|+.+|..++.. ++|+.|++++|.++ .+|..+.
T Consensus 670 ~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~ 748 (876)
T 4ecn_A 670 YKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFR 748 (876)
T ss_dssp CCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGS
T ss_pred ccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhh
Confidence 3458999999999998555555668899999999999999998765543 38999999999998 6777776
Q ss_pred --ccccceEEEcccccccccCccccCCCCCCCEEEccC------ccCCCcccccccCCCCCCEEEccCCcCcccCCcccc
Q 046544 303 --NLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGY------NRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLE 374 (646)
Q Consensus 303 --~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 374 (646)
.+++|+.|+|++|.+++ +|..++.+++|+.|+|++ |++.+.+|..|..+++|+.|+|++|++ +.+|..+.
T Consensus 749 ~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~ 826 (876)
T 4ecn_A 749 ATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT 826 (876)
T ss_dssp TTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC
T ss_pred hccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc
Confidence 89999999999999997 688888999999999976 778888999999999999999999999 57887765
Q ss_pred CCCCCCceeCcCCcceeeccCCC-CCCCCccccccCCcccc--CCCCcc
Q 046544 375 KLSYLEDLNLSFNKLEGEIPRGG-SFGNFAAESFEGNELLC--GSPTLQ 420 (646)
Q Consensus 375 ~l~~L~~L~L~~N~l~~~~p~~~-~~~~~~~~~~~~N~~~c--~~~~~~ 420 (646)
++|+.|+|++|++....+... .........+.+|++.| +|+...
T Consensus 827 --~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~I~gC~~L~ 873 (876)
T 4ecn_A 827 --PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQDIRGCDALG 873 (876)
T ss_dssp --SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSEEESCGGGC
T ss_pred --CCCCEEECCCCCCCccChHHccccccchheeecCCCccccCCCCCcc
Confidence 689999999999987554331 12234445666776655 777654
No 18
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-45 Score=407.65 Aligned_cols=391 Identities=21% Similarity=0.206 Sum_probs=312.0
Q ss_pred CCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEc
Q 046544 11 NLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKLSILEL 90 (646)
Q Consensus 11 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 90 (646)
.....+-++.+++. +|..+. +++++|+|++|.+++..+ ..+..+++|++|+|++|++++..|..|.++++|++|+|
T Consensus 8 ~~~~~~c~~~~l~~-ip~~l~--~~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 83 (570)
T 2z63_A 8 PNITYQCMELNFYK-IPDNLP--FSTKNLDLSFNPLRHLGS-YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLIL 83 (570)
T ss_dssp TTTEEECCSSCCSS-CCSSSC--SSCCEEECCSCCCCEECT-TTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCcEEEeCCCCccc-cCCCcc--ccccEEEccCCccCccCh-hHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeC
Confidence 35678888888884 555543 579999999999987544 34446999999999999999998999999999999999
Q ss_pred ccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEee
Q 046544 91 SQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMS 170 (646)
Q Consensus 91 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~ 170 (646)
++|.++++.|.+|+++++|++|++++|+++.+++. .++++++|++|++++|.+.++.-...++++ ++|++|+++
T Consensus 84 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~-----~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l-~~L~~L~l~ 157 (570)
T 2z63_A 84 TGNPIQSLALGAFSGLSSLQKLVAVETNLASLENF-----PIGHLKTLKELNVAHNLIQSFKLPEYFSNL-TNLEHLDLS 157 (570)
T ss_dssp TTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTC-----SCTTCTTCCEEECCSSCCCCCCCCGGGGGC-TTCCEEECT
T ss_pred cCCcCCccCHhhhcCccccccccccccccccCCCc-----cccccccccEEecCCCccceecChhhhccc-CCCCEEeCc
Confidence 99999999999999999999999999999987643 488999999999999999875433345544 589999999
Q ss_pred cccccccCCcccccCCCC----CEEEccCCccccccCcccc---------------------------------------
Q 046544 171 NCNVSGGIPEEITNLTNS----ITIDLGGNKLNGSIPITLS--------------------------------------- 207 (646)
Q Consensus 171 ~n~l~~~~p~~~~~l~~L----~~L~L~~N~l~~~~~~~~~--------------------------------------- 207 (646)
+|.+++..|..+..+++| +.|++++|.+.+..|..|.
T Consensus 158 ~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~ 237 (570)
T 2z63_A 158 SNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEF 237 (570)
T ss_dssp TSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEEC
T ss_pred CCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccc
Confidence 999999888999988888 8899999988776665443
Q ss_pred ------------------------------------------CCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCc
Q 046544 208 ------------------------------------------KLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNK 245 (646)
Q Consensus 208 ------------------------------------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 245 (646)
.+++|++|++++|.+. .+|..+..+ +|++|++++|.
T Consensus 238 ~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~ 315 (570)
T 2z63_A 238 RNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCK 315 (570)
T ss_dssp CCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCB
T ss_pred cCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCc
Confidence 3455666666666665 355555555 55555555555
Q ss_pred ccccCCccc-------------------cCCCCCceeecCCCccccc---ccccccccccccccCCCCcccCCCCCccCc
Q 046544 246 LFGSIPACF-------------------SNLASLRILSLSSNELTSI---PLTFWNLKDILQLNFSSNFLTGPLPLEIGN 303 (646)
Q Consensus 246 i~~~~~~~~-------------------~~l~~L~~L~L~~N~l~~l---p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 303 (646)
+.......+ ..+++|+.|++++|.++.+ |..+..+++|+.|++++|.+.+..+. +..
T Consensus 316 ~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~ 394 (570)
T 2z63_A 316 FGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLG 394 (570)
T ss_dssp CSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EET
T ss_pred ccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccc
Confidence 542222111 4567777788888877755 45677788888888888888765444 888
Q ss_pred cccceEEEcccccccccCc-cccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCc-ccCCccccCCCCCCc
Q 046544 304 LKVLIGIDFSMNNFSSVIP-TEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLS-GAIPTSLEKLSYLED 381 (646)
Q Consensus 304 l~~L~~L~ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~ 381 (646)
+++|+.|++++|.+++..| ..|..+++|++|++++|++.+..|..|..+++|++|++++|+++ +.+|..+..+++|++
T Consensus 395 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~ 474 (570)
T 2z63_A 395 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474 (570)
T ss_dssp CTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred cCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCE
Confidence 8999999999999887766 57888999999999999998888889999999999999999987 578889999999999
Q ss_pred eeCcCCcceeeccCC-CCCCCCccccccCCcccc
Q 046544 382 LNLSFNKLEGEIPRG-GSFGNFAAESFEGNELLC 414 (646)
Q Consensus 382 L~L~~N~l~~~~p~~-~~~~~~~~~~~~~N~~~c 414 (646)
|++++|++++..|.. ..+++++.+++++|.+..
T Consensus 475 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 508 (570)
T 2z63_A 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS 508 (570)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred EECCCCccccCChhhhhcccCCCEEeCCCCcCCC
Confidence 999999999876755 557888999999987654
No 19
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-45 Score=405.16 Aligned_cols=398 Identities=21% Similarity=0.242 Sum_probs=294.7
Q ss_pred CCCccccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCcccc
Q 046544 1 EIPLEISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIF 80 (646)
Q Consensus 1 ~ip~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 80 (646)
+||..+. ++|++|+|++|+|+++.|.+|.++++|++|+|++|+|++..+. .+..+++|++|+|++|+|++ +|..
T Consensus 14 ~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~-- 87 (520)
T 2z7x_B 14 HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDIS-VFKFNQELEYLDLSHNKLVK-ISCH-- 87 (520)
T ss_dssp SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGG-GGTTCTTCCEEECCSSCCCE-EECC--
T ss_pred ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChH-HhhcccCCCEEecCCCceee-cCcc--
Confidence 3677666 7888888888888887778888888888888888888775443 22358888888888888884 4444
Q ss_pred CCCCCcEEEcccCccccc-cCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCC--CEEECCCCCC--CCcCCcc
Q 046544 81 NASKLSILELSQNSFSGF-IPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSL--TFIHLSDNPL--DGILSKT 155 (646)
Q Consensus 81 ~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L--~~L~Ls~N~l--~~~~~~~ 155 (646)
.+++|++|+|++|.++++ .|..|+++++|++|+|++|+++.. .+.++++| ++|++++|.+ .+..+..
T Consensus 88 ~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~--------~~~~l~~L~L~~L~l~~n~l~~~~~~~~~ 159 (520)
T 2z7x_B 88 PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS--------SVLPIAHLNISKVLLVLGETYGEKEDPEG 159 (520)
T ss_dssp CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG--------GGGGGTTSCEEEEEEEECTTTTSSCCTTT
T ss_pred ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccchh--------hccccccceeeEEEeeccccccccccccc
Confidence 788888888888888874 577888888888888888888652 35556666 8888888888 3332221
Q ss_pred hhccc-------------------------cccCcEEEeeccc-------ccccCCcccccCC-----------------
Q 046544 156 SIGNL-------------------------SHSLKDFYMSNCN-------VSGGIPEEITNLT----------------- 186 (646)
Q Consensus 156 ~~~~~-------------------------~~~L~~L~L~~n~-------l~~~~p~~~~~l~----------------- 186 (646)
+..+ .++|+.+++++|. +.+.+| .+..++
T Consensus 160 -l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~ 237 (520)
T 2z7x_B 160 -LQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSF 237 (520)
T ss_dssp -TTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHH
T ss_pred -ccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHH
Confidence 1111 1234444444443 222222 233333
Q ss_pred ----------CCCEEEccCCccccccCccc-----cCCCCCCeEEeecccccCcCchhhcCC---CCCcEEEecCCcccc
Q 046544 187 ----------NSITIDLGGNKLNGSIPITL-----SKLQKLQGLGLDDNKLEGSIPDSICRL---TELYELELGGNKLFG 248 (646)
Q Consensus 187 ----------~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~N~i~~ 248 (646)
+|++|++++|++.+..|..+ .++++|+.+++++|.+ ...+..+..+ ++|+.|++++|.+..
T Consensus 238 ~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n~l~~ 316 (520)
T 2z7x_B 238 IRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGTRMVH 316 (520)
T ss_dssp HHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEESSCCCC
T ss_pred HHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcccccCceeEEEcCCCcccc
Confidence 55555566666655555555 5566666666666666 2222344333 557777777777653
Q ss_pred cCCccccCCCCCceeecCCCcccc-cccccccccccccccCCCCcccC--CCCCccCccccceEEEcccccccccCc-cc
Q 046544 249 SIPACFSNLASLRILSLSSNELTS-IPLTFWNLKDILQLNFSSNFLTG--PLPLEIGNLKVLIGIDFSMNNFSSVIP-TE 324 (646)
Q Consensus 249 ~~~~~~~~l~~L~~L~L~~N~l~~-lp~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~ls~N~l~~~~~-~~ 324 (646)
.. .+..+++|++|++++|.++. +|..+..+++|+.|++++|.+++ ..|..++.+++|+.|++++|.+++..| ..
T Consensus 317 ~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~ 394 (520)
T 2z7x_B 317 ML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGD 394 (520)
T ss_dssp CC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCS
T ss_pred cc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccch
Confidence 22 13688999999999999996 68889999999999999999986 456779999999999999999998444 46
Q ss_pred cCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccC-CCCCCCCc
Q 046544 325 IGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPR-GGSFGNFA 403 (646)
Q Consensus 325 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~~~~~ 403 (646)
|..+++|++|++++|++++..|..+. ++|+.|+|++|+++ .+|..+..+++|++|++++|++++.++. ...++.++
T Consensus 395 ~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~ 471 (520)
T 2z7x_B 395 CSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQ 471 (520)
T ss_dssp CCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCccc
Confidence 89999999999999999888887765 79999999999999 7888888999999999999999964444 45678899
Q ss_pred cccccCCccccCCCCcc
Q 046544 404 AESFEGNELLCGSPTLQ 420 (646)
Q Consensus 404 ~~~~~~N~~~c~~~~~~ 420 (646)
.+++++|++.|+|+..+
T Consensus 472 ~L~l~~N~~~c~c~~~~ 488 (520)
T 2z7x_B 472 KIWLHTNPWDCSCPRID 488 (520)
T ss_dssp EEECCSSCBCCCHHHHH
T ss_pred EEECcCCCCcccCCchH
Confidence 99999999999887543
No 20
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5.3e-45 Score=394.18 Aligned_cols=374 Identities=22% Similarity=0.224 Sum_probs=225.6
Q ss_pred EEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccc-cCCccccCCCCCcEEEccc
Q 046544 14 ELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSG-TIPRFIFNASKLSILELSQ 92 (646)
Q Consensus 14 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~ 92 (646)
.++.++++++. +|. + .++|++|+|++|.|++..+. .+..+++|++|+|++|.+.+ ..+..|.++++|++|+|++
T Consensus 14 ~~~c~~~~l~~-lp~-l--~~~l~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 14 NAICINRGLHQ-VPE-L--PAHVNYVDLSLNSIAELNET-SFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp EEECCSSCCSS-CCC-C--CTTCCEEECCSSCCCEECTT-TTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred ccCcCCCCccc-CCC-C--CCccCEEEecCCccCcCChh-HhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 45555555553 222 1 14555555555555543222 11235555555555555542 2344555555666666666
Q ss_pred CccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEeecc
Q 046544 93 NSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNC 172 (646)
Q Consensus 93 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n 172 (646)
|+++++.|..|+++++|++|+|++|+++...+ ....|.++++|++|++++|++.++.+...+..+ ++|++|++++|
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l-~~L~~L~L~~n 164 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVL---SGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNM-RRFHVLDLTFN 164 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHH---HSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGC-TTCCEEECTTC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCcccc---CcccccCcccCCEEECCCCccCccCcccccCCC-CcccEEeCCCC
Confidence 66555555555556666666666665544210 011255555666666666665555443333332 35666666666
Q ss_pred cccccCCcccccC--CCCCEEEccCCccccccCccc--------cCCCCCCeEEeecccccCcCchhhcCC---CCCcEE
Q 046544 173 NVSGGIPEEITNL--TNSITIDLGGNKLNGSIPITL--------SKLQKLQGLGLDDNKLEGSIPDSICRL---TELYEL 239 (646)
Q Consensus 173 ~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~~--------~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L 239 (646)
.+++..|..+..+ .+++.|++++|.+.+..+..+ ..+++|++|++++|++.+..|..+... ++|+.|
T Consensus 165 ~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L 244 (455)
T 3v47_A 165 KVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSL 244 (455)
T ss_dssp CBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEE
T ss_pred cccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeE
Confidence 6666666666555 567777777777766554432 355677888888888777777766554 677888
Q ss_pred EecCCccccc----------CCccccCC--CCCceeecCCCccccc-ccccccccccccccCCCCcccCCCCCccCcccc
Q 046544 240 ELGGNKLFGS----------IPACFSNL--ASLRILSLSSNELTSI-PLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKV 306 (646)
Q Consensus 240 ~L~~N~i~~~----------~~~~~~~l--~~L~~L~L~~N~l~~l-p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 306 (646)
++++|.+.+. .+..+.++ ++|+.|++++|.++.+ |..+..+++|+.|++++|.+++..|..|..+++
T Consensus 245 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 324 (455)
T 3v47_A 245 ILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTH 324 (455)
T ss_dssp ECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred eeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCccc
Confidence 8887765432 12222222 4677777777776644 445666667777777777776666666777777
Q ss_pred ceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcC
Q 046544 307 LIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSF 386 (646)
Q Consensus 307 L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 386 (646)
|+.|++++|.+++..|..|+++++|++|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|++|++++
T Consensus 325 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 404 (455)
T 3v47_A 325 LLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHT 404 (455)
T ss_dssp CCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccC
Confidence 77777777777766667777777777777777777766677777777777777777777765555667777777777777
Q ss_pred CcceeeccCC
Q 046544 387 NKLEGEIPRG 396 (646)
Q Consensus 387 N~l~~~~p~~ 396 (646)
|+++|.+|..
T Consensus 405 N~l~~~~~~~ 414 (455)
T 3v47_A 405 NPWDCSCPRI 414 (455)
T ss_dssp SCBCCCTTTT
T ss_pred CCcccCCCcc
Confidence 7777766643
No 21
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=7e-45 Score=402.89 Aligned_cols=383 Identities=22% Similarity=0.233 Sum_probs=306.0
Q ss_pred CccccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCccccc-CCccccC
Q 046544 3 PLEISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGT-IPRFIFN 81 (646)
Q Consensus 3 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~ 81 (646)
|..|+++++|++|+|++|+++++.|.+|.++++|++|+|++|.+++.++. .+..+++|++|+|++|++++. .|..+.+
T Consensus 43 ~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~ 121 (549)
T 2z81_A 43 HGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSS-WFGPLSSLKYLNLMGNPYQTLGVTSLFPN 121 (549)
T ss_dssp SSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHH-HHTTCTTCCEEECTTCCCSSSCSSCSCTT
T ss_pred hhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHH-HhccCCCCcEEECCCCcccccchhhhhhc
Confidence 67799999999999999999999999999999999999999999876554 123589999999999999863 5678999
Q ss_pred CCCCcEEEcccCc-cccccCccccCcCCCCEEEccCCCCCCCCCcc-cccc------------------cCCCCCCCCEE
Q 046544 82 ASKLSILELSQNS-FSGFIPNTFGNLRNLEWLNLRDNYLTSSTPEL-SFLS------------------SLSNCKSLTFI 141 (646)
Q Consensus 82 l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~~------------------~l~~l~~L~~L 141 (646)
+++|++|++++|. +..+.+..|.++++|++|++++|+++...+.. .... .+..+++|++|
T Consensus 122 l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 201 (549)
T 2z81_A 122 LTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYL 201 (549)
T ss_dssp CTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEE
T ss_pred cCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEE
Confidence 9999999999998 56666678999999999999999988643321 0000 01347889999
Q ss_pred ECCCCCCCCcCCc-chhcccccc----------------------------CcEEEeecccccccC--------------
Q 046544 142 HLSDNPLDGILSK-TSIGNLSHS----------------------------LKDFYMSNCNVSGGI-------------- 178 (646)
Q Consensus 142 ~Ls~N~l~~~~~~-~~~~~~~~~----------------------------L~~L~L~~n~l~~~~-------------- 178 (646)
++++|++++.... ..+.....+ |+.+++++|.+.+..
T Consensus 202 ~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~ 281 (549)
T 2z81_A 202 ELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELG 281 (549)
T ss_dssp EEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCT
T ss_pred EccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhc
Confidence 9999998875211 111111233 444444444443310
Q ss_pred ---------------------CcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCch---hhcCCC
Q 046544 179 ---------------------PEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPD---SICRLT 234 (646)
Q Consensus 179 ---------------------p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---~~~~l~ 234 (646)
+..+...++|+.|++++|++..++...+.++++|++|++++|++.+..|. .+..++
T Consensus 282 ~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~ 361 (549)
T 2z81_A 282 KVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWP 361 (549)
T ss_dssp TCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSST
T ss_pred ccccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccc
Confidence 01122345788899999998844334446899999999999999987653 378899
Q ss_pred CCcEEEecCCcccccCC--ccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEc
Q 046544 235 ELYELELGGNKLFGSIP--ACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDF 312 (646)
Q Consensus 235 ~L~~L~L~~N~i~~~~~--~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 312 (646)
+|++|+|++|++++..+ ..+..+++|++|++++|+++.+|..+..+++|++|++++|.+++ +|..+ .++|+.|++
T Consensus 362 ~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~L 438 (549)
T 2z81_A 362 SLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDV 438 (549)
T ss_dssp TCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEEC
T ss_pred cCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCccCChhhcccccccEEECCCCCccc-ccchh--cCCceEEEC
Confidence 99999999999986643 56899999999999999999999999999999999999999985 34333 268999999
Q ss_pred ccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceee
Q 046544 313 SMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGE 392 (646)
Q Consensus 313 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 392 (646)
++|++++.. ..+++|++|+|++|+++ .+|. ...+++|+.|+|++|++++..|..+..+++|+.|++++|+++|.
T Consensus 439 s~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 439 SNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp CSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred CCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 999999753 57899999999999999 5665 46799999999999999999999999999999999999999999
Q ss_pred ccC
Q 046544 393 IPR 395 (646)
Q Consensus 393 ~p~ 395 (646)
+|.
T Consensus 513 ~~~ 515 (549)
T 2z81_A 513 CPR 515 (549)
T ss_dssp HHH
T ss_pred Ccc
Confidence 884
No 22
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3e-44 Score=398.52 Aligned_cols=182 Identities=22% Similarity=0.289 Sum_probs=153.8
Q ss_pred CCCcEEEecCCcccccCCccccCCCCCceeecCCCcccc-cccccccccccccccCCCCcccCCC--CCccCccccceEE
Q 046544 234 TELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTS-IPLTFWNLKDILQLNFSSNFLTGPL--PLEIGNLKVLIGI 310 (646)
Q Consensus 234 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-lp~~~~~l~~L~~L~l~~N~l~~~~--~~~~~~l~~L~~L 310 (646)
.+|++|++++|.+.... .+..+++|++|++++|.++. +|..+..+++|+.|++++|.+++.. |..+..+++|+.|
T Consensus 331 ~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L 408 (562)
T 3a79_B 331 MNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETL 408 (562)
T ss_dssp CCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEE
T ss_pred CcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEE
Confidence 45778888888775322 23788999999999999996 6788999999999999999998743 4678999999999
Q ss_pred Ecccccccc-cCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcc
Q 046544 311 DFSMNNFSS-VIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKL 389 (646)
Q Consensus 311 ~ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 389 (646)
++++|.+++ +.+..|..+++|++|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|++|+|++|++
T Consensus 409 ~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l 485 (562)
T 3a79_B 409 DVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQL 485 (562)
T ss_dssp ECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCC
T ss_pred ECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCC
Confidence 999999998 5555689999999999999999887776665 79999999999999 6777777999999999999999
Q ss_pred eeeccC-CCCCCCCccccccCCccccCCCCcc
Q 046544 390 EGEIPR-GGSFGNFAAESFEGNELLCGSPTLQ 420 (646)
Q Consensus 390 ~~~~p~-~~~~~~~~~~~~~~N~~~c~~~~~~ 420 (646)
++.++. ...++.++.+++++|||.|+|+..+
T Consensus 486 ~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~ 517 (562)
T 3a79_B 486 KSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIR 517 (562)
T ss_dssp CCCCTTSTTTCTTCCCEECCSCCBCCCHHHHH
T ss_pred CCCCHHHHhcCCCCCEEEecCCCcCCCcchHH
Confidence 965444 4568889999999999999887543
No 23
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4.7e-44 Score=386.78 Aligned_cols=372 Identities=20% Similarity=0.169 Sum_probs=324.1
Q ss_pred CCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEcccCccc-cccCccccCcCCCCEEEc
Q 046544 36 LKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFS-GFIPNTFGNLRNLEWLNL 114 (646)
Q Consensus 36 L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L 114 (646)
-+.++.+++.++..+. + .++|++|+|++|.|++..|..|.++++|++|+|++|.+. .+.+..|.++++|++|+|
T Consensus 12 ~~~~~c~~~~l~~lp~-l----~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~L 86 (455)
T 3v47_A 12 GYNAICINRGLHQVPE-L----PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKL 86 (455)
T ss_dssp TTEEECCSSCCSSCCC-C----CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEEC
T ss_pred ccccCcCCCCcccCCC-C----CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeC
Confidence 3568888998876443 2 478999999999999999999999999999999999997 456788999999999999
Q ss_pred cCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcc-hhccccccCcEEEeecccccccCCcc-cccCCCCCEEE
Q 046544 115 RDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKT-SIGNLSHSLKDFYMSNCNVSGGIPEE-ITNLTNSITID 192 (646)
Q Consensus 115 ~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~-~~~~~~~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~ 192 (646)
++|+++...+ ..|+++++|++|++++|.+++..+.. .+.. .++|++|+|++|.+++..|.. +..+++|++|+
T Consensus 87 s~n~l~~~~~-----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~ 160 (455)
T 3v47_A 87 DYNQFLQLET-----GAFNGLANLEVLTLTQCNLDGAVLSGNFFKP-LTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLD 160 (455)
T ss_dssp TTCTTCEECT-----TTTTTCTTCCEEECTTSCCBTHHHHSSTTTT-CTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEE
T ss_pred CCCccCccCh-----hhccCcccCCEEeCCCCCCCccccCcccccC-cccCCEEECCCCccCccCcccccCCCCcccEEe
Confidence 9999987643 46899999999999999998742222 2333 358999999999999988876 89999999999
Q ss_pred ccCCccccccCccccCC--CCCCeEEeecccccCcCchh--------hcCCCCCcEEEecCCcccccCCccccCC---CC
Q 046544 193 LGGNKLNGSIPITLSKL--QKLQGLGLDDNKLEGSIPDS--------ICRLTELYELELGGNKLFGSIPACFSNL---AS 259 (646)
Q Consensus 193 L~~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~--------~~~l~~L~~L~L~~N~i~~~~~~~~~~l---~~ 259 (646)
+++|++.+..|..+..+ .+|+.|++++|.+.+..+.. +..+++|++|++++|++.+..|..+... ++
T Consensus 161 L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~ 240 (455)
T 3v47_A 161 LTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTK 240 (455)
T ss_dssp CTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCC
T ss_pred CCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccc
Confidence 99999999999988877 78999999999999766554 3367899999999999998888777655 89
Q ss_pred CceeecCCCcccccc-----------ccccc--ccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccC
Q 046544 260 LRILSLSSNELTSIP-----------LTFWN--LKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIG 326 (646)
Q Consensus 260 L~~L~L~~N~l~~lp-----------~~~~~--l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~ 326 (646)
|+.|++++|.+.... ..+.. .++|+.|++++|.+++..|..+..+++|+.|++++|.+++..|..|+
T Consensus 241 L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 320 (455)
T 3v47_A 241 IQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFW 320 (455)
T ss_dssp EEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred eeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhc
Confidence 999999998655321 11222 36899999999999999999999999999999999999999999999
Q ss_pred CCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccCC-CCCCCCccc
Q 046544 327 GLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRG-GSFGNFAAE 405 (646)
Q Consensus 327 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~~~~~~~ 405 (646)
++++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|++|++++|++++.++.. ..++.++.+
T Consensus 321 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 400 (455)
T 3v47_A 321 GLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKI 400 (455)
T ss_dssp TCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEE
Confidence 9999999999999999888999999999999999999999998999999999999999999999866654 568899999
Q ss_pred cccCCccccCCCC
Q 046544 406 SFEGNELLCGSPT 418 (646)
Q Consensus 406 ~~~~N~~~c~~~~ 418 (646)
++++|++.|+||.
T Consensus 401 ~l~~N~l~~~~~~ 413 (455)
T 3v47_A 401 WLHTNPWDCSCPR 413 (455)
T ss_dssp ECCSSCBCCCTTT
T ss_pred EccCCCcccCCCc
Confidence 9999999999984
No 24
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4e-44 Score=394.02 Aligned_cols=380 Identities=20% Similarity=0.195 Sum_probs=313.1
Q ss_pred CccccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccc-cCCccccC
Q 046544 3 PLEISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSG-TIPRFIFN 81 (646)
Q Consensus 3 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~ 81 (646)
|..|+.+++|++|+|++|+|+++.|.+|.++++|++|+|++|+|++.+.. .+++|++|+|++|++++ ..|..|++
T Consensus 38 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~----~l~~L~~L~L~~N~l~~~~~p~~~~~ 113 (520)
T 2z7x_B 38 TSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH----PTVNLKHLDLSFNAFDALPICKEFGN 113 (520)
T ss_dssp HHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC----CCCCCSEEECCSSCCSSCCCCGGGGG
T ss_pred hhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc----ccCCccEEeccCCccccccchhhhcc
Confidence 35799999999999999999999999999999999999999999864433 58999999999999997 47899999
Q ss_pred CCCCcEEEcccCccccccCccccCcCCC--CEEEccCCCC--CCCCCc-ccc--------------------cccCCCCC
Q 046544 82 ASKLSILELSQNSFSGFIPNTFGNLRNL--EWLNLRDNYL--TSSTPE-LSF--------------------LSSLSNCK 136 (646)
Q Consensus 82 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L--~~L~L~~N~l--~~~~~~-~~~--------------------~~~l~~l~ 136 (646)
+++|++|+|++|.|++ ..|..+++| ++|+|++|.+ ....+. +.. ...+.+++
T Consensus 114 l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~ 190 (520)
T 2z7x_B 114 MSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVA 190 (520)
T ss_dssp CTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCS
T ss_pred CCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhccc
Confidence 9999999999999986 468888888 9999999999 433221 110 01233456
Q ss_pred CCCEEECCCCC------------------------------CCCcCCcchhc-cccccCcEEEeecccccccCCccc---
Q 046544 137 SLTFIHLSDNP------------------------------LDGILSKTSIG-NLSHSLKDFYMSNCNVSGGIPEEI--- 182 (646)
Q Consensus 137 ~L~~L~Ls~N~------------------------------l~~~~~~~~~~-~~~~~L~~L~L~~n~l~~~~p~~~--- 182 (646)
+|+.|++++|. +.+........ ...++|++|++++|++++.+|..+
T Consensus 191 ~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~ 270 (520)
T 2z7x_B 191 NLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDY 270 (520)
T ss_dssp EEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCC
T ss_pred ceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhc
Confidence 66666666664 21100000000 001379999999999998899988
Q ss_pred --ccCCCCCEEEccCCccccccCccccCC---CCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCC
Q 046544 183 --TNLTNSITIDLGGNKLNGSIPITLSKL---QKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNL 257 (646)
Q Consensus 183 --~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l 257 (646)
..+++|+.+++++|.+ ..++..+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++..|..++++
T Consensus 271 ~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 347 (520)
T 2z7x_B 271 SGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHL 347 (520)
T ss_dssp CSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCC
T ss_pred ccccCceeEeccccccce-ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccC
Confidence 9999999999999999 3433555554 68999999999987533 12688999999999999999899999999
Q ss_pred CCCceeecCCCccccc---ccccccccccccccCCCCcccCCCCC-ccCccccceEEEcccccccccCccccCCCCCCCE
Q 046544 258 ASLRILSLSSNELTSI---PLTFWNLKDILQLNFSSNFLTGPLPL-EIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEY 333 (646)
Q Consensus 258 ~~L~~L~L~~N~l~~l---p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~ 333 (646)
++|++|++++|+++.+ |..+..+++|+.|++++|.+++.+|. .+..+++|+.|++++|.+++..|..+. ++|+.
T Consensus 348 ~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~ 425 (520)
T 2z7x_B 348 TELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKV 425 (520)
T ss_dssp SSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCE
T ss_pred CCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCE
Confidence 9999999999999964 46788999999999999999985554 588999999999999999988887765 79999
Q ss_pred EEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccC
Q 046544 334 LFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPR 395 (646)
Q Consensus 334 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 395 (646)
|++++|+++ .+|..+..+++|++|+|++|+++...+..+..+++|++|++++|+++|.++.
T Consensus 426 L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 426 LDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp EECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred EECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 999999999 6777777999999999999999954444499999999999999999998774
No 25
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.2e-42 Score=385.76 Aligned_cols=374 Identities=20% Similarity=0.173 Sum_probs=259.0
Q ss_pred CCccccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccC
Q 046544 2 IPLEISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFN 81 (646)
Q Consensus 2 ip~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 81 (646)
||..+. ++|++|+|++|+|+++.|.+|.++++|++|+|++|+|++..+. .+..+++|++|+|++|+|+. +|.. .
T Consensus 46 ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~--~ 119 (562)
T 3a79_B 46 VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFH-VFLFNQDLEYLDVSHNRLQN-ISCC--P 119 (562)
T ss_dssp CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTT-TTTTCTTCCEEECTTSCCCE-ECSC--C
T ss_pred CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHH-HhCCCCCCCEEECCCCcCCc-cCcc--c
Confidence 455443 6677777777777766666777777777777777777654333 22346777777777777773 4433 6
Q ss_pred CCCCcEEEcccCcccccc-CccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCC--CEEECCCCCC--CCcCCcch
Q 046544 82 ASKLSILELSQNSFSGFI-PNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSL--TFIHLSDNPL--DGILSKTS 156 (646)
Q Consensus 82 l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L--~~L~Ls~N~l--~~~~~~~~ 156 (646)
+++|++|+|++|+++++. |..|+++++|++|+|++|+++.. .+.++++| ++|++++|.+ ++..+..
T Consensus 120 l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~--------~~~~l~~L~L~~L~L~~n~l~~~~~~~~~- 190 (562)
T 3a79_B 120 MASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL--------DLLPVAHLHLSCILLDLVSYHIKGGETES- 190 (562)
T ss_dssp CTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT--------TTGGGTTSCEEEEEEEESSCCCCSSSCCE-
T ss_pred cccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC--------chhhhhhceeeEEEeecccccccccCccc-
Confidence 677777777777777643 46677777777777777776642 12333333 7777777766 3332211
Q ss_pred hccc-------------------------cccCcEEEeeccc----------------------------cccc----CC
Q 046544 157 IGNL-------------------------SHSLKDFYMSNCN----------------------------VSGG----IP 179 (646)
Q Consensus 157 ~~~~-------------------------~~~L~~L~L~~n~----------------------------l~~~----~p 179 (646)
+..+ .++|+.+++++|. +++. .+
T Consensus 191 l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~ 270 (562)
T 3a79_B 191 LQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLF 270 (562)
T ss_dssp EEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHH
T ss_pred ccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHH
Confidence 1110 0122222222221 0000 00
Q ss_pred cccccCCCCCEEEccCCccccccCccc-----cCC--------------------------CCCCeEEeecccccCcCch
Q 046544 180 EEITNLTNSITIDLGGNKLNGSIPITL-----SKL--------------------------QKLQGLGLDDNKLEGSIPD 228 (646)
Q Consensus 180 ~~~~~l~~L~~L~L~~N~l~~~~~~~~-----~~l--------------------------~~L~~L~L~~N~l~~~~~~ 228 (646)
.. ...++|++|++++|++.+.+|..+ ..+ .+|++|++++|.+....
T Consensus 271 ~~-~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~-- 347 (562)
T 3a79_B 271 QF-FWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV-- 347 (562)
T ss_dssp HH-HTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC--
T ss_pred Hh-hhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCccccc--
Confidence 00 001245555555555554444443 222 45777888888775322
Q ss_pred hhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccc---cccccccccccccCCCCcccCCC-CCccCcc
Q 046544 229 SICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIP---LTFWNLKDILQLNFSSNFLTGPL-PLEIGNL 304 (646)
Q Consensus 229 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp---~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l 304 (646)
.+..+++|++|++++|++++..|..|.++++|++|++++|+++.+| ..+..+++|+.|++++|.+++.+ +..+..+
T Consensus 348 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l 427 (562)
T 3a79_B 348 CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWA 427 (562)
T ss_dssp CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCC
T ss_pred CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCc
Confidence 1268899999999999999989999999999999999999999765 46889999999999999999844 4568899
Q ss_pred ccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeC
Q 046544 305 KVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNL 384 (646)
Q Consensus 305 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 384 (646)
++|+.|++++|.+++..|..+. ++|++|+|++|+++ .+|..+..+++|++|+|++|++++..+..+..+++|+.|++
T Consensus 428 ~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l 504 (562)
T 3a79_B 428 ESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWL 504 (562)
T ss_dssp TTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEEC
T ss_pred ccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEe
Confidence 9999999999999987776654 79999999999999 56766679999999999999999544444999999999999
Q ss_pred cCCcceeeccCC
Q 046544 385 SFNKLEGEIPRG 396 (646)
Q Consensus 385 ~~N~l~~~~p~~ 396 (646)
++|+++|.+|..
T Consensus 505 ~~N~~~c~c~~~ 516 (562)
T 3a79_B 505 HDNPWDCTCPGI 516 (562)
T ss_dssp CSCCBCCCHHHH
T ss_pred cCCCcCCCcchH
Confidence 999999988754
No 26
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=378.20 Aligned_cols=347 Identities=22% Similarity=0.218 Sum_probs=270.8
Q ss_pred CEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEcccCccccccCccccCcCCCCEEEccC
Q 046544 37 KLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRD 116 (646)
Q Consensus 37 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 116 (646)
+.++.++++++..+..+ .+++++|+|++|+|++..+..|.++++|++|+|++|.|+++.|..|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~~ip~~~----~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 14 RAVLCHRKRFVAVPEGI----PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TEEECCSCCCSSCCSCC----CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCcCCCCC----CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 46677777776544333 34778888888888877788888888888888888888888888888888888888888
Q ss_pred CCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEccCC
Q 046544 117 NYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGN 196 (646)
Q Consensus 117 N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 196 (646)
|+++.+++. .|.++++|++|+|++|++.++ .|..|..+++|+.|++++|
T Consensus 90 n~l~~~~~~-----~~~~l~~L~~L~Ls~n~i~~~--------------------------~~~~~~~l~~L~~L~l~~n 138 (477)
T 2id5_A 90 NRLKLIPLG-----VFTGLSNLTKLDISENKIVIL--------------------------LDYMFQDLYNLKSLEVGDN 138 (477)
T ss_dssp SCCCSCCTT-----SSTTCTTCCEEECTTSCCCEE--------------------------CTTTTTTCTTCCEEEECCT
T ss_pred CcCCccCcc-----cccCCCCCCEEECCCCccccC--------------------------ChhHccccccCCEEECCCC
Confidence 888877543 367778888877777776543 4556677778888888888
Q ss_pred ccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCccc-cccc
Q 046544 197 KLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELT-SIPL 275 (646)
Q Consensus 197 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 275 (646)
++.+..+..|.++++|++|++++|++++..+..|..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+. .+|.
T Consensus 139 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~ 218 (477)
T 2id5_A 139 DLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTP 218 (477)
T ss_dssp TCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECT
T ss_pred ccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCc
Confidence 887777777888888888888888888777777888888888888888888777777888888888888887544 6666
Q ss_pred ccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCC
Q 046544 276 TFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISL 355 (646)
Q Consensus 276 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 355 (646)
......+|+.|++++|.+++..+..+..+++|+.|++++|.++++.+..|.++++|++|+|++|++++..|..|..+++|
T Consensus 219 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 298 (477)
T 2id5_A 219 NCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYL 298 (477)
T ss_dssp TTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTC
T ss_pred ccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccC
Confidence 66666688888888888876555678888888888888888888888888888888888888888888888888888888
Q ss_pred CEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccCCCCCCCCccccccCCccccCCCC
Q 046544 356 KFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFAAESFEGNELLCGSPT 418 (646)
Q Consensus 356 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~~ 418 (646)
+.|+|++|++++..+..|..+++|++|+|++|++.|.++....+.......+.++...|..|.
T Consensus 299 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 299 RVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp CEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred CEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 999999888887777778888888899999998888766543333444556777888886653
No 27
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.6e-41 Score=382.47 Aligned_cols=389 Identities=22% Similarity=0.203 Sum_probs=317.8
Q ss_pred CccccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCC
Q 046544 3 PLEISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNA 82 (646)
Q Consensus 3 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 82 (646)
|.+|+++++|++|||++|+|+++.|.+|.++++|++|+|++|+|++.++. .+..+++|++|+|++|+|++..+..|+++
T Consensus 69 ~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~-~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L 147 (635)
T 4g8a_A 69 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALG-AFSGLSSLQKLVAVETNLASLENFPIGHL 147 (635)
T ss_dssp TTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGG-GGTTCTTCCEEECTTSCCCCSTTCCCTTC
T ss_pred HHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHH-HhcCCCCCCEEECCCCcCCCCChhhhhcC
Confidence 35799999999999999999999999999999999999999999875443 34469999999999999998888899999
Q ss_pred CCCcEEEcccCccccc-cCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCC-CCCEEECCCCCCCCcCCcch----
Q 046544 83 SKLSILELSQNSFSGF-IPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCK-SLTFIHLSDNPLDGILSKTS---- 156 (646)
Q Consensus 83 ~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~~~~~---- 156 (646)
++|++|+|++|.++++ .|..++.+++|++|+|++|+|+.+++.. ...+.+++ .+..++++.|.+..+.+..+
T Consensus 148 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~ 225 (635)
T 4g8a_A 148 KTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD--LRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIR 225 (635)
T ss_dssp TTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG--GHHHHTCTTCCCEEECTTCCCCEECTTTTTTCE
T ss_pred cccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccc--ccchhhhhhhhhhhhcccCcccccCcccccchh
Confidence 9999999999999865 4778899999999999999998765431 01111111 11233333333322110000
Q ss_pred --------------------------------------------------------------------------------
Q 046544 157 -------------------------------------------------------------------------------- 156 (646)
Q Consensus 157 -------------------------------------------------------------------------------- 156 (646)
T Consensus 226 ~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 305 (635)
T 4g8a_A 226 LHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCL 305 (635)
T ss_dssp EEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGG
T ss_pred hhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhh
Confidence
Q ss_pred -----------------hccccccCcEEEeecccccccCCc-------------------ccccCCCCCEEEccCCcccc
Q 046544 157 -----------------IGNLSHSLKDFYMSNCNVSGGIPE-------------------EITNLTNSITIDLGGNKLNG 200 (646)
Q Consensus 157 -----------------~~~~~~~L~~L~L~~n~l~~~~p~-------------------~~~~l~~L~~L~L~~N~l~~ 200 (646)
.......++.|++.+|.+.+..+. ....+++|+.|++++|.+..
T Consensus 306 ~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~ 385 (635)
T 4g8a_A 306 TNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSF 385 (635)
T ss_dssp TTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBE
T ss_pred cccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhcccccc
Confidence 000112466777777766544332 23457899999999999864
Q ss_pred --ccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCC-ccccCCCCCceeecCCCccccc-ccc
Q 046544 201 --SIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIP-ACFSNLASLRILSLSSNELTSI-PLT 276 (646)
Q Consensus 201 --~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~l-p~~ 276 (646)
..+..+..+.+|+.|+++.|.+. ..+..+..+++|+.+++++|......+ ..|.++++++.++++.|.++.+ |..
T Consensus 386 ~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~ 464 (635)
T 4g8a_A 386 KGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGI 464 (635)
T ss_dssp EEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTT
T ss_pred ccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhccccccccccccccccccccccccccccccccccc
Confidence 45667788899999999999988 456678899999999999998765544 5789999999999999999966 456
Q ss_pred cccccccccccCCCCcc-cCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCC
Q 046544 277 FWNLKDILQLNFSSNFL-TGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISL 355 (646)
Q Consensus 277 ~~~l~~L~~L~l~~N~l-~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 355 (646)
+..++.++.|++++|.+ .+..|..|..+++|+.|+|++|+++++.|..|+++++|++|+|++|+|++..|..|.++++|
T Consensus 465 ~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L 544 (635)
T 4g8a_A 465 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSL 544 (635)
T ss_dssp TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTC
T ss_pred cccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCC
Confidence 77899999999999975 45678899999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEccCCcCcccCCccccCC-CCCCceeCcCCcceeeccC
Q 046544 356 KFLNLSNNNLSGAIPTSLEKL-SYLEDLNLSFNKLEGEIPR 395 (646)
Q Consensus 356 ~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~ 395 (646)
++|||++|+|++..|..|..+ ++|++|+|++|+++|.+..
T Consensus 545 ~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 545 QVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp CEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred CEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 999999999999999999998 6899999999999998874
No 28
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=6.1e-41 Score=363.12 Aligned_cols=347 Identities=26% Similarity=0.397 Sum_probs=271.1
Q ss_pred CCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCCCcE
Q 046544 8 NLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKLSI 87 (646)
Q Consensus 8 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 87 (646)
.++++++|++++|.++.+ | .+..+++|++|+|++|.+++.++ +..+++|++|++++|.+++..+ +..+++|++
T Consensus 44 ~l~~l~~L~l~~~~i~~l-~-~~~~l~~L~~L~Ls~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKSI-D-GVEYLNNLTQINFSNNQLTDITP---LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHTCCEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred HhccccEEecCCCCCccC-c-chhhhcCCCEEECCCCccCCchh---hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 367889999999988753 4 37888999999999999877544 3458899999999999986655 888899999
Q ss_pred EEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEE
Q 046544 88 LELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDF 167 (646)
Q Consensus 88 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L 167 (646)
|++++|.++++.+ +.++++|++|++++|.++.++ .+.++++|++|+++ |.+.++.+ +..+ ++|++|
T Consensus 117 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~-------~~~~l~~L~~L~l~-~~~~~~~~---~~~l-~~L~~L 182 (466)
T 1o6v_A 117 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISDIS-------ALSGLTSLQQLSFG-NQVTDLKP---LANL-TTLERL 182 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCG-------GGTTCTTCSEEEEE-ESCCCCGG---GTTC-TTCCEE
T ss_pred EECCCCCCCCChH--HcCCCCCCEEECCCCccCCCh-------hhccCCcccEeecC-CcccCchh---hccC-CCCCEE
Confidence 9999999887644 888999999999999888753 37788889999886 55554432 3332 578888
Q ss_pred EeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCccc
Q 046544 168 YMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLF 247 (646)
Q Consensus 168 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~ 247 (646)
++++|.+.+. ..+..+++|++|++++|++.+..| +..+++|++|++++|++++. ..+..+++|++|++++|++.
T Consensus 183 ~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~ 256 (466)
T 1o6v_A 183 DISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQIS 256 (466)
T ss_dssp ECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred ECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccc
Confidence 8888888754 457788888888888888876655 66788888888888888753 45778888888888888887
Q ss_pred ccCCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCC
Q 046544 248 GSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGG 327 (646)
Q Consensus 248 ~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 327 (646)
+..+ +..+++|+.|++++|.++.+|. +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..| ++.
T Consensus 257 ~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~ 329 (466)
T 1o6v_A 257 NLAP--LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSS 329 (466)
T ss_dssp CCGG--GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGG
T ss_pred cchh--hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hcc
Confidence 6554 7788888888888888887775 7778888888888888876544 7778888888888888887655 677
Q ss_pred CCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceee
Q 046544 328 LKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGE 392 (646)
Q Consensus 328 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 392 (646)
+++|++|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++++.
T Consensus 330 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 330 LTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred CccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 88888888888888764 467788888888888888887666 77888888888888888863
No 29
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=5.4e-41 Score=360.68 Aligned_cols=356 Identities=25% Similarity=0.301 Sum_probs=267.3
Q ss_pred CCCccccCCCCCCEEECCCCcccccCCcCccCCCCC-------------CEEECcCCcCcccCCccCcCCCCCCCEEEcc
Q 046544 1 EIPLEISNLQNLEELDLRHNKLVGTVPAAIFNMSML-------------KLLHLQNNSLLGCLSSIADVRLPNLEALLLW 67 (646)
Q Consensus 1 ~ip~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-------------~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~ 67 (646)
+||++|+++++|++|++++|++++..|..++++++| ++|++++|.+++.+. . .++|++|+++
T Consensus 25 ~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~-~----~~~L~~L~l~ 99 (454)
T 1jl5_A 25 EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPE-L----PPHLESLVAS 99 (454)
T ss_dssp ---------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCS-C----CTTCSEEECC
T ss_pred hCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCC-C----cCCCCEEEcc
Confidence 479999999999999999999999999999988865 999999999987433 2 4689999999
Q ss_pred CCcccccCCccccCCCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCC
Q 046544 68 GNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNP 147 (646)
Q Consensus 68 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~ 147 (646)
+|++++ +|.. +++|++|++++|+++++.. . .++|++|++++|+++.++ .|+++++|++|++++|+
T Consensus 100 ~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~-~---~~~L~~L~L~~n~l~~lp-------~~~~l~~L~~L~l~~N~ 164 (454)
T 1jl5_A 100 CNSLTE-LPEL---PQSLKSLLVDNNNLKALSD-L---PPLLEYLGVSNNQLEKLP-------ELQNSSFLKIIDVDNNS 164 (454)
T ss_dssp SSCCSS-CCCC---CTTCCEEECCSSCCSCCCS-C---CTTCCEEECCSSCCSSCC-------CCTTCTTCCEEECCSSC
T ss_pred CCcCCc-cccc---cCCCcEEECCCCccCcccC-C---CCCCCEEECcCCCCCCCc-------ccCCCCCCCEEECCCCc
Confidence 999997 5653 4789999999999996432 1 278999999999998754 37899999999999999
Q ss_pred CCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCc
Q 046544 148 LDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIP 227 (646)
Q Consensus 148 l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 227 (646)
+++++.. ..+|++|++++|++++ +| .+..+++|+.|++++|++++. |... ++|++|++++|.++ .+|
T Consensus 165 l~~lp~~------~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l-~~~~---~~L~~L~l~~n~l~-~lp 231 (454)
T 1jl5_A 165 LKKLPDL------PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKL-PDLP---LSLESIVAGNNILE-ELP 231 (454)
T ss_dssp CSCCCCC------CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSC-CCCC---TTCCEEECCSSCCS-SCC
T ss_pred CcccCCC------cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcC-CCCc---CcccEEECcCCcCC-ccc
Confidence 9986532 2489999999999997 45 689999999999999999864 3322 58999999999999 566
Q ss_pred hhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccc
Q 046544 228 DSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVL 307 (646)
Q Consensus 228 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 307 (646)
.|..+++|++|++++|++++ +|.. +++|+.|++++|.++.+|.. .++|+.|++++|.+++. |.. .++|
T Consensus 232 -~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L 299 (454)
T 1jl5_A 232 -ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTDLPEL---PQSLTFLDVSENIFSGL-SEL---PPNL 299 (454)
T ss_dssp -CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSEE-SCC---CTTC
T ss_pred -ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccccCcc---cCcCCEEECcCCccCcc-cCc---CCcC
Confidence 48999999999999999986 3433 47899999999999998864 37899999999999862 211 2578
Q ss_pred eEEEcccccccccCccccCCC-CCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcC
Q 046544 308 IGIDFSMNNFSSVIPTEIGGL-KNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSF 386 (646)
Q Consensus 308 ~~L~ls~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 386 (646)
+.|++++|.++++. .+ ++|++|++++|++++ +|.. +++|++|++++|+++ .+|. .+++|++|++++
T Consensus 300 ~~L~l~~N~l~~i~-----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~ 366 (454)
T 1jl5_A 300 YYLNASSNEIRSLC-----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEY 366 (454)
T ss_dssp CEEECCSSCCSEEC-----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCS
T ss_pred CEEECcCCcCCccc-----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCC
Confidence 88899998888632 23 588899999998885 4543 578889999999888 4565 468888999999
Q ss_pred Cccee--eccCC-CCC-------------CCCccccccCCcccc
Q 046544 387 NKLEG--EIPRG-GSF-------------GNFAAESFEGNELLC 414 (646)
Q Consensus 387 N~l~~--~~p~~-~~~-------------~~~~~~~~~~N~~~c 414 (646)
|++++ .+|.. ..+ .+++.+++++|++.+
T Consensus 367 N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 367 NPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLRE 410 (454)
T ss_dssp SCCSSCCCCCTTCCEEECCC------------------------
T ss_pred CCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCc
Confidence 99888 55544 223 567888888888765
No 30
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=358.80 Aligned_cols=349 Identities=23% Similarity=0.183 Sum_probs=275.6
Q ss_pred CCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEcc
Q 046544 12 LEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKLSILELS 91 (646)
Q Consensus 12 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 91 (646)
-+.++.++++++. +|..+. +++++|+|++|+|++..+. .+..+++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 13 ~~~v~c~~~~l~~-ip~~~~--~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 88 (477)
T 2id5_A 13 DRAVLCHRKRFVA-VPEGIP--TETRLLDLGKNRIKTLNQD-EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLR 88 (477)
T ss_dssp TTEEECCSCCCSS-CCSCCC--TTCSEEECCSSCCCEECTT-TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcCc-CCCCCC--CCCcEEECCCCccceECHh-HccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECC
Confidence 4688999999984 555543 5899999999999875443 33458999999999999999889999999999999999
Q ss_pred cCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEeec
Q 046544 92 QNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSN 171 (646)
Q Consensus 92 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~ 171 (646)
+|+++++.+..|.++++|++|+|++|+++..++ ..|.++++|++|++++|.+.++
T Consensus 89 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~-----~~~~~l~~L~~L~l~~n~l~~~-------------------- 143 (477)
T 2id5_A 89 SNRLKLIPLGVFTGLSNLTKLDISENKIVILLD-----YMFQDLYNLKSLEVGDNDLVYI-------------------- 143 (477)
T ss_dssp SSCCCSCCTTSSTTCTTCCEEECTTSCCCEECT-----TTTTTCTTCCEEEECCTTCCEE--------------------
T ss_pred CCcCCccCcccccCCCCCCEEECCCCccccCCh-----hHccccccCCEEECCCCcccee--------------------
Confidence 999998888889999999999999999987644 3578888888888888877654
Q ss_pred ccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCC
Q 046544 172 CNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIP 251 (646)
Q Consensus 172 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 251 (646)
.|..|..+++|+.|++++|++++..+..|.++++|+.|++++|.+.+..+..|..+++|+.|++++|.+.+..|
T Consensus 144 ------~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~ 217 (477)
T 2id5_A 144 ------SHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMT 217 (477)
T ss_dssp ------CTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEEC
T ss_pred ------ChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccC
Confidence 34556667777777777777776666667777777777777777776666677777777777777777665555
Q ss_pred ccccCCCCCceeecCCCccccccc-ccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCC
Q 046544 252 ACFSNLASLRILSLSSNELTSIPL-TFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKN 330 (646)
Q Consensus 252 ~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~ 330 (646)
.......+|+.|++++|.++.+|. .+..+++|+.|++++|.+++..+..|..+++|+.|++++|.++++.|..|.++++
T Consensus 218 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 297 (477)
T 2id5_A 218 PNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 297 (477)
T ss_dssp TTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTT
T ss_pred cccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCccc
Confidence 555555577778888887777774 5667778888888888887777778888999999999999999998999999999
Q ss_pred CCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccCC
Q 046544 331 LEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRG 396 (646)
Q Consensus 331 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 396 (646)
|++|+|++|++++..+..|..+++|+.|+|++|.++..-+ ...-......+.+.++...|..|..
T Consensus 298 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~-~~~~~~~~~~~~~~~~~~~C~~p~~ 362 (477)
T 2id5_A 298 LRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCR-LLWVFRRRWRLNFNRQQPTCATPEF 362 (477)
T ss_dssp CCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGG-GHHHHTTTTSSCCTTCCCBEEESGG
T ss_pred CCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccc-hHhHHhhhhccccCccCceeCCchH
Confidence 9999999999998888889999999999999999984322 1111233455677788888877754
No 31
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.5e-39 Score=352.11 Aligned_cols=333 Identities=28% Similarity=0.430 Sum_probs=292.5
Q ss_pred CCccccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccC
Q 046544 2 IPLEISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFN 81 (646)
Q Consensus 2 ip~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 81 (646)
+| .+..+++|++|+|++|++++..+ +.++++|++|+|++|.+++..+ +..+++|++|+|++|.+++..+ +..
T Consensus 61 l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~L~~n~l~~~~~--~~~ 132 (466)
T 1o6v_A 61 ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP---LANLTNLTGLTLFNNQITDIDP--LKN 132 (466)
T ss_dssp CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCCCGG--GTT
T ss_pred Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh---hcCCCCCCEEECCCCCCCCChH--HcC
Confidence 44 37889999999999999997665 9999999999999999987554 3459999999999999996644 899
Q ss_pred CCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhcccc
Q 046544 82 ASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLS 161 (646)
Q Consensus 82 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 161 (646)
+++|++|++++|.+.++. .+.++++|++|+++ |.+... ..+.++++|++|++++|.+.++.. +.. .
T Consensus 133 l~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~l~-~~~~~~-------~~~~~l~~L~~L~l~~n~l~~~~~---l~~-l 198 (466)
T 1o6v_A 133 LTNLNRLELSSNTISDIS--ALSGLTSLQQLSFG-NQVTDL-------KPLANLTTLERLDISSNKVSDISV---LAK-L 198 (466)
T ss_dssp CTTCSEEEEEEEEECCCG--GGTTCTTCSEEEEE-ESCCCC-------GGGTTCTTCCEEECCSSCCCCCGG---GGG-C
T ss_pred CCCCCEEECCCCccCCCh--hhccCCcccEeecC-CcccCc-------hhhccCCCCCEEECcCCcCCCChh---hcc-C
Confidence 999999999999999753 59999999999997 555543 238899999999999999988732 333 3
Q ss_pred ccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEe
Q 046544 162 HSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELEL 241 (646)
Q Consensus 162 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 241 (646)
++|+.|++++|.+.+..| +..+++|+.|++++|++.+. ..+..+++|++|++++|.+.+..+ +..+++|++|++
T Consensus 199 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l 272 (466)
T 1o6v_A 199 TNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 272 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEEC
T ss_pred CCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEEC
Confidence 589999999999998655 78899999999999999865 468899999999999999997655 899999999999
Q ss_pred cCCcccccCCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccC
Q 046544 242 GGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVI 321 (646)
Q Consensus 242 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~ 321 (646)
++|++++..+ +..+++|+.|++++|.++.++. +..+++|+.|++++|.+++..| +..+++|+.|++++|.+++.
T Consensus 273 ~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~- 346 (466)
T 1o6v_A 273 GANQISNISP--LAGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV- 346 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-
T ss_pred CCCccCcccc--ccCCCccCeEEcCCCcccCchh-hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc-
Confidence 9999987655 8899999999999999999876 7889999999999999998766 78999999999999999976
Q ss_pred ccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCcc
Q 046544 322 PTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTS 372 (646)
Q Consensus 322 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 372 (646)
..+..+++|+.|++++|++++..| +..+++|+.|++++|++++ .|..
T Consensus 347 -~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~-~p~~ 393 (466)
T 1o6v_A 347 -SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN-APVN 393 (466)
T ss_dssp -GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC-CCBC
T ss_pred -hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC-Cchh
Confidence 578999999999999999998877 8999999999999999995 4433
No 32
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.7e-39 Score=349.37 Aligned_cols=342 Identities=18% Similarity=0.153 Sum_probs=250.8
Q ss_pred CccccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCC
Q 046544 3 PLEISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNA 82 (646)
Q Consensus 3 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 82 (646)
|.+++++++|++|++++|+++++ | .|..+++|++|+|++|++++. + ...+++|++|+|++|++++. + +..+
T Consensus 35 ~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~---~~~l~~L~~L~Ls~N~l~~~-~--~~~l 105 (457)
T 3bz5_A 35 TISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D---LSQNTNLTYLACDSNKLTNL-D--VTPL 105 (457)
T ss_dssp EEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C---CTTCTTCSEEECCSSCCSCC-C--CTTC
T ss_pred ccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c---cccCCCCCEEECcCCCCcee-e--cCCC
Confidence 45678899999999999999975 4 799999999999999999874 2 34589999999999999975 3 8899
Q ss_pred CCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccc
Q 046544 83 SKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSH 162 (646)
Q Consensus 83 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 162 (646)
++|++|++++|+++++ | ++.+++|++|++++|+++.++ ++++++|++|++++|+..+..+ +.. .+
T Consensus 106 ~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l~--------l~~l~~L~~L~l~~n~~~~~~~---~~~-l~ 170 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEID--------VSHNTQLTELDCHLNKKITKLD---VTP-QT 170 (457)
T ss_dssp TTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCCC--------CTTCTTCCEEECTTCSCCCCCC---CTT-CT
T ss_pred CcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCccceec--------cccCCcCCEEECCCCCcccccc---ccc-CC
Confidence 9999999999999975 3 899999999999999999852 6789999999999995433222 222 35
Q ss_pred cCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEec
Q 046544 163 SLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELG 242 (646)
Q Consensus 163 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 242 (646)
+|++|++++|++++. | +..+++|+.|++++|++++. .+..+++|++|++++|++++ +| +..+++|++|+++
T Consensus 171 ~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~ 241 (457)
T 3bz5_A 171 QLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCS 241 (457)
T ss_dssp TCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECC
T ss_pred cCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEee
Confidence 899999999999984 4 88899999999999999976 48889999999999999997 55 8899999999999
Q ss_pred CCcccccCCccccCCCCCceeecCCCccccccc---------ccccccccccccCCCCcccCCCCCc--------cCccc
Q 046544 243 GNKLFGSIPACFSNLASLRILSLSSNELTSIPL---------TFWNLKDILQLNFSSNFLTGPLPLE--------IGNLK 305 (646)
Q Consensus 243 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~---------~~~~l~~L~~L~l~~N~l~~~~~~~--------~~~l~ 305 (646)
+|++++..+.. +++|+.|++++|.++.+.. .+..+++|+.|++++|...+.+|.. +.+++
T Consensus 242 ~N~l~~~~~~~---l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~ 318 (457)
T 3bz5_A 242 VNPLTELDVST---LSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNP 318 (457)
T ss_dssp SSCCSCCCCTT---CTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCT
T ss_pred CCcCCCcCHHH---CCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCcccceeccCCCcceEechhhcc
Confidence 99999876544 4555555555544332211 1345677777777777765544432 33344
Q ss_pred cceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCc
Q 046544 306 VLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLS 385 (646)
Q Consensus 306 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 385 (646)
+|+.|++++|++++. .++.+++|+.|++++|++++ ++.|..|++++|.++|. ..+..|+.++++
T Consensus 319 ~L~~L~L~~N~l~~l---~l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~ 382 (457)
T 3bz5_A 319 KLVYLYLNNTELTEL---DVSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLT 382 (457)
T ss_dssp TCCEEECTTCCCSCC---CCTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCB
T ss_pred cCCEEECCCCccccc---ccccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccc
Confidence 555555555555543 14555555555555555543 12334444555555543 123445566666
Q ss_pred CCcceeeccCC
Q 046544 386 FNKLEGEIPRG 396 (646)
Q Consensus 386 ~N~l~~~~p~~ 396 (646)
+|+++|.+|..
T Consensus 383 ~N~l~g~ip~~ 393 (457)
T 3bz5_A 383 NNSLTIAVSPD 393 (457)
T ss_dssp TTBEEEECCTT
T ss_pred cCcEEEEcChh
Confidence 66666666643
No 33
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-38 Score=336.40 Aligned_cols=336 Identities=20% Similarity=0.187 Sum_probs=230.9
Q ss_pred CCCCCEEEccCCcccccCCccccCCCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCC
Q 046544 58 LPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKS 137 (646)
Q Consensus 58 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~ 137 (646)
++++++|++++|.++...+..|..+++|++|+|++|.++++.+..|.++++|++|+|++|.++.+++. .|+++++
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~ 118 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH-----VFQNVPL 118 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTCTT
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHH-----HhcCCCC
Confidence 45555555555555544444455555555555555555555555555555555555555555554332 3455555
Q ss_pred CCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEe
Q 046544 138 LTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGL 217 (646)
Q Consensus 138 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 217 (646)
|++|++++|+++.+++.. +.. .++|++|++++|.+++..|..+..+++|++|++++|++++. .+..+++|+.|++
T Consensus 119 L~~L~L~~n~l~~l~~~~-~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l 193 (390)
T 3o6n_A 119 LTVLVLERNDLSSLPRGI-FHN-TPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANV 193 (390)
T ss_dssp CCEEECCSSCCCCCCTTT-TTT-CTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEEC
T ss_pred CCEEECCCCccCcCCHHH-hcC-CCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeec
Confidence 555555555555443221 111 23455555555555555667777888888888888888754 2556678888888
Q ss_pred ecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCC
Q 046544 218 DDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPL 297 (646)
Q Consensus 218 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~ 297 (646)
++|.+++. ...++|++|++++|.+...... ..++|+.|++++|.++..+ .+..+++|+.|++++|.+++..
T Consensus 194 ~~n~l~~~-----~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~Ls~n~l~~~~ 264 (390)
T 3o6n_A 194 SYNLLSTL-----AIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDTA-WLLNYPGLVEVDLSYNELEKIM 264 (390)
T ss_dssp CSSCCSEE-----ECCSSCSEEECCSSCCCEEECC---CCSSCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCEEE
T ss_pred cccccccc-----CCCCcceEEECCCCeeeecccc---ccccccEEECCCCCCcccH-HHcCCCCccEEECCCCcCCCcC
Confidence 88887742 2345788888888888755332 2468888888888888764 6777888888888888888877
Q ss_pred CCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCC
Q 046544 298 PLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLS 377 (646)
Q Consensus 298 ~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 377 (646)
|..|..+++|+.|++++|++++. |..+..+++|++|++++|+++ .+|..+..+++|+.|+|++|+++.. | +..++
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~ 339 (390)
T 3o6n_A 265 YHPFVKMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHH 339 (390)
T ss_dssp SGGGTTCSSCCEEECCSSCCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTC
T ss_pred hhHccccccCCEEECCCCcCccc-CcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhc
Confidence 88888888999999999988864 566678889999999999988 5666788888999999999998854 3 67788
Q ss_pred CCCceeCcCCcceeeccCCCCCCCCccccccCCccccCCCC
Q 046544 378 YLEDLNLSFNKLEGEIPRGGSFGNFAAESFEGNELLCGSPT 418 (646)
Q Consensus 378 ~L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~~ 418 (646)
+|+.|++++|++++..... .+..+....+.+++..|.++.
T Consensus 340 ~L~~L~l~~N~~~~~~~~~-~~~~~~~~~~~~~~~~c~~~~ 379 (390)
T 3o6n_A 340 TLKNLTLSHNDWDCNSLRA-LFRNVARPAVDDADQHCKIDY 379 (390)
T ss_dssp CCSEEECCSSCEEHHHHHH-HTTTCCTTTBCCCCSCCCTTC
T ss_pred cCCEEEcCCCCccchhHHH-HHHHHHhhcccccCceecccc
Confidence 8999999999998754332 244555566777887887654
No 34
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2e-38 Score=335.45 Aligned_cols=314 Identities=18% Similarity=0.219 Sum_probs=278.5
Q ss_pred CCCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccc
Q 046544 81 NASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNL 160 (646)
Q Consensus 81 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 160 (646)
.+++++.|++++|.+..+++..|..+++|++|+|++|.++.+++ ..|.++++|++|++++|.++++++.. +..
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~-----~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~- 115 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDT-----YAFAYAHTIQKLYMGFNAIRYLPPHV-FQN- 115 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECT-----TTTTTCTTCCEEECCSSCCCCCCTTT-TTT-
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccCh-----hhccCCCCcCEEECCCCCCCcCCHHH-hcC-
Confidence 46889999999999998888889999999999999999988754 35899999999999999999886543 333
Q ss_pred cccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEE
Q 046544 161 SHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELE 240 (646)
Q Consensus 161 ~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 240 (646)
.++|++|++++|.++...+..|..+++|++|++++|++.+..|..|.++++|++|++++|++++. .+..+++|+.|+
T Consensus 116 l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~ 192 (390)
T 3o6n_A 116 VPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHAN 192 (390)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEE
T ss_pred CCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceee
Confidence 35899999999999987777789999999999999999999999999999999999999999965 366789999999
Q ss_pred ecCCcccccCCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEccccccccc
Q 046544 241 LGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSV 320 (646)
Q Consensus 241 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~ 320 (646)
+++|.+.+. ...++|+.|++++|.++.+|... .++|+.|++++|.+++. ..+..+++|+.|++++|.+++.
T Consensus 193 l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~~~~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~ 263 (390)
T 3o6n_A 193 VSYNLLSTL-----AIPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKI 263 (390)
T ss_dssp CCSSCCSEE-----ECCSSCSEEECCSSCCCEEECCC--CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEE
T ss_pred ccccccccc-----CCCCcceEEECCCCeeeeccccc--cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCc
Confidence 999998753 34468999999999999987654 47899999999999864 5789999999999999999999
Q ss_pred CccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccCCCCCC
Q 046544 321 IPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRGGSFG 400 (646)
Q Consensus 321 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 400 (646)
.|..|..+++|++|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|++|++++|+++.. | ...+.
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~-~~~~~ 339 (390)
T 3o6n_A 264 MYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K-LSTHH 339 (390)
T ss_dssp ESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C-CCTTC
T ss_pred ChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C-chhhc
Confidence 99999999999999999999984 6777889999999999999998 6777889999999999999999875 3 45578
Q ss_pred CCccccccCCccccCCC
Q 046544 401 NFAAESFEGNELLCGSP 417 (646)
Q Consensus 401 ~~~~~~~~~N~~~c~~~ 417 (646)
.++.+++++|+|.|++.
T Consensus 340 ~L~~L~l~~N~~~~~~~ 356 (390)
T 3o6n_A 340 TLKNLTLSHNDWDCNSL 356 (390)
T ss_dssp CCSEEECCSSCEEHHHH
T ss_pred cCCEEEcCCCCccchhH
Confidence 99999999999999653
No 35
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=3.8e-38 Score=338.51 Aligned_cols=348 Identities=27% Similarity=0.278 Sum_probs=266.7
Q ss_pred CCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCc-cCcCCCCC-------------CCEEEccCCcccc
Q 046544 8 NLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSS-IADVRLPN-------------LEALLLWGNNFSG 73 (646)
Q Consensus 8 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~l~~-------------L~~L~L~~N~l~~ 73 (646)
+.+.|++|++++|++ +.+|.+|+++++|++|++++|.+++.++. +.. +.+ +++|++++|.+++
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~--l~~L~~l~l~~c~~~~l~~L~l~~~~l~~ 85 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGE--QREMAVSRLRDCLDRQAHELELNNLGLSS 85 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCC--CHHHHHHHHHHHHHHTCSEEECTTSCCSC
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCccccc--chhcchhhhhhhhccCCCEEEecCCcccc
Confidence 468999999999999 68899999999999999999999876655 433 544 5999999999996
Q ss_pred cCCccccCCCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCC
Q 046544 74 TIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILS 153 (646)
Q Consensus 74 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~ 153 (646)
+|.. .++|++|++++|.++++ |.. +++|++|++++|+++.++.. .++|++|++++|++++++
T Consensus 86 -lp~~---~~~L~~L~l~~n~l~~l-p~~---~~~L~~L~l~~n~l~~l~~~---------~~~L~~L~L~~n~l~~lp- 147 (454)
T 1jl5_A 86 -LPEL---PPHLESLVASCNSLTEL-PEL---PQSLKSLLVDNNNLKALSDL---------PPLLEYLGVSNNQLEKLP- 147 (454)
T ss_dssp -CCSC---CTTCSEEECCSSCCSSC-CCC---CTTCCEEECCSSCCSCCCSC---------CTTCCEEECCSSCCSSCC-
T ss_pred -CCCC---cCCCCEEEccCCcCCcc-ccc---cCCCcEEECCCCccCcccCC---------CCCCCEEECcCCCCCCCc-
Confidence 4442 47899999999999984 543 48999999999999886431 268999999999999875
Q ss_pred cchhccccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCC
Q 046544 154 KTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRL 233 (646)
Q Consensus 154 ~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 233 (646)
.++.+ ++|++|++++|++++ +|..+ ++|++|++++|++++. | .+.++++|++|++++|++++ +|.. .
T Consensus 148 --~~~~l-~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l-~-~~~~l~~L~~L~l~~N~l~~-l~~~---~ 214 (454)
T 1jl5_A 148 --ELQNS-SFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEEL-P-ELQNLPFLTAIYADNNSLKK-LPDL---P 214 (454)
T ss_dssp --CCTTC-TTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSS-CCCC---C
T ss_pred --ccCCC-CCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcC-c-cccCCCCCCEEECCCCcCCc-CCCC---c
Confidence 24443 589999999999997 45543 5899999999999974 5 69999999999999999996 4443 2
Q ss_pred CCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcc
Q 046544 234 TELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFS 313 (646)
Q Consensus 234 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls 313 (646)
++|++|++++|++. .+| .|+.+++|++|++++|+++.+|.. +++|+.|++++|.+++ +|.. .++|+.|+++
T Consensus 215 ~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls 285 (454)
T 1jl5_A 215 LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTLPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVS 285 (454)
T ss_dssp TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECC
T ss_pred CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCccccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECc
Confidence 58999999999998 556 489999999999999999999864 3789999999999996 4543 3789999999
Q ss_pred cccccccCccccCCCCCCCEEEccCccCCCcccccccCC-CCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceee
Q 046544 314 MNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDL-ISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGE 392 (646)
Q Consensus 314 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 392 (646)
+|.++++. .. .++|++|++++|++++ ++ .+ ++|+.|++++|++++ +|.. +++|++|++++|++++
T Consensus 286 ~N~l~~l~-~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~- 351 (454)
T 1jl5_A 286 ENIFSGLS-EL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE- 351 (454)
T ss_dssp SSCCSEES-CC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-
T ss_pred CCccCccc-Cc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-
Confidence 99999742 11 2689999999999985 33 23 589999999999996 6654 5899999999999996
Q ss_pred ccCCCCCCCCccccccCCcccc
Q 046544 393 IPRGGSFGNFAAESFEGNELLC 414 (646)
Q Consensus 393 ~p~~~~~~~~~~~~~~~N~~~c 414 (646)
+|. .+..++.+++++|++.+
T Consensus 352 lp~--~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 352 VPE--LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp CCC--CCTTCCEEECCSSCCSS
T ss_pred ccc--hhhhccEEECCCCCCCc
Confidence 565 47899999999999877
No 36
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.5e-38 Score=350.20 Aligned_cols=337 Identities=20% Similarity=0.180 Sum_probs=259.2
Q ss_pred CCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEcccCccccccCccccCcCCCCE
Q 046544 32 NMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEW 111 (646)
Q Consensus 32 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 111 (646)
.+++++.|++++|.+...++.. +..+++|++|+|++|.|++..|..|..+++|++|+|++|.|+++.|..|+++++|++
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 127 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAAL-LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 127 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHH-HHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cCCCceEEEeeCCCCCCcCHHH-HccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCE
Confidence 3567788888888776644432 224677888888888887777777788888888888888888777777788888888
Q ss_pred EEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEE
Q 046544 112 LNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITI 191 (646)
Q Consensus 112 L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 191 (646)
|+|++|.|+.+++. .|+++++|++|+|++|.+.+ ..|..|..+++|++|
T Consensus 128 L~L~~n~l~~l~~~-----~~~~l~~L~~L~Ls~N~l~~--------------------------~~~~~~~~l~~L~~L 176 (597)
T 3oja_B 128 LVLERNDLSSLPRG-----IFHNTPKLTTLSMSNNNLER--------------------------IEDDTFQATTSLQNL 176 (597)
T ss_dssp EECCSSCCCCCCTT-----TTTTCTTCCEEECCSSCCCB--------------------------CCTTTTTTCTTCCEE
T ss_pred EEeeCCCCCCCCHH-----HhccCCCCCEEEeeCCcCCC--------------------------CChhhhhcCCcCcEE
Confidence 88888888776543 25667777777777666654 345667777888888
Q ss_pred EccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCccc
Q 046544 192 DLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELT 271 (646)
Q Consensus 192 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 271 (646)
++++|.+++.. +..+++|+.|++++|.+++. ...++|+.|++++|.+....+..+ ++|+.|+|++|.++
T Consensus 177 ~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~~---~~L~~L~L~~n~l~ 245 (597)
T 3oja_B 177 QLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGPVN---VELTILKLQHNNLT 245 (597)
T ss_dssp ECTTSCCSBCC---GGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCCEEECSCC---SCCCEEECCSSCCC
T ss_pred ECcCCCCCCcC---hhhhhhhhhhhcccCccccc-----cCCchhheeeccCCcccccccccC---CCCCEEECCCCCCC
Confidence 88888877653 45567788888888877742 334578888888888875544332 57888888888888
Q ss_pred ccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccC
Q 046544 272 SIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGD 351 (646)
Q Consensus 272 ~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 351 (646)
.. ..+..+++|+.|++++|.+++..|..|+.+++|+.|+|++|.++++ |..+..+++|+.|+|++|+++ .+|..+..
T Consensus 246 ~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~ 322 (597)
T 3oja_B 246 DT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQ 322 (597)
T ss_dssp CC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHH
T ss_pred CC-hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCC-CcccccCCCCcEEECCCCCCC-ccCccccc
Confidence 75 4677888899999999999888888999999999999999999974 667788999999999999999 57778899
Q ss_pred CCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccCCCCCCCCccccccCCccccCCCC
Q 046544 352 LISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFAAESFEGNELLCGSPT 418 (646)
Q Consensus 352 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~~ 418 (646)
+++|+.|+|++|.+++. | +..+++|+.|++++|+++|.++.. .+..+....+.+++..|+.+.
T Consensus 323 l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~~-~~~~~~~~~~~~~~~~C~~~~ 385 (597)
T 3oja_B 323 FDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLRA-LFRNVARPAVDDADQHCKIDY 385 (597)
T ss_dssp HTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHHH-HTTTCCTTTBCCCCCCCCTTC
T ss_pred CCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHHH-HHHHHhhhccccccccCCcch
Confidence 99999999999999854 3 677889999999999999865433 245555566788888897643
No 37
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.7e-37 Score=333.72 Aligned_cols=344 Identities=22% Similarity=0.260 Sum_probs=275.7
Q ss_pred cccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEcccCccccccC
Q 046544 21 KLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIP 100 (646)
Q Consensus 21 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 100 (646)
......+..+.++++|++|+|++|.+++. +.+ ..+++|++|+|++|++++. | +..+++|++|++++|+|+++ |
T Consensus 29 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~l--~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~ 101 (457)
T 3bz5_A 29 EMQATDTISEEQLATLTSLDCHNSSITDM-TGI--EKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D 101 (457)
T ss_dssp TCCTTSEEEHHHHTTCCEEECCSSCCCCC-TTG--GGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C
T ss_pred CcCcccccChhHcCCCCEEEccCCCcccC-hhh--cccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e
Confidence 34445566788999999999999999875 443 3589999999999999975 4 88999999999999999986 3
Q ss_pred ccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCc
Q 046544 101 NTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPE 180 (646)
Q Consensus 101 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~ 180 (646)
|+++++|++|+|++|+++.++ ++++++|++|++++|+++++. ++. .++|++|++++|...+.+
T Consensus 102 --~~~l~~L~~L~L~~N~l~~l~--------~~~l~~L~~L~l~~N~l~~l~----l~~-l~~L~~L~l~~n~~~~~~-- 164 (457)
T 3bz5_A 102 --VTPLTKLTYLNCDTNKLTKLD--------VSQNPLLTYLNCARNTLTEID----VSH-NTQLTELDCHLNKKITKL-- 164 (457)
T ss_dssp --CTTCTTCCEEECCSSCCSCCC--------CTTCTTCCEEECTTSCCSCCC----CTT-CTTCCEEECTTCSCCCCC--
T ss_pred --cCCCCcCCEEECCCCcCCeec--------CCCCCcCCEEECCCCccceec----ccc-CCcCCEEECCCCCccccc--
Confidence 899999999999999998852 788999999999999999873 333 357999999999665554
Q ss_pred ccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCC
Q 046544 181 EITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASL 260 (646)
Q Consensus 181 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 260 (646)
.+..+++|+.|++++|++++. | +..+++|+.|++++|++++. .+..+++|++|++++|++++ +| ++.+++|
T Consensus 165 ~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L 235 (457)
T 3bz5_A 165 DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQL 235 (457)
T ss_dssp CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTC
T ss_pred ccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCC
Confidence 488899999999999999975 4 88899999999999999975 38899999999999999997 45 8899999
Q ss_pred ceeecCCCccccccc-cccccc-------ccccccCCCCcccCCCCCccCccccceEEEcccccccccCcc--------c
Q 046544 261 RILSLSSNELTSIPL-TFWNLK-------DILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPT--------E 324 (646)
Q Consensus 261 ~~L~L~~N~l~~lp~-~~~~l~-------~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~--------~ 324 (646)
++|++++|.++.+|. .+..++ +|+.|++++|.+.+.+| ++.+++|+.|++++|...+.+|. .
T Consensus 236 ~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~ 313 (457)
T 3bz5_A 236 TYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELD 313 (457)
T ss_dssp SEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCC
T ss_pred CEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEec
Confidence 999999999998874 233333 45667777777666555 46778888889988876665553 2
Q ss_pred cCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccCCCCCCCCcc
Q 046544 325 IGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFAA 404 (646)
Q Consensus 325 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~ 404 (646)
++++++|++|++++|++++. + ++.+++|+.|++++|++++ ++.|..|++++|.++|. + .+..+..
T Consensus 314 l~~~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-~---~~~~l~~ 378 (457)
T 3bz5_A 314 LSQNPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-G---QTITMPK 378 (457)
T ss_dssp CTTCTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-E---EEEECCC
T ss_pred hhhcccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-c---eeeecCc
Confidence 55667788888888888864 2 7788888888888888875 24566777888888875 2 2345566
Q ss_pred ccccCCcccc
Q 046544 405 ESFEGNELLC 414 (646)
Q Consensus 405 ~~~~~N~~~c 414 (646)
++++.|.+..
T Consensus 379 l~l~~N~l~g 388 (457)
T 3bz5_A 379 ETLTNNSLTI 388 (457)
T ss_dssp BCCBTTBEEE
T ss_pred cccccCcEEE
Confidence 6777777553
No 38
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=6.7e-38 Score=349.51 Aligned_cols=314 Identities=19% Similarity=0.215 Sum_probs=277.5
Q ss_pred CCCCCCEEEccCCcccccCCccccCCCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCC
Q 046544 57 RLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCK 136 (646)
Q Consensus 57 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~ 136 (646)
.+++++.|++++|.++..++..|..+++|++|+|++|.|+++.|..|+++++|++|+|++|.|+.+++. .|++++
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~ 123 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH-----VFQNVP 123 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTCT
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHH-----HHcCCC
Confidence 477899999999999988777888899999999999999988888999999999999999999887653 478888
Q ss_pred CCCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEE
Q 046544 137 SLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLG 216 (646)
Q Consensus 137 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 216 (646)
+|++|+|++|.++++ .+..|.++++|++|+|++|.+.+.+|..|.++++|++|+
T Consensus 124 ~L~~L~L~~n~l~~l--------------------------~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 177 (597)
T 3oja_B 124 LLTVLVLERNDLSSL--------------------------PRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQ 177 (597)
T ss_dssp TCCEEECCSSCCCCC--------------------------CTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred CCCEEEeeCCCCCCC--------------------------CHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEE
Confidence 888888888877643 445678899999999999999999999999999999999
Q ss_pred eecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCC
Q 046544 217 LDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGP 296 (646)
Q Consensus 217 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~ 296 (646)
+++|.+++.. +..+++|+.|++++|.+.+. ...++|+.|++++|.++.+|..+. ++|+.|++++|.+++
T Consensus 178 L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~~--~~L~~L~L~~n~l~~- 246 (597)
T 3oja_B 178 LSSNRLTHVD---LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGPVN--VELTILKLQHNNLTD- 246 (597)
T ss_dssp CTTSCCSBCC---GGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCCEEECSCC--SCCCEEECCSSCCCC-
T ss_pred CcCCCCCCcC---hhhhhhhhhhhcccCccccc-----cCCchhheeeccCCcccccccccC--CCCCEEECCCCCCCC-
Confidence 9999999753 56688999999999999753 345689999999999998886553 689999999999986
Q ss_pred CCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCC
Q 046544 297 LPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKL 376 (646)
Q Consensus 297 ~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 376 (646)
+..+..+++|+.|++++|.+++..|..|+.+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+
T Consensus 247 -~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l 323 (597)
T 3oja_B 247 -TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQF 323 (597)
T ss_dssp -CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHH
T ss_pred -ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccC
Confidence 4778999999999999999999999999999999999999999995 6778888999999999999999 678888999
Q ss_pred CCCCceeCcCCcceeeccCCCCCCCCccccccCCccccCCC
Q 046544 377 SYLEDLNLSFNKLEGEIPRGGSFGNFAAESFEGNELLCGSP 417 (646)
Q Consensus 377 ~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~ 417 (646)
++|+.|+|++|++++.. ...++.++.+++++|+|.|+|.
T Consensus 324 ~~L~~L~L~~N~l~~~~--~~~~~~L~~L~l~~N~~~~~~~ 362 (597)
T 3oja_B 324 DRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCNSL 362 (597)
T ss_dssp TTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHHHH
T ss_pred CCCCEEECCCCCCCCcC--hhhcCCCCEEEeeCCCCCChhH
Confidence 99999999999999753 4457899999999999999763
No 39
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=4.3e-37 Score=319.88 Aligned_cols=307 Identities=24% Similarity=0.351 Sum_probs=211.4
Q ss_pred ccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEcccCccccccCccccCcCCC
Q 046544 30 IFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNL 109 (646)
Q Consensus 30 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 109 (646)
+..+++|++|++++|.+... +.+. .+++|++|++++|++++..+ +..+++|++|++++|.++++ +.|.++++|
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~-~~~~--~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L 112 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASI-QGIE--YLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNL 112 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCC-TTGG--GCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTC
T ss_pred chhcccccEEEEeCCccccc-hhhh--hcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcC
Confidence 44566777777777777542 3332 36677777777777764433 66677777777777776653 246677777
Q ss_pred CEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCC
Q 046544 110 EWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSI 189 (646)
Q Consensus 110 ~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 189 (646)
++|++++|.++..++ +.++++|++|++++|.... . +..+..+++|+
T Consensus 113 ~~L~l~~n~i~~~~~-------~~~l~~L~~L~l~~n~~~~--------------------------~-~~~~~~l~~L~ 158 (347)
T 4fmz_A 113 RELYLNEDNISDISP-------LANLTKMYSLNLGANHNLS--------------------------D-LSPLSNMTGLN 158 (347)
T ss_dssp SEEECTTSCCCCCGG-------GTTCTTCCEEECTTCTTCC--------------------------C-CGGGTTCTTCC
T ss_pred CEEECcCCcccCchh-------hccCCceeEEECCCCCCcc--------------------------c-ccchhhCCCCc
Confidence 777777777665421 5566666666666664322 1 22366667777
Q ss_pred EEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCc
Q 046544 190 TIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNE 269 (646)
Q Consensus 190 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 269 (646)
+|++++|.+.+..+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.
T Consensus 159 ~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~ 232 (347)
T 4fmz_A 159 YLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNK 232 (347)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred EEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCc
Confidence 77777777765444 6677777777777777764433 6677777777777777765443 6677777777777777
Q ss_pred ccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccc
Q 046544 270 LTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSF 349 (646)
Q Consensus 270 l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 349 (646)
++.+|. +..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++. ..+..+++|++|++++|++++..|..|
T Consensus 233 l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l 307 (347)
T 4fmz_A 233 ITDLSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVI 307 (347)
T ss_dssp CCCCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHH
T ss_pred cCCCcc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHh
Confidence 777765 66777777777777777653 3567777888888888888765 457778888888888888887888888
Q ss_pred cCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcce
Q 046544 350 GDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLE 390 (646)
Q Consensus 350 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 390 (646)
..+++|+.|++++|++++..| +..+++|++|++++|+++
T Consensus 308 ~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 308 GGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 888888888888888886655 778888888888888875
No 40
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=4.6e-37 Score=319.67 Aligned_cols=307 Identities=25% Similarity=0.366 Sum_probs=244.6
Q ss_pred ccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCCC
Q 046544 6 ISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKL 85 (646)
Q Consensus 6 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 85 (646)
+..+++|++|++++|.++.+ | .+..+++|++|+|++|.+++..+ +..+++|++|+|++|.+++. ..+..+++|
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~~~---~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L 112 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDISP---LSNLVKLTNLYIGTNKITDI--SALQNLTNL 112 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCCC--GGGTTCTTC
T ss_pred chhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccchh---hhcCCcCCEEEccCCcccCc--hHHcCCCcC
Confidence 45788999999999999854 3 48899999999999999987443 44599999999999999953 368999999
Q ss_pred cEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCc
Q 046544 86 SILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLK 165 (646)
Q Consensus 86 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~ 165 (646)
++|++++|.+.++.+ +..+++|++|++++|...... ..+.++++|++|++++|.+.++.+
T Consensus 113 ~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~------~~~~~l~~L~~L~l~~~~~~~~~~------------ 172 (347)
T 4fmz_A 113 RELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDL------SPLSNMTGLNYLTVTESKVKDVTP------------ 172 (347)
T ss_dssp SEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC------GGGTTCTTCCEEECCSSCCCCCGG------------
T ss_pred CEEECcCCcccCchh--hccCCceeEEECCCCCCcccc------cchhhCCCCcEEEecCCCcCCchh------------
Confidence 999999999997654 999999999999999655432 347889999999999998865421
Q ss_pred EEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCc
Q 046544 166 DFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNK 245 (646)
Q Consensus 166 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 245 (646)
+..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|+
T Consensus 173 ----------------~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~ 232 (347)
T 4fmz_A 173 ----------------IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNK 232 (347)
T ss_dssp ----------------GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred ----------------hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCc
Confidence 5566677777777777765443 6677777777777777775444 6777777777777777
Q ss_pred ccccCCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCcccc
Q 046544 246 LFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEI 325 (646)
Q Consensus 246 i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~ 325 (646)
+++..+ +..+++|+.|++++|.++.++ .+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..|
T Consensus 233 l~~~~~--~~~l~~L~~L~l~~n~l~~~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l 307 (347)
T 4fmz_A 233 ITDLSP--LANLSQLTWLEIGTNQISDIN-AVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVI 307 (347)
T ss_dssp CCCCGG--GTTCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHH
T ss_pred cCCCcc--hhcCCCCCEEECCCCccCCCh-hHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHh
Confidence 765444 777777888888888777764 566777888888888887754 357788899999999999998888889
Q ss_pred CCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCc
Q 046544 326 GGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLS 366 (646)
Q Consensus 326 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 366 (646)
+.+++|++|++++|++++..| +..+++|++|++++|.|+
T Consensus 308 ~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 308 GGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 999999999999999997766 888999999999999886
No 41
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.1e-37 Score=316.94 Aligned_cols=256 Identities=32% Similarity=0.524 Sum_probs=242.9
Q ss_pred ccCcEEEeecccccc--cCCcccccCCCCCEEEccC-CccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcE
Q 046544 162 HSLKDFYMSNCNVSG--GIPEEITNLTNSITIDLGG-NKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYE 238 (646)
Q Consensus 162 ~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 238 (646)
.+++.|+|++|.+++ .+|..+.++++|++|++++ |.+.+.+|..|.++++|++|+|++|.+++.+|..|..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 468889999999988 8899999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EEecCCcccccCCccccCCCCCceeecCCCccc-cccccccccc-ccccccCCCCcccCCCCCccCccccceEEEccccc
Q 046544 239 LELGGNKLFGSIPACFSNLASLRILSLSSNELT-SIPLTFWNLK-DILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNN 316 (646)
Q Consensus 239 L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~ 316 (646)
|+|++|++++..|..|..+++|++|++++|.++ .+|..+..++ .|+.|++++|.+++..|..+..++ |+.|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 999999999999999999999999999999999 8899999998 999999999999999999999998 9999999999
Q ss_pred ccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccCC
Q 046544 317 FSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRG 396 (646)
Q Consensus 317 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 396 (646)
+++..|..|+.+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|++|+|++|++++.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9999999999999999999999999976665 889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCccccCCCCc
Q 046544 397 GSFGNFAAESFEGNELLCGSPTL 419 (646)
Q Consensus 397 ~~~~~~~~~~~~~N~~~c~~~~~ 419 (646)
..++.++.+++.+|++.|+.|..
T Consensus 288 ~~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 288 GNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp TTGGGSCGGGTCSSSEEESTTSS
T ss_pred ccccccChHHhcCCCCccCCCCC
Confidence 88999999999999999998764
No 42
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.3e-35 Score=304.75 Aligned_cols=288 Identities=24% Similarity=0.284 Sum_probs=163.1
Q ss_pred CCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEcccCccccccCccccCcCCCCEEEc
Q 046544 35 MLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNL 114 (646)
Q Consensus 35 ~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 114 (646)
+++.+++++|.++..+..+ .++|++|+|++|++++..|..|.++++|++|+|++|+++++.|..|+++++|++|+|
T Consensus 34 ~l~~l~~~~~~l~~ip~~~----~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLKAVPKEI----SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCSSCCSCC----CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCccccCCCC----CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 5777777777776533322 246777777777777666667777777777777777777666667777777777777
Q ss_pred cCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEcc
Q 046544 115 RDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLG 194 (646)
Q Consensus 115 ~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 194 (646)
++|+++.++..+ . ++|++|++++|++. +..+..+..+++|++|+++
T Consensus 110 ~~n~l~~l~~~~------~--~~L~~L~l~~n~i~--------------------------~~~~~~~~~l~~L~~L~l~ 155 (332)
T 2ft3_A 110 SKNHLVEIPPNL------P--SSLVELRIHDNRIR--------------------------KVPKGVFSGLRNMNCIEMG 155 (332)
T ss_dssp CSSCCCSCCSSC------C--TTCCEEECCSSCCC--------------------------CCCSGGGSSCSSCCEEECC
T ss_pred CCCcCCccCccc------c--ccCCEEECCCCccC--------------------------ccCHhHhCCCccCCEEECC
Confidence 777776554321 1 44555555544443 3344556666777777777
Q ss_pred CCcccc--ccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccc
Q 046544 195 GNKLNG--SIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTS 272 (646)
Q Consensus 195 ~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 272 (646)
+|.++. ..|..|..+ +|++|++++|++++ +|..+. ++|++|++++|++++..+..|.++++|+.|++++|.++.
T Consensus 156 ~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~ 231 (332)
T 2ft3_A 156 GNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRM 231 (332)
T ss_dssp SCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCC
T ss_pred CCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCc
Confidence 776642 455555555 66666666666653 333222 355555555555554444555555555555555555544
Q ss_pred cccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCC
Q 046544 273 IPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDL 352 (646)
Q Consensus 273 lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 352 (646)
+ .+..+..+++|+.|++++|.++ .+|..+..+++|++|++++|++++..+..|...
T Consensus 232 ~-----------------------~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~ 287 (332)
T 2ft3_A 232 I-----------------------ENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPV 287 (332)
T ss_dssp C-----------------------CTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCS
T ss_pred C-----------------------ChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcccc
Confidence 4 3334444444555555555554 234445555555555555555554444444432
Q ss_pred ------CCCCEEEccCCcCc--ccCCccccCCCCCCceeCcCCc
Q 046544 353 ------ISLKFLNLSNNNLS--GAIPTSLEKLSYLEDLNLSFNK 388 (646)
Q Consensus 353 ------~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~ 388 (646)
++|+.|++++|.+. +..|..|..+++|+.+++++|+
T Consensus 288 ~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 288 GFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 44566666666655 4555566666666666666653
No 43
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2e-35 Score=305.27 Aligned_cols=297 Identities=25% Similarity=0.263 Sum_probs=223.2
Q ss_pred CCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEE
Q 046544 10 QNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKLSILE 89 (646)
Q Consensus 10 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 89 (646)
.+++.+++++|+++. +|..+. ++|++|+|++|.+++.++. .+..+++|++|+|++|++++..|..|.++++|++|+
T Consensus 33 c~l~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~i~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKA-VPKEIS--PDTTLLDLQNNDISELRKD-DFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp EETTEEECCSSCCSS-CCSCCC--TTCCEEECCSSCCCEECTT-TTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred ccCCEEECCCCCccc-cCCCCC--CCCeEEECCCCcCCccCHh-HhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 379999999999984 555553 6899999999999875443 334599999999999999999899999999999999
Q ss_pred cccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEe
Q 046544 90 LSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYM 169 (646)
Q Consensus 90 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L 169 (646)
|++|+++.+.+..+ ++|++|++++|+++.+++. .|.++++|++|++++|.++..
T Consensus 109 L~~n~l~~l~~~~~---~~L~~L~l~~n~i~~~~~~-----~~~~l~~L~~L~l~~n~l~~~------------------ 162 (332)
T 2ft3_A 109 ISKNHLVEIPPNLP---SSLVELRIHDNRIRKVPKG-----VFSGLRNMNCIEMGGNPLENS------------------ 162 (332)
T ss_dssp CCSSCCCSCCSSCC---TTCCEEECCSSCCCCCCSG-----GGSSCSSCCEEECCSCCCBGG------------------
T ss_pred CCCCcCCccCcccc---ccCCEEECCCCccCccCHh-----HhCCCccCCEEECCCCccccC------------------
Confidence 99999996655444 8999999999999987653 478899999999999988642
Q ss_pred ecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCccccc
Q 046544 170 SNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGS 249 (646)
Q Consensus 170 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 249 (646)
+..|..+..+ +|+.|++++|++++. |..+. ++|++|++++|.+++..+..|..+++|++|+|++|++++.
T Consensus 163 ------~~~~~~~~~l-~L~~L~l~~n~l~~l-~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~ 232 (332)
T 2ft3_A 163 ------GFEPGAFDGL-KLNYLRISEAKLTGI-PKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMI 232 (332)
T ss_dssp ------GSCTTSSCSC-CCSCCBCCSSBCSSC-CSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCC
T ss_pred ------CCCcccccCC-ccCEEECcCCCCCcc-Ccccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcC
Confidence 1234555666 777788888887754 33332 5788888888888877778888888888888888888877
Q ss_pred CCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCC
Q 046544 250 IPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLK 329 (646)
Q Consensus 250 ~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~ 329 (646)
.+..|..+++|+.|++++|.++.+|..+..+++|+.|++++|.+++..+..|..... -....
T Consensus 233 ~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~------------------~~~~~ 294 (332)
T 2ft3_A 233 ENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGF------------------GVKRA 294 (332)
T ss_dssp CTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSC------------------CSSSC
T ss_pred ChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCCCCCCccChhHcccccc------------------ccccc
Confidence 777888888888888888888888877777777777777777776555444433210 01134
Q ss_pred CCCEEEccCccCC--CcccccccCCCCCCEEEccCCc
Q 046544 330 NLEYLFLGYNRLE--GSIPDSFGDLISLKFLNLSNNN 364 (646)
Q Consensus 330 ~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~ 364 (646)
.|+.|++++|++. +..|..|..+++|+.+++++|+
T Consensus 295 ~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 295 YYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 5666777777665 4566667777777777777664
No 44
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=6.1e-35 Score=301.37 Aligned_cols=249 Identities=23% Similarity=0.297 Sum_probs=142.6
Q ss_pred CCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEcccCccccccCccccCcCCCCEEEc
Q 046544 35 MLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNL 114 (646)
Q Consensus 35 ~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 114 (646)
+++.++++++.++..+..+ .++|++|+|++|++++..+..|.++++|++|+|++|.++++.|..|+++++|++|+|
T Consensus 32 ~l~~l~~~~~~l~~lp~~~----~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 32 HLRVVQCSDLGLEKVPKDL----PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp ETTEEECTTSCCCSCCCSC----CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCeEEEecCCCccccCccC----CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 5667777777665533222 246667777777776666666667777777777777777666666777777777777
Q ss_pred cCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEcc
Q 046544 115 RDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLG 194 (646)
Q Consensus 115 ~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 194 (646)
++|+++.++..+ .++|++|++++|.+. +..+..+..+++|++|+++
T Consensus 108 s~n~l~~l~~~~--------~~~L~~L~l~~n~l~--------------------------~~~~~~~~~l~~L~~L~l~ 153 (330)
T 1xku_A 108 SKNQLKELPEKM--------PKTLQELRVHENEIT--------------------------KVRKSVFNGLNQMIVVELG 153 (330)
T ss_dssp CSSCCSBCCSSC--------CTTCCEEECCSSCCC--------------------------BBCHHHHTTCTTCCEEECC
T ss_pred CCCcCCccChhh--------cccccEEECCCCccc--------------------------ccCHhHhcCCccccEEECC
Confidence 777666554321 145555555555544 3444556666666666666
Q ss_pred CCcccc--ccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccc
Q 046544 195 GNKLNG--SIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTS 272 (646)
Q Consensus 195 ~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 272 (646)
+|.+.. ..+..|.++++|++|++++|.++. +|..+. ++|++|++++|++++..+..|.++++|+.|++++|.++.
T Consensus 154 ~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 230 (330)
T 1xku_A 154 TNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230 (330)
T ss_dssp SSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCE
T ss_pred CCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCce
Confidence 666643 455566666666666666666663 333332 566666666666666556666666666666666666655
Q ss_pred ccc-ccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCcccc
Q 046544 273 IPL-TFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEI 325 (646)
Q Consensus 273 lp~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~ 325 (646)
++. .+..+++|+.|++++|.++ .+|..+..+++|+.|++++|.++++.+..|
T Consensus 231 ~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f 283 (330)
T 1xku_A 231 VDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDF 283 (330)
T ss_dssp ECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSS
T ss_pred eChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhc
Confidence 443 3444444444444444444 233334444444444444444444333333
No 45
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.4e-34 Score=298.74 Aligned_cols=298 Identities=22% Similarity=0.211 Sum_probs=237.7
Q ss_pred CCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEE
Q 046544 10 QNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKLSILE 89 (646)
Q Consensus 10 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 89 (646)
.++++++++++.++. +|..+. ++|++|+|++|+|++.++. .+..+++|++|+|++|++++..|..|..+++|++|+
T Consensus 31 c~l~~l~~~~~~l~~-lp~~~~--~~l~~L~L~~n~i~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 31 CHLRVVQCSDLGLEK-VPKDLP--PDTALLDLQNNKITEIKDG-DFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp EETTEEECTTSCCCS-CCCSCC--TTCCEEECCSSCCCCBCTT-TTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCCeEEEecCCCccc-cCccCC--CCCeEEECCCCcCCEeChh-hhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 378999999999985 555553 6899999999999875543 334599999999999999988899999999999999
Q ss_pred cccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEe
Q 046544 90 LSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYM 169 (646)
Q Consensus 90 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L 169 (646)
|++|+++.+... +. ++|++|++++|+++.+++ ..|.++++|++|++++|.+...
T Consensus 107 Ls~n~l~~l~~~-~~--~~L~~L~l~~n~l~~~~~-----~~~~~l~~L~~L~l~~n~l~~~------------------ 160 (330)
T 1xku_A 107 LSKNQLKELPEK-MP--KTLQELRVHENEITKVRK-----SVFNGLNQMIVVELGTNPLKSS------------------ 160 (330)
T ss_dssp CCSSCCSBCCSS-CC--TTCCEEECCSSCCCBBCH-----HHHTTCTTCCEEECCSSCCCGG------------------
T ss_pred CCCCcCCccChh-hc--ccccEEECCCCcccccCH-----hHhcCCccccEEECCCCcCCcc------------------
Confidence 999999965444 33 799999999999998753 3478899999999999988642
Q ss_pred ecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCccccc
Q 046544 170 SNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGS 249 (646)
Q Consensus 170 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 249 (646)
+..+..+..+++|+.|++++|+++.. |..+. ++|++|++++|++++..|..|..+++|++|+|++|++++.
T Consensus 161 ------~~~~~~~~~l~~L~~L~l~~n~l~~l-~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 231 (330)
T 1xku_A 161 ------GIENGAFQGMKKLSYIRIADTNITTI-PQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAV 231 (330)
T ss_dssp ------GBCTTGGGGCTTCCEEECCSSCCCSC-CSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEE
T ss_pred ------CcChhhccCCCCcCEEECCCCccccC-Ccccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCcee
Confidence 13466788889999999999998854 43333 7899999999999988888999999999999999999988
Q ss_pred CCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCC
Q 046544 250 IPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLK 329 (646)
Q Consensus 250 ~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~ 329 (646)
.+..|..+++|+.|++++|.++.+|..+..+++|++|++++|.+++..+..|.... .....+
T Consensus 232 ~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~------------------~~~~~~ 293 (330)
T 1xku_A 232 DNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG------------------YNTKKA 293 (330)
T ss_dssp CTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS------------------CCTTSC
T ss_pred ChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECCCCcCCccChhhcCCcc------------------cccccc
Confidence 88889999999999999999999999898999999999999999877766664331 011234
Q ss_pred CCCEEEccCccCCC--cccccccCCCCCCEEEccCCc
Q 046544 330 NLEYLFLGYNRLEG--SIPDSFGDLISLKFLNLSNNN 364 (646)
Q Consensus 330 ~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~ 364 (646)
.|+.|++++|++.. ..|..|..+.+++.++|++|+
T Consensus 294 ~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 294 SYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cccceEeecCcccccccCccccccccceeEEEecccC
Confidence 56667777776653 456677777777777777764
No 46
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=3.5e-38 Score=341.31 Aligned_cols=359 Identities=20% Similarity=0.211 Sum_probs=219.9
Q ss_pred CCCCEEECCCCcccccCCcC-ccCCCCCCEEECcCCcCccc----CCccCcCCCCCCCEEEccCCcccccCCcccc-CCC
Q 046544 10 QNLEELDLRHNKLVGTVPAA-IFNMSMLKLLHLQNNSLLGC----LSSIADVRLPNLEALLLWGNNFSGTIPRFIF-NAS 83 (646)
Q Consensus 10 ~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~ 83 (646)
++|++|||++|+++...... +..+++|++|+|++|.++.. ++. ....+++|++|+|++|.+++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~-~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISS-ALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHH-HHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHH-HHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 45677777777776443333 66677777777777776531 111 111256666666666666543333222 233
Q ss_pred ----CCcEEEcccCcccc----ccCccccCcCCCCEEEccCCCCCCCCCccccccc-CCCCCCCCEEECCCCCCCCcCCc
Q 046544 84 ----KLSILELSQNSFSG----FIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSS-LSNCKSLTFIHLSDNPLDGILSK 154 (646)
Q Consensus 84 ----~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~ 154 (646)
+|++|+|++|.|+. ..+..|..+++|++|+|++|.++...... +... ....++|++|++++|.++.....
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~-l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 160 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQL-LCEGLLDPQCRLEKLQLEYCSLSAASCE 160 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHH-HHHHHTSTTCCCCEEECTTSCCBGGGHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHH-HHHHHhcCCCcceEEECCCCCCCHHHHH
Confidence 46666666666663 23555666666666666666654321110 0001 22234555555555555432110
Q ss_pred chhccccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCcccc-----CCCCCCeEEeecccccCc----
Q 046544 155 TSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLS-----KLQKLQGLGLDDNKLEGS---- 225 (646)
Q Consensus 155 ~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~---- 225 (646)
.++..+..+++|++|++++|.+.+..+..+. ..++|++|++++|.+++.
T Consensus 161 ----------------------~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 218 (461)
T 1z7x_W 161 ----------------------PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRD 218 (461)
T ss_dssp ----------------------HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHH
T ss_pred ----------------------HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHH
Confidence 1244555667777777777776654444333 245777777777777653
Q ss_pred CchhhcCCCCCcEEEecCCcccccC-----CccccCCCCCceeecCCCcccc-----cccccccccccccccCCCCcccC
Q 046544 226 IPDSICRLTELYELELGGNKLFGSI-----PACFSNLASLRILSLSSNELTS-----IPLTFWNLKDILQLNFSSNFLTG 295 (646)
Q Consensus 226 ~~~~~~~l~~L~~L~L~~N~i~~~~-----~~~~~~l~~L~~L~L~~N~l~~-----lp~~~~~l~~L~~L~l~~N~l~~ 295 (646)
++..+..+++|++|++++|++.+.. +..+..+++|++|++++|.++. ++..+..+++|+.|++++|.+++
T Consensus 219 l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 298 (461)
T 1z7x_W 219 LCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGD 298 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHH
T ss_pred HHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCch
Confidence 4566666777777777777765432 2333456777777777777775 55566667777777777777654
Q ss_pred CCCCccCc-----cccceEEEccccccccc----CccccCCCCCCCEEEccCccCCCcccccccC-----CCCCCEEEcc
Q 046544 296 PLPLEIGN-----LKVLIGIDFSMNNFSSV----IPTEIGGLKNLEYLFLGYNRLEGSIPDSFGD-----LISLKFLNLS 361 (646)
Q Consensus 296 ~~~~~~~~-----l~~L~~L~ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls 361 (646)
..+..+.. .++|+.|++++|.+++. .+..+..+++|++|++++|++++..+..+.. .++|++|+|+
T Consensus 299 ~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 378 (461)
T 1z7x_W 299 EGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLA 378 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECC
Confidence 33333332 25788888888887765 3555667788888888888887665554443 5688888888
Q ss_pred CCcCcc----cCCccccCCCCCCceeCcCCcceee
Q 046544 362 NNNLSG----AIPTSLEKLSYLEDLNLSFNKLEGE 392 (646)
Q Consensus 362 ~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~ 392 (646)
+|++++ .+|..+..+++|++|++++|++++.
T Consensus 379 ~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 379 DCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp TSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred CCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 888875 6777788888888888888888753
No 47
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.1e-34 Score=296.62 Aligned_cols=188 Identities=31% Similarity=0.492 Sum_probs=131.3
Q ss_pred CCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCC-CCcEEEecCCcccccCCccccC
Q 046544 178 IPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLT-ELYELELGGNKLFGSIPACFSN 256 (646)
Q Consensus 178 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~ 256 (646)
.|..+..+++|++|++++|++.+..|..|..+++|++|++++|++++.+|..+..++ +|++|++++|++++..|..|..
T Consensus 117 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~ 196 (313)
T 1ogq_A 117 IPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN 196 (313)
T ss_dssp CCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGG
T ss_pred CCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhC
Confidence 444455555555555555555555555555555555555555555555555555554 5555555555555444444444
Q ss_pred CCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEc
Q 046544 257 LASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFL 336 (646)
Q Consensus 257 l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L 336 (646)
+ + |+.|++++|.+++..|..|..+++|+.|++++|.+++..|. +..+++|++|+|
T Consensus 197 l-----------------------~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L 251 (313)
T 1ogq_A 197 L-----------------------N-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDL 251 (313)
T ss_dssp C-----------------------C-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEEC
T ss_pred C-----------------------c-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEEC
Confidence 4 3 55555555555555666677777888888888888766555 788899999999
Q ss_pred cCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCccee
Q 046544 337 GYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEG 391 (646)
Q Consensus 337 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 391 (646)
++|++++.+|..|..+++|+.|+|++|++++.+|.. ..+++|+.+++++|+.-+
T Consensus 252 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc 305 (313)
T 1ogq_A 252 RNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLC 305 (313)
T ss_dssp CSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEE
T ss_pred cCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCcc
Confidence 999999899999999999999999999999988886 889999999999999443
No 48
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=3.1e-37 Score=333.84 Aligned_cols=366 Identities=20% Similarity=0.166 Sum_probs=236.5
Q ss_pred ccCCCCCCEEECCCCcccc----cCCcCccCCCCCCEEECcCCcCcccCCccCcCCCC----CCCEEEccCCcccc----
Q 046544 6 ISNLQNLEELDLRHNKLVG----TVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLP----NLEALLLWGNNFSG---- 73 (646)
Q Consensus 6 ~~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~----~L~~L~L~~N~l~~---- 73 (646)
+..+++|++|+|++|++++ .++.++..+++|++|+|++|.+...........++ +|++|+|++|+++.
T Consensus 24 ~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~ 103 (461)
T 1z7x_W 24 LPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCG 103 (461)
T ss_dssp HHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHH
T ss_pred HhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHH
Confidence 5678999999999999984 34678888999999999999996532211111244 79999999999994
Q ss_pred cCCccccCCCCCcEEEcccCccccccCcccc-----CcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCC
Q 046544 74 TIPRFIFNASKLSILELSQNSFSGFIPNTFG-----NLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPL 148 (646)
Q Consensus 74 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 148 (646)
.++..+..+++|++|+|++|.+++..+..+. ..++|++|+|++|+++...... ++..+..+++|++|++++|.+
T Consensus 104 ~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~-l~~~l~~~~~L~~L~L~~n~i 182 (461)
T 1z7x_W 104 VLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP-LASVLRAKPDFKELTVSNNDI 182 (461)
T ss_dssp HHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH-HHHHHHHCTTCCEEECCSSBC
T ss_pred HHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH-HHHHHhhCCCCCEEECcCCCc
Confidence 5688999999999999999999865554433 3568999999999998643211 344567789999999999998
Q ss_pred CCcCCcchhccc---cccCcEEEeeccccccc----CCcccccCCCCCEEEccCCcccccc-----CccccCCCCCCeEE
Q 046544 149 DGILSKTSIGNL---SHSLKDFYMSNCNVSGG----IPEEITNLTNSITIDLGGNKLNGSI-----PITLSKLQKLQGLG 216 (646)
Q Consensus 149 ~~~~~~~~~~~~---~~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~ 216 (646)
...........+ .++|++|++++|.+++. ++..+..+++|++|++++|++.+.. +..+..+++|++|+
T Consensus 183 ~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~ 262 (461)
T 1z7x_W 183 NEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLW 262 (461)
T ss_dssp HHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEE
T ss_pred chHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEE
Confidence 653222111111 23677777777766653 3555666666666676666665432 22233456666666
Q ss_pred eecccccCc----CchhhcCCCCCcEEEecCCcccccCCccccC-----CCCCceeecCCCccccccccccccccccccc
Q 046544 217 LDDNKLEGS----IPDSICRLTELYELELGGNKLFGSIPACFSN-----LASLRILSLSSNELTSIPLTFWNLKDILQLN 287 (646)
Q Consensus 217 L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~-----l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ 287 (646)
+++|.+++. ++..+..+++|++|++++|.+.+..+..+.. .++|+.|++++|.++.....
T Consensus 263 L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~----------- 331 (461)
T 1z7x_W 263 IWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCS----------- 331 (461)
T ss_dssp CTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH-----------
T ss_pred CcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHH-----------
Confidence 666666543 3455555666666666666665433332222 24555555555555432100
Q ss_pred CCCCcccCCCCCccCccccceEEEcccccccccCccccCC-----CCCCCEEEccCccCCC----cccccccCCCCCCEE
Q 046544 288 FSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGG-----LKNLEYLFLGYNRLEG----SIPDSFGDLISLKFL 358 (646)
Q Consensus 288 l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L 358 (646)
.++..+..+++|+.|++++|.+++..+..+.. .++|++|++++|++++ .+|..+..+++|++|
T Consensus 332 --------~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L 403 (461)
T 1z7x_W 332 --------HFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLREL 403 (461)
T ss_dssp --------HHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEE
T ss_pred --------HHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEE
Confidence 02333444566666666666665544433321 5678888888888875 567777778888888
Q ss_pred EccCCcCcccCCcccc-----CCCCCCceeCcCCccee
Q 046544 359 NLSNNNLSGAIPTSLE-----KLSYLEDLNLSFNKLEG 391 (646)
Q Consensus 359 ~Ls~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~ 391 (646)
++++|++++.....+. ....|+.|++.++.+..
T Consensus 404 ~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~ 441 (461)
T 1z7x_W 404 DLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 441 (461)
T ss_dssp ECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred ECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCH
Confidence 8888888754222221 23456777776666654
No 49
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=5.1e-34 Score=287.26 Aligned_cols=149 Identities=30% Similarity=0.497 Sum_probs=133.6
Q ss_pred CCCCcceeecccccceEEEEEeC------CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKAL 565 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~l 565 (646)
++|...+.||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++++|.+++..|+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46778899999999999999863 478899999987666667889999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhCC------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEE
Q 046544 566 VLEYKPHGSLEKYLYSSN------------CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYL 633 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~~------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki 633 (646)
|||||++|+|.+++...+ ..+++.++..|+.||++||+||| +++||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999997642 46899999999999999999999 889999999999999999999999
Q ss_pred EeecCccccc
Q 046544 634 SDFGIAKLLI 643 (646)
Q Consensus 634 ~DfGla~~~~ 643 (646)
+|||+|+...
T Consensus 170 ~DFGla~~~~ 179 (299)
T 4asz_A 170 GDFGMSRDVY 179 (299)
T ss_dssp CCCSCHHHHT
T ss_pred CCcccceecC
Confidence 9999998653
No 50
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.6e-33 Score=287.16 Aligned_cols=148 Identities=27% Similarity=0.331 Sum_probs=136.9
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEec
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYK 570 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 570 (646)
+.|+..+.||+|+||+||+|+++ +|+.||||++........+.+.+|+++++.++|||||++++++.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46888999999999999999975 79999999998766555677889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccccC
Q 046544 571 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644 (646)
Q Consensus 571 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~~ 644 (646)
+||+|.+++... .+++.++..++.||+.||+||| +++||||||||+|||++.++.+||+|||+|+.+.+
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 999999999764 5899999999999999999999 88999999999999999999999999999997653
No 51
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.5e-33 Score=286.20 Aligned_cols=149 Identities=23% Similarity=0.400 Sum_probs=130.3
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 568 (646)
++|+..+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 68999999999999999999964 69999999998653 3345689999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 569 YKPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||+||+|.+++...+ ..+++.++..|+.||+.||+||| +++||||||||+|||++.++.+||+|||+|+.+.
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 176 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN 176 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCC
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeec
Confidence 999999999997654 45789999999999999999999 8999999999999999999999999999999764
No 52
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.7e-33 Score=282.71 Aligned_cols=148 Identities=30% Similarity=0.452 Sum_probs=136.1
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
++|+..+.||+|+||+||+|+.. +|+.||||++.+.. ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 56999999999999999999864 79999999997542 334577899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|||+||+|.+++...+ .+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 9999999999997754 6899999999999999999999 8999999999999999999999999999999864
No 53
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=286.84 Aligned_cols=149 Identities=29% Similarity=0.476 Sum_probs=130.4
Q ss_pred CCCCcceeecccccceEEEEEeC------CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKAL 565 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~l 565 (646)
++|...++||+|+||+||+|+++ +++.||||+++.......++|.+|++++++++|||||+++++|.+++..|+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 35667789999999999999864 478899999987666667889999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcE
Q 046544 566 VLEYKPHGSLEKYLYSSN--------------CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVA 631 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~~--------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ 631 (646)
|||||++|+|.++++... ..+++.++..|+.||++||+||| .++||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 999999999999997642 35899999999999999999999 8899999999999999999999
Q ss_pred EEEeecCccccc
Q 046544 632 YLSDFGIAKLLI 643 (646)
Q Consensus 632 ki~DfGla~~~~ 643 (646)
||+|||+|+.+.
T Consensus 198 Ki~DFGla~~~~ 209 (329)
T 4aoj_A 198 KIGDFGMSRDIY 209 (329)
T ss_dssp EECCCC------
T ss_pred EEcccccceecc
Confidence 999999998764
No 54
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=7.9e-33 Score=289.03 Aligned_cols=148 Identities=27% Similarity=0.331 Sum_probs=137.4
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEec
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYK 570 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 570 (646)
+.|+..+.||+|+||+||+|+.+ +|+.||||++........+.+.+|+++|+.++|||||++++++.+++..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56899999999999999999965 69999999998776666677899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccccC
Q 046544 571 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644 (646)
Q Consensus 571 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~~ 644 (646)
+||+|.+++... .+++.++..|+.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 999999999765 4899999999999999999999 88999999999999999999999999999997653
No 55
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=8.3e-33 Score=278.37 Aligned_cols=146 Identities=29% Similarity=0.511 Sum_probs=130.4
Q ss_pred CCCCcceeecccccceEEEEEeCCCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEe
Q 046544 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 569 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 569 (646)
++++..++||+|+||+||+|++++ .||||+++... ....++|.+|++++++++|||||++++++.. +..|+||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 567888999999999999998753 59999987543 3445789999999999999999999998864 568999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 570 KPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 570 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|+||+|.+++...+..+++.++..|+.|||+||+||| +++||||||||+|||+++++.+||+|||+|+...
T Consensus 113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 183 (307)
T 3omv_A 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC--
T ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecc
Confidence 9999999999877778999999999999999999999 8899999999999999999999999999998753
No 56
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-32 Score=284.77 Aligned_cols=280 Identities=19% Similarity=0.165 Sum_probs=165.6
Q ss_pred CCEEEccCCcccccCCccccCCCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCE
Q 046544 61 LEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTF 140 (646)
Q Consensus 61 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~ 140 (646)
....++++|.++ .+|..+. ++|++|++++|.++++.+..|.++++|++|+|++|+++.+++ ..|.++++|++
T Consensus 33 ~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-----~~~~~l~~L~~ 104 (353)
T 2z80_A 33 NGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEE-----DSFSSLGSLEH 104 (353)
T ss_dssp TSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECT-----TTTTTCTTCCE
T ss_pred CeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCH-----hhcCCCCCCCE
Confidence 334455555555 2333322 245555555555555544455555555555555555554322 23445555555
Q ss_pred EECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccC-ccccCCCCCCeEEeec
Q 046544 141 IHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIP-ITLSKLQKLQGLGLDD 219 (646)
Q Consensus 141 L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~ 219 (646)
|++++|+++++ .+..+..+++|++|++++|++++..+ ..|.++++|++|++++
T Consensus 105 L~Ls~n~l~~~--------------------------~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~ 158 (353)
T 2z80_A 105 LDLSYNYLSNL--------------------------SSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGN 158 (353)
T ss_dssp EECCSSCCSSC--------------------------CHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEE
T ss_pred EECCCCcCCcC--------------------------CHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCC
Confidence 55555544332 12334555556666666666654443 4566666666666666
Q ss_pred c-cccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccccccc-cccccccccCCCCcccCCC
Q 046544 220 N-KLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFW-NLKDILQLNFSSNFLTGPL 297 (646)
Q Consensus 220 N-~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~-~l~~L~~L~l~~N~l~~~~ 297 (646)
| .+.+..+..|.++++|++|++++|++.+..|..|..+++|++|++++|.++.+|..+. .+++|+.|++++|.+++..
T Consensus 159 n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~ 238 (353)
T 2z80_A 159 MDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFH 238 (353)
T ss_dssp SSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCC
T ss_pred CccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccc
Confidence 6 3555556666777777777777777766666777777777777777777766655432 3455555555555555433
Q ss_pred CCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCC----cccccccCCCCCCEEEccCCcCcccCCccc
Q 046544 298 PLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEG----SIPDSFGDLISLKFLNLSNNNLSGAIPTSL 373 (646)
Q Consensus 298 ~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 373 (646)
+..+.. ......++.+++++|.+++ .+|+.+..+++|+.|+|++|+++...+..|
T Consensus 239 ~~~l~~---------------------~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~ 297 (353)
T 2z80_A 239 FSELST---------------------GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIF 297 (353)
T ss_dssp CC---------------------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTT
T ss_pred cccccc---------------------ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHH
Confidence 222111 1123456666666666654 467788888999999999999984444446
Q ss_pred cCCCCCCceeCcCCcceeeccC
Q 046544 374 EKLSYLEDLNLSFNKLEGEIPR 395 (646)
Q Consensus 374 ~~l~~L~~L~L~~N~l~~~~p~ 395 (646)
..+++|++|++++|+++|.+|.
T Consensus 298 ~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 298 DRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp TTCTTCCEEECCSSCBCCCHHH
T ss_pred hcCCCCCEEEeeCCCccCcCCC
Confidence 8899999999999999988773
No 57
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.98 E-value=8.6e-33 Score=279.52 Aligned_cols=148 Identities=25% Similarity=0.430 Sum_probs=130.6
Q ss_pred CCCcceeecccccceEEEEEeC------CCcEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEE
Q 046544 493 GFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKAL 565 (646)
Q Consensus 493 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~l 565 (646)
.++..+.||+|+||+||+|++. +++.||||+++... ....++|.+|+.++++++|||||+++|+|..++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3556789999999999999863 46889999987543 3345789999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCc
Q 046544 566 VLEYKPHGSLEKYLYSSN---------------CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLV 630 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~ 630 (646)
|||||++|+|.+++.... ..+++.++.+|+.|||+||+||| +++||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCC
Confidence 999999999999996532 35899999999999999999999 889999999999999999999
Q ss_pred EEEEeecCccccc
Q 046544 631 AYLSDFGIAKLLI 643 (646)
Q Consensus 631 ~ki~DfGla~~~~ 643 (646)
+||+|||+|+.+.
T Consensus 184 ~Ki~DFGlar~~~ 196 (308)
T 4gt4_A 184 VKISDLGLFREVY 196 (308)
T ss_dssp EEECCSCCBCGGG
T ss_pred EEECCcccceecc
Confidence 9999999998763
No 58
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.98 E-value=3e-32 Score=269.86 Aligned_cols=148 Identities=26% Similarity=0.473 Sum_probs=127.1
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALV 566 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv 566 (646)
.++|+..+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+++++.++|||||++++++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 368999999999999999999864 79999999997543 23356789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 567 LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|||| +|+|.+++...+ .+++.++..++.|++.|++|+| +++|+||||||+|||+++++.+||+|||+|+...
T Consensus 92 mEy~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred EeCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 9999 679999998765 6899999999999999999999 8899999999999999999999999999998764
No 59
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.98 E-value=4.7e-32 Score=276.61 Aligned_cols=254 Identities=20% Similarity=0.185 Sum_probs=184.2
Q ss_pred cCcEEEeecccccccCCcccccCCCCCEEEccCCccccc--cCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEE
Q 046544 163 SLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGS--IPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELE 240 (646)
Q Consensus 163 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 240 (646)
++++|++++|+++...+..|..+++|++|++++|+++.. .+..+..+++|++|++++|.+. .+|..+..+++|++|+
T Consensus 29 ~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~ 107 (306)
T 2z66_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLD 107 (306)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEE
T ss_pred CCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEE
Confidence 344444444444444445567777777777777777633 2556666777777777777777 4556677777778888
Q ss_pred ecCCcccccCC-ccccCCCCCceeecCCCccccc-ccccccccccccccCCCCcccC-CCCCccCccccceEEEcccccc
Q 046544 241 LGGNKLFGSIP-ACFSNLASLRILSLSSNELTSI-PLTFWNLKDILQLNFSSNFLTG-PLPLEIGNLKVLIGIDFSMNNF 317 (646)
Q Consensus 241 L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~l-p~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~ls~N~l 317 (646)
+++|++.+..+ ..|..+++|++|++++|.++.+ |..+..+++|+.|++++|.+++ ..|..+..+++|+.|++++|.+
T Consensus 108 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 187 (306)
T 2z66_A 108 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 187 (306)
T ss_dssp CTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred CCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCc
Confidence 87777776554 5677777788888887777754 3456677777888888887765 5677788888888888888888
Q ss_pred cccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCC-CCCceeCcCCcceeeccCC
Q 046544 318 SSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLS-YLEDLNLSFNKLEGEIPRG 396 (646)
Q Consensus 318 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~ 396 (646)
++..|..|..+++|++|++++|++++..+..|..+++|+.|+|++|++++..|..+..++ +|++|+|++|++++.++..
T Consensus 188 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~ 267 (306)
T 2z66_A 188 EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQ 267 (306)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGH
T ss_pred CCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChH
Confidence 888888888888888888888888877777888888889999998888888888888884 8888999999888865532
Q ss_pred C---CCCCCccccccCCccccCCC
Q 046544 397 G---SFGNFAAESFEGNELLCGSP 417 (646)
Q Consensus 397 ~---~~~~~~~~~~~~N~~~c~~~ 417 (646)
. .+...+.+....+...|..|
T Consensus 268 ~~~~~l~~~~~~~~~~~~~~C~~p 291 (306)
T 2z66_A 268 SFLQWIKDQRQLLVEVERMECATP 291 (306)
T ss_dssp HHHHHHHHTGGGBSCGGGCBEEES
T ss_pred HHHHHHHhhhhhhccccccccCCc
Confidence 1 12233344455666666544
No 60
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.98 E-value=8e-32 Score=274.92 Aligned_cols=212 Identities=22% Similarity=0.289 Sum_probs=132.7
Q ss_pred cCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCc-hhhcCCCCCcEEEecCCcccccCCccccCCCCCce
Q 046544 184 NLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIP-DSICRLTELYELELGGNKLFGSIPACFSNLASLRI 262 (646)
Q Consensus 184 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 262 (646)
.+++|++|++++|.+.+ .|..+..+++|++|++++|++++..+ ..+..+++|++|++++|++.+..+..|.++++|++
T Consensus 76 ~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 154 (306)
T 2z66_A 76 GTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 154 (306)
T ss_dssp SCSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCE
T ss_pred cccccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCE
Confidence 33444444444444442 22334444445555555554443332 34455555555555555555555555555555555
Q ss_pred eecCCCcccc--cccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCcc
Q 046544 263 LSLSSNELTS--IPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNR 340 (646)
Q Consensus 263 L~L~~N~l~~--lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 340 (646)
|++++|.++. +|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++..+..|..+++|++|++++|+
T Consensus 155 L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 234 (306)
T 2z66_A 155 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 234 (306)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSC
T ss_pred EECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCC
Confidence 5555555543 45555555556666666666665556667777788888888888887777778888888899999888
Q ss_pred CCCcccccccCCC-CCCEEEccCCcCcccCC--ccccCCCCCCceeCcCCcceeeccCC
Q 046544 341 LEGSIPDSFGDLI-SLKFLNLSNNNLSGAIP--TSLEKLSYLEDLNLSFNKLEGEIPRG 396 (646)
Q Consensus 341 l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~ 396 (646)
+++..|..+..++ +|+.|+|++|.+++.-+ .....+...+.+.+..+.+.|..|..
T Consensus 235 l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~ 293 (306)
T 2z66_A 235 IMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSD 293 (306)
T ss_dssp CCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGG
T ss_pred CcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchh
Confidence 8888888888884 89999999998875322 12233445666777888888887765
No 61
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=2e-31 Score=287.24 Aligned_cols=251 Identities=23% Similarity=0.256 Sum_probs=208.2
Q ss_pred CCCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEE
Q 046544 137 SLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLG 216 (646)
Q Consensus 137 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 216 (646)
....++.+++.++.++.. ++.+++.|+|++|++++..|..|.++++|+.|+|++|+++++.+..|.++++|++|+
T Consensus 55 ~~~~v~c~~~~l~~iP~~-----~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 129 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQG-----IPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLE 129 (452)
T ss_dssp SSCEEECCSSCCSSCCSC-----CCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCcEEEECCCCcCccCCC-----CCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEE
Confidence 457889999998887642 346789999999999988888899999999999999999888888899999999999
Q ss_pred eecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCC-Cccccccc-ccccccccccccCCCCccc
Q 046544 217 LDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSS-NELTSIPL-TFWNLKDILQLNFSSNFLT 294 (646)
Q Consensus 217 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~lp~-~~~~l~~L~~L~l~~N~l~ 294 (646)
|++|+|++..+..|..+++|++|+|++|++..+.+..|.++++|+.|++++ |.+..+|. .|.++++|+.|++++|.++
T Consensus 130 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 209 (452)
T 3zyi_A 130 LFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK 209 (452)
T ss_dssp CCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS
T ss_pred CCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc
Confidence 999999887777888899999999999999888888888899999999988 56777765 4777888888888888887
Q ss_pred CCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCcccc
Q 046544 295 GPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLE 374 (646)
Q Consensus 295 ~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 374 (646)
+. | .+..+++|+.|++++|.++++.|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|.
T Consensus 210 ~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 287 (452)
T 3zyi_A 210 DM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFT 287 (452)
T ss_dssp SC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSST
T ss_pred cc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhc
Confidence 54 3 477788888888888888888788888888888888888888877778888888888888888888877777778
Q ss_pred CCCCCCceeCcCCcceeecc
Q 046544 375 KLSYLEDLNLSFNKLEGEIP 394 (646)
Q Consensus 375 ~l~~L~~L~L~~N~l~~~~p 394 (646)
.+++|+.|+|++|++.|.+.
T Consensus 288 ~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 288 PLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp TCTTCCEEECCSSCEECSTT
T ss_pred cccCCCEEEccCCCcCCCCC
Confidence 88888888888888877654
No 62
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.97 E-value=2.5e-32 Score=277.49 Aligned_cols=143 Identities=27% Similarity=0.357 Sum_probs=129.7
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEec
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYK 570 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 570 (646)
+.|+..++||+|+||+||+|+++ +|+.||||+++.+.. ..+|+.+++.++|||||++++++.+++..|+|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 46778899999999999999965 699999999986532 246999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCC-cEEEEeecCccccc
Q 046544 571 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNL-VAYLSDFGIAKLLI 643 (646)
Q Consensus 571 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~-~~ki~DfGla~~~~ 643 (646)
+||+|.++++..+ .+++.++..++.||+.||+||| +++||||||||+|||++.++ .+||+|||+|+.+.
T Consensus 133 ~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~ 202 (336)
T 4g3f_A 133 EGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202 (336)
T ss_dssp TTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred CCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEcc
Confidence 9999999998754 6899999999999999999999 89999999999999999887 69999999999764
No 63
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=2.2e-31 Score=285.90 Aligned_cols=251 Identities=23% Similarity=0.256 Sum_probs=204.8
Q ss_pred CCCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEE
Q 046544 137 SLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLG 216 (646)
Q Consensus 137 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 216 (646)
....++.+++.++.++.. ++..++.|+|++|++++..+..|.++++|++|+|++|++.++.+..|.++++|++|+
T Consensus 44 ~~~~v~c~~~~l~~iP~~-----~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~ 118 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDG-----ISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLE 118 (440)
T ss_dssp TSCEEECCSCCCSSCCSC-----CCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEE
T ss_pred CCCEEEeCCCCcCcCCCC-----CCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEE
Confidence 467889999998887653 235788899999998888888888888899999999888888888888888889999
Q ss_pred eecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCC-Cccccccc-ccccccccccccCCCCccc
Q 046544 217 LDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSS-NELTSIPL-TFWNLKDILQLNFSSNFLT 294 (646)
Q Consensus 217 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~lp~-~~~~l~~L~~L~l~~N~l~ 294 (646)
|++|+|++..+..|..+++|++|+|++|+|....+..|.++++|+.|++++ |.+..+|. .|.++++|+.|++++|.++
T Consensus 119 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 198 (440)
T 3zyj_A 119 LFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR 198 (440)
T ss_dssp CCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS
T ss_pred CCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc
Confidence 988888877777888888888888888888888778888888888888888 55667765 5777888888888888887
Q ss_pred CCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCcccc
Q 046544 295 GPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLE 374 (646)
Q Consensus 295 ~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 374 (646)
. +| .+..+++|+.|++++|.++++.|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..|.
T Consensus 199 ~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 276 (440)
T 3zyj_A 199 E-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT 276 (440)
T ss_dssp S-CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTS
T ss_pred c-cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhc
Confidence 4 33 477788888888888888887788888888888888888888877777888888888888888888877777777
Q ss_pred CCCCCCceeCcCCcceeecc
Q 046544 375 KLSYLEDLNLSFNKLEGEIP 394 (646)
Q Consensus 375 ~l~~L~~L~L~~N~l~~~~p 394 (646)
.+++|+.|+|++|++.|.+.
T Consensus 277 ~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 277 PLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp SCTTCCEEECCSSCEECSST
T ss_pred cccCCCEEEcCCCCccCCCC
Confidence 88888888888888877654
No 64
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=3.3e-32 Score=283.65 Aligned_cols=255 Identities=20% Similarity=0.178 Sum_probs=218.8
Q ss_pred cCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEec
Q 046544 163 SLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELG 242 (646)
Q Consensus 163 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 242 (646)
+|++|++++|++++..+..+.++++|++|++++|++++..|..|.++++|++|++++|++++..+..|.++++|++|+++
T Consensus 53 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 132 (353)
T 2z80_A 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLL 132 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECT
T ss_pred cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECC
Confidence 45666666666666666788999999999999999999889999999999999999999997777779999999999999
Q ss_pred CCcccccCC-ccccCCCCCceeecCCC-cccccc-cccccccccccccCCCCcccCCCCCccCccccceEEEcccccccc
Q 046544 243 GNKLFGSIP-ACFSNLASLRILSLSSN-ELTSIP-LTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSS 319 (646)
Q Consensus 243 ~N~i~~~~~-~~~~~l~~L~~L~L~~N-~l~~lp-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~ 319 (646)
+|++++..+ ..|.++++|++|++++| .++.++ ..+.++++|+.|++++|.+++..|..+..+++|+.|++++|.++.
T Consensus 133 ~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 212 (353)
T 2z80_A 133 GNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHIL 212 (353)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTT
T ss_pred CCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcccc
Confidence 999986655 58999999999999999 588775 578899999999999999998889999999999999999999987
Q ss_pred cCccccCCCCCCCEEEccCccCCCccccccc---CCCCCCEEEccCCcCcc----cCCccccCCCCCCceeCcCCcceee
Q 046544 320 VIPTEIGGLKNLEYLFLGYNRLEGSIPDSFG---DLISLKFLNLSNNNLSG----AIPTSLEKLSYLEDLNLSFNKLEGE 392 (646)
Q Consensus 320 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~ 392 (646)
..+..+..+++|+.|++++|++++..+..+. ....++.++|++|.+++ .+|..+..+++|++|++++|+++..
T Consensus 213 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i 292 (353)
T 2z80_A 213 LLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSV 292 (353)
T ss_dssp HHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCC
T ss_pred chhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCcc
Confidence 6655666789999999999999987665443 46778999999999886 4788899999999999999999964
Q ss_pred ccCC-CCCCCCccccccCCccccCCC
Q 046544 393 IPRG-GSFGNFAAESFEGNELLCGSP 417 (646)
Q Consensus 393 ~p~~-~~~~~~~~~~~~~N~~~c~~~ 417 (646)
++.. ..+++++.+++++|++.|+|+
T Consensus 293 ~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 293 PDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 4433 568899999999999999886
No 65
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=4.8e-31 Score=284.28 Aligned_cols=248 Identities=22% Similarity=0.217 Sum_probs=176.8
Q ss_pred CCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCC
Q 046544 108 NLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTN 187 (646)
Q Consensus 108 ~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~ 187 (646)
....++.+++.++.+|.++ .+++++|+|++|.++++.+.. +.. .++|+.|+|++|++++..|..|.++++
T Consensus 55 ~~~~v~c~~~~l~~iP~~~--------~~~l~~L~L~~n~i~~~~~~~-~~~-l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 124 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQGI--------PSNTRYLNLMENNIQMIQADT-FRH-LHHLEVLQLGRNSIRQIEVGAFNGLAS 124 (452)
T ss_dssp SSCEEECCSSCCSSCCSCC--------CTTCSEEECCSSCCCEECTTT-TTT-CTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred CCcEEEECCCCcCccCCCC--------CCCccEEECcCCcCceECHHH-cCC-CCCCCEEECCCCccCCcChhhccCccc
Confidence 4566777777777766542 156777777777777664432 222 246777777777777777777777777
Q ss_pred CCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecC-CcccccCCccccCCCCCceeecC
Q 046544 188 SITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGG-NKLFGSIPACFSNLASLRILSLS 266 (646)
Q Consensus 188 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~L~ 266 (646)
|++|+|++|++++.++..|.++++|++|+|++|+|+...+..|..+++|++|++++ |.+..+.+..|.++++|++|+|+
T Consensus 125 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~ 204 (452)
T 3zyi_A 125 LNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLG 204 (452)
T ss_dssp CCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECT
T ss_pred CCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECC
Confidence 77777777777776666777777777777777777766666777777777777777 45555555567777777777777
Q ss_pred CCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCccc
Q 046544 267 SNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIP 346 (646)
Q Consensus 267 ~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 346 (646)
+|.++.+| .+..+++|+.|++++|.+++..|..|.++++|+.|++++|.++++.|..|.++++|+.|+|++|++++..+
T Consensus 205 ~n~l~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 283 (452)
T 3zyi_A 205 MCNIKDMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPH 283 (452)
T ss_dssp TSCCSSCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CCcccccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccCh
Confidence 77777776 46667777777777777777777777777777777777777777777777777777777777777776666
Q ss_pred ccccCCCCCCEEEccCCcCc
Q 046544 347 DSFGDLISLKFLNLSNNNLS 366 (646)
Q Consensus 347 ~~~~~l~~L~~L~Ls~N~l~ 366 (646)
..|..+++|+.|+|++|.+.
T Consensus 284 ~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 284 DLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp TSSTTCTTCCEEECCSSCEE
T ss_pred HHhccccCCCEEEccCCCcC
Confidence 67777777777777777765
No 66
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.97 E-value=9.7e-33 Score=277.21 Aligned_cols=148 Identities=26% Similarity=0.345 Sum_probs=127.5
Q ss_pred CCCCcceeecccccceEEEEEeC----CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKAL 565 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~l 565 (646)
++|+..+.||+|+||+||+|+.. +++.||||+++... ......+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999852 47899999997543 2233468889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 566 VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|||||+||+|.+++...+ .+++.++..++.|++.||+|+| +++|+||||||+|||++.++.+||+|||+|+...
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence 999999999999997754 6899999999999999999999 8899999999999999999999999999998754
No 67
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=7.1e-31 Score=281.93 Aligned_cols=249 Identities=21% Similarity=0.226 Sum_probs=205.2
Q ss_pred CCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCC
Q 046544 107 RNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLT 186 (646)
Q Consensus 107 ~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~ 186 (646)
.....++.+++.++.+|.++ .++++.|+|++|+++.+.+.. +.. .++|++|+|++|.+++..+..|.+++
T Consensus 43 ~~~~~v~c~~~~l~~iP~~~--------~~~l~~L~L~~n~i~~~~~~~-~~~-l~~L~~L~Ls~n~i~~i~~~~~~~l~ 112 (440)
T 3zyj_A 43 NQFSKVICVRKNLREVPDGI--------STNTRLLNLHENQIQIIKVNS-FKH-LRHLEILQLSRNHIRTIEIGAFNGLA 112 (440)
T ss_dssp TTSCEEECCSCCCSSCCSCC--------CTTCSEEECCSCCCCEECTTT-TSS-CSSCCEEECCSSCCCEECGGGGTTCS
T ss_pred CCCCEEEeCCCCcCcCCCCC--------CCCCcEEEccCCcCCeeCHHH-hhC-CCCCCEEECCCCcCCccChhhccCCc
Confidence 34678888888888877653 267888888888888775433 333 35788888888888888888888888
Q ss_pred CCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecC-CcccccCCccccCCCCCceeec
Q 046544 187 NSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGG-NKLFGSIPACFSNLASLRILSL 265 (646)
Q Consensus 187 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~L 265 (646)
+|++|+|++|+++++.+..|..+++|++|+|++|+|+...+..|..+++|++|+|++ |.+..+.+..|.++++|++|++
T Consensus 113 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L 192 (440)
T 3zyj_A 113 NLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 192 (440)
T ss_dssp SCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEEC
T ss_pred cCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecC
Confidence 888888888888877777888888888888888888877777888888888888888 5566566667888888888888
Q ss_pred CCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcc
Q 046544 266 SSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSI 345 (646)
Q Consensus 266 ~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 345 (646)
++|.++.+| .+..+++|+.|++++|.+++..|..|.++++|+.|++++|.++++.+..|.++++|++|+|++|++++..
T Consensus 193 ~~n~l~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 271 (440)
T 3zyj_A 193 AMCNLREIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLP 271 (440)
T ss_dssp TTSCCSSCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCC
T ss_pred CCCcCcccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccC
Confidence 888888887 4777888888888888888888888888888888888888888888888888888888888888888877
Q ss_pred cccccCCCCCCEEEccCCcCc
Q 046544 346 PDSFGDLISLKFLNLSNNNLS 366 (646)
Q Consensus 346 p~~~~~l~~L~~L~Ls~N~l~ 366 (646)
+..|..+++|+.|+|++|.+.
T Consensus 272 ~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 272 HDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp TTTTSSCTTCCEEECCSSCEE
T ss_pred hhHhccccCCCEEEcCCCCcc
Confidence 788888888888888888876
No 68
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.97 E-value=1e-31 Score=268.39 Aligned_cols=145 Identities=28% Similarity=0.396 Sum_probs=127.3
Q ss_pred CcceeecccccceEEEEEeC-CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEec----CCeeEEEE
Q 046544 495 SENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSN----EEFKALVL 567 (646)
Q Consensus 495 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~----~~~~~lv~ 567 (646)
...++||+|+||+||+|++. +++.||+|++.... ....+.|.+|++++++++|||||++++++.+ ++..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 55678999999999999865 68999999997543 3345679999999999999999999999865 34589999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCEEEc-CCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP--VIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--iiHrdlk~~Nil~~-~~~~~ki~DfGla~~~~ 643 (646)
|||+||+|.+++...+ .+++..+..++.||+.||+||| +++ ||||||||+|||++ .++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999999997654 6899999999999999999999 666 99999999999997 47999999999998653
No 69
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.97 E-value=9.4e-32 Score=271.21 Aligned_cols=149 Identities=23% Similarity=0.417 Sum_probs=125.7
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC-chHHHHHHHHHHHHhCCCCCceeEEEEEecCC--------
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKVISSCSNEE-------- 561 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~-------- 561 (646)
++|+..+.||+|+||+||+|+.+ +|+.||||+++.... ...+.+.+|++++++++|||||++++++...+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45888999999999999999965 799999999976543 34567899999999999999999999987543
Q ss_pred ----eeEEEEEecCCCCHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEe
Q 046544 562 ----FKALVLEYKPHGSLEKYLYSSNC--ILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSD 635 (646)
Q Consensus 562 ----~~~lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~D 635 (646)
..|+|||||+||+|.+++..... ..++..+..++.||++||+||| +++||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 47999999999999999976542 3456668899999999999999 88999999999999999999999999
Q ss_pred ecCccccc
Q 046544 636 FGIAKLLI 643 (646)
Q Consensus 636 fGla~~~~ 643 (646)
||+|+.+.
T Consensus 162 FGla~~~~ 169 (299)
T 4g31_A 162 FGLVTAMD 169 (299)
T ss_dssp CCCC----
T ss_pred CccceecC
Confidence 99998764
No 70
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=2.9e-31 Score=267.90 Aligned_cols=251 Identities=24% Similarity=0.232 Sum_probs=141.7
Q ss_pred CEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEee
Q 046544 139 TFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLD 218 (646)
Q Consensus 139 ~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 218 (646)
++++.+++.++.++.. .++++++|++++|.+++..+..|..+++|++|++++|++++..|..|.++++|++|+++
T Consensus 14 ~~~~c~~~~l~~ip~~-----~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 88 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVG-----IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLS 88 (285)
T ss_dssp CEEECCSSCCSSCCTT-----CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred eEEEcCcCCcccCCcC-----CCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCC
Confidence 5666776666655321 12345555555555555555555555555555555555555555555555555555555
Q ss_pred ccc-ccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCC
Q 046544 219 DNK-LEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPL 297 (646)
Q Consensus 219 ~N~-l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~ 297 (646)
+|. +....|..|..+++|++|++++|++++..+..|.++++|++|++++|.++. ..
T Consensus 89 ~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-----------------------~~ 145 (285)
T 1ozn_A 89 DNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-----------------------LP 145 (285)
T ss_dssp SCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC-----------------------CC
T ss_pred CCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccc-----------------------cC
Confidence 554 444444555555555555555555554444445555555555555554444 44
Q ss_pred CCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCC
Q 046544 298 PLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLS 377 (646)
Q Consensus 298 ~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 377 (646)
+..|..+++|+.|++++|.+++..+..|..+++|++|++++|++++..|..|..+++|+.|++++|++++..+..+..++
T Consensus 146 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 225 (285)
T 1ozn_A 146 DDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLR 225 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCT
T ss_pred HhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCc
Confidence 44455566666666666666655555566666666666666666666666666666666666666666655555566666
Q ss_pred CCCceeCcCCcceeeccCCCCCCCCccccccCCccccCCC
Q 046544 378 YLEDLNLSFNKLEGEIPRGGSFGNFAAESFEGNELLCGSP 417 (646)
Q Consensus 378 ~L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~ 417 (646)
+|++|++++|++.+.++....+..++......+.+.|..|
T Consensus 226 ~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p 265 (285)
T 1ozn_A 226 ALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLP 265 (285)
T ss_dssp TCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEES
T ss_pred ccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCc
Confidence 6666666666666655543333334444455555555433
No 71
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.97 E-value=3.7e-31 Score=268.14 Aligned_cols=148 Identities=29% Similarity=0.414 Sum_probs=124.9
Q ss_pred CCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCC----eeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEE----FKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~----~~~lv~ 567 (646)
++|...+.||+|+||+||+|++ +|+.||||+++..... ...+.+|+..+.+++|||||++++++..++ ..|+||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 3567789999999999999998 5899999998754321 122334566667889999999999998653 579999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG-----CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-----~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
|||++|+|.++++.. .+++..+.+++.|+++||+|+|+. +.++||||||||+|||++.++.+||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999999875 488999999999999999999943 2349999999999999999999999999999875
Q ss_pred c
Q 046544 643 I 643 (646)
Q Consensus 643 ~ 643 (646)
.
T Consensus 159 ~ 159 (303)
T 3hmm_A 159 D 159 (303)
T ss_dssp E
T ss_pred c
Confidence 4
No 72
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=1.3e-30 Score=263.03 Aligned_cols=254 Identities=21% Similarity=0.224 Sum_probs=204.3
Q ss_pred CCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCC
Q 046544 109 LEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNS 188 (646)
Q Consensus 109 L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L 188 (646)
-++++++++.++.+|.++ .++|++|++++|.++++++.. +.. .++|++|++++|.+++..|..+..+++|
T Consensus 13 ~~~~~c~~~~l~~ip~~~--------~~~l~~L~l~~n~i~~~~~~~-~~~-~~~L~~L~l~~n~l~~~~~~~~~~l~~L 82 (285)
T 1ozn_A 13 KVTTSCPQQGLQAVPVGI--------PAASQRIFLHGNRISHVPAAS-FRA-CRNLTILWLHSNVLARIDAAAFTGLALL 82 (285)
T ss_dssp SCEEECCSSCCSSCCTTC--------CTTCSEEECTTSCCCEECTTT-TTT-CTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred CeEEEcCcCCcccCCcCC--------CCCceEEEeeCCcCCccCHHH-ccc-CCCCCEEECCCCccceeCHhhcCCccCC
Confidence 478999999999986542 468999999999999876543 333 3589999999999999999999999999
Q ss_pred CEEEccCCc-cccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCC
Q 046544 189 ITIDLGGNK-LNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSS 267 (646)
Q Consensus 189 ~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 267 (646)
++|++++|+ +....|..|..+++|++|++++|.+++..|..|..+++|++|++++|++++..+..|..+++|++|++++
T Consensus 83 ~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 162 (285)
T 1ozn_A 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHG 162 (285)
T ss_dssp CEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCC
Confidence 999999997 8888899999999999999999999998899999999999999999999988888899999999999999
Q ss_pred CcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccc
Q 046544 268 NELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPD 347 (646)
Q Consensus 268 N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 347 (646)
|.++.+|.. .|..+++|+.|++++|.+++..|..|..+++|+.|++++|++++..+.
T Consensus 163 n~l~~~~~~-----------------------~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 219 (285)
T 1ozn_A 163 NRISSVPER-----------------------AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTE 219 (285)
T ss_dssp SCCCEECTT-----------------------TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHH
T ss_pred CcccccCHH-----------------------HhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHH
Confidence 998877642 234455566666666666666677777777778888888887776667
Q ss_pred cccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccCC
Q 046544 348 SFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRG 396 (646)
Q Consensus 348 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 396 (646)
.|..+++|+.|++++|.+....+.. .-...++.+..+.|.+.|..|..
T Consensus 220 ~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 220 ALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp HHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGG
T ss_pred HcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchH
Confidence 7777888888888888776433221 11233455667778888877765
No 73
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=2.1e-30 Score=266.50 Aligned_cols=226 Identities=20% Similarity=0.254 Sum_probs=194.4
Q ss_pred ccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEe
Q 046544 162 HSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELEL 241 (646)
Q Consensus 162 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 241 (646)
..++.|+|++|.++ .+|..+..+++|++|+|++|.+. .+|..+.++++|++|+|++|+++ .+|..|..+++|++|+|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 45677777777776 45666777888888888888888 67778888888888888888888 66888888888888888
Q ss_pred cCCcccccCCccccC---------CCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEc
Q 046544 242 GGNKLFGSIPACFSN---------LASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDF 312 (646)
Q Consensus 242 ~~N~i~~~~~~~~~~---------l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 312 (646)
++|.+.+..|..+.. +++|++|++++|.++.+|..+..+++|+.|++++|.+++ +|..+..+++|+.|++
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~L 236 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDL 236 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEEC
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEEC
Confidence 888777777776554 899999999999999999888899999999999999985 5567889999999999
Q ss_pred ccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCccee
Q 046544 313 SMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEG 391 (646)
Q Consensus 313 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 391 (646)
++|++.+..|..|+++++|++|+|++|++.+.+|..+..+++|+.|+|++|++.+.+|..+..+++|+.+++..|.+..
T Consensus 237 s~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 237 RGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp TTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC
T ss_pred cCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHH
Confidence 9999999999999999999999999999998999999999999999999999999999999999999999998887764
No 74
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.97 E-value=2e-29 Score=278.95 Aligned_cols=268 Identities=25% Similarity=0.240 Sum_probs=152.1
Q ss_pred CCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEcccCccccccCccccCcCCCCEEEc
Q 046544 35 MLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNL 114 (646)
Q Consensus 35 ~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 114 (646)
++++|++++|.|+..+..+. ++|++|+|++|+|+. +|. .+++|++|+|++|+|+++++ .+++|++|+|
T Consensus 41 ~l~~L~ls~n~L~~lp~~l~----~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~L 108 (622)
T 3g06_A 41 GNAVLNVGESGLTTLPDCLP----AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTSLPV----LPPGLLELSI 108 (622)
T ss_dssp CCCEEECCSSCCSCCCSCCC----TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSCCCC----CCTTCCEEEE
T ss_pred CCcEEEecCCCcCccChhhC----CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCcCCC----CCCCCCEEEC
Confidence 46666666666654332222 466666666666663 333 34566666666666664322 4556666666
Q ss_pred cCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEcc
Q 046544 115 RDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLG 194 (646)
Q Consensus 115 ~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 194 (646)
++|+|+.++. .+++|+.|++++|+++.++ .. +++|++|+++
T Consensus 109 s~N~l~~l~~---------~l~~L~~L~L~~N~l~~lp---------------------------~~---l~~L~~L~Ls 149 (622)
T 3g06_A 109 FSNPLTHLPA---------LPSGLCKLWIFGNQLTSLP---------------------------VL---PPGLQELSVS 149 (622)
T ss_dssp CSCCCCCCCC---------CCTTCCEEECCSSCCSCCC---------------------------CC---CTTCCEEECC
T ss_pred cCCcCCCCCC---------CCCCcCEEECCCCCCCcCC---------------------------CC---CCCCCEEECc
Confidence 6666655432 2345555555555554432 11 2556666666
Q ss_pred CCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccc
Q 046544 195 GNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIP 274 (646)
Q Consensus 195 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp 274 (646)
+|+++++ |. .+++|+.|++++|.|++ +| ..+++|+.|++++|+|+++ |.. +++|+.|++++|.++.+|
T Consensus 150 ~N~l~~l-~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l-~~~---~~~L~~L~L~~N~l~~l~ 217 (622)
T 3g06_A 150 DNQLASL-PA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASL-PTL---PSELYKLWAYNNRLTSLP 217 (622)
T ss_dssp SSCCSCC-CC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSSCC
T ss_pred CCcCCCc-CC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCC-CCc---cchhhEEECcCCcccccC
Confidence 6666543 22 23456666666666664 33 3345666666666666542 222 356666777777666666
Q ss_pred cccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCC
Q 046544 275 LTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLIS 354 (646)
Q Consensus 275 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 354 (646)
.. +++|+.|++++|.+++ +| ..+++|+.|++++|.++++ |. .+++|+.|+|++|+|+ .+|..|..+++
T Consensus 218 ~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~l-p~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~ 285 (622)
T 3g06_A 218 AL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSL-PM---LPSGLLSLSVYRNQLT-RLPESLIHLSS 285 (622)
T ss_dssp CC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCC-SCCGGGGGSCT
T ss_pred CC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcC-Cc---ccccCcEEeCCCCCCC-cCCHHHhhccc
Confidence 42 2556666666666654 33 3345666666666666643 22 4566777777777776 45666667777
Q ss_pred CCEEEccCCcCcccCCccccCCC
Q 046544 355 LKFLNLSNNNLSGAIPTSLEKLS 377 (646)
Q Consensus 355 L~~L~Ls~N~l~~~~p~~~~~l~ 377 (646)
|+.|+|++|.+++..|..+..++
T Consensus 286 L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 286 ETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp TCEEECCSCCCCHHHHHHHHHHH
T ss_pred cCEEEecCCCCCCcCHHHHHhcc
Confidence 77777777777666666555443
No 75
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.97 E-value=2.7e-29 Score=277.87 Aligned_cols=269 Identities=22% Similarity=0.248 Sum_probs=182.0
Q ss_pred CCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEE
Q 046544 10 QNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKLSILE 89 (646)
Q Consensus 10 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 89 (646)
.++++|++++|+|+ .+|..+. ++|++|+|++|.|+..+. .+++|++|+|++|+|++ +|. .+++|++|+
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~-----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 107 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA-----LPPELRTLEVSGNQLTS-LPV---LPPGLLELS 107 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC-----CCTTCCEEEECSCCCSC-CCC---CCTTCCEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC-----cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEE
Confidence 46899999999999 5566555 899999999999986433 37899999999999995 554 679999999
Q ss_pred cccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEe
Q 046544 90 LSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYM 169 (646)
Q Consensus 90 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L 169 (646)
|++|.|+++.+ .+++|++|++++|+|+.++.. +++|++|++++|++++++. ...+|+.|++
T Consensus 108 Ls~N~l~~l~~----~l~~L~~L~L~~N~l~~lp~~---------l~~L~~L~Ls~N~l~~l~~------~~~~L~~L~L 168 (622)
T 3g06_A 108 IFSNPLTHLPA----LPSGLCKLWIFGNQLTSLPVL---------PPGLQELSVSDNQLASLPA------LPSELCKLWA 168 (622)
T ss_dssp ECSCCCCCCCC----CCTTCCEEECCSSCCSCCCCC---------CTTCCEEECCSSCCSCCCC------CCTTCCEEEC
T ss_pred CcCCcCCCCCC----CCCCcCEEECCCCCCCcCCCC---------CCCCCEEECcCCcCCCcCC------ccCCCCEEEC
Confidence 99999997644 678999999999999987642 4889999999999987642 1245666666
Q ss_pred ecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCccccc
Q 046544 170 SNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGS 249 (646)
Q Consensus 170 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 249 (646)
++|.+++. | ..+++|+.|++++|+++++++ .+++|+.|++++|.++. +|. .+
T Consensus 169 ~~N~l~~l-~---~~~~~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~N~l~~-l~~---~~---------------- 220 (622)
T 3g06_A 169 YNNQLTSL-P---MLPSGLQELSVSDNQLASLPT----LPSELYKLWAYNNRLTS-LPA---LP---------------- 220 (622)
T ss_dssp CSSCCSCC-C---CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSS-CCC---CC----------------
T ss_pred CCCCCCCC-c---ccCCCCcEEECCCCCCCCCCC----ccchhhEEECcCCcccc-cCC---CC----------------
Confidence 66666642 2 334555555666555553221 12445555555555542 221 12
Q ss_pred CCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCC
Q 046544 250 IPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLK 329 (646)
Q Consensus 250 ~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~ 329 (646)
++|+.|++++|.|+.+| ..+++|+.|++++|.+++ +|. .+++|+.|++++|.++ .+|..|..++
T Consensus 221 --------~~L~~L~Ls~N~L~~lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~ 284 (622)
T 3g06_A 221 --------SGLKELIVSGNRLTSLP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLS 284 (622)
T ss_dssp --------TTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSC
T ss_pred --------CCCCEEEccCCccCcCC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhcc
Confidence 44455555555555444 223445555555555542 222 3456667777777777 3466677777
Q ss_pred CCCEEEccCccCCCcccccccCCC
Q 046544 330 NLEYLFLGYNRLEGSIPDSFGDLI 353 (646)
Q Consensus 330 ~L~~L~Ls~N~l~~~~p~~~~~l~ 353 (646)
+|+.|+|++|++++..|..+..++
T Consensus 285 ~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 285 SETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp TTCEEECCSCCCCHHHHHHHHHHH
T ss_pred ccCEEEecCCCCCCcCHHHHHhcc
Confidence 777777777777777777666554
No 76
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.97 E-value=7.3e-31 Score=270.10 Aligned_cols=158 Identities=25% Similarity=0.393 Sum_probs=135.8
Q ss_pred HHHHHHHhCCCCcceeecccccceEEEEEeC------CCcEEEEEEEeccCC-chHHHHHHHHHHHHhCCC-CCceeEEE
Q 046544 484 YLELCRATNGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRH-RNLIKVIS 555 (646)
Q Consensus 484 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H-~niv~~~~ 555 (646)
..+++...++|+..+.||+|+||+||+|++. +++.||||++..... ...++|.+|++++++++| ||||++++
T Consensus 56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 3455555678999999999999999999853 246899999976543 345679999999999965 89999999
Q ss_pred EEecC-CeeEEEEEecCCCCHHHHHhhC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCC
Q 046544 556 SCSNE-EFKALVLEYKPHGSLEKYLYSS---------------NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLK 619 (646)
Q Consensus 556 ~~~~~-~~~~lv~e~~~~g~L~~~l~~~---------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk 619 (646)
+|..+ +..++|||||++|+|.++++.. ...+++.++..++.|||+||+||| +++|||||||
T Consensus 136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK 212 (353)
T 4ase_A 136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLA 212 (353)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccC
Confidence 99765 5689999999999999999753 235789999999999999999999 8899999999
Q ss_pred CCCEEEcCCCcEEEEeecCcccccC
Q 046544 620 PDNVLLDDNLVAYLSDFGIAKLLIG 644 (646)
Q Consensus 620 ~~Nil~~~~~~~ki~DfGla~~~~~ 644 (646)
|+|||+++++.+||+|||+|+.+..
T Consensus 213 ~~NILl~~~~~vKi~DFGlar~~~~ 237 (353)
T 4ase_A 213 ARNILLSEKNVVKICDFGLARDIYK 237 (353)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTT
T ss_pred ccceeeCCCCCEEECcchhhhhccc
Confidence 9999999999999999999997643
No 77
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.97 E-value=3.6e-32 Score=278.71 Aligned_cols=266 Identities=19% Similarity=0.145 Sum_probs=142.1
Q ss_pred EEEccCCcccccCCccccCCCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEE
Q 046544 63 ALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIH 142 (646)
Q Consensus 63 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~ 142 (646)
.++++.+.+...++..+..+++|++|+|++|.|+++.|..|.++++|++|+|++|+++..+ .+.++++|++|+
T Consensus 14 i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-------~~~~l~~L~~L~ 86 (317)
T 3o53_A 14 IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETL-------DLESLSTLRTLD 86 (317)
T ss_dssp EESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEE-------EETTCTTCCEEE
T ss_pred EeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcch-------hhhhcCCCCEEE
Confidence 3444445554444444444555555555555555555555555555666666555554421 145555555555
Q ss_pred CCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccc
Q 046544 143 LSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKL 222 (646)
Q Consensus 143 Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 222 (646)
+++|++++++. .++|++|++++|++++..+.. +++|++|++++|++
T Consensus 87 Ls~n~l~~l~~-------------------------------~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l 132 (317)
T 3o53_A 87 LNNNYVQELLV-------------------------------GPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKI 132 (317)
T ss_dssp CCSSEEEEEEE-------------------------------CTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCC
T ss_pred CcCCccccccC-------------------------------CCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCC
Confidence 55555443311 123333333333333332222 23344444444444
Q ss_pred cCcCchhhcCCCCCcEEEecCCcccccCCccc-cCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCcc
Q 046544 223 EGSIPDSICRLTELYELELGGNKLFGSIPACF-SNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEI 301 (646)
Q Consensus 223 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~-~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~ 301 (646)
++..+..|..+++|++|+|++|++++..+..+ ..+++|++|++++|.++.+|... .+++|+.|++++|.+++. |..+
T Consensus 133 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~l~~L~~L~Ls~N~l~~l-~~~~ 210 (317)
T 3o53_A 133 TMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQV-VFAKLKTLDLSSNKLAFM-GPEF 210 (317)
T ss_dssp CSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCC-CCTTCCEEECCSSCCCEE-CGGG
T ss_pred CCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccccccc-ccccCCEEECCCCcCCcc-hhhh
Confidence 44444444444444444444444444433333 23445555555555554443221 244555555555555532 2335
Q ss_pred CccccceEEEcccccccccCccccCCCCCCCEEEccCccCC-CcccccccCCCCCCEEEccC-CcCcccCCcc
Q 046544 302 GNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLE-GSIPDSFGDLISLKFLNLSN-NNLSGAIPTS 372 (646)
Q Consensus 302 ~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~ 372 (646)
..+++|+.|++++|.+++ +|..+..+++|+.|++++|++. +.+|..+..+++|+.|++++ +.+++..|..
T Consensus 211 ~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 211 QSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp GGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred cccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhc
Confidence 566666777777777764 4666778888888888888887 67778888888888888884 4566555543
No 78
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=1.2e-29 Score=261.00 Aligned_cols=185 Identities=19% Similarity=0.251 Sum_probs=142.3
Q ss_pred cccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhh---------cCCCCCcEEEecCCcccccC
Q 046544 180 EEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSI---------CRLTELYELELGGNKLFGSI 250 (646)
Q Consensus 180 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~---------~~l~~L~~L~L~~N~i~~~~ 250 (646)
..+..+++|++|+|++|+++ .+|..+.++++|++|++++|.+.+.+|..+ .++++|++|+|++|+++ .+
T Consensus 121 ~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~l 198 (328)
T 4fcg_A 121 DTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SL 198 (328)
T ss_dssp SCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CC
T ss_pred HHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cc
Confidence 33444444444444444444 334444455555555555544444444443 44888888888888887 66
Q ss_pred CccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCC
Q 046544 251 PACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKN 330 (646)
Q Consensus 251 ~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~ 330 (646)
|..+.++++|++|++++|.++.+|..+..+++|+.|++++|.+.+.+|..++.+++|+.|++++|++.+..|..++.+++
T Consensus 199 p~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~ 278 (328)
T 4fcg_A 199 PASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQ 278 (328)
T ss_dssp CGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTT
T ss_pred hHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCC
Confidence 77788888888888888888888888888888888888888888888889999999999999999999999999999999
Q ss_pred CCEEEccCccCCCcccccccCCCCCCEEEccCCcCc
Q 046544 331 LEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLS 366 (646)
Q Consensus 331 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 366 (646)
|++|+|++|++.+.+|+.++.+++|+.+++..|.+.
T Consensus 279 L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 279 LEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 999999999999999999999999999999988775
No 79
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=9.1e-32 Score=275.76 Aligned_cols=236 Identities=21% Similarity=0.206 Sum_probs=120.4
Q ss_pred CCCCCEEEccCCcccccCCccccCCCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCC
Q 046544 58 LPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKS 137 (646)
Q Consensus 58 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~ 137 (646)
+++|++|+|++|++++..|..|..+++|++|+|++|.+++..+ |..+++|++|+|++|+++.++ ..++
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~----------~~~~ 100 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL----------VGPS 100 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE----------ECTT
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc----------CCCC
Confidence 3455555555555555555555555556666666665554433 555566666666666555432 1255
Q ss_pred CCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccc-cCCCCCCeEE
Q 046544 138 LTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITL-SKLQKLQGLG 216 (646)
Q Consensus 138 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~ 216 (646)
|++|++++|+++++.... .++|++|++++|++++..|..+..+++|++|++++|++.+..+..+ ..+++|++|+
T Consensus 101 L~~L~l~~n~l~~~~~~~-----~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 175 (317)
T 3o53_A 101 IETLHAANNNISRVSCSR-----GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (317)
T ss_dssp CCEEECCSSCCSEEEECC-----CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred cCEEECCCCccCCcCccc-----cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEE
Confidence 666666666555442211 1234444444444444444455555555556666655555544444 2455555555
Q ss_pred eecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccccccccccccccccCCCCccc-C
Q 046544 217 LDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLT-G 295 (646)
Q Consensus 217 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~-~ 295 (646)
|++|.+++..+ ...+++|++|+|++|++++..+ .|..+++|+.|++++|.++.+|..+..+++|+.|++++|.+. +
T Consensus 176 L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 176 LQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp CTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHH
T ss_pred CCCCcCccccc--ccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCc
Confidence 55555553311 2235555555555555553332 255555555555555555555554444555555555555544 3
Q ss_pred CCCCccCccccceEEEcc
Q 046544 296 PLPLEIGNLKVLIGIDFS 313 (646)
Q Consensus 296 ~~~~~~~~l~~L~~L~ls 313 (646)
..|..+..++.|+.++++
T Consensus 253 ~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 253 TLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp HHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHhccccceEEECC
Confidence 334444444444444444
No 80
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.96 E-value=1.6e-29 Score=264.79 Aligned_cols=147 Identities=29% Similarity=0.408 Sum_probs=130.3
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC--chHHHHHHHHHHHHhCCCCCceeEEEEEec------CCe
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG--RAFKSFAVECEMMKSIRHRNLIKVISSCSN------EEF 562 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~~~~~~~~------~~~ 562 (646)
++|+..+.||+|+||+||+|++. +|+.||||+++.... ...+.+.+|+++|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999965 799999999975432 334678899999999999999999998764 357
Q ss_pred eEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 563 KALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 563 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
.|+|||||+ |+|.+++...+ .+++..+..+++||+.||+||| +++||||||||+|||++.++.+||+|||+|+.+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 899999996 68999987654 7899999999999999999999 899999999999999999999999999999876
Q ss_pred c
Q 046544 643 I 643 (646)
Q Consensus 643 ~ 643 (646)
.
T Consensus 209 ~ 209 (398)
T 4b99_A 209 C 209 (398)
T ss_dssp -
T ss_pred c
Confidence 3
No 81
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=8.5e-31 Score=267.89 Aligned_cols=202 Identities=19% Similarity=0.226 Sum_probs=135.5
Q ss_pred cCCCCCEEEccCCccccccCccc--cCCCCCCeEEeecccccCcCchhhcCC-----CCCcEEEecCCcccccCCccccC
Q 046544 184 NLTNSITIDLGGNKLNGSIPITL--SKLQKLQGLGLDDNKLEGSIPDSICRL-----TELYELELGGNKLFGSIPACFSN 256 (646)
Q Consensus 184 ~l~~L~~L~L~~N~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~i~~~~~~~~~~ 256 (646)
++++|++|++++|++++..|..+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++.+..+..|++
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 56666666666666666556554 6666666666666666655 5556555 66666777777666666666666
Q ss_pred CCCCceeecCCCcccc---ccccc--ccccccccccCCCCcccCC---CCCccCccccceEEEcccccccccCc-cccCC
Q 046544 257 LASLRILSLSSNELTS---IPLTF--WNLKDILQLNFSSNFLTGP---LPLEIGNLKVLIGIDFSMNNFSSVIP-TEIGG 327 (646)
Q Consensus 257 l~~L~~L~L~~N~l~~---lp~~~--~~l~~L~~L~l~~N~l~~~---~~~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~ 327 (646)
+++|++|++++|++.. +|..+ ..+++|++|++++|.+++. ....+..+++|+.|++++|.+++..| ..+..
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 6667777777666543 23333 5666666666666666521 11233456777777777777777664 45666
Q ss_pred CCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCccee
Q 046544 328 LKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEG 391 (646)
Q Consensus 328 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 391 (646)
+++|++|+|++|+++ .+|..+. ++|++|||++|+|++. |. +..+++|++|++++|++++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 788888888888887 5666555 7788888888888755 55 7788888888888888875
No 82
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=3.8e-30 Score=263.10 Aligned_cols=246 Identities=21% Similarity=0.195 Sum_probs=143.8
Q ss_pred CCCCCEEEccCCcccccCCccccCCCCCcEEEcccCcccc-ccCcccc-------CcCCCCEEEccCCCCCCCCCccccc
Q 046544 58 LPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSG-FIPNTFG-------NLRNLEWLNLRDNYLTSSTPELSFL 129 (646)
Q Consensus 58 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~ 129 (646)
.++|++|++++|.+ .+|..+... |+.|+|++|.+.. ..|..+. ++++|++|+|++|+++...+
T Consensus 42 ~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~----- 112 (312)
T 1wwl_A 42 GRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAP----- 112 (312)
T ss_dssp EEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCC-----
T ss_pred CCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhH-----
Confidence 34455555555555 344433332 5555666666532 2333333 45666666666666653211
Q ss_pred ccC--CCCCCCCEEECCCCCCCCcCCcchhccc----cccCcEEEeecccccccCCcccccCCCCCEEEccCCccccc--
Q 046544 130 SSL--SNCKSLTFIHLSDNPLDGILSKTSIGNL----SHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGS-- 201 (646)
Q Consensus 130 ~~l--~~l~~L~~L~Ls~N~l~~~~~~~~~~~~----~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-- 201 (646)
..+ .++++|++|++++|+++++ + ..+..+ .++|++|+|++|++.+..|..+..+++|++|++++|++.+.
T Consensus 113 ~~~~~~~l~~L~~L~Ls~N~l~~~-~-~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 190 (312)
T 1wwl_A 113 PPLLEATGPDLNILNLRNVSWATR-D-AWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERG 190 (312)
T ss_dssp CCSSSCCSCCCSEEEEESCBCSSS-S-SHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHH
T ss_pred HHHHHhcCCCccEEEccCCCCcch-h-HHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchH
Confidence 112 5556666666666666555 1 222222 14566667777777666677777888888888888876554
Q ss_pred cCccc--cCCCCCCeEEeecccccC---cCchhhcCCCCCcEEEecCCcccccCC-ccccCCCCCceeecCCCccccccc
Q 046544 202 IPITL--SKLQKLQGLGLDDNKLEG---SIPDSICRLTELYELELGGNKLFGSIP-ACFSNLASLRILSLSSNELTSIPL 275 (646)
Q Consensus 202 ~~~~~--~~l~~L~~L~L~~N~l~~---~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~lp~ 275 (646)
.|..+ ..+++|++|+|++|+|++ .....+..+++|++|+|++|++++..| ..+..+++|++|+|++|.|+++|.
T Consensus 191 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip~ 270 (312)
T 1wwl_A 191 LISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPK 270 (312)
T ss_dssp HHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCCS
T ss_pred HHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhhh
Confidence 22233 677778888888887773 222344567777777777777776554 455667777777777777777766
Q ss_pred ccccccccccccCCCCcccCCCCCccCccccceEEEccccccc
Q 046544 276 TFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFS 318 (646)
Q Consensus 276 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~ 318 (646)
.+. ++|+.|++++|++++. |. +..+++|+.|++++|.++
T Consensus 271 ~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 271 GLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp SCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred hcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 554 5555555555555543 33 455555555555555544
No 83
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.96 E-value=6.4e-29 Score=271.13 Aligned_cols=149 Identities=24% Similarity=0.318 Sum_probs=130.5
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHH---HHHHHHHhCCCCCceeEEEEEecCCeeE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFA---VECEMMKSIRHRNLIKVISSCSNEEFKA 564 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~---~e~~~l~~l~H~niv~~~~~~~~~~~~~ 564 (646)
++|+..+.||+|+||+||+|+.+ +|+.||||++.+.. ........ .++++++.++|||||++++++.+++..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 56899999999999999999965 69999999997532 11222233 3466777889999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccccC
Q 046544 565 LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~~ 644 (646)
+|||||+||+|.+++...+ .+++..+..+++||+.||+||| +++||||||||+|||++.+|.+||+|||+|+.+.+
T Consensus 269 lVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 9999999999999998754 6899999999999999999999 89999999999999999999999999999987653
No 84
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=9.2e-32 Score=300.39 Aligned_cols=400 Identities=16% Similarity=0.123 Sum_probs=202.7
Q ss_pred ccCCCCCCEEECCCCcc---cccCCcCcc------------CCCCCCEEECcCCcCcccCCc-cCcCCCC-CCCEEEccC
Q 046544 6 ISNLQNLEELDLRHNKL---VGTVPAAIF------------NMSMLKLLHLQNNSLLGCLSS-IADVRLP-NLEALLLWG 68 (646)
Q Consensus 6 ~~~l~~L~~L~L~~N~l---~~~~~~~~~------------~l~~L~~L~L~~N~l~~~~~~-~~~~~l~-~L~~L~L~~ 68 (646)
+..+++|++|+|+++.- .+..|..+. .+++|++|+|++|.+++.... +.. .++ +|++|+|++
T Consensus 69 ~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~-~~~~~L~~L~L~~ 147 (592)
T 3ogk_B 69 SRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAK-ARADDLETLKLDK 147 (592)
T ss_dssp HHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHH-HHGGGCCEEEEES
T ss_pred HHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHH-hccccCcEEECcC
Confidence 45667778888876542 123333333 567788888887776532211 111 123 377777777
Q ss_pred Cc-ccc-cCCccccCCCCCcEEEcccCcccccc----CccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEE
Q 046544 69 NN-FSG-TIPRFIFNASKLSILELSQNSFSGFI----PNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIH 142 (646)
Q Consensus 69 N~-l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~ 142 (646)
|. ++. ..+.....+++|++|+|++|.+++.. +..+..+++|++|+|++|.++...... +...+.++++|++|+
T Consensus 148 ~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~-l~~~~~~~~~L~~L~ 226 (592)
T 3ogk_B 148 CSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKD-LETIARNCRSLVSVK 226 (592)
T ss_dssp CEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHH-HHHHHHHCTTCCEEE
T ss_pred CCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHH-HHHHHhhCCCCcEEe
Confidence 75 221 12222345677777777777776542 223456677777777777776332111 233345677777777
Q ss_pred CCCCCCCCcCCcchhccccccCcEEEeeccccc---ccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeec
Q 046544 143 LSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVS---GGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDD 219 (646)
Q Consensus 143 Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~---~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 219 (646)
+++|.+.+++ ..+..+ ++|++|+++.+... ...+..+..+++|+.|+++++... ..|..+..+++|++|+|++
T Consensus 227 L~~~~~~~l~--~~~~~~-~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~ 302 (592)
T 3ogk_B 227 VGDFEILELV--GFFKAA-ANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLY 302 (592)
T ss_dssp CSSCBGGGGH--HHHHHC-TTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETT
T ss_pred ccCccHHHHH--HHHhhh-hHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCC
Confidence 7777776542 222222 46677776643322 123344455556666666554322 3444555555666666666
Q ss_pred ccccCcCc-hhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCC-----------Ccccc--ccccccccccccc
Q 046544 220 NKLEGSIP-DSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSS-----------NELTS--IPLTFWNLKDILQ 285 (646)
Q Consensus 220 N~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-----------N~l~~--lp~~~~~l~~L~~ 285 (646)
|.+++... ..+..+++|++|+++++-..+..+..+..+++|+.|++++ |.++. ++..+..+++|++
T Consensus 303 ~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 382 (592)
T 3ogk_B 303 ALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEY 382 (592)
T ss_dssp CCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSE
T ss_pred CcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeE
Confidence 65543222 2245555666666652221222223334455566666652 34442 2222233555555
Q ss_pred ccCCCCcccCCCCCccCc-cccceEEEcc----ccccccc-----CccccCCCCCCCEEEccCc--cCCCccccccc-CC
Q 046544 286 LNFSSNFLTGPLPLEIGN-LKVLIGIDFS----MNNFSSV-----IPTEIGGLKNLEYLFLGYN--RLEGSIPDSFG-DL 352 (646)
Q Consensus 286 L~l~~N~l~~~~~~~~~~-l~~L~~L~ls----~N~l~~~-----~~~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~-~l 352 (646)
|+++.|.+++..+..+.. +++|+.|+++ .|.+++. .+..+.++++|++|++++| .+++..+..+. .+
T Consensus 383 L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~ 462 (592)
T 3ogk_B 383 MAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYS 462 (592)
T ss_dssp EEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSC
T ss_pred EEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhC
Confidence 555555555443333333 5555555554 4444432 2222444555555555432 24433333332 24
Q ss_pred CCCCEEEccCCcCcc-cCCccccCCCCCCceeCcCCcceee-ccCC-CCCCCCccccccCCc
Q 046544 353 ISLKFLNLSNNNLSG-AIPTSLEKLSYLEDLNLSFNKLEGE-IPRG-GSFGNFAAESFEGNE 411 (646)
Q Consensus 353 ~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~-~~~~~~~~~~~~~N~ 411 (646)
++|+.|++++|++++ .++..+..+++|++|++++|++++. ++.. ..+++++.+++++|+
T Consensus 463 ~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 463 PNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp TTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred ccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 555555555555554 2333344555555555555555432 1211 124455555555555
No 85
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.96 E-value=5.2e-29 Score=258.04 Aligned_cols=147 Identities=24% Similarity=0.314 Sum_probs=130.6
Q ss_pred HHHhCCCCcceeecccccceEEEEEeC----CCcEEEEEEEeccCCchHHHHHHHHHHHHhC-CCCCceeEEEEEecCCe
Q 046544 488 CRATNGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQCGRAFKSFAVECEMMKSI-RHRNLIKVISSCSNEEF 562 (646)
Q Consensus 488 ~~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~~ 562 (646)
....++|++.+.||+|+||+||+|+.+ +++.||+|.+.... ...++.+|+++++.+ +|||||++++++.+++.
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 344578999999999999999999753 47889999886543 335678999999998 69999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCC-CcEEEEeecCccc
Q 046544 563 KALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDN-LVAYLSDFGIAKL 641 (646)
Q Consensus 563 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~-~~~ki~DfGla~~ 641 (646)
.|+|||||+||+|.+++. .+++.++..+++|++.||+||| +++|+||||||+|||++.+ +.+||+|||+|+.
T Consensus 95 ~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167 (361)
T ss_dssp EEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence 999999999999999984 4789999999999999999999 8999999999999999876 8999999999986
Q ss_pred cc
Q 046544 642 LI 643 (646)
Q Consensus 642 ~~ 643 (646)
..
T Consensus 168 ~~ 169 (361)
T 4f9c_A 168 TH 169 (361)
T ss_dssp CT
T ss_pred cC
Confidence 53
No 86
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.96 E-value=8.5e-29 Score=272.08 Aligned_cols=150 Identities=21% Similarity=0.318 Sum_probs=138.1
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEec
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYK 570 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 570 (646)
++|++.+.||+|+||+||+|+.+ +|+.||+|++........+.+.+|+++|+.++|||||++++++.+++..|+|||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 57999999999999999999865 79999999998766556678899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCC--CcEEEEeecCcccccC
Q 046544 571 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDN--LVAYLSDFGIAKLLIG 644 (646)
Q Consensus 571 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~--~~~ki~DfGla~~~~~ 644 (646)
+||+|.+++......+++.++..+++||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+.+..
T Consensus 237 ~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 999999999776667999999999999999999999 8899999999999999854 8999999999998754
No 87
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=5.3e-29 Score=269.95 Aligned_cols=242 Identities=19% Similarity=0.167 Sum_probs=192.0
Q ss_pred cCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEec
Q 046544 163 SLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELG 242 (646)
Q Consensus 163 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 242 (646)
+|+.|+|++|.+++..|..|..+++|++|+|++|.+++.+| |..+++|++|+|++|.|++..+ .++|++|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 45666666666666667788888999999999999887665 8888899999999998885443 3789999999
Q ss_pred CCcccccCCccccCCCCCceeecCCCccccc-ccccccccccccccCCCCcccCCCCCccC-ccccceEEEccccccccc
Q 046544 243 GNKLFGSIPACFSNLASLRILSLSSNELTSI-PLTFWNLKDILQLNFSSNFLTGPLPLEIG-NLKVLIGIDFSMNNFSSV 320 (646)
Q Consensus 243 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l-p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~ls~N~l~~~ 320 (646)
+|.|++..+.. +++|+.|+|++|.++.+ |..+..+++|+.|++++|.+++..|..+. .+++|+.|+|++|.+++.
T Consensus 108 ~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 99988766543 57889999999999877 45678888999999999999887787776 789999999999999876
Q ss_pred CccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCccee-eccCC-CC
Q 046544 321 IPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEG-EIPRG-GS 398 (646)
Q Consensus 321 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~-~~ 398 (646)
.+ +..+++|++|+|++|++++.+ ..|..+++|+.|+|++|.|++ +|..+..+++|+.|++++|++.+ .+|.. ..
T Consensus 185 ~~--~~~l~~L~~L~Ls~N~l~~~~-~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 185 KG--QVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp EC--CCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred cc--cccCCCCCEEECCCCCCCCCC-HhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 33 446899999999999999644 458899999999999999985 67788899999999999999983 33332 44
Q ss_pred CCCCcccccc-------CCccccCCCC
Q 046544 399 FGNFAAESFE-------GNELLCGSPT 418 (646)
Q Consensus 399 ~~~~~~~~~~-------~N~~~c~~~~ 418 (646)
+..+..+++. +|++.|.++.
T Consensus 261 l~~L~~l~~~~~~~~~~~~~~~c~~~~ 287 (487)
T 3oja_A 261 NQRVQTVAKQTVKKLTGQNEEECTVPT 287 (487)
T ss_dssp CHHHHHHHHHHHHHHTSSSSCCCSSTT
T ss_pred CCCCcEEeccccccccCCCcccccCCc
Confidence 5556666664 7888887654
No 88
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=4.1e-28 Score=243.51 Aligned_cols=209 Identities=27% Similarity=0.309 Sum_probs=137.2
Q ss_pred CCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecC
Q 046544 187 NSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLS 266 (646)
Q Consensus 187 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 266 (646)
++++|++++|++++..+..|.++++|++|++++|++++..+.+|..+++|++|+|++|++++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45566666666665555556666666666666666665555556666666666666666665555666666666666666
Q ss_pred CCccccccc-ccccccccccccCCCCcccCC-CCCccCccccceEEEcccccccccCccccCCCCCCC----EEEccCcc
Q 046544 267 SNELTSIPL-TFWNLKDILQLNFSSNFLTGP-LPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLE----YLFLGYNR 340 (646)
Q Consensus 267 ~N~l~~lp~-~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~----~L~Ls~N~ 340 (646)
+|.++.++. .+..+++|++|++++|.+++. +|..+..+++|+.|++++|.++++.+..|..+++|+ +|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 666665543 455556666666666666543 366666677777777777777766666666666665 78888888
Q ss_pred CCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccCC
Q 046544 341 LEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRG 396 (646)
Q Consensus 341 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 396 (646)
+++..+..+.. .+|+.|+|++|++++..+..|..+++|+.|++++|+++|.+|..
T Consensus 189 l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 189 MNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred ccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 87555555443 47888888888888666666778888888888888888766643
No 89
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=9.4e-29 Score=267.99 Aligned_cols=222 Identities=23% Similarity=0.215 Sum_probs=198.1
Q ss_pred cCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCcee
Q 046544 184 NLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRIL 263 (646)
Q Consensus 184 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 263 (646)
..++|+.|+|++|.+++.+|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.|++..+ .++|++|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 34489999999999999989999999999999999999997666 9999999999999999986543 3899999
Q ss_pred ecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccC-CCCCCCEEEccCccCC
Q 046544 264 SLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIG-GLKNLEYLFLGYNRLE 342 (646)
Q Consensus 264 ~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~ 342 (646)
++++|.++.+|.. .+++|+.|++++|.+++..|..++.+++|+.|++++|.+++..|..+. .+++|++|+|++|.++
T Consensus 105 ~L~~N~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 105 HAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp ECCSSCCCCEEEC--CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred ECcCCcCCCCCcc--ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 9999999988754 468899999999999999899999999999999999999998888886 7999999999999999
Q ss_pred CcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccCCCCCCCCccccccCCccccCCC
Q 046544 343 GSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFAAESFEGNELLCGSP 417 (646)
Q Consensus 343 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~ 417 (646)
+..+ +..+++|+.|+|++|.|++.. ..+..+++|+.|+|++|++++.++....++.+..+++++|++.|++.
T Consensus 183 ~~~~--~~~l~~L~~L~Ls~N~l~~~~-~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~~~ 254 (487)
T 3oja_A 183 DVKG--QVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTL 254 (487)
T ss_dssp EEEC--CCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHHHH
T ss_pred cccc--cccCCCCCEEECCCCCCCCCC-HhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCcch
Confidence 6633 446999999999999999654 45999999999999999999865555678899999999999998643
No 90
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=3.5e-31 Score=295.70 Aligned_cols=375 Identities=15% Similarity=0.106 Sum_probs=277.9
Q ss_pred CCCCCCEEECCCCcccccCCcCccCC--CCCCEEECcCCcC-cc-cCCccCcCCCCCCCEEEccCCccccc----CCccc
Q 046544 8 NLQNLEELDLRHNKLVGTVPAAIFNM--SMLKLLHLQNNSL-LG-CLSSIADVRLPNLEALLLWGNNFSGT----IPRFI 79 (646)
Q Consensus 8 ~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L~~N~l-~~-~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~ 79 (646)
.+++|++|+|++|.+++..+..+... .+|++|+|++|.- +. .+..+. ..+++|++|+|++|.+++. ++..+
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~-~~~~~L~~L~L~~~~~~~~~~~~l~~~~ 188 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIV-THCRKIKTLLMEESSFSEKDGKWLHELA 188 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHH-HHCTTCSEEECTTCEEECCCSHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHH-hhCCCCCEEECccccccCcchhHHHHHH
Confidence 78999999999999887666666663 4599999999872 11 011111 1478999999999998765 33455
Q ss_pred cCCCCCcEEEcccCcccc----ccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCc-CC-
Q 046544 80 FNASKLSILELSQNSFSG----FIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGI-LS- 153 (646)
Q Consensus 80 ~~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~-~~- 153 (646)
..+++|++|++++|.+++ ..+..+.++++|++|+|++|.+..+ +..+.++++|++|+++.+..... ..
T Consensus 189 ~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l------~~~~~~~~~L~~L~l~~~~~~~~~~~~ 262 (592)
T 3ogk_B 189 QHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILEL------VGFFKAAANLEEFCGGSLNEDIGMPEK 262 (592)
T ss_dssp HHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGG------HHHHHHCTTCCEEEECBCCCCTTCTTS
T ss_pred hcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHH------HHHHhhhhHHHhhcccccccccchHHH
Confidence 678999999999999973 3345567889999999999998764 34577889999999986432210 00
Q ss_pred cchhccccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccC-ccccCCCCCCeEEeecccccCcCchhhcC
Q 046544 154 KTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIP-ITLSKLQKLQGLGLDDNKLEGSIPDSICR 232 (646)
Q Consensus 154 ~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 232 (646)
...+. ..++|+.++++++... .+|..+..+++|++|++++|.+++... ..+..+++|++|+++++...+.++..+..
T Consensus 263 ~~~l~-~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~ 340 (592)
T 3ogk_B 263 YMNLV-FPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQY 340 (592)
T ss_dssp SSCCC-CCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHH
T ss_pred HHHhh-ccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHh
Confidence 11112 2357999999886433 567888899999999999999865544 34688999999999944333344555577
Q ss_pred CCCCcEEEec-----------CCcccccC-CccccCCCCCceeecCCCcccc-ccccccc-ccccccccCC----CCccc
Q 046544 233 LTELYELELG-----------GNKLFGSI-PACFSNLASLRILSLSSNELTS-IPLTFWN-LKDILQLNFS----SNFLT 294 (646)
Q Consensus 233 l~~L~~L~L~-----------~N~i~~~~-~~~~~~l~~L~~L~L~~N~l~~-lp~~~~~-l~~L~~L~l~----~N~l~ 294 (646)
+++|++|+++ .|.+++.. +..+.++++|++|+++.|.++. .+..+.. +++|+.|+++ .|.++
T Consensus 341 ~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~ 420 (592)
T 3ogk_B 341 CKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERIT 420 (592)
T ss_dssp CTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCS
T ss_pred CCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCcccc
Confidence 8999999999 36666432 2335568999999999999884 3344444 7899999996 67777
Q ss_pred CC-----CCCccCccccceEEEccccc--ccccCccccC-CCCCCCEEEccCccCCCc-ccccccCCCCCCEEEccCCcC
Q 046544 295 GP-----LPLEIGNLKVLIGIDFSMNN--FSSVIPTEIG-GLKNLEYLFLGYNRLEGS-IPDSFGDLISLKFLNLSNNNL 365 (646)
Q Consensus 295 ~~-----~~~~~~~l~~L~~L~ls~N~--l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l 365 (646)
+. ++..+.++++|+.|++++|. +++..+..+. .+++|++|++++|++++. .+..+.++++|+.|+|++|.+
T Consensus 421 ~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l 500 (592)
T 3ogk_B 421 DLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCF 500 (592)
T ss_dssp SCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCC
T ss_pred CchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCC
Confidence 54 23336678999999998543 6655555444 478999999999999863 455668899999999999998
Q ss_pred ccc-CCccccCCCCCCceeCcCCccee
Q 046544 366 SGA-IPTSLEKLSYLEDLNLSFNKLEG 391 (646)
Q Consensus 366 ~~~-~p~~~~~l~~L~~L~L~~N~l~~ 391 (646)
++. ++..+..+++|++|+|++|+++.
T Consensus 501 ~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 501 SERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp BHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred cHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 754 44555689999999999999875
No 91
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.95 E-value=2e-27 Score=239.83 Aligned_cols=205 Identities=24% Similarity=0.201 Sum_probs=125.5
Q ss_pred ccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCC
Q 046544 181 EITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASL 260 (646)
Q Consensus 181 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 260 (646)
.+.++++++++++++|.++.+++. +. ++++.|+|++|.+++..+..|..+++|++|+|++|.|++..+. ..+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~ip~~-~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTALPPD-LP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCSSCCSC-CC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred cccccCCccEEECCCCCCCcCCCC-CC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 356677888888888888754433 32 5777888888888777777777888888888888887755442 667777
Q ss_pred ceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCcc
Q 046544 261 RILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNR 340 (646)
Q Consensus 261 ~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 340 (646)
++|++++|.++.+|..+..+++|+.|++++|.+++..+..|..+++|+.|++++|++++..+..|..+++|+.|+|++|+
T Consensus 80 ~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 80 GTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp CEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CEEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 77777777777777666666666666666666665555555555555555555555555544455555555555555555
Q ss_pred CCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCccee
Q 046544 341 LEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEG 391 (646)
Q Consensus 341 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 391 (646)
+++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.++|++|++.|
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 55444444455555555555555554 344444444444444444444433
No 92
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.95 E-value=4.4e-27 Score=237.30 Aligned_cols=210 Identities=27% Similarity=0.276 Sum_probs=187.7
Q ss_pred cccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccccccccccccc
Q 046544 205 TLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDIL 284 (646)
Q Consensus 205 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~ 284 (646)
.+.++++++++++++|.++. +|..+. ++++.|+|++|++++..+..|.++++|++|++++|.|+.+|.. ..+++|+
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~ 80 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLG 80 (290)
T ss_dssp EEECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCC
T ss_pred cccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCC
Confidence 46788899999999999994 555443 6899999999999988899999999999999999999998765 7889999
Q ss_pred cccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCc
Q 046544 285 QLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNN 364 (646)
Q Consensus 285 ~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 364 (646)
.|++++|.++ .+|..+..+++|+.|++++|+++++.|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 9999999998 578889999999999999999999888999999999999999999998888889999999999999999
Q ss_pred CcccCCccccCCCCCCceeCcCCcceeeccCCCCCCCCccccccCCccccCCCCc
Q 046544 365 LSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFAAESFEGNELLCGSPTL 419 (646)
Q Consensus 365 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~~~ 419 (646)
|++..+..|..+++|+.|+|++|+++..++.......++.+++.+|||.|+|...
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c~~~ 214 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCEIL 214 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSGGGH
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcCccH
Confidence 9977777889999999999999999965555556778999999999999988653
No 93
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=3e-27 Score=237.16 Aligned_cols=205 Identities=21% Similarity=0.205 Sum_probs=168.5
Q ss_pred cCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEec
Q 046544 163 SLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELG 242 (646)
Q Consensus 163 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 242 (646)
++++|++++|++++..+..|.++++|++|++++|++.+..+..|.++++|++|++++|++++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45555555555555566677888888888888888887777788888888888888888887777888888888888888
Q ss_pred CCcccccCCccccCCCCCceeecCCCcccc--cccccccccccccccCCCCcccCCCCCccCccccce----EEEccccc
Q 046544 243 GNKLFGSIPACFSNLASLRILSLSSNELTS--IPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLI----GIDFSMNN 316 (646)
Q Consensus 243 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~--lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~----~L~ls~N~ 316 (646)
+|++.+..+..|..+++|++|++++|.++. +|..+..+++|+.|++++|.+++..+..+..++.|+ .|++++|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 888887777778888888888888888886 577788888888888888888877777777777776 89999999
Q ss_pred ccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCccc
Q 046544 317 FSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGA 368 (646)
Q Consensus 317 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 368 (646)
++++.+..+.. .+|++|++++|++++..+..|..+++|+.|+|++|++++.
T Consensus 189 l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 189 MNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp CCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred ccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 99877766655 4899999999999988778889999999999999999854
No 94
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=9.8e-27 Score=232.56 Aligned_cols=205 Identities=28% Similarity=0.346 Sum_probs=138.6
Q ss_pred CCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecC
Q 046544 187 NSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLS 266 (646)
Q Consensus 187 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 266 (646)
+.+.+++++|+++. +|..+. +++++|++++|++++..+.+|..+++|++|+|++|+++.+.+..|.++++|++|+++
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 34566666666663 333332 456666666666666555566666667777777776665555666666677777777
Q ss_pred CCccccccc-ccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcc
Q 046544 267 SNELTSIPL-TFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSI 345 (646)
Q Consensus 267 ~N~l~~lp~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 345 (646)
+|.++.+|. .|..+++|++|++++|.+++..+..|..+++|+.|++++|.++++.+..|+.+++|++|++++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 776666654 3455666666666666666666666677777777777777777766666777777777777777777666
Q ss_pred cccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeecc
Q 046544 346 PDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIP 394 (646)
Q Consensus 346 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 394 (646)
+..|..+++|+.|+|++|++++..+..|..+++|+.|++++|++.+.++
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 6677777777777777777776666667777777777777777766554
No 95
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.95 E-value=4.9e-28 Score=257.55 Aligned_cols=157 Identities=24% Similarity=0.286 Sum_probs=139.6
Q ss_pred HHHHHHHhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEec
Q 046544 484 YLELCRATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559 (646)
Q Consensus 484 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~ 559 (646)
+.++....++|+..++||+|+||+||+|+.+ +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 4455556688999999999999999999976 58899999997532 2223447889999999999999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCc
Q 046544 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639 (646)
Q Consensus 560 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla 639 (646)
++..|+|||||+||+|.+++......+++..+..++.|++.|++||| ..+|+||||||+|||++.++.+||+|||+|
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 99999999999999999999876667999999999999999999999 889999999999999999999999999999
Q ss_pred cccc
Q 046544 640 KLLI 643 (646)
Q Consensus 640 ~~~~ 643 (646)
+.+.
T Consensus 223 ~~~~ 226 (437)
T 4aw2_A 223 LKLM 226 (437)
T ss_dssp EECC
T ss_pred hhcc
Confidence 8654
No 96
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.7e-26 Score=230.76 Aligned_cols=206 Identities=29% Similarity=0.373 Sum_probs=187.6
Q ss_pred CCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccccc-cccccccccccC
Q 046544 210 QKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLT-FWNLKDILQLNF 288 (646)
Q Consensus 210 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~L~l 288 (646)
.+.+.++++++.++. +|..+. +++++|+|++|++++..+..|.++++|++|++++|.++.+|.. |..+++|++|++
T Consensus 16 ~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 16 NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 367899999999994 665554 5899999999999988888999999999999999999999875 578999999999
Q ss_pred CCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCccc
Q 046544 289 SSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGA 368 (646)
Q Consensus 289 ~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 368 (646)
++|.+++..+..|..+++|+.|++++|.+++..+..|+.+++|++|+|++|++++..+..|..+++|+.|+|++|++++.
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 99999988888899999999999999999999999999999999999999999988888899999999999999999988
Q ss_pred CCccccCCCCCCceeCcCCcceeeccCC-CCCCCCccccccCCccccCCCC
Q 046544 369 IPTSLEKLSYLEDLNLSFNKLEGEIPRG-GSFGNFAAESFEGNELLCGSPT 418 (646)
Q Consensus 369 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~~~~~~~~~~~N~~~c~~~~ 418 (646)
.+..|..+++|++|++++|++++.++.. ..+..++.+++++|||.|+|+.
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCcc
Confidence 8888999999999999999999866543 4578899999999999998863
No 97
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.94 E-value=1.5e-26 Score=236.37 Aligned_cols=149 Identities=26% Similarity=0.446 Sum_probs=138.3
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEec
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYK 570 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 570 (646)
++|...+.||+|+||+||+|+.. +++.||+|++........+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 57888999999999999999975 68999999987665566778999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 571 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 571 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
++|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 159 (310)
T 3s95_A 90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMV 159 (310)
T ss_dssp TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence 999999999987778999999999999999999999 8899999999999999999999999999998653
No 98
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.94 E-value=2.6e-26 Score=232.90 Aligned_cols=147 Identities=30% Similarity=0.404 Sum_probs=136.1
Q ss_pred CCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEec
Q 046544 492 NGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYK 570 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 570 (646)
++|+..+.||+|+||.||+|+. .+|+.||+|++........+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 99 (297)
T 3fxz_A 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (297)
T ss_dssp GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECC
Confidence 5799999999999999999985 479999999998766556678899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 571 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 571 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
++|+|.+++... .+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 100 ~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 100 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp TTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred CCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 999999999775 4889999999999999999999 8899999999999999999999999999988654
No 99
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.94 E-value=1.7e-26 Score=237.32 Aligned_cols=149 Identities=27% Similarity=0.448 Sum_probs=135.7
Q ss_pred hCCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
..+|+..+.||+|+||.||+|++ .+|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..|+||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46899999999999999999997 579999999997653 234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||+++|+|.+++...+ .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 94 e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp CCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred ECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 9999999999997654 5899999999999999999999 8899999999999999999999999999998654
No 100
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.94 E-value=4.6e-26 Score=233.71 Aligned_cols=159 Identities=28% Similarity=0.313 Sum_probs=142.8
Q ss_pred ccccHHHHHHHhCC----------CCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCC
Q 046544 480 RTFSYLELCRATNG----------FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHR 548 (646)
Q Consensus 480 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~ 548 (646)
..++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.+++.++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45778888877764 666789999999999999976 7999999999877666667889999999999999
Q ss_pred CceeEEEEEecCCeeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCC
Q 046544 549 NLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDN 628 (646)
Q Consensus 549 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~ 628 (646)
||+++++++...+..++||||+++|+|.+++... .+++..+..++.|++.|++||| ..+|+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCC
Confidence 9999999999999999999999999999998654 5899999999999999999999 8899999999999999999
Q ss_pred CcEEEEeecCccccc
Q 046544 629 LVAYLSDFGIAKLLI 643 (646)
Q Consensus 629 ~~~ki~DfGla~~~~ 643 (646)
+.+||+|||+++.+.
T Consensus 178 ~~~kl~Dfg~~~~~~ 192 (321)
T 2c30_A 178 GRVKLSDFGFCAQIS 192 (321)
T ss_dssp CCEEECCCTTCEECC
T ss_pred CcEEEeeeeeeeecc
Confidence 999999999988754
No 101
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.94 E-value=9.1e-27 Score=246.03 Aligned_cols=157 Identities=25% Similarity=0.312 Sum_probs=139.4
Q ss_pred HHHHHHHhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEec
Q 046544 484 YLELCRATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559 (646)
Q Consensus 484 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~ 559 (646)
+.+.....++|+..+.||+|+||+||+|+.+ +|+.||+|++.... ....+.+.+|+.++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3444455678999999999999999999975 79999999997532 2233457889999999999999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCc
Q 046544 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639 (646)
Q Consensus 560 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla 639 (646)
++..|+||||++||+|.+++...+..+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+|
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhh
Confidence 99999999999999999999876557899999999999999999999 889999999999999999999999999999
Q ss_pred cccc
Q 046544 640 KLLI 643 (646)
Q Consensus 640 ~~~~ 643 (646)
+.+.
T Consensus 210 ~~~~ 213 (412)
T 2vd5_A 210 LKLR 213 (412)
T ss_dssp EECC
T ss_pred eecc
Confidence 8764
No 102
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.94 E-value=1.1e-26 Score=238.49 Aligned_cols=156 Identities=38% Similarity=0.612 Sum_probs=141.6
Q ss_pred HHHHHHHhCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCee
Q 046544 484 YLELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFK 563 (646)
Q Consensus 484 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~ 563 (646)
+.++...+++|+..+.||+|+||.||+|++++|+.||+|++........+.+.+|+++++.++||||+++++++...+..
T Consensus 31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (321)
T 2qkw_B 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110 (321)
T ss_dssp CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence 34445567899999999999999999999888999999998876666678899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcc
Q 046544 564 ALVLEYKPHGSLEKYLYSSN---CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640 (646)
Q Consensus 564 ~lv~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~ 640 (646)
++||||+++|+|.+++.... ..+++..+..++.|++.|++||| .++|+||||||+||+++.++.+||+|||+++
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 187 (321)
T 2qkw_B 111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK 187 (321)
T ss_dssp EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence 99999999999999986543 35889999999999999999999 8899999999999999999999999999998
Q ss_pred cc
Q 046544 641 LL 642 (646)
Q Consensus 641 ~~ 642 (646)
..
T Consensus 188 ~~ 189 (321)
T 2qkw_B 188 KG 189 (321)
T ss_dssp EC
T ss_pred cc
Confidence 64
No 103
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.93 E-value=3e-26 Score=236.90 Aligned_cols=150 Identities=29% Similarity=0.422 Sum_probs=133.7
Q ss_pred HhCCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 490 ATNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 490 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
..++|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 347899999999999999999986 479999999997654 233457889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||+++|+|.+++...+ .+++.++..++.|++.|++||| ..+|+||||||+||++++++.+||+|||+|+...
T Consensus 88 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 159 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPK 159 (347)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence 9999999999997654 6899999999999999999999 8899999999999999999999999999987653
No 104
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.93 E-value=3.5e-26 Score=235.03 Aligned_cols=149 Identities=30% Similarity=0.500 Sum_probs=134.8
Q ss_pred CCCCcceeecccccceEEEEEeC----CCcEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALV 566 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv 566 (646)
++|+..+.||+|+||.||+|++. .+..||||++.... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 46778899999999999999874 35569999997653 33456789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 567 LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|||+++|+|.+++......+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 9999999999999877678999999999999999999999 8899999999999999999999999999998764
No 105
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.93 E-value=3.8e-26 Score=235.40 Aligned_cols=147 Identities=27% Similarity=0.360 Sum_probs=133.7
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEecc---CCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ---CGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
++|+..+.||+|+||+||+|+.. +|+.||+|+++.. .....+.+.+|+.+++.++||||+++++++...+..|+||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57889999999999999999965 6999999999754 2334567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
||++||+|.+++...+ .+++..+..++.||+.||+||| .++|+||||||+||+++.++.+||+|||+|+..
T Consensus 85 E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 155 (337)
T 1o6l_A 85 EYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155 (337)
T ss_dssp ECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence 9999999999987654 6889999999999999999999 889999999999999999999999999999864
No 106
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.93 E-value=1.8e-26 Score=243.55 Aligned_cols=154 Identities=25% Similarity=0.311 Sum_probs=136.2
Q ss_pred HHHHHHhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecC
Q 046544 485 LELCRATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNE 560 (646)
Q Consensus 485 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~ 560 (646)
.++....++|+..+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.++
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 344445578999999999999999999975 68999999997531 22234578899999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcc
Q 046544 561 EFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640 (646)
Q Consensus 561 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~ 640 (646)
+..|+|||||+||+|.+++... .+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+|+
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 9999999999999999999765 4889999999999999999999 8899999999999999999999999999998
Q ss_pred ccc
Q 046544 641 LLI 643 (646)
Q Consensus 641 ~~~ 643 (646)
.+.
T Consensus 217 ~~~ 219 (410)
T 3v8s_A 217 KMN 219 (410)
T ss_dssp ECC
T ss_pred eec
Confidence 764
No 107
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.93 E-value=4.6e-26 Score=236.30 Aligned_cols=148 Identities=28% Similarity=0.345 Sum_probs=133.2
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhC-CCCCceeEEEEEecCCeeEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSI-RHRNLIKVISSCSNEEFKAL 565 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~~~~l 565 (646)
.++|+..+.||+|+||+||+|+.. +|+.||+|++.... ....+.+.+|.++++.+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 478999999999999999999965 68999999997542 23446678899999988 79999999999999999999
Q ss_pred EEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 566 VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
||||++||+|.+++...+ .+++..+..++.|++.||+||| .++|+||||||+||+++.++.+||+|||+|+..
T Consensus 102 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 999999999999997654 6899999999999999999999 889999999999999999999999999999864
No 108
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.93 E-value=6.6e-26 Score=226.47 Aligned_cols=148 Identities=29% Similarity=0.454 Sum_probs=136.5
Q ss_pred CCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEecC
Q 046544 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKP 571 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 571 (646)
++|+..+.||+|+||.||+|++.+++.||+|++..... ..+++.+|++++++++||||+++++++..++..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 57888999999999999999998899999999975533 34678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 572 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 572 ~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
+|+|.+++......+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+...
T Consensus 89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 157 (269)
T 4hcu_A 89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL 157 (269)
T ss_dssp TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEecccccccccc
Confidence 99999999877777899999999999999999999 8899999999999999999999999999998653
No 109
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=1e-25 Score=231.04 Aligned_cols=149 Identities=20% Similarity=0.302 Sum_probs=135.5
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEe
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 569 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 569 (646)
.++|+..+.||+|+||.||+|+.. +++.||+|++.... .....+.+|+++++.++||||+++++++...+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 367899999999999999999865 68999999987543 3446788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcC--CCcEEEEeecCccccc
Q 046544 570 KPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD--NLVAYLSDFGIAKLLI 643 (646)
Q Consensus 570 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~--~~~~ki~DfGla~~~~ 643 (646)
++||+|.+++......+++.++..++.|++.|++||| ..+|+||||||+||+++. ++.+||+|||+|+.+.
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence 9999999999876667999999999999999999999 889999999999999986 7899999999998764
No 110
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.93 E-value=3.2e-26 Score=239.71 Aligned_cols=149 Identities=28% Similarity=0.522 Sum_probs=129.5
Q ss_pred CCCCcceeecccccceEEEEEeC----CCcEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALV 566 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv 566 (646)
.+|+..+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 47889999999999999999864 57789999987653 33456799999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 567 LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|||+++|+|.+++...+..+++.++..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 9999999999999887777999999999999999999999 8899999999999999999999999999998764
No 111
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.93 E-value=6.2e-26 Score=237.35 Aligned_cols=149 Identities=29% Similarity=0.512 Sum_probs=132.9
Q ss_pred CCCCcceeecccccceEEEEEe--------CCCcEEEEEEEeccC-CchHHHHHHHHHHHHhC-CCCCceeEEEEEecCC
Q 046544 492 NGFSENNLIGRGGFGSVYKARL--------GDGMEVAVKVFNLQC-GRAFKSFAVECEMMKSI-RHRNLIKVISSCSNEE 561 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~ 561 (646)
++|+..+.||+|+||.||+|++ .++..||||+++... ....+.+.+|+++++.+ +||||+++++++..++
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 5788899999999999999985 235679999987553 23456789999999999 8999999999999999
Q ss_pred eeEEEEEecCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEc
Q 046544 562 FKALVLEYKPHGSLEKYLYSSN---------------CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLD 626 (646)
Q Consensus 562 ~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~ 626 (646)
..|+||||+++|+|.+++.... ..+++.++..++.|++.||+||| .++|+||||||+||+++
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~ 237 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVT 237 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEC
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEEC
Confidence 9999999999999999998653 24788999999999999999999 88999999999999999
Q ss_pred CCCcEEEEeecCccccc
Q 046544 627 DNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 627 ~~~~~ki~DfGla~~~~ 643 (646)
.++.+||+|||+|+.+.
T Consensus 238 ~~~~~kl~DFG~a~~~~ 254 (370)
T 2psq_A 238 ENNVMKIADFGLARDIN 254 (370)
T ss_dssp TTCCEEECCCSSCEETT
T ss_pred CCCCEEEccccCCcccC
Confidence 99999999999998654
No 112
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.93 E-value=3.6e-26 Score=235.19 Aligned_cols=166 Identities=39% Similarity=0.590 Sum_probs=145.7
Q ss_pred ccccccHHHHHHHhCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCC-chHHHHHHHHHHHHhCCCCCceeEEEE
Q 046544 478 TWRTFSYLELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKVISS 556 (646)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~~~~~ 556 (646)
....+++.++....++|+..+.||+|+||.||+|+..+|+.||||++..... .....+.+|+++++.++||||++++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 3467888999999999999999999999999999988899999999875432 223468899999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEE
Q 046544 557 CSNEEFKALVLEYKPHGSLEKYLYSSN---CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYL 633 (646)
Q Consensus 557 ~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki 633 (646)
+...+..++||||+++|+|.+++.... ..+++..+..++.|++.|++|||..+..+|+||||||+||+++.++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 999999999999999999999997653 34899999999999999999999433339999999999999999999999
Q ss_pred EeecCccccc
Q 046544 634 SDFGIAKLLI 643 (646)
Q Consensus 634 ~DfGla~~~~ 643 (646)
+|||+|+.+.
T Consensus 176 ~Dfg~~~~~~ 185 (326)
T 3uim_A 176 GDFGLAKLMD 185 (326)
T ss_dssp CCCSSCEECC
T ss_pred ccCccccccC
Confidence 9999998653
No 113
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.93 E-value=9.7e-26 Score=230.59 Aligned_cols=148 Identities=28% Similarity=0.369 Sum_probs=134.3
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
++|+..+.||+|+||+||+|+.. +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 57889999999999999999965 69999999997542 234567788999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||++||+|.+++.... .+++..+..++.|++.|++||| .++|+||||||+||+++.++.+||+|||+|+...
T Consensus 86 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp CCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 9999999999998754 6889999999999999999999 8999999999999999999999999999998653
No 114
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.93 E-value=7.4e-26 Score=221.91 Aligned_cols=196 Identities=19% Similarity=0.258 Sum_probs=105.3
Q ss_pred CCCEEEccCCccccccCccccCCCCCCeEEeeccc-ccCcCchhhcCCCCCcEEEecC-CcccccCCccccCCCCCceee
Q 046544 187 NSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNK-LEGSIPDSICRLTELYELELGG-NKLFGSIPACFSNLASLRILS 264 (646)
Q Consensus 187 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~ 264 (646)
++++|++++|+++++++..|.++++|++|++++|+ ++.+.+.+|.++++|++|++++ |+++++.+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 45555555555555555555555555555555554 5544444555555555555555 555555555555555555555
Q ss_pred cCCCcccccccccccccccc---cccCCCC-cccCCCCCccCccccce-EEEcccccccccCccccCCCCCCCEEEccCc
Q 046544 265 LSSNELTSIPLTFWNLKDIL---QLNFSSN-FLTGPLPLEIGNLKVLI-GIDFSMNNFSSVIPTEIGGLKNLEYLFLGYN 339 (646)
Q Consensus 265 L~~N~l~~lp~~~~~l~~L~---~L~l~~N-~l~~~~~~~~~~l~~L~-~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 339 (646)
+++|.++.+|. +..+++|+ .|++++| .+++..+..|..+++|+ .|++++|.++.+.+..|.. ++|+.|++++|
T Consensus 112 l~~n~l~~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n 189 (239)
T 2xwt_C 112 IFNTGLKMFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKN 189 (239)
T ss_dssp EEEECCCSCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTC
T ss_pred CCCCCCccccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCC
Confidence 55555555554 44444444 5555555 44444444455555555 5555555555444444444 55666666666
Q ss_pred c-CCCcccccccCC-CCCCEEEccCCcCcccCCccccCCCCCCceeCcCC
Q 046544 340 R-LEGSIPDSFGDL-ISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFN 387 (646)
Q Consensus 340 ~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 387 (646)
+ +++..+..|..+ ++|+.|++++|++++ +|.. .+++|+.|+++++
T Consensus 190 ~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 190 KYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp TTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred CCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 3 554445555555 566666666666653 2222 3455555555544
No 115
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=6.5e-26 Score=226.80 Aligned_cols=227 Identities=24% Similarity=0.272 Sum_probs=123.5
Q ss_pred CcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccC
Q 046544 85 LSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSL 164 (646)
Q Consensus 85 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L 164 (646)
+..++++.+.+.+. ..+..+++|+.|++++|.++.++ .+..+++|++|++++|.++++
T Consensus 21 l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~~-------~l~~l~~L~~L~l~~n~l~~~------------- 78 (272)
T 3rfs_A 21 TIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKSVQ-------GIQYLPNVRYLALGGNKLHDI------------- 78 (272)
T ss_dssp HHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCCCT-------TGGGCTTCCEEECTTSCCCCC-------------
T ss_pred HHHHHhcCcccccc--cccccccceeeeeeCCCCccccc-------ccccCCCCcEEECCCCCCCCc-------------
Confidence 33444444444433 22445555666666655555432 234445555555555544322
Q ss_pred cEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCC
Q 046544 165 KDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGN 244 (646)
Q Consensus 165 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 244 (646)
..+..+++|++|++++|++++..+..|.++++|++|++++|++++..+..|..+++|++|++++|
T Consensus 79 ---------------~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 143 (272)
T 3rfs_A 79 ---------------SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHN 143 (272)
T ss_dssp ---------------GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred ---------------hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCC
Confidence 12344445555555555555444444455555555555555555444444455555555555555
Q ss_pred cccccCCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccc
Q 046544 245 KLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTE 324 (646)
Q Consensus 245 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~ 324 (646)
++++..+..|..+++|+.|++++|.++. ..+..+..+++|+.|++++|.+++..|..
T Consensus 144 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~-----------------------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 200 (272)
T 3rfs_A 144 QLQSLPKGVFDKLTNLTELDLSYNQLQS-----------------------LPEGVFDKLTQLKDLRLYQNQLKSVPDGV 200 (272)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCC-----------------------CCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred ccCccCHHHhccCccCCEEECCCCCcCc-----------------------cCHHHhcCCccCCEEECCCCcCCccCHHH
Confidence 5544444444444444444444444443 33444555666666666666666666666
Q ss_pred cCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCC
Q 046544 325 IGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSY 378 (646)
Q Consensus 325 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 378 (646)
|+.+++|++|++++|++.+. +++|+.|+++.|.++|.+|.+++.++.
T Consensus 201 ~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 201 FDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp TTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred HhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 77777777777777776633 446777778888888888877765543
No 116
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.93 E-value=9e-26 Score=225.35 Aligned_cols=149 Identities=30% Similarity=0.426 Sum_probs=136.7
Q ss_pred hCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEec
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYK 570 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 570 (646)
.++|+..+.||+|+||.||+|+.+++..||+|++..... ..+++.+|++++++++||||+++++++..++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 357889999999999999999998888999999975543 3467899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 571 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 571 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
++++|.+++...+..+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+...
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 155 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVL 155 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECC
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecc
Confidence 999999999876666899999999999999999999 8899999999999999999999999999998654
No 117
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.93 E-value=1.1e-25 Score=229.84 Aligned_cols=148 Identities=26% Similarity=0.401 Sum_probs=133.3
Q ss_pred CCCCcceeecccccceEEEEEeCCCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEe
Q 046544 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 569 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 569 (646)
++|+..+.||+|+||.||+|+..+|+.||+|++.... ....+.+.+|++++++++||||+++++++..++..++||||
T Consensus 21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 100 (311)
T 3niz_A 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF 100 (311)
T ss_dssp CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEEC
T ss_pred hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcC
Confidence 6789999999999999999999889999999987543 23346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 570 KPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 570 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
+++ ++.+++......+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 101 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 101 MEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp CSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred CCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 975 898888877777999999999999999999999 8899999999999999999999999999998753
No 118
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.93 E-value=1.9e-25 Score=232.37 Aligned_cols=149 Identities=26% Similarity=0.384 Sum_probs=134.1
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC------chHHHHHHHHHHHHhCCCCCceeEEEEEecCCee
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG------RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFK 563 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~ 563 (646)
.+.|+..+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|+.+++.++||||+++++++...+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 357899999999999999999965 699999999986532 1346789999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCC----cEEEEeecCc
Q 046544 564 ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNL----VAYLSDFGIA 639 (646)
Q Consensus 564 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~----~~ki~DfGla 639 (646)
++||||++||+|.+++...+ .+++..+..++.||+.|++||| ..+|+||||||+||++++++ .+||+|||+|
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 99999999999999997654 6899999999999999999999 88999999999999998776 7999999999
Q ss_pred cccc
Q 046544 640 KLLI 643 (646)
Q Consensus 640 ~~~~ 643 (646)
+.+.
T Consensus 167 ~~~~ 170 (361)
T 2yab_A 167 HEIE 170 (361)
T ss_dssp EECC
T ss_pred eEcC
Confidence 8764
No 119
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.93 E-value=9.6e-26 Score=233.03 Aligned_cols=151 Identities=24% Similarity=0.351 Sum_probs=133.6
Q ss_pred HHHhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhC-CCCCceeEEEEEecCCe
Q 046544 488 CRATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSI-RHRNLIKVISSCSNEEF 562 (646)
Q Consensus 488 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~~ 562 (646)
....++|+..+.||+|+||+||+|+.+ +|+.||+|+++... ....+.+..|..+++.+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345578999999999999999999975 68999999997542 23446678899999876 99999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 563 KALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 563 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
.|+||||++||+|.+++...+ .+++..+..++.|++.||+||| .++|+||||||+||+++.++.+||+|||+|+..
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 999999999999999997654 5899999999999999999999 889999999999999999999999999999864
No 120
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.93 E-value=1.5e-25 Score=230.89 Aligned_cols=151 Identities=23% Similarity=0.396 Sum_probs=130.8
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecCC-------
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEE------- 561 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~------- 561 (646)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 357889999999999999999976 79999999997554 345578899999999999999999999886543
Q ss_pred --------------------------------------------------eeEEEEEecCCCCHHHHHhhCCC--CCCHH
Q 046544 562 --------------------------------------------------FKALVLEYKPHGSLEKYLYSSNC--ILDIF 589 (646)
Q Consensus 562 --------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~--~l~~~ 589 (646)
..++|||||++|+|.+++..... ..++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 37999999999999999986542 34566
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccccC
Q 046544 590 QRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644 (646)
Q Consensus 590 ~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~~ 644 (646)
.+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+|+.+..
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 216 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ 216 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSC
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCccccccc
Confidence 78899999999999999 88999999999999999999999999999987643
No 121
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.93 E-value=3.4e-26 Score=240.17 Aligned_cols=150 Identities=29% Similarity=0.448 Sum_probs=135.3
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC-chHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 568 (646)
.++|+..+.||+|+||.||+|++. +++.||||+++.... ...+++.+|+++++.++||||+++++++..++..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 357888999999999999999976 789999999875432 234578899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 569 YKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|+++|+|.+++...+..+++..+..++.|++.||+||| .++|+||||||+||+++.++.+||+|||+|+...
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 99999999999876666899999999999999999999 8899999999999999999999999999998643
No 122
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.93 E-value=9.8e-26 Score=235.87 Aligned_cols=148 Identities=28% Similarity=0.371 Sum_probs=134.4
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++|||||++++++.+.+..|+||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 57889999999999999999865 68999999987542 234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||++||+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 95 e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp CCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 9999999999997654 6899999999999999999999 8899999999999999999999999999998753
No 123
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.93 E-value=3.4e-26 Score=231.83 Aligned_cols=149 Identities=31% Similarity=0.504 Sum_probs=133.4
Q ss_pred CCCCcceeecccccceEEEEEe-----CCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecC--CeeE
Q 046544 492 NGFSENNLIGRGGFGSVYKARL-----GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNE--EFKA 564 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~--~~~~ 564 (646)
++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 5788999999999999999984 36889999999876666667899999999999999999999998654 4589
Q ss_pred EEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 565 LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
+||||+++|+|.+++......+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 999999999999999887667899999999999999999999 8899999999999999999999999999998753
No 124
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.93 E-value=1.2e-25 Score=227.60 Aligned_cols=148 Identities=27% Similarity=0.437 Sum_probs=134.0
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..|+||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 57899999999999999999865 68999999986543 233467889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||++||+|.+++...+ .+++..+..++.|++.|++|+| +.+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 91 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp ECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 9999999999997654 6899999999999999999999 8899999999999999999999999999998653
No 125
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.93 E-value=8.8e-26 Score=237.02 Aligned_cols=147 Identities=27% Similarity=0.313 Sum_probs=131.4
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhC-CCCCceeEEEEEecCCeeEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSI-RHRNLIKVISSCSNEEFKALV 566 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~~~~lv 566 (646)
++|+..+.||+|+||+||+|+.+ +++.||+|+++... ....+.+.+|..+++++ +||||+++++++.+++..|+|
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV 131 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 131 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence 57899999999999999999965 68899999998653 22335678899999876 899999999999999999999
Q ss_pred EEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 567 LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
|||++||+|.+++...+ .+++..+..++.||+.||+||| ..+|+||||||+|||++.++.+||+|||+|+..
T Consensus 132 ~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 132 IEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 99999999999987654 6899999999999999999999 889999999999999999999999999999863
No 126
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=1.3e-25 Score=224.52 Aligned_cols=205 Identities=26% Similarity=0.281 Sum_probs=172.3
Q ss_pred ccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCC
Q 046544 181 EITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASL 260 (646)
Q Consensus 181 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 260 (646)
....+++|+.|++++|.+... ..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++..+..|.++++|
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 111 (272)
T 3rfs_A 36 TQNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNL 111 (272)
T ss_dssp CHHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred ccccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCC
Confidence 355677788888888887643 3477788888888888888753 467888888888888888887777778888888
Q ss_pred ceeecCCCcccccccc-cccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCc
Q 046544 261 RILSLSSNELTSIPLT-FWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYN 339 (646)
Q Consensus 261 ~~L~L~~N~l~~lp~~-~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 339 (646)
++|++++|.++.+|.. |..+++|++|++++|.+++..+..+..+++|+.|++++|++++..+..|+.+++|++|++++|
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 8888888888877654 677888888888888888777778889999999999999999888888999999999999999
Q ss_pred cCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccCC
Q 046544 340 RLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRG 396 (646)
Q Consensus 340 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 396 (646)
++++..|..|..+++|+.|++++|.+.+. ++.|+.+++..|.++|.+|..
T Consensus 192 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 192 QLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCT
T ss_pred cCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCc
Confidence 99988888899999999999999988744 557899999999999998876
No 127
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.93 E-value=1.8e-25 Score=234.61 Aligned_cols=150 Identities=21% Similarity=0.328 Sum_probs=136.4
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEec
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYK 570 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 570 (646)
++|+..+.||+|+||.||+|+.. +|+.||+|++..........+.+|+++++.++||||+++++++...+..++||||+
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 130 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence 57899999999999999999865 68999999998765555567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcC--CCcEEEEeecCcccccC
Q 046544 571 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD--NLVAYLSDFGIAKLLIG 644 (646)
Q Consensus 571 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~--~~~~ki~DfGla~~~~~ 644 (646)
++|+|.+++...+..+++..+..++.|++.||+||| ..+|+||||||+||+++. .+.+||+|||+|+.+..
T Consensus 131 ~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 131 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 999999999876667899999999999999999999 889999999999999974 57899999999987643
No 128
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.93 E-value=1.5e-25 Score=231.98 Aligned_cols=147 Identities=28% Similarity=0.314 Sum_probs=132.7
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhC-CCCCceeEEEEEecCCeeEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSI-RHRNLIKVISSCSNEEFKALV 566 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~~~~lv 566 (646)
++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++++ +||||+++++++.+++..|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57889999999999999999975 68999999998653 23345678899999988 899999999999999999999
Q ss_pred EEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 567 LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
|||++||+|.+++...+ .+++..+..++.|++.||+||| .++|+||||||+||+++.++.+||+|||+|+..
T Consensus 89 ~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 99999999999997654 6899999999999999999999 889999999999999999999999999999864
No 129
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.93 E-value=1.5e-25 Score=232.27 Aligned_cols=148 Identities=24% Similarity=0.340 Sum_probs=134.4
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
++|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..|+||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57889999999999999999975 69999999997542 234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||++||+|.+++...+ .+++..+..++.|++.||+||| .++|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 121 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp ECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceecc
Confidence 9999999999997654 5899999999999999999999 8899999999999999999999999999998754
No 130
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.93 E-value=1.4e-25 Score=225.89 Aligned_cols=149 Identities=26% Similarity=0.443 Sum_probs=133.7
Q ss_pred hCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEec
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYK 570 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 570 (646)
.++|+..+.||+|+||.||+|++.++..||+|++..... ..+++.+|+++++.++||||+++++++...+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 467888999999999999999998889999999975533 3467899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 571 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 571 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
++|+|.+++......+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+...
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 171 (283)
T 3gen_A 102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171 (283)
T ss_dssp TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccc
Confidence 999999999875567899999999999999999999 8899999999999999999999999999998653
No 131
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.93 E-value=1.1e-25 Score=230.96 Aligned_cols=148 Identities=24% Similarity=0.354 Sum_probs=131.7
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC-chHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 568 (646)
.++|+..+.||+|+||+||+|+.. +++.||+|++..... ...+.+.+|+.+++.++||||+++++++..++..|+|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 368999999999999999999875 789999999975532 234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 569 YKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
|+++|+|.+++.... .+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+.+
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 155 (323)
T 3tki_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVF 155 (323)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeecccee
Confidence 999999999986553 6899999999999999999999 889999999999999999999999999999765
No 132
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.93 E-value=3.6e-25 Score=223.96 Aligned_cols=148 Identities=28% Similarity=0.411 Sum_probs=133.0
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 568 (646)
++|+..+.||+|+||+||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57889999999999999999975 68999999997553 2334678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 569 YKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|+++ ++.+++......+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+|+...
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 152 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFG 152 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecC
Confidence 9975 777777766668999999999999999999999 8899999999999999999999999999998653
No 133
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.93 E-value=1.4e-25 Score=230.65 Aligned_cols=147 Identities=26% Similarity=0.393 Sum_probs=125.5
Q ss_pred CCCCcceeecccccceEEEEEe----CCCcEEEEEEEeccC----CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCee
Q 046544 492 NGFSENNLIGRGGFGSVYKARL----GDGMEVAVKVFNLQC----GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFK 563 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~ 563 (646)
++|+..+.||+|+||.||+|+. .+|+.||+|+++... ......+.+|+++++.++||||+++++++...+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 6789999999999999999986 478999999987542 22345678899999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 564 ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 564 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
|+||||++||+|.+++...+ .+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+|+..
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 97 YLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 99999999999999997654 5788999999999999999999 889999999999999999999999999998764
No 134
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.93 E-value=6e-27 Score=244.54 Aligned_cols=112 Identities=22% Similarity=0.256 Sum_probs=56.4
Q ss_pred CCcEEEecCCcccccCCcccc----CC-CCCceeecCCCcccc-----ccccccc-ccccccccCCCCcccCCCC----C
Q 046544 235 ELYELELGGNKLFGSIPACFS----NL-ASLRILSLSSNELTS-----IPLTFWN-LKDILQLNFSSNFLTGPLP----L 299 (646)
Q Consensus 235 ~L~~L~L~~N~i~~~~~~~~~----~l-~~L~~L~L~~N~l~~-----lp~~~~~-l~~L~~L~l~~N~l~~~~~----~ 299 (646)
+|++|+|++|++++..+..+. .+ ++|++|+|++|.|+. ++..+.. .++|+.|++++|.+++..+ .
T Consensus 168 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 247 (362)
T 3goz_A 168 NVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKL 247 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHH
T ss_pred cccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHH
Confidence 455555555555443332222 22 355555555555554 3333333 2345555555555543322 2
Q ss_pred ccCccccceEEEcccccccccCc-------cccCCCCCCCEEEccCccCCCccc
Q 046544 300 EIGNLKVLIGIDFSMNNFSSVIP-------TEIGGLKNLEYLFLGYNRLEGSIP 346 (646)
Q Consensus 300 ~~~~l~~L~~L~ls~N~l~~~~~-------~~~~~l~~L~~L~Ls~N~l~~~~p 346 (646)
.+..+++|+.|++++|.+.++.+ ..+..+++|+.|++++|++.+..+
T Consensus 248 ~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 248 LKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp TTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred HHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 33455666666666666443322 345566667777777777665433
No 135
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.93 E-value=1.5e-25 Score=226.25 Aligned_cols=147 Identities=26% Similarity=0.407 Sum_probs=133.8
Q ss_pred CCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCC--chHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEe
Q 046544 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCG--RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 569 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 569 (646)
++|+..+.||+|+||.||+|+..+|+.||+|++..... ...+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57889999999999999999988899999999875432 2346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 570 KPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 570 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
+++ +|.+++......+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||+|+..
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 150 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAF 150 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHH
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECcccccc
Confidence 975 999999877667899999999999999999999 889999999999999999999999999998764
No 136
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=3.3e-28 Score=271.65 Aligned_cols=378 Identities=16% Similarity=0.151 Sum_probs=254.4
Q ss_pred ccCCCCCCEEECCCCccc---ccCCcC------------ccCCCCCCEEECcCCcCcccCCc-cCcCCCCCCCEEEccCC
Q 046544 6 ISNLQNLEELDLRHNKLV---GTVPAA------------IFNMSMLKLLHLQNNSLLGCLSS-IADVRLPNLEALLLWGN 69 (646)
Q Consensus 6 ~~~l~~L~~L~L~~N~l~---~~~~~~------------~~~l~~L~~L~L~~N~l~~~~~~-~~~~~l~~L~~L~L~~N 69 (646)
+..+++|++|+|++|.-. +..|.. +..+++|++|+|++|.+++.... +. ..+++|++|+|++|
T Consensus 62 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~-~~~~~L~~L~L~~~ 140 (594)
T 2p1m_B 62 IRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIA-KSFKNFKVLVLSSC 140 (594)
T ss_dssp HHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHH-HHCTTCCEEEEESC
T ss_pred HhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHH-HhCCCCcEEeCCCc
Confidence 456788999999887622 122222 34678899999999887643222 21 13788999999988
Q ss_pred -ccccc-CCccccCCCCCcEEEcccCccccccCcccc----CcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEEC
Q 046544 70 -NFSGT-IPRFIFNASKLSILELSQNSFSGFIPNTFG----NLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHL 143 (646)
Q Consensus 70 -~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~----~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L 143 (646)
.++.. ++..+..+++|++|+|++|.+++..+..+. .+++|++|++++|. ..+.... +...+.++++|++|++
T Consensus 141 ~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~-l~~l~~~~~~L~~L~L 218 (594)
T 2p1m_B 141 EGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSA-LERLVTRCPNLKSLKL 218 (594)
T ss_dssp EEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHH-HHHHHHHCTTCCEEEC
T ss_pred CCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHH-HHHHHHhCCCCcEEec
Confidence 55532 444555788999999999988765554443 56689999998887 2221110 1112345688889998
Q ss_pred CCC-CCCCcCCcchhccccccCcEEEeeccc--------------------------cc----ccCCcccccCCCCCEEE
Q 046544 144 SDN-PLDGILSKTSIGNLSHSLKDFYMSNCN--------------------------VS----GGIPEEITNLTNSITID 192 (646)
Q Consensus 144 s~N-~l~~~~~~~~~~~~~~~L~~L~L~~n~--------------------------l~----~~~p~~~~~l~~L~~L~ 192 (646)
++| .+.++ ...+. -.++|++|+++.+. +. +.+|..+..+++|++|+
T Consensus 219 ~~~~~~~~l--~~~~~-~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~ 295 (594)
T 2p1m_B 219 NRAVPLEKL--ATLLQ-RAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLN 295 (594)
T ss_dssp CTTSCHHHH--HHHHH-HCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEE
T ss_pred CCCCcHHHH--HHHHh-cCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEE
Confidence 888 22221 11111 12456666654431 11 12344445779999999
Q ss_pred ccCCccccccC-ccccCCCCCCeEEeecccccCc-CchhhcCCCCCcEEEecC---------CcccccCCccc-cCCCCC
Q 046544 193 LGGNKLNGSIP-ITLSKLQKLQGLGLDDNKLEGS-IPDSICRLTELYELELGG---------NKLFGSIPACF-SNLASL 260 (646)
Q Consensus 193 L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~---------N~i~~~~~~~~-~~l~~L 260 (646)
+++|.+++... ..+..+++|++|++++| +... .+.....+++|++|++++ +.+++.....+ .++++|
T Consensus 296 L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L 374 (594)
T 2p1m_B 296 LSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKL 374 (594)
T ss_dssp CTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTC
T ss_pred ccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhH
Confidence 99999775433 33568899999999998 4422 233334589999999943 55554333333 348899
Q ss_pred ceeecCCCccccc-ccccc-cccccccccCC--C----CcccCCCC-----CccCccccceEEEcccccccccCccccCC
Q 046544 261 RILSLSSNELTSI-PLTFW-NLKDILQLNFS--S----NFLTGPLP-----LEIGNLKVLIGIDFSMNNFSSVIPTEIGG 327 (646)
Q Consensus 261 ~~L~L~~N~l~~l-p~~~~-~l~~L~~L~l~--~----N~l~~~~~-----~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 327 (646)
+.|+++.|.++.. +..+. .+++|+.|+++ + |.+++... ..+..+++|+.|++++ .+++..+..++.
T Consensus 375 ~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~ 453 (594)
T 2p1m_B 375 ESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGT 453 (594)
T ss_dssp CEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHH
T ss_pred HHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHH
Confidence 9999999998843 23333 57899999998 4 55553211 1256788999999987 677665555555
Q ss_pred -CCCCCEEEccCccCCCcccccc-cCCCCCCEEEccCCcCcccCCc-cccCCCCCCceeCcCCccee
Q 046544 328 -LKNLEYLFLGYNRLEGSIPDSF-GDLISLKFLNLSNNNLSGAIPT-SLEKLSYLEDLNLSFNKLEG 391 (646)
Q Consensus 328 -l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~ 391 (646)
+++|+.|+|++|.+++..+..+ ..+++|++|+|++|.+++..+. ....+++|++|++++|+++.
T Consensus 454 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 454 YAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp HCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred hchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 8899999999999987666555 6789999999999999755443 44568999999999999853
No 137
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.92 E-value=9.2e-25 Score=222.60 Aligned_cols=161 Identities=35% Similarity=0.531 Sum_probs=144.2
Q ss_pred cccccHHHHHHHhCCCCcc------eeecccccceEEEEEeCCCcEEEEEEEeccC----CchHHHHHHHHHHHHhCCCC
Q 046544 479 WRTFSYLELCRATNGFSEN------NLIGRGGFGSVYKARLGDGMEVAVKVFNLQC----GRAFKSFAVECEMMKSIRHR 548 (646)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~H~ 548 (646)
...+++.++..++++|... +.||+|+||.||+|+. +++.||+|++.... ....+.+.+|+++++.++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4678899999999998877 8999999999999987 68899999987532 23456789999999999999
Q ss_pred CceeEEEEEecCCeeEEEEEecCCCCHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEc
Q 046544 549 NLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSS--NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLD 626 (646)
Q Consensus 549 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~ 626 (646)
||+++++++...+..++||||+++|+|.+++... ...+++..+..++.|++.|++||| ..+|+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEc
Confidence 9999999999999999999999999999998643 346899999999999999999999 88999999999999999
Q ss_pred CCCcEEEEeecCccccc
Q 046544 627 DNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 627 ~~~~~ki~DfGla~~~~ 643 (646)
.++.+||+|||+|+...
T Consensus 168 ~~~~~kl~Dfg~~~~~~ 184 (307)
T 2nru_A 168 EAFTAKISDFGLARASE 184 (307)
T ss_dssp TTCCEEECCCTTCEECC
T ss_pred CCCcEEEeecccccccc
Confidence 99999999999987653
No 138
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.92 E-value=2.3e-25 Score=230.89 Aligned_cols=149 Identities=23% Similarity=0.257 Sum_probs=133.6
Q ss_pred HhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhC-CCCCceeEEEEEecCCeeE
Q 046544 490 ATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSI-RHRNLIKVISSCSNEEFKA 564 (646)
Q Consensus 490 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~~~~ 564 (646)
..++|+..+.||+|+||+||+|+.. +|+.||+|++.... ....+.+.+|..+++.+ +||+|+++++++...+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3468999999999999999999976 58899999997542 23456778899999988 8999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 565 LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
+||||++||+|.+++...+ .+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+|+..
T Consensus 98 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 9999999999999997654 5899999999999999999999 889999999999999999999999999999864
No 139
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.92 E-value=2.1e-25 Score=227.43 Aligned_cols=148 Identities=32% Similarity=0.520 Sum_probs=129.2
Q ss_pred hCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 568 (646)
..+|+..+.||+|+||.||+|+. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 35788899999999999999987 68899999987554 2334678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 569 YKPHGSLEKYLYSSNC--ILDIFQRLNIMIDVASALEYLHFGCLAP--VIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~~~~--iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
|+++|+|.+++..... .+++..+..++.|++.|++||| ..+ |+||||||+||+++.++.+||+|||+|+..
T Consensus 115 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 115 YLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp CCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred cCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 9999999999976542 3889999999999999999999 778 999999999999999999999999999754
No 140
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=1.5e-25 Score=228.76 Aligned_cols=200 Identities=19% Similarity=0.159 Sum_probs=113.7
Q ss_pred CCCCEEEccCCccccccCccc--cCCCCCCeEEeecccccCcCc----hhhcCCCCCcEEEecCCcccccCCccccCCCC
Q 046544 186 TNSITIDLGGNKLNGSIPITL--SKLQKLQGLGLDDNKLEGSIP----DSICRLTELYELELGGNKLFGSIPACFSNLAS 259 (646)
Q Consensus 186 ~~L~~L~L~~N~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 259 (646)
++|++|++++|.+.+..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++.+..+..|+++++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 345555555555554544444 455555555555555554332 23334555555555555555555555555555
Q ss_pred CceeecCCCcccc---ccc--ccccccccccccCCCCcccCCCCC----ccCccccceEEEcccccccccCccccCCC--
Q 046544 260 LRILSLSSNELTS---IPL--TFWNLKDILQLNFSSNFLTGPLPL----EIGNLKVLIGIDFSMNNFSSVIPTEIGGL-- 328 (646)
Q Consensus 260 L~~L~L~~N~l~~---lp~--~~~~l~~L~~L~l~~N~l~~~~~~----~~~~l~~L~~L~ls~N~l~~~~~~~~~~l-- 328 (646)
|++|+|++|++.. ++. .+..+++|++|++++|.++. ++. .++.+++|+.|++++|.+++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 5555555555432 221 12345555555555555542 111 23455666666666666666655555554
Q ss_pred -CCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCccee
Q 046544 329 -KNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEG 391 (646)
Q Consensus 329 -~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 391 (646)
++|++|+|++|+++ .+|..+. ++|++|||++|+|++. |. +..+++|+.|+|++|+++.
T Consensus 250 ~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 250 SSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred cCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 57777777777777 4555553 6788888888888743 33 5677788888888887763
No 141
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.92 E-value=5e-25 Score=224.43 Aligned_cols=193 Identities=26% Similarity=0.369 Sum_probs=104.3
Q ss_pred cCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCcee
Q 046544 184 NLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRIL 263 (646)
Q Consensus 184 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 263 (646)
.+++|+.|++++|.+... | .+..+++|++|++++|.+++..+ +..+++|++|+|++|++++. ..+..+++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L 112 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTL 112 (308)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEE
T ss_pred HcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEE
Confidence 344455555555555432 2 34445555555555555553322 55555555555555555432 235555555555
Q ss_pred ecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCC
Q 046544 264 SLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEG 343 (646)
Q Consensus 264 ~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 343 (646)
++++|.++.+|. +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++
T Consensus 113 ~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 113 DLTSTQITDVTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp ECTTSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred ECCCCCCCCchh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc
Confidence 555555555443 4455555555555555554332 5555666666666666654433 5666666666666666664
Q ss_pred cccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCccee
Q 046544 344 SIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEG 391 (646)
Q Consensus 344 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 391 (646)
..+ +..+++|+.|+|++|++++..| +..+++|+.|++++|++++
T Consensus 188 ~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 188 ISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred Chh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 433 5666666666666666664332 5666666666666666655
No 142
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.92 E-value=2.7e-25 Score=232.61 Aligned_cols=146 Identities=25% Similarity=0.423 Sum_probs=127.6
Q ss_pred CcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEecCCC
Q 046544 495 SENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHG 573 (646)
Q Consensus 495 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~g 573 (646)
...+.||+|+||.||+|+.. +|+.||+|++........+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 33578999999999999864 69999999998766556678999999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEE--cCCCcEEEEeecCccccc
Q 046544 574 SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL--DDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 574 ~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~--~~~~~~ki~DfGla~~~~ 643 (646)
+|.+++......+++..+..++.|++.||+||| ..+|+||||||+||++ +.++.+||+|||+|+.+.
T Consensus 172 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~ 240 (373)
T 2x4f_A 172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYK 240 (373)
T ss_dssp EEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECC
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecC
Confidence 999999876667899999999999999999999 8899999999999999 567899999999998764
No 143
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=1.2e-27 Score=267.06 Aligned_cols=393 Identities=13% Similarity=0.123 Sum_probs=278.6
Q ss_pred CEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCC---c-c----------CcCCCCCCCEEEccCCcccccCCcc
Q 046544 13 EELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLS---S-I----------ADVRLPNLEALLLWGNNFSGTIPRF 78 (646)
Q Consensus 13 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~---~-~----------~~~~l~~L~~L~L~~N~l~~~~~~~ 78 (646)
..+++++..-. ..+..+..+++|++|+|++|....... . + ....+++|++|+|++|.+++..+..
T Consensus 46 ~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~ 124 (594)
T 2p1m_B 46 RKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLEL 124 (594)
T ss_dssp CEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHH
T ss_pred eEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHH
Confidence 45666555432 334567788999999999986322111 0 0 0124789999999999999877777
Q ss_pred cc-CCCCCcEEEcccC-ccccc-cCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcc
Q 046544 79 IF-NASKLSILELSQN-SFSGF-IPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKT 155 (646)
Q Consensus 79 ~~-~l~~L~~L~Ls~N-~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~ 155 (646)
+. .+++|++|+|++| .++.. .+..+.++++|++|+|++|.++...... +......+++|++|++++|. ..+ ...
T Consensus 125 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~-l~~~~~~~~~L~~L~l~~~~-~~~-~~~ 201 (594)
T 2p1m_B 125 IAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHW-LSHFPDTYTSLVSLNISCLA-SEV-SFS 201 (594)
T ss_dssp HHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGG-GGGSCTTCCCCCEEECTTCC-SCC-CHH
T ss_pred HHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHH-HHHHhhcCCcCcEEEecccC-CcC-CHH
Confidence 75 6899999999999 56543 3444568999999999999987754332 22334578999999999997 222 111
Q ss_pred hhc---cccccCcEEEeecc-cccccCCcccccCCCCCEEEccCCc--------------------------ccc----c
Q 046544 156 SIG---NLSHSLKDFYMSNC-NVSGGIPEEITNLTNSITIDLGGNK--------------------------LNG----S 201 (646)
Q Consensus 156 ~~~---~~~~~L~~L~L~~n-~l~~~~p~~~~~l~~L~~L~L~~N~--------------------------l~~----~ 201 (646)
.+. .-.++|+.|++++| .+.+ +|..+..+++|+.|+++.+. +.. .
T Consensus 202 ~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~ 280 (594)
T 2p1m_B 202 ALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAY 280 (594)
T ss_dssp HHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGG
T ss_pred HHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhh
Confidence 221 11468999999999 4444 77888888999999866552 111 1
Q ss_pred cCccccCCCCCCeEEeecccccCcCc-hhhcCCCCCcEEEecCCccccc-CCccccCCCCCceeecC---------CCcc
Q 046544 202 IPITLSKLQKLQGLGLDDNKLEGSIP-DSICRLTELYELELGGNKLFGS-IPACFSNLASLRILSLS---------SNEL 270 (646)
Q Consensus 202 ~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~L~---------~N~l 270 (646)
.+..+..+++|++|++++|.+++... ..+..+++|++|++++| +... .+.....+++|+.|+++ .+.+
T Consensus 281 l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l 359 (594)
T 2p1m_B 281 LPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVAL 359 (594)
T ss_dssp GGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCC
T ss_pred HHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCC
Confidence 23333467899999999999775432 33568999999999999 5422 23334468999999994 3455
Q ss_pred cccc-ccc-ccccccccccCCCCcccCCCCCccC-ccccceEEEcc--c----ccccccC-----ccccCCCCCCCEEEc
Q 046544 271 TSIP-LTF-WNLKDILQLNFSSNFLTGPLPLEIG-NLKVLIGIDFS--M----NNFSSVI-----PTEIGGLKNLEYLFL 336 (646)
Q Consensus 271 ~~lp-~~~-~~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~ls--~----N~l~~~~-----~~~~~~l~~L~~L~L 336 (646)
+... ..+ ..+++|+.|+++.|.+++..+..+. .+++|+.|+++ + |.+++.. +..+..+++|+.|++
T Consensus 360 ~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L 439 (594)
T 2p1m_B 360 TEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSL 439 (594)
T ss_dssp CHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEEC
T ss_pred CHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEee
Confidence 5321 122 3478999999988988765555554 58899999999 4 5666322 223667899999999
Q ss_pred cCccCCCcccccccC-CCCCCEEEccCCcCcccCCccc-cCCCCCCceeCcCCcceeeccC-C-CCCCCCccccccCCcc
Q 046544 337 GYNRLEGSIPDSFGD-LISLKFLNLSNNNLSGAIPTSL-EKLSYLEDLNLSFNKLEGEIPR-G-GSFGNFAAESFEGNEL 412 (646)
Q Consensus 337 s~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~-~-~~~~~~~~~~~~~N~~ 412 (646)
++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|++|++++|++++..+. . ..+++++.+++++|+.
T Consensus 440 ~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 440 SG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp CS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred cC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 88 777666666665 8999999999999987655555 6799999999999999654332 2 3367899999998864
No 144
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.92 E-value=6.9e-25 Score=225.43 Aligned_cols=148 Identities=26% Similarity=0.385 Sum_probs=133.5
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC------chHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG------RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKA 564 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~ 564 (646)
++|...+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|+.+++.++||||+++++++...+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46888999999999999999975 689999999975432 23567899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCC----cEEEEeecCcc
Q 046544 565 LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNL----VAYLSDFGIAK 640 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~----~~ki~DfGla~ 640 (646)
+||||+++|+|.+++.... .+++..+..++.|++.|++||| ..+|+||||||+||+++.++ .+||+|||+|+
T Consensus 91 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 9999999999999997643 6899999999999999999999 88999999999999998877 89999999998
Q ss_pred ccc
Q 046544 641 LLI 643 (646)
Q Consensus 641 ~~~ 643 (646)
.+.
T Consensus 167 ~~~ 169 (326)
T 2y0a_A 167 KID 169 (326)
T ss_dssp ECC
T ss_pred ECC
Confidence 763
No 145
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.92 E-value=2.8e-25 Score=225.47 Aligned_cols=148 Identities=25% Similarity=0.371 Sum_probs=127.3
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC--------------------------chHHHHHHHHHHHH
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG--------------------------RAFKSFAVECEMMK 543 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l~ 543 (646)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 468999999999999999999864 689999999875421 12356889999999
Q ss_pred hCCCCCceeEEEEEec--CCeeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCC
Q 046544 544 SIRHRNLIKVISSCSN--EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPD 621 (646)
Q Consensus 544 ~l~H~niv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~ 621 (646)
.++||||+++++++.. .+..++||||+++|+|.++... ..+++..+..++.|++.||+||| ..+|+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHH
Confidence 9999999999999987 5678999999999999887543 36899999999999999999999 889999999999
Q ss_pred CEEEcCCCcEEEEeecCccccc
Q 046544 622 NVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 622 Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||+++.++.+||+|||+|+.+.
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~ 188 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFK 188 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECS
T ss_pred HEEECCCCCEEEecCCCccccc
Confidence 9999999999999999998764
No 146
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.92 E-value=4.1e-25 Score=235.89 Aligned_cols=151 Identities=23% Similarity=0.346 Sum_probs=133.3
Q ss_pred HhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC--chHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEE
Q 046544 490 ATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG--RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALV 566 (646)
Q Consensus 490 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv 566 (646)
..++|+..+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+++++.++||||+++++++..++..|+|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 3467899999999999999999864 799999999986542 3446788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEc---CCCcEEEEeecCccccc
Q 046544 567 LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLD---DNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~---~~~~~ki~DfGla~~~~ 643 (646)
|||++||+|.+++...+ .+++..+..++.|++.|++||| .++|+||||||+||+++ .++.+||+|||+|+.+.
T Consensus 89 ~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp ECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 99999999999998764 6899999999999999999999 88999999999999998 46789999999998764
Q ss_pred C
Q 046544 644 G 644 (646)
Q Consensus 644 ~ 644 (646)
+
T Consensus 165 ~ 165 (444)
T 3soa_A 165 G 165 (444)
T ss_dssp T
T ss_pred C
Confidence 3
No 147
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.92 E-value=4.3e-25 Score=230.19 Aligned_cols=149 Identities=23% Similarity=0.458 Sum_probs=133.4
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
.++|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++..++..|+||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999865 68999999998653 234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCC---CcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDN---LVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~---~~~ki~DfGla~~~~ 643 (646)
||++||+|.+++.... .+++..+..++.|++.|++||| ..+|+||||||+||+++.+ +.+||+|||+|+...
T Consensus 108 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 108 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp CCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 9999999999987654 6899999999999999999999 8899999999999999754 469999999998764
No 148
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.92 E-value=5.6e-25 Score=228.41 Aligned_cols=241 Identities=17% Similarity=0.139 Sum_probs=147.4
Q ss_pred CEEEccCCcccccCCccccCCCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEE
Q 046544 62 EALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFI 141 (646)
Q Consensus 62 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L 141 (646)
++++.++|+++ .+|..+ .+++++|+|++|+|+.+.+++|.++++|++|+|++|++.+.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~------------------- 69 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEV------------------- 69 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCE-------------------
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCc-------------------
Confidence 34555566665 344433 24566666666666655555666666666666666655331
Q ss_pred ECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCE-EEccCCccccccCccccCCCCCCeEEeecc
Q 046544 142 HLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSIT-IDLGGNKLNGSIPITLSKLQKLQGLGLDDN 220 (646)
Q Consensus 142 ~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~-L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 220 (646)
+.+.+|.+++++.. +++++|++..+.|.+|.++++|++|++++|
T Consensus 70 -----------------------------------i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n 114 (350)
T 4ay9_X 70 -----------------------------------IEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNT 114 (350)
T ss_dssp -----------------------------------ECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEE
T ss_pred -----------------------------------cChhHhhcchhhhhhhcccCCcccccCchhhhhcccccccccccc
Confidence 11233444444443 444556666666667777777777777777
Q ss_pred cccCcCchhhcCCCCCcEEEecC-CcccccCCccccCCC-CCceeecCCCcccccccccccccccccccCCC-CcccCCC
Q 046544 221 KLEGSIPDSICRLTELYELELGG-NKLFGSIPACFSNLA-SLRILSLSSNELTSIPLTFWNLKDILQLNFSS-NFLTGPL 297 (646)
Q Consensus 221 ~l~~~~~~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~l~-~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~-N~l~~~~ 297 (646)
+|+...+..+....++..|++.+ |++..+.+..|..+. .++.|+|++|+|+++|...+...+|+.+++++ |.++.+.
T Consensus 115 ~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~ 194 (350)
T 4ay9_X 115 GIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELP 194 (350)
T ss_dssp CCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCC
T ss_pred ccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCcccCCC
Confidence 77766666666666777777754 566666666777664 57778888888888877666666777777764 5565544
Q ss_pred CCccCccccceEEEcccccccccCccccCCCCCCCEEEccCc-cCCCcccccccCCCCCCEEEccCCc
Q 046544 298 PLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYN-RLEGSIPDSFGDLISLKFLNLSNNN 364 (646)
Q Consensus 298 ~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~ 364 (646)
+..|..+++|+.||+++|+|+.+.+..|. +|+.|.+.++ .++ .+| .+..+++|+.++++++.
T Consensus 195 ~~~f~~l~~L~~LdLs~N~l~~lp~~~~~---~L~~L~~l~~~~l~-~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 195 NDVFHGASGPVILDISRTRIHSLPSYGLE---NLKKLRARSTYNLK-KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp TTTTTTEECCSEEECTTSCCCCCCSSSCT---TCCEEECTTCTTCC-CCC-CTTTCCSCCEEECSCHH
T ss_pred HHHhccCcccchhhcCCCCcCccChhhhc---cchHhhhccCCCcC-cCC-CchhCcChhhCcCCCCc
Confidence 55667777777777777777765544443 4444444333 333 344 36667777777776553
No 149
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.92 E-value=2.6e-25 Score=228.27 Aligned_cols=145 Identities=30% Similarity=0.426 Sum_probs=128.5
Q ss_pred CCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCC----eeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEE----FKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~----~~~lv~ 567 (646)
++|+..+.||+|+||+||+|++. ++.||||++.... .....+.+|+.++++++||||+++++++.... ..++||
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 67899999999999999999875 7899999997543 23345567899999999999999999998753 469999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC----------CeEecCCCCCCEEEcCCCcEEEEeec
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA----------PVIHCDLKPDNVLLDDNLVAYLSDFG 637 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~----------~iiHrdlk~~Nil~~~~~~~ki~DfG 637 (646)
||+++|+|.+++... .+++..+..++.|++.|++||| .. +|+||||||+||+++.++.+||+|||
T Consensus 102 e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg 176 (322)
T 3soc_A 102 AFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176 (322)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence 999999999999775 4899999999999999999999 77 99999999999999999999999999
Q ss_pred Cccccc
Q 046544 638 IAKLLI 643 (646)
Q Consensus 638 la~~~~ 643 (646)
+|+.+.
T Consensus 177 ~a~~~~ 182 (322)
T 3soc_A 177 LALKFE 182 (322)
T ss_dssp TCEEEC
T ss_pred cccccc
Confidence 997653
No 150
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.92 E-value=4.1e-25 Score=237.49 Aligned_cols=148 Identities=30% Similarity=0.468 Sum_probs=134.7
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..|+||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57889999999999999999975 79999999997542 233467889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||++||+|.+++...+ .+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+...
T Consensus 96 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 96 EYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp ECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 9999999999997643 6899999999999999999999 8999999999999999999999999999998764
No 151
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.92 E-value=2.5e-25 Score=229.09 Aligned_cols=148 Identities=28% Similarity=0.451 Sum_probs=132.6
Q ss_pred hCCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALV 566 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv 566 (646)
.++|...+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|+++++.++||||+++++++..++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 36799999999999999999996 578999999987532 22335788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 567 LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|||+ +|++.+++...+ .+++.++..++.|++.|++||| ..+|+||||||+||++++++.+||+|||+|+...
T Consensus 88 ~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp ECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 9999 779999887654 6899999999999999999999 8899999999999999999999999999998654
No 152
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.92 E-value=4.8e-25 Score=226.01 Aligned_cols=150 Identities=28% Similarity=0.426 Sum_probs=132.4
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecCC--eeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEE--FKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~--~~~lv~ 567 (646)
++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 56889999999999999999975 58999999997543 234567889999999999999999999988765 789999
Q ss_pred EecCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEE----cCCCcEEEEeecCccc
Q 046544 568 EYKPHGSLEKYLYSSN--CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL----DDNLVAYLSDFGIAKL 641 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~----~~~~~~ki~DfGla~~ 641 (646)
||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||++ +.++.+||+|||+|+.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 9999999999997643 23899999999999999999999 8899999999999999 7788899999999987
Q ss_pred ccC
Q 046544 642 LIG 644 (646)
Q Consensus 642 ~~~ 644 (646)
+..
T Consensus 166 ~~~ 168 (319)
T 4euu_A 166 LED 168 (319)
T ss_dssp CCT
T ss_pred cCC
Confidence 643
No 153
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.92 E-value=3.1e-25 Score=224.04 Aligned_cols=149 Identities=27% Similarity=0.411 Sum_probs=134.8
Q ss_pred CCCCcceeecccccceEEEEEeC-CC-------cEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCee
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DG-------MEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFK 563 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~ 563 (646)
++|+..+.||+|+||.||+|+.. ++ ..||+|++........+.+.+|+++++.++||||+++++++..++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 57888999999999999999854 33 57999999776666678899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCc--------EEEEe
Q 046544 564 ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLV--------AYLSD 635 (646)
Q Consensus 564 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~--------~ki~D 635 (646)
++||||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeecc
Confidence 9999999999999999887666899999999999999999999 889999999999999988776 99999
Q ss_pred ecCccccc
Q 046544 636 FGIAKLLI 643 (646)
Q Consensus 636 fGla~~~~ 643 (646)
||+++...
T Consensus 165 fg~~~~~~ 172 (289)
T 4fvq_A 165 PGISITVL 172 (289)
T ss_dssp CCSCTTTS
T ss_pred Cccccccc
Confidence 99997653
No 154
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.92 E-value=5.3e-25 Score=239.91 Aligned_cols=149 Identities=24% Similarity=0.369 Sum_probs=134.4
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
++|+..+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+++++.++||||+++++++.+.+..|+||
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 263 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence 56888999999999999999975 79999999997542 233466789999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||++||+|.+++...+ ..+++..+..++.||+.||+||| ..+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 264 Ey~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 264 TLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp CCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 9999999999987654 34899999999999999999999 8899999999999999999999999999998764
No 155
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=9.9e-25 Score=213.85 Aligned_cols=197 Identities=20% Similarity=0.191 Sum_probs=159.7
Q ss_pred ccCcEEEeecccccccCCcccccCCCCCEEEccCCc-cccccCccccCCCCCCeEEeec-ccccCcCchhhcCCCCCcEE
Q 046544 162 HSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNK-LNGSIPITLSKLQKLQGLGLDD-NKLEGSIPDSICRLTELYEL 239 (646)
Q Consensus 162 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L 239 (646)
.++++|++++|++++..+..|.++++|++|++++|+ ++++.+..|.++++|++|++++ |++++..+.+|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 467777777777777777788888888888888886 8877777888888888888888 88887777788888888888
Q ss_pred EecCCcccccCCccccCCCCCc---eeecCCC-ccccccc-ccccccccc-cccCCCCcccCCCCCccCccccceEEEcc
Q 046544 240 ELGGNKLFGSIPACFSNLASLR---ILSLSSN-ELTSIPL-TFWNLKDIL-QLNFSSNFLTGPLPLEIGNLKVLIGIDFS 313 (646)
Q Consensus 240 ~L~~N~i~~~~~~~~~~l~~L~---~L~L~~N-~l~~lp~-~~~~l~~L~-~L~l~~N~l~~~~~~~~~~l~~L~~L~ls 313 (646)
++++|++++ +|. |..+++|+ +|++++| .++.+|. .|.++++|+ .|++++|.++...+..|.. ++|+.|+++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcC
Confidence 888888876 454 77888887 8888888 8888876 477788888 8888888888544455555 889999999
Q ss_pred ccc-ccccCccccCCC-CCCCEEEccCccCCCcccccccCCCCCCEEEccCCc
Q 046544 314 MNN-FSSVIPTEIGGL-KNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNN 364 (646)
Q Consensus 314 ~N~-l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 364 (646)
+|. ++++.+..|.++ ++|+.|++++|++++..+. .+++|+.|+++++.
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNTW 237 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC-
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCcc
Confidence 994 998888889999 9999999999999855444 57789999998873
No 156
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.92 E-value=5.9e-25 Score=219.21 Aligned_cols=147 Identities=29% Similarity=0.444 Sum_probs=136.0
Q ss_pred CCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEecC
Q 046544 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKP 571 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 571 (646)
++|+..+.||+|+||.||+|+..+++.||+|++..... ..+.+.+|+++++.++||||+++++++..++..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 57888999999999999999988889999999976543 34678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 572 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 572 ~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
+++|.+++......+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 154 (267)
T 3t9t_A 87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFV 154 (267)
T ss_dssp TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGB
T ss_pred CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccc
Confidence 99999999887667899999999999999999999 889999999999999999999999999999865
No 157
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.92 E-value=5.8e-25 Score=225.16 Aligned_cols=149 Identities=26% Similarity=0.420 Sum_probs=119.1
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 568 (646)
.++|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467999999999999999999864 68999999997654 2334678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 569 YKPHGSLEKYLYSSN-----CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|++ |+|.+++.... ..+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999886532 35889999999999999999999 8899999999999999999999999999998653
No 158
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.92 E-value=5.7e-25 Score=223.56 Aligned_cols=149 Identities=27% Similarity=0.501 Sum_probs=131.2
Q ss_pred CCCCcceeecccccceEEEEEe-----CCCcEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecC--Cee
Q 046544 492 NGFSENNLIGRGGFGSVYKARL-----GDGMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNE--EFK 563 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~--~~~ 563 (646)
..|+..+.||+|+||.||+|++ .+++.||+|++.... ....+.+.+|+++++.++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4578899999999999999983 368999999987543 33457789999999999999999999999877 668
Q ss_pred EEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 564 ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 564 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
++||||+++|+|.+++......+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999999776667899999999999999999999 8899999999999999999999999999998764
No 159
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.92 E-value=3.6e-25 Score=229.96 Aligned_cols=149 Identities=23% Similarity=0.356 Sum_probs=131.2
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC-----CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-----GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKAL 565 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~l 565 (646)
++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++..++..|+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 56899999999999999999865 68999999987431 2245778999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCc---EEEEeecCc
Q 046544 566 VLEYKPHGSLEKYLYSS---NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLV---AYLSDFGIA 639 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~---~ki~DfGla 639 (646)
|||||+||+|.+++... +..+++..+..++.|++.||+||| .++|+||||||+||+++.++. +||+|||+|
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 99999999998887543 335899999999999999999999 889999999999999976554 999999999
Q ss_pred cccc
Q 046544 640 KLLI 643 (646)
Q Consensus 640 ~~~~ 643 (646)
+.+.
T Consensus 181 ~~~~ 184 (351)
T 3c0i_A 181 IQLG 184 (351)
T ss_dssp EECC
T ss_pred eEec
Confidence 8764
No 160
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.92 E-value=2e-25 Score=232.80 Aligned_cols=160 Identities=24% Similarity=0.419 Sum_probs=137.9
Q ss_pred cccHHHHHHHhCCCCcceeecccccceEEEEEe------CCCcEEEEEEEeccCC-chHHHHHHHHHHHHhC-CCCCcee
Q 046544 481 TFSYLELCRATNGFSENNLIGRGGFGSVYKARL------GDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRNLIK 552 (646)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~H~niv~ 552 (646)
.+...++....++|+..+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|+++++++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 444556666678999999999999999999973 2468899999976543 3446789999999999 8999999
Q ss_pred EEEEEecCC-eeEEEEEecCCCCHHHHHhhCCC-----------------------------------------------
Q 046544 553 VISSCSNEE-FKALVLEYKPHGSLEKYLYSSNC----------------------------------------------- 584 (646)
Q Consensus 553 ~~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~----------------------------------------------- 584 (646)
+++++...+ ..++||||+++|+|.+++.....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999998765 48999999999999999976532
Q ss_pred ------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 585 ------------------ILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 585 ------------------~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
.+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 244 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 244 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeec
Confidence 1788999999999999999999 8899999999999999999999999999998653
No 161
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.92 E-value=8.1e-25 Score=219.53 Aligned_cols=149 Identities=30% Similarity=0.383 Sum_probs=135.6
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEe
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 569 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 569 (646)
.++|+..+.||+|+||.||+|+.. +++.||+|.+........+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 357889999999999999999865 5789999999876656678899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEE---cCCCcEEEEeecCccccc
Q 046544 570 KPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 570 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~---~~~~~~ki~DfGla~~~~ 643 (646)
+++++|.+++...+ .+++..+..++.|++.|++||| +.+|+||||||+||++ +.++.+||+|||+|+.+.
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 88 CTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp CCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 99999999987654 5899999999999999999999 8899999999999999 788999999999998654
No 162
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.92 E-value=5.7e-25 Score=226.64 Aligned_cols=146 Identities=25% Similarity=0.323 Sum_probs=132.1
Q ss_pred CCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccCCchHHHHHHHHHHHHhC-CCCCceeEEEEEecCCeeEEEEEe
Q 046544 492 NGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI-RHRNLIKVISSCSNEEFKALVLEY 569 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~ 569 (646)
++|+..+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|+++++.+ +||||+++++++...+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 6789999999999999999996 5799999999875532 24578899999999 999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCc-----EEEEeecCccccc
Q 046544 570 KPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLV-----AYLSDFGIAKLLI 643 (646)
Q Consensus 570 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~-----~ki~DfGla~~~~ 643 (646)
+ +++|.+++...+..+++..+..++.|++.||+||| ..+|+||||||+||+++.++. +||+|||+|+.+.
T Consensus 87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 87 L-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 9 99999999876668999999999999999999999 889999999999999998887 9999999998764
No 163
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.92 E-value=6.8e-25 Score=228.66 Aligned_cols=147 Identities=24% Similarity=0.298 Sum_probs=130.6
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEe
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 569 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 569 (646)
.++|+..+.||+|+||.||+|+.. +++.||+|++..... ..+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 367999999999999999999975 789999999975432 236688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCc--EEEEeecCcccc
Q 046544 570 KPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLV--AYLSDFGIAKLL 642 (646)
Q Consensus 570 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~--~ki~DfGla~~~ 642 (646)
+++|+|.+++...+ .+++..+..++.|++.|++||| .++|+||||||+||+++.++. +||+|||+|+..
T Consensus 98 ~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 98 ASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 99999999987654 5899999999999999999999 889999999999999987665 999999998743
No 164
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.92 E-value=4.1e-25 Score=240.07 Aligned_cols=149 Identities=28% Similarity=0.504 Sum_probs=135.1
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEec
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYK 570 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 570 (646)
.+|+..+.||+|+||.||+|++. ++..||||+++... ...+.|.+|++++++++||||+++++++...+..++||||+
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 56788899999999999999976 48899999987543 34578999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccccC
Q 046544 571 PHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644 (646)
Q Consensus 571 ~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~~ 644 (646)
++|+|.+++.... ..+++..+..++.|++.||+||| .++|+||||||+||+++.++.+||+|||+|+.+.+
T Consensus 299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 9999999998643 46889999999999999999999 88999999999999999999999999999987643
No 165
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.92 E-value=3.1e-25 Score=231.62 Aligned_cols=147 Identities=31% Similarity=0.387 Sum_probs=123.8
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHH-HHhCCCCCceeEEEEEecCCeeEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEM-MKSIRHRNLIKVISSCSNEEFKALV 566 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~-l~~l~H~niv~~~~~~~~~~~~~lv 566 (646)
++|+..+.||+|+||+||+|+.+ +++.||+|++.... ....+.+.+|..+ ++.++||||+++++++.+.+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 57899999999999999999975 68899999997653 2233456667776 5778999999999999999999999
Q ss_pred EEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 567 LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
|||++||+|.+++...+ .+++..+..++.||+.||+||| .++|+||||||+||+++.++.+||+|||+|+..
T Consensus 118 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 118 LDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 99999999999997654 6788999999999999999999 889999999999999999999999999999864
No 166
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.92 E-value=3.4e-25 Score=229.60 Aligned_cols=152 Identities=28% Similarity=0.450 Sum_probs=135.4
Q ss_pred HHHhCCCCcceeecccccceEEEEEeC------CCcEEEEEEEeccCC-chHHHHHHHHHHHHhCCCCCceeEEEEEecC
Q 046544 488 CRATNGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKVISSCSNE 560 (646)
Q Consensus 488 ~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~ 560 (646)
....++|+..+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|+++++.++||||+++++++...
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 334578999999999999999999864 358899999976543 3356789999999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHhhCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecC
Q 046544 561 EFKALVLEYKPHGSLEKYLYSSN-----------------------CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617 (646)
Q Consensus 561 ~~~~lv~e~~~~g~L~~~l~~~~-----------------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrd 617 (646)
+..++||||+++|+|.+++.... ..+++.++..++.|+++|++||| +++|+|||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~D 199 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRD 199 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCC
Confidence 99999999999999999997642 46889999999999999999999 88999999
Q ss_pred CCCCCEEEcCCCcEEEEeecCcccc
Q 046544 618 LKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 618 lk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
|||+||+++.++.+||+|||+++.+
T Consensus 200 lkp~NIl~~~~~~~kl~Dfg~~~~~ 224 (343)
T 1luf_A 200 LATRNCLVGENMVVKIADFGLSRNI 224 (343)
T ss_dssp CSGGGEEECGGGCEEECCCSCHHHH
T ss_pred CCcceEEECCCCeEEEeecCCCccc
Confidence 9999999999999999999999764
No 167
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.92 E-value=5.4e-25 Score=231.46 Aligned_cols=149 Identities=30% Similarity=0.486 Sum_probs=133.2
Q ss_pred CCCCcceeecccccceEEEEEeC--------CCcEEEEEEEeccCC-chHHHHHHHHHHHHhC-CCCCceeEEEEEecCC
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG--------DGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRNLIKVISSCSNEE 561 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~ 561 (646)
++|+..+.||+|+||.||+|+.. .+..||+|++..... ...+++.+|+++++.+ +||||+++++++..++
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 57888999999999999999852 246799999976543 3456788999999999 9999999999999999
Q ss_pred eeEEEEEecCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEc
Q 046544 562 FKALVLEYKPHGSLEKYLYSSN---------------CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLD 626 (646)
Q Consensus 562 ~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~ 626 (646)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~ 225 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVT 225 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEEc
Confidence 9999999999999999998654 35899999999999999999999 88999999999999999
Q ss_pred CCCcEEEEeecCccccc
Q 046544 627 DNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 627 ~~~~~ki~DfGla~~~~ 643 (646)
.++.+||+|||+|+.+.
T Consensus 226 ~~~~~kL~DFG~a~~~~ 242 (382)
T 3tt0_A 226 EDNVMKIADFGLARDIH 242 (382)
T ss_dssp TTCCEEECSCSCCCCSS
T ss_pred CCCcEEEcccCcccccc
Confidence 99999999999998654
No 168
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.92 E-value=3.8e-25 Score=231.27 Aligned_cols=146 Identities=21% Similarity=0.288 Sum_probs=129.1
Q ss_pred hCCCCcceeecccccceEEEEE------eCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCC---CCCceeEEEEEecCC
Q 046544 491 TNGFSENNLIGRGGFGSVYKAR------LGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR---HRNLIKVISSCSNEE 561 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~~~~~~~~~~ 561 (646)
.++|...+.||+|+||.||+|. ..+++.||+|++... ...++.+|+++++.++ |+||+++++++...+
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 3678899999999999999994 346889999998754 3456778888888886 999999999999999
Q ss_pred eeEEEEEecCCCCHHHHHhh----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcC----------
Q 046544 562 FKALVLEYKPHGSLEKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD---------- 627 (646)
Q Consensus 562 ~~~lv~e~~~~g~L~~~l~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~---------- 627 (646)
..++|||||++|+|.+++.. ....+++..+..++.|++.||+||| +++|+||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCcccccc
Confidence 99999999999999999975 3456899999999999999999999 889999999999999988
Q ss_pred -CCcEEEEeecCcccc
Q 046544 628 -NLVAYLSDFGIAKLL 642 (646)
Q Consensus 628 -~~~~ki~DfGla~~~ 642 (646)
++.+||+|||+|+.+
T Consensus 218 ~~~~~kl~DFG~a~~~ 233 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDM 233 (365)
T ss_dssp -CTTEEECCCTTCEEG
T ss_pred ccCCEEEeeCchhhhh
Confidence 899999999999754
No 169
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.92 E-value=3.8e-25 Score=237.96 Aligned_cols=148 Identities=25% Similarity=0.467 Sum_probs=133.1
Q ss_pred hCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEec
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYK 570 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 570 (646)
.++|+..+.||+|+||.||+|+++++..||||+++... ...+.+.+|+++++.++||||+++++++. .+..++||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 36788899999999999999999888999999997543 34678999999999999999999999986 56789999999
Q ss_pred CCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 571 PHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 571 ~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
++|+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 265 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 265 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 9999999997542 25788899999999999999999 8899999999999999999999999999998753
No 170
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.92 E-value=1e-24 Score=230.06 Aligned_cols=149 Identities=20% Similarity=0.263 Sum_probs=134.6
Q ss_pred hCCCCcceeeccc--ccceEEEEEeC-CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEE
Q 046544 491 TNGFSENNLIGRG--GFGSVYKARLG-DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKAL 565 (646)
Q Consensus 491 ~~~~~~~~~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~l 565 (646)
.++|+..+.||+| +||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++|||||++++++..++..|+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3678999999999 99999999976 79999999998653 2334678889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 566 VLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
|||||++|+|.+++... ...+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 99999999999999765 246899999999999999999999 889999999999999999999999999987654
No 171
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.92 E-value=5.9e-25 Score=226.21 Aligned_cols=149 Identities=28% Similarity=0.427 Sum_probs=134.6
Q ss_pred CCCCcceeecccccceEEEEEe-----CCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEec--CCeeE
Q 046544 492 NGFSENNLIGRGGFGSVYKARL-----GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN--EEFKA 564 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~--~~~~~ 564 (646)
++|+..+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++.. ....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5788999999999999999984 3688999999987665666789999999999999999999998874 46689
Q ss_pred EEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 565 LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
+||||+++|+|.+++......+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 999999999999999876556899999999999999999999 8899999999999999999999999999998653
No 172
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.92 E-value=7.8e-25 Score=223.83 Aligned_cols=150 Identities=25% Similarity=0.443 Sum_probs=133.5
Q ss_pred hCCCCcceeecccccceEEEEEe------CCCcEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCee
Q 046544 491 TNGFSENNLIGRGGFGSVYKARL------GDGMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFK 563 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~ 563 (646)
.++|...+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 46788999999999999999985 245889999987543 33456788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhCCC-----------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCC
Q 046544 564 ALVLEYKPHGSLEKYLYSSNC-----------------------ILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKP 620 (646)
Q Consensus 564 ~lv~e~~~~g~L~~~l~~~~~-----------------------~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~ 620 (646)
++||||+++|+|.+++..... .+++.++..++.|++.|++||| .++|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccch
Confidence 999999999999999986532 3788899999999999999999 88999999999
Q ss_pred CCEEEcCCCcEEEEeecCccccc
Q 046544 621 DNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 621 ~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
+||+++.++.+||+|||+|+...
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~ 201 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVY 201 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECT
T ss_pred heEEEcCCCCEEEcccccccccc
Confidence 99999999999999999998653
No 173
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=9.7e-25 Score=222.71 Aligned_cols=201 Identities=16% Similarity=0.201 Sum_probs=172.5
Q ss_pred ccCcEEEeecccccccCCccc--ccCCCCCEEEccCCccccccC----ccccCCCCCCeEEeecccccCcCchhhcCCCC
Q 046544 162 HSLKDFYMSNCNVSGGIPEEI--TNLTNSITIDLGGNKLNGSIP----ITLSKLQKLQGLGLDDNKLEGSIPDSICRLTE 235 (646)
Q Consensus 162 ~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 235 (646)
++|++|++++|.+.+..|..+ ..+++|++|++++|++.+..+ ..+..+++|++|+|++|++.+..|..|..+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 358888888888888888887 889999999999999987555 44567899999999999999888899999999
Q ss_pred CcEEEecCCccccc---C-CccccCCCCCceeecCCCcccccccc----cccccccccccCCCCcccCCCCCccCcc---
Q 046544 236 LYELELGGNKLFGS---I-PACFSNLASLRILSLSSNELTSIPLT----FWNLKDILQLNFSSNFLTGPLPLEIGNL--- 304 (646)
Q Consensus 236 L~~L~L~~N~i~~~---~-~~~~~~l~~L~~L~L~~N~l~~lp~~----~~~l~~L~~L~l~~N~l~~~~~~~~~~l--- 304 (646)
|++|+|++|++.+. . +..+..+++|++|+|++|.++.+|.. +..+++|++|++++|.+++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 99999999998652 2 33457899999999999999877653 4678999999999999998888888777
Q ss_pred ccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcc
Q 046544 305 KVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSG 367 (646)
Q Consensus 305 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 367 (646)
++|+.|++++|+++. +|..+. ++|++|+|++|++++. |. +..+++|+.|+|++|+|+.
T Consensus 251 ~~L~~L~Ls~N~l~~-lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 251 SALNSLNLSFAGLEQ-VPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp TTCCCEECCSSCCCS-CCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCCEEECCCCCCCc-hhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 699999999999995 566664 7999999999999965 33 7889999999999999974
No 174
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.92 E-value=2.3e-25 Score=227.53 Aligned_cols=149 Identities=24% Similarity=0.408 Sum_probs=129.3
Q ss_pred hCCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccCC---chHHHHHHHHHHHHhCCCCCceeEEEEEecCCe----
Q 046544 491 TNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEF---- 562 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~---- 562 (646)
.++|+..+.||+|+||.||+|+. .+++.||+|++..... ...+.+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 36799999999999999999996 5789999999976532 234578899999999999999999999876543
Q ss_pred eEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 563 KALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 563 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
.|+||||++||+|.+++...+ .+++.++..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+.+
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 499999999999999997654 6899999999999999999999 889999999999999999999999999999865
Q ss_pred c
Q 046544 643 I 643 (646)
Q Consensus 643 ~ 643 (646)
.
T Consensus 167 ~ 167 (311)
T 3ork_A 167 A 167 (311)
T ss_dssp -
T ss_pred c
Confidence 3
No 175
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.92 E-value=9.9e-25 Score=234.34 Aligned_cols=146 Identities=34% Similarity=0.479 Sum_probs=131.3
Q ss_pred hCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCC-eeEEEEEe
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEE-FKALVLEY 569 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~-~~~lv~e~ 569 (646)
.++|+..+.||+|+||.||+|++. |+.||||+++... ..+.+.+|++++++++||||+++++++...+ ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 357888899999999999999985 7899999997543 4578999999999999999999999987665 79999999
Q ss_pred cCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 570 KPHGSLEKYLYSSNC-ILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 570 ~~~g~L~~~l~~~~~-~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
+++|+|.+++...+. .+++..+..++.|++.||+||| .++|+||||||+||+++.++.+||+|||+|+..
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 339 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 339 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccc
Confidence 999999999987543 4689999999999999999999 889999999999999999999999999999854
No 176
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.92 E-value=1.1e-24 Score=236.70 Aligned_cols=149 Identities=27% Similarity=0.412 Sum_probs=134.3
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
++|...+.||+|+||+||+|+.. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 56888899999999999999975 69999999997542 233467889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSN---CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||++||+|.+++.... ..+++..+..++.||+.||+||| ..+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 9999999999987642 46899999999999999999999 8899999999999999999999999999998754
No 177
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.92 E-value=2.9e-25 Score=238.54 Aligned_cols=147 Identities=27% Similarity=0.347 Sum_probs=124.5
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEecc---CCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ---CGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
++|+..+.||+|+||.||+|+.. +|+.||||++... .......+.+|+++++.++||||+++++++...+..++||
T Consensus 148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 227 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 227 (446)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence 57899999999999999999864 6899999999753 2334456788999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCL-APVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
||+++|+|.+++...+ .+++..+..++.|++.||+||| . ++|+||||||+||+++.++.+||+|||+|+..
T Consensus 228 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 228 EYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp CCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred eeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 9999999999987654 6899999999999999999999 6 89999999999999999999999999999864
No 178
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.92 E-value=3.9e-26 Score=238.37 Aligned_cols=213 Identities=18% Similarity=0.215 Sum_probs=114.8
Q ss_pred cccccCC-CCCEEEccCCccccccCccccCC-----CCCCeEEeecccccCcCchhhcC----C-CCCcEEEecCCcccc
Q 046544 180 EEITNLT-NSITIDLGGNKLNGSIPITLSKL-----QKLQGLGLDDNKLEGSIPDSICR----L-TELYELELGGNKLFG 248 (646)
Q Consensus 180 ~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~----l-~~L~~L~L~~N~i~~ 248 (646)
+.+..++ +|++|+|++|++++..+..+..+ ++|++|+|++|++++..+..+.. + ++|++|+|++|++++
T Consensus 44 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 123 (362)
T 3goz_A 44 QAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSS 123 (362)
T ss_dssp HHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGG
T ss_pred HHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCc
Confidence 4444555 55555555555555444444443 55555666665555444443322 2 556666666666554
Q ss_pred cCCcccc----C-CCCCceeecCCCcccc-----ccccccccc-ccccccCCCCcccCCCCCccCc----c-ccceEEEc
Q 046544 249 SIPACFS----N-LASLRILSLSSNELTS-----IPLTFWNLK-DILQLNFSSNFLTGPLPLEIGN----L-KVLIGIDF 312 (646)
Q Consensus 249 ~~~~~~~----~-l~~L~~L~L~~N~l~~-----lp~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~----l-~~L~~L~l 312 (646)
..+..+. . .++|++|+|++|.++. ++..+...+ +|++|++++|.+++..+..+.. . ++|+.||+
T Consensus 124 ~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L 203 (362)
T 3goz_A 124 KSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDL 203 (362)
T ss_dssp SCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEEC
T ss_pred HHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEEC
Confidence 4443322 2 1356666666666552 222233333 5666666666665444433332 2 46666666
Q ss_pred cccccccc----CccccCC-CCCCCEEEccCccCCCccc----ccccCCCCCCEEEccCCcCccc-------CCccccCC
Q 046544 313 SMNNFSSV----IPTEIGG-LKNLEYLFLGYNRLEGSIP----DSFGDLISLKFLNLSNNNLSGA-------IPTSLEKL 376 (646)
Q Consensus 313 s~N~l~~~----~~~~~~~-l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~-------~p~~~~~l 376 (646)
++|.+++. ++..+.. .++|++|+|++|++++..+ ..+..+++|+.|+|++|.+.+. ++..+..+
T Consensus 204 s~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l 283 (362)
T 3goz_A 204 SANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNI 283 (362)
T ss_dssp TTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTC
T ss_pred CCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccC
Confidence 66666652 2333433 3467777777777765444 3345567777777777774322 23355566
Q ss_pred CCCCceeCcCCcceee
Q 046544 377 SYLEDLNLSFNKLEGE 392 (646)
Q Consensus 377 ~~L~~L~L~~N~l~~~ 392 (646)
++|+.||+++|++...
T Consensus 284 ~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 284 QKIILVDKNGKEIHPS 299 (362)
T ss_dssp CEEEEECTTSCBCCGG
T ss_pred CceEEEecCCCcCCCc
Confidence 6777777777776643
No 179
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.92 E-value=7.6e-25 Score=223.67 Aligned_cols=148 Identities=24% Similarity=0.256 Sum_probs=129.4
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC--chHHHHHHHHHHHHhC-CCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG--RAFKSFAVECEMMKSI-RHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ 567 (646)
++|+..++||+|+||+||+|+.. +|+.||||++..... .....+..|+..+..+ +||||+++++++..++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57899999999999999999976 799999999865432 2334455666666555 9999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||+ +++|.+++...+..+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+|+...
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 999 67999998877777999999999999999999999 8899999999999999999999999999988653
No 180
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=1.1e-24 Score=225.96 Aligned_cols=151 Identities=28% Similarity=0.487 Sum_probs=131.7
Q ss_pred HhCCCCcceeecccccceEEEEEe------CCCcEEEEEEEeccC-CchHHHHHHHHHHHHhC-CCCCceeEEEEEecCC
Q 046544 490 ATNGFSENNLIGRGGFGSVYKARL------GDGMEVAVKVFNLQC-GRAFKSFAVECEMMKSI-RHRNLIKVISSCSNEE 561 (646)
Q Consensus 490 ~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~ 561 (646)
..++|...+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 446889999999999999999985 246689999997543 33456789999999999 9999999999999999
Q ss_pred eeEEEEEecCCCCHHHHHhhCCC----------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCC
Q 046544 562 FKALVLEYKPHGSLEKYLYSSNC----------------------ILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLK 619 (646)
Q Consensus 562 ~~~lv~e~~~~g~L~~~l~~~~~----------------------~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk 619 (646)
..++||||+++|+|.+++..... .+++..+..++.|++.||+||| ..+|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCC
Confidence 99999999999999999976542 3788899999999999999999 8899999999
Q ss_pred CCCEEEcCCCcEEEEeecCccccc
Q 046544 620 PDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 620 ~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|+||+++.++.+||+|||+|+.+.
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~ 223 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIM 223 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGG
T ss_pred hhhEEEcCCCcEEeCCCccCcccc
Confidence 999999999999999999998653
No 181
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.92 E-value=1.4e-24 Score=217.97 Aligned_cols=150 Identities=26% Similarity=0.475 Sum_probs=135.9
Q ss_pred hCCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALV 566 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv 566 (646)
.++|+..+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35789999999999999999986 479999999997542 22346788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 567 LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|||+++++|.+++......+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 9999999999999887667899999999999999999999 8899999999999999999999999999998653
No 182
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.92 E-value=1.3e-24 Score=223.63 Aligned_cols=149 Identities=31% Similarity=0.501 Sum_probs=134.6
Q ss_pred CCCCcceeecccccceEEEEEe-----CCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCC--eeE
Q 046544 492 NGFSENNLIGRGGFGSVYKARL-----GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEE--FKA 564 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~--~~~ 564 (646)
++|+..+.||+|+||.||+|++ .+|+.||+|++........+.+.+|+++++.++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4688899999999999999984 368999999998766666778999999999999999999999987654 689
Q ss_pred EEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 565 LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
+||||+++|+|.+++......+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+...
T Consensus 121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 999999999999999887667899999999999999999999 8899999999999999999999999999998764
No 183
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.91 E-value=7.1e-25 Score=220.48 Aligned_cols=149 Identities=24% Similarity=0.373 Sum_probs=125.3
Q ss_pred hCCCCcceeecccccceEEEEEeC----CCcEEEEEEEeccCC-chHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKAL 565 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~l 565 (646)
.++|+..+.||+|+||.||+|+.. .+..||+|++..... ...+.+.+|+.+++.++||||+++++++. ++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 367889999999999999999864 256799998875432 34567889999999999999999999974 567899
Q ss_pred EEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 566 VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||||+++|+|.+++......+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+...
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccC
Confidence 99999999999999877667899999999999999999999 8899999999999999999999999999998653
No 184
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.91 E-value=7.5e-25 Score=236.24 Aligned_cols=147 Identities=23% Similarity=0.380 Sum_probs=121.6
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecC-----Cee
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNE-----EFK 563 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~-----~~~ 563 (646)
++|+..+.||+|+||+||+|+.. +|+.||||++.... ....+++.+|+++++.++||||+++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 67999999999999999999865 78999999987543 23456788999999999999999999998543 568
Q ss_pred EEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 564 ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 564 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|+||||+ +|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 133 ~lv~e~~-~~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp EEEECCC-SEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred EEEEecc-ccchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 9999998 56999998765 36899999999999999999999 8899999999999999999999999999998764
No 185
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.91 E-value=5.1e-25 Score=230.24 Aligned_cols=148 Identities=26% Similarity=0.457 Sum_probs=130.0
Q ss_pred CCCCcceeecccccceEEEEEeC------CCcEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKA 564 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~ 564 (646)
++|+..+.||+|+||.||+|++. +++.||||+++... ......+.+|+.++++++||||+++++++...+..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 56888999999999999999843 46789999987543 334457889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCC---cEEEEe
Q 046544 565 LVLEYKPHGSLEKYLYSSN------CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNL---VAYLSD 635 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~~~~------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~---~~ki~D 635 (646)
+||||+++|+|.+++...+ ..+++.++..++.|++.||+||| +++|+||||||+||+++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECC
Confidence 9999999999999997643 35889999999999999999999 88999999999999998554 599999
Q ss_pred ecCcccc
Q 046544 636 FGIAKLL 642 (646)
Q Consensus 636 fGla~~~ 642 (646)
||+|+.+
T Consensus 228 FG~a~~~ 234 (367)
T 3l9p_A 228 FGMARDI 234 (367)
T ss_dssp CHHHHHH
T ss_pred Ccccccc
Confidence 9999753
No 186
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.91 E-value=1.2e-24 Score=225.73 Aligned_cols=147 Identities=24% Similarity=0.365 Sum_probs=122.0
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEe
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 569 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 569 (646)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 367889999999999999999976 58899999997543 335678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcC---CCcEEEEeecCccccc
Q 046544 570 KPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAKLLI 643 (646)
Q Consensus 570 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~---~~~~ki~DfGla~~~~ 643 (646)
+++|+|.+++...+ .+++.++..++.|++.|++||| ..+|+||||||+||+++. ++.+||+|||+|+...
T Consensus 130 ~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~ 202 (349)
T 2w4o_A 130 VTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE 202 (349)
T ss_dssp CCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence 99999999987654 6899999999999999999999 889999999999999975 8899999999998653
No 187
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.91 E-value=6e-25 Score=236.19 Aligned_cols=148 Identities=28% Similarity=0.485 Sum_probs=131.0
Q ss_pred hCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEec
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYK 570 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 570 (646)
.++|+..+.||+|+||.||+|++.++..||||+++... ...+++.+|++++++++||||+++++++.. +..++||||+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 35688899999999999999999888889999987543 335689999999999999999999999876 6789999999
Q ss_pred CCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 571 PHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 571 ~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
++|+|.+++... +..+++..+..++.|++.||+||| .++|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331 (452)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence 999999999753 245889999999999999999999 8899999999999999999999999999998754
No 188
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.91 E-value=2.3e-24 Score=220.15 Aligned_cols=148 Identities=29% Similarity=0.396 Sum_probs=133.1
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC--chHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG--RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 568 (646)
++|+..+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57899999999999999999975 599999999865533 234567899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 569 YKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|++++++.+++... ..+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 83 ~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 153 (311)
T 4agu_A 83 YCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLT 153 (311)
T ss_dssp CCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred eCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence 99999998887654 36899999999999999999999 8899999999999999999999999999998754
No 189
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.91 E-value=7.5e-25 Score=224.98 Aligned_cols=151 Identities=28% Similarity=0.533 Sum_probs=121.6
Q ss_pred HhCCCCcceeecccccceEEEEEeCC-C---cEEEEEEEecc--CCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCee
Q 046544 490 ATNGFSENNLIGRGGFGSVYKARLGD-G---MEVAVKVFNLQ--CGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFK 563 (646)
Q Consensus 490 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~ 563 (646)
..++|+..+.||+|+||.||+|+... + ..||||+++.. .....+.+.+|++++++++||||+++++++...+..
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 34689999999999999999998653 3 27999998754 344567899999999999999999999999877655
Q ss_pred ------EEEEEecCCCCHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEE
Q 046544 564 ------ALVLEYKPHGSLEKYLYSSN-----CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAY 632 (646)
Q Consensus 564 ------~lv~e~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~k 632 (646)
++||||+++|+|.+++.... ..+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEE
Confidence 99999999999999986432 25889999999999999999999 88999999999999999999999
Q ss_pred EEeecCccccc
Q 046544 633 LSDFGIAKLLI 643 (646)
Q Consensus 633 i~DfGla~~~~ 643 (646)
|+|||+|+.+.
T Consensus 178 l~Dfg~a~~~~ 188 (323)
T 3qup_A 178 VADFGLSRKIY 188 (323)
T ss_dssp ECCCCC-----
T ss_pred Eeecccccccc
Confidence 99999998653
No 190
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.91 E-value=5.2e-26 Score=235.02 Aligned_cols=148 Identities=21% Similarity=0.286 Sum_probs=124.5
Q ss_pred hCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccC--------CchHHHHHHHHHHHHhCC---------CCCceeE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--------GRAFKSFAVECEMMKSIR---------HRNLIKV 553 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---------H~niv~~ 553 (646)
.++|+..+.||+|+||+||+|+. +|+.||||++.... ....+.+.+|+.+++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688899999999999999998 78999999998653 223477889999998885 8888887
Q ss_pred EEEEe------------------------------cCCeeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHH
Q 046544 554 ISSCS------------------------------NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALE 603 (646)
Q Consensus 554 ~~~~~------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~ 603 (646)
.+++. ..+..|+|||||++|++.+.+.. ..+++..+..++.|++.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 77643 26789999999999977666644 35799999999999999999
Q ss_pred HHhcCCCCCeEecCCCCCCEEEcCCC--------------------cEEEEeecCccccc
Q 046544 604 YLHFGCLAPVIHCDLKPDNVLLDDNL--------------------VAYLSDFGIAKLLI 643 (646)
Q Consensus 604 ~lH~~~~~~iiHrdlk~~Nil~~~~~--------------------~~ki~DfGla~~~~ 643 (646)
|||+ +++|+||||||+|||++.++ .+||+|||+|+...
T Consensus 176 ~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~ 233 (336)
T 2vuw_A 176 VAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLER 233 (336)
T ss_dssp HHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEE
T ss_pred HHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecC
Confidence 9992 36899999999999999876 99999999998754
No 191
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.91 E-value=1.3e-24 Score=225.14 Aligned_cols=148 Identities=30% Similarity=0.407 Sum_probs=132.4
Q ss_pred CCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccCC---chHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
+.|+..+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588889999999999999986 5799999999975532 23457889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||+. |++.+++......+++..+..++.|+++||+||| ..+|+||||||+||+++.++.+||+|||+|+...
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 9997 5888888766667899999999999999999999 8899999999999999999999999999998654
No 192
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.91 E-value=1.4e-24 Score=221.94 Aligned_cols=151 Identities=26% Similarity=0.420 Sum_probs=134.6
Q ss_pred hCCCCcceeecccccceEEEEEe------CCCcEEEEEEEeccCC-chHHHHHHHHHHHHhC-CCCCceeEEEEEecCCe
Q 046544 491 TNGFSENNLIGRGGFGSVYKARL------GDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRNLIKVISSCSNEEF 562 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~~ 562 (646)
.++|+..+.||+|+||.||+|++ .+++.||+|++..... ...+.+.+|+++++++ +||||+++++++..++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 36788999999999999999984 2578899999976543 3456789999999999 99999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhCCC-----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEE
Q 046544 563 KALVLEYKPHGSLEKYLYSSNC-----------------ILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL 625 (646)
Q Consensus 563 ~~lv~e~~~~g~L~~~l~~~~~-----------------~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~ 625 (646)
.++||||+++|+|.+++..... .+++..+..++.|++.|++||| .++|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEE
Confidence 9999999999999999976542 4889999999999999999999 8899999999999999
Q ss_pred cCCCcEEEEeecCcccccC
Q 046544 626 DDNLVAYLSDFGIAKLLIG 644 (646)
Q Consensus 626 ~~~~~~ki~DfGla~~~~~ 644 (646)
+.++.+||+|||+|+....
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~ 197 (313)
T 1t46_A 179 THGRITKICDFGLARDIKN 197 (313)
T ss_dssp ETTTEEEECCCGGGSCTTS
T ss_pred cCCCCEEEccccccccccc
Confidence 9999999999999987643
No 193
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.91 E-value=2.3e-24 Score=220.61 Aligned_cols=147 Identities=27% Similarity=0.358 Sum_probs=130.6
Q ss_pred CCCCcc-eeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhC-CCCCceeEEEEEecCCeeEEEEE
Q 046544 492 NGFSEN-NLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSI-RHRNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 492 ~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e 568 (646)
+.|++. +.||+|+||.||+|+.. +++.||||++........+.+.+|+++++++ +||||+++++++..++..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 567764 78999999999999854 7999999999876655667889999999985 79999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCc---EEEEeecCcccc
Q 046544 569 YKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLV---AYLSDFGIAKLL 642 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~---~ki~DfGla~~~ 642 (646)
|+++|+|.+++.... .+++..+..++.|++.|++||| ..+|+||||||+||+++.++. +||+|||+++.+
T Consensus 92 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred cCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 999999999997654 6889999999999999999999 889999999999999987765 999999998764
No 194
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.91 E-value=1.7e-24 Score=223.42 Aligned_cols=150 Identities=29% Similarity=0.508 Sum_probs=132.3
Q ss_pred hCCCCcceeecccccceEEEEEeC--------CCcEEEEEEEeccCC-chHHHHHHHHHHHHhC-CCCCceeEEEEEecC
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG--------DGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRNLIKVISSCSNE 560 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~ 560 (646)
.++|+..+.||+|+||.||+|++. +++.||+|++..... ...+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 367889999999999999999863 467899999875532 3456788999999999 999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEE
Q 046544 561 EFKALVLEYKPHGSLEKYLYSSN---------------CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL 625 (646)
Q Consensus 561 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~ 625 (646)
+..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| ..+|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 99999999999999999997653 24788999999999999999999 8899999999999999
Q ss_pred cCCCcEEEEeecCccccc
Q 046544 626 DDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 626 ~~~~~~ki~DfGla~~~~ 643 (646)
+.++.+||+|||+|+...
T Consensus 191 ~~~~~~kL~Dfg~~~~~~ 208 (334)
T 2pvf_A 191 TENNVMKIADFGLARDIN 208 (334)
T ss_dssp CTTCCEEECCCTTCEECT
T ss_pred cCCCCEEEcccccccccc
Confidence 999999999999998654
No 195
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.91 E-value=1.5e-24 Score=218.55 Aligned_cols=149 Identities=28% Similarity=0.406 Sum_probs=131.9
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEe
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 569 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 569 (646)
++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 46888999999999999999865 68999999987654 33457889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEE---cCCCcEEEEeecCccccc
Q 046544 570 KPHGSLEKYLYSS---NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 570 ~~~g~L~~~l~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~---~~~~~~ki~DfGla~~~~ 643 (646)
+++|+|.+++... +..+++..+..++.|++.|++||| ..+|+||||||+||++ +.++.+||+|||+|+.+.
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999988543 356899999999999999999999 8899999999999999 456789999999998654
No 196
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.91 E-value=1.3e-24 Score=220.85 Aligned_cols=148 Identities=26% Similarity=0.401 Sum_probs=132.7
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEe
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 569 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 569 (646)
.++|+..+.||+|+||.||+|+.. +++.||+|++........+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 367899999999999999999975 5899999999876666678899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccc
Q 046544 570 KPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641 (646)
Q Consensus 570 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~ 641 (646)
+++++|.+++......+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++.
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 166 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK 166 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHH
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcc
Confidence 9999999998876667899999999999999999999 88999999999999999999999999998753
No 197
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.91 E-value=9e-25 Score=225.37 Aligned_cols=150 Identities=29% Similarity=0.421 Sum_probs=133.2
Q ss_pred HhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC--------chHHHHHHHHHHHHhCCCCCceeEEEEEecC
Q 046544 490 ATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG--------RAFKSFAVECEMMKSIRHRNLIKVISSCSNE 560 (646)
Q Consensus 490 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~ 560 (646)
..++|+..+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+++++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 3467999999999999999999854 689999999986531 1234567899999999999999999999999
Q ss_pred CeeEEEEEecCCC-CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCc
Q 046544 561 EFKALVLEYKPHG-SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639 (646)
Q Consensus 561 ~~~~lv~e~~~~g-~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla 639 (646)
+..++||||+.+| +|.+++.... .+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 9999987654 6899999999999999999999 889999999999999999999999999999
Q ss_pred cccc
Q 046544 640 KLLI 643 (646)
Q Consensus 640 ~~~~ 643 (646)
+.+.
T Consensus 178 ~~~~ 181 (335)
T 3dls_A 178 AYLE 181 (335)
T ss_dssp EECC
T ss_pred eECC
Confidence 8764
No 198
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.91 E-value=2.7e-24 Score=216.79 Aligned_cols=150 Identities=23% Similarity=0.375 Sum_probs=132.7
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC--CchHHHHHHHHHHHHhC-CCCCceeEEEEEecCCeeEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSI-RHRNLIKVISSCSNEEFKALV 566 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~~~~lv 566 (646)
.++|+..+.||+|+||.||+|+.. +++.||+|++.... .....++.+|+..+..+ +||||+++++++..++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467889999999999999999975 79999999998643 33456788999999999 999999999999999999999
Q ss_pred EEecCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcC----------------
Q 046544 567 LEYKPHGSLEKYLYSSN---CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD---------------- 627 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~---------------- 627 (646)
|||+++|+|.+++.... ..+++..+..++.|++.||+||| .++|+||||||+||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999997642 46899999999999999999999 889999999999999984
Q ss_pred ---CCcEEEEeecCccccc
Q 046544 628 ---NLVAYLSDFGIAKLLI 643 (646)
Q Consensus 628 ---~~~~ki~DfGla~~~~ 643 (646)
...+||+|||.++...
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~ 185 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRIS 185 (289)
T ss_dssp ---CCCEEECCCTTCEETT
T ss_pred cCCceEEEEcccccccccC
Confidence 4479999999988764
No 199
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=1.5e-26 Score=243.98 Aligned_cols=93 Identities=27% Similarity=0.309 Sum_probs=53.9
Q ss_pred cCccccceEEEccccccc----ccCccccCCCCCCCEEEccCccCCCc----cccccc--CCCCCCEEEccCCcCcc---
Q 046544 301 IGNLKVLIGIDFSMNNFS----SVIPTEIGGLKNLEYLFLGYNRLEGS----IPDSFG--DLISLKFLNLSNNNLSG--- 367 (646)
Q Consensus 301 ~~~l~~L~~L~ls~N~l~----~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~--~l~~L~~L~Ls~N~l~~--- 367 (646)
+..+++|+.|+|++|.++ +.+|..+..+++|++|+|++|++++. +|..+. .+++|+.|+|++|.+++
T Consensus 212 l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~ 291 (386)
T 2ca6_A 212 LAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAV 291 (386)
T ss_dssp GGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHH
T ss_pred hhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHH
Confidence 334444444555555443 33455556666666666666666544 344442 26667777777777765
Q ss_pred -cCCccc-cCCCCCCceeCcCCcceeec
Q 046544 368 -AIPTSL-EKLSYLEDLNLSFNKLEGEI 393 (646)
Q Consensus 368 -~~p~~~-~~l~~L~~L~L~~N~l~~~~ 393 (646)
.+|..+ .++++|+.|++++|++++..
T Consensus 292 ~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 292 RTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 355555 45677777777777776543
No 200
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.91 E-value=2.6e-24 Score=218.53 Aligned_cols=147 Identities=31% Similarity=0.486 Sum_probs=126.1
Q ss_pred hCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHh--CCCCCceeEEEEEecC----CeeE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKS--IRHRNLIKVISSCSNE----EFKA 564 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~~~~~~~~~----~~~~ 564 (646)
.++|+..+.||+|+||.||+|+. +|+.||||++... ..+.+.+|.+++.. ++||||+++++++... ...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 36799999999999999999988 6899999998643 33556667777766 7999999999986543 4589
Q ss_pred EEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeEecCCCCCCEEEcCCCcEEEEeecCc
Q 046544 565 LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG-----CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-----~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla 639 (646)
+||||+++|+|.+++... .+++..+..++.|++.|++|||.. +.++|+||||||+||+++.++.+||+|||+|
T Consensus 83 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 999999999999999654 589999999999999999999932 2578999999999999999999999999999
Q ss_pred cccc
Q 046544 640 KLLI 643 (646)
Q Consensus 640 ~~~~ 643 (646)
+...
T Consensus 161 ~~~~ 164 (301)
T 3q4u_A 161 VMHS 164 (301)
T ss_dssp EEEE
T ss_pred eecc
Confidence 7653
No 201
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.91 E-value=8e-25 Score=219.81 Aligned_cols=148 Identities=26% Similarity=0.476 Sum_probs=132.0
Q ss_pred hCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEec
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYK 570 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 570 (646)
.++|+..+.||+|+||.||+|+..+++.||+|++.... ...+.+.+|+++++.++||||+++++++. .+..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 36788999999999999999998888899999987543 34578899999999999999999999886 45689999999
Q ss_pred CCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 571 PHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 571 ~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
++++|.+++.... ..+++..+..++.|++.|++||| ..+|+||||||+||++++++.+||+|||+++...
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 160 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCccccccc
Confidence 9999999986532 25889999999999999999999 8899999999999999999999999999998764
No 202
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.91 E-value=2.7e-24 Score=220.70 Aligned_cols=148 Identities=26% Similarity=0.389 Sum_probs=133.4
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC------chHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG------RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKA 564 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~ 564 (646)
++|+..+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|+.+++.++||||+++++++...+..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 56889999999999999999965 689999999975432 13567899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCC----cEEEEeecCcc
Q 046544 565 LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNL----VAYLSDFGIAK 640 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~----~~ki~DfGla~ 640 (646)
+||||+++++|.+++.... .+++..+..++.|++.|++||| ..+|+||||||+||+++.++ .+||+|||+++
T Consensus 92 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp EEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 9999999999999997653 6889999999999999999999 88999999999999999887 79999999998
Q ss_pred ccc
Q 046544 641 LLI 643 (646)
Q Consensus 641 ~~~ 643 (646)
.+.
T Consensus 168 ~~~ 170 (321)
T 2a2a_A 168 EIE 170 (321)
T ss_dssp ECC
T ss_pred ecC
Confidence 754
No 203
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.91 E-value=2.7e-24 Score=215.44 Aligned_cols=147 Identities=26% Similarity=0.463 Sum_probs=119.9
Q ss_pred CCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
++|+..+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5799999999999999999985 478999999987543 233467889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||+ ++++.+++...+ .+++.++..++.|++.|++||| ..+|+||||||+||++++++.+||+|||+|+...
T Consensus 93 e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 163 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp ECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC----
T ss_pred hhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceecc
Confidence 999 678888887654 6899999999999999999999 8899999999999999999999999999997653
No 204
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91 E-value=1.8e-24 Score=223.11 Aligned_cols=149 Identities=28% Similarity=0.503 Sum_probs=129.6
Q ss_pred CCCCcceeecccccceEEEEEeCC-----CcEEEEEEEeccCC-chHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLGD-----GMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKAL 565 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~l 565 (646)
.+|+..+.||+|+||.||+|+... +..||+|++..... .....+.+|+++++.++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 456778999999999999998542 34699999975533 344578899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 566 VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||||+++|+|.+++......+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+++.+.
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 198 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence 99999999999999887678999999999999999999999 8899999999999999999999999999998754
No 205
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.91 E-value=4.3e-24 Score=219.34 Aligned_cols=140 Identities=26% Similarity=0.329 Sum_probs=125.3
Q ss_pred ceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCC-CCCceeEEEEEecCCeeEEEEEecCCCC
Q 046544 497 NNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR-HRNLIKVISSCSNEEFKALVLEYKPHGS 574 (646)
Q Consensus 497 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~~~~~~~~~~~~~lv~e~~~~g~ 574 (646)
.+.||+|+||.||+|+.. +|+.||||++... ....+.+|+.+++.+. ||||+++++++..++..|+||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999975 6899999999743 3456778999999997 9999999999999999999999999999
Q ss_pred HHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCC---cEEEEeecCccccc
Q 046544 575 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNL---VAYLSDFGIAKLLI 643 (646)
Q Consensus 575 L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~---~~ki~DfGla~~~~ 643 (646)
|.+++...+ .+++.++..++.|++.|++||| .++|+||||||+||+++.++ .+||+|||+|+...
T Consensus 93 L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 160 (325)
T 3kn6_A 93 LFERIKKKK-HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP 160 (325)
T ss_dssp HHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECC
T ss_pred HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecC
Confidence 999998764 6899999999999999999999 88999999999999997665 89999999998653
No 206
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.91 E-value=1.9e-24 Score=230.92 Aligned_cols=148 Identities=25% Similarity=0.374 Sum_probs=131.3
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecC-----Ce
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNE-----EF 562 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~-----~~ 562 (646)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+++.+|+++++.++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 368999999999999999999865 68899999997543 23456789999999999999999999998776 56
Q ss_pred eEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 563 KALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 563 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
.|+||||++ |+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999996 5999998764 36899999999999999999999 889999999999999999999999999999876
Q ss_pred c
Q 046544 643 I 643 (646)
Q Consensus 643 ~ 643 (646)
.
T Consensus 180 ~ 180 (432)
T 3n9x_A 180 N 180 (432)
T ss_dssp -
T ss_pred c
Confidence 4
No 207
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.91 E-value=1.1e-24 Score=224.25 Aligned_cols=148 Identities=28% Similarity=0.443 Sum_probs=126.3
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcE----EEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGME----VAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKAL 565 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~l 565 (646)
++|+..+.||+|+||.||+|++. +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 56888999999999999999854 4443 5777765432 344578999999999999999999999998765 789
Q ss_pred EEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 566 VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||||+++|+|.+++......+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 99999999999999887778999999999999999999999 8899999999999999999999999999998654
No 208
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.91 E-value=6e-25 Score=221.77 Aligned_cols=151 Identities=28% Similarity=0.502 Sum_probs=136.1
Q ss_pred HhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEE
Q 046544 490 ATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 490 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 568 (646)
..++|+..+.||+|+||.||+|++. +++.||+|++.... ...+.+.+|+++++.++||||+++++++..++..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 4467889999999999999999976 58899999987543 345788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccccC
Q 046544 569 YKPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~~ 644 (646)
|+++++|.+++.... ..+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+...+
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 999999999998643 45899999999999999999999 88999999999999999999999999999987643
No 209
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.91 E-value=1.2e-24 Score=229.91 Aligned_cols=149 Identities=28% Similarity=0.428 Sum_probs=131.7
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecCC--eeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEE--FKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~--~~~lv~ 567 (646)
++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 56889999999999999999975 59999999997543 234567889999999999999999999998765 679999
Q ss_pred EecCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEE----cCCCcEEEEeecCccc
Q 046544 568 EYKPHGSLEKYLYSSN--CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL----DDNLVAYLSDFGIAKL 641 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~----~~~~~~ki~DfGla~~ 641 (646)
||+++|+|.+++.... ..+++..+..++.|++.||+||| ..+|+||||||+||++ +.++.+||+|||+|+.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 9999999999997643 23899999999999999999999 8899999999999999 7788899999999987
Q ss_pred cc
Q 046544 642 LI 643 (646)
Q Consensus 642 ~~ 643 (646)
+.
T Consensus 166 ~~ 167 (396)
T 4eut_A 166 LE 167 (396)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 210
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.91 E-value=3.7e-24 Score=216.74 Aligned_cols=148 Identities=22% Similarity=0.339 Sum_probs=133.6
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 57889999999999999999975 58899999987543 234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||+++++|.+++.... .+++.++..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 95 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 95 ELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp ECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 9999999999887643 6889999999999999999999 8899999999999999999999999999998653
No 211
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=1.4e-25 Score=231.77 Aligned_cols=253 Identities=19% Similarity=0.205 Sum_probs=136.0
Q ss_pred CCEEECCCCcccccCCcCccCC--CCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCccccc-CCccccCCCCCcEE
Q 046544 12 LEELDLRHNKLVGTVPAAIFNM--SMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGT-IPRFIFNASKLSIL 88 (646)
Q Consensus 12 L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L 88 (646)
++.||+++|++. +..+..+ ++++.|++++|.+.+.++... .+++|++|+|++|.+++. .+..+..+++|++|
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~--~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHF--SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCC--CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhc--cCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 556666666554 3444444 566666666666655444432 255666666666665543 55555556666666
Q ss_pred EcccCccccccCccccCcCCCCEEEccCC-CCCCCCCcccccccCCCCCCCCEEECCCC-CCCCcCCcchhccccccCcE
Q 046544 89 ELSQNSFSGFIPNTFGNLRNLEWLNLRDN-YLTSSTPELSFLSSLSNCKSLTFIHLSDN-PLDGILSKTSIGNLSHSLKD 166 (646)
Q Consensus 89 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N-~l~~~~~~~~~~~~~~~L~~ 166 (646)
+|++|.+++..+..|+.+++|++|+|++| .++.. .++..+.++++|++|++++| .+++.
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~----~l~~~~~~~~~L~~L~l~~~~~l~~~--------------- 184 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEF----ALQTLLSSCSRLDELNLSWCFDFTEK--------------- 184 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHH----HHHHHHHHCTTCCEEECCCCTTCCHH---------------
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHH----HHHHHHhcCCCCCEEcCCCCCCcChH---------------
Confidence 66666655555555555566666666655 34321 01122344455555555555 44321
Q ss_pred EEeecccccccCCcccccCC-CCCEEEccCC--ccc-cccCccccCCCCCCeEEeeccc-ccCcCchhhcCCCCCcEEEe
Q 046544 167 FYMSNCNVSGGIPEEITNLT-NSITIDLGGN--KLN-GSIPITLSKLQKLQGLGLDDNK-LEGSIPDSICRLTELYELEL 241 (646)
Q Consensus 167 L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N--~l~-~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L 241 (646)
..+..+..++ +|++|++++| .++ +..|..+..+++|++|++++|. +++..+..+..+++|++|++
T Consensus 185 ----------~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l 254 (336)
T 2ast_B 185 ----------HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSL 254 (336)
T ss_dssp ----------HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEEC
T ss_pred ----------HHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeC
Confidence 1244455666 6666666666 333 2344455566666666666666 55555566666667777777
Q ss_pred cCCc-ccccCCccccCCCCCceeecCCCccccccc-ccccc-cccccccCCCCcccCCCCCccC
Q 046544 242 GGNK-LFGSIPACFSNLASLRILSLSSNELTSIPL-TFWNL-KDILQLNFSSNFLTGPLPLEIG 302 (646)
Q Consensus 242 ~~N~-i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l-~~L~~L~l~~N~l~~~~~~~~~ 302 (646)
++|. +.......+.++++|+.|++++| ++. .+..+ ..+..|++++|.+++..|..++
T Consensus 255 ~~~~~~~~~~~~~l~~~~~L~~L~l~~~----i~~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 255 SRCYDIIPETLLELGEIPTLKTLQVFGI----VPDGTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp TTCTTCCGGGGGGGGGCTTCCEEECTTS----SCTTCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred CCCCCCCHHHHHHHhcCCCCCEEeccCc----cCHHHHHHHHhhCcceEEecccCccccCCccc
Confidence 6664 22221224566666777777666 322 22222 2355555566666555555443
No 212
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=6.9e-24 Score=209.45 Aligned_cols=178 Identities=26% Similarity=0.326 Sum_probs=89.0
Q ss_pred CCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCC
Q 046544 188 SITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSS 267 (646)
Q Consensus 188 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 267 (646)
.++++++++.++.+ |..+. ++++.|+|++|.+++..+.+|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 16 ~~~l~~~~~~l~~~-p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLDSV-PSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCSSC-CSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcccc-CCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 34455555555532 22222 3555666666666555555566666666666666666555555555556666666665
Q ss_pred CcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccc
Q 046544 268 NELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPD 347 (646)
Q Consensus 268 N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 347 (646)
|.++.+|. ..|..+++|+.|++++|.++++.+..|..+++|++|+|++|++++..+.
T Consensus 93 n~l~~~~~-----------------------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 149 (251)
T 3m19_A 93 NQLASLPL-----------------------GVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAG 149 (251)
T ss_dssp SCCCCCCT-----------------------TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred CcccccCh-----------------------hHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHH
Confidence 55554442 2223333333444444444433333444444444444444444444444
Q ss_pred cccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCccee
Q 046544 348 SFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEG 391 (646)
Q Consensus 348 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 391 (646)
.|..+++|+.|+|++|++++..+..|..+++|+.|++++|++++
T Consensus 150 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 150 AFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred HcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 44444455555555555544444444445555555555555544
No 213
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.91 E-value=2.2e-24 Score=220.81 Aligned_cols=148 Identities=24% Similarity=0.306 Sum_probs=131.4
Q ss_pred CCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEe----cCCeeEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS----NEEFKALV 566 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~----~~~~~~lv 566 (646)
++|+..+.||+|+||.||+|+. .+|+.||+|++........+.+.+|+++++.++||||+++++++. .....++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 5789999999999999999996 579999999987766566678899999999999999999999987 33578999
Q ss_pred EEecCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 567 LEYKPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
|||+++|+|.+++.. .+..+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 999999999999876 3457899999999999999999999 889999999999999999999999999987754
No 214
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.91 E-value=2e-24 Score=216.94 Aligned_cols=148 Identities=28% Similarity=0.426 Sum_probs=132.4
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALV 566 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv 566 (646)
.++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 367889999999999999999865 57899999986532 12245788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 567 LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
|||+++|+|.+++.... .+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||++...
T Consensus 88 ~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 99999999999987654 5889999999999999999999 899999999999999999999999999988654
No 215
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.91 E-value=3.3e-24 Score=221.33 Aligned_cols=148 Identities=22% Similarity=0.339 Sum_probs=133.8
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
.+|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 57889999999999999999975 58899999987542 234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||+++++|.+++.... .+++.++..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+++.+.
T Consensus 121 e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 121 ELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp CCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 9999999999987643 6889999999999999999999 8899999999999999999999999999998753
No 216
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.91 E-value=4.1e-24 Score=215.60 Aligned_cols=147 Identities=31% Similarity=0.506 Sum_probs=129.8
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCc-------hHHHHHHHHHHHHhCCCCCceeEEEEEecCCee
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGR-------AFKSFAVECEMMKSIRHRNLIKVISSCSNEEFK 563 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~ 563 (646)
++|+..+.||+|+||.||+|+.. +++.||+|++...... ..+.+.+|++++++++||||+++++++....
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 67889999999999999999974 7899999998654321 1267889999999999999999999987665
Q ss_pred EEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCEEEcCCCc-----EEEEee
Q 046544 564 ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP--VIHCDLKPDNVLLDDNLV-----AYLSDF 636 (646)
Q Consensus 564 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--iiHrdlk~~Nil~~~~~~-----~ki~Df 636 (646)
++||||+++|+|.+++......+++..+..++.|++.|++||| ..+ |+||||||+||+++.++. +||+||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 7999999999999999877778999999999999999999999 778 999999999999987776 999999
Q ss_pred cCccccc
Q 046544 637 GIAKLLI 643 (646)
Q Consensus 637 Gla~~~~ 643 (646)
|+|+...
T Consensus 174 g~~~~~~ 180 (287)
T 4f0f_A 174 GLSQQSV 180 (287)
T ss_dssp TTCBCCS
T ss_pred Ccccccc
Confidence 9998543
No 217
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91 E-value=1.5e-24 Score=225.02 Aligned_cols=152 Identities=29% Similarity=0.443 Sum_probs=127.9
Q ss_pred HHHhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC-----chHHHHHHHHHHHHhCCCCCceeEEEEEecCC
Q 046544 488 CRATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG-----RAFKSFAVECEMMKSIRHRNLIKVISSCSNEE 561 (646)
Q Consensus 488 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~ 561 (646)
....++|+..+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|+++++.++||||+++++++...+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 344578999999999999999999965 689999999874321 11346789999999999999999999999999
Q ss_pred eeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccc
Q 046544 562 FKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641 (646)
Q Consensus 562 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~ 641 (646)
..++||||+++ ++.+++......+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+.
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred ceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 99999999976 899998877667888899999999999999999 88999999999999999999999999999987
Q ss_pred cc
Q 046544 642 LI 643 (646)
Q Consensus 642 ~~ 643 (646)
+.
T Consensus 162 ~~ 163 (346)
T 1ua2_A 162 FG 163 (346)
T ss_dssp TT
T ss_pred cc
Confidence 64
No 218
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.91 E-value=5.1e-24 Score=214.51 Aligned_cols=149 Identities=23% Similarity=0.454 Sum_probs=132.8
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
.++|+..+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 468999999999999999999865 68999999997553 234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCc---EEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLV---AYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~---~ki~DfGla~~~~ 643 (646)
||+++|+|.+++.... .+++..+..++.|++.|++||| ..+|+||||||+||+++.++. +||+|||+|+...
T Consensus 85 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 9999999998887654 6899999999999999999999 889999999999999976554 9999999997654
No 219
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.91 E-value=1e-24 Score=224.26 Aligned_cols=148 Identities=26% Similarity=0.407 Sum_probs=128.5
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcE----EEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGME----VAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKAL 565 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~l 565 (646)
++|+..+.||+|+||.||+|++. +++. ||+|.+.... ....+.+.+|+.+++.++||||+++++++. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 57888999999999999999864 4443 7888775443 233456778999999999999999999886 456889
Q ss_pred EEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 566 VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||||+++|+|.+++...+..+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 166 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLP 166 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccC
Confidence 99999999999999876667888899999999999999999 8899999999999999999999999999998764
No 220
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=7.5e-24 Score=209.16 Aligned_cols=180 Identities=26% Similarity=0.339 Sum_probs=143.1
Q ss_pred CcEEEecCCcccccCCccccCCCCCceeecCCCccccccc-ccccccccccccCCCCcccCCCCCccCccccceEEEccc
Q 046544 236 LYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPL-TFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSM 314 (646)
Q Consensus 236 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~ 314 (646)
.++++++++.++. +|..+. ++++.|++++|.++.++. .|.++++|++|++++|.+++..+..|..+++|+.|++++
T Consensus 16 ~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 4455555555552 232222 455666666666665543 455566666666666666666677788889999999999
Q ss_pred ccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeecc
Q 046544 315 NNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIP 394 (646)
Q Consensus 315 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 394 (646)
|.+++..+..|+.+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|++++.+|
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 99998888999999999999999999998888889999999999999999998877789999999999999999998776
Q ss_pred CC-CCCCCCccccccCCccccC-CCC
Q 046544 395 RG-GSFGNFAAESFEGNELLCG-SPT 418 (646)
Q Consensus 395 ~~-~~~~~~~~~~~~~N~~~c~-~~~ 418 (646)
.. ..++.++.+++++|++.|+ |..
T Consensus 173 ~~~~~l~~L~~L~l~~N~~~c~~~~~ 198 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGNQFDCSRCEI 198 (251)
T ss_dssp TTTTTCTTCCEEECCSCCBCTTSTTH
T ss_pred HHHhCCCCCCEEEeeCCceeCCcccc
Confidence 44 5688999999999999997 443
No 221
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.91 E-value=5.7e-25 Score=225.80 Aligned_cols=153 Identities=22% Similarity=0.399 Sum_probs=134.2
Q ss_pred HHHHhCCCCcceeecccccceEEEEEeC------CCcEEEEEEEeccCC-chHHHHHHHHHHHHhCCCCCceeEEEEEec
Q 046544 487 LCRATNGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKVISSCSN 559 (646)
Q Consensus 487 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~~~~~~~~ 559 (646)
+....++|+..+.||+|+||.||+|+.. +++.||+|++..... .....+.+|+++++.++||||+++++++..
T Consensus 20 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 99 (322)
T 1p4o_A 20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 99 (322)
T ss_dssp TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS
T ss_pred hcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc
Confidence 3344578999999999999999999753 367899999875433 344578899999999999999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhCC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCc
Q 046544 560 EEFKALVLEYKPHGSLEKYLYSSN---------CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLV 630 (646)
Q Consensus 560 ~~~~~lv~e~~~~g~L~~~l~~~~---------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~ 630 (646)
.+..++||||+++|+|.+++...+ ..+++..+..++.|++.|++||| .++|+||||||+||+++.++.
T Consensus 100 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~ 176 (322)
T 1p4o_A 100 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFT 176 (322)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCC
T ss_pred CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCCe
Confidence 999999999999999999987532 35688999999999999999999 889999999999999999999
Q ss_pred EEEEeecCcccc
Q 046544 631 AYLSDFGIAKLL 642 (646)
Q Consensus 631 ~ki~DfGla~~~ 642 (646)
+||+|||+|+..
T Consensus 177 ~kl~Dfg~~~~~ 188 (322)
T 1p4o_A 177 VKIGDFGMTRDI 188 (322)
T ss_dssp EEECCTTCCCGG
T ss_pred EEECcCcccccc
Confidence 999999999865
No 222
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.91 E-value=1e-24 Score=224.08 Aligned_cols=148 Identities=26% Similarity=0.436 Sum_probs=129.9
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCc-hHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEe
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGR-AFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 569 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 569 (646)
++|...+.||+|+||.||+|+.. +++.||+|++...... ....+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57889999999999999999975 7899999998754322 122455799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 570 KPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 570 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
++ |++.+++...+..+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+...
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 151 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKS 151 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCccccccc
Confidence 97 5999999887777999999999999999999999 8899999999999999999999999999987643
No 223
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91 E-value=3.8e-24 Score=215.88 Aligned_cols=148 Identities=26% Similarity=0.429 Sum_probs=130.7
Q ss_pred CCCCcce-eecccccceEEEEEeC---CCcEEEEEEEeccCC-chHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEE
Q 046544 492 NGFSENN-LIGRGGFGSVYKARLG---DGMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALV 566 (646)
Q Consensus 492 ~~~~~~~-~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv 566 (646)
++|...+ .||+|+||.||+|.+. +++.||+|+++.... ...+.+.+|+++++.++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 3455555 8999999999999853 578899999986533 3456789999999999999999999999 45568999
Q ss_pred EEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 567 LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|||+++++|.+++......+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++.+.
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 9999999999999877667999999999999999999999 8899999999999999999999999999998764
No 224
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.91 E-value=2.6e-24 Score=224.75 Aligned_cols=157 Identities=23% Similarity=0.280 Sum_probs=135.3
Q ss_pred ccHHHHHHHhCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCC-----------chHHHHHHHHHHHHhCCCCCc
Q 046544 482 FSYLELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCG-----------RAFKSFAVECEMMKSIRHRNL 550 (646)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~e~~~l~~l~H~ni 550 (646)
....++....++|+..+.||+|+||.||+|+..+|+.||||++..... ...+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 345677788899999999999999999999988899999999864321 123678999999999999999
Q ss_pred eeEEEEEec-----CCeeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEE
Q 046544 551 IKVISSCSN-----EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL 625 (646)
Q Consensus 551 v~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~ 625 (646)
+++++++.. ....|+||||++ |++.+++...+..+++..+..++.|++.|++||| ..+|+||||||+||++
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILL 167 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEE
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEE
Confidence 999999853 346899999997 5899998877767999999999999999999999 8899999999999999
Q ss_pred cCCCcEEEEeecCcccc
Q 046544 626 DDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 626 ~~~~~~ki~DfGla~~~ 642 (646)
+.++.+||+|||+|+..
T Consensus 168 ~~~~~~kl~Dfg~~~~~ 184 (362)
T 3pg1_A 168 ADNNDITICDFNLARED 184 (362)
T ss_dssp CTTCCEEECCTTC----
T ss_pred cCCCCEEEEecCccccc
Confidence 99999999999999754
No 225
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.91 E-value=1.2e-24 Score=238.56 Aligned_cols=148 Identities=28% Similarity=0.485 Sum_probs=132.9
Q ss_pred hCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEec
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYK 570 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 570 (646)
.++|+..+.||+|+||.||+|++.++..||||+++... ...++|.+|++++++++||||+++++++.. +..++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 35688899999999999999999888889999997554 335689999999999999999999999876 6789999999
Q ss_pred CCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 571 PHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 571 ~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
++|+|.+++... +..+++.++..++.||+.||+||| .++|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 999999999753 245889999999999999999999 8899999999999999999999999999998754
No 226
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.91 E-value=2.4e-24 Score=239.63 Aligned_cols=141 Identities=27% Similarity=0.437 Sum_probs=127.7
Q ss_pred eecccccceEEEEEeC---CCcEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEecCCCC
Q 046544 499 LIGRGGFGSVYKARLG---DGMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPHGS 574 (646)
Q Consensus 499 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~g~ 574 (646)
.||+|+||.||+|.++ ++..||||+++... ....+++.+|+++++.++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999753 46779999997653 3456789999999999999999999999976 56899999999999
Q ss_pred HHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 575 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 575 L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|.+++......+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 99999877777999999999999999999999 8899999999999999999999999999998764
No 227
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.91 E-value=2e-24 Score=223.96 Aligned_cols=152 Identities=28% Similarity=0.392 Sum_probs=130.8
Q ss_pred HHHhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEecc-----CCchHHHHHHHHHHHHhCCCCCceeEEEEEecCC
Q 046544 488 CRATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ-----CGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEE 561 (646)
Q Consensus 488 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~ 561 (646)
....++|+..+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|+++++.++||||+++++++...+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 345678999999999999999999864 6889999998753 2345678899999999999999999999999999
Q ss_pred eeEEEEEecCCCCHHHHHhhC---------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 046544 562 FKALVLEYKPHGSLEKYLYSS---------------------------------------NCILDIFQRLNIMIDVASAL 602 (646)
Q Consensus 562 ~~~lv~e~~~~g~L~~~l~~~---------------------------------------~~~l~~~~~~~i~~~i~~~l 602 (646)
..++||||++||+|.+++... ...+++..+..++.|++.|+
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999999999998521 11235667788999999999
Q ss_pred HHHhcCCCCCeEecCCCCCCEEEcCCC--cEEEEeecCcccc
Q 046544 603 EYLHFGCLAPVIHCDLKPDNVLLDDNL--VAYLSDFGIAKLL 642 (646)
Q Consensus 603 ~~lH~~~~~~iiHrdlk~~Nil~~~~~--~~ki~DfGla~~~ 642 (646)
+||| ..+|+||||||+||+++.++ .+||+|||+|+.+
T Consensus 182 ~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~ 220 (345)
T 3hko_A 182 HYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEF 220 (345)
T ss_dssp HHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEG
T ss_pred HHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccc
Confidence 9999 88999999999999998766 8999999999865
No 228
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91 E-value=1.4e-24 Score=227.12 Aligned_cols=148 Identities=29% Similarity=0.489 Sum_probs=124.0
Q ss_pred CCCcceeecccccceEEEEEeC--CC--cEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEec-CCeeEEE
Q 046544 493 GFSENNLIGRGGFGSVYKARLG--DG--MEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSN-EEFKALV 566 (646)
Q Consensus 493 ~~~~~~~lg~G~~g~V~~~~~~--~~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~-~~~~~lv 566 (646)
.|...+.||+|+||.||+|++. ++ ..||+|.+.... ....+++.+|+.++++++||||+++++++.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3566789999999999999853 32 468999886543 3456789999999999999999999998754 4678999
Q ss_pred EEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 567 LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|||+++|+|.+++......+++..+..++.|+++|++||| .++|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccc
Confidence 9999999999999877777899999999999999999999 8899999999999999999999999999998653
No 229
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.91 E-value=3.9e-24 Score=220.97 Aligned_cols=145 Identities=26% Similarity=0.407 Sum_probs=127.5
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhC-CCCCceeEEEEEecCCeeEEEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSI-RHRNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e 568 (646)
.++|+..+.||+|+||.||+|+.. +|+.||+|++...... ..+|++++.++ +||||+++++++.+.+..|+|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 457899999999999999999865 6899999999765432 34688888887 79999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCC----CcEEEEeecCccccc
Q 046544 569 YKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDN----LVAYLSDFGIAKLLI 643 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~----~~~ki~DfGla~~~~ 643 (646)
|++||+|.+++...+ .+++..+..++.|++.|++||| ..+|+||||||+||++.++ +.+||+|||+|+.+.
T Consensus 97 ~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 97 LMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 999999999997654 6899999999999999999999 8899999999999998432 359999999998754
No 230
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.91 E-value=2.3e-24 Score=218.73 Aligned_cols=149 Identities=29% Similarity=0.480 Sum_probs=130.2
Q ss_pred CCCCcceeecccccceEEEEEeCC----CcEEEEEEEeccCC-chHHHHHHHHHHHHhCCCCCceeEEEEEe-cCCeeEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLGD----GMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKVISSCS-NEEFKAL 565 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~~~~~~~-~~~~~~l 565 (646)
.+|+..+.||+|+||.||+|+..+ +..||+|.+..... ...+.+.+|+.++++++||||+++++++. .++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 457888999999999999998542 34689998875433 34567899999999999999999999865 4567899
Q ss_pred EEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 566 VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||||+++|+|.+++......+++..+..++.|++.|++||| .++|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~ 179 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 179 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccccc
Confidence 99999999999999877777899999999999999999999 8899999999999999999999999999998653
No 231
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.91 E-value=4.1e-24 Score=217.69 Aligned_cols=145 Identities=29% Similarity=0.511 Sum_probs=128.9
Q ss_pred CCCCcceeecccccceEEEEEeCCCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEe
Q 046544 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 569 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 569 (646)
++|+..+.||+|+||.||+|+.. ..+|+|+++... ....+.+.+|++++++++||||+++++++. .+..++||||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~ 112 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQW 112 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred cceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEec
Confidence 67899999999999999999864 358999887543 234567899999999999999999999875 4568999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 570 KPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 570 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
+++|+|.+++......+++.++..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+..
T Consensus 113 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~ 182 (307)
T 3lb7_A 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-
T ss_pred CCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceec
Confidence 9999999999877778999999999999999999999 889999999999999999999999999999754
No 232
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.91 E-value=5.5e-24 Score=222.24 Aligned_cols=155 Identities=29% Similarity=0.443 Sum_probs=136.7
Q ss_pred HHHHHHhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC--------chHHHHHHHHHHHHhC-CCCCceeEE
Q 046544 485 LELCRATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG--------RAFKSFAVECEMMKSI-RHRNLIKVI 554 (646)
Q Consensus 485 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l-~H~niv~~~ 554 (646)
.......++|+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.+++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 334445577999999999999999999975 799999999976532 1135678899999999 899999999
Q ss_pred EEEecCCeeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEE
Q 046544 555 SSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLS 634 (646)
Q Consensus 555 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~ 634 (646)
+++...+..++||||++||+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~ 242 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLS 242 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEE
Confidence 99999999999999999999999997643 6899999999999999999999 8899999999999999999999999
Q ss_pred eecCccccc
Q 046544 635 DFGIAKLLI 643 (646)
Q Consensus 635 DfGla~~~~ 643 (646)
|||+++.+.
T Consensus 243 DfG~~~~~~ 251 (365)
T 2y7j_A 243 DFGFSCHLE 251 (365)
T ss_dssp CCTTCEECC
T ss_pred ecCcccccC
Confidence 999988764
No 233
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91 E-value=8.5e-25 Score=227.53 Aligned_cols=147 Identities=26% Similarity=0.359 Sum_probs=131.4
Q ss_pred CCCCcceeecccccceEEEEEe----CCCcEEEEEEEeccC----CchHHHHHHHHHHHHhC-CCCCceeEEEEEecCCe
Q 046544 492 NGFSENNLIGRGGFGSVYKARL----GDGMEVAVKVFNLQC----GRAFKSFAVECEMMKSI-RHRNLIKVISSCSNEEF 562 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~~ 562 (646)
++|+..+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+++++.+ +||||+++++++..++.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5789999999999999999986 368999999986432 22345567899999999 69999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 563 KALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 563 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
.++||||+++|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+|+.+
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred EEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 999999999999999997654 6889999999999999999999 889999999999999999999999999999865
No 234
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.91 E-value=9.4e-24 Score=214.06 Aligned_cols=146 Identities=20% Similarity=0.260 Sum_probs=131.9
Q ss_pred CCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccCCchHHHHHHHHHHHHhC-CCCCceeEEEEEecCCeeEEEEEe
Q 046544 492 NGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI-RHRNLIKVISSCSNEEFKALVLEY 569 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~ 569 (646)
++|+..+.||+|+||.||+|+. .+|+.||+|++.... ..+.+.+|+.+++.+ +|++++++++++......++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 5799999999999999999996 579999999987543 234577899999999 899999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCc-----EEEEeecCccccc
Q 046544 570 KPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLV-----AYLSDFGIAKLLI 643 (646)
Q Consensus 570 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~-----~ki~DfGla~~~~ 643 (646)
+ +++|.+++...+..+++..+..++.|++.|++||| .++|+||||||+||+++.++. +||+|||+|+.+.
T Consensus 88 ~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 88 L-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred c-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 9 99999999887767999999999999999999999 899999999999999987765 9999999998764
No 235
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.91 E-value=4.4e-24 Score=214.01 Aligned_cols=149 Identities=30% Similarity=0.458 Sum_probs=134.6
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALV 566 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv 566 (646)
.++|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 367899999999999999999975 79999999987542 23356788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 567 LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|||+++++|.+++.... .+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccC
Confidence 99999999999997654 5889999999999999999999 8899999999999999999999999999998754
No 236
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.91 E-value=6.6e-24 Score=213.56 Aligned_cols=148 Identities=28% Similarity=0.398 Sum_probs=133.0
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC------chHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG------RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKA 564 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~ 564 (646)
++|+..+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46888999999999999999976 699999999875431 23578899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCC----cEEEEeecCcc
Q 046544 565 LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNL----VAYLSDFGIAK 640 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~----~~ki~DfGla~ 640 (646)
+||||+++++|.+++.... .+++..+..++.|++.|++||| ..+|+||||||+||+++.++ .+||+|||+++
T Consensus 85 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 9999999999999997643 6899999999999999999999 88999999999999998776 89999999998
Q ss_pred ccc
Q 046544 641 LLI 643 (646)
Q Consensus 641 ~~~ 643 (646)
.+.
T Consensus 161 ~~~ 163 (283)
T 3bhy_A 161 KIE 163 (283)
T ss_dssp ECC
T ss_pred ecc
Confidence 653
No 237
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.91 E-value=1e-23 Score=213.40 Aligned_cols=149 Identities=28% Similarity=0.400 Sum_probs=130.9
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEec
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYK 570 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 570 (646)
+.|.....||+|+||.||+|+.. +++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 34566679999999999999964 68899999998776666678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcC-CCcEEEEeecCccccc
Q 046544 571 PHGSLEKYLYSSN--CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD-NLVAYLSDFGIAKLLI 643 (646)
Q Consensus 571 ~~g~L~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~-~~~~ki~DfGla~~~~ 643 (646)
++++|.+++.... ...++..+..++.|++.|++||| ..+|+||||||+||+++. ++.+||+|||+++...
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~ 174 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence 9999999998653 24568888899999999999999 889999999999999987 8999999999998654
No 238
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.91 E-value=4.4e-24 Score=213.96 Aligned_cols=148 Identities=24% Similarity=0.350 Sum_probs=134.1
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 568 (646)
.++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467899999999999999999975 68999999997553 3445778899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 569 YKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
|+++++|.+++... ..+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+++.+
T Consensus 86 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 155 (276)
T 2yex_A 86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVF 155 (276)
T ss_dssp CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred ecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence 99999999998654 36889999999999999999999 889999999999999999999999999998754
No 239
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.91 E-value=3.1e-24 Score=218.05 Aligned_cols=149 Identities=26% Similarity=0.424 Sum_probs=132.6
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEec----------
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN---------- 559 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~---------- 559 (646)
.++|+..+.||+|+||.||+|+.. +|+.||+|++... ....+.+.+|+++++.++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 457889999999999999999964 7999999998643 2345678899999999999999999998764
Q ss_pred ---CCeeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEee
Q 046544 560 ---EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDF 636 (646)
Q Consensus 560 ---~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~Df 636 (646)
.+..++||||+++|+|.+++...+..+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeC
Confidence 35689999999999999999877667788899999999999999999 889999999999999999999999999
Q ss_pred cCccccc
Q 046544 637 GIAKLLI 643 (646)
Q Consensus 637 Gla~~~~ 643 (646)
|+++...
T Consensus 161 g~~~~~~ 167 (303)
T 1zy4_A 161 GLAKNVH 167 (303)
T ss_dssp CCCSCTT
T ss_pred cchhhcc
Confidence 9998653
No 240
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.91 E-value=7.4e-24 Score=231.12 Aligned_cols=149 Identities=26% Similarity=0.430 Sum_probs=130.5
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC-------------chHHHHHHHHHHHHhCCCCCceeEEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG-------------RAFKSFAVECEMMKSIRHRNLIKVISS 556 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~H~niv~~~~~ 556 (646)
.++|...+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+.+++.++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 468999999999999999999965 688999999875421 234678899999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCC---cEEE
Q 046544 557 CSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNL---VAYL 633 (646)
Q Consensus 557 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~---~~ki 633 (646)
+...+..|+|||||+||+|.+++.... .+++..+..++.|++.|++||| ..+|+||||||+||+++.++ .+||
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl 190 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKI 190 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEEE
Confidence 999999999999999999999987654 6899999999999999999999 88999999999999998765 6999
Q ss_pred EeecCccccc
Q 046544 634 SDFGIAKLLI 643 (646)
Q Consensus 634 ~DfGla~~~~ 643 (646)
+|||+|+.+.
T Consensus 191 ~Dfg~a~~~~ 200 (504)
T 3q5i_A 191 VDFGLSSFFS 200 (504)
T ss_dssp CCCTTCEECC
T ss_pred EECCCCEEcC
Confidence 9999998764
No 241
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.91 E-value=8.2e-24 Score=214.57 Aligned_cols=150 Identities=27% Similarity=0.411 Sum_probs=134.1
Q ss_pred HhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC---------chHHHHHHHHHHHHhCC-CCCceeEEEEEe
Q 046544 490 ATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG---------RAFKSFAVECEMMKSIR-HRNLIKVISSCS 558 (646)
Q Consensus 490 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---------~~~~~~~~e~~~l~~l~-H~niv~~~~~~~ 558 (646)
..++|+..+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3478999999999999999999975 689999999975431 22356788999999995 999999999999
Q ss_pred cCCeeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecC
Q 046544 559 NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGI 638 (646)
Q Consensus 559 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGl 638 (646)
..+..++||||+++++|.+++.... .+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccc
Confidence 9999999999999999999997653 6889999999999999999999 88999999999999999999999999999
Q ss_pred ccccc
Q 046544 639 AKLLI 643 (646)
Q Consensus 639 a~~~~ 643 (646)
++.+.
T Consensus 171 ~~~~~ 175 (298)
T 1phk_A 171 SCQLD 175 (298)
T ss_dssp CEECC
T ss_pred hhhcC
Confidence 98653
No 242
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.91 E-value=4.2e-24 Score=239.92 Aligned_cols=149 Identities=23% Similarity=0.252 Sum_probs=133.5
Q ss_pred HhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEecc---CCchHHHHHHHHHHHHhC-CCCCceeEEEEEecCCeeE
Q 046544 490 ATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ---CGRAFKSFAVECEMMKSI-RHRNLIKVISSCSNEEFKA 564 (646)
Q Consensus 490 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~~~~ 564 (646)
..++|+..+.||+|+||+||+|+.. +++.||||+++.. .....+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4468999999999999999999965 6889999999754 233456778899999987 7999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 565 LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
+||||++||+|.+++...+ .+++..+..++.||+.||+||| ..+||||||||+|||++.++.+||+|||+|+..
T Consensus 419 lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 9999999999999998754 6899999999999999999999 889999999999999999999999999999864
No 243
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.91 E-value=8.6e-24 Score=216.57 Aligned_cols=145 Identities=31% Similarity=0.516 Sum_probs=129.8
Q ss_pred CCcceeecccccceEEEEEeC-----CCcEEEEEEEeccCC-chHHHHHHHHHHHHhCCCCCceeEEEEEecC--CeeEE
Q 046544 494 FSENNLIGRGGFGSVYKARLG-----DGMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKVISSCSNE--EFKAL 565 (646)
Q Consensus 494 ~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~--~~~~l 565 (646)
|+..+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|++++++++||||+++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488999999999999988642 688999999986543 3456789999999999999999999999874 57899
Q ss_pred EEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 566 VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||||+++|+|.+++.... +++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 113 v~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 999999999999997654 889999999999999999999 8899999999999999999999999999998764
No 244
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.91 E-value=1.1e-23 Score=214.29 Aligned_cols=147 Identities=29% Similarity=0.392 Sum_probs=133.9
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEe
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 569 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 569 (646)
+.|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 56888999999999999999864 68999999998654 34567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 570 KPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 570 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
+++++|.+++... .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++.+.
T Consensus 102 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 170 (303)
T 3a7i_A 102 LGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170 (303)
T ss_dssp CTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECB
T ss_pred CCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecC
Confidence 9999999998653 5899999999999999999999 8899999999999999999999999999997654
No 245
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91 E-value=9.6e-24 Score=218.01 Aligned_cols=146 Identities=31% Similarity=0.453 Sum_probs=126.7
Q ss_pred HHhCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhC--CCCCceeEEEEEecC----Ce
Q 046544 489 RATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI--RHRNLIKVISSCSNE----EF 562 (646)
Q Consensus 489 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~H~niv~~~~~~~~~----~~ 562 (646)
...++|+..+.||+|+||.||+|+.. |+.||||++.... ...+.+|.+++... +||||+++++++... ..
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 34468999999999999999999985 8999999986432 23445566666554 999999999999877 68
Q ss_pred eEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC--------CeEecCCCCCCEEEcCCCcEEEE
Q 046544 563 KALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA--------PVIHCDLKPDNVLLDDNLVAYLS 634 (646)
Q Consensus 563 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~--------~iiHrdlk~~Nil~~~~~~~ki~ 634 (646)
.++||||+++|+|.+++... .+++..+..++.|++.|++||| .. +|+||||||+||+++.++.+||+
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~ 184 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred eEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence 89999999999999999765 4889999999999999999999 66 99999999999999999999999
Q ss_pred eecCccccc
Q 046544 635 DFGIAKLLI 643 (646)
Q Consensus 635 DfGla~~~~ 643 (646)
|||+|+.+.
T Consensus 185 Dfg~a~~~~ 193 (337)
T 3mdy_A 185 DLGLAVKFI 193 (337)
T ss_dssp CCTTCEECC
T ss_pred eCCCceeec
Confidence 999997653
No 246
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.91 E-value=1.5e-23 Score=213.54 Aligned_cols=192 Identities=23% Similarity=0.369 Sum_probs=150.6
Q ss_pred CcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecC
Q 046544 164 LKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGG 243 (646)
Q Consensus 164 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 243 (646)
|++|++++|.+... | .+..+++|++|++++|++.+..+ +..+++|++|++++|++++. ..+..+++|++|++++
T Consensus 43 L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~ 116 (308)
T 1h6u_A 43 ITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTS 116 (308)
T ss_dssp CCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTT
T ss_pred cCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCC
Confidence 44444444444432 2 46777888888888888876655 78888888888888888753 3688888888888888
Q ss_pred CcccccCCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCcc
Q 046544 244 NKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPT 323 (646)
Q Consensus 244 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~ 323 (646)
|++++.. .+..+++|+.|++++|.++.++. +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+
T Consensus 117 n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~- 190 (308)
T 1h6u_A 117 TQITDVT--PLAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP- 190 (308)
T ss_dssp SCCCCCG--GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-
T ss_pred CCCCCch--hhcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh-
Confidence 8887643 27888888888888888888775 7788888888888888886444 8888999999999999987654
Q ss_pred ccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCc
Q 046544 324 EIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPT 371 (646)
Q Consensus 324 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 371 (646)
+..+++|++|++++|++++..+ +..+++|+.|+|++|++++ .|.
T Consensus 191 -l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~-~~~ 234 (308)
T 1h6u_A 191 -LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN-QPV 234 (308)
T ss_dssp -GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC-CCE
T ss_pred -hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec-CCe
Confidence 8889999999999999986653 8999999999999999984 443
No 247
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.91 E-value=3.4e-24 Score=223.66 Aligned_cols=159 Identities=28% Similarity=0.332 Sum_probs=137.6
Q ss_pred ccccHHHHHHHhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCC-----CCCceeE
Q 046544 480 RTFSYLELCRATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR-----HRNLIKV 553 (646)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----H~niv~~ 553 (646)
..+++.+.....++|+..+.||+|+||.||+|+.. +++.||||++... ....+.+..|+++++.++ ||||+++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 44555555556689999999999999999999974 6899999998643 233456778999999986 9999999
Q ss_pred EEEEecCCeeEEEEEecCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcC-----
Q 046544 554 ISSCSNEEFKALVLEYKPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD----- 627 (646)
Q Consensus 554 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~----- 627 (646)
++++...+..++||||+ +++|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||+++.
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~ 177 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEK 177 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCE
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccccc
Confidence 99999999999999999 889999998654 35889999999999999999999 889999999999999975
Q ss_pred --------------------CCcEEEEeecCccccc
Q 046544 628 --------------------NLVAYLSDFGIAKLLI 643 (646)
Q Consensus 628 --------------------~~~~ki~DfGla~~~~ 643 (646)
++.+||+|||+|+...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~ 213 (360)
T 3llt_A 178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKS 213 (360)
T ss_dssp EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETT
T ss_pred cccchhcccccccccccccCCCCEEEEeccCceecC
Confidence 7899999999998653
No 248
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.91 E-value=2e-24 Score=225.66 Aligned_cols=149 Identities=21% Similarity=0.325 Sum_probs=126.1
Q ss_pred hCCCCcceeecccccceEEEEEeCC------CcEEEEEEEeccCCch-----------HHHHHHHHHHHHhCCCCCceeE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLGD------GMEVAVKVFNLQCGRA-----------FKSFAVECEMMKSIRHRNLIKV 553 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~H~niv~~ 553 (646)
.++|+..+.||+|+||.||+|++.. ++.||||++....... ...+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 3579999999999999999998754 4789999987554211 1123446667778899999999
Q ss_pred EEEEecC----CeeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEc--C
Q 046544 554 ISSCSNE----EFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLD--D 627 (646)
Q Consensus 554 ~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~--~ 627 (646)
++++... ...++||||+ |++|.+++......+++..+..++.|++.||+||| ..+|+||||||+||+++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecCC
Confidence 9998765 4589999999 99999999887678999999999999999999999 88999999999999998 8
Q ss_pred CCcEEEEeecCccccc
Q 046544 628 NLVAYLSDFGIAKLLI 643 (646)
Q Consensus 628 ~~~~ki~DfGla~~~~ 643 (646)
++.+||+|||+|+.+.
T Consensus 190 ~~~~kl~DFG~a~~~~ 205 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYC 205 (364)
T ss_dssp TTCEEECCCTTCEESS
T ss_pred CCeEEEEECCcceecc
Confidence 8999999999997653
No 249
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.91 E-value=6.2e-24 Score=223.95 Aligned_cols=147 Identities=22% Similarity=0.402 Sum_probs=122.3
Q ss_pred HhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCC-CCCceeEEEEEecCC--ee
Q 046544 490 ATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIR-HRNLIKVISSCSNEE--FK 563 (646)
Q Consensus 490 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-H~niv~~~~~~~~~~--~~ 563 (646)
..++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.+++.+. ||||+++++++..++ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4578999999999999999999864 79999999986442 334567889999999997 999999999997654 68
Q ss_pred EEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 564 ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 564 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
|+|||||+ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+.+
T Consensus 87 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 99999997 5899998764 5889999999999999999999 889999999999999999999999999999865
No 250
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.91 E-value=4.9e-24 Score=220.80 Aligned_cols=147 Identities=23% Similarity=0.368 Sum_probs=130.8
Q ss_pred hCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCC--chHHHHHHHHHHHHhCCC--CCceeEEEEEecCCeeEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCG--RAFKSFAVECEMMKSIRH--RNLIKVISSCSNEEFKALV 566 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~H--~niv~~~~~~~~~~~~~lv 566 (646)
.++|+..+.||+|+||.||+|...+++.||||++..... ...+.+.+|+++++.++| |||+++++++..++..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 356889999999999999999988899999999975532 344678899999999976 9999999999999999999
Q ss_pred EEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 567 LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||| .+|+|.+++.... .+++.++..++.|++.||+||| ..+|+||||||+||+++ ++.+||+|||+|+.+.
T Consensus 88 ~e~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp ECC-CSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred EeC-CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 995 5889999998754 6889999999999999999999 88999999999999997 5789999999998753
No 251
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.91 E-value=6.7e-24 Score=213.68 Aligned_cols=147 Identities=29% Similarity=0.433 Sum_probs=132.6
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 57889999999999999999875 68899999987532 223467889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
||+++|+|.+++...+ .+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 94 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 164 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHA 164 (284)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccC
Confidence 9999999999997654 5889999999999999999999 889999999999999999999999999998754
No 252
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.91 E-value=4.5e-24 Score=213.29 Aligned_cols=146 Identities=30% Similarity=0.486 Sum_probs=122.1
Q ss_pred CCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCC----chHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCG----RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
++|+..+.||+|+||.||+|++. |+.||+|++..... ...+.+.+|+++++.++||||+++++++..++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 57889999999999999999974 88999999865432 23467889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC---eEecCCCCCCEEEcC--------CCcEEEEee
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP---VIHCDLKPDNVLLDD--------NLVAYLSDF 636 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~---iiHrdlk~~Nil~~~--------~~~~ki~Df 636 (646)
||+++++|.+++... .+++..+..++.|++.|++||| ..+ |+||||||+||+++. ++.+||+||
T Consensus 86 e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp ECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999998643 6899999999999999999999 666 999999999999985 678999999
Q ss_pred cCccccc
Q 046544 637 GIAKLLI 643 (646)
Q Consensus 637 Gla~~~~ 643 (646)
|+|+.+.
T Consensus 161 g~~~~~~ 167 (271)
T 3dtc_A 161 GLAREWH 167 (271)
T ss_dssp CC-----
T ss_pred Ccccccc
Confidence 9998653
No 253
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.91 E-value=4.9e-24 Score=231.95 Aligned_cols=148 Identities=24% Similarity=0.386 Sum_probs=128.0
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 568 (646)
++|+..+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 46889999999999999999975 68999999997553 2345678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcC---CCcEEEEeecCccccc
Q 046544 569 YKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAKLLI 643 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~---~~~~ki~DfGla~~~~ 643 (646)
||++|+|.+++.... .+++..+..++.|++.|++||| ..+|+||||||+||+++. ++.+||+|||+|+.+.
T Consensus 117 ~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 117 CYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp CCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 999999999887654 6889999999999999999999 889999999999999975 4569999999998754
No 254
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.90 E-value=4.7e-24 Score=231.68 Aligned_cols=148 Identities=26% Similarity=0.430 Sum_probs=133.8
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56889999999999999999975 79999999997543 334678899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEE---cCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~---~~~~~~ki~DfGla~~~~ 643 (646)
||+++|+|.+++...+ .+++..+..++.|++.|++||| ..+|+||||||+||++ +.++.+||+|||+|+.+.
T Consensus 106 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 106 EVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp CCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 9999999999987654 6899999999999999999999 8899999999999999 467899999999998754
No 255
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.90 E-value=9.1e-24 Score=215.95 Aligned_cols=149 Identities=30% Similarity=0.395 Sum_probs=130.1
Q ss_pred HhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEE
Q 046544 490 ATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 490 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 568 (646)
..++|+..+.||+|+||.||+|+.. +|+.||+|++.... ..+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 3467999999999999999999875 58999999997653 34678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 569 YKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|+++|+|.+++......+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++.+.
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 99999999999765567899999999999999999999 8899999999999999999999999999997653
No 256
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.90 E-value=1.1e-23 Score=214.80 Aligned_cols=150 Identities=29% Similarity=0.460 Sum_probs=126.6
Q ss_pred HhCCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccC-----CchHHHHHHHHHHHHhC---CCCCceeEEEEEecC
Q 046544 490 ATNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC-----GRAFKSFAVECEMMKSI---RHRNLIKVISSCSNE 560 (646)
Q Consensus 490 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l---~H~niv~~~~~~~~~ 560 (646)
..++|+..+.||+|+||+||+|+. .+|+.||+|++.... ......+.+|+++++.+ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999999996 478999999987432 11234667788877766 499999999999876
Q ss_pred C-----eeEEEEEecCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEE
Q 046544 561 E-----FKALVLEYKPHGSLEKYLYSSNC-ILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLS 634 (646)
Q Consensus 561 ~-----~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~ 634 (646)
. ..++||||+. |+|.+++..... .+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEe
Confidence 4 5799999996 599999977643 4899999999999999999999 8899999999999999999999999
Q ss_pred eecCccccc
Q 046544 635 DFGIAKLLI 643 (646)
Q Consensus 635 DfGla~~~~ 643 (646)
|||+|+...
T Consensus 163 Dfg~a~~~~ 171 (308)
T 3g33_A 163 DFGLARIYS 171 (308)
T ss_dssp SCSCTTTST
T ss_pred eCccccccC
Confidence 999998654
No 257
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.90 E-value=3.5e-24 Score=227.90 Aligned_cols=150 Identities=26% Similarity=0.338 Sum_probs=128.3
Q ss_pred HHhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC--------CchHHHHHHHHHHHHhCCCCCceeEEEEEec
Q 046544 489 RATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--------GRAFKSFAVECEMMKSIRHRNLIKVISSCSN 559 (646)
Q Consensus 489 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~ 559 (646)
...++|...+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34578999999999999999999865 68999999987542 1122357889999999999999999999864
Q ss_pred CCeeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCC---CcEEEEee
Q 046544 560 EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDN---LVAYLSDF 636 (646)
Q Consensus 560 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~---~~~ki~Df 636 (646)
+..++||||+++|+|.+++...+ .+++..+..++.|++.|++||| +++|+||||||+||+++.+ +.+||+||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred -CceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeec
Confidence 45799999999999999887554 6899999999999999999999 8899999999999999654 45999999
Q ss_pred cCccccc
Q 046544 637 GIAKLLI 643 (646)
Q Consensus 637 Gla~~~~ 643 (646)
|+|+.+.
T Consensus 287 G~a~~~~ 293 (419)
T 3i6u_A 287 GHSKILG 293 (419)
T ss_dssp STTTSCC
T ss_pred ccceecC
Confidence 9998764
No 258
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.90 E-value=4.6e-24 Score=217.11 Aligned_cols=148 Identities=24% Similarity=0.392 Sum_probs=130.8
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEe
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 569 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 569 (646)
.++|...+.||+|+||.||+|+.. +|+.||+|++........+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 357889999999999999999975 7999999999866544456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEE---cCCCcEEEEeecCcccc
Q 046544 570 KPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 570 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~---~~~~~~ki~DfGla~~~ 642 (646)
+++++|.+++...+ .+++..+..++.|++.|++||| ..+|+||||||+||++ +.++.+||+|||+++..
T Consensus 88 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 88 VSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp CCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred CCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 99999999987654 6889999999999999999999 8899999999999999 77889999999998764
No 259
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.90 E-value=6.4e-24 Score=220.72 Aligned_cols=149 Identities=26% Similarity=0.427 Sum_probs=131.5
Q ss_pred hCCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccCC--chHHHHHHHHHHHHhCCCCCceeEEEEEecC-------
Q 046544 491 TNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RAFKSFAVECEMMKSIRHRNLIKVISSCSNE------- 560 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~------- 560 (646)
.++|+..+.||+|+||.||+|+. .+|+.||+|++..... .....+.+|+++++.++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36789999999999999999997 4799999999865432 2345778999999999999999999998873
Q ss_pred -CeeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCc
Q 046544 561 -EFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639 (646)
Q Consensus 561 -~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla 639 (646)
+..++||||+++ ++.+.+......+++.++..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+|
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 468999999975 888888777667999999999999999999999 889999999999999999999999999999
Q ss_pred cccc
Q 046544 640 KLLI 643 (646)
Q Consensus 640 ~~~~ 643 (646)
+.+.
T Consensus 172 ~~~~ 175 (351)
T 3mi9_A 172 RAFS 175 (351)
T ss_dssp EECC
T ss_pred cccc
Confidence 8653
No 260
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.90 E-value=4.7e-24 Score=216.30 Aligned_cols=147 Identities=25% Similarity=0.430 Sum_probs=129.3
Q ss_pred CCCcceeecccccceEEEEEeC-C---CcEEEEEEEeccCC-chHHHHHHHHHHHHhCCCCCceeEEEEEecCCee-EEE
Q 046544 493 GFSENNLIGRGGFGSVYKARLG-D---GMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFK-ALV 566 (646)
Q Consensus 493 ~~~~~~~lg~G~~g~V~~~~~~-~---~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~-~lv 566 (646)
.|...+.||+|+||.||+|++. + +..||+|++..... ...+.+.+|+++++.++||||+++++++...+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4556689999999999999853 2 33799999875433 3456789999999999999999999999876655 999
Q ss_pred EEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 567 LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
|||+.+|+|.+++......+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+.+
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 9999999999999887777899999999999999999999 889999999999999999999999999999755
No 261
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.90 E-value=2.1e-24 Score=222.72 Aligned_cols=152 Identities=26% Similarity=0.404 Sum_probs=133.3
Q ss_pred HHhCCCCcceeecccccceEEEEEeC-C-----CcEEEEEEEeccCC-chHHHHHHHHHHHHhC-CCCCceeEEEEEecC
Q 046544 489 RATNGFSENNLIGRGGFGSVYKARLG-D-----GMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRNLIKVISSCSNE 560 (646)
Q Consensus 489 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~-----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~ 560 (646)
...++|+..+.||+|+||.||+|+.. + ++.||+|++..... ...+.+.+|+++++.+ +||||+++++++...
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 122 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence 34578999999999999999999864 2 34799999976543 3456788999999999 899999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHhhC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcC
Q 046544 561 EFKALVLEYKPHGSLEKYLYSS-------------NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD 627 (646)
Q Consensus 561 ~~~~lv~e~~~~g~L~~~l~~~-------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~ 627 (646)
+..++||||+++|+|.+++... ...+++..+..++.|++.||+||| ..+|+||||||+||+++.
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTN 199 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEG
T ss_pred CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECC
Confidence 9999999999999999998753 235789999999999999999999 889999999999999999
Q ss_pred CCcEEEEeecCccccc
Q 046544 628 NLVAYLSDFGIAKLLI 643 (646)
Q Consensus 628 ~~~~ki~DfGla~~~~ 643 (646)
++.+||+|||+|+.+.
T Consensus 200 ~~~~kl~Dfg~~~~~~ 215 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIM 215 (333)
T ss_dssp GGEEEBCCCGGGCCGG
T ss_pred CCeEEECccccccccc
Confidence 9999999999998653
No 262
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.90 E-value=6.8e-24 Score=211.84 Aligned_cols=147 Identities=22% Similarity=0.415 Sum_probs=131.7
Q ss_pred CCCCcceeecccccceEEEEEeCCCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecC--CeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNE--EFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~--~~~~lv~ 567 (646)
++|+..+.||+|+||.||+|+++ ++.||+|++.... ....+.+.+|+.+++.++||||+++++++... +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 57889999999999999999984 8899999997653 23456789999999999999999999999887 7789999
Q ss_pred EecCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 568 EYKPHGSLEKYLYSSNC-ILDIFQRLNIMIDVASALEYLHFGCLAP--VIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~i~~~l~~lH~~~~~~--iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
||+++|+|.+++..... .+++..+..++.|++.|++||| ..+ |+||||||+||+++.++.++++|||++...
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 99999999999987653 5899999999999999999999 777 999999999999999999999999887543
No 263
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.90 E-value=5.2e-24 Score=231.30 Aligned_cols=148 Identities=26% Similarity=0.414 Sum_probs=132.8
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 568 (646)
++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..|+|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 57899999999999999999975 79999999987432 3345778999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEc---CCCcEEEEeecCccccc
Q 046544 569 YKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLD---DNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~---~~~~~ki~DfGla~~~~ 643 (646)
||++|+|.+++...+ .+++..+..++.|++.|+.||| ..+|+||||||+||+++ .++.+||+|||+|+.+.
T Consensus 102 ~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 102 LYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp CCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred cCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 999999999887654 6899999999999999999999 88999999999999995 45689999999998654
No 264
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.90 E-value=5.9e-24 Score=216.98 Aligned_cols=149 Identities=29% Similarity=0.449 Sum_probs=126.8
Q ss_pred CCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccC---CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
.+|+..+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 5789999999999999999986 479999999997532 234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||+++|+|.+++.. ....+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 99999999999864 3456899999999999999999999 8899999999999999999999999999987653
No 265
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.90 E-value=5.8e-24 Score=216.91 Aligned_cols=151 Identities=24% Similarity=0.301 Sum_probs=130.9
Q ss_pred HHhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC---chHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeE
Q 046544 489 RATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKA 564 (646)
Q Consensus 489 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~ 564 (646)
...++|+..+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+.+++.++||||+++++++..++..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 33478999999999999999999965 689999999875432 23467889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 565 LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
+||||+++++|.+++...+ .+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 111 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 9999999999999997654 6889999999999999999999 8899999999999999999999999999987653
No 266
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.90 E-value=3e-24 Score=219.73 Aligned_cols=159 Identities=25% Similarity=0.414 Sum_probs=136.4
Q ss_pred ccHHHHHHHhCCCCcceeecccccceEEEEEe------CCCcEEEEEEEeccCC-chHHHHHHHHHHHHhC-CCCCceeE
Q 046544 482 FSYLELCRATNGFSENNLIGRGGFGSVYKARL------GDGMEVAVKVFNLQCG-RAFKSFAVECEMMKSI-RHRNLIKV 553 (646)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~H~niv~~ 553 (646)
+...++....++|+..+.||+|+||.||+|++ .+++.||+|++..... ...+.+.+|+++++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 33445555567899999999999999999974 3568899999976543 3446788999999999 79999999
Q ss_pred EEEEecCC-eeEEEEEecCCCCHHHHHhhCCCC---------------CCHHHHHHHHHHHHHHHHHHhcCCCCCeEecC
Q 046544 554 ISSCSNEE-FKALVLEYKPHGSLEKYLYSSNCI---------------LDIFQRLNIMIDVASALEYLHFGCLAPVIHCD 617 (646)
Q Consensus 554 ~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~---------------l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrd 617 (646)
++++...+ ..++||||+++|+|.+++...... +++..+..++.|++.|++||| ..+|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCccccc
Confidence 99988764 589999999999999999865432 788999999999999999999 88999999
Q ss_pred CCCCCEEEcCCCcEEEEeecCccccc
Q 046544 618 LKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 618 lk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|||+||+++.++.+||+|||+|+.+.
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~ 199 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIY 199 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred CccceEEECCCCCEEECCCccccccc
Confidence 99999999999999999999998653
No 267
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.90 E-value=6.9e-24 Score=218.61 Aligned_cols=148 Identities=28% Similarity=0.450 Sum_probs=129.8
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCc--hHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGR--AFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 568 (646)
++|+..+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 57889999999999999999975 5899999998755432 34567889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 569 YKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|++++++.++.... ..+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 105 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 105 FVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp CCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred cCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 99998888876544 36899999999999999999999 8899999999999999999999999999997653
No 268
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.90 E-value=4e-24 Score=223.14 Aligned_cols=147 Identities=22% Similarity=0.330 Sum_probs=133.0
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC-chHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEe
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 569 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 569 (646)
++|+..+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 56889999999999999999975 689999999986533 3456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 570 KPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA-PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 570 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
+++|+|.+++...+ .+++..+..++.|++.|++||| .. +|+||||||+||+++.++.+||+|||+|+.+
T Consensus 113 ~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 182 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 182 (360)
T ss_dssp CTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred CCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCccc
Confidence 99999999997654 5889999999999999999999 64 8999999999999999999999999998753
No 269
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.90 E-value=3.5e-24 Score=220.55 Aligned_cols=150 Identities=25% Similarity=0.427 Sum_probs=128.1
Q ss_pred HHhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC--chHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEE
Q 046544 489 RATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG--RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKAL 565 (646)
Q Consensus 489 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~l 565 (646)
...++|+..+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+++++.++||||+++++++..++..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 44568999999999999999999864 789999999875432 234567789999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEc-----CCCcEEEEeecCcc
Q 046544 566 VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLD-----DNLVAYLSDFGIAK 640 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~-----~~~~~ki~DfGla~ 640 (646)
||||+++ +|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++ ..+.+||+|||+|+
T Consensus 111 v~e~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 111 IFEYAEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EEECCSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EEecCCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 9999975 9999997765 5899999999999999999999 88999999999999994 55569999999997
Q ss_pred ccc
Q 046544 641 LLI 643 (646)
Q Consensus 641 ~~~ 643 (646)
.+.
T Consensus 186 ~~~ 188 (329)
T 3gbz_A 186 AFG 188 (329)
T ss_dssp HHC
T ss_pred ccC
Confidence 653
No 270
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.90 E-value=4.9e-24 Score=214.34 Aligned_cols=149 Identities=26% Similarity=0.455 Sum_probs=130.8
Q ss_pred hCCCCcceeecccccceEEEEEeCC----CcEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLGD----GMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKAL 565 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~l 565 (646)
.++|...+.||+|+||.||+|++.. +..||+|++.... ....+.+.+|+++++.++||||+++++++.. +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 3678899999999999999998532 3469999987653 2345678999999999999999999999865 45789
Q ss_pred EEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 566 VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||||+++++|.+++...+..+++..+..++.|++.|++||| .++|+||||||+||+++.++.+||+|||+++...
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 164 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 164 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcccc
Confidence 99999999999999876667899999999999999999999 8899999999999999999999999999998654
No 271
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.90 E-value=1.3e-23 Score=218.18 Aligned_cols=182 Identities=14% Similarity=0.069 Sum_probs=105.9
Q ss_pred cCcEEEeecccccccCCcccccCCCCCEEEccCCccccc-cCccccCCCCCCe-EEeecccccCcCchhhcCCCCCcEEE
Q 046544 163 SLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGS-IPITLSKLQKLQG-LGLDDNKLEGSIPDSICRLTELYELE 240 (646)
Q Consensus 163 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~-L~L~~N~l~~~~~~~~~~l~~L~~L~ 240 (646)
++++|+|++|+|+.+.+++|.++++|++|+|++|++.+. .+.+|.+++++++ +.++.|+|+.+.|++|..+++|++|+
T Consensus 31 ~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~ 110 (350)
T 4ay9_X 31 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 110 (350)
T ss_dssp TCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEE
T ss_pred CCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccccc
Confidence 455555555555555556677777777777777776443 3456677766654 45556777766677777777777777
Q ss_pred ecCCcccccCCccccCCCCCceeecCC-Cccccccc-cccccc-ccccccCCCCcccCCCCCccCccccceEEEccc-cc
Q 046544 241 LGGNKLFGSIPACFSNLASLRILSLSS-NELTSIPL-TFWNLK-DILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSM-NN 316 (646)
Q Consensus 241 L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~lp~-~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~-N~ 316 (646)
+++|++....+..+....++..|++++ |.+..+|. .|..+. .++.|++++|.|+.+.+..| ...+|+.+++++ |.
T Consensus 111 l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~ 189 (350)
T 4ay9_X 111 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNN 189 (350)
T ss_dssp EEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTT
T ss_pred ccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCCc
Confidence 777777666666666666666676644 45666654 233332 35555555555553322222 334455555543 44
Q ss_pred ccccCccccCCCCCCCEEEccCccCCCcc
Q 046544 317 FSSVIPTEIGGLKNLEYLFLGYNRLEGSI 345 (646)
Q Consensus 317 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 345 (646)
++.+.+..|+++++|++|+|++|+|+..+
T Consensus 190 l~~i~~~~f~~l~~L~~LdLs~N~l~~lp 218 (350)
T 4ay9_X 190 LEELPNDVFHGASGPVILDISRTRIHSLP 218 (350)
T ss_dssp CCCCCTTTTTTEECCSEEECTTSCCCCCC
T ss_pred ccCCCHHHhccCcccchhhcCCCCcCccC
Confidence 44444445555555555555555555333
No 272
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.90 E-value=4.9e-24 Score=215.27 Aligned_cols=146 Identities=27% Similarity=0.476 Sum_probs=124.1
Q ss_pred hCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 568 (646)
.++|+..+.||+|+||.||+|+.. ..||+|++.... ....+.+.+|+++++.++||||+++++++ ..+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 367999999999999999999864 359999987554 23456789999999999999999999965 4556899999
Q ss_pred ecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 569 YKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
|+++++|.+++......+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+..
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccc
Confidence 99999999999877778999999999999999999999 889999999999999999999999999998754
No 273
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.90 E-value=8.1e-24 Score=223.51 Aligned_cols=144 Identities=22% Similarity=0.340 Sum_probs=123.7
Q ss_pred CCCCcc-eeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHH-HhCCCCCceeEEEEEec----CCeeE
Q 046544 492 NGFSEN-NLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMM-KSIRHRNLIKVISSCSN----EEFKA 564 (646)
Q Consensus 492 ~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~H~niv~~~~~~~~----~~~~~ 564 (646)
++|... +.||+|+||+||+|+.. +|+.||||++... ..+.+|++++ +..+||||+++++++.. .+..|
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456555 78999999999999865 6899999998632 4567788887 45589999999998875 56789
Q ss_pred EEEEecCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcC---CCcEEEEeecCcc
Q 046544 565 LVLEYKPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAK 640 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~---~~~~ki~DfGla~ 640 (646)
+|||||+||+|.+++.... ..+++..+..++.|++.||+||| ..+|+||||||+||+++. ++.+||+|||+|+
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999999998754 36899999999999999999999 889999999999999987 7899999999998
Q ss_pred ccc
Q 046544 641 LLI 643 (646)
Q Consensus 641 ~~~ 643 (646)
...
T Consensus 213 ~~~ 215 (400)
T 1nxk_A 213 ETT 215 (400)
T ss_dssp ECC
T ss_pred ccC
Confidence 654
No 274
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.90 E-value=9e-24 Score=217.35 Aligned_cols=147 Identities=35% Similarity=0.616 Sum_probs=129.2
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcE--EEEEEEeccC-CchHHHHHHHHHHHHhC-CCCCceeEEEEEecCCeeEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGME--VAVKVFNLQC-GRAFKSFAVECEMMKSI-RHRNLIKVISSCSNEEFKALV 566 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~--vavK~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~~~~lv 566 (646)
++|+..+.||+|+||.||+|+.. +|.. ||+|.+.... ....+.+.+|+++++++ +||||+++++++..++..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 57889999999999999999854 5664 4999887532 33456788999999999 999999999999999999999
Q ss_pred EEecCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcE
Q 046544 567 LEYKPHGSLEKYLYSSN---------------CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVA 631 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ 631 (646)
|||+++|+|.+++.... ..+++..+..++.|++.|++||| .++|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence 99999999999997653 36899999999999999999999 8899999999999999999999
Q ss_pred EEEeecCccc
Q 046544 632 YLSDFGIAKL 641 (646)
Q Consensus 632 ki~DfGla~~ 641 (646)
||+|||+++.
T Consensus 182 kL~Dfg~~~~ 191 (327)
T 1fvr_A 182 KIADFGLSRG 191 (327)
T ss_dssp EECCTTCEES
T ss_pred EEcccCcCcc
Confidence 9999999874
No 275
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.90 E-value=8.3e-24 Score=222.76 Aligned_cols=146 Identities=23% Similarity=0.365 Sum_probs=129.9
Q ss_pred CCCCcceeecccccceEEEEEeCCCcEEEEEEEeccC--CchHHHHHHHHHHHHhCC--CCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIR--HRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--H~niv~~~~~~~~~~~~~lv~ 567 (646)
.+|+..+.||+|+||.||+|...+++.||||++.... ....+.+.+|+++++.++ ||||+++++++..++..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 3589999999999999999998889999999997653 234567899999999996 599999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
| +.+++|.+++.... .+++.++..++.||+.||+||| ..+|+||||||+||+++ ++.+||+|||+|+.+.
T Consensus 136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 9 56889999998765 6788899999999999999999 88999999999999996 5789999999998763
No 276
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.90 E-value=6.9e-24 Score=213.43 Aligned_cols=146 Identities=27% Similarity=0.471 Sum_probs=129.7
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEec----------
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN---------- 559 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~---------- 559 (646)
..+|+..+.||+|+||.||+|+.. +|+.||+|++.... +.+.+|+++++.++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 357889999999999999999976 79999999997553 345689999999999999999998854
Q ss_pred ------CCeeEEEEEecCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEE
Q 046544 560 ------EEFKALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAY 632 (646)
Q Consensus 560 ------~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~k 632 (646)
....++||||+++|+|.+++... ...+++..+..++.|++.|+.||| ..+|+||||||+||++++++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEE
Confidence 34579999999999999999754 246899999999999999999999 88999999999999999999999
Q ss_pred EEeecCccccc
Q 046544 633 LSDFGIAKLLI 643 (646)
Q Consensus 633 i~DfGla~~~~ 643 (646)
|+|||+++.+.
T Consensus 163 l~Dfg~~~~~~ 173 (284)
T 2a19_B 163 IGDFGLVTSLK 173 (284)
T ss_dssp ECCCTTCEESS
T ss_pred ECcchhheecc
Confidence 99999988764
No 277
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.90 E-value=1.2e-23 Score=221.29 Aligned_cols=147 Identities=27% Similarity=0.401 Sum_probs=124.0
Q ss_pred HHhCCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecC-------
Q 046544 489 RATNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNE------- 560 (646)
Q Consensus 489 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~------- 560 (646)
...++|+..+.||+|+||.||+|+. .+|+.||||++...... ..+|+++++.++||||+++++++...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 4567899999999999999999986 47999999998754322 23699999999999999999998443
Q ss_pred -------------------------------CeeEEEEEecCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHh
Q 046544 561 -------------------------------EFKALVLEYKPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLH 606 (646)
Q Consensus 561 -------------------------------~~~~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lH 606 (646)
...++||||+++ +|.+.+.. .+..+++..+..++.|++.||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 348899999974 87777653 3457899999999999999999999
Q ss_pred cCCCCCeEecCCCCCCEEEc-CCCcEEEEeecCccccc
Q 046544 607 FGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 607 ~~~~~~iiHrdlk~~Nil~~-~~~~~ki~DfGla~~~~ 643 (646)
+.+|+||||||+||+++ .++.+||+|||+|+.+.
T Consensus 159 ---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 193 (383)
T 3eb0_A 159 ---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLI 193 (383)
T ss_dssp ---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECC
T ss_pred ---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccC
Confidence 89999999999999998 68999999999998764
No 278
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.90 E-value=7e-24 Score=216.72 Aligned_cols=152 Identities=29% Similarity=0.509 Sum_probs=124.9
Q ss_pred HHhCCCCcceeecccccceEEEEEeC----CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCC-
Q 046544 489 RATNGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEE- 561 (646)
Q Consensus 489 ~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~- 561 (646)
...++|...+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+.++++++||||+++++++...+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34467888999999999999999753 35689999987553 334567899999999999999999999998764
Q ss_pred ----eeEEEEEecCCCCHHHHHhh-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEE
Q 046544 562 ----FKALVLEYKPHGSLEKYLYS-----SNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAY 632 (646)
Q Consensus 562 ----~~~lv~e~~~~g~L~~~l~~-----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~k 632 (646)
..++||||+++|+|.+++.. ....+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEE
Confidence 35999999999999999853 2346899999999999999999999 88999999999999999999999
Q ss_pred EEeecCccccc
Q 046544 633 LSDFGIAKLLI 643 (646)
Q Consensus 633 i~DfGla~~~~ 643 (646)
|+|||+|+.+.
T Consensus 188 l~Dfg~~~~~~ 198 (313)
T 3brb_A 188 VADFGLSKKIY 198 (313)
T ss_dssp ECSCSCC----
T ss_pred EeecCcceecc
Confidence 99999998653
No 279
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.90 E-value=5.5e-24 Score=228.96 Aligned_cols=146 Identities=25% Similarity=0.309 Sum_probs=125.0
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEecc--CCchHHHHHHHHHHHHhCCCCCceeEEEEEecC------C
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CGRAFKSFAVECEMMKSIRHRNLIKVISSCSNE------E 561 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~------~ 561 (646)
.++|+..+.||+|+||.||+|+.. +|+.||||++... .....+++.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 468999999999999999999865 6899999999754 233456788999999999999999999999655 3
Q ss_pred eeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccc
Q 046544 562 FKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641 (646)
Q Consensus 562 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~ 641 (646)
..|+||||+++ ++.+.+.. .+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+|+.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 57999999976 57766643 4789999999999999999999 88999999999999999999999999999986
Q ss_pred cc
Q 046544 642 LI 643 (646)
Q Consensus 642 ~~ 643 (646)
..
T Consensus 214 ~~ 215 (464)
T 3ttj_A 214 AG 215 (464)
T ss_dssp --
T ss_pred cC
Confidence 54
No 280
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.90 E-value=5e-24 Score=222.62 Aligned_cols=147 Identities=26% Similarity=0.371 Sum_probs=124.1
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCC------
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEE------ 561 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~------ 561 (646)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+++.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 367899999999999999999964 79999999986543 233567889999999999999999999997763
Q ss_pred eeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccc
Q 046544 562 FKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641 (646)
Q Consensus 562 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~ 641 (646)
..|+||||+ +++|.+++... .+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 459999999 88999999764 5889999999999999999999 88999999999999999999999999999987
Q ss_pred cc
Q 046544 642 LI 643 (646)
Q Consensus 642 ~~ 643 (646)
..
T Consensus 178 ~~ 179 (367)
T 1cm8_A 178 AD 179 (367)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 281
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.90 E-value=5.2e-24 Score=218.97 Aligned_cols=148 Identities=28% Similarity=0.444 Sum_probs=127.3
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcE----EEEEEEecc-CCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGME----VAVKVFNLQ-CGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKAL 565 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~l 565 (646)
++|+..+.||+|+||.||+|++. +++. ||+|.+... .....+.+.+|+.+++.++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 57899999999999999999864 4543 577766543 2345678899999999999999999999998765 789
Q ss_pred EEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 566 VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||||+++|+|.+++......+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 99999999999999887778999999999999999999999 8899999999999999999999999999998753
No 282
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.90 E-value=3.1e-24 Score=218.16 Aligned_cols=151 Identities=26% Similarity=0.365 Sum_probs=119.3
Q ss_pred HHhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEE
Q 046544 489 RATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALV 566 (646)
Q Consensus 489 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv 566 (646)
...++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++..++..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 34578999999999999999999854 68999999886543 33456788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhh-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCc
Q 046544 567 LEYKPHGSLEKYLYS-------SNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIA 639 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~-------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla 639 (646)
|||+++|+|.+++.. ....+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 999999999999874 2346899999999999999999999 889999999999999999999999999998
Q ss_pred ccc
Q 046544 640 KLL 642 (646)
Q Consensus 640 ~~~ 642 (646)
+.+
T Consensus 169 ~~~ 171 (303)
T 2vwi_A 169 AFL 171 (303)
T ss_dssp HHC
T ss_pred hee
Confidence 764
No 283
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.90 E-value=3.5e-24 Score=222.39 Aligned_cols=149 Identities=23% Similarity=0.384 Sum_probs=133.5
Q ss_pred hCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCc-----------------hHHHHHHHHHHHHhCCCCCceeE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-----------------AFKSFAVECEMMKSIRHRNLIKV 553 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~e~~~l~~l~H~niv~~ 553 (646)
.++|+..+.||+|+||.||+|+. +|+.||+|++...... ..+.+.+|+++++.++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36899999999999999999999 8999999998743211 11788999999999999999999
Q ss_pred EEEEecCCeeEEEEEecCCCCHHHH------HhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEecCCCCCCEEE
Q 046544 554 ISSCSNEEFKALVLEYKPHGSLEKY------LYSS-NCILDIFQRLNIMIDVASALEYLHFGCL-APVIHCDLKPDNVLL 625 (646)
Q Consensus 554 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~iiHrdlk~~Nil~ 625 (646)
++++...+..++||||+++|+|.++ +... ...+++..+..++.|++.|++||| . ++|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEE
Confidence 9999999999999999999999998 5542 457899999999999999999999 7 899999999999999
Q ss_pred cCCCcEEEEeecCccccc
Q 046544 626 DDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 626 ~~~~~~ki~DfGla~~~~ 643 (646)
+.++.+||+|||+++...
T Consensus 186 ~~~~~~kl~dfg~~~~~~ 203 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMV 203 (348)
T ss_dssp CTTSCEEECCCTTCEECB
T ss_pred cCCCcEEEeccccccccc
Confidence 999999999999998753
No 284
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.90 E-value=1.1e-23 Score=212.05 Aligned_cols=143 Identities=15% Similarity=0.044 Sum_probs=127.2
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC---chHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
++|+..+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|+.+++.++||||+++++++..++..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57999999999999999999975 589999999976532 23467899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~ 640 (646)
||++|++|.+++... ....++.+++.|++.||+||| ..+|+||||||+||+++.++.+||+++|...
T Consensus 111 e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~~~~ 177 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPATMP 177 (286)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCCCCT
T ss_pred EecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEeccccC
Confidence 999999999998543 355678899999999999999 8899999999999999999999999887543
No 285
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=2e-25 Score=235.33 Aligned_cols=238 Identities=17% Similarity=0.204 Sum_probs=165.6
Q ss_pred CCcccccCCCCCEEEccCCccccccC----ccccCCCCCCeEEeeccc---ccCcCchhh-------cCCCCCcEEEecC
Q 046544 178 IPEEITNLTNSITIDLGGNKLNGSIP----ITLSKLQKLQGLGLDDNK---LEGSIPDSI-------CRLTELYELELGG 243 (646)
Q Consensus 178 ~p~~~~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~---l~~~~~~~~-------~~l~~L~~L~L~~ 243 (646)
++..+..+++|++|+|++|.+....+ ..+..+++|++|+|++|. +.+.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 44555666666666666666665433 235566666777666643 333444443 5667777777777
Q ss_pred Ccccc----cCCccccCCCCCceeecCCCccccc-----ccccccc---------cccccccCCCCccc-CCCC---Ccc
Q 046544 244 NKLFG----SIPACFSNLASLRILSLSSNELTSI-----PLTFWNL---------KDILQLNFSSNFLT-GPLP---LEI 301 (646)
Q Consensus 244 N~i~~----~~~~~~~~l~~L~~L~L~~N~l~~l-----p~~~~~l---------~~L~~L~l~~N~l~-~~~~---~~~ 301 (646)
|++.+ .++..+..+++|++|+|++|.++.. +..+..+ ++|++|++++|.++ +..+ ..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 77765 3555666677777777777776532 2223333 67777777777775 2233 356
Q ss_pred CccccceEEEcccccccc-----cCccccCCCCCCCEEEccCccCC----CcccccccCCCCCCEEEccCCcCccc----
Q 046544 302 GNLKVLIGIDFSMNNFSS-----VIPTEIGGLKNLEYLFLGYNRLE----GSIPDSFGDLISLKFLNLSNNNLSGA---- 368 (646)
Q Consensus 302 ~~l~~L~~L~ls~N~l~~-----~~~~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~---- 368 (646)
..+++|+.|++++|.++. ..|..+..+++|+.|+|++|.++ ..+|..+..+++|+.|+|++|++++.
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 263 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 263 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHH
Confidence 677788888888888872 34457888999999999999995 56788899999999999999999865
Q ss_pred CCccccC--CCCCCceeCcCCccee----eccCC--CCCCCCccccccCCccccC
Q 046544 369 IPTSLEK--LSYLEDLNLSFNKLEG----EIPRG--GSFGNFAAESFEGNELLCG 415 (646)
Q Consensus 369 ~p~~~~~--l~~L~~L~L~~N~l~~----~~p~~--~~~~~~~~~~~~~N~~~c~ 415 (646)
+|..+.. +++|+.|+|++|++++ .+|.. ..+++++.+++++|++.+.
T Consensus 264 l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 264 VVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp HHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 5666644 8999999999999998 35554 2368899999999986643
No 286
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.90 E-value=1.4e-24 Score=227.89 Aligned_cols=148 Identities=18% Similarity=0.217 Sum_probs=122.8
Q ss_pred hCCCCcceeecccccceEEEEEe-CCCcEEEEEEEecc---CCchHHHHHHHH---HHHHhCCCCCceeEE-------EE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQ---CGRAFKSFAVEC---EMMKSIRHRNLIKVI-------SS 556 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~H~niv~~~-------~~ 556 (646)
.++|+..+.||+|+||+||+|+. .+|+.||||++... .....+.+.+|+ +.++.++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35688899999999999999996 46999999999743 334567888999 455566899999988 66
Q ss_pred EecCC-----------------eeEEEEEecCCCCHHHHHhhCCC------CCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 046544 557 CSNEE-----------------FKALVLEYKPHGSLEKYLYSSNC------ILDIFQRLNIMIDVASALEYLHFGCLAPV 613 (646)
Q Consensus 557 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~------~l~~~~~~~i~~~i~~~l~~lH~~~~~~i 613 (646)
+..++ ..|+||||+ +|+|.+++...+. .+++..+..++.|++.||+||| +.+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 65553 278999999 6799999976431 1224778889999999999999 8899
Q ss_pred EecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 614 IHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 614 iHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
+||||||+||+++.++.+||+|||+|+..
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~ 256 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRD 256 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEET
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheec
Confidence 99999999999999999999999999864
No 287
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=6.3e-25 Score=226.88 Aligned_cols=230 Identities=20% Similarity=0.213 Sum_probs=162.5
Q ss_pred ccCcEEEeecccccccCCcccccCCCCCEEEccCCccccc-cCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEE
Q 046544 162 HSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGS-IPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELE 240 (646)
Q Consensus 162 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 240 (646)
..++.|++++|.+.+..+. +..+++|++|++++|.+.+. .+..+..+++|++|++++|.+++..+..+..+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 3455566666666555444 44577777777777777655 666677777788888888877777777777778888888
Q ss_pred ecCC-ccccc-CCccccCCCCCceeecCCC-cccc--ccccccccc-ccccccCCCCc--cc-CCCCCccCccccceEEE
Q 046544 241 LGGN-KLFGS-IPACFSNLASLRILSLSSN-ELTS--IPLTFWNLK-DILQLNFSSNF--LT-GPLPLEIGNLKVLIGID 311 (646)
Q Consensus 241 L~~N-~i~~~-~~~~~~~l~~L~~L~L~~N-~l~~--lp~~~~~l~-~L~~L~l~~N~--l~-~~~~~~~~~l~~L~~L~ 311 (646)
+++| .+++. .+..+.++++|++|++++| .++. ++..+..++ +|++|++++|. ++ +.++..+..+++|+.|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 8887 56542 4556777778888888888 7774 566666777 78888888873 43 33455667788888888
Q ss_pred ccccc-ccccCccccCCCCCCCEEEccCcc-CCCcccccccCCCCCCEEEccCCcCcccCCccccCC-CCCCceeCcCCc
Q 046544 312 FSMNN-FSSVIPTEIGGLKNLEYLFLGYNR-LEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKL-SYLEDLNLSFNK 388 (646)
Q Consensus 312 ls~N~-l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~ 388 (646)
+++|. +++..+..+..+++|++|++++|. +.......++.+++|+.|++++| ++. ..+..+ ..++.|++++|+
T Consensus 229 l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~ 304 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSH 304 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCC
T ss_pred CCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEeccc
Confidence 88888 676777788888899999998885 33222236788889999999988 432 234444 347777889999
Q ss_pred ceeeccCC
Q 046544 389 LEGEIPRG 396 (646)
Q Consensus 389 l~~~~p~~ 396 (646)
+++..|..
T Consensus 305 l~~~~~~~ 312 (336)
T 2ast_B 305 FTTIARPT 312 (336)
T ss_dssp SCCTTCSS
T ss_pred CccccCCc
Confidence 98877655
No 288
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.90 E-value=1.3e-23 Score=212.45 Aligned_cols=147 Identities=27% Similarity=0.410 Sum_probs=128.3
Q ss_pred CCCCcce-eecccccceEEEEEe---CCCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEE
Q 046544 492 NGFSENN-LIGRGGFGSVYKARL---GDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKAL 565 (646)
Q Consensus 492 ~~~~~~~-~lg~G~~g~V~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~l 565 (646)
.+|...+ .||+|+||.||+|.+ .+++.||||++.... ....+.+.+|+++++.++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 5677777 999999999999964 247889999987543 23356789999999999999999999999 5567899
Q ss_pred EEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 566 VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||||+++++|.+++...+ .+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+++.+.
T Consensus 95 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 999999999999998754 6889999999999999999999 8899999999999999999999999999998764
No 289
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.90 E-value=1.2e-23 Score=215.98 Aligned_cols=148 Identities=27% Similarity=0.361 Sum_probs=126.5
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC--------CchHHHHHHHHHHHHhCCCCCceeEEEEEecCC
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--------GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEE 561 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~ 561 (646)
.++|...+.||+|+||.||+|+.. +++.||||++.... ......+.+|+++++.++||||+++++++..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 357899999999999999999865 68999999986432 112345788999999999999999999987665
Q ss_pred eeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCC---cEEEEeecC
Q 046544 562 FKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNL---VAYLSDFGI 638 (646)
Q Consensus 562 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~---~~ki~DfGl 638 (646)
.++||||+++|+|.+++.... .+++..+..++.|++.|++||| .++|+||||||+||+++.++ .+||+|||+
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred -eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 899999999999999987543 6899999999999999999999 88999999999999998655 499999999
Q ss_pred ccccc
Q 046544 639 AKLLI 643 (646)
Q Consensus 639 a~~~~ 643 (646)
++...
T Consensus 164 ~~~~~ 168 (322)
T 2ycf_A 164 SKILG 168 (322)
T ss_dssp CEECC
T ss_pred ceecc
Confidence 98754
No 290
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.90 E-value=1.7e-23 Score=216.04 Aligned_cols=144 Identities=35% Similarity=0.529 Sum_probs=121.8
Q ss_pred hCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHH--HHhCCCCCceeEEEEEec-----CCee
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEM--MKSIRHRNLIKVISSCSN-----EEFK 563 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~--l~~l~H~niv~~~~~~~~-----~~~~ 563 (646)
.++|+..+.||+|+||.||+|+. +++.||||++.... ...+..|.++ ++.++||||+++++.+.. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 36889999999999999999987 68999999997543 2334444444 456899999999975532 2357
Q ss_pred EEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC---------CeEecCCCCCCEEEcCCCcEEEE
Q 046544 564 ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA---------PVIHCDLKPDNVLLDDNLVAYLS 634 (646)
Q Consensus 564 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~---------~iiHrdlk~~Nil~~~~~~~ki~ 634 (646)
++||||+++|+|.+++.... .++..+..++.|++.||+||| .. +|+||||||+||+++.++.+||+
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 89999999999999997764 588889999999999999999 66 99999999999999999999999
Q ss_pred eecCccccc
Q 046544 635 DFGIAKLLI 643 (646)
Q Consensus 635 DfGla~~~~ 643 (646)
|||+|+.+.
T Consensus 163 DFG~a~~~~ 171 (336)
T 3g2f_A 163 DFGLSMRLT 171 (336)
T ss_dssp CCTTCEECS
T ss_pred eccceeecc
Confidence 999998754
No 291
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.90 E-value=1.2e-23 Score=214.31 Aligned_cols=146 Identities=30% Similarity=0.457 Sum_probs=124.0
Q ss_pred CCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEecC
Q 046544 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKP 571 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 571 (646)
++|+..+.||+|+||.||+|++. ++.||+|++... ...+.+.+|++++++++||||+++++++.. ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 56888999999999999999984 788999988643 345788999999999999999999998763 4799999999
Q ss_pred CCCHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCc-EEEEeecCcccc
Q 046544 572 HGSLEKYLYSSNC--ILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLV-AYLSDFGIAKLL 642 (646)
Q Consensus 572 ~g~L~~~l~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~-~ki~DfGla~~~ 642 (646)
+|+|.+++..... .+++..+..++.|+++|++|||+.+.++|+||||||+||+++.++. +||+|||+|+..
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~ 156 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI 156 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccc
Confidence 9999999976542 4678889999999999999999433389999999999999988776 799999998764
No 292
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.90 E-value=2.2e-23 Score=210.50 Aligned_cols=147 Identities=28% Similarity=0.384 Sum_probs=128.6
Q ss_pred CCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEec----CCeeEE
Q 046544 493 GFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSN----EEFKAL 565 (646)
Q Consensus 493 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~----~~~~~l 565 (646)
.|...+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+.+++.++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4677889999999999999864 68899999987543 3345678899999999999999999998865 356899
Q ss_pred EEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCEEEc-CCCcEEEEeecCcccc
Q 046544 566 VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAP--VIHCDLKPDNVLLD-DNLVAYLSDFGIAKLL 642 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--iiHrdlk~~Nil~~-~~~~~ki~DfGla~~~ 642 (646)
||||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+ |+||||||+||+++ .++.+||+|||+|+..
T Consensus 107 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 999999999999997653 5889999999999999999999 777 99999999999997 7899999999999754
Q ss_pred c
Q 046544 643 I 643 (646)
Q Consensus 643 ~ 643 (646)
.
T Consensus 183 ~ 183 (290)
T 1t4h_A 183 R 183 (290)
T ss_dssp C
T ss_pred c
Confidence 3
No 293
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.90 E-value=1.8e-24 Score=219.90 Aligned_cols=146 Identities=30% Similarity=0.485 Sum_probs=118.3
Q ss_pred CCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHh--CCCCCceeEEEEEecCC----eeEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKS--IRHRNLIKVISSCSNEE----FKAL 565 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~~~~~~~~~~----~~~l 565 (646)
++|+..+.||+|+||.||+|++. |+.||||++... ....+.+|.+++.. ++||||+++++++...+ ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 57899999999999999999874 889999998643 33567778888877 79999999999998776 7899
Q ss_pred EEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeEecCCCCCCEEEcCCCcEEEEeecCcc
Q 046544 566 VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG-----CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-----~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~ 640 (646)
||||+++|+|.+++... .+++..+..++.|++.|++|||.. +.++|+||||||+||+++.++.+||+|||+|+
T Consensus 79 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~ 156 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred EEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcce
Confidence 99999999999999765 467778899999999999999932 25789999999999999999999999999997
Q ss_pred ccc
Q 046544 641 LLI 643 (646)
Q Consensus 641 ~~~ 643 (646)
...
T Consensus 157 ~~~ 159 (303)
T 3gxj_A 157 RHD 159 (303)
T ss_dssp CEE
T ss_pred ecc
Confidence 653
No 294
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.90 E-value=1e-23 Score=235.18 Aligned_cols=141 Identities=28% Similarity=0.427 Sum_probs=125.4
Q ss_pred eeecccccceEEEEEeC---CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEEecCC
Q 046544 498 NLIGRGGFGSVYKARLG---DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYKPH 572 (646)
Q Consensus 498 ~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 572 (646)
+.||+|+||.||+|.+. +++.||||+++... ....+++.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 57999999999999643 46889999997543 2345789999999999999999999999975 458899999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 573 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 573 g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|+|.+++.... .+++..+..++.||+.||+||| .++|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 454 g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~ 520 (635)
T 4fl3_A 454 GPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 520 (635)
T ss_dssp EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTT
T ss_pred CCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccc
Confidence 99999997654 6899999999999999999999 8899999999999999999999999999998764
No 295
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.90 E-value=2.5e-23 Score=214.26 Aligned_cols=142 Identities=24% Similarity=0.405 Sum_probs=127.3
Q ss_pred CCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccCCchHHHHHHHHHHHHhCC-CCCceeEEEEEec--CCeeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR-HRNLIKVISSCSN--EEFKALVL 567 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~~~~~~~~--~~~~~lv~ 567 (646)
++|+..+.||+|+||.||+|+. .+++.||+|++... ..+.+.+|+++++.++ ||||+++++++.. ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 5788999999999999999986 47899999998743 3467889999999997 9999999999987 56789999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCC-cEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNL-VAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~-~~ki~DfGla~~~~ 643 (646)
||+++++|.+++.. +++..+..++.|++.|++||| ..+|+||||||+||+++.++ .+||+|||+|+.+.
T Consensus 113 e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp ECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 99999999998853 788899999999999999999 88999999999999999766 89999999998654
No 296
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.90 E-value=1.7e-23 Score=214.34 Aligned_cols=145 Identities=28% Similarity=0.411 Sum_probs=124.5
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEe------------
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCS------------ 558 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~------------ 558 (646)
++|+..+.||+|+||.||+|+.. +|+.||+|++........+.+.+|+++++.++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 67899999999999999999976 58999999998766666778899999999999999999999874
Q ss_pred --cCCeeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEc-CCCcEEEEe
Q 046544 559 --NEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLD-DNLVAYLSD 635 (646)
Q Consensus 559 --~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~-~~~~~ki~D 635 (646)
..+..++||||++ |+|.+++... .+++..+..++.|++.|++||| ..+|+||||||+||+++ +++.+||+|
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEECC
T ss_pred ccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEcc
Confidence 3467899999997 5999998653 5889999999999999999999 88999999999999997 577999999
Q ss_pred ecCcccc
Q 046544 636 FGIAKLL 642 (646)
Q Consensus 636 fGla~~~ 642 (646)
||+|+..
T Consensus 165 fg~~~~~ 171 (320)
T 2i6l_A 165 FGLARIM 171 (320)
T ss_dssp CTTCBCC
T ss_pred Ccccccc
Confidence 9999865
No 297
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.90 E-value=2.5e-23 Score=211.10 Aligned_cols=145 Identities=23% Similarity=0.353 Sum_probs=126.9
Q ss_pred CCCCcc-eeecccccceEEEEEe-CCCcEEEEEEEeccCCchHHHHHHHHHHH-HhCCCCCceeEEEEEec----CCeeE
Q 046544 492 NGFSEN-NLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAVECEMM-KSIRHRNLIKVISSCSN----EEFKA 564 (646)
Q Consensus 492 ~~~~~~-~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~H~niv~~~~~~~~----~~~~~ 564 (646)
++|... +.||+|+||.||+|+. .+++.||+|++... ..+.+|++++ +..+||||+++++++.. +...+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456665 7899999999999986 47899999998632 4567788887 66699999999999876 67789
Q ss_pred EEEEecCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcC---CCcEEEEeecCcc
Q 046544 565 LVLEYKPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAK 640 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~---~~~~ki~DfGla~ 640 (646)
+||||+++|+|.+++.... ..+++..+..++.|++.|++||| ..+|+||||||+||+++. ++.+||+|||+|+
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 9999999999999998764 36899999999999999999999 889999999999999987 7899999999998
Q ss_pred cccC
Q 046544 641 LLIG 644 (646)
Q Consensus 641 ~~~~ 644 (646)
...+
T Consensus 169 ~~~~ 172 (299)
T 3m2w_A 169 ETTG 172 (299)
T ss_dssp ECTT
T ss_pred cccc
Confidence 7653
No 298
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.90 E-value=7.5e-24 Score=212.66 Aligned_cols=150 Identities=27% Similarity=0.410 Sum_probs=130.5
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEec--CCeeEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSN--EEFKAL 565 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~--~~~~~l 565 (646)
.++|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.. .+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467889999999999999999875 68999999998653 2345678899999999999999999998753 568999
Q ss_pred EEEecCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-----eEecCCCCCCEEEcCCCcEEEEeec
Q 046544 566 VLEYKPHGSLEKYLYSS---NCILDIFQRLNIMIDVASALEYLHFGCLAP-----VIHCDLKPDNVLLDDNLVAYLSDFG 637 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~-----iiHrdlk~~Nil~~~~~~~ki~DfG 637 (646)
||||+++|+|.+++... ...+++..+..++.|++.|++||| ..+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999998753 235899999999999999999999 666 9999999999999999999999999
Q ss_pred Cccccc
Q 046544 638 IAKLLI 643 (646)
Q Consensus 638 la~~~~ 643 (646)
+++...
T Consensus 162 ~~~~~~ 167 (279)
T 2w5a_A 162 LARILN 167 (279)
T ss_dssp HHHHC-
T ss_pred hheeec
Confidence 987653
No 299
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.90 E-value=7.4e-24 Score=217.87 Aligned_cols=152 Identities=30% Similarity=0.405 Sum_probs=133.2
Q ss_pred HHHHhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhC-CCCCceeEEEEEec-----
Q 046544 487 LCRATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSI-RHRNLIKVISSCSN----- 559 (646)
Q Consensus 487 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~----- 559 (646)
+....++|+..+.||+|+||.||+|+.. +|+.||+|++..... ..+.+.+|+.+++++ +||||+++++++..
T Consensus 19 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred ccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 3345578999999999999999999974 789999999975533 346788999999998 89999999999976
Q ss_pred -CCeeEEEEEecCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeec
Q 046544 560 -EEFKALVLEYKPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637 (646)
Q Consensus 560 -~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfG 637 (646)
.+..++||||+++|+|.+++.... ..+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg 174 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFG 174 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCT
T ss_pred ccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCc
Confidence 467899999999999999998653 46889999999999999999999 8899999999999999999999999999
Q ss_pred Ccccc
Q 046544 638 IAKLL 642 (646)
Q Consensus 638 la~~~ 642 (646)
+++.+
T Consensus 175 ~~~~~ 179 (326)
T 2x7f_A 175 VSAQL 179 (326)
T ss_dssp TTC--
T ss_pred Cceec
Confidence 98765
No 300
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.90 E-value=1.9e-23 Score=216.09 Aligned_cols=148 Identities=26% Similarity=0.339 Sum_probs=128.6
Q ss_pred hCCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccC-CchHHHHHHHHHH-HHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC-GRAFKSFAVECEM-MKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... .....++..|..+ ++.++||||+++++++..++..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 36788899999999999999996 479999999997653 2334456666665 77789999999999999999999999
Q ss_pred EecCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 568 EYKPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLHFGCLA-PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 568 e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
||+++ +|.+++.. ....+++..+..++.|++.||+||| .. +|+||||||+||+++.++.+||+|||+|+.+
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 99975 99888764 4557899999999999999999999 65 9999999999999999999999999998765
No 301
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.90 E-value=9.4e-24 Score=213.29 Aligned_cols=148 Identities=28% Similarity=0.392 Sum_probs=124.1
Q ss_pred CCCCcceeecccccceEEEEEeC--CCc--EEEEEEEecc---CCchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG--DGM--EVAVKVFNLQ---CGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKA 564 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~ 564 (646)
++|+..+.||+|+||.||+|++. +++ .||+|+++.. .....+.+.+|+++++.++||||+++++++..+. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 57889999999999999999853 333 6899988754 2344578899999999999999999999998765 88
Q ss_pred EEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 565 LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
+||||+++|+|.+++......+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++.+.
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 999999999999999876567899999999999999999999 8899999999999999999999999999998764
No 302
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.90 E-value=7.8e-24 Score=232.65 Aligned_cols=138 Identities=22% Similarity=0.156 Sum_probs=111.3
Q ss_pred ecccccceEEEEE-eCCCcEEEEEEEeccC----------CchHHHHHHHHHHHHhC-CCCCceeEEEEEecCCeeEEEE
Q 046544 500 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC----------GRAFKSFAVECEMMKSI-RHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 500 lg~G~~g~V~~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ 567 (646)
.+.|+.|.+..++ .-.|+.||+|++.... +...++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4566666666554 3358889999997542 12345789999999999 7999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccccC
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~~ 644 (646)
||++||+|.+++...+ .+++. +|+.||+.||+|+| ++|||||||||+|||++++|.+||+|||+|+.+.+
T Consensus 322 Eyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp ECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred ecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 9999999999998764 55543 58999999999999 89999999999999999999999999999997643
No 303
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.90 E-value=1.1e-23 Score=216.78 Aligned_cols=148 Identities=26% Similarity=0.457 Sum_probs=127.9
Q ss_pred CCCCcceeecccccceEEEEEe------CCCcEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeE
Q 046544 492 NGFSENNLIGRGGFGSVYKARL------GDGMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKA 564 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~ 564 (646)
++|+..+.||+|+||.||+|++ .+++.||||++.... .....++.+|+.++++++||||+++++++...+..+
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 109 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcE
Confidence 6799999999999999999983 257789999987543 334567889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcC---CCcEEEEe
Q 046544 565 LVLEYKPHGSLEKYLYSSN------CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD---NLVAYLSD 635 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~~~~------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~---~~~~ki~D 635 (646)
+||||+++|+|.+++.... ..+++..+..++.|++.|+.||| ..+|+||||||+||+++. +..+||+|
T Consensus 110 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~D 186 (327)
T 2yfx_A 110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGD 186 (327)
T ss_dssp EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEECc
Confidence 9999999999999998754 34888999999999999999999 889999999999999984 45699999
Q ss_pred ecCcccc
Q 046544 636 FGIAKLL 642 (646)
Q Consensus 636 fGla~~~ 642 (646)
||+++..
T Consensus 187 fg~~~~~ 193 (327)
T 2yfx_A 187 FGMARDI 193 (327)
T ss_dssp CHHHHHH
T ss_pred ccccccc
Confidence 9998754
No 304
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.89 E-value=2.2e-23 Score=215.19 Aligned_cols=148 Identities=28% Similarity=0.353 Sum_probs=130.2
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCC-CCCceeEEEEEe--------cCC
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR-HRNLIKVISSCS--------NEE 561 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~~~~~~~--------~~~ 561 (646)
.+|+..+.||+|+||.||+|++. +|+.||+|++........+.+.+|+.+++++. ||||+++++++. ...
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 47889999999999999999964 78999999987666556678899999999996 999999999984 334
Q ss_pred eeEEEEEecCCCCHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCEEEcCCCcEEEEeec
Q 046544 562 FKALVLEYKPHGSLEKYLYS--SNCILDIFQRLNIMIDVASALEYLHFGCLAP--VIHCDLKPDNVLLDDNLVAYLSDFG 637 (646)
Q Consensus 562 ~~~lv~e~~~~g~L~~~l~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--iiHrdlk~~Nil~~~~~~~ki~DfG 637 (646)
..++||||+. |+|.+++.. ....+++..+..++.|++.|++||| ..+ |+||||||+||+++.++.+||+|||
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecCc
Confidence 5799999995 699998865 3456899999999999999999999 777 9999999999999999999999999
Q ss_pred Cccccc
Q 046544 638 IAKLLI 643 (646)
Q Consensus 638 la~~~~ 643 (646)
+++.+.
T Consensus 184 ~~~~~~ 189 (337)
T 3ll6_A 184 SATTIS 189 (337)
T ss_dssp TCBCCS
T ss_pred cceecc
Confidence 998754
No 305
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.89 E-value=2e-23 Score=211.88 Aligned_cols=147 Identities=29% Similarity=0.455 Sum_probs=129.1
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 568 (646)
++|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57889999999999999999975 68999999986543 2234678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 569 YKPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
|++ |+|.+++.... ..+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 153 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF 153 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHH
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhc
Confidence 997 59999987653 46889999999999999999999 889999999999999999999999999998764
No 306
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.89 E-value=7.8e-23 Score=211.65 Aligned_cols=150 Identities=29% Similarity=0.468 Sum_probs=131.4
Q ss_pred HHHhCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHh--CCCCCceeEEEEEecCC----
Q 046544 488 CRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKS--IRHRNLIKVISSCSNEE---- 561 (646)
Q Consensus 488 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~~~~~~~~~~---- 561 (646)
....++|+..+.||+|+||.||+|+. +|+.||||++... ..+.+.+|+++++. ++||||+++++++...+
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 44457899999999999999999998 5899999998643 34567789998887 79999999999998876
Q ss_pred eeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeEecCCCCCCEEEcCCCcEEEEee
Q 046544 562 FKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG-----CLAPVIHCDLKPDNVLLDDNLVAYLSDF 636 (646)
Q Consensus 562 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-----~~~~iiHrdlk~~Nil~~~~~~~ki~Df 636 (646)
..++||||+++|+|.+++... .+++..+..++.|++.|++|||.. +..+|+||||||+||+++.++.+||+||
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 191 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 191 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCC
T ss_pred eeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEEC
Confidence 789999999999999999765 488999999999999999999932 1468999999999999999999999999
Q ss_pred cCccccc
Q 046544 637 GIAKLLI 643 (646)
Q Consensus 637 Gla~~~~ 643 (646)
|+|+...
T Consensus 192 g~~~~~~ 198 (342)
T 1b6c_B 192 GLAVRHD 198 (342)
T ss_dssp TTCEEEE
T ss_pred CCceecc
Confidence 9997653
No 307
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.89 E-value=1.8e-23 Score=211.07 Aligned_cols=149 Identities=25% Similarity=0.287 Sum_probs=120.2
Q ss_pred hCCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccCCc-h-HHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGR-A-FKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~-~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
.++|+..+.||+|+||.||+|+. .+|+.||+|++...... . .+.+.++...++.++||||+++++++..++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 36788999999999999999996 47999999998755322 2 223444555578889999999999999999999999
Q ss_pred EecCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLHFGCLA-PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||+++ ++.+++.. .+..+++..+..++.|++.|++||| .. +|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99975 88777654 4457899999999999999999999 76 99999999999999999999999999998653
No 308
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.89 E-value=2e-23 Score=214.62 Aligned_cols=156 Identities=21% Similarity=0.284 Sum_probs=134.5
Q ss_pred HHHHHHhCCCCcc-eeecccccceEEEEEeC-CCcEEEEEEEeccC--CchHHHHHHHHHHHHhC-CCCCceeEEEEEec
Q 046544 485 LELCRATNGFSEN-NLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSI-RHRNLIKVISSCSN 559 (646)
Q Consensus 485 ~~~~~~~~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~ 559 (646)
.......++|... +.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+.+++.+ +||||+++++++..
T Consensus 21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~ 100 (327)
T 3lm5_A 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN 100 (327)
T ss_dssp BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred HHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe
Confidence 3344555667776 89999999999999865 69999999987543 23356788999999999 56999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcC---CCcEEEEe
Q 046544 560 EEFKALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD---NLVAYLSD 635 (646)
Q Consensus 560 ~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~---~~~~ki~D 635 (646)
.+..++||||+++|+|.+++... ...+++..+..++.|++.||+||| ..+|+||||||+||+++. ++.+||+|
T Consensus 101 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~D 177 (327)
T 3lm5_A 101 TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVD 177 (327)
T ss_dssp SSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred CCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEee
Confidence 99999999999999999998653 356899999999999999999999 889999999999999987 78999999
Q ss_pred ecCccccc
Q 046544 636 FGIAKLLI 643 (646)
Q Consensus 636 fGla~~~~ 643 (646)
||+|+.+.
T Consensus 178 fg~a~~~~ 185 (327)
T 3lm5_A 178 FGMSRKIG 185 (327)
T ss_dssp GGGCEEC-
T ss_pred CccccccC
Confidence 99998753
No 309
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.89 E-value=8.7e-24 Score=212.15 Aligned_cols=146 Identities=34% Similarity=0.476 Sum_probs=125.2
Q ss_pred hCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecC-CeeEEEEEe
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNE-EFKALVLEY 569 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~-~~~~lv~e~ 569 (646)
.++|+..+.||+|+||.||+|+. +|+.||+|++.... ..+.+.+|+++++.++||||+++++++... +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 36788999999999999999987 48899999986543 456789999999999999999999987655 478999999
Q ss_pred cCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 570 KPHGSLEKYLYSSNC-ILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 570 ~~~g~L~~~l~~~~~-~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
+++|+|.+++..... .+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~ 167 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 167 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC----
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeeccccccc
Confidence 999999999976432 3788889999999999999999 889999999999999999999999999998764
No 310
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.89 E-value=9.6e-24 Score=218.81 Aligned_cols=146 Identities=25% Similarity=0.299 Sum_probs=122.1
Q ss_pred CCCCcceeecccccceEEEEEeC----CCcEEEEEEEeccCCc-----------hHHHHHHHHHHHHhCCCCCceeEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQCGR-----------AFKSFAVECEMMKSIRHRNLIKVISS 556 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~H~niv~~~~~ 556 (646)
++|+..+.||+|+||.||+|+.. ++..||+|++...... ..+.+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57899999999999999999975 5778999998765421 11346678889999999999999999
Q ss_pred Eec----CCeeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCC--c
Q 046544 557 CSN----EEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNL--V 630 (646)
Q Consensus 557 ~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~--~ 630 (646)
+.. ....|+||||+ +++|.+++...+ .+++.++..++.|++.||+||| ..+|+||||||+||+++.++ .
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTTS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCCc
Confidence 987 67899999999 999999997655 7899999999999999999999 88999999999999998777 9
Q ss_pred EEEEeecCcccc
Q 046544 631 AYLSDFGIAKLL 642 (646)
Q Consensus 631 ~ki~DfGla~~~ 642 (646)
+||+|||+|+.+
T Consensus 192 ~kL~Dfg~a~~~ 203 (345)
T 2v62_A 192 VYLADYGLSYRY 203 (345)
T ss_dssp EEECCCTTCEES
T ss_pred EEEEeCCCceec
Confidence 999999999765
No 311
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.89 E-value=4.4e-23 Score=209.87 Aligned_cols=149 Identities=24% Similarity=0.394 Sum_probs=128.0
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC----CchHHHHHHHHHHHHhCCCCCceeEEEEEe--cCCee
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC----GRAFKSFAVECEMMKSIRHRNLIKVISSCS--NEEFK 563 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~H~niv~~~~~~~--~~~~~ 563 (646)
.++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++. ..+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999964 68999999997542 234567899999999999999999999984 44578
Q ss_pred EEEEEecCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 564 ALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 564 ~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
++||||++++ +.+++... ...+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999876 77776653 346899999999999999999999 889999999999999999999999999999865
Q ss_pred c
Q 046544 643 I 643 (646)
Q Consensus 643 ~ 643 (646)
.
T Consensus 160 ~ 160 (305)
T 2wtk_C 160 H 160 (305)
T ss_dssp C
T ss_pred C
Confidence 3
No 312
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.89 E-value=4.5e-23 Score=215.93 Aligned_cols=146 Identities=24% Similarity=0.303 Sum_probs=125.2
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCC------
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEE------ 561 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~------ 561 (646)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 368999999999999999999865 68999999997543 234467889999999999999999999997664
Q ss_pred eeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccc
Q 046544 562 FKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641 (646)
Q Consensus 562 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~ 641 (646)
..|+||||+++ ++.+++.. .+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 78999999975 78888753 4789999999999999999999 88999999999999999999999999999986
Q ss_pred cc
Q 046544 642 LI 643 (646)
Q Consensus 642 ~~ 643 (646)
..
T Consensus 177 ~~ 178 (371)
T 2xrw_A 177 AG 178 (371)
T ss_dssp --
T ss_pred cc
Confidence 53
No 313
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.89 E-value=3.9e-23 Score=215.88 Aligned_cols=147 Identities=24% Similarity=0.326 Sum_probs=129.9
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC-chHHHHHHHHHHHHhCCCCCceeEEEEEecC-----Cee
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKVISSCSNE-----EFK 563 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~-----~~~ 563 (646)
..+|+..+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 367999999999999999999865 688999999975432 3346788999999999999999999998765 368
Q ss_pred EEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 564 ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 564 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
++||||++ |+|.+++... .+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+...
T Consensus 106 ~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 99999997 5999998765 4899999999999999999999 8899999999999999999999999999998653
No 314
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.89 E-value=5.6e-23 Score=207.25 Aligned_cols=151 Identities=25% Similarity=0.402 Sum_probs=133.9
Q ss_pred HHhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEE
Q 046544 489 RATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKAL 565 (646)
Q Consensus 489 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~l 565 (646)
...++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 33468999999999999999999975 68999999987543 3445788999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcC---CCcEEEEeecCcccc
Q 046544 566 VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAKLL 642 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~---~~~~ki~DfGla~~~ 642 (646)
||||+++++|.+++.... .+++..+..++.|++.|++||| ..+|+||||||+||+++. ++.+||+|||+++..
T Consensus 99 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 99 VGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp EECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 999999999999886654 5889999999999999999999 889999999999999975 347999999999865
Q ss_pred c
Q 046544 643 I 643 (646)
Q Consensus 643 ~ 643 (646)
.
T Consensus 175 ~ 175 (287)
T 2wei_A 175 Q 175 (287)
T ss_dssp C
T ss_pred c
Confidence 4
No 315
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.89 E-value=3.4e-23 Score=231.77 Aligned_cols=149 Identities=25% Similarity=0.376 Sum_probs=131.7
Q ss_pred hCCCCcceeecccccceEEEEEeC----CCcEEEEEEEeccCC-chHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKAL 565 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~l 565 (646)
.++|+..+.||+|+||.||+|++. .+..||+|.+..... ...+.+.+|+.+++.++||||+++++++. ++..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 456888899999999999999864 256799998875433 33467899999999999999999999984 566899
Q ss_pred EEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 566 VLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 566 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||||+++|+|.+++...+..+++..+..++.|++.|++||| .++|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 468 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 99999999999999877667899999999999999999999 8899999999999999999999999999998764
No 316
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.89 E-value=5.2e-23 Score=208.34 Aligned_cols=148 Identities=28% Similarity=0.444 Sum_probs=125.2
Q ss_pred HhCCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEE-ecCCeeEEEE
Q 046544 490 ATNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSC-SNEEFKALVL 567 (646)
Q Consensus 490 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~-~~~~~~~lv~ 567 (646)
..++|+..+.||+|+||.||+|+. .+++.||+|++..... .+.+.+|+++++.++|++++..+..+ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 447899999999999999999996 5789999998765432 24577899999999888777666555 5667889999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEE---cCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~---~~~~~~ki~DfGla~~~~ 643 (646)
||+ +++|.+++......+++..+..++.|++.|++||| +.+|+||||||+||++ ++++.+||+|||+|+.+.
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 999 99999999876667999999999999999999999 8899999999999999 788999999999998754
No 317
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.89 E-value=1.4e-23 Score=219.14 Aligned_cols=147 Identities=24% Similarity=0.337 Sum_probs=115.4
Q ss_pred hCCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecC------C
Q 046544 491 TNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNE------E 561 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~------~ 561 (646)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36899999999999999999985 468999999986543 23456788999999999999999999998754 5
Q ss_pred eeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccc
Q 046544 562 FKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641 (646)
Q Consensus 562 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~ 641 (646)
..|+||||+ +++|.+++.. ..+++..+..++.|+++|++||| ..+|+||||||+||+++.++.+||+|||+|+.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 679999999 7899998865 35899999999999999999999 88999999999999999999999999999986
Q ss_pred cc
Q 046544 642 LI 643 (646)
Q Consensus 642 ~~ 643 (646)
..
T Consensus 182 ~~ 183 (367)
T 2fst_X 182 TA 183 (367)
T ss_dssp --
T ss_pred cc
Confidence 53
No 318
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.89 E-value=5.6e-23 Score=213.75 Aligned_cols=147 Identities=24% Similarity=0.352 Sum_probs=130.0
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC-chHHHHHHHHHHHHhCCCCCceeEEEEEecC-----Cee
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKVISSCSNE-----EFK 563 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~-----~~~ 563 (646)
.++|+..+.||+|+||.||+|+.. +|+.||||++..... .....+.+|+++++.++||||+++++++..+ ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 367899999999999999999975 689999999975432 3345788999999999999999999987754 678
Q ss_pred EEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 564 ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 564 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
++||||++ |+|.+++... .+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+|+.+.
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999997 5999998764 5899999999999999999999 8899999999999999999999999999998653
No 319
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.89 E-value=1.8e-23 Score=218.94 Aligned_cols=148 Identities=11% Similarity=0.074 Sum_probs=111.5
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC---chHHHHHHHHHHHHhC--CCCCceeEE-------EEEe
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG---RAFKSFAVECEMMKSI--RHRNLIKVI-------SSCS 558 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l--~H~niv~~~-------~~~~ 558 (646)
..|+..+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45888999999999999999965 789999999987543 2345667775444444 699988855 3443
Q ss_pred cC-----------------CeeEEEEEecCCCCHHHHHhhCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCCCeEe
Q 046544 559 NE-----------------EFKALVLEYKPHGSLEKYLYSSNCILDIFQR------LNIMIDVASALEYLHFGCLAPVIH 615 (646)
Q Consensus 559 ~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~------~~i~~~i~~~l~~lH~~~~~~iiH 615 (646)
.+ ...|+||||++ |+|.+++...+..+++..+ ..++.|++.||+||| +++|+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ivH 217 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVH 217 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCcc
Confidence 32 33799999998 8999999865434455555 678899999999999 889999
Q ss_pred cCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 616 CDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 616 rdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|||||+|||++.++.+||+|||+|+...
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~ 245 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVG 245 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETT
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecC
Confidence 9999999999999999999999998653
No 320
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.89 E-value=8.9e-23 Score=206.66 Aligned_cols=147 Identities=28% Similarity=0.447 Sum_probs=128.3
Q ss_pred hCCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEE-ecCCeeEEEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSC-SNEEFKALVLE 568 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~-~~~~~~~lv~e 568 (646)
.++|+..+.||+|+||.||+|+. .+|+.||+|++..... .+.+.+|+.+++.++|++++..+.++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46899999999999999999996 5799999999875543 24688999999999988766555554 56678899999
Q ss_pred ecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEE---cCCCcEEEEeecCccccc
Q 046544 569 YKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~---~~~~~~ki~DfGla~~~~ 643 (646)
|+ +++|.+++......+++..+..++.|++.|++||| .++|+||||||+||++ ++++.+||+|||+|+...
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 99 89999999876667999999999999999999999 8899999999999999 478899999999998754
No 321
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.89 E-value=1.1e-23 Score=219.13 Aligned_cols=143 Identities=18% Similarity=0.241 Sum_probs=125.2
Q ss_pred CCCCcceeecccccceEEEEEeCC---------CcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCcee----------
Q 046544 492 NGFSENNLIGRGGFGSVYKARLGD---------GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIK---------- 552 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~---------- 552 (646)
++|+..+.||+|+||.||+|+... ++.||+|++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 578999999999999999998653 788999998744 45778999999999999987
Q ss_pred -----EEEEEec-CCeeEEEEEecCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEE
Q 046544 553 -----VISSCSN-EEFKALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL 625 (646)
Q Consensus 553 -----~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~ 625 (646)
+++++.. ++..++||||+ +++|.+++... ...+++..+..++.|++.||+||| ..+|+||||||+||++
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFV 192 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEE
Confidence 5667765 67899999999 99999999875 347899999999999999999999 8899999999999999
Q ss_pred cCCC--cEEEEeecCccccc
Q 046544 626 DDNL--VAYLSDFGIAKLLI 643 (646)
Q Consensus 626 ~~~~--~~ki~DfGla~~~~ 643 (646)
+.++ .+||+|||+|+.+.
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~ 212 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYC 212 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSS
T ss_pred cCCCCceEEEecCcceeecc
Confidence 9988 99999999997653
No 322
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.89 E-value=9.5e-23 Score=219.47 Aligned_cols=148 Identities=25% Similarity=0.382 Sum_probs=129.7
Q ss_pred hCCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCC-CCceeEEEEEecCCeeEEEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRH-RNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~~~~~~~~~~~~~lv~e 568 (646)
.++|+..+.||+|+||.||+|+. .+++.||||++..... .+++.+|+++++.++| ++|+.+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 36799999999999999999996 4799999998875543 2457889999999976 566677777778888999999
Q ss_pred ecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEE---cCCCcEEEEeecCcccccC
Q 046544 569 YKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLLIG 644 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~---~~~~~~ki~DfGla~~~~~ 644 (646)
|+ +++|.+++......+++..+..|+.||+.||+||| .++|+||||||+|||+ +.++.+||+|||+|+.+..
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 99 89999999876678999999999999999999999 8899999999999999 5889999999999987643
No 323
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.89 E-value=5.5e-23 Score=216.87 Aligned_cols=144 Identities=31% Similarity=0.453 Sum_probs=120.9
Q ss_pred CCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCC------eeEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEE------FKAL 565 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~------~~~l 565 (646)
.+|+..+.||+|+||.||+|+...+..||+|.+...... ..+|+++++.++||||+++++++...+ ..++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 468899999999999999999877777999988644322 236999999999999999999986543 3789
Q ss_pred EEEecCCCCHHHHHh---hCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEc-CCCcEEEEeecCccc
Q 046544 566 VLEYKPHGSLEKYLY---SSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKL 641 (646)
Q Consensus 566 v~e~~~~g~L~~~l~---~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~-~~~~~ki~DfGla~~ 641 (646)
||||++++ +.+.+. .....+++..+..++.|++.||+||| ..+|+||||||+||+++ .++.+||+|||+|+.
T Consensus 116 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 116 VLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 99999875 443332 23457899999999999999999999 88999999999999999 799999999999987
Q ss_pred cc
Q 046544 642 LI 643 (646)
Q Consensus 642 ~~ 643 (646)
+.
T Consensus 192 ~~ 193 (394)
T 4e7w_A 192 LI 193 (394)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 324
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.89 E-value=6.2e-23 Score=218.30 Aligned_cols=144 Identities=30% Similarity=0.470 Sum_probs=121.0
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecC------CeeE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNE------EFKA 564 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~------~~~~ 564 (646)
.+|+..+.||+|+||.||+|++. +|+.||||++..... ...+|+++++.++||||+++++++... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46888999999999999999975 699999999875432 234699999999999999999988542 2467
Q ss_pred EEEEecCCCCHHHHHh---hCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCC-CcEEEEeecCcc
Q 046544 565 LVLEYKPHGSLEKYLY---SSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDN-LVAYLSDFGIAK 640 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~---~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~-~~~ki~DfGla~ 640 (646)
+||||+++ ++.+.+. .....+++..+..++.|+++||+||| ..+|+||||||+|||++.+ +.+||+|||+|+
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999976 6666554 33457899999999999999999999 8999999999999999954 678999999998
Q ss_pred ccc
Q 046544 641 LLI 643 (646)
Q Consensus 641 ~~~ 643 (646)
.+.
T Consensus 206 ~~~ 208 (420)
T 1j1b_A 206 QLV 208 (420)
T ss_dssp ECC
T ss_pred hcc
Confidence 754
No 325
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.88 E-value=2e-23 Score=213.30 Aligned_cols=154 Identities=27% Similarity=0.358 Sum_probs=124.1
Q ss_pred HHHHHhCCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccCCc------hHHHHHHHHHHHHhC----CCCCceeEE
Q 046544 486 ELCRATNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGR------AFKSFAVECEMMKSI----RHRNLIKVI 554 (646)
Q Consensus 486 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l----~H~niv~~~ 554 (646)
+.....++|+..+.||+|+||.||+|+. .+++.||+|++...... ....+.+|+.+++++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 3445567899999999999999999986 46899999998754321 223456789999888 899999999
Q ss_pred EEEecCCeeEEEEEe-cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEc-CCCcEE
Q 046544 555 SSCSNEEFKALVLEY-KPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLD-DNLVAY 632 (646)
Q Consensus 555 ~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~-~~~~~k 632 (646)
+++...+..++|||| +.+++|.+++...+ .+++..+..++.|++.|++||| ..+|+||||||+||+++ .++.+|
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEE
Confidence 999999999999999 78999999997654 6899999999999999999999 88999999999999999 889999
Q ss_pred EEeecCccccc
Q 046544 633 LSDFGIAKLLI 643 (646)
Q Consensus 633 i~DfGla~~~~ 643 (646)
|+|||+++.+.
T Consensus 181 l~dfg~~~~~~ 191 (312)
T 2iwi_A 181 LIDFGSGALLH 191 (312)
T ss_dssp ECCCSSCEECC
T ss_pred EEEcchhhhcc
Confidence 99999998764
No 326
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.88 E-value=8.1e-23 Score=210.05 Aligned_cols=151 Identities=30% Similarity=0.455 Sum_probs=128.2
Q ss_pred HHhCCCCcceeecccccceEEEEEe--CCCcEEEEEEEeccCC--chHHHHHHHHHHHHhC---CCCCceeEEEEEe---
Q 046544 489 RATNGFSENNLIGRGGFGSVYKARL--GDGMEVAVKVFNLQCG--RAFKSFAVECEMMKSI---RHRNLIKVISSCS--- 558 (646)
Q Consensus 489 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~H~niv~~~~~~~--- 558 (646)
...++|+..+.||+|+||.||+|+. .+|+.||+|++..... .....+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 3457899999999999999999997 3688999999875432 2223566777777665 8999999999987
Q ss_pred --cCCeeEEEEEecCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEe
Q 046544 559 --NEEFKALVLEYKPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSD 635 (646)
Q Consensus 559 --~~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~D 635 (646)
.....++||||++ |+|.+++.... ..+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEec
Confidence 4567899999997 59999997654 35899999999999999999999 88999999999999999999999999
Q ss_pred ecCccccc
Q 046544 636 FGIAKLLI 643 (646)
Q Consensus 636 fGla~~~~ 643 (646)
||+++...
T Consensus 164 fg~~~~~~ 171 (326)
T 1blx_A 164 FGLARIYS 171 (326)
T ss_dssp CCSCCCCC
T ss_pred Cccccccc
Confidence 99998653
No 327
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.88 E-value=7.2e-23 Score=214.33 Aligned_cols=146 Identities=24% Similarity=0.342 Sum_probs=126.3
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC--chHHHHHHHHHHHHhCCCCCceeEEEEEecCCee----
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG--RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFK---- 563 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~---- 563 (646)
.++|...+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 368899999999999999999865 699999999976432 3356788999999999999999999999877654
Q ss_pred --EEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccc
Q 046544 564 --ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641 (646)
Q Consensus 564 --~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~ 641 (646)
++||||+. ++|.+++.. .+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+|+.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 588887733 4899999999999999999999 88999999999999999999999999999986
Q ss_pred cc
Q 046544 642 LI 643 (646)
Q Consensus 642 ~~ 643 (646)
..
T Consensus 194 ~~ 195 (371)
T 4exu_A 194 AD 195 (371)
T ss_dssp --
T ss_pred cc
Confidence 53
No 328
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.88 E-value=6.4e-23 Score=231.78 Aligned_cols=145 Identities=22% Similarity=0.359 Sum_probs=125.9
Q ss_pred CCCCcceeecccccceEEEEEeC--CCcEEEEEEEeccCC-chHHHHHHHHHHHHhCCCCCceeEEEEEecCCe-----e
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG-RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEF-----K 563 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~-----~ 563 (646)
++|++.+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|++++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 68999999999999999999975 689999998865432 344578899999999999999999999987655 6
Q ss_pred EEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 564 ALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 564 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|+||||++|++|.+++.. .+++.++..++.||+.||+|+| .++|+||||||+||+++.+ .+||+|||+++...
T Consensus 160 ~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp EEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 999999999999987754 5899999999999999999999 8899999999999999876 89999999998764
No 329
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.88 E-value=2e-22 Score=214.97 Aligned_cols=147 Identities=23% Similarity=0.325 Sum_probs=128.2
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhC------CCCCceeEEEEEecCCeeE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSI------RHRNLIKVISSCSNEEFKA 564 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~H~niv~~~~~~~~~~~~~ 564 (646)
.+|+..+.||+|+||.||+|+.. +++.||||++... ....+.+.+|+++++.+ .|+||+++++++...+..+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 57899999999999999999865 6899999998753 23345677888888776 5779999999999999999
Q ss_pred EEEEecCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCc--EEEEeecCccc
Q 046544 565 LVLEYKPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLV--AYLSDFGIAKL 641 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~--~ki~DfGla~~ 641 (646)
+||||+. ++|.+++.... ..+++..+..++.|++.||+||| ..+|+||||||+||+++.++. +||+|||+|+.
T Consensus 176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~ 251 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence 9999996 59999987654 35899999999999999999999 889999999999999998887 99999999976
Q ss_pred cc
Q 046544 642 LI 643 (646)
Q Consensus 642 ~~ 643 (646)
..
T Consensus 252 ~~ 253 (429)
T 3kvw_A 252 EH 253 (429)
T ss_dssp TT
T ss_pred cC
Confidence 43
No 330
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.88 E-value=1.3e-22 Score=207.23 Aligned_cols=149 Identities=23% Similarity=0.355 Sum_probs=131.0
Q ss_pred HHhCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccC--CchHHHHHHHHHHHHhCC--CCCceeEEEEEecCCeeE
Q 046544 489 RATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIR--HRNLIKVISSCSNEEFKA 564 (646)
Q Consensus 489 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--H~niv~~~~~~~~~~~~~ 564 (646)
...++|+..+.||+|+||.||+|+..+++.||+|++.... ....+.+.+|++++++++ ||||+++++++..++..+
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 104 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence 3446799999999999999999998889999999997553 234567889999999997 599999999999999999
Q ss_pred EEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 565 LVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
+||| +.+++|.+++.... .+++..+..++.|+++|+.||| ..+|+||||||+||++++ +.+||+|||+++.+.
T Consensus 105 lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ 177 (313)
T ss_dssp EEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred EEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeecccccccc
Confidence 9999 55889999998764 6889999999999999999999 889999999999999975 799999999998653
No 331
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.88 E-value=2.1e-22 Score=207.14 Aligned_cols=148 Identities=26% Similarity=0.339 Sum_probs=126.1
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC-chHHHHHHHHH-HHHhCCCCCceeEEEEEecCCeeEEEEE
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG-RAFKSFAVECE-MMKSIRHRNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~-~l~~l~H~niv~~~~~~~~~~~~~lv~e 568 (646)
++|+..+.||+|+||.||+|+.. +|+.||||++..... ....++.+|+. +++.++||||+++++++..++..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 67888999999999999999975 799999999986543 23345666666 6777899999999999999999999999
Q ss_pred ecCCCCHHHHHhh----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 569 YKPHGSLEKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGCLA-PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 569 ~~~~g~L~~~l~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
|+++ ++.+++.. ....+++..+..++.|++.|+.||| .. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 9975 78777753 2457899999999999999999999 77 99999999999999999999999999998653
No 332
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.88 E-value=1.1e-22 Score=215.60 Aligned_cols=144 Identities=26% Similarity=0.386 Sum_probs=115.0
Q ss_pred CCc-ceeecccccceEEEEEeC---CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEec--CCeeEEEE
Q 046544 494 FSE-NNLIGRGGFGSVYKARLG---DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN--EEFKALVL 567 (646)
Q Consensus 494 ~~~-~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~--~~~~~lv~ 567 (646)
|.. .++||+|+||.||+|+.. +++.||+|++.... ..+.+.+|+++++.++||||+++++++.. ....++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 544 568999999999999965 57889999986443 23567899999999999999999999954 67899999
Q ss_pred EecCCCCHHHHHhhC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEE----cCCCcEEEEe
Q 046544 568 EYKPHGSLEKYLYSS--------NCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL----DDNLVAYLSD 635 (646)
Q Consensus 568 e~~~~g~L~~~l~~~--------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~----~~~~~~ki~D 635 (646)
||+++ +|.+++... ...+++..+..++.|++.||+||| ..+|+||||||+||++ +.++.+||+|
T Consensus 100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 99965 888877532 124889999999999999999999 8899999999999999 6778999999
Q ss_pred ecCccccc
Q 046544 636 FGIAKLLI 643 (646)
Q Consensus 636 fGla~~~~ 643 (646)
||+|+.+.
T Consensus 176 fg~a~~~~ 183 (405)
T 3rgf_A 176 MGFARLFN 183 (405)
T ss_dssp TTCCC---
T ss_pred CCCceecC
Confidence 99998653
No 333
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.88 E-value=1.2e-22 Score=214.84 Aligned_cols=133 Identities=26% Similarity=0.330 Sum_probs=113.4
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCC--------CCCceeEEEEEe----
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR--------HRNLIKVISSCS---- 558 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------H~niv~~~~~~~---- 558 (646)
++|+..+.||+|+||.||+|+.. +++.||||++... ....+.+.+|+++++.++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 67999999999999999999864 6899999998743 234567889999999885 788999999987
Q ss_pred cCCeeEEEEEecCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCEEEcCCC
Q 046544 559 NEEFKALVLEYKPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGCLA-PVIHCDLKPDNVLLDDNL 629 (646)
Q Consensus 559 ~~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~iiHrdlk~~Nil~~~~~ 629 (646)
.....++||||+ ++++.+++... ...+++..+..++.|++.||+||| .+ +|+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~ 184 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNE 184 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccc
Confidence 456789999999 55666666544 356899999999999999999999 76 999999999999998775
No 334
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.88 E-value=3.5e-22 Score=208.37 Aligned_cols=156 Identities=24% Similarity=0.327 Sum_probs=119.0
Q ss_pred HHHHHHhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEecCC--
Q 046544 485 LELCRATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSNEE-- 561 (646)
Q Consensus 485 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~-- 561 (646)
.+.....++|+..+.||+|+||.||+|+.. +|+.||||++.... .....+.+|++.++.++||||+++++++...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 445667789999999999999999999975 68999999986543 22345677888889999999999999986533
Q ss_pred -----eeEEEEEecCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcC-CCcEE
Q 046544 562 -----FKALVLEYKPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD-NLVAY 632 (646)
Q Consensus 562 -----~~~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~-~~~~k 632 (646)
..++||||+++ ++.+.+.. ....+++..+..++.|++.|+.|+|.. .++|+||||||+||+++. ++.+|
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEE
Confidence 27899999986 55544432 345688899999999999999999943 679999999999999996 89999
Q ss_pred EEeecCccccc
Q 046544 633 LSDFGIAKLLI 643 (646)
Q Consensus 633 i~DfGla~~~~ 643 (646)
|+|||+|+.+.
T Consensus 173 l~Dfg~a~~~~ 183 (360)
T 3e3p_A 173 LCDFGSAKKLS 183 (360)
T ss_dssp ECCCTTCBCCC
T ss_pred EeeCCCceecC
Confidence 99999998764
No 335
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.88 E-value=2e-23 Score=213.82 Aligned_cols=148 Identities=26% Similarity=0.473 Sum_probs=128.5
Q ss_pred HHhCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEE
Q 046544 489 RATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALV 566 (646)
Q Consensus 489 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv 566 (646)
...++|+..+.||+|+||.||+|+.+. .||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 345788999999999999999998754 49999987543 23345677899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 567 LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
|||+++++|.+++...+..+++..+..++.|++.|++||| ..+|+||||||+||+++ ++.+||+|||+|+..
T Consensus 108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp CBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred eecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 9999999999999877667899999999999999999999 88999999999999998 679999999997754
No 336
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.88 E-value=1e-22 Score=208.77 Aligned_cols=151 Identities=25% Similarity=0.341 Sum_probs=131.7
Q ss_pred HHhCCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccCCc------hHHHHHHHHHHHHhCC--CCCceeEEEEEec
Q 046544 489 RATNGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGR------AFKSFAVECEMMKSIR--HRNLIKVISSCSN 559 (646)
Q Consensus 489 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--H~niv~~~~~~~~ 559 (646)
...++|+..+.||+|+||.||+|+. .+++.||||++...... ..+.+.+|+.++++++ ||||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3446899999999999999999986 47899999999755321 2245667999999996 5999999999999
Q ss_pred CCeeEEEEEecCC-CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEc-CCCcEEEEeec
Q 046544 560 EEFKALVLEYKPH-GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLD-DNLVAYLSDFG 637 (646)
Q Consensus 560 ~~~~~lv~e~~~~-g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~-~~~~~ki~DfG 637 (646)
++..++||||+.+ ++|.+++.... .+++..+..++.|++.||+||| ..+|+||||||+||+++ +++.+||+|||
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred CCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 9999999999986 89999987643 6889999999999999999999 88999999999999999 78999999999
Q ss_pred Cccccc
Q 046544 638 IAKLLI 643 (646)
Q Consensus 638 la~~~~ 643 (646)
+++.+.
T Consensus 196 ~~~~~~ 201 (320)
T 3a99_A 196 SGALLK 201 (320)
T ss_dssp TCEECC
T ss_pred cccccc
Confidence 998764
No 337
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.87 E-value=1.1e-22 Score=211.53 Aligned_cols=144 Identities=24% Similarity=0.352 Sum_probs=126.5
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC--chHHHHHHHHHHHHhCCCCCceeEEEEEecCCe------
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG--RAFKSFAVECEMMKSIRHRNLIKVISSCSNEEF------ 562 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~------ 562 (646)
++|...+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.+++.++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 67889999999999999999865 699999999975432 234678899999999999999999999987654
Q ss_pred eEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 563 KALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 563 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
.++||||++ |+|.+++.. .+++..+..++.|++.|++||| .++|+||||||+||+++.++.+||+|||+++..
T Consensus 104 ~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred EEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 499999997 588887643 4899999999999999999999 889999999999999999999999999999864
No 338
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.87 E-value=3.4e-22 Score=206.38 Aligned_cols=147 Identities=20% Similarity=0.305 Sum_probs=128.6
Q ss_pred CCCCcceeecccccceEEEEEe--CCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCC------CceeEEEEEecCCee
Q 046544 492 NGFSENNLIGRGGFGSVYKARL--GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHR------NLIKVISSCSNEEFK 563 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~------niv~~~~~~~~~~~~ 563 (646)
++|+..+.||+|+||.||+|.. .+++.||+|+++.. ....+.+.+|+++++.++|+ +|+++++++...+..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 6899999999999999999986 36889999998643 23456788899999888665 499999999999999
Q ss_pred EEEEEecCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcC---------------
Q 046544 564 ALVLEYKPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD--------------- 627 (646)
Q Consensus 564 ~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~--------------- 627 (646)
++||||+ +++|.+++...+ ..+++..+..++.|++.||+||| .++|+||||||+||+++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~ 168 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDE 168 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCcccccc
Confidence 9999999 889999997764 36789999999999999999999 889999999999999987
Q ss_pred ----CCcEEEEeecCccccc
Q 046544 628 ----NLVAYLSDFGIAKLLI 643 (646)
Q Consensus 628 ----~~~~ki~DfGla~~~~ 643 (646)
++.+||+|||+|+...
T Consensus 169 ~~~~~~~~kl~Dfg~~~~~~ 188 (339)
T 1z57_A 169 RTLINPDIKVVDFGSATYDD 188 (339)
T ss_dssp EEESCCCEEECCCSSCEETT
T ss_pred ccccCCCceEeeCcccccCc
Confidence 6689999999998643
No 339
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.87 E-value=5e-22 Score=204.96 Aligned_cols=146 Identities=22% Similarity=0.320 Sum_probs=120.4
Q ss_pred hCCCCcc-eeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCceeEEEEEec----CCeeE
Q 046544 491 TNGFSEN-NLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNLIKVISSCSN----EEFKA 564 (646)
Q Consensus 491 ~~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~----~~~~~ 564 (646)
.++|... +.||+|+||.||+|+.. +|+.||+|++.... +........++.++||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 3678874 56999999999999976 69999999986431 112223334667799999999999876 44589
Q ss_pred EEEEecCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcC---CCcEEEEeecCcc
Q 046544 565 LVLEYKPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAK 640 (646)
Q Consensus 565 lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~---~~~~ki~DfGla~ 640 (646)
+||||+++|+|.+++.... ..+++.++..++.|++.|++||| ..+|+||||||+||+++. ++.+||+|||+|+
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 9999999999999998764 36899999999999999999999 889999999999999975 4569999999998
Q ss_pred ccc
Q 046544 641 LLI 643 (646)
Q Consensus 641 ~~~ 643 (646)
...
T Consensus 180 ~~~ 182 (336)
T 3fhr_A 180 ETT 182 (336)
T ss_dssp EC-
T ss_pred ecc
Confidence 653
No 340
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=4.6e-22 Score=199.26 Aligned_cols=145 Identities=17% Similarity=0.130 Sum_probs=116.0
Q ss_pred HHHHHHHhCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCC------------------chHHHHHHHHHHHHhC
Q 046544 484 YLELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCG------------------RAFKSFAVECEMMKSI 545 (646)
Q Consensus 484 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l 545 (646)
...+......|...+.||+|+||.||+|+..+|+.||+|+++.... .....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 3444555567788899999999999999997799999999864321 1345688999999999
Q ss_pred CCCCceeEEEEEecCCeeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEE
Q 046544 546 RHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL 625 (646)
Q Consensus 546 ~H~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~ 625 (646)
+|+++ .+++.. +..|+||||++||+|.+ +.. .....++.|++.|++|+| ..+|+||||||+||++
T Consensus 162 ~~~~v---~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl 226 (282)
T 1zar_A 162 QGLAV---PKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLV 226 (282)
T ss_dssp TTSSS---CCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEE
T ss_pred cCCCc---CeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEE
Confidence 85444 444332 55799999999999998 422 124569999999999999 8899999999999999
Q ss_pred cCCCcEEEEeecCcccccC
Q 046544 626 DDNLVAYLSDFGIAKLLIG 644 (646)
Q Consensus 626 ~~~~~~ki~DfGla~~~~~ 644 (646)
+ ++.+||+|||+|+....
T Consensus 227 ~-~~~vkl~DFG~a~~~~~ 244 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVEVGE 244 (282)
T ss_dssp E-TTEEEECCCTTCEETTS
T ss_pred E-CCcEEEEECCCCeECCC
Confidence 9 99999999999987643
No 341
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.87 E-value=3.1e-22 Score=204.89 Aligned_cols=149 Identities=24% Similarity=0.288 Sum_probs=118.0
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCc-hH-HHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEEE
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGR-AF-KSFAVECEMMKSIRHRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~-~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 567 (646)
.++|+..+.||+|+||.||+|+.. +|+.||||++...... .. +.+..+..+++.++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 367888999999999999999975 7899999999865432 22 23444555678889999999999999999999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCEEEcCCCcEEEEeecCccccc
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLA-PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~ 643 (646)
||+ ++.+..+.......+++..+..++.|++.|+.||| .. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 999 55666666554557899999999999999999999 74 99999999999999999999999999997653
No 342
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=4e-22 Score=217.80 Aligned_cols=147 Identities=28% Similarity=0.335 Sum_probs=69.5
Q ss_pred CCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccccccccccccccccCC
Q 046544 210 QKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFS 289 (646)
Q Consensus 210 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~ 289 (646)
++|++|+|++|+|++ +|. |.. +|++|+|++|+|++ +|. .+++|+.|+|++|.|+.+|. .+++|+.|+++
T Consensus 100 ~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls 168 (571)
T 3cvr_A 100 ASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTMLPE---LPTSLEVLSVR 168 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC---CCTTCCEEECC
T ss_pred CCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCcCCC---cCCCcCEEECC
Confidence 444444444444443 232 322 44444444444443 222 33444444444444444443 23444444444
Q ss_pred CCcccCCCCCccCccccceEEEcccccccccCccccCCCCCC-------CEEEccCccCCCcccccccCCCCCCEEEccC
Q 046544 290 SNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNL-------EYLFLGYNRLEGSIPDSFGDLISLKFLNLSN 362 (646)
Q Consensus 290 ~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 362 (646)
+|.+++ +|. |. ++|+.|++++|.|+. +|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++
T Consensus 169 ~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~-lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~ 239 (571)
T 3cvr_A 169 NNQLTF-LPE-LP--ESLEALDVSTNLLES-LPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILED 239 (571)
T ss_dssp SSCCSC-CCC-CC--TTCCEEECCSSCCSS-CCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCS
T ss_pred CCCCCC-cch-hh--CCCCEEECcCCCCCc-hhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeC
Confidence 444443 222 33 445555555555552 222 332 44 66666666666 3455555566666666666
Q ss_pred CcCcccCCccccCC
Q 046544 363 NNLSGAIPTSLEKL 376 (646)
Q Consensus 363 N~l~~~~p~~~~~l 376 (646)
|++++.+|..+..+
T Consensus 240 N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 240 NPLSSRIRESLSQQ 253 (571)
T ss_dssp SSCCHHHHHHHHHH
T ss_pred CcCCCcCHHHHHHh
Confidence 66666666655543
No 343
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=5.4e-22 Score=189.88 Aligned_cols=156 Identities=29% Similarity=0.319 Sum_probs=81.0
Q ss_pred CCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccccccccccccccccCCC
Q 046544 211 KLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSS 290 (646)
Q Consensus 211 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~ 290 (646)
+|++|++++|++++..+..|..+++|++|++++|++++..+..|.++++|++|++++|.++.+|.
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--------------- 93 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPN--------------- 93 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT---------------
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCH---------------
Confidence 45555555555554444445555555555555555554444445555555555555555554432
Q ss_pred CcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCC
Q 046544 291 NFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIP 370 (646)
Q Consensus 291 N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 370 (646)
..|..+++|+.|++++|.+++..+..|..+++|++|++++|++++..+..|..+++|+.|++++|.+.+
T Consensus 94 --------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~--- 162 (208)
T 2o6s_A 94 --------GVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC--- 162 (208)
T ss_dssp --------TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC---
T ss_pred --------hHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec---
Confidence 233344444444444444444444445555555555555555554444445555555555555555442
Q ss_pred ccccCCCCCCceeCcCCcceeeccCC
Q 046544 371 TSLEKLSYLEDLNLSFNKLEGEIPRG 396 (646)
Q Consensus 371 ~~~~~l~~L~~L~L~~N~l~~~~p~~ 396 (646)
.++.|+.|+++.|+++|.+|..
T Consensus 163 ----~~~~l~~L~~~~n~~~g~ip~~ 184 (208)
T 2o6s_A 163 ----TCPGIRYLSEWINKHSGVVRNS 184 (208)
T ss_dssp ----CTTTTHHHHHHHHHCTTTBBCT
T ss_pred ----CCCCHHHHHHHHHhCCceeecc
Confidence 2345555556666666555543
No 344
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.87 E-value=2e-22 Score=214.67 Aligned_cols=145 Identities=25% Similarity=0.435 Sum_probs=122.5
Q ss_pred CCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhC-CCCCceeEEEEEecCCeeEEEEEec
Q 046544 492 NGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYK 570 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~ 570 (646)
.+|...+.||+|+||+||.....+|+.||||++..... ..+.+|+++++.+ +|||||++++++...+..|+|||||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 45888899999999997655566899999999865432 2346799999999 8999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcC-----CCcEEEEeecCccccc
Q 046544 571 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDD-----NLVAYLSDFGIAKLLI 643 (646)
Q Consensus 571 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~-----~~~~ki~DfGla~~~~ 643 (646)
+ |+|.+++........+..+..++.|++.||+||| +.+|+||||||+||+++. ...+||+|||+|+.+.
T Consensus 101 ~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 101 A-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp S-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred C-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 6 5999999877655555567889999999999999 889999999999999953 3468899999998754
No 345
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.87 E-value=8.4e-22 Score=207.14 Aligned_cols=151 Identities=25% Similarity=0.343 Sum_probs=128.5
Q ss_pred HhCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCC-CC-----CceeEEEEEecCCe
Q 046544 490 ATNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR-HR-----NLIKVISSCSNEEF 562 (646)
Q Consensus 490 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~-----niv~~~~~~~~~~~ 562 (646)
..++|+..+.||+|+||+||+|+.. +++.||||++... ....+++.+|+++++.++ |+ +|+++++++..++.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 3478999999999999999999865 6889999998743 233456778888888874 55 49999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEc--CCCcEEEEeecCc
Q 046544 563 KALVLEYKPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLD--DNLVAYLSDFGIA 639 (646)
Q Consensus 563 ~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~--~~~~~ki~DfGla 639 (646)
.++||||++ |+|.+++.... ..+++..+..++.|++.|+.|||+. ..+|+||||||+||+++ .++.+||+|||+|
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 999999996 59999998764 4689999999999999999999942 47899999999999994 5788999999999
Q ss_pred cccc
Q 046544 640 KLLI 643 (646)
Q Consensus 640 ~~~~ 643 (646)
+...
T Consensus 209 ~~~~ 212 (382)
T 2vx3_A 209 CQLG 212 (382)
T ss_dssp EETT
T ss_pred eecc
Confidence 8753
No 346
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.87 E-value=4.5e-22 Score=212.60 Aligned_cols=144 Identities=27% Similarity=0.370 Sum_probs=119.3
Q ss_pred CCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhC-CCCCceeEEEEEecCCeeEEEEEecC
Q 046544 493 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYKP 571 (646)
Q Consensus 493 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~~ 571 (646)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++..++..|+|||||.
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 45557889999999998776668999999998754 235678899999876 89999999999999999999999995
Q ss_pred CCCHHHHHhhCCCCC------CHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCC-------------CcEE
Q 046544 572 HGSLEKYLYSSNCIL------DIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDN-------------LVAY 632 (646)
Q Consensus 572 ~g~L~~~l~~~~~~l------~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~-------------~~~k 632 (646)
|+|.+++....... ++..+..++.|++.||+||| +.+|+||||||+||+++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 69999997654211 22235679999999999999 8899999999999999754 4899
Q ss_pred EEeecCccccc
Q 046544 633 LSDFGIAKLLI 643 (646)
Q Consensus 633 i~DfGla~~~~ 643 (646)
|+|||+|+.+.
T Consensus 169 L~DFG~a~~~~ 179 (434)
T 2rio_A 169 ISDFGLCKKLD 179 (434)
T ss_dssp ECCCTTCEECC
T ss_pred EcccccceecC
Confidence 99999998764
No 347
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=1.2e-21 Score=187.44 Aligned_cols=130 Identities=27% Similarity=0.282 Sum_probs=69.6
Q ss_pred CcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecC
Q 046544 164 LKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGG 243 (646)
Q Consensus 164 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 243 (646)
+++|++++|++++..+..+..+++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++
T Consensus 30 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 109 (208)
T 2o6s_A 30 TTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNT 109 (208)
T ss_dssp CSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCC
Confidence 33333333333333444455556666666666666655555555566666666666666555555555556666666666
Q ss_pred CcccccCCccccCCCCCceeecCCCcccccccc-cccccccccccCCCCcc
Q 046544 244 NKLFGSIPACFSNLASLRILSLSSNELTSIPLT-FWNLKDILQLNFSSNFL 293 (646)
Q Consensus 244 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~L~l~~N~l 293 (646)
|++++..+..|..+++|++|++++|.++.+|.. +..+++|+.|++++|.+
T Consensus 110 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 160 (208)
T 2o6s_A 110 NQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 160 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCB
T ss_pred CcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCe
Confidence 665555555555555555555555555555432 33444444444444443
No 348
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.86 E-value=6.4e-22 Score=190.91 Aligned_cols=152 Identities=22% Similarity=0.327 Sum_probs=73.3
Q ss_pred cEEEecCCcccccCCccccCCCCCceeecCCCccccccc-ccccccccccccCCCCcccCCCCCccCccccceEEEcccc
Q 046544 237 YELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPL-TFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMN 315 (646)
Q Consensus 237 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N 315 (646)
+.+++++|.++.+ |..+. ++|+.|++++|.|+.+|. .|..+++|+.|++++|.+++..|..|.++++|+.|+|++|
T Consensus 14 ~~v~c~~~~l~~i-P~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTEI-PTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSSC-CSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCcC-CCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 3455555555422 22222 345555555555555443 3444455555555555554444444555555555555555
Q ss_pred cccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCccee
Q 046544 316 NFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEG 391 (646)
Q Consensus 316 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 391 (646)
.++++.+..|.++++|++|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 5544444444445555555555555544444444445555555555555544444444444444444444444444
No 349
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.86 E-value=1.3e-22 Score=223.35 Aligned_cols=150 Identities=30% Similarity=0.464 Sum_probs=128.4
Q ss_pred hCCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccC-CchHHHHHHHHHHHHhCCCCCceeEEEEEec------CCe
Q 046544 491 TNGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRAFKSFAVECEMMKSIRHRNLIKVISSCSN------EEF 562 (646)
Q Consensus 491 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~~~~~~~~------~~~ 562 (646)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 368999999999999999999864 68999999987543 3345678999999999999999999998765 667
Q ss_pred eEEEEEecCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCc---EEEEeec
Q 046544 563 KALVLEYKPHGSLEKYLYSSN--CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLV---AYLSDFG 637 (646)
Q Consensus 563 ~~lv~e~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~---~ki~DfG 637 (646)
.++||||++||+|.+++.... ..+++..+..++.|++.|++||| ..+|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999998654 25788889999999999999999 889999999999999986654 9999999
Q ss_pred Cccccc
Q 046544 638 IAKLLI 643 (646)
Q Consensus 638 la~~~~ 643 (646)
+|+...
T Consensus 170 ~a~~~~ 175 (676)
T 3qa8_A 170 YAKELD 175 (676)
T ss_dssp CCCBTT
T ss_pred cccccc
Confidence 998754
No 350
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=8.9e-22 Score=215.03 Aligned_cols=183 Identities=26% Similarity=0.294 Sum_probs=157.0
Q ss_pred CCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecC
Q 046544 187 NSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLS 266 (646)
Q Consensus 187 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 266 (646)
+++.|++++|.+++ +|..+ .++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. |.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 89999999999997 45444 278999999999999 566 457899999999999997 555 665 99999999
Q ss_pred CCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCccc
Q 046544 267 SNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIP 346 (646)
Q Consensus 267 ~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 346 (646)
+|.|+.+|. .+++|+.|++++|.+++ +|. .+++|+.|++++|.+++ +|. |. ++|+.|+|++|+|+ .+|
T Consensus 129 ~N~l~~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 129 NNQLTMLPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SSCCSCCCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CCcCCCCCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 999999997 68999999999999997 554 57899999999999998 555 66 89999999999999 566
Q ss_pred ccccCCCCC-------CEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccCC
Q 046544 347 DSFGDLISL-------KFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRG 396 (646)
Q Consensus 347 ~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 396 (646)
. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|..
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~ 249 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRES 249 (571)
T ss_dssp C-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHH
T ss_pred h-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHH
Confidence 6 665 77 99999999999 68888888999999999999999987753
No 351
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.86 E-value=4.3e-22 Score=192.14 Aligned_cols=136 Identities=27% Similarity=0.315 Sum_probs=99.3
Q ss_pred CceeecCCCccccccc--ccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEcc
Q 046544 260 LRILSLSSNELTSIPL--TFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLG 337 (646)
Q Consensus 260 L~~L~L~~N~l~~lp~--~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls 337 (646)
++.|+|++|.|+.++. .|..+++|+.|++++|.+++..+..|..+++|+.|++++|.++++.+..|+++++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 3444455554444421 24445555555555555555555567777777788888888877777778888888888888
Q ss_pred CccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccC
Q 046544 338 YNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPR 395 (646)
Q Consensus 338 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 395 (646)
+|++++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+++|.++.
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 8888887788888888888888888888887788888888888888888888887664
No 352
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.86 E-value=1.2e-21 Score=203.70 Aligned_cols=147 Identities=22% Similarity=0.327 Sum_probs=126.7
Q ss_pred CCCCcceeecccccceEEEEEeC-CC-cEEEEEEEeccCCchHHHHHHHHHHHHhCCCCC------ceeEEEEEecCCee
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DG-MEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRN------LIKVISSCSNEEFK 563 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~~~~~~~~~~~~ 563 (646)
++|+..+.||+|+||.||+|+.. ++ +.||+|+++.. ....+.+.+|+++++.++|++ ++.+.+++...+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 68999999999999999999864 44 78999998743 234567788999999987765 99999999999999
Q ss_pred EEEEEecCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEE-----------------
Q 046544 564 ALVLEYKPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLL----------------- 625 (646)
Q Consensus 564 ~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~----------------- 625 (646)
++||||+ ++++.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||++
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~ 173 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEE 173 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccccccccc
Confidence 9999999 567777776554 46899999999999999999999 8899999999999999
Q ss_pred --cCCCcEEEEeecCccccc
Q 046544 626 --DDNLVAYLSDFGIAKLLI 643 (646)
Q Consensus 626 --~~~~~~ki~DfGla~~~~ 643 (646)
+.++.+||+|||+|+...
T Consensus 174 ~~~~~~~~kl~Dfg~~~~~~ 193 (355)
T 2eu9_A 174 KSVKNTSIRVADFGSATFDH 193 (355)
T ss_dssp EEESCCCEEECCCTTCEETT
T ss_pred cccCCCcEEEeecCcccccc
Confidence 567899999999998643
No 353
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.85 E-value=9.5e-22 Score=189.74 Aligned_cols=151 Identities=23% Similarity=0.280 Sum_probs=90.4
Q ss_pred CeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCccccc-ccccccccccccccCCCC
Q 046544 213 QGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSI-PLTFWNLKDILQLNFSSN 291 (646)
Q Consensus 213 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l-p~~~~~l~~L~~L~l~~N 291 (646)
+.+++++|.++ .+|..+. ++|++|+|++|+|+++.+..|.++++|++|+|++|.|+.+ |..|.++++|++|++++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 35566666665 3343332 4566666666666655555666666666666666666655 445556666666666666
Q ss_pred cccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCc
Q 046544 292 FLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLS 366 (646)
Q Consensus 292 ~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 366 (646)
.++...+..|..+++|+.|+|++|.++++.|..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 666555555566666666666666666665666666666666666666666555555666666666666666654
No 354
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.85 E-value=8.1e-22 Score=206.57 Aligned_cols=147 Identities=19% Similarity=0.296 Sum_probs=126.5
Q ss_pred CCCCcceeecccccceEEEEEe-CCCcEEEEEEEeccCCchHHHHHHHHHHHHhCC-----------CCCceeEEEEEec
Q 046544 492 NGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR-----------HRNLIKVISSCSN 559 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------H~niv~~~~~~~~ 559 (646)
.+|+..+.||+|+||.||+|+. .+++.||||++... ....+.+.+|++++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 6799999999999999999996 47899999998743 233467788999998876 8999999999876
Q ss_pred CC----eeEEEEEecCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCEEEc------C
Q 046544 560 EE----FKALVLEYKPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGCLA-PVIHCDLKPDNVLLD------D 627 (646)
Q Consensus 560 ~~----~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~iiHrdlk~~Nil~~------~ 627 (646)
.+ ..++||||+ +++|.+++.... ..+++..+..++.|++.||+||| .+ +|+||||||+||+++ .
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTTT
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCcC
Confidence 54 789999999 889999997643 45899999999999999999999 76 999999999999994 4
Q ss_pred CCcEEEEeecCccccc
Q 046544 628 NLVAYLSDFGIAKLLI 643 (646)
Q Consensus 628 ~~~~ki~DfGla~~~~ 643 (646)
.+.+||+|||+|+...
T Consensus 174 ~~~~kl~Dfg~a~~~~ 189 (373)
T 1q8y_A 174 LIQIKIADLGNACWYD 189 (373)
T ss_dssp EEEEEECCCTTCEETT
T ss_pred cceEEEcccccccccC
Confidence 4589999999998654
No 355
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.85 E-value=2.6e-21 Score=186.67 Aligned_cols=159 Identities=23% Similarity=0.214 Sum_probs=144.2
Q ss_pred CceeecCCCcccccccccccccccccccCCCCcccCCCC-CccCccccceEEEcccccccccCccccCCCCCCCEEEccC
Q 046544 260 LRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLP-LEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGY 338 (646)
Q Consensus 260 L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 338 (646)
-+.+++++|.++++|..+. ..++.|++++|.+++..+ ..|..+++|+.|++++|.++++.+..|+++++|++|+|++
T Consensus 13 ~~~l~~s~n~l~~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 13 GTTVDCSNQKLNKIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TTEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEeEeCCCCcccCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 3589999999999998664 356899999999998755 5689999999999999999999889999999999999999
Q ss_pred ccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccCC-CCCCCCccccccCCccccCCC
Q 046544 339 NRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRG-GSFGNFAAESFEGNELLCGSP 417 (646)
Q Consensus 339 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~~~~~~~~~~~N~~~c~~~ 417 (646)
|++++..+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|++++..|.. ..+.+++.+++++|+|.|+|+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9999999999999999999999999999999999999999999999999999986755 558899999999999999887
Q ss_pred Ccc
Q 046544 418 TLQ 420 (646)
Q Consensus 418 ~~~ 420 (646)
..+
T Consensus 171 l~~ 173 (220)
T 2v70_A 171 LAW 173 (220)
T ss_dssp GHH
T ss_pred hHH
Confidence 643
No 356
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.85 E-value=1.4e-21 Score=213.47 Aligned_cols=135 Identities=19% Similarity=0.240 Sum_probs=106.7
Q ss_pred CcceeecccccceEEEEEeCCCcEEEEEEEeccCC--c------hHHHHHHHHHHHHhCCCCCceeEEEEEecCCeeEEE
Q 046544 495 SENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCG--R------AFKSFAVECEMMKSIRHRNLIKVISSCSNEEFKALV 566 (646)
Q Consensus 495 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~------~~~~~~~e~~~l~~l~H~niv~~~~~~~~~~~~~lv 566 (646)
...+.||+|+||.||+|+. .++.+|+|....+.. . ..+++.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 578889998654321 1 134578999999999999999555555567778999
Q ss_pred EEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEEcCCCcEEEEeecCcccccC
Q 046544 567 LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG 644 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~~~~ 644 (646)
|||++|++|.+++.. +..++.|+++|++||| +++|+||||||+||+++. .+||+|||+|+....
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999865 4579999999999999 889999999999999998 999999999998643
No 357
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.85 E-value=1.5e-21 Score=203.36 Aligned_cols=180 Identities=27% Similarity=0.270 Sum_probs=116.1
Q ss_pred CEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhc-CCCCCcEEEecCCcccccCCccccCCCCCceeecCC
Q 046544 189 ITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSIC-RLTELYELELGGNKLFGSIPACFSNLASLRILSLSS 267 (646)
Q Consensus 189 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 267 (646)
+.+++++|.++.+ |..+. ..++.|+|++|+|++..+..|. .+++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~~i-P~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPNV-PQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSSC-CSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCcc-CccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 4677777777643 33332 3466677777777666666665 666677777777766666666666666666666666
Q ss_pred CcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccc
Q 046544 268 NELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPD 347 (646)
Q Consensus 268 N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 347 (646)
|+|+.+| +..|..+++|+.|+|++|.++++.|..|.++++|+.|+|++|+|++..+.
T Consensus 98 N~l~~~~-----------------------~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~ 154 (361)
T 2xot_A 98 NHLHTLD-----------------------EFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVE 154 (361)
T ss_dssp SCCCEEC-----------------------TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGG
T ss_pred CcCCcCC-----------------------HHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHH
Confidence 6666554 33455556666666666666666666777777777777777777755555
Q ss_pred cc---cCCCCCCEEEccCCcCcccCCccccCCCC--CCceeCcCCcceeecc
Q 046544 348 SF---GDLISLKFLNLSNNNLSGAIPTSLEKLSY--LEDLNLSFNKLEGEIP 394 (646)
Q Consensus 348 ~~---~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~p 394 (646)
.| ..+++|+.|||++|+|++..+..+..++. ++.|+|++|++.|.+.
T Consensus 155 ~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 155 LIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp GTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred HhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 55 45777777777777777555566666665 3677777777776543
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.85 E-value=2.8e-21 Score=194.94 Aligned_cols=172 Identities=26% Similarity=0.314 Sum_probs=96.4
Q ss_pred ccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCce
Q 046544 183 TNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRI 262 (646)
Q Consensus 183 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 262 (646)
..+++|+.|++++|.+... + .+..+++|++|++++|++++..+ +..+++|++|++++|++++. + .+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL-S-SLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG-G-GGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC-h-hhccCCCCCE
Confidence 3445555555555555533 1 24445555555555555554332 55555555555555555432 1 2444555555
Q ss_pred eecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCC
Q 046544 263 LSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLE 342 (646)
Q Consensus 263 L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 342 (646)
|++++|.++.+ ..+..+++|+.|++++|.+++. ..++.+++|+.|++++|+++
T Consensus 117 L~L~~n~i~~~-------------------------~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~ 169 (291)
T 1h6t_A 117 LSLEHNGISDI-------------------------NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS 169 (291)
T ss_dssp EECTTSCCCCC-------------------------GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred EECCCCcCCCC-------------------------hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccc
Confidence 55555554443 2344555566666666666544 45666667777777777776
Q ss_pred CcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCccee
Q 046544 343 GSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEG 391 (646)
Q Consensus 343 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 391 (646)
+..| +..+++|+.|++++|++++ +| .+..+++|+.|++++|+++.
T Consensus 170 ~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 170 DIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred cchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 5444 6666777777777777764 33 36667777777777777664
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.85 E-value=1.5e-21 Score=215.73 Aligned_cols=173 Identities=25% Similarity=0.379 Sum_probs=91.5
Q ss_pred CCCCCEEEccCCcccccCCccccCCCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCC
Q 046544 58 LPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKS 137 (646)
Q Consensus 58 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~ 137 (646)
+++|+.|+|++|.|+.. + .+..+++|+.|+|++|+|+++.| |..+++|++|+|++|.|+.++ .+..+++
T Consensus 42 L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-------~l~~l~~ 110 (605)
T 1m9s_A 42 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDLS-------SLKDLKK 110 (605)
T ss_dssp HTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCT-------TSTTCTT
T ss_pred CCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCCh-------hhccCCC
Confidence 44444455555544422 2 24445555555555555554433 555555555555555554432 2445555
Q ss_pred CCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEe
Q 046544 138 LTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGL 217 (646)
Q Consensus 138 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 217 (646)
|++|+|++|++.++.. +..+ ++|+.|+|++|.+++. ..+..+++|+.|+|++|++.+..| +..+++|+.|+|
T Consensus 111 L~~L~Ls~N~l~~l~~---l~~l-~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 182 (605)
T 1m9s_A 111 LKSLSLEHNGISDING---LVHL-PQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL 182 (605)
T ss_dssp CCEEECTTSCCCCCGG---GGGC-TTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCEEEecCCCCCCCcc---ccCC-CccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEEC
Confidence 5555555555544311 1111 2333344444444332 345666677777777777765555 666677777777
Q ss_pred ecccccCcCchhhcCCCCCcEEEecCCcccccCC
Q 046544 218 DDNKLEGSIPDSICRLTELYELELGGNKLFGSIP 251 (646)
Q Consensus 218 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 251 (646)
++|+|++. ..+..+++|+.|+|++|++.+...
T Consensus 183 s~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 183 SKNHISDL--RALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp CSSCCCBC--GGGTTCTTCSEEECCSEEEECCCC
T ss_pred cCCCCCCC--hHHccCCCCCEEEccCCcCcCCcc
Confidence 77776643 346666777777777777664433
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.84 E-value=4.1e-21 Score=193.70 Aligned_cols=189 Identities=25% Similarity=0.366 Sum_probs=139.9
Q ss_pred CCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEe
Q 046544 138 LTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGL 217 (646)
Q Consensus 138 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 217 (646)
+..+.+..+.+.++..... .++|+.|++++|.+... +.+..+++|++|++++|++++..+ +.++++|++|++
T Consensus 26 ~~~~~l~~~~~~~~~~~~~----l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l 97 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVTQNE----LNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFL 97 (291)
T ss_dssp HHHHHTTCSCTTSEECHHH----HHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred HHHHHhcCCCcccccchhh----cCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEEC
Confidence 3444566666665433322 25799999999999875 348999999999999999998766 999999999999
Q ss_pred ecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCC
Q 046544 218 DDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPL 297 (646)
Q Consensus 218 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~ 297 (646)
++|++++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|.++.++ .+..+++|+.|++
T Consensus 98 ~~n~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~L--------- 163 (291)
T 1h6t_A 98 DENKVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDIT-VLSRLTKLDTLSL--------- 163 (291)
T ss_dssp CSSCCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEEC---------
T ss_pred CCCcCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcch-hhccCCCCCEEEc---------
Confidence 99999863 3499999999999999999864 46888999999999999988763 4444555555554
Q ss_pred CCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcc
Q 046544 298 PLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSG 367 (646)
Q Consensus 298 ~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 367 (646)
++|.+++..| +..+++|+.|++++|++++. | .+..+++|+.|++++|+++.
T Consensus 164 ---------------~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 164 ---------------EDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp ---------------CSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred ---------------cCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 4454444433 56666666666666666643 2 36667777777777777663
No 361
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=1.6e-20 Score=182.36 Aligned_cols=154 Identities=24% Similarity=0.310 Sum_probs=77.2
Q ss_pred cEEEecCCcccccCCccccCCCCCceeecCCCccccc-ccccccccccccccCCCCcccCCCCCccCccccceEEEcccc
Q 046544 237 YELELGGNKLFGSIPACFSNLASLRILSLSSNELTSI-PLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMN 315 (646)
Q Consensus 237 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l-p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N 315 (646)
+.++.+++++.. +|..+. ++|++|+|++|.++.+ |..|..+++|+.|++++|.++...+..|..+++|+.|+|++|
T Consensus 22 ~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 445555555542 222221 4555555555555544 333445555555555555554444444455555555555555
Q ss_pred cccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeecc
Q 046544 316 NFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIP 394 (646)
Q Consensus 316 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 394 (646)
.++++.+..|..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|++++|+++|.++
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 555444444555555555555555555 344445555555555555555554444445555555555555555554433
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.84 E-value=9.7e-21 Score=209.14 Aligned_cols=172 Identities=24% Similarity=0.323 Sum_probs=91.3
Q ss_pred ccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCce
Q 046544 183 TNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRI 262 (646)
Q Consensus 183 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 262 (646)
..+++|+.|++++|.+.... .+..+++|+.|+|++|+|.+..| +..+++|+.|+|++|.+.+. + .+..+++|+.
T Consensus 40 ~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~-~l~~l~~L~~ 113 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL-S-SLKDLKKLKS 113 (605)
T ss_dssp HHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC-T-TSTTCTTCCE
T ss_pred hcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC-h-hhccCCCCCE
Confidence 34455555555555554321 34555555555555555554333 55555555555555555432 1 4555555555
Q ss_pred eecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCC
Q 046544 263 LSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLE 342 (646)
Q Consensus 263 L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 342 (646)
|+|++|.|+.+| .+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++..| +..+++|+.|+|++|+|+
T Consensus 114 L~Ls~N~l~~l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 114 LSLEHNGISDIN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp EECTTSCCCCCG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred EEecCCCCCCCc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCC
Confidence 555555555543 344555555555555555543 345555555555555555555444 555566666666666665
Q ss_pred CcccccccCCCCCCEEEccCCcCcc
Q 046544 343 GSIPDSFGDLISLKFLNLSNNNLSG 367 (646)
Q Consensus 343 ~~~p~~~~~l~~L~~L~Ls~N~l~~ 367 (646)
+. +.+..+++|+.|+|++|++++
T Consensus 189 ~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 189 DL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp BC--GGGTTCTTCSEEECCSEEEEC
T ss_pred CC--hHHccCCCCCEEEccCCcCcC
Confidence 43 235555666666666665554
No 363
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=1.2e-20 Score=196.46 Aligned_cols=160 Identities=26% Similarity=0.227 Sum_probs=108.5
Q ss_pred cCcEEEeecccccccCCcccc-cCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEe
Q 046544 163 SLKDFYMSNCNVSGGIPEEIT-NLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELEL 241 (646)
Q Consensus 163 ~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 241 (646)
.++.|+|++|+|++..+..+. .+++|+.|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 119 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEEC
Confidence 345555555555555566666 7777888888888887777777777888888888888887776777777888888888
Q ss_pred cCCcccccCCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccC
Q 046544 242 GGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVI 321 (646)
Q Consensus 242 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~ 321 (646)
++|+|.++.+..|.++++|+.|+|++|.|+.+|..++. .+..+++|+.|+|++|+|+++.
T Consensus 120 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~--------------------~~~~l~~L~~L~L~~N~l~~l~ 179 (361)
T 2xot_A 120 YNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIK--------------------DGNKLPKLMLLDLSSNKLKKLP 179 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC------------------------CTTCCEEECCSSCCCCCC
T ss_pred CCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhc--------------------CcccCCcCCEEECCCCCCCccC
Confidence 88888777777777777888888888877777654321 0133455555555555555555
Q ss_pred ccccCCCCC--CCEEEccCccCC
Q 046544 322 PTEIGGLKN--LEYLFLGYNRLE 342 (646)
Q Consensus 322 ~~~~~~l~~--L~~L~Ls~N~l~ 342 (646)
+..|..++. |+.|+|++|++.
T Consensus 180 ~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 180 LTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp HHHHHHSCHHHHTTEECCSSCEE
T ss_pred HHHhhhccHhhcceEEecCCCcc
Confidence 555555555 367777777765
No 364
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=1e-19 Score=176.66 Aligned_cols=155 Identities=23% Similarity=0.248 Sum_probs=94.5
Q ss_pred CceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCc
Q 046544 260 LRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYN 339 (646)
Q Consensus 260 L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 339 (646)
.+.++.+++.++.+|..+. ++|+.|++++|.+++..|..|..+++|+.|+|++|.++++.+..|..+++|++|+|++|
T Consensus 21 ~~~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEeEccCCCcCccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 4556666666666665443 55666666666666655666666666666666666666555555666666666666666
Q ss_pred cCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccCC-CCCCCCccccccCCccccCCC
Q 046544 340 RLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRG-GSFGNFAAESFEGNELLCGSP 417 (646)
Q Consensus 340 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~~~~~~~~~~~N~~~c~~~ 417 (646)
++++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++++.++.. ..+..++.+++.+|+|.|+|+
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 666555555666666666666666666 45556666666666666666666544332 335556666666666666554
No 365
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.82 E-value=1.7e-20 Score=176.94 Aligned_cols=155 Identities=25% Similarity=0.331 Sum_probs=103.6
Q ss_pred ceeecCCCcccccccccccccccccccCCCCcccCCCCC-ccCccccceEEEcccccccccCccccCCCCCCCEEEccCc
Q 046544 261 RILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPL-EIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYN 339 (646)
Q Consensus 261 ~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 339 (646)
+++++++|.++++|..+.. +++.|++++|.+++..+. .|..+++|+.|++++|.++++.|..|+++++|++|+|++|
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 4566666666666654433 566666666666654443 3667777777777777777777777777777777777777
Q ss_pred cCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccCCCCCCCCccccccCCccccCCC
Q 046544 340 RLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFAAESFEGNELLCGSP 417 (646)
Q Consensus 340 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~ 417 (646)
++++..+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+++|.++.......+....+.++...|..|
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 777777777777777777777777777777777777777777777777777766543222223333445555566544
No 366
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.82 E-value=1.2e-20 Score=200.09 Aligned_cols=147 Identities=19% Similarity=0.200 Sum_probs=112.5
Q ss_pred CCCCcceeecccccceEEEEEeC-CCcEEEEEEEeccCC---chHHHHHHHHHHHHhCCC-CCce---------------
Q 046544 492 NGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG---RAFKSFAVECEMMKSIRH-RNLI--------------- 551 (646)
Q Consensus 492 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~H-~niv--------------- 551 (646)
..|...+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+.+++.++| +++.
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 45777899999999999999954 799999999874332 235678899999999987 2211
Q ss_pred ------eEEEEEec-----CCeeEEEEEecCCCCHHHHHh------hCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeE
Q 046544 552 ------KVISSCSN-----EEFKALVLEYKPHGSLEKYLY------SSNCILDIFQRLNIMIDVASALEYLHFGCLAPVI 614 (646)
Q Consensus 552 ------~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ii 614 (646)
.+..++.. ....+++|+++ +++|.+++. ..+..+++..+..++.|+++||+||| +++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 11111111 12356777765 679999884 22345677788999999999999999 88999
Q ss_pred ecCCCCCCEEEcCCCcEEEEeecCcccc
Q 046544 615 HCDLKPDNVLLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 615 Hrdlk~~Nil~~~~~~~ki~DfGla~~~ 642 (646)
||||||+|||++.++.+||+|||+|+..
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~ 261 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRD 261 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEET
T ss_pred cCCcccceEEEecCCeEEEEeccceeec
Confidence 9999999999999999999999998864
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.81 E-value=6e-21 Score=189.39 Aligned_cols=170 Identities=24% Similarity=0.337 Sum_probs=100.8
Q ss_pred CCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceee
Q 046544 185 LTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILS 264 (646)
Q Consensus 185 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 264 (646)
+.++..+++++|.+++.. .+..+++|++|++++|.++. +| .+..+++|++|+|++|+|++..+ +.++++|+.|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 344455556666665443 35556666666666666653 33 45666666666666666654443 66666666666
Q ss_pred cCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCc
Q 046544 265 LSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGS 344 (646)
Q Consensus 265 L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 344 (646)
+++|+++.+|.... ++|+.|++++|.+++. ..++.+++|+.|++++|++++.
T Consensus 92 L~~N~l~~l~~~~~--------------------------~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~ 143 (263)
T 1xeu_A 92 VNRNRLKNLNGIPS--------------------------ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI 143 (263)
T ss_dssp CCSSCCSCCTTCCC--------------------------SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC
T ss_pred CCCCccCCcCcccc--------------------------CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC
Confidence 66666665543111 4455555555555543 2466666666666666666643
Q ss_pred ccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceee
Q 046544 345 IPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGE 392 (646)
Q Consensus 345 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 392 (646)
+ .+..+++|+.|+|++|++++. ..+..+++|+.|++++|++++.
T Consensus 144 -~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 144 -V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 2 466666677777777766644 4566667777777777776654
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.81 E-value=2e-20 Score=185.57 Aligned_cols=170 Identities=22% Similarity=0.299 Sum_probs=84.8
Q ss_pred CCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEcccCccccccCccccCcCCCCEE
Q 046544 33 MSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWL 112 (646)
Q Consensus 33 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 112 (646)
+.+++.+++++|.+++.. .. ..+++|++|++++|.++. ++ .+..+++|++|+|++|+|+++.+ |.++++|++|
T Consensus 18 l~~l~~l~l~~~~i~~~~-~~--~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV-SQ--KELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE-CH--HHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHhcCCCccccc-ch--hhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 344455555555554322 11 124455555555555542 22 34444555555555555554333 4445555555
Q ss_pred EccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEE
Q 046544 113 NLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITID 192 (646)
Q Consensus 113 ~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 192 (646)
+|++|+++.+++ +.. ++|++|+++ +|++++. +.+..+++|+.|+
T Consensus 91 ~L~~N~l~~l~~-------~~~-~~L~~L~L~--------------------------~N~l~~~--~~l~~l~~L~~L~ 134 (263)
T 1xeu_A 91 SVNRNRLKNLNG-------IPS-ACLSRLFLD--------------------------NNELRDT--DSLIHLKNLEILS 134 (263)
T ss_dssp ECCSSCCSCCTT-------CCC-SSCCEEECC--------------------------SSCCSBS--GGGTTCTTCCEEE
T ss_pred ECCCCccCCcCc-------ccc-CcccEEEcc--------------------------CCccCCC--hhhcCcccccEEE
Confidence 555555444321 111 334444443 3333332 2355666666666
Q ss_pred ccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCccccc
Q 046544 193 LGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGS 249 (646)
Q Consensus 193 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 249 (646)
+++|++++.. .+..+++|++|++++|++++. ..+..+++|+.|++++|++...
T Consensus 135 Ls~N~i~~~~--~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 135 IRNNKLKSIV--MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCBCG--GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCCCCh--HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 6666666542 455666666666666666644 4555666666666666666543
No 369
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=1.3e-22 Score=222.89 Aligned_cols=191 Identities=23% Similarity=0.211 Sum_probs=111.3
Q ss_pred ccCCCCCEEEccCCccccccCccccCCCCCCeEEeeccc-------------ccCcCchhhcCCCCCcEEE-ecCCcccc
Q 046544 183 TNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNK-------------LEGSIPDSICRLTELYELE-LGGNKLFG 248 (646)
Q Consensus 183 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~~~l~~L~~L~-L~~N~i~~ 248 (646)
..+++|+.|+|++|+++ .+|..++.+++|+.|++++|. +.+..|..+..+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 34556666666666665 445556666666666665543 3445666666666676666 5555432
Q ss_pred cCCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCC
Q 046544 249 SIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGL 328 (646)
Q Consensus 249 ~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 328 (646)
+|+.+.+++|.++.+|. ..|+.|++++|.+++ +|. ++.+++|+.|+|++|.++ .+|..|+.+
T Consensus 424 ----------~L~~l~l~~n~i~~l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 485 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAAL 485 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGC
T ss_pred ----------hhhhhhhhcccccccCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcC
Confidence 23344444444444432 135556666666654 343 666666666666666666 345566666
Q ss_pred CCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccC-CccccCCCCCCceeCcCCcceeeccC
Q 046544 329 KNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAI-PTSLEKLSYLEDLNLSFNKLEGEIPR 395 (646)
Q Consensus 329 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~ 395 (646)
++|+.|+|++|+|++ +| .|+.+++|+.|+|++|+|++.. |..+..+++|+.|+|++|++++.+|.
T Consensus 486 ~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 486 RCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp TTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 666666666666664 34 5666666666666666666554 66666666666666666666655443
No 370
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.80 E-value=3.8e-20 Score=190.31 Aligned_cols=103 Identities=12% Similarity=0.075 Sum_probs=72.8
Q ss_pred ccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCC-EEEccCccCCCcccccccCCCCCCEE
Q 046544 280 LKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLE-YLFLGYNRLEGSIPDSFGDLISLKFL 358 (646)
Q Consensus 280 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L 358 (646)
+++|+.+++++|.++.+.+.+|.++++|+.+++++| ++.+.+.+|.++++|+ .+++.+ .++.+.+.+|.++++|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 456666666666666555666777777777777766 6666677777777777 777777 6665666777777777777
Q ss_pred EccCCcCcccCCccccCCCCCCceeC
Q 046544 359 NLSNNNLSGAIPTSLEKLSYLEDLNL 384 (646)
Q Consensus 359 ~Ls~N~l~~~~p~~~~~l~~L~~L~L 384 (646)
++++|+++...+.+|.++++|+.++.
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EeCCCccCccchhhhcCCcchhhhcc
Confidence 77777777666677777777777653
No 371
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.80 E-value=1.3e-20 Score=213.36 Aligned_cols=161 Identities=21% Similarity=0.219 Sum_probs=100.3
Q ss_pred eecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccc
Q 046544 169 MSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFG 248 (646)
Q Consensus 169 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~ 248 (646)
+..|.+. ..|+.+..+++|+.|+|++|++. .+|..+.++++|++|+|++|.|+ .+|..|+.+++|++|+|++|+|+
T Consensus 208 ~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 208 DIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 3444444 45677777778888888888877 44555557777888888888877 66777777888888888888877
Q ss_pred cCCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCcccc-ceEEEcccccccccCccccCC
Q 046544 249 SIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKV-LIGIDFSMNNFSSVIPTEIGG 327 (646)
Q Consensus 249 ~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~-L~~L~ls~N~l~~~~~~~~~~ 327 (646)
.+|..|+++++|++|+|++|.|+.+|..|..+++|+.|+|++|.+++.+|..+..+.. +..+++++|.+++..|..
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~--- 360 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE--- 360 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---
T ss_pred ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc---
Confidence 5577777778888888888888777777777777777777777777776666655422 233667777777666543
Q ss_pred CCCCCEEEccCc
Q 046544 328 LKNLEYLFLGYN 339 (646)
Q Consensus 328 l~~L~~L~Ls~N 339 (646)
|+.|++++|
T Consensus 361 ---l~~l~l~~n 369 (727)
T 4b8c_D 361 ---RRFIEINTD 369 (727)
T ss_dssp ------------
T ss_pred ---cceeEeecc
Confidence 445555555
No 372
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=1.9e-21 Score=213.58 Aligned_cols=189 Identities=19% Similarity=0.177 Sum_probs=154.9
Q ss_pred cCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCc-------------ccccCCccccCCCCCceee-cCCCcccc
Q 046544 207 SKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNK-------------LFGSIPACFSNLASLRILS-LSSNELTS 272 (646)
Q Consensus 207 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-------------i~~~~~~~~~~l~~L~~L~-L~~N~l~~ 272 (646)
...++|+.|+|++|+++ .+|..++.+++|+.|++++|. +.+..|..++++++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 55788999999999998 778999999999999997775 4456666777777777777 666644
Q ss_pred cccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCC
Q 046544 273 IPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDL 352 (646)
Q Consensus 273 lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 352 (646)
..|..+.+++|.++...+ ..|+.|++++|.++++ |. |+.+++|+.|+|++|+|+ .+|..|+.+
T Consensus 423 --------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~l-p~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 485 (567)
T 1dce_A 423 --------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVL-CH-LEQLLLVTHLDLSHNRLR-ALPPALAAL 485 (567)
T ss_dssp --------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSC-CC-GGGGTTCCEEECCSSCCC-CCCGGGGGC
T ss_pred --------chhhhhhhhcccccccCc------cCceEEEecCCCCCCC-cC-ccccccCcEeecCccccc-ccchhhhcC
Confidence 344556666777664322 2488999999999974 55 999999999999999999 788999999
Q ss_pred CCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeec-cC-CCCCCCCccccccCCccccCCC
Q 046544 353 ISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEI-PR-GGSFGNFAAESFEGNELLCGSP 417 (646)
Q Consensus 353 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~-~~~~~~~~~~~~~~N~~~c~~~ 417 (646)
++|+.|+|++|+|++ +| .+..+++|+.|+|++|++++.+ |. ...++.++.+++++|++...++
T Consensus 486 ~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 486 RCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp TTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 999999999999996 67 8999999999999999999984 54 4668999999999999765444
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.79 E-value=1.5e-19 Score=171.22 Aligned_cols=154 Identities=19% Similarity=0.255 Sum_probs=97.9
Q ss_pred cCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccccccccccccccc
Q 046544 207 SKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQL 286 (646)
Q Consensus 207 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L 286 (646)
..+++|++|++++|.++ .+| .+..+++|++|++++|.+.. +..+..+++|++|++++|.++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~--------------- 101 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVT--------------- 101 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCB---------------
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccC---------------
Confidence 44556666666666666 333 45566666666666665432 224555555555555555544
Q ss_pred cCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCcc-CCCcccccccCCCCCCEEEccCCcC
Q 046544 287 NFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNR-LEGSIPDSFGDLISLKFLNLSNNNL 365 (646)
Q Consensus 287 ~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l 365 (646)
+..+..+..+++|+.|++++|.+++..|..++.+++|++|++++|+ ++. +| .+..+++|+.|++++|++
T Consensus 102 --------~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i 171 (197)
T 4ezg_A 102 --------SDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGV 171 (197)
T ss_dssp --------GGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCC
T ss_pred --------cccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCC
Confidence 3444556666777777777777776667777778888888888887 653 44 577788888888888888
Q ss_pred cccCCccccCCCCCCceeCcCCccee
Q 046544 366 SGAIPTSLEKLSYLEDLNLSFNKLEG 391 (646)
Q Consensus 366 ~~~~p~~~~~l~~L~~L~L~~N~l~~ 391 (646)
++ ++ .+..+++|+.|++++|++.+
T Consensus 172 ~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 172 HD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CC-CT-TGGGCSSCCEEEECBC----
T ss_pred cC-hH-HhccCCCCCEEEeeCcccCC
Confidence 74 33 67778888888888887754
No 374
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=5.3e-20 Score=182.00 Aligned_cols=140 Identities=21% Similarity=0.239 Sum_probs=107.6
Q ss_pred CCCcceeecccccceEEEEEe-CCCcE--EEEEEEeccCCc------------------------hHHHHHHHHHHHHhC
Q 046544 493 GFSENNLIGRGGFGSVYKARL-GDGME--VAVKVFNLQCGR------------------------AFKSFAVECEMMKSI 545 (646)
Q Consensus 493 ~~~~~~~lg~G~~g~V~~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l 545 (646)
-|+..+.||+|+||.||+|+. .+|+. ||||+++..... ....+.+|+.+++.+
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 366789999999999999997 68988 999987543111 013578899999999
Q ss_pred CCCCc--eeEEEEEecCCeeEEEEEecCC-C----CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCC
Q 046544 546 RHRNL--IKVISSCSNEEFKALVLEYKPH-G----SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDL 618 (646)
Q Consensus 546 ~H~ni--v~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdl 618 (646)
+|+++ +.++++ +..++||||+.+ | +|.++... .++..+..++.|++.|+.|+|. ..+|+||||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDl 197 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADL 197 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCC
Confidence 88754 344432 356899999942 3 67776533 1234567899999999999993 358999999
Q ss_pred CCCCEEEcCCCcEEEEeecCcccccC
Q 046544 619 KPDNVLLDDNLVAYLSDFGIAKLLIG 644 (646)
Q Consensus 619 k~~Nil~~~~~~~ki~DfGla~~~~~ 644 (646)
||+|||+++ .++|+|||+|.....
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~~~ 221 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTLRH 221 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEETTS
T ss_pred CHHHEEEcC--cEEEEECcccccCCC
Confidence 999999998 899999999987643
No 375
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.79 E-value=1.7e-20 Score=212.33 Aligned_cols=190 Identities=26% Similarity=0.279 Sum_probs=92.0
Q ss_pred EEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcc
Q 046544 191 IDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNEL 270 (646)
Q Consensus 191 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 270 (646)
++++.|++. .++..|..++.|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|+++++|++|+|++|.|
T Consensus 206 ~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l 282 (727)
T 4b8c_D 206 DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL 282 (727)
T ss_dssp -----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCC
T ss_pred cccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcC
Confidence 345555555 55666777777777777777776 45555556777777777777776 5566677777777777777777
Q ss_pred cccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCC-CCEEEccCccCCCcccccc
Q 046544 271 TSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKN-LEYLFLGYNRLEGSIPDSF 349 (646)
Q Consensus 271 ~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~p~~~ 349 (646)
+.+|..|..+++|++|+|++|.++ .+|..|+.+++|+.|+|++|.+++.+|..+..+.. +..++|++|.+++.+|..
T Consensus 283 ~~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~- 360 (727)
T 4b8c_D 283 TSLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE- 360 (727)
T ss_dssp SSCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-
T ss_pred CccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc-
Confidence 777766767777777777777665 45555666666666777766666666655543321 123566666666655543
Q ss_pred cCCCCCCEEEccCC--------cCcccCCccccCCCCCCceeCcCCcce
Q 046544 350 GDLISLKFLNLSNN--------NLSGAIPTSLEKLSYLEDLNLSFNKLE 390 (646)
Q Consensus 350 ~~l~~L~~L~Ls~N--------~l~~~~p~~~~~l~~L~~L~L~~N~l~ 390 (646)
|+.|+++.| .+.+..+..+..+..++...++.|-+.
T Consensus 361 -----l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 361 -----RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp ----------------------------------------------CCC
T ss_pred -----cceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 344555555 233333334444455555555555554
No 376
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.79 E-value=2.5e-19 Score=184.11 Aligned_cols=264 Identities=16% Similarity=0.133 Sum_probs=143.7
Q ss_pred CCCCCEEECCCCcccccCCcCccC-CCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccC------
Q 046544 9 LQNLEELDLRHNKLVGTVPAAIFN-MSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFN------ 81 (646)
Q Consensus 9 l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------ 81 (646)
+.++++|.++++ +....-..+.. +++|++|||++|+|...... ...++.+..+.+..|. ..+..|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~--~~~~~~~~~~~~~~~~---I~~~aF~~~~~~~~ 97 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGK--AGTYPNGKFYIYMANF---VPAYAFSNVVNGVT 97 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEES--SSSSGGGCCEEECTTE---ECTTTTEEEETTEE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCc--cccccccccccccccc---cCHHHhcccccccc
Confidence 567888888875 22222223333 78899999999998721111 1113335566666663 44566667
Q ss_pred --CCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCC----CCCcCCcc
Q 046544 82 --ASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNP----LDGILSKT 155 (646)
Q Consensus 82 --l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~----l~~~~~~~ 155 (646)
+++|+.|+|.+ .++.+.+.+|.++++|+.|++++|.++.+++. +|.++.++..+.+..+. ...+....
T Consensus 98 ~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~-----aF~~~~~l~~l~~~~~~~~~~~~~i~~~~ 171 (329)
T 3sb4_A 98 KGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPE-----ALADSVTAIFIPLGSSDAYRFKNRWEHFA 171 (329)
T ss_dssp EECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTT-----SSCTTTCEEEECTTCTHHHHTSTTTTTSC
T ss_pred cccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchh-----hhcCCCceEEecCcchhhhhccccccccc
Confidence 88888888888 88888888888888888888888888877654 47777777777766532 11111111
Q ss_pred hhcc------------------------ccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCC
Q 046544 156 SIGN------------------------LSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQK 211 (646)
Q Consensus 156 ~~~~------------------------~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 211 (646)
+... ...++..+.+.++-...........+++|+.++|++|+++.+.+.+|.++.+
T Consensus 172 f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~ 251 (329)
T 3sb4_A 172 FIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKY 251 (329)
T ss_dssp EEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTT
T ss_pred cccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCC
Confidence 1110 0112223333222111000000112455555555555555555555555555
Q ss_pred CCeEEeecccccCcCchhhcCCCCCc-EEEecCCcccccCCccccCCCCCceeecCCCccccccc-ccccccccccc
Q 046544 212 LQGLGLDDNKLEGSIPDSICRLTELY-ELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPL-TFWNLKDILQL 286 (646)
Q Consensus 212 L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L 286 (646)
|+.++|.+| ++.+.+.+|.++++|+ .+++.+ .++.+.+.+|.++++|+.+++++|.++.++. .|.++++|+.+
T Consensus 252 L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 252 LLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp CCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred CCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhh
Confidence 555555555 4444555555555555 555555 4444445555555555555555555555543 34444444443
No 377
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=1.2e-18 Score=164.84 Aligned_cols=150 Identities=16% Similarity=0.224 Sum_probs=69.1
Q ss_pred CCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceee
Q 046544 185 LTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILS 264 (646)
Q Consensus 185 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 264 (646)
+++|+.|++++|.+... | .+..+++|++|++++|.++. +..+..+++|++|++++|++++..+..|+.+++|++|+
T Consensus 43 l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVTDL-T-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCSCC-T-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCccCh-H-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 33444444444444421 2 24444444444444443331 12344444444444444444444444444444444444
Q ss_pred cCCCcccc-cccccccccccccccCCCCc-ccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCC
Q 046544 265 LSSNELTS-IPLTFWNLKDILQLNFSSNF-LTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLE 342 (646)
Q Consensus 265 L~~N~l~~-lp~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 342 (646)
+++|.++. .|..+..+++|+.|++++|. ++ .+| .+..+++|+.|++++|.+++.. .+..+++|+.|++++|++.
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC---
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcccC
Confidence 44444442 23344444444444444444 33 222 3455555555555555555432 4556666666666666654
No 378
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.77 E-value=8.1e-19 Score=165.33 Aligned_cols=175 Identities=23% Similarity=0.290 Sum_probs=122.0
Q ss_pred cEEEecCCcccccCCccccCCCCCceeecCCCcccccccc--cccccccccccCCCCcccCCCCCccCccccceEEEccc
Q 046544 237 YELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLT--FWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSM 314 (646)
Q Consensus 237 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~--~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~ 314 (646)
+++++++|+++ .+|..+. .+|++|++++|.++.++.. |..+++|+.|++++|.+++..|..|.++++|+.|++++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45666666664 3333332 2666777777777666542 66677777777777777777777888888888888888
Q ss_pred ccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCc-cccCCCCCCceeCcCCcceeec
Q 046544 315 NNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPT-SLEKLSYLEDLNLSFNKLEGEI 393 (646)
Q Consensus 315 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~ 393 (646)
|+++++.+..|+++++|++|+|++|++++..|..|..+++|+.|+|++|.+++..+. ++. ..++...+..+...+..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~--~~l~~~~~~~~~~~C~~ 165 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFA--EWLRKKSLNGGAARCGA 165 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHH--HHHHHHCCSGGGCBBCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHH--HHHHHcCCCCCCCCCCC
Confidence 888888888888899999999999999988888899999999999999998865442 111 11233345555555555
Q ss_pred cCCCCCCCCccccccCCccccCCCC
Q 046544 394 PRGGSFGNFAAESFEGNELLCGSPT 418 (646)
Q Consensus 394 p~~~~~~~~~~~~~~~N~~~c~~~~ 418 (646)
|.. +......++..+.+.|..+.
T Consensus 166 P~~--l~~~~l~~l~~~~~~C~~~~ 188 (192)
T 1w8a_A 166 PSK--VRDVQIKDLPHSEFKCSSEN 188 (192)
T ss_dssp STT--TTTSBGGGSCTTTCCCCCC-
T ss_pred ChH--HcCCChhhCcHhhcCcCCCC
Confidence 543 44455556777888886543
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.77 E-value=5.4e-19 Score=166.51 Aligned_cols=131 Identities=30% Similarity=0.408 Sum_probs=102.8
Q ss_pred ceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCcc
Q 046544 261 RILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNR 340 (646)
Q Consensus 261 ~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 340 (646)
+++++++|.++++|..+. ++|+.|++++|.++ .+|..|..+++|+.|++++|.++++.+..|.++++|++|+|++|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 456677777777765543 46677777777776 455677777788888888888887777888888888888888888
Q ss_pred CCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeecc
Q 046544 341 LEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIP 394 (646)
Q Consensus 341 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 394 (646)
|++..|..|..+++|+.|+|++|+|+...+..|..+++|+.|+|++|++.+.+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 888888888888888888888888887666778888888888888888887655
No 380
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.76 E-value=2.5e-17 Score=173.06 Aligned_cols=265 Identities=9% Similarity=0.095 Sum_probs=157.7
Q ss_pred CCCCEEEccCCcccccCCccccCCCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCC
Q 046544 59 PNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSL 138 (646)
Q Consensus 59 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L 138 (646)
..++.+.+.+ .++.+...+|.+. +|+.+++..| ++.+...+|.+. +|+.+.+.+ .++.+.. .+|.+|++|
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~-----~aF~~c~~L 182 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKE-----DIFYYCYNL 182 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECS-----STTTTCTTC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehH-----HHhhCcccC
Confidence 4566666654 3554566666664 6777777666 666777777773 577777765 5555543 247777777
Q ss_pred CEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEee
Q 046544 139 TFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLD 218 (646)
Q Consensus 139 ~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 218 (646)
+.+++++|.++.++...+. ..+|+.+.+.++ +..+...+|.++++|+.+++..| ++.+...+|.+ .+|+.+.+.
T Consensus 183 ~~l~l~~n~l~~I~~~aF~---~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp 256 (401)
T 4fdw_A 183 KKADLSKTKITKLPASTFV---YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP 256 (401)
T ss_dssp CEEECTTSCCSEECTTTTT---TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE
T ss_pred CeeecCCCcceEechhhEe---ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC
Confidence 7777777777666544332 134555555422 44444555555555555555543 34344445554 455555552
Q ss_pred cccccCcCchhhcCCCCCcEEEecCCccc-----ccCCccccCCCCCceeecCCCcccccccccccccccccccCCCCcc
Q 046544 219 DNKLEGSIPDSICRLTELYELELGGNKLF-----GSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFL 293 (646)
Q Consensus 219 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-----~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l 293 (646)
+.++.+.+.+|.++++|+.+++.+|.+. .+.+.+| .++++|+.+++.+ .+
T Consensus 257 -~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF-----------------------~~c~~L~~l~l~~-~i 311 (401)
T 4fdw_A 257 -NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCL-----------------------EGCPKLARFEIPE-SI 311 (401)
T ss_dssp -TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTT-----------------------TTCTTCCEECCCT-TC
T ss_pred -CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHh-----------------------hCCccCCeEEeCC-ce
Confidence 3334344455555555555555544443 2333444 4455555555552 24
Q ss_pred cCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCC-CCCEEEccCCcCc
Q 046544 294 TGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLI-SLKFLNLSNNNLS 366 (646)
Q Consensus 294 ~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~ 366 (646)
+.+...+|.++++|+.+++..| ++.+.+.+|.++ +|+.+++++|.+....+..|.+++ .++.|++..+.+.
T Consensus 312 ~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 312 RILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 4445566777777777777444 666777788888 888888888887767777787774 6778888777654
No 381
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.76 E-value=5e-17 Score=170.71 Aligned_cols=263 Identities=13% Similarity=0.147 Sum_probs=180.2
Q ss_pred CCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCCCcE
Q 046544 8 NLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKLSI 87 (646)
Q Consensus 8 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 87 (646)
....++.+.+-+ .++.+.+.+|.+. +|+.+.|..| ++. +...+|.. .+|+.+.+.. .++...+.+|.++++|+.
T Consensus 111 ~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~-I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~ 184 (401)
T 4fdw_A 111 ILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKS-IGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKK 184 (401)
T ss_dssp ECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCE-ECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCE
T ss_pred ecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccE-ECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCe
Confidence 346778888765 4777888899885 7999999877 654 45545544 4799999986 777788888999999999
Q ss_pred EEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEE
Q 046544 88 LELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDF 167 (646)
Q Consensus 88 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L 167 (646)
++|++|.++.+...+|. ..+|+.+.|..+ ++.++. .+|.+|++|+.+++..| ++.+....+.+ .+|+.+
T Consensus 185 l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~-----~aF~~~~~L~~l~l~~~-l~~I~~~aF~~---~~L~~i 253 (401)
T 4fdw_A 185 ADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGS-----QAFLKTSQLKTIEIPEN-VSTIGQEAFRE---SGITTV 253 (401)
T ss_dssp EECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECT-----TTTTTCTTCCCEECCTT-CCEECTTTTTT---CCCSEE
T ss_pred eecCCCcceEechhhEe-ecccCEEEeCCc-hheehh-----hHhhCCCCCCEEecCCC-ccCcccccccc---CCccEE
Confidence 99999999988888888 488999999854 776654 35888999999999875 55554444433 467777
Q ss_pred EeecccccccCCcccccCCCCCEEEccCCccc-----cccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEec
Q 046544 168 YMSNCNVSGGIPEEITNLTNSITIDLGGNKLN-----GSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELG 242 (646)
Q Consensus 168 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 242 (646)
.+ .+.++.+...+|.++++|+.+++.+|.+. .+.+.+|.++++|+.+++.+ .++.+...+|.++++|+.++|.
T Consensus 254 ~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp 331 (401)
T 4fdw_A 254 KL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIP 331 (401)
T ss_dssp EE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEEC
T ss_pred Ee-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEEC
Confidence 77 34566566667777777777777666654 45566666666777776663 3555666666666667766664
Q ss_pred CCcccccCCccccCCCCCceeecCCCccccccc-cccccc-ccccccCCCC
Q 046544 243 GNKLFGSIPACFSNLASLRILSLSSNELTSIPL-TFWNLK-DILQLNFSSN 291 (646)
Q Consensus 243 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~-~L~~L~l~~N 291 (646)
.| ++.+.+.+|.++ +|+.+++++|.+..++. .|.+++ ++..|++..+
T Consensus 332 ~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~ 380 (401)
T 4fdw_A 332 AN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAE 380 (401)
T ss_dssp TT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGG
T ss_pred cc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHH
Confidence 44 555566666666 66666666666665543 233332 3344444443
No 382
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.73 E-value=1.7e-17 Score=154.17 Aligned_cols=134 Identities=25% Similarity=0.277 Sum_probs=113.2
Q ss_pred CceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCc
Q 046544 260 LRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYN 339 (646)
Q Consensus 260 L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 339 (646)
.+.+++++|.++.+|..+. ++|+.|++++|.+++..+..|..+++|+.|++++|.++++.+..|+.+++|++|++++|
T Consensus 9 ~~~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TTEEECCSSCCSSCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEecCCCCccCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 4677778888887775543 57888888888888777777888899999999999998887788899999999999999
Q ss_pred cCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcceeeccC
Q 046544 340 RLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEGEIPR 395 (646)
Q Consensus 340 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 395 (646)
++++..+..|..+++|++|++++|++++..+..+..+++|++|++++|++++.+|.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 99988778889999999999999999977776778899999999999999987764
No 383
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.71 E-value=2.4e-17 Score=151.69 Aligned_cols=132 Identities=20% Similarity=0.130 Sum_probs=85.1
Q ss_pred CCCceeecCCCccc--ccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEE
Q 046544 258 ASLRILSLSSNELT--SIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLF 335 (646)
Q Consensus 258 ~~L~~L~L~~N~l~--~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ 335 (646)
++|+.|++++|.++ .+|..+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 34444555555444 4444444455555555555555443 4556666777777777777766666666677777777
Q ss_pred ccCccCCCccc-ccccCCCCCCEEEccCCcCcccCC---ccccCCCCCCceeCcCCccee
Q 046544 336 LGYNRLEGSIP-DSFGDLISLKFLNLSNNNLSGAIP---TSLEKLSYLEDLNLSFNKLEG 391 (646)
Q Consensus 336 Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~ 391 (646)
+++|++++..+ ..+..+++|+.|++++|++++..+ ..+..+++|++|++++|.+..
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 77777775432 677777778888888887775444 367777788888888777764
No 384
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.70 E-value=3.9e-17 Score=150.25 Aligned_cols=130 Identities=25% Similarity=0.297 Sum_probs=73.9
Q ss_pred cCcEEEeeccccc-ccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEe
Q 046544 163 SLKDFYMSNCNVS-GGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELEL 241 (646)
Q Consensus 163 ~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 241 (646)
+++.|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++|+|
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 4444555555544 34455556666666666666666544 55566666666666666666555555555666666666
Q ss_pred cCCcccccCC-ccccCCCCCceeecCCCccccccc----ccccccccccccCCCCccc
Q 046544 242 GGNKLFGSIP-ACFSNLASLRILSLSSNELTSIPL----TFWNLKDILQLNFSSNFLT 294 (646)
Q Consensus 242 ~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~lp~----~~~~l~~L~~L~l~~N~l~ 294 (646)
++|++++..+ ..+..+++|++|++++|.++.+|. .+..+++|+.|++++|.+.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 6666654322 455566666666666666665554 3444555555555555444
No 385
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.70 E-value=8.5e-17 Score=151.43 Aligned_cols=128 Identities=23% Similarity=0.296 Sum_probs=105.3
Q ss_pred cEEEecCCcccccCCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEccccc
Q 046544 237 YELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNN 316 (646)
Q Consensus 237 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~ 316 (646)
+.+++++|.++.+ |..+. ++|+.|++++|.|+.+|..|.++++|+.|++++|.+++..+..|.++++|+.|+|++|.
T Consensus 13 ~~l~~~~~~l~~i-p~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKVL-PKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSSC-CSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCcC-CCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4667777777633 33332 46778888888888787777778888888888888887777888899999999999999
Q ss_pred ccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcc
Q 046544 317 FSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSG 367 (646)
Q Consensus 317 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 367 (646)
++++.|..|.++++|++|+|++|+++...+..|..+++|+.|+|++|.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999888899999999999999999997777789999999999999999874
No 386
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.69 E-value=8.7e-16 Score=161.77 Aligned_cols=317 Identities=14% Similarity=0.076 Sum_probs=173.5
Q ss_pred ccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEcccCccccccCc
Q 046544 22 LVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPN 101 (646)
Q Consensus 22 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 101 (646)
++.+...+|.++++|+.+.|..+ ++. +...+|..+++|+.++|..+ ++.....+|.++.+|+.+.+..+ +..+...
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~-I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~ 134 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VRE-IGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVE 134 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCE-ECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccC-cchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecce
Confidence 45566677777777777777643 443 45555556677777777644 55456666777777777666544 4446666
Q ss_pred cccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcc
Q 046544 102 TFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEE 181 (646)
Q Consensus 102 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~ 181 (646)
+|.+...++....... ..+. ..+|.++++|+.+.+.++. .. +...+
T Consensus 135 aF~~~~~~~~~~~~~~--~~i~-----~~aF~~c~~L~~i~l~~~~-~~--------------------------I~~~~ 180 (394)
T 4fs7_A 135 AFKGCDFKEITIPEGV--TVIG-----DEAFATCESLEYVSLPDSM-ET--------------------------LHNGL 180 (394)
T ss_dssp TTTTCCCSEEECCTTC--CEEC-----TTTTTTCTTCCEEECCTTC-CE--------------------------ECTTT
T ss_pred eeecccccccccCccc--cccc-----hhhhcccCCCcEEecCCcc-ce--------------------------ecccc
Confidence 6666654433332222 1111 1246677777777665432 21 22344
Q ss_pred cccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCc
Q 046544 182 ITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLR 261 (646)
Q Consensus 182 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 261 (646)
|.++++|+.+++..| +..+...+|.++..|+.+.+..+... +.+.+....+|+.+.+..+ +..+....|.++.+|+
T Consensus 181 F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~ 256 (394)
T 4fs7_A 181 FSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLE 256 (394)
T ss_dssp TTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCC
T ss_pred ccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccce
Confidence 555555555555544 34344555555555555555544332 2222333345555555433 2334445555566666
Q ss_pred eeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccC
Q 046544 262 ILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRL 341 (646)
Q Consensus 262 ~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 341 (646)
.+.+..+..+--...|.....++.+....+.+ ....|..+.+|+.+.+..+ ++.+...+|.++.+|+.+++.++ +
T Consensus 257 ~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v 331 (394)
T 4fs7_A 257 SISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-V 331 (394)
T ss_dssp EEEECCTTCEECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-C
T ss_pred eEEcCCCcceeeccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-c
Confidence 66655543322223444555555555444432 2245556666666666543 55555566666666666666543 5
Q ss_pred CCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcC
Q 046544 342 EGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSF 386 (646)
Q Consensus 342 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 386 (646)
+.+...+|.++++|+.+++..| ++.....+|.++.+|+.+++..
T Consensus 332 ~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~ 375 (394)
T 4fs7_A 332 EEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPK 375 (394)
T ss_dssp CEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEG
T ss_pred cEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECC
Confidence 5455566666666666666655 5545556666666666666643
No 387
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.69 E-value=1.3e-17 Score=170.99 Aligned_cols=145 Identities=14% Similarity=0.145 Sum_probs=103.6
Q ss_pred HHHHHhCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccC--------------CchHH--------HHHHHHHHHH
Q 046544 486 ELCRATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--------------GRAFK--------SFAVECEMMK 543 (646)
Q Consensus 486 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--------------~~~~~--------~~~~e~~~l~ 543 (646)
.+.....-|.+.+.||+|+||.||+|...+|+.||||+++... ..... ...+|...+.
T Consensus 89 ~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~ 168 (397)
T 4gyi_A 89 THAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK 168 (397)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence 3334344589999999999999999998899999999875321 00011 1234666777
Q ss_pred hCCCCCceeEEEEEecCCeeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCE
Q 046544 544 SIRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNV 623 (646)
Q Consensus 544 ~l~H~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Ni 623 (646)
++.+.++.-..-+... ..++||||++|+++.++... + ....++.|++.++.|+| ..+||||||||.||
T Consensus 169 rL~~~gv~vp~p~~~~--~~~LVME~i~G~~L~~l~~~-----~--~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NI 236 (397)
T 4gyi_A 169 ALYEEGFPVPEPIAQS--RHTIVMSLVDALPMRQVSSV-----P--DPASLYADLIALILRLA---KHGLIHGDFNEFNI 236 (397)
T ss_dssp HHHHTTCSCCCEEEEE--TTEEEEECCSCEEGGGCCCC-----S--CHHHHHHHHHHHHHHHH---HTTEECSCCSTTSE
T ss_pred HHHhcCCCCCeeeecc--CceEEEEecCCccHhhhccc-----H--HHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHE
Confidence 7755544322111111 24799999999888765321 1 24568899999999999 88999999999999
Q ss_pred EEcCCC----------cEEEEeecCcccc
Q 046544 624 LLDDNL----------VAYLSDFGIAKLL 642 (646)
Q Consensus 624 l~~~~~----------~~ki~DfGla~~~ 642 (646)
|+++++ .+.|+||+-|...
T Consensus 237 Ll~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 237 LIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred EEeCCCCcccccccccceEEEEeCCcccC
Confidence 998766 4899999976543
No 388
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.68 E-value=1.8e-15 Score=159.27 Aligned_cols=328 Identities=14% Similarity=0.116 Sum_probs=215.2
Q ss_pred cccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCC
Q 046544 5 EISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASK 84 (646)
Q Consensus 5 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 84 (646)
+|.++.+|+++.|.. .++.+...+|.++++|+.++|..+ ++. +...++..+.+|+.+.+..+ ++.....+|.+...
T Consensus 66 AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~-I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~ 141 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKM-IGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDF 141 (394)
T ss_dssp TTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCE-ECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCC
T ss_pred HhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceE-ccchhhcccccchhhcccCc-eeeecceeeecccc
Confidence 478899999999974 488889999999999999999866 543 55666677889999888765 55577778877765
Q ss_pred CcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccC
Q 046544 85 LSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSL 164 (646)
Q Consensus 85 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L 164 (646)
++..... .+..+...+|.++.+|+.+.+.++. ..++. ..|.++++|+.+++..| ++.+
T Consensus 142 ~~~~~~~--~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~-----~~F~~c~~L~~i~l~~~-~~~I------------- 199 (394)
T 4fs7_A 142 KEITIPE--GVTVIGDEAFATCESLEYVSLPDSM-ETLHN-----GLFSGCGKLKSIKLPRN-LKII------------- 199 (394)
T ss_dssp SEEECCT--TCCEECTTTTTTCTTCCEEECCTTC-CEECT-----TTTTTCTTCCBCCCCTT-CCEE-------------
T ss_pred cccccCc--cccccchhhhcccCCCcEEecCCcc-ceecc-----ccccCCCCceEEEcCCC-ceEe-------------
Confidence 4444333 3344667889999999999997653 44433 35888999998888765 3333
Q ss_pred cEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCC
Q 046544 165 KDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGN 244 (646)
Q Consensus 165 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 244 (646)
...+|.++..|+.+.+..+... +...+....+|+.+.+..+. +.+...+|.++.+|+.+.+..+
T Consensus 200 -------------~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~ 263 (394)
T 4fs7_A 200 -------------RDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNN 263 (394)
T ss_dssp -------------CTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCT
T ss_pred -------------CchhhccccccceeecCCCceE--eehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCC
Confidence 2234455555555555444332 12222333556666655432 2244555666666666666655
Q ss_pred cccccCCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccc
Q 046544 245 KLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTE 324 (646)
Q Consensus 245 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~ 324 (646)
... +....|.++..++.+....+.+.. ..|..+.+|+.+.+.++ ++.+...+|.++++|+.+++..+ ++.+...+
T Consensus 264 ~~~-i~~~~F~~~~~l~~~~~~~~~i~~--~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~a 338 (394)
T 4fs7_A 264 KLR-IGGSLFYNCSGLKKVIYGSVIVPE--KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRS 338 (394)
T ss_dssp TCE-ECSCTTTTCTTCCEEEECSSEECT--TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTT
T ss_pred cce-eeccccccccccceeccCceeecc--ccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHh
Confidence 433 555566666666666655543221 24555666666666544 44455667777777777777643 66677778
Q ss_pred cCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCce
Q 046544 325 IGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDL 382 (646)
Q Consensus 325 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 382 (646)
|.++.+|+.+++..| ++.+...+|.++++|+.+++..+ ++ .+..+|.++++|+.+
T Consensus 339 F~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 339 FRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred ccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 888888888888776 66566778888888888888765 33 334567777776654
No 389
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.68 E-value=4.9e-17 Score=146.33 Aligned_cols=127 Identities=19% Similarity=0.124 Sum_probs=83.0
Q ss_pred CCCceeecCCCccc--ccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEE
Q 046544 258 ASLRILSLSSNELT--SIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLF 335 (646)
Q Consensus 258 ~~L~~L~L~~N~l~--~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ 335 (646)
++|+.|++++|.++ .+|..+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..++.+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 34444444444444 4444444444555555555555443 4556666777777777777766667677778888888
Q ss_pred ccCccCCCc-ccccccCCCCCCEEEccCCcCcccCC---ccccCCCCCCceeCcC
Q 046544 336 LGYNRLEGS-IPDSFGDLISLKFLNLSNNNLSGAIP---TSLEKLSYLEDLNLSF 386 (646)
Q Consensus 336 Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~ 386 (646)
+++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|+.||+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 888888764 34777888888888888888876555 4677888888887763
No 390
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=9.5e-17 Score=144.46 Aligned_cols=126 Identities=23% Similarity=0.271 Sum_probs=93.8
Q ss_pred ccCcEEEeeccccc-ccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEE
Q 046544 162 HSLKDFYMSNCNVS-GGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELE 240 (646)
Q Consensus 162 ~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 240 (646)
++++.|++++|.++ +.+|..+..+++|+.|++++|++++. ..+..+++|++|++++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45666666666666 45667777888888888888888765 6677788888888888888876777777788888888
Q ss_pred ecCCccccc-CCccccCCCCCceeecCCCccccccc----ccccccccccccCC
Q 046544 241 LGGNKLFGS-IPACFSNLASLRILSLSSNELTSIPL----TFWNLKDILQLNFS 289 (646)
Q Consensus 241 L~~N~i~~~-~~~~~~~l~~L~~L~L~~N~l~~lp~----~~~~l~~L~~L~l~ 289 (646)
+++|++++. .+..++.+++|++|++++|.++.+|. .+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 888888764 23677778888888888888877765 45666777777665
No 391
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=1.5e-15 Score=140.98 Aligned_cols=110 Identities=25% Similarity=0.248 Sum_probs=76.4
Q ss_pred cCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEec
Q 046544 163 SLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELG 242 (646)
Q Consensus 163 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 242 (646)
+++.|++++|++++..+..+..+++|++|++++|++++.++..|..+++|++|++++|+|++..+..|..+++|++|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 108 (177)
T 2o6r_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALD 108 (177)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECc
Confidence 34444444444444455566777777777777777776666667777777777777777776666667777777777777
Q ss_pred CCcccccCCccccCCCCCceeecCCCcccc
Q 046544 243 GNKLFGSIPACFSNLASLRILSLSSNELTS 272 (646)
Q Consensus 243 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 272 (646)
+|++++..+..|..+++|++|++++|.+..
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 109 TNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 777776666666777777777777777663
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.63 E-value=2.2e-16 Score=146.40 Aligned_cols=133 Identities=20% Similarity=0.185 Sum_probs=92.3
Q ss_pred ccCCCCCceeecCCCccccccccccccc-ccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCC
Q 046544 254 FSNLASLRILSLSSNELTSIPLTFWNLK-DILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLE 332 (646)
Q Consensus 254 ~~~l~~L~~L~L~~N~l~~lp~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~ 332 (646)
+.++++|+.|++++|.++.+|. +..+. +|+.|++++|.+++. ..+..+++|+.|++++|.++++.+..|+.+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCCSCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCchhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 3444555555555555555542 22322 555666666655543 4566777788888888888776656667888888
Q ss_pred EEEccCccCCCcccc--cccCCCCCCEEEccCCcCcccCCc----cccCCCCCCceeCcCCccee
Q 046544 333 YLFLGYNRLEGSIPD--SFGDLISLKFLNLSNNNLSGAIPT----SLEKLSYLEDLNLSFNKLEG 391 (646)
Q Consensus 333 ~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~ 391 (646)
+|++++|+++. +|. .+..+++|+.|++++|.++ ..|. .+..+++|+.||+++|....
T Consensus 92 ~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 92 ELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp EEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred EEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 88888888864 454 7888888888888888887 4555 37888888999888888764
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.63 E-value=2.8e-18 Score=162.51 Aligned_cols=129 Identities=26% Similarity=0.278 Sum_probs=64.3
Q ss_pred CCCCeEEeecccccCcCch------hhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCccccccccccccccc
Q 046544 210 QKLQGLGLDDNKLEGSIPD------SICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDI 283 (646)
Q Consensus 210 ~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L 283 (646)
..++.++++.+.+.+..|. .|..+++|++|++++|++++ +| .+.++++|++|++++|.++.+|..+..+++|
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L 95 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVADTL 95 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHC
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcCCcC
Confidence 3444444444444443333 66666666666666666664 34 5666666666666666666665544444455
Q ss_pred ccccCCCCcccCCCCCccCccccceEEEcccccccccCc-cccCCCCCCCEEEccCccCC
Q 046544 284 LQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIP-TEIGGLKNLEYLFLGYNRLE 342 (646)
Q Consensus 284 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~ 342 (646)
+.|++++|.+++ +| .+..+++|+.|++++|.+++..+ ..+..+++|++|++++|+++
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccc
Confidence 555555544443 12 23344444444444444443221 23444444444444444443
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.62 E-value=2.9e-16 Score=145.56 Aligned_cols=111 Identities=23% Similarity=0.227 Sum_probs=63.9
Q ss_pred ccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCC
Q 046544 181 EITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASL 260 (646)
Q Consensus 181 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 260 (646)
.+.++++|+.|++++|+++.+ |......++|++|++++|.|++. ..|..+++|++|+|++|+|++..+..|..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 345556666666666666643 33222223666666666666643 456666666666666666665555555666666
Q ss_pred ceeecCCCccccccc--ccccccccccccCCCCccc
Q 046544 261 RILSLSSNELTSIPL--TFWNLKDILQLNFSSNFLT 294 (646)
Q Consensus 261 ~~L~L~~N~l~~lp~--~~~~l~~L~~L~l~~N~l~ 294 (646)
++|++++|.++.+|. .+..+++|+.|++++|.++
T Consensus 91 ~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 91 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC
Confidence 666666666666554 4444445555555555444
No 395
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.61 E-value=3.4e-18 Score=161.95 Aligned_cols=155 Identities=22% Similarity=0.284 Sum_probs=115.9
Q ss_pred hcCCCCCcEEEecCCcccccCCc------cccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCc
Q 046544 230 ICRLTELYELELGGNKLFGSIPA------CFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGN 303 (646)
Q Consensus 230 ~~~l~~L~~L~L~~N~i~~~~~~------~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 303 (646)
+.....++.++++.+.+.+..|. .|..+++|++|++++|.++.+| .+..+++|+.|++++|.++ .+|..+..
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCCC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcccc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 55566777888888888777666 7888888888888888888887 7777888888888888887 45666677
Q ss_pred cccceEEEcccccccccCccccCCCCCCCEEEccCccCCCccc-ccccCCCCCCEEEccCCcCcccCCcc----------
Q 046544 304 LKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIP-DSFGDLISLKFLNLSNNNLSGAIPTS---------- 372 (646)
Q Consensus 304 l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~---------- 372 (646)
+++|+.|++++|.++++ | .++.+++|++|++++|++++..+ ..+..+++|++|++++|.+++..|..
T Consensus 92 ~~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~ 169 (198)
T 1ds9_A 92 ADTLEELWISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEV 169 (198)
T ss_dssp HHHCSEEEEEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHH
T ss_pred CCcCCEEECcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHH
Confidence 77888888888888764 3 57777788888888888875433 46777788888888888877665542
Q ss_pred ccCCCCCCceeCcCCcce
Q 046544 373 LEKLSYLEDLNLSFNKLE 390 (646)
Q Consensus 373 ~~~l~~L~~L~L~~N~l~ 390 (646)
+..+++|+.|| +|+++
T Consensus 170 ~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 170 VKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHCSSCSEEC--CGGGT
T ss_pred HHhCCCcEEEC--CcccC
Confidence 66777777765 55554
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.57 E-value=5.9e-15 Score=135.74 Aligned_cols=90 Identities=21% Similarity=0.199 Sum_probs=63.2
Q ss_pred ccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeC
Q 046544 305 KVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNL 384 (646)
Q Consensus 305 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 384 (646)
+.|+.|+|++|.++++.|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 44556666666666666666777777777777777777666666777777777777777777666666777777777777
Q ss_pred cCCcceeecc
Q 046544 385 SFNKLEGEIP 394 (646)
Q Consensus 385 ~~N~l~~~~p 394 (646)
++|++++.++
T Consensus 110 ~~N~~~c~c~ 119 (170)
T 3g39_A 110 LNNPWDCACS 119 (170)
T ss_dssp CSSCBCTTBG
T ss_pred CCCCCCCCch
Confidence 7777776655
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.56 E-value=1.1e-14 Score=134.06 Aligned_cols=108 Identities=25% Similarity=0.228 Sum_probs=95.6
Q ss_pred CCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccC
Q 046544 259 SLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGY 338 (646)
Q Consensus 259 ~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 338 (646)
+.+.+++++|.++++|..+. ++|+.|++++|.+++..|..|..+++|+.|+|++|+++++.+..|.++++|++|+|++
T Consensus 10 ~~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 10 SGTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp ETTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 35778888888888887664 7888899999999888888899999999999999999988888899999999999999
Q ss_pred ccCCCcccccccCCCCCCEEEccCCcCccc
Q 046544 339 NRLEGSIPDSFGDLISLKFLNLSNNNLSGA 368 (646)
Q Consensus 339 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 368 (646)
|+|++..+..|..+++|+.|+|++|.++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 999988888899999999999999999854
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.54 E-value=1.5e-14 Score=133.44 Aligned_cols=90 Identities=22% Similarity=0.279 Sum_probs=55.8
Q ss_pred ccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeC
Q 046544 305 KVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNL 384 (646)
Q Consensus 305 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 384 (646)
+.|+.|+|++|.++++.|..|+++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 34555555555555555566666666666666666666555555666666666666666666555555666666666666
Q ss_pred cCCcceeecc
Q 046544 385 SFNKLEGEIP 394 (646)
Q Consensus 385 ~~N~l~~~~p 394 (646)
++|++.+.++
T Consensus 113 ~~N~~~c~~~ 122 (174)
T 2r9u_A 113 YNNPWDCECR 122 (174)
T ss_dssp CSSCBCTTBG
T ss_pred CCCCcccccc
Confidence 6666665443
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.53 E-value=2.5e-14 Score=131.96 Aligned_cols=106 Identities=24% Similarity=0.243 Sum_probs=92.5
Q ss_pred CceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCc
Q 046544 260 LRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYN 339 (646)
Q Consensus 260 L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 339 (646)
-+.+++++|.++++|..+. ++|+.|++++|.+++..|..|..+++|+.|+|++|+|+++.+..|..+++|++|+|++|
T Consensus 14 ~~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 14 QTLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SSEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CcEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 3678888888888887664 78888888888888888888999999999999999999887788899999999999999
Q ss_pred cCCCcccccccCCCCCCEEEccCCcCcc
Q 046544 340 RLEGSIPDSFGDLISLKFLNLSNNNLSG 367 (646)
Q Consensus 340 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 367 (646)
+|++..+..|..+++|+.|+|++|.+..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 9997777779999999999999999984
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.52 E-value=1.8e-12 Score=136.26 Aligned_cols=335 Identities=14% Similarity=0.137 Sum_probs=174.1
Q ss_pred ccccCCcCccCCC-CCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCc---ccccCCccccCCCCCcEEEcccCcccc
Q 046544 22 LVGTVPAAIFNMS-MLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNN---FSGTIPRFIFNASKLSILELSQNSFSG 97 (646)
Q Consensus 22 l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~---l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 97 (646)
++.+...+|.+.+ .|+.+.+-.+ ++. +...+|..+.+|+.+.++.|. ++.....+|.++.+|+.+.+..+ ++.
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~-Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~ 127 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VTE-IGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTE 127 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CCE-ECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSE
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-eeE-EhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cce
Confidence 3445556666663 4777777543 432 445555566677777776553 55555666777777777666544 454
Q ss_pred ccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEeeccccccc
Q 046544 98 FIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGG 177 (646)
Q Consensus 98 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~ 177 (646)
+...+|.++.+|+.+.+..+ ++.+.. ..|.++.+|+.+.+.++ +..+....+.. ..|+.+.+..+- ...
T Consensus 128 I~~~aF~~c~~L~~i~lp~~-~~~I~~-----~~F~~c~~L~~i~~~~~-~~~I~~~aF~~---~~l~~i~ip~~~-~~i 196 (394)
T 4gt6_A 128 IDSEAFHHCEELDTVTIPEG-VTSVAD-----GMFSYCYSLHTVTLPDS-VTAIEERAFTG---TALTQIHIPAKV-TRI 196 (394)
T ss_dssp ECTTTTTTCTTCCEEECCTT-CCEECT-----TTTTTCTTCCEEECCTT-CCEECTTTTTT---CCCSEEEECTTC-CEE
T ss_pred ehhhhhhhhcccccccccce-eeeecc-----cceecccccccccccce-eeEeccccccc---cceeEEEECCcc-ccc
Confidence 66667777777777777543 333322 24666777777776544 33333222211 235555544322 223
Q ss_pred CCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCcccccCCccccCC
Q 046544 178 IPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNL 257 (646)
Q Consensus 178 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l 257 (646)
...+|.++.++.......+.........+........- ...+.....+..+.+. +.+..+...+|.++
T Consensus 197 ~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c 264 (394)
T 4gt6_A 197 GTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYA-----------LIRYPSQREDPAFKIP-NGVARIETHAFDSC 264 (394)
T ss_dssp CTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEE-----------EEECCTTCCCSEEECC-TTEEEECTTTTTTC
T ss_pred ccchhhhccccceecccccccccccceeeccccccccc-----------ccccccccccceEEcC-CcceEcccceeeec
Confidence 34455555555555544443321111111110000000 0001112223333332 22333445566666
Q ss_pred CCCceeecCCCcccccc-cccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEc
Q 046544 258 ASLRILSLSSNELTSIP-LTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFL 336 (646)
Q Consensus 258 ~~L~~L~L~~N~l~~lp-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L 336 (646)
.+|+.+.+.++.. .++ ..|.+++.|+.+.+. +.++.+...+|.++.+|+.+++..+ ++.+...+|.++.+|+.+.+
T Consensus 265 ~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 265 AYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 6666666654432 332 245556666666664 3344445566777777777777643 55566677777777777777
Q ss_pred cCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCcc
Q 046544 337 GYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKL 389 (646)
Q Consensus 337 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 389 (646)
..+ ++.+...+|.++++|+.+++.+|.... ..+....+|+.+.+..|.+
T Consensus 342 p~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 342 PSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp CTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred Ccc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 544 555666777777778877777775432 3456667777777665544
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.50 E-value=1.6e-12 Score=136.63 Aligned_cols=328 Identities=12% Similarity=0.137 Sum_probs=199.1
Q ss_pred ccCCC-CCCEEECCCCcccccCCcCccCCCCCCEEECcCCc---CcccCCccCcCCCCCCCEEEccCCcccccCCccccC
Q 046544 6 ISNLQ-NLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNS---LLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFN 81 (646)
Q Consensus 6 ~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~---l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 81 (646)
|.+.+ .|+.+.+-.+ ++.+...+|.++++|+.+.++.|. ++. +...+|..+.+|+.+.+..+ ++......|..
T Consensus 59 F~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~-Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~ 135 (394)
T 4gt6_A 59 FCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKK-IGRQAFMFCSELTDIPILDS-VTEIDSEAFHH 135 (394)
T ss_dssp TTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCE-ECTTTTTTCTTCCBCGGGTT-CSEECTTTTTT
T ss_pred ccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeE-echhhchhcccceeeccCCc-cceehhhhhhh
Confidence 55664 5999999754 888999999999999999998874 433 45566667889998888765 55577888999
Q ss_pred CCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhcccc
Q 046544 82 ASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLS 161 (646)
Q Consensus 82 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 161 (646)
+.+|+.+.+..+ +..+...+|.+..+|+.+.+..+ ++.+... +|.+ .+|+.+.+..+-. .+....+.. .
T Consensus 136 c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~-----aF~~-~~l~~i~ip~~~~-~i~~~af~~--c 204 (394)
T 4gt6_A 136 CEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEER-----AFTG-TALTQIHIPAKVT-RIGTNAFSE--C 204 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTT-----TTTT-CCCSEEEECTTCC-EECTTTTTT--C
T ss_pred hcccccccccce-eeeecccceecccccccccccce-eeEeccc-----cccc-cceeEEEECCccc-ccccchhhh--c
Confidence 999999999755 55588889999999999999765 5554432 3443 5688888865532 222222211 2
Q ss_pred ccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEe
Q 046544 162 HSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELEL 241 (646)
Q Consensus 162 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 241 (646)
..++......+......-..+........ ....+.....+..+.+.. .+..+...+|.++.+|+.+.+
T Consensus 205 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~l 272 (394)
T 4gt6_A 205 FALSTITSDSESYPAIDNVLYEKSANGDY-----------ALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKM 272 (394)
T ss_dssp TTCCEEEECCSSSCBSSSCEEEECTTSCE-----------EEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEEC
T ss_pred cccceecccccccccccceeecccccccc-----------cccccccccccceEEcCC-cceEcccceeeecccccEEec
Confidence 34555555444333211111111110000 000111222333333332 223344555666666666666
Q ss_pred cCCcccccCCccccCCCCCceeecCCCccccccc-ccccccccccccCCCCcccCCCCCccCccccceEEEccccccccc
Q 046544 242 GGNKLFGSIPACFSNLASLRILSLSSNELTSIPL-TFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSV 320 (646)
Q Consensus 242 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~ 320 (646)
..+.. .+...+|.++++|+.+.+. +.+++++. .|.++.+|+.+++..+ ++.+...+|.++.+|+.+.+..+ ++.+
T Consensus 273 p~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I 348 (394)
T 4gt6_A 273 PDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKI 348 (394)
T ss_dssp CTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBC
T ss_pred ccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEE
Confidence 54433 2555566666666666664 44555544 4555666666666544 44455677888888888888644 7767
Q ss_pred CccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCc
Q 046544 321 IPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLS 366 (646)
Q Consensus 321 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 366 (646)
...+|.++.+|+.+++.+|... -..|....+|+.+.+..|.+.
T Consensus 349 ~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 349 PESAFSNCTALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp CGGGGTTCTTCCEEEESSCHHH---HHTCBCCCCC-----------
T ss_pred hHhHhhCCCCCCEEEECCceee---hhhhhccCCCCEEEeCCCCEE
Confidence 7788888899999998887653 246777788888888776543
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.43 E-value=1.5e-13 Score=142.02 Aligned_cols=93 Identities=26% Similarity=0.233 Sum_probs=54.3
Q ss_pred cCccccceEEEccc-ccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCCCC
Q 046544 301 IGNLKVLIGIDFSM-NNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYL 379 (646)
Q Consensus 301 ~~~l~~L~~L~ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 379 (646)
+..+++|+.|+|++ |.|+++.+..|+++++|+.|+|++|+|++.+|..|.++++|+.|+|++|+|++..+..|..++ |
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L 105 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-L 105 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-C
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-c
Confidence 44455555555553 555555555566666666666666666655555666666666666666666654444455444 6
Q ss_pred CceeCcCCcceeecc
Q 046544 380 EDLNLSFNKLEGEIP 394 (646)
Q Consensus 380 ~~L~L~~N~l~~~~p 394 (646)
+.|+|++|+|.+.++
T Consensus 106 ~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 106 QELVLSGNPLHCSCA 120 (347)
T ss_dssp CEEECCSSCCCCCGG
T ss_pred eEEEeeCCCccCCCc
Confidence 666666666665443
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.42 E-value=8e-16 Score=159.93 Aligned_cols=150 Identities=15% Similarity=0.095 Sum_probs=73.8
Q ss_pred CCCCEEEccCCcccccCCcccc-CCCCCcEEEcccCccccccCccc-----cCcCCCCEEEccCCCCCCCCCcccccccC
Q 046544 59 PNLEALLLWGNNFSGTIPRFIF-NASKLSILELSQNSFSGFIPNTF-----GNLRNLEWLNLRDNYLTSSTPELSFLSSL 132 (646)
Q Consensus 59 ~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~~~l 132 (646)
++|++|+|++|.|+......+. .+++|++|+|++|.|++.....+ ...++|++|+|++|.|+...... +...+
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~-l~~~L 179 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAV-LMEGL 179 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHH-HHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHH-HHHHH
Confidence 4566666666665533222222 34456666666666654433333 23456666677666665421111 22334
Q ss_pred CCCCCCCEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEccCCcccccc----CccccC
Q 046544 133 SNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSI----PITLSK 208 (646)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~ 208 (646)
..+++|++|+|++|.|...... .++..+...++|++|+|++|.|+... +..+..
T Consensus 180 ~~~~~L~~L~Ls~N~l~~~g~~----------------------~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~ 237 (372)
T 3un9_A 180 AGNTSVTHLSLLHTGLGDEGLE----------------------LLAAQLDRNRQLQELNVAYNGAGDTAALALARAARE 237 (372)
T ss_dssp HTCSSCCEEECTTSSCHHHHHH----------------------HHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHH
T ss_pred hcCCCcCEEeCCCCCCCcHHHH----------------------HHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHh
Confidence 5566677777777766432100 11233344445555555555554321 222334
Q ss_pred CCCCCeEEeecccccCcCchhhc
Q 046544 209 LQKLQGLGLDDNKLEGSIPDSIC 231 (646)
Q Consensus 209 l~~L~~L~L~~N~l~~~~~~~~~ 231 (646)
.++|++|+|++|.|++.....+.
T Consensus 238 ~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 238 HPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp CSSCCEEECTTSSCCHHHHHHHH
T ss_pred CCCCCEEeccCCCCCHHHHHHHH
Confidence 45566666666666544444443
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.41 E-value=1.6e-13 Score=141.74 Aligned_cols=132 Identities=19% Similarity=0.116 Sum_probs=93.6
Q ss_pred eeecCCC-cccccccccccccccccccCCC-CcccCCCCCccCccccceEEEcccccccccCccccCCCCCCCEEEccCc
Q 046544 262 ILSLSSN-ELTSIPLTFWNLKDILQLNFSS-NFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYN 339 (646)
Q Consensus 262 ~L~L~~N-~l~~lp~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 339 (646)
.++++++ .|+.+|. +..+++|+.|+|++ |.+++..+..|.++++|+.|+|++|+|+++.|..|+++++|++|+|++|
T Consensus 12 ~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 12 GLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp CEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 4566776 7777777 77777777777775 7777766677888888888888888888888888888888888888888
Q ss_pred cCCCcccccccCCCCCCEEEccCCcCcccCC-ccccCCCCCCceeCcCCcceeeccC
Q 046544 340 RLEGSIPDSFGDLISLKFLNLSNNNLSGAIP-TSLEKLSYLEDLNLSFNKLEGEIPR 395 (646)
Q Consensus 340 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~ 395 (646)
+|++.++..|..++ |+.|+|++|.+...-. .+|..+.......+..+.++|..|.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 88877777777666 8888888888874221 1222222223334455667665554
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.35 E-value=2.9e-14 Score=148.14 Aligned_cols=162 Identities=18% Similarity=0.171 Sum_probs=95.6
Q ss_pred CCCCeEEeecccccCcCchhhcCC-----CCCcEEEecCCcccccCCccc-cCCCCCceeecCCCccccccc-ccccccc
Q 046544 210 QKLQGLGLDDNKLEGSIPDSICRL-----TELYELELGGNKLFGSIPACF-SNLASLRILSLSSNELTSIPL-TFWNLKD 282 (646)
Q Consensus 210 ~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~i~~~~~~~~-~~l~~L~~L~L~~N~l~~lp~-~~~~l~~ 282 (646)
+.|+.|+|++|.|+......+... ++|++|+|++|.++......+ ..+++|+.|+|++|.|+.... .+..
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~--- 148 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRD--- 148 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHH---
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHH---
Confidence 456666666666664333333322 456666666666643322222 234455556666555543221 1110
Q ss_pred cccccCCCCcccCCCCCcc-CccccceEEEccccccccc----CccccCCCCCCCEEEccCccCCCcc----cccccCCC
Q 046544 283 ILQLNFSSNFLTGPLPLEI-GNLKVLIGIDFSMNNFSSV----IPTEIGGLKNLEYLFLGYNRLEGSI----PDSFGDLI 353 (646)
Q Consensus 283 L~~L~l~~N~l~~~~~~~~-~~l~~L~~L~ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~ 353 (646)
.+ ...+.|+.|+|++|.++.. ++..+..+++|++|+|++|.|++.. +..+...+
T Consensus 149 -----------------~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~ 211 (372)
T 3un9_A 149 -----------------LLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNR 211 (372)
T ss_dssp -----------------HHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCS
T ss_pred -----------------HHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCC
Confidence 01 1234566777777766542 2334466778888888888887532 55667777
Q ss_pred CCCEEEccCCcCccc----CCccccCCCCCCceeCcCCccee
Q 046544 354 SLKFLNLSNNNLSGA----IPTSLEKLSYLEDLNLSFNKLEG 391 (646)
Q Consensus 354 ~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~ 391 (646)
+|++|+|++|.|+.. ++..+...++|++|+|++|+++.
T Consensus 212 ~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 212 QLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp CCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred CcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 888888888888753 33445566888888888888875
No 406
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.34 E-value=8.4e-11 Score=122.87 Aligned_cols=315 Identities=10% Similarity=0.059 Sum_probs=159.2
Q ss_pred ccCCCCCCEEECCCCcccccCCcCccCCCCCCEEECcCCcCcccCCccCcCCCCCCCEEEccCCcccccCCccccCCCCC
Q 046544 6 ISNLQNLEELDLRHNKLVGTVPAAIFNMSMLKLLHLQNNSLLGCLSSIADVRLPNLEALLLWGNNFSGTIPRFIFNASKL 85 (646)
Q Consensus 6 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 85 (646)
+..-.+|+.+.+.. .++.+...+|.++.+|+.+.|..+ ++. +...+|... +|+.+.+..+ ++.....+|.. .+|
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~-Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L 115 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTS-IGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDL 115 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCE-ECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCC
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceE-echhhhcCC-CCceEECCce-eeEeccceecc-CCc
Confidence 33445677777753 366677777777777777777644 443 444444443 5666666543 44344445544 367
Q ss_pred cEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCCCEEECCCCCCCCcCCcchhccccccCc
Q 046544 86 SILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSLTFIHLSDNPLDGILSKTSIGNLSHSLK 165 (646)
Q Consensus 86 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~ 165 (646)
+.+++..+ +..+...+|.+. +|+...+-.+ ++.+.. ..|.++.+++...+..+..........
T Consensus 116 ~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~-----~~f~~~~~l~~~~~~~~~~~~~~~~~~--------- 178 (379)
T 4h09_A 116 DDFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKD-----GIGYKAENLEKIEVSSNNKNYVAENYV--------- 178 (379)
T ss_dssp SEEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECS-----CTTTTCTTCCEEEECTTCSSEEEETTE---------
T ss_pred ccccCCCc-cccccccccccc-eeeeeeccce-eecccc-----chhcccccccccccccccceeecccce---------
Confidence 77777654 333555566554 4555554432 333221 235666667666665544322110000
Q ss_pred EEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCCc
Q 046544 166 DFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGNK 245 (646)
Q Consensus 166 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 245 (646)
....+. .....+.....+..+.+..+.- ......+....+|+.+.+..+ +..+...+|.++.+|+.+.+..+
T Consensus 179 --~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~- 250 (379)
T 4h09_A 179 --LYNKNK---TILESYPAAKTGTEFTIPSTVK-TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN- 250 (379)
T ss_dssp --EEETTS---SEEEECCTTCCCSEEECCTTCC-EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-
T ss_pred --eccccc---ceecccccccccccccccccee-EEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-
Confidence 000000 0112223333334333333221 133344444455555555433 22244444555555555555443
Q ss_pred ccccCCccccCCCCCceeecCCCcccccccccccccccccccCCCCcccCCCCCccCccccceEEEcccccccccCcccc
Q 046544 246 LFGSIPACFSNLASLRILSLSSNELTSIPLTFWNLKDILQLNFSSNFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPTEI 325 (646)
Q Consensus 246 i~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~ 325 (646)
++.+...+|.++.+|+.+.+..+ ++. .....|.++++|+.+++.++.++.+...+|
T Consensus 251 v~~I~~~aF~~~~~l~~i~l~~~-i~~-----------------------i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF 306 (379)
T 4h09_A 251 VTSIGSFLLQNCTALKTLNFYAK-VKT-----------------------VPYLLCSGCSNLTKVVMDNSAIETLEPRVF 306 (379)
T ss_dssp CCEECTTTTTTCTTCCEEEECCC-CSE-----------------------ECTTTTTTCTTCCEEEECCTTCCEECTTTT
T ss_pred ccEeCccccceeehhcccccccc-cee-----------------------ccccccccccccccccccccccceehhhhh
Confidence 33344445555555555544322 332 333455556666666666666665666666
Q ss_pred CCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCC
Q 046544 326 GGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLS 377 (646)
Q Consensus 326 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 377 (646)
.++.+|+.+.|..+ ++.+...+|.++++|+.+.+..+ ++.+-..+|.+..
T Consensus 307 ~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 307 MDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp TTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred cCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 66666776666544 55455566777777777766544 5545555665553
No 407
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.34 E-value=3.5e-12 Score=126.18 Aligned_cols=146 Identities=14% Similarity=0.056 Sum_probs=113.7
Q ss_pred HHhCCCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCC-CCCceeEEEEEecCCeeEEEE
Q 046544 489 RATNGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR-HRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 489 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~~~~~~~~~~~~~lv~ 567 (646)
....+|+.....+.|+.+.||++... ++.+++|+...........+.+|+++++.+. |..++++++++...+..|+||
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 44567888888888899999999754 6789999987532222345788999999884 677889999998888999999
Q ss_pred EecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 046544 568 EYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG--------------------------------------- 608 (646)
Q Consensus 568 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--------------------------------------- 608 (646)
||++|.++.+.+.. ......++.+++++++.||..
T Consensus 90 e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 90 SEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp ECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred EecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 99999999876321 112346888999999999951
Q ss_pred -----------------CCCCeEecCCCCCCEEEcCCCcEEEEeecCccc
Q 046544 609 -----------------CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641 (646)
Q Consensus 609 -----------------~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~ 641 (646)
....++|+|++|.||+++++..+.|+||+.|..
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 014589999999999998776678999998753
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.30 E-value=2.1e-10 Score=119.85 Aligned_cols=299 Identities=13% Similarity=0.107 Sum_probs=175.1
Q ss_pred CCCCEEEccCCcccccCCccccCCCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCCCCCcccccccCCCCCCC
Q 046544 59 PNLEALLLWGNNFSGTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTSSTPELSFLSSLSNCKSL 138 (646)
Q Consensus 59 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L 138 (646)
.+|+.+.+.. .++.....+|.++.+|+.++|..+ ++.+...+|.+. +|+.+.+..+ ++.+... +|.++ +|
T Consensus 46 ~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~-----aF~~~-~L 115 (379)
T 4h09_A 46 DRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDY-----VFQGT-DL 115 (379)
T ss_dssp GGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTT-----TTTTC-CC
T ss_pred cCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccc-----eeccC-Cc
Confidence 3455555543 344455556666666666666543 555666666665 4555555432 3333221 23333 56
Q ss_pred CEEECCCCCCCCcCCcchhccccccCcEEEeecccccccCCcccccCCCCCEEEccCCccccccCccccCCCCCCeEEee
Q 046544 139 TFIHLSDNPLDGILSKTSIGNLSHSLKDFYMSNCNVSGGIPEEITNLTNSITIDLGGNKLNGSIPITLSKLQKLQGLGLD 218 (646)
Q Consensus 139 ~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 218 (646)
+.+.+..+ +..+....+.. .+++...+.. .++.+...+|....+++.+.+..+.........+ .
T Consensus 116 ~~i~lp~~-~~~i~~~~F~~---~~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~-----------~ 179 (379)
T 4h09_A 116 DDFEFPGA-TTEIGNYIFYN---SSVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYV-----------L 179 (379)
T ss_dssp SEEECCTT-CCEECTTTTTT---CCCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTE-----------E
T ss_pred ccccCCCc-ccccccccccc---ceeeeeeccc-eeeccccchhcccccccccccccccceeecccce-----------e
Confidence 66666543 22222111111 1233333322 2222334445555555555544433221110000 0
Q ss_pred cccccCcCchhhcCCCCCcEEEecCCcccccCCccccCCCCCceeecCCCcccccc-cccccccccccccCCCCcccCCC
Q 046544 219 DNKLEGSIPDSICRLTELYELELGGNKLFGSIPACFSNLASLRILSLSSNELTSIP-LTFWNLKDILQLNFSSNFLTGPL 297 (646)
Q Consensus 219 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~lp-~~~~~l~~L~~L~l~~N~l~~~~ 297 (646)
.+.. ......+.....+....+..+.. ......|....+|+.+.+..+ ++.++ ..|.+...|+.+.+..+ ++.+.
T Consensus 180 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~ 255 (379)
T 4h09_A 180 YNKN-KTILESYPAAKTGTEFTIPSTVK-TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIG 255 (379)
T ss_dssp EETT-SSEEEECCTTCCCSEEECCTTCC-EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEEC
T ss_pred cccc-cceecccccccccccccccccee-EEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeC
Confidence 0000 11223344445555555544332 245556666777777777544 44443 34666777777777665 44456
Q ss_pred CCccCccccceEEEcccccccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEccCCcCcccCCccccCCC
Q 046544 298 PLEIGNLKVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLS 377 (646)
Q Consensus 298 ~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 377 (646)
..+|.++..|+.+.+..+ ++.+...+|.++.+|+.+.+.++.++.+...+|.++.+|+.++|.++ ++.+-..+|.+++
T Consensus 256 ~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~ 333 (379)
T 4h09_A 256 SFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCK 333 (379)
T ss_dssp TTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred ccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCC
Confidence 678888899999998654 66677789999999999999999998778899999999999999866 7767778999999
Q ss_pred CCCceeCcCCcce
Q 046544 378 YLEDLNLSFNKLE 390 (646)
Q Consensus 378 ~L~~L~L~~N~l~ 390 (646)
+|+.+.+..+ ++
T Consensus 334 ~L~~i~ip~~-v~ 345 (379)
T 4h09_A 334 ALSTISYPKS-IT 345 (379)
T ss_dssp TCCCCCCCTT-CC
T ss_pred CCCEEEECCc-cC
Confidence 9999998765 44
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.20 E-value=3.6e-11 Score=118.62 Aligned_cols=137 Identities=16% Similarity=0.075 Sum_probs=100.7
Q ss_pred CCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCC--ceeEEEEEecCCeeEEEEEec
Q 046544 493 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRN--LIKVISSCSNEEFKALVLEYK 570 (646)
Q Consensus 493 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~~~~~~~~~~~~~lv~e~~ 570 (646)
++......+.|..+.||++...+|+.+++|+.... ....+.+|+++++.+++.+ +++++++...++..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 44443333456669999998777888999987643 2245678999998885444 566888888888899999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------------
Q 046544 571 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC----------------------------------------- 609 (646)
Q Consensus 571 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~----------------------------------------- 609 (646)
+|.++. .. . .+ ...++.++++.+..+|...
T Consensus 98 ~G~~l~--~~-~---~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T 1nd4_A 98 PGQDLL--SS-H---LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 168 (264)
T ss_dssp SSEETT--TS-C---CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred CCcccC--cC-c---CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence 998884 21 1 12 2357788888888888421
Q ss_pred --------------CCCeEecCCCCCCEEEcCCCcEEEEeecCccc
Q 046544 610 --------------LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641 (646)
Q Consensus 610 --------------~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~ 641 (646)
...++|+|++|.||++++++.++|+|||.|..
T Consensus 169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11299999999999998877778999998764
No 410
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.99 E-value=1e-09 Score=113.60 Aligned_cols=143 Identities=14% Similarity=0.160 Sum_probs=105.3
Q ss_pred CcceeecccccceEEEEEeCCCcEEEEEEEe--ccC-CchHHHHHHHHHHHHhCC--CCCceeEEEEEecC---CeeEEE
Q 046544 495 SENNLIGRGGFGSVYKARLGDGMEVAVKVFN--LQC-GRAFKSFAVECEMMKSIR--HRNLIKVISSCSNE---EFKALV 566 (646)
Q Consensus 495 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~--H~niv~~~~~~~~~---~~~~lv 566 (646)
...+.++.|.++.||+.+..+ ..+++|+.. ... ......+.+|+++++.++ +..+++++.++... +..|+|
T Consensus 41 ~~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 41 LSVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp CEEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred ceEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 345788999999999998754 578888765 322 122346778999999886 45678888888766 458999
Q ss_pred EEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------------------
Q 046544 567 LEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC------------------------------------- 609 (646)
Q Consensus 567 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~------------------------------------- 609 (646)
|||++|..+.+... ..++..+...++.++++++..||...
T Consensus 120 me~v~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 120 MEFVSGRVLWDQSL---PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp EECCCCBCCCCTTC---TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred EEecCCeecCCCcc---ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 99999987754211 23567778889999999999999520
Q ss_pred ------------------CCCeEecCCCCCCEEEcCCC--cEEEEeecCccc
Q 046544 610 ------------------LAPVIHCDLKPDNVLLDDNL--VAYLSDFGIAKL 641 (646)
Q Consensus 610 ------------------~~~iiHrdlk~~Nil~~~~~--~~ki~DfGla~~ 641 (646)
...++|+|+++.||+++.++ .+.|+||+.|..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 25699999999999998765 368999998864
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.95 E-value=1.5e-10 Score=119.23 Aligned_cols=84 Identities=21% Similarity=0.216 Sum_probs=59.6
Q ss_pred ccccceEEEcccccccccCcccc---CCCCCCCEEEccCccCCCcc----cccccCCCCCCEEEccCCcCcccCCccccC
Q 046544 303 NLKVLIGIDFSMNNFSSVIPTEI---GGLKNLEYLFLGYNRLEGSI----PDSFGDLISLKFLNLSNNNLSGAIPTSLEK 375 (646)
Q Consensus 303 ~l~~L~~L~ls~N~l~~~~~~~~---~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 375 (646)
.+++|+.|+|++|.++...+..+ ..+++|++|+|+.|.+.+.. +..+..+++|+.|+|++|.|+...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 46788888888888764333222 35788999999999988643 333456789999999999988654444443
Q ss_pred -CCCCCceeCcCCc
Q 046544 376 -LSYLEDLNLSFNK 388 (646)
Q Consensus 376 -l~~L~~L~L~~N~ 388 (646)
+ ...+++++|+
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 3 4668998887
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.88 E-value=4.5e-10 Score=115.61 Aligned_cols=184 Identities=18% Similarity=0.213 Sum_probs=104.2
Q ss_pred CCCCEEEccCCcccc-c-------cCccccCCCCCCeEEeeccccc---------CcCchhhcCCCCCcEEEecCCcccc
Q 046544 186 TNSITIDLGGNKLNG-S-------IPITLSKLQKLQGLGLDDNKLE---------GSIPDSICRLTELYELELGGNKLFG 248 (646)
Q Consensus 186 ~~L~~L~L~~N~l~~-~-------~~~~~~~l~~L~~L~L~~N~l~---------~~~~~~~~~l~~L~~L~L~~N~i~~ 248 (646)
+.++.|.+......+ . ...+...+++|+.|.+.++... +.++..+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 345667777554331 1 1122345677888877655321 123345566677777777766311
Q ss_pred cCCccccCCCCCceeecCCCcccccc-cccc--cccccccccCCC--CcccCCCCCccCccccceEEEcccccccccCcc
Q 046544 249 SIPACFSNLASLRILSLSSNELTSIP-LTFW--NLKDILQLNFSS--NFLTGPLPLEIGNLKVLIGIDFSMNNFSSVIPT 323 (646)
Q Consensus 249 ~~~~~~~~l~~L~~L~L~~N~l~~lp-~~~~--~l~~L~~L~l~~--N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~ 323 (646)
..+. +. +++|+.|++..|.++.-. ..+. .+++|+.|+|+. |...+. . .+..+ ..
T Consensus 186 ~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~--~----------------~~~~l-~~ 244 (362)
T 2ra8_A 186 SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFD--G----------------DMNVF-RP 244 (362)
T ss_dssp BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCC--S----------------CGGGT-GG
T ss_pred eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccc--h----------------hHHHH-HH
Confidence 1122 32 566777777666654211 1111 344444444431 111100 0 01111 11
Q ss_pred cc--CCCCCCCEEEccCccCCCcccccc---cCCCCCCEEEccCCcCccc----CCccccCCCCCCceeCcCCccee
Q 046544 324 EI--GGLKNLEYLFLGYNRLEGSIPDSF---GDLISLKFLNLSNNNLSGA----IPTSLEKLSYLEDLNLSFNKLEG 391 (646)
Q Consensus 324 ~~--~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~ 391 (646)
.+ ..+++|+.|+|++|.+.+..+..+ ..+++|++|+|+.|.+++. ++..+..+++|+.|+|++|.++.
T Consensus 245 ~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 245 LFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp GSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred HHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 12 357899999999999875444333 3578999999999999864 34445667999999999999874
No 413
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.61 E-value=1.7e-07 Score=95.16 Aligned_cols=136 Identities=18% Similarity=0.182 Sum_probs=99.5
Q ss_pred CCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCC----CCceeEEEEEecCCeeEEEEE
Q 046544 493 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRH----RNLIKVISSCSNEEFKALVLE 568 (646)
Q Consensus 493 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H----~niv~~~~~~~~~~~~~lv~e 568 (646)
.....+.++.|....||+. |..+++|+.... .....+.+|.++++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5666788999999999988 566888876422 223567889999888866 234555554 56789999
Q ss_pred ecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------------
Q 046544 569 YKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC--------------------------------------- 609 (646)
Q Consensus 569 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--------------------------------------- 609 (646)
|++|.++...... .++..+...++.++++.++.||...
T Consensus 108 ~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 9999888643321 2456666777788888888877321
Q ss_pred ---------------------CCCeEecCCCCCCEEEcCCCcEEEEeecCccc
Q 046544 610 ---------------------LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641 (646)
Q Consensus 610 ---------------------~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~ 641 (646)
...++|+|++|.||+++.+..+.|+||+.|..
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 12359999999999999877789999998754
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.50 E-value=2.7e-07 Score=92.91 Aligned_cols=136 Identities=21% Similarity=0.218 Sum_probs=97.4
Q ss_pred ceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhC-CCCC--ceeEEEEEecCC---eeEEEEEec
Q 046544 497 NNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSI-RHRN--LIKVISSCSNEE---FKALVLEYK 570 (646)
Q Consensus 497 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~n--iv~~~~~~~~~~---~~~lv~e~~ 570 (646)
.+.++.|.+..||+.. ..+++|+.... .....+.+|+++++.+ .+.. +.+++......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999763 45888875422 3346788899999887 3333 445555543333 458999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 046544 571 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG------------------------------------------ 608 (646)
Q Consensus 571 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~------------------------------------------ 608 (646)
+|.++.+.... .++..+...++.++++.++.+|..
T Consensus 99 ~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 99888654332 356667777888888888888841
Q ss_pred -------------CCCCeEecCCCCCCEEEcC--CCcEEEEeecCccc
Q 046544 609 -------------CLAPVIHCDLKPDNVLLDD--NLVAYLSDFGIAKL 641 (646)
Q Consensus 609 -------------~~~~iiHrdlk~~Nil~~~--~~~~ki~DfGla~~ 641 (646)
....++|+|++|.||++++ +..+.++||+.|..
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~ 223 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence 1135799999999999987 56788999998764
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.49 E-value=1.3e-08 Score=94.41 Aligned_cols=62 Identities=16% Similarity=0.192 Sum_probs=26.2
Q ss_pred CCCCCEEEccCCccccc----cCccccCCCCCCeEEe--ecccccCc----CchhhcCCCCCcEEEecCCcc
Q 046544 185 LTNSITIDLGGNKLNGS----IPITLSKLQKLQGLGL--DDNKLEGS----IPDSICRLTELYELELGGNKL 246 (646)
Q Consensus 185 l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L--~~N~l~~~----~~~~~~~l~~L~~L~L~~N~i 246 (646)
.++|++|+|++|.|... +...+...++|++|+| ++|.|... +...+...++|++|+|++|.+
T Consensus 92 n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 92 NNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp CSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred CCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 34444444444444322 1223333444555555 44444432 122233334455555555544
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.48 E-value=1.9e-08 Score=98.10 Aligned_cols=79 Identities=24% Similarity=0.301 Sum_probs=40.1
Q ss_pred cccceEEEccccccccc--CccccCCCCCCCEEEccCccCCCcc-cccccCCCCCCEEEccCCcCcccCCc-------cc
Q 046544 304 LKVLIGIDFSMNNFSSV--IPTEIGGLKNLEYLFLGYNRLEGSI-PDSFGDLISLKFLNLSNNNLSGAIPT-------SL 373 (646)
Q Consensus 304 l~~L~~L~ls~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~-------~~ 373 (646)
+++|+.|+|++|+|+++ +|..++.+++|+.|+|++|+|++.. -+.+..+ +|++|+|++|.+++..|. .+
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l-~L~~L~L~~Npl~~~~~~~~~y~~~il 247 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELWLDGNSLCDTFRDQSTYISAIR 247 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTS-CCSEEECTTSTTGGGCSSHHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccC-CcceEEccCCcCccccCcchhHHHHHH
Confidence 44555555555555542 2344445566666666666665431 1122222 566666666666554441 34
Q ss_pred cCCCCCCcee
Q 046544 374 EKLSYLEDLN 383 (646)
Q Consensus 374 ~~l~~L~~L~ 383 (646)
..+++|+.||
T Consensus 248 ~~~P~L~~LD 257 (267)
T 3rw6_A 248 ERFPKLLRLD 257 (267)
T ss_dssp HHCTTCCEES
T ss_pred HHCcccCeEC
Confidence 5556665554
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.47 E-value=3.5e-08 Score=91.47 Aligned_cols=92 Identities=14% Similarity=0.135 Sum_probs=51.2
Q ss_pred cccccCCCCCEEEccCC-ccccc----cCccccCCCCCCeEEeecccccCc----CchhhcCCCCCcEEEecCCccccc-
Q 046544 180 EEITNLTNSITIDLGGN-KLNGS----IPITLSKLQKLQGLGLDDNKLEGS----IPDSICRLTELYELELGGNKLFGS- 249 (646)
Q Consensus 180 ~~~~~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~i~~~- 249 (646)
..+...++|++|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|...
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34455566666666666 66432 223344456666666666666532 233344445666666666666532
Q ss_pred ---CCccccCCCCCceeec--CCCccc
Q 046544 250 ---IPACFSNLASLRILSL--SSNELT 271 (646)
Q Consensus 250 ---~~~~~~~l~~L~~L~L--~~N~l~ 271 (646)
+...+...++|++|+| ++|.|.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2334455556666666 556665
No 418
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.44 E-value=1.2e-06 Score=87.10 Aligned_cols=77 Identities=16% Similarity=0.109 Sum_probs=61.2
Q ss_pred CcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCC---CceeEEEEEecCCeeEEEEEecC
Q 046544 495 SENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHR---NLIKVISSCSNEEFKALVLEYKP 571 (646)
Q Consensus 495 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~~~~~~~~~~~~~lv~e~~~ 571 (646)
...+.++.|.++.||+++..+|+.+++|+...........+.+|++.++.+++. .+++++++. ..++||||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 446789999999999999888999999986543333346788999999999765 577887763 3689999999
Q ss_pred CCCH
Q 046544 572 HGSL 575 (646)
Q Consensus 572 ~g~L 575 (646)
|+.+
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9864
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.41 E-value=1.5e-06 Score=87.40 Aligned_cols=136 Identities=14% Similarity=0.091 Sum_probs=93.2
Q ss_pred ceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCC---CceeEEEEEe-cCCeeEEEEEecCC
Q 046544 497 NNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHR---NLIKVISSCS-NEEFKALVLEYKPH 572 (646)
Q Consensus 497 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~~~~~~~-~~~~~~lv~e~~~~ 572 (646)
.+.++.|....||+. |..+++|+.. .......+.+|+++++.+++. .+.+++.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 466888888899987 5668888742 223346788999999998653 3567777764 45668899999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 046544 573 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG-------------------------------------------- 608 (646)
Q Consensus 573 g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-------------------------------------------- 608 (646)
..+.+.... .++..+...++.++++.+..||..
T Consensus 98 ~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 887663221 123444445555555555555521
Q ss_pred -------------CCCCeEecCCCCCCEEEcC---CCc-EEEEeecCccc
Q 046544 609 -------------CLAPVIHCDLKPDNVLLDD---NLV-AYLSDFGIAKL 641 (646)
Q Consensus 609 -------------~~~~iiHrdlk~~Nil~~~---~~~-~ki~DfGla~~ 641 (646)
....++|+|+++.||+++. ++. +.|+||+.|..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1345799999999999987 344 58999998754
No 420
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.39 E-value=7.1e-08 Score=94.06 Aligned_cols=61 Identities=26% Similarity=0.374 Sum_probs=26.3
Q ss_pred CCCCCeEEeecccccC--cCchhhcCCCCCcEEEecCCcccccCCccccCCC--CCceeecCCCccc
Q 046544 209 LQKLQGLGLDDNKLEG--SIPDSICRLTELYELELGGNKLFGSIPACFSNLA--SLRILSLSSNELT 271 (646)
Q Consensus 209 l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~--~L~~L~L~~N~l~ 271 (646)
+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+.
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTG
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCc
Confidence 3444444444444443 2223344444455555555544432 1122222 4555555555544
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.39 E-value=3.9e-06 Score=82.71 Aligned_cols=135 Identities=18% Similarity=0.071 Sum_probs=96.3
Q ss_pred eecccccc-eEEEEEeC-CCcEEEEEEEeccCCchHHHHHHHHHHHHhCC-CCCceeEEEEEecCCeeEEEEEecCCCCH
Q 046544 499 LIGRGGFG-SVYKARLG-DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR-HRNLIKVISSCSNEEFKALVLEYKPHGSL 575 (646)
Q Consensus 499 ~lg~G~~g-~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~~~~~~~~~~~~~lv~e~~~~g~L 575 (646)
.+..|..| .||+.... ++..+++|+.... ....+.+|+..++.+. +--+.++++++...+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45556655 68987754 4677899986533 3456778999888774 33467888899888999999999999888
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC-----------------------------------------------
Q 046544 576 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFG----------------------------------------------- 608 (646)
Q Consensus 576 ~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~----------------------------------------------- 608 (646)
.+...... .....++.+++..+.-||..
T Consensus 108 ~~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 108 FQVLEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred cccccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 77653321 12334556666666666621
Q ss_pred --------CCCCeEecCCCCCCEEEcCCCcEEEEeecCccc
Q 046544 609 --------CLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641 (646)
Q Consensus 609 --------~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~ 641 (646)
....++|+|+.+.||++++++.+-|+||+.|..
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 011379999999999999888788999998753
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.27 E-value=3.8e-06 Score=86.52 Aligned_cols=77 Identities=9% Similarity=0.099 Sum_probs=57.5
Q ss_pred CCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCC--ceeEEEEEecC-CeeEEEEEec
Q 046544 494 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRN--LIKVISSCSNE-EFKALVLEYK 570 (646)
Q Consensus 494 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~~~~~~~~~-~~~~lv~e~~ 570 (646)
....+.++.|....+|+.+. +|..+++|+.... ..+.+|+.+++.+.... +.+++.++... +..|+||||+
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 34457789999999999876 5788999977432 25778999998886533 56777776654 6789999999
Q ss_pred CCCCHH
Q 046544 571 PHGSLE 576 (646)
Q Consensus 571 ~~g~L~ 576 (646)
+|.++.
T Consensus 117 ~G~~l~ 122 (362)
T 3ovc_A 117 QGVTLQ 122 (362)
T ss_dssp CSEETT
T ss_pred CCCCcc
Confidence 986553
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.20 E-value=1.8e-06 Score=89.03 Aligned_cols=80 Identities=6% Similarity=-0.068 Sum_probs=55.1
Q ss_pred ceee-cccccceEEEEEeC-------CCcEEEEEEEeccC---CchHHHHHHHHHHHHhCC-C--CCceeEEEEEecC--
Q 046544 497 NNLI-GRGGFGSVYKARLG-------DGMEVAVKVFNLQC---GRAFKSFAVECEMMKSIR-H--RNLIKVISSCSNE-- 560 (646)
Q Consensus 497 ~~~l-g~G~~g~V~~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-H--~niv~~~~~~~~~-- 560 (646)
.+.+ +.|....+|+.... +++.+++|+..... ......+.+|+.+++.++ + -.+.+++.++...
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3667 88889999988754 26678889765332 101245677888888774 2 3567788877655
Q ss_pred -CeeEEEEEecCCCCHH
Q 046544 561 -EFKALVLEYKPHGSLE 576 (646)
Q Consensus 561 -~~~~lv~e~~~~g~L~ 576 (646)
+..++||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 4578999999987654
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.96 E-value=2.7e-05 Score=81.36 Aligned_cols=75 Identities=16% Similarity=0.123 Sum_probs=49.6
Q ss_pred ceeecccccceEEEEEeC-CCcEEEEEEEeccCC-------chHHHHHHHHHHHHhCCC--C-CceeEEEEEecCCeeEE
Q 046544 497 NNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG-------RAFKSFAVECEMMKSIRH--R-NLIKVISSCSNEEFKAL 565 (646)
Q Consensus 497 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~H--~-niv~~~~~~~~~~~~~l 565 (646)
.+.+|.|.++.||+++.. +++.|++|....... ....++..|+++++.+.. + .+++++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 567899999999999754 568899997653211 123456778888887632 3 34466654 3445689
Q ss_pred EEEecCCC
Q 046544 566 VLEYKPHG 573 (646)
Q Consensus 566 v~e~~~~g 573 (646)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.95 E-value=4e-06 Score=75.75 Aligned_cols=84 Identities=19% Similarity=0.135 Sum_probs=61.6
Q ss_pred ccceEEEcccccccccCccccCCCCCCCEEEccCcc-CCCcccccccCC----CCCCEEEccCC-cCcccCCccccCCCC
Q 046544 305 KVLIGIDFSMNNFSSVIPTEIGGLKNLEYLFLGYNR-LEGSIPDSFGDL----ISLKFLNLSNN-NLSGAIPTSLEKLSY 378 (646)
Q Consensus 305 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N-~l~~~~p~~~~~l~~ 378 (646)
..|+.||++++.++...-..+.++++|++|+|++|. +++..-..++.+ ++|+.|+|++| +||..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 467888888888776666677788888888888885 665555556654 36888888887 477654456777888
Q ss_pred CCceeCcCCc
Q 046544 379 LEDLNLSFNK 388 (646)
Q Consensus 379 L~~L~L~~N~ 388 (646)
|++|++++.+
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 8888888765
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.87 E-value=5.7e-06 Score=74.71 Aligned_cols=83 Identities=16% Similarity=0.128 Sum_probs=48.8
Q ss_pred CCCEEEccCCccccccCccccCCCCCCeEEeeccc-ccCcCchhhcCC----CCCcEEEecCCc-ccccCCccccCCCCC
Q 046544 187 NSITIDLGGNKLNGSIPITLSKLQKLQGLGLDDNK-LEGSIPDSICRL----TELYELELGGNK-LFGSIPACFSNLASL 260 (646)
Q Consensus 187 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~L~~N~-i~~~~~~~~~~l~~L 260 (646)
.|+.||++++.++...-..+.++++|++|+|++|. |++..-..+..+ ++|++|+|++|. |+...-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45666666666554444455666677777777764 554333344443 257777777764 554444455666777
Q ss_pred ceeecCCCc
Q 046544 261 RILSLSSNE 269 (646)
Q Consensus 261 ~~L~L~~N~ 269 (646)
+.|+++++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 777777663
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.87 E-value=5.2e-05 Score=77.30 Aligned_cols=140 Identities=15% Similarity=0.112 Sum_probs=77.9
Q ss_pred ceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCC--CCCceeEEE------EEecCCeeEEEEE
Q 046544 497 NNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR--HRNLIKVIS------SCSNEEFKALVLE 568 (646)
Q Consensus 497 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--H~niv~~~~------~~~~~~~~~lv~e 568 (646)
.+.++.|..+.||+....+| .+++|+.... ......|..+++.+. .-.+++++. +....+..++|||
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EEECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 34566677899999987555 4889988742 123334555554442 112333332 1124567899999
Q ss_pred ecCCCCHH-----------HH---Hhh--CCC--C---------CCHHHH------------------------------
Q 046544 569 YKPHGSLE-----------KY---LYS--SNC--I---------LDIFQR------------------------------ 591 (646)
Q Consensus 569 ~~~~g~L~-----------~~---l~~--~~~--~---------l~~~~~------------------------------ 591 (646)
|++|..+. +. ++. ... + ..|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986431 00 110 100 0 112110
Q ss_pred -HHHHHHHHHHHHHHhc----------CCCCCeEecCCCCCCEEEcCCCcEEEEeecCccc
Q 046544 592 -LNIMIDVASALEYLHF----------GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641 (646)
Q Consensus 592 -~~i~~~i~~~l~~lH~----------~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~ 641 (646)
..+..++.+++++++. .....++|+|+++.||+++.++.+.++||+.+..
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 0111223345666652 0256899999999999998788999999998753
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.77 E-value=0.00016 Score=72.37 Aligned_cols=138 Identities=13% Similarity=0.096 Sum_probs=91.8
Q ss_pred CcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCC---CCCceeEEEEEecCCeeEEEEEecC
Q 046544 495 SENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR---HRNLIKVISSCSNEEFKALVLEYKP 571 (646)
Q Consensus 495 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~~~~~~~~~~~~~lv~e~~~ 571 (646)
...+.++.|.+..+|+... ++..+++|+.... ....+.+|++.++.+. ...+++++.++...+..++||||++
T Consensus 39 ~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~ 114 (312)
T 3jr1_A 39 KHKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN 114 (312)
T ss_dssp CEEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred eeeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence 3457789999999999886 4677889987643 3456788998888873 3668889988888888999999999
Q ss_pred CCCHH--------HH---HhhCCC---------------------CCCHHHHH---HHHH----------------HHHH
Q 046544 572 HGSLE--------KY---LYSSNC---------------------ILDIFQRL---NIMI----------------DVAS 600 (646)
Q Consensus 572 ~g~L~--------~~---l~~~~~---------------------~l~~~~~~---~i~~----------------~i~~ 600 (646)
|..+. +. ++.... .-+|.+.. ++.. ++++
T Consensus 115 G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~ 194 (312)
T 3jr1_A 115 KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQ 194 (312)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 87541 11 111110 01343221 1111 1111
Q ss_pred H-HHHHh-cCCCCCeEecCCCCCCEEEcCCCcEEEEeec
Q 046544 601 A-LEYLH-FGCLAPVIHCDLKPDNVLLDDNLVAYLSDFG 637 (646)
Q Consensus 601 ~-l~~lH-~~~~~~iiHrdlk~~Nil~~~~~~~ki~DfG 637 (646)
. ...+. ....+.++|+|+.+.|++++.++ +.|.||+
T Consensus 195 ~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 195 IVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1 12332 12246799999999999999887 8899984
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.59 E-value=0.00024 Score=70.47 Aligned_cols=78 Identities=15% Similarity=0.114 Sum_probs=56.9
Q ss_pred CCCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCC---CCceeEEEEEecCCeeEEEEEe
Q 046544 493 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRH---RNLIKVISSCSNEEFKALVLEY 569 (646)
Q Consensus 493 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H---~niv~~~~~~~~~~~~~lv~e~ 569 (646)
.....+.+|.|..+.||+.+..+|+.|.+|+...........|.+|++.|+.+.- --+++++++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 3455678899999999999999999999998765443334567889999888742 2345555542 34789999
Q ss_pred cCCCC
Q 046544 570 KPHGS 574 (646)
Q Consensus 570 ~~~g~ 574 (646)
++++.
T Consensus 92 l~~~~ 96 (288)
T 3f7w_A 92 VDERP 96 (288)
T ss_dssp CCCCC
T ss_pred ecccC
Confidence 98764
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.52 E-value=2e-05 Score=72.49 Aligned_cols=87 Identities=16% Similarity=0.190 Sum_probs=44.4
Q ss_pred CCCCEEEccCC-cccc----cCCccccCCCCCcEEEcccCccccccCccc----cCcCCCCEEEccCCCCCCCCCccccc
Q 046544 59 PNLEALLLWGN-NFSG----TIPRFIFNASKLSILELSQNSFSGFIPNTF----GNLRNLEWLNLRDNYLTSSTPELSFL 129 (646)
Q Consensus 59 ~~L~~L~L~~N-~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~----~~l~~L~~L~L~~N~l~~~~~~~~~~ 129 (646)
+.|++|+|++| +|.. .+-+.+..-+.|+.|+|++|+|.+.....+ ..-+.|++|+|++|.|...... .+.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~-ala 119 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA-RLL 119 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH-HHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH-HHH
Confidence 34555555553 4432 123344455566666666666664332222 2335566666666666532211 123
Q ss_pred ccCCCCCCCCEEECCCC
Q 046544 130 SSLSNCKSLTFIHLSDN 146 (646)
Q Consensus 130 ~~l~~l~~L~~L~Ls~N 146 (646)
..+..-+.|++|+|++|
T Consensus 120 ~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHTTTTCCCSEEECCCC
T ss_pred HHHhhCCceeEEECCCC
Confidence 34555556666666644
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.49 E-value=0.00035 Score=73.42 Aligned_cols=74 Identities=11% Similarity=0.059 Sum_probs=45.7
Q ss_pred cceeecccccceEEEEEeCCCcEEEEEEEecc----CCc-----hHHHHHHHHHHHH-hCCCCCceeEEEEEecCCeeEE
Q 046544 496 ENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQ----CGR-----AFKSFAVECEMMK-SIRHRNLIKVISSCSNEEFKAL 565 (646)
Q Consensus 496 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~----~~~-----~~~~~~~e~~~l~-~l~H~niv~~~~~~~~~~~~~l 565 (646)
..+.+|.|..+.||++.. +++.++||..... ... ....+..|+..+. ......+++++.+. .+..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 357789999999999965 5678999943211 000 2223333433222 22334567777665 466789
Q ss_pred EEEec-CC
Q 046544 566 VLEYK-PH 572 (646)
Q Consensus 566 v~e~~-~~ 572 (646)
||||+ +|
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
No 432
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.42 E-value=0.00021 Score=61.40 Aligned_cols=57 Identities=28% Similarity=0.350 Sum_probs=29.2
Q ss_pred EEEccCccCC-CcccccccCCCCCCEEEccCCcCcccCCccccCCCCCCceeCcCCccee
Q 046544 333 YLFLGYNRLE-GSIPDSFGDLISLKFLNLSNNNLSGAIPTSLEKLSYLEDLNLSFNKLEG 391 (646)
Q Consensus 333 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 391 (646)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|++.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 4555555554 12332221 245666666666665555555666666555555554444
No 433
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.23 E-value=0.0011 Score=66.88 Aligned_cols=156 Identities=16% Similarity=0.120 Sum_probs=84.0
Q ss_pred ccHHHHHHHhCCCCc-----ceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCC--ceeEE
Q 046544 482 FSYLELCRATNGFSE-----NNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRN--LIKVI 554 (646)
Q Consensus 482 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~~~ 554 (646)
.+.+++......|.. .+.++.|....+|+....+| .+++|+..... ..+.+..|..+++.+.... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 334455555555543 34567788889999987655 57889886521 1234455777766653212 23333
Q ss_pred EE------EecCCeeEEEEEecCCCCHHH----H----------Hhh----CCCC----CC---HHHHHH----------
Q 046544 555 SS------CSNEEFKALVLEYKPHGSLEK----Y----------LYS----SNCI----LD---IFQRLN---------- 593 (646)
Q Consensus 555 ~~------~~~~~~~~lv~e~~~~g~L~~----~----------l~~----~~~~----l~---~~~~~~---------- 593 (646)
.. ....+..+++|+|++|..+.. . ++. .... .. |.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 122356789999999864310 0 111 0000 01 111000
Q ss_pred --HHHHHHHHHHHHhc----CCCCCeEecCCCCCCEEEcCCCcEEEEeecCcc
Q 046544 594 --IMIDVASALEYLHF----GCLAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 640 (646)
Q Consensus 594 --i~~~i~~~l~~lH~----~~~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~ 640 (646)
+...+.+.+++++. ....+++|+|+.+.||++++++.+.++||+.+.
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 00113334455441 123578999999999999987667899998765
No 434
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.18 E-value=0.0025 Score=64.46 Aligned_cols=139 Identities=12% Similarity=0.080 Sum_probs=71.6
Q ss_pred eeecccccce-EEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCC--CCCceeEEEEEecCCeeEEEEEecCCCC
Q 046544 498 NLIGRGGFGS-VYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR--HRNLIKVISSCSNEEFKALVLEYKPHGS 574 (646)
Q Consensus 498 ~~lg~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--H~niv~~~~~~~~~~~~~lv~e~~~~g~ 574 (646)
+.++.|.... +|+....+|+.+++|....... ..+..|+.+++.+. .-.+.+++.+....+ +++||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4455555444 6677654467777775543221 22334666665553 223556776644444 68999997766
Q ss_pred HHHHHhhCC-------------------------CCCCHHHHH-------H-H------------HHHHHHHHHHHh---
Q 046544 575 LEKYLYSSN-------------------------CILDIFQRL-------N-I------------MIDVASALEYLH--- 606 (646)
Q Consensus 575 L~~~l~~~~-------------------------~~l~~~~~~-------~-i------------~~~i~~~l~~lH--- 606 (646)
+.+.+.... ...+..... . + ...+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 654432110 011111100 0 0 001111222221
Q ss_pred cCCCCCeEecCCCCCCEEEcCC----CcEEEEeecCccc
Q 046544 607 FGCLAPVIHCDLKPDNVLLDDN----LVAYLSDFGIAKL 641 (646)
Q Consensus 607 ~~~~~~iiHrdlk~~Nil~~~~----~~~ki~DfGla~~ 641 (646)
......++|+|+.+.||+++.+ +.+.|+||+.|..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1125679999999999999874 6899999998764
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.17 E-value=5.6e-05 Score=69.56 Aligned_cols=13 Identities=8% Similarity=0.010 Sum_probs=6.0
Q ss_pred CCCCcEEEecCCc
Q 046544 233 LTELYELELGGNK 245 (646)
Q Consensus 233 l~~L~~L~L~~N~ 245 (646)
-+.|+.|+++.|.
T Consensus 156 N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 156 NESLLRVGISFAS 168 (197)
T ss_dssp CSSCCEEECCCCC
T ss_pred CCCcCeEeccCCC
Confidence 3444445444443
No 436
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.07 E-value=0.0012 Score=65.76 Aligned_cols=74 Identities=11% Similarity=0.087 Sum_probs=44.8
Q ss_pred CCcceeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCc-eeEEEEEecCCeeEEEEEec-C
Q 046544 494 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNL-IKVISSCSNEEFKALVLEYK-P 571 (646)
Q Consensus 494 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~~~~~~~~~~~~~lv~e~~-~ 571 (646)
+...+.++.|....+|+. ..+++|+....... .....+|+.+++.+....+ .+++++. .+.-++|+||+ +
T Consensus 20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~ 91 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAG 91 (301)
T ss_dssp CCSCEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTT
T ss_pred ccceeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCC
Confidence 344678999999999998 45888887643221 1122457777766632222 4555443 33357899999 6
Q ss_pred CCCH
Q 046544 572 HGSL 575 (646)
Q Consensus 572 ~g~L 575 (646)
|.++
T Consensus 92 g~~l 95 (301)
T 3dxq_A 92 AQTM 95 (301)
T ss_dssp CEEC
T ss_pred CccC
Confidence 6444
No 437
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.05 E-value=0.0009 Score=57.41 Aligned_cols=57 Identities=16% Similarity=0.189 Sum_probs=36.0
Q ss_pred EEEccCCccc-ccCCccccCCCCCcEEEcccCccccccCccccCcCCCCEEEccCCCCCC
Q 046544 63 ALLLWGNNFS-GTIPRFIFNASKLSILELSQNSFSGFIPNTFGNLRNLEWLNLRDNYLTS 121 (646)
Q Consensus 63 ~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 121 (646)
.++.+++.++ ..+|..+ .++|++|+|++|+|+.+.++.|..+++|++|+|++|.+.-
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 4555555554 1233322 2357777777777777777777777777777777777653
No 438
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.01 E-value=0.0033 Score=63.32 Aligned_cols=75 Identities=11% Similarity=0.059 Sum_probs=48.5
Q ss_pred eeecccccceEEEEEeCCCcEEEEEEEeccCCchHHHHHHHHHHHHhCCCC--CceeEEEE-----EecCCeeEEEEEec
Q 046544 498 NLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHR--NLIKVISS-----CSNEEFKALVLEYK 570 (646)
Q Consensus 498 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~--niv~~~~~-----~~~~~~~~lv~e~~ 570 (646)
..++ |....||+....+|+.+++|...... .....+..|..+++.++.. .+++++.. ....+..++||||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 4566 88889998877677789999986332 1234566677777766322 23444432 12245668899999
Q ss_pred CCCC
Q 046544 571 PHGS 574 (646)
Q Consensus 571 ~~g~ 574 (646)
+|..
T Consensus 110 ~G~~ 113 (328)
T 1zyl_A 110 GGRQ 113 (328)
T ss_dssp CCEE
T ss_pred CCCC
Confidence 8753
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.80 E-value=0.0035 Score=64.42 Aligned_cols=140 Identities=14% Similarity=0.149 Sum_probs=80.3
Q ss_pred ceeecccccceEEEEEeC--------CCcEEEEEEEeccCCchHHHHHHHHHHHHhCC-CCCceeEEEEEecCCeeEEEE
Q 046544 497 NNLIGRGGFGSVYKARLG--------DGMEVAVKVFNLQCGRAFKSFAVECEMMKSIR-HRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 497 ~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~~~~~~~~~~~~~lv~ 567 (646)
.+.+..|-...+|++... +++.|++|+..... .......+|.++++.+. +.-..++++++.. .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 356777888899998864 24789999864322 23455668999888773 3223566666543 2999
Q ss_pred EecCCCCHHH--------------HH---hhCC----CCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 046544 568 EYKPHGSLEK--------------YL---YSSN----CILD--IFQRLNIMIDVAS-------------------ALEYL 605 (646)
Q Consensus 568 e~~~~g~L~~--------------~l---~~~~----~~l~--~~~~~~i~~~i~~-------------------~l~~l 605 (646)
||++|.++.. .+ +... .... +.+..++..++.. .+.++
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 9999854421 00 1111 1111 2333334333211 22333
Q ss_pred h-----cCCCCCeEecCCCCCCEEEcCC----CcEEEEeecCccc
Q 046544 606 H-----FGCLAPVIHCDLKPDNVLLDDN----LVAYLSDFGIAKL 641 (646)
Q Consensus 606 H-----~~~~~~iiHrdlk~~Nil~~~~----~~~ki~DfGla~~ 641 (646)
. ......++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 1223468999999999999876 7899999988753
No 440
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.73 E-value=0.0033 Score=65.95 Aligned_cols=72 Identities=19% Similarity=0.221 Sum_probs=48.7
Q ss_pred ceeecccccceEEEEEeCC--------CcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCc-eeEEEEEecCCeeEEEE
Q 046544 497 NNLIGRGGFGSVYKARLGD--------GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNL-IKVISSCSNEEFKALVL 567 (646)
Q Consensus 497 ~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~~~~~~~~~~~~~lv~ 567 (646)
.+.++.|....||++...+ ++.|++|+..... ....+.+|..+++.+...++ +++++.+. + .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEE
Confidence 4668888889999998653 5789999884321 12455678888887743333 56666553 2 3899
Q ss_pred EecCCCC
Q 046544 568 EYKPHGS 574 (646)
Q Consensus 568 e~~~~g~ 574 (646)
||++|.+
T Consensus 152 e~l~G~~ 158 (429)
T 1nw1_A 152 EYIPSRP 158 (429)
T ss_dssp CCCCEEE
T ss_pred EEeCCcc
Confidence 9998743
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.46 E-value=0.011 Score=62.49 Aligned_cols=74 Identities=11% Similarity=0.096 Sum_probs=47.8
Q ss_pred ceeecccccceEEEEEeCC-CcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCCc-eeEEEEEecCCeeEEEEEecCCCC
Q 046544 497 NNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRNL-IKVISSCSNEEFKALVLEYKPHGS 574 (646)
Q Consensus 497 ~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~~~~~~~~~~~~~lv~e~~~~g~ 574 (646)
.+.|+.|-...+|++...+ +..|++|+........ -...+|..+++.+...++ +++++++. + ..||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 4678888889999998765 5788899875432211 112478888888864444 56777662 2 25999998744
Q ss_pred H
Q 046544 575 L 575 (646)
Q Consensus 575 L 575 (646)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 3
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.27 E-value=0.0062 Score=62.51 Aligned_cols=73 Identities=11% Similarity=0.169 Sum_probs=43.3
Q ss_pred ceeecccccceEEEEEeCC---------CcEEEEEEEeccCCchHHHHHHHHHHHHhCCCCC-ceeEEEEEecCCeeEEE
Q 046544 497 NNLIGRGGFGSVYKARLGD---------GMEVAVKVFNLQCGRAFKSFAVECEMMKSIRHRN-LIKVISSCSNEEFKALV 566 (646)
Q Consensus 497 ~~~lg~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~n-iv~~~~~~~~~~~~~lv 566 (646)
.+.++.|....+|+....+ +..+++|+...... .......|.++++.+...+ ++++++.. . -++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence 3567788888999988653 26788888754322 1112356777777764323 44666544 2 2689
Q ss_pred EEecCCCC
Q 046544 567 LEYKPHGS 574 (646)
Q Consensus 567 ~e~~~~g~ 574 (646)
|||++|..
T Consensus 113 ~e~i~G~~ 120 (369)
T 3c5i_A 113 EEWLYGDP 120 (369)
T ss_dssp EECCCSEE
T ss_pred EEEecCCc
Confidence 99998854
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.25 E-value=0.039 Score=55.77 Aligned_cols=32 Identities=25% Similarity=0.399 Sum_probs=27.6
Q ss_pred CCCeEecCCCCCCEEEcCCCcEEEEeecCccc
Q 046544 610 LAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 641 (646)
Q Consensus 610 ~~~iiHrdlk~~Nil~~~~~~~ki~DfGla~~ 641 (646)
...++|+|+.+.||++++++.+.++||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35689999999999999888899999987653
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.58 E-value=0.036 Score=57.11 Aligned_cols=139 Identities=16% Similarity=0.157 Sum_probs=79.5
Q ss_pred eeecccccceEEEEEeCC--------CcEEEEEEEeccCCc-----------hH-------HHHHHHHHHHHhCC-CCCc
Q 046544 498 NLIGRGGFGSVYKARLGD--------GMEVAVKVFNLQCGR-----------AF-------KSFAVECEMMKSIR-HRNL 550 (646)
Q Consensus 498 ~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~-----------~~-------~~~~~e~~~l~~l~-H~ni 550 (646)
+.+..|-...+|++...+ ++.|.+++.....+. +. +....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 556667788999988653 367888887543221 01 12235888877773 4345
Q ss_pred eeEEEEEecCCeeEEEEEecCCCCHHH--H------------H---hhCC----CCCC--HHHHHHHHHHHH--------
Q 046544 551 IKVISSCSNEEFKALVLEYKPHGSLEK--Y------------L---YSSN----CILD--IFQRLNIMIDVA-------- 599 (646)
Q Consensus 551 v~~~~~~~~~~~~~lv~e~~~~g~L~~--~------------l---~~~~----~~l~--~~~~~~i~~~i~-------- 599 (646)
.++++++.. .+|+||++|.++.. + + +... .... +....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 677776542 28999999754421 0 0 1111 1112 112222332221
Q ss_pred --------------HHHH----HHh-cCCCCCeEecCCCCCCEEEcCC------CcEEEEeecCcc
Q 046544 600 --------------SALE----YLH-FGCLAPVIHCDLKPDNVLLDDN------LVAYLSDFGIAK 640 (646)
Q Consensus 600 --------------~~l~----~lH-~~~~~~iiHrdlk~~Nil~~~~------~~~ki~DfGla~ 640 (646)
+-+. ++. ......++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 222 1224468999999999999876 789999998775
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.80 E-value=0.22 Score=51.74 Aligned_cols=73 Identities=11% Similarity=0.193 Sum_probs=46.7
Q ss_pred ceeecccccceEEEEEeCC--------CcEEEEEEEeccCCchHHHHHHHHHHHHhCC-CCCceeEEEEEecCCeeEEEE
Q 046544 497 NNLIGRGGFGSVYKARLGD--------GMEVAVKVFNLQCGRAFKSFAVECEMMKSIR-HRNLIKVISSCSNEEFKALVL 567 (646)
Q Consensus 497 ~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~~~~~~~~~~~~~lv~ 567 (646)
.+.+..|-...+|+....+ ++.|++|+....... .-+..+|.++++.+. +.-..++++.+ . -+.||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEE
Confidence 3567778888999998653 578999986543221 112346888777763 22245566533 2 26899
Q ss_pred EecCCCC
Q 046544 568 EYKPHGS 574 (646)
Q Consensus 568 e~~~~g~ 574 (646)
||++|.+
T Consensus 150 efI~G~~ 156 (424)
T 3mes_A 150 EFIDGEP 156 (424)
T ss_dssp ECCCSEE
T ss_pred EEeCCcc
Confidence 9999865
No 446
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=88.43 E-value=0.49 Score=31.14 Aligned_cols=6 Identities=33% Similarity=0.711 Sum_probs=2.2
Q ss_pred cchhhh
Q 046544 437 LLLGIV 442 (646)
Q Consensus 437 ~~~~i~ 442 (646)
++.+++
T Consensus 13 IA~gVV 18 (44)
T 2ks1_B 13 IATGMV 18 (44)
T ss_dssp STHHHH
T ss_pred EEeehh
Confidence 333333
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.14 E-value=0.4 Score=49.48 Aligned_cols=30 Identities=27% Similarity=0.373 Sum_probs=24.7
Q ss_pred CeEecCCCCCCEEE------cCCCcEEEEeecCccc
Q 046544 612 PVIHCDLKPDNVLL------DDNLVAYLSDFGIAKL 641 (646)
Q Consensus 612 ~iiHrdlk~~Nil~------~~~~~~ki~DfGla~~ 641 (646)
.++|+|+.+.||++ +++..++++||-.|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 3467799999987753
No 448
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=80.80 E-value=1.1 Score=29.45 Aligned_cols=7 Identities=14% Similarity=0.420 Sum_probs=2.7
Q ss_pred chhhhhh
Q 046544 438 LLGIVLP 444 (646)
Q Consensus 438 ~~~i~~~ 444 (646)
++++++.
T Consensus 14 Ia~~vVG 20 (44)
T 2jwa_A 14 IISAVVG 20 (44)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 3333343
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=80.61 E-value=0.17 Score=53.42 Aligned_cols=60 Identities=8% Similarity=0.045 Sum_probs=17.0
Q ss_pred cceeecccccceEEEEEeCC-CcEEEE------EEEeccC--CchHHHHHHHHHHHHhCCCCCceeEEEEEe
Q 046544 496 ENNLIGRGGFGSVYKARLGD-GMEVAV------KVFNLQC--GRAFKSFAVECEMMKSIRHRNLIKVISSCS 558 (646)
Q Consensus 496 ~~~~lg~G~~g~V~~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~~~~~~~ 558 (646)
..+.+| ||+||+|.+.. ..+||+ |..+... ......+.+|+.+++..+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345566 99999998754 467888 6554321 223456888999999999999999887654
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=76.90 E-value=8.1 Score=35.56 Aligned_cols=87 Identities=13% Similarity=0.127 Sum_probs=62.0
Q ss_pred CCCCCceeEEEEEecCCeeEEEEEecCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHH-HHhcCCCCCeEecCCCCCCE
Q 046544 545 IRHRNLIKVISSCSNEEFKALVLEYKPHGSLEKYLYSSNCILDIFQRLNIMIDVASALE-YLHFGCLAPVIHCDLKPDNV 623 (646)
Q Consensus 545 l~H~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~-~lH~~~~~~iiHrdlk~~Ni 623 (646)
-.||+. -..+-.+++...+.++.-+++.=...++ ..+..++++++..++.... +++ .-+|--+.|+|+
T Consensus 47 ~~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~----~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL 115 (219)
T 4ano_A 47 EVDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR----KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENL 115 (219)
T ss_dssp GSCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH----TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGE
T ss_pred ccCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH----hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceE
Confidence 368888 4455567777777777654443333343 3567888888888877666 444 447888999999
Q ss_pred EEcCCCcEEEEeecCcccc
Q 046544 624 LLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 624 l~~~~~~~ki~DfGla~~~ 642 (646)
+++.++.+++.-.|+-..+
T Consensus 116 ~f~~~~~p~i~hRGi~~~l 134 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKESL 134 (219)
T ss_dssp EECTTCCEEESCCEETTTB
T ss_pred EEeCCCcEEEEEcCCcccC
Confidence 9999999999999975544
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=74.96 E-value=5.5 Score=36.58 Aligned_cols=87 Identities=8% Similarity=0.144 Sum_probs=62.0
Q ss_pred CCCCCceeEEEEEecCCeeEEEEEecCCC-CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCE
Q 046544 545 IRHRNLIKVISSCSNEEFKALVLEYKPHG-SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCLAPVIHCDLKPDNV 623 (646)
Q Consensus 545 l~H~niv~~~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Ni 623 (646)
-.||+.+.. .+-..++.+.+.++.-+.+ ++.. ++ ..+....++++..|+...++++ . -+|--+.|+|+
T Consensus 42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik----~~~~~eKlr~l~ni~~l~~~~~---~--r~tf~L~P~NL 110 (215)
T 4ann_A 42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK----SFTKNEKLRYLLNIKNLEEVNR---T--RYTFVLAPDEL 110 (215)
T ss_dssp SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG----GSCHHHHHHHHHHGGGGGGGGG---S--SEECCCSGGGE
T ss_pred ccCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH----hcCHHHHHHHHHHHHHHHHHhc---C--ceEEEEecceE
Confidence 368888876 4666666666666544322 2222 32 3567888999999988887666 2 36888999999
Q ss_pred EEcCCCcEEEEeecCcccc
Q 046544 624 LLDDNLVAYLSDFGIAKLL 642 (646)
Q Consensus 624 l~~~~~~~ki~DfGla~~~ 642 (646)
+++.++.+++.-.|+-..+
T Consensus 111 ~f~~~~~p~i~~RGik~~l 129 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVV 129 (215)
T ss_dssp EECTTSCEEESCCEETTTB
T ss_pred EEcCCCCEEEEEccCccCC
Confidence 9999999999999875443
No 452
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=61.75 E-value=5.1 Score=25.38 Aligned_cols=10 Identities=10% Similarity=0.361 Sum_probs=5.2
Q ss_pred cchhhhhhHH
Q 046544 437 LLLGIVLPLS 446 (646)
Q Consensus 437 ~~~~i~~~~~ 446 (646)
.++++++...
T Consensus 12 aIAGiVvG~v 21 (38)
T 2k1k_A 12 EIVAVIFGLL 21 (38)
T ss_dssp HHHHHHHHHH
T ss_pred ceeeeehHHH
Confidence 4556555433
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=58.98 E-value=21 Score=28.15 Aligned_cols=44 Identities=14% Similarity=0.070 Sum_probs=21.0
Q ss_pred ccccCccccCCCCCCCEEEccCccCCCcccccccCCCCCCEEEcc
Q 046544 317 FSSVIPTEIGGLKNLEYLFLGYNRLEGSIPDSFGDLISLKFLNLS 361 (646)
Q Consensus 317 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 361 (646)
++.+...+|.++.+|+.+.+-.+ ++.+...+|.++.+|+.+.+.
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 33444455555555555555443 222444455555555555444
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=54.23 E-value=31 Score=27.15 Aligned_cols=46 Identities=15% Similarity=0.102 Sum_probs=24.8
Q ss_pred cccccCccccCCCCCCeEEeecccccCcCchhhcCCCCCcEEEecCC
Q 046544 198 LNGSIPITLSKLQKLQGLGLDDNKLEGSIPDSICRLTELYELELGGN 244 (646)
Q Consensus 198 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 244 (646)
++.+...+|.++.+|+.+.+-.+ ++.+...+|.++.+|+.+.+...
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 33444455556666666655554 23345555666666666665543
No 455
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=34.88 E-value=31 Score=22.57 Aligned_cols=29 Identities=14% Similarity=0.067 Sum_probs=19.0
Q ss_pred hhhhhHHHHHHHHHHhhhheeccCCCCCC
Q 046544 440 GIVLPLSTTLLIVVIWLILRYRKRGKQPS 468 (646)
Q Consensus 440 ~i~~~~~~~~~~~~~~l~~~~r~r~~~~~ 468 (646)
+..+.+++++++++...++.+.||++++.
T Consensus 13 A~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 13 AAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred EEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 33444445555566678888999988765
No 456
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=29.57 E-value=44 Score=23.79 Aligned_cols=6 Identities=33% Similarity=0.545 Sum_probs=2.3
Q ss_pred eccCCC
Q 046544 460 YRKRGK 465 (646)
Q Consensus 460 ~r~r~~ 465 (646)
+++|++
T Consensus 34 crhRrr 39 (70)
T 2klu_A 34 SRHRRR 39 (70)
T ss_dssp SSCCSS
T ss_pred HHHHHH
Confidence 443333
Done!