BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046549
MQDPATFNPMKPHFPESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGAL
RNIPIGGGTRKSNTKKRQKPDPDPSRSNPTRKSQETANTQSMLQAAATTSTSSQEPAVTL
PGAVARESGTEHDPRRLYGLPLDQDHKMLDITGSFSSLLASNGGLGSVLDGITPNGSGFK
MVQMGGFGENFGSDQSLDLISVRGSGSQNQGNNNGGESFMQSGNNDSSCWSGGSNGWPDL
AIYTPSSNFQ

High Scoring Gene Products

Symbol, full name Information P value
OBP1
AT3G50410
protein from Arabidopsis thaliana 2.5e-32
DOF1
AT1G51700
protein from Arabidopsis thaliana 1.6e-31
DOF2
AT3G21270
protein from Arabidopsis thaliana 8.8e-31
SCAP1
AT5G65590
protein from Arabidopsis thaliana 4.7e-29
AT1G64620 protein from Arabidopsis thaliana 8.4e-28
OBP4
AT5G60850
protein from Arabidopsis thaliana 1.3e-27
DAG2
AT2G46590
protein from Arabidopsis thaliana 9.4e-27
DOF2.4
AT2G37590
protein from Arabidopsis thaliana 1.2e-26
OBP2
AT1G07640
protein from Arabidopsis thaliana 1.5e-26
AT2G28810 protein from Arabidopsis thaliana 1.5e-26
AT5G02460 protein from Arabidopsis thaliana 1.5e-26
AT1G47655 protein from Arabidopsis thaliana 4.0e-26
HCA2
AT5G62940
protein from Arabidopsis thaliana 4.0e-26
DOF4.7
AT4G38000
protein from Arabidopsis thaliana 8.4e-26
AT5G66940 protein from Arabidopsis thaliana 1.8e-25
AT1G28310 protein from Arabidopsis thaliana 2.9e-25
DOF6
AT3G45610
protein from Arabidopsis thaliana 4.6e-25
AT4G24060 protein from Arabidopsis thaliana 4.6e-25
TMO6
AT5G60200
protein from Arabidopsis thaliana 2.0e-24
DAG1
AT3G61850
protein from Arabidopsis thaliana 8.7e-24
DOF4.1
AT4G00940
protein from Arabidopsis thaliana 8.7e-24
AT3G52440 protein from Arabidopsis thaliana 7.8e-23
AT1G21340 protein from Arabidopsis thaliana 1.0e-22
AT2G28510 protein from Arabidopsis thaliana 1.0e-22
DOF4.4
AT4G21050
protein from Arabidopsis thaliana 2.6e-22
DOF4.5
AT4G21080
protein from Arabidopsis thaliana 9.0e-22
DOF4.3
AT4G21040
protein from Arabidopsis thaliana 1.9e-21
AT1G69570 protein from Arabidopsis thaliana 2.5e-21
AT1G29160 protein from Arabidopsis thaliana 3.0e-21
AT2G34140 protein from Arabidopsis thaliana 3.9e-21
CDF3
AT3G47500
protein from Arabidopsis thaliana 2.8e-20
CDF2
AT5G39660
protein from Arabidopsis thaliana 3.0e-20
CDF1
AT5G62430
protein from Arabidopsis thaliana 4.4e-20
ATDOF4.2
AT4G21030
protein from Arabidopsis thaliana 3.8e-14

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046549
        (250 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2074850 - symbol:OBP1 "OBF binding protein 1" ...   288  2.5e-32   3
TAIR|locus:2017567 - symbol:DOF1 "DOF zinc finger protein...   346  1.6e-31   1
TAIR|locus:2094746 - symbol:DOF2 "DOF zinc finger protein...   339  8.8e-31   1
TAIR|locus:2155755 - symbol:AT5G65590 species:3702 "Arabi...   299  4.7e-29   2
TAIR|locus:2019499 - symbol:AT1G64620 species:3702 "Arabi...   289  8.4e-28   2
TAIR|locus:2159275 - symbol:OBP4 "OBF binding protein 4" ...   309  1.3e-27   1
TAIR|locus:2039959 - symbol:DAG2 "DOF AFFECTING GERMINATI...   265  9.4e-27   2
TAIR|locus:2040746 - symbol:DOF2.4 "DNA binding with one ...   300  1.2e-26   1
TAIR|locus:2026595 - symbol:OBP2 species:3702 "Arabidopsi...   299  1.5e-26   1
TAIR|locus:2053175 - symbol:AT2G28810 species:3702 "Arabi...   299  1.5e-26   1
TAIR|locus:2181773 - symbol:AT5G02460 species:3702 "Arabi...   299  1.5e-26   1
TAIR|locus:505006172 - symbol:AT1G47655 species:3702 "Ara...   295  4.0e-26   1
TAIR|locus:2170753 - symbol:HCA2 "HIGH CAMBIAL ACTIVITY2"...   295  4.0e-26   1
TAIR|locus:2121041 - symbol:DOF4.7 "DNA binding with one ...   292  8.4e-26   1
TAIR|locus:2158078 - symbol:AT5G66940 species:3702 "Arabi...   289  1.8e-25   1
TAIR|locus:2032153 - symbol:AT1G28310 species:3702 "Arabi...   287  2.9e-25   1
TAIR|locus:2085697 - symbol:DOF6 "DOF transcription facto...   285  4.6e-25   1
TAIR|locus:2134981 - symbol:AT4G24060 species:3702 "Arabi...   285  4.6e-25   1
TAIR|locus:2144030 - symbol:TMO6 "TARGET OF MONOPTEROS 6"...   279  2.0e-24   1
TAIR|locus:2079492 - symbol:DAG1 "dof affecting germinati...   273  8.7e-24   1
TAIR|locus:2134658 - symbol:AT4G00940 species:3702 "Arabi...   273  8.7e-24   1
TAIR|locus:2079954 - symbol:AT3G52440 species:3702 "Arabi...   264  7.8e-23   1
TAIR|locus:2027027 - symbol:AT1G21340 species:3702 "Arabi...   263  1.0e-22   1
TAIR|locus:2056588 - symbol:AT2G28510 species:3702 "Arabi...   263  1.0e-22   1
TAIR|locus:2133079 - symbol:DOF4.4 "DNA-binding with One ...   259  2.6e-22   1
TAIR|locus:2127353 - symbol:DOF4.5 "DNA-binding with One ...   254  9.0e-22   1
TAIR|locus:2133064 - symbol:DOF4.3 "AT4G21040" species:37...   251  1.9e-21   1
TAIR|locus:2007151 - symbol:AT1G69570 species:3702 "Arabi...   252  2.5e-21   1
TAIR|locus:2030006 - symbol:AT1G29160 species:3702 "Arabi...   249  3.0e-21   1
TAIR|locus:2055506 - symbol:AT2G34140 species:3702 "Arabi...   248  3.9e-21   1
TAIR|locus:2079152 - symbol:CDF3 "cycling DOF factor 3" s...   245  2.8e-20   1
TAIR|locus:2164860 - symbol:CDF2 "cycling DOF factor 2" s...   245  3.0e-20   1
TAIR|locus:2154079 - symbol:CDF1 "AT5G62430" species:3702...   238  4.4e-20   1
TAIR|locus:2133149 - symbol:ATDOF4.2 "AT4G21030" species:...   182  3.8e-14   1


>TAIR|locus:2074850 [details] [associations]
            symbol:OBP1 "OBF binding protein 1" species:3702
            "Arabidopsis thaliana" [GO:0003677 "DNA binding"
            evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0009751
            "response to salicylic acid stimulus" evidence=IEP] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0042545 "cell wall modification"
            evidence=IMP] [GO:0045787 "positive regulation of cell cycle"
            evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
            PROSITE:PS50884 GO:GO:0005634 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0009733 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
            GO:GO:0009751 GO:GO:0045787 GO:GO:0042545 EMBL:AL132976
            HOGENOM:HOG000005865 EMBL:X89192 IPI:IPI00523996 PIR:T46072
            RefSeq:NP_190610.1 UniGene:At.20758 IntAct:Q39088 PRIDE:Q39088
            EnsemblPlants:AT3G50410.1 GeneID:824205 KEGG:ath:AT3G50410
            GeneFarm:4389 TAIR:At3g50410 eggNOG:NOG293819 InParanoid:Q39088
            OMA:EPRRIAM PhylomeDB:Q39088 Genevestigator:Q39088
            GermOnline:AT3G50410 Uniprot:Q39088
        Length = 253

 Score = 288 (106.4 bits), Expect = 2.5e-32, Sum P(3) = 2.5e-32
 Identities = 47/66 (71%), Positives = 54/66 (81%)

Query:    12 PHFPESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRK 71
             P   + EQL CPRC+S+NTKFCYYNNYN SQPRHFCK CRRYWT GG LR++P+GGGTRK
Sbjct:    22 PISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRK 81

Query:    72 SNTKKR 77
             S  + R
Sbjct:    82 SAKRSR 87

 Score = 49 (22.3 bits), Expect = 2.5e-32, Sum P(3) = 2.5e-32
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query:   231 SGGSNGWPDLAIYTPSSNFQ 250
             SG    WPDL+I TP ++ +
Sbjct:   234 SGEYFAWPDLSITTPGNSLK 253

 Score = 42 (19.8 bits), Expect = 2.5e-32, Sum P(3) = 2.5e-32
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query:   175 NGSGFKMVQMGGFGENFGS 193
             +GSG  ++ +GGFG   GS
Sbjct:   160 HGSG-SVIGIGGFGIGLGS 177


>TAIR|locus:2017567 [details] [associations]
            symbol:DOF1 "DOF zinc finger protein 1" species:3702
            "Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0010200
            "response to chitin" evidence=IEP] InterPro:IPR003851 Pfam:PF02701
            ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
            EMBL:AC025294 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
            GO:GO:0010200 HOGENOM:HOG000005865 EMBL:AB017564 IPI:IPI00532555
            PIR:T52044 RefSeq:NP_175581.1 UniGene:At.256 PRIDE:O82155
            EnsemblPlants:AT1G51700.1 GeneID:841595 KEGG:ath:AT1G51700
            GeneFarm:4400 TAIR:At1g51700 eggNOG:NOG318115 InParanoid:O82155
            OMA:LASNMQM PhylomeDB:O82155 ProtClustDB:CLSN2679425
            Genevestigator:O82155 GermOnline:AT1G51700 Uniprot:O82155
        Length = 194

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 60/80 (75%), Positives = 65/80 (81%)

Query:    11 KPHFPESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTR 70
             +P  PE EQLKCPRC+S NTKFCYYNNYNLSQPRHFCKNCRRYWT+GGALRNIP+GGGTR
Sbjct:    24 QPELPEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83

Query:    71 KSNTKKRQKPDPDPSRSNPT 90
             KSN  KR    P  +  N T
Sbjct:    84 KSN--KRSGSSPSSNLKNQT 101


>TAIR|locus:2094746 [details] [associations]
            symbol:DOF2 "DOF zinc finger protein 2" species:3702
            "Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0019344
            "cysteine biosynthetic process" evidence=RCA] InterPro:IPR003851
            Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
            GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
            GO:GO:0003677 EMBL:AB023045 GO:GO:0008270 GO:GO:0003700
            GO:GO:0006351 HOGENOM:HOG000005865 ProtClustDB:CLSN2679425
            EMBL:AB017565 EMBL:AY045847 EMBL:AY150391 IPI:IPI00526237
            PIR:T52045 RefSeq:NP_188764.1 UniGene:At.257
            EnsemblPlants:AT3G21270.1 GeneID:821681 KEGG:ath:AT3G21270
            GeneFarm:4401 TAIR:At3g21270 eggNOG:NOG280617 InParanoid:Q94AR6
            OMA:GMEIGGS PhylomeDB:Q94AR6 Genevestigator:Q94AR6
            GermOnline:AT3G21270 Uniprot:Q94AR6
        Length = 204

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 62/103 (60%), Positives = 74/103 (71%)

Query:     1 MQDPATF---------NPMKPHFPESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCR 51
             MQDPA +            +P F E EQLKCPRC+S NTKFCYYNNYNLSQPRHFCK+CR
Sbjct:     1 MQDPAAYYQTMMAKQQQQQQPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCR 60

Query:    52 RYWTRGGALRNIPIGGGTRKSNTKKRQKPDPDPSRSNPTRKSQ 94
             RYWT+GGALRN+P+GGG+RK+ TK+        S S+P+  SQ
Sbjct:    61 RYWTKGGALRNVPVGGGSRKNATKR--STSSSSSASSPSNSSQ 101


>TAIR|locus:2155755 [details] [associations]
            symbol:AT5G65590 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] InterPro:IPR003851
            Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
            EMBL:AB026639 HOGENOM:HOG000090627 EMBL:BT014981 EMBL:BT015717
            IPI:IPI00521298 RefSeq:NP_201362.1 UniGene:At.28900
            EnsemblPlants:AT5G65590.1 GeneID:836685 KEGG:ath:AT5G65590
            GeneFarm:4479 TAIR:At5g65590 eggNOG:NOG306856 InParanoid:Q9LSL6
            OMA:SGRENTP PhylomeDB:Q9LSL6 ProtClustDB:CLSN2686628
            Genevestigator:Q9LSL6 GermOnline:AT5G65590 Uniprot:Q9LSL6
        Length = 316

 Score = 299 (110.3 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
 Identities = 55/80 (68%), Positives = 62/80 (77%)

Query:    16 ESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTK 75
             + + LKCPRC S NTKFCYYNNY+LSQPRHFCK+CRRYWTRGGALRN+PIGGG RK  TK
Sbjct:    37 DQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRK--TK 94

Query:    76 KRQKPDPD----PSRSNPTR 91
             K  KP+      PS S+  R
Sbjct:    95 KSIKPNSSMNTLPSSSSSQR 114

 Score = 39 (18.8 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
 Identities = 8/22 (36%), Positives = 10/22 (45%)

Query:   222 SGNNDSSCWSGGSNGWPDLAIY 243
             +G   S  W+ G   W DL  Y
Sbjct:   292 TGGGGSE-WNNGIQAWTDLNHY 312


>TAIR|locus:2019499 [details] [associations]
            symbol:AT1G64620 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] InterPro:IPR003851
            Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
            EMBL:AC009519 EMBL:BT004047 EMBL:BT005148 EMBL:AY084898
            IPI:IPI00537731 PIR:E96669 RefSeq:NP_564836.1 UniGene:At.35979
            IntAct:Q84JQ8 EnsemblPlants:AT1G64620.1 GeneID:842770
            KEGG:ath:AT1G64620 GeneFarm:4460 TAIR:At1g64620 eggNOG:NOG247852
            HOGENOM:HOG000239394 InParanoid:Q84JQ8 OMA:KPMNEIV PhylomeDB:Q84JQ8
            ProtClustDB:CLSN2917381 Genevestigator:Q84JQ8 GermOnline:AT1G64620
            Uniprot:Q84JQ8
        Length = 352

 Score = 289 (106.8 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
 Identities = 52/90 (57%), Positives = 63/90 (70%)

Query:     4 PATFNPMKPHFPESEQ-LKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRN 62
             PAT    K   PE +Q L CPRC S NTKFCYYNNY+L+QPR+FCK+CRRYWT GG+LRN
Sbjct:    33 PATPVERKAR-PEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRN 91

Query:    63 IPIGGGTRKSNTKKRQKPDPDPSRSNPTRK 92
             IP+GGG RK+           PS S+ ++K
Sbjct:    92 IPVGGGVRKNKRSSSNSSSSSPSSSSSSKK 121

 Score = 37 (18.1 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
 Identities = 8/34 (23%), Positives = 19/34 (55%)

Query:    84 PSRSNPTRKSQETANTQSMLQAAATTSTSSQEPA 117
             PS S        T+++  +L  ++++++S+  PA
Sbjct:   193 PSSSMKNNPLVSTSSSLELLGISSSSASSNSRPA 226


>TAIR|locus:2159275 [details] [associations]
            symbol:OBP4 "OBF binding protein 4" species:3702
            "Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS]
            InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
            PROSITE:PS50884 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            GO:GO:0003700 GO:GO:0006351 EMBL:AB015472 EMBL:AF155817
            EMBL:AY056413 EMBL:AY081709 EMBL:AY085856 IPI:IPI00530257
            RefSeq:NP_200893.1 UniGene:At.20219 EnsemblPlants:AT5G60850.1
            GeneID:836206 KEGG:ath:AT5G60850 GeneFarm:4392 TAIR:At5g60850
            eggNOG:NOG253520 HOGENOM:HOG000090954 OMA:WSQSQWT PhylomeDB:Q8LDR0
            ProtClustDB:CLSN2686706 Genevestigator:Q8LDR0 GermOnline:AT5G60850
            Uniprot:Q8LDR0
        Length = 307

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 58/98 (59%), Positives = 69/98 (70%)

Query:    18 EQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKKR 77
             + LKCPRC S NTKFCYYNNYNLSQPRHFCKNCRRYWT+GG LRN+P+GGG RK+   KR
Sbjct:    49 QSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKA---KR 105

Query:    78 QKPDPDPSRSNPTRKSQETANTQSMLQAAATTSTSSQE 115
              K    PS S+   K   T +   + + ++T S SS E
Sbjct:   106 SKTKQVPSSSSAD-KPTTTQDDHHVEEKSSTGSHSSSE 142


>TAIR|locus:2039959 [details] [associations]
            symbol:DAG2 "DOF AFFECTING GERMINATION 2" species:3702
            "Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0009409 "response
            to cold" evidence=IMP] [GO:0009416 "response to light stimulus"
            evidence=IMP] [GO:0009845 "seed germination" evidence=IMP]
            [GO:0006598 "polyamine catabolic process" evidence=RCA] [GO:0009698
            "phenylpropanoid metabolic process" evidence=RCA] [GO:0042398
            "cellular modified amino acid biosynthetic process" evidence=RCA]
            InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
            PROSITE:PS50884 GO:GO:0005634 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0009409
            GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0009845
            GO:GO:0009416 EMBL:AC006418 HOGENOM:HOG000239394 EMBL:AJ237810
            EMBL:AJ237811 EMBL:BT003328 EMBL:BT008842 IPI:IPI00533417
            IPI:IPI00547843 PIR:G84904 RefSeq:NP_001031549.1 RefSeq:NP_182182.2
            UniGene:At.43221 PRIDE:Q9ZPY0 EnsemblPlants:AT2G46590.2
            GeneID:819271 KEGG:ath:AT2G46590 GeneFarm:4409 TAIR:At2g46590
            eggNOG:NOG252364 InParanoid:Q9ZPY0 OMA:NARPNTI PhylomeDB:Q9ZPY0
            ProtClustDB:CLSN2684099 Genevestigator:Q9ZPY0 GermOnline:AT2G46590
            Uniprot:Q9ZPY0
        Length = 369

 Score = 265 (98.3 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
 Identities = 41/55 (74%), Positives = 50/55 (90%)

Query:    18 EQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKS 72
             E+L CPRC STNTKFCYYNNY+L+QPR+FCK CRRYWT GG+LRN+P+GG +RK+
Sbjct:    78 EKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKN 132

 Score = 51 (23.0 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
 Identities = 19/75 (25%), Positives = 30/75 (40%)

Query:   175 NGSGFKMVQMGGFGENFGSDQS-LDLISVRXXXXXXXXXXXXXESFMQSGNN-DSSCWSG 232
             NG+     Q       +GS  S +  + +               SFM SG+  DS+    
Sbjct:   205 NGNITHQQQPSSSSSVYGSSSSPVSALELLRTGVNVSSRSGINSSFMPSGSMMDSNTVLY 264

Query:   233 GSNGWPDLAIYTPSS 247
              S+G+P +  Y PS+
Sbjct:   265 TSSGFPTMVDYKPSN 279


>TAIR|locus:2040746 [details] [associations]
            symbol:DOF2.4 "DNA binding with one finger 2.4"
            species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA;TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0010089 "xylem development"
            evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
            process" evidence=RCA] InterPro:IPR003851 Pfam:PF02701
            ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:AC004684
            GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
            HOGENOM:HOG000239956 EMBL:BT030014 IPI:IPI00519602 PIR:T02525
            RefSeq:NP_181295.1 UniGene:At.50120 EnsemblPlants:AT2G37590.1
            GeneID:818336 KEGG:ath:AT2G37590 GeneFarm:4464 TAIR:At2g37590
            eggNOG:NOG313751 OMA:DEWRSAS PhylomeDB:O80928
            ProtClustDB:CLSN2912900 Genevestigator:O80928 GermOnline:AT2G37590
            Uniprot:O80928
        Length = 330

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 59/98 (60%), Positives = 70/98 (71%)

Query:    15 PESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNT 74
             PE+  LKCPRCESTNTKFCY+NNY+L+QPRHFCK CRRYWTRGGALRN+P+GGG R++  
Sbjct:    85 PEAA-LKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRN-- 141

Query:    75 KKRQKPDPDPSRSNPTRKSQETANTQSMLQA-AATTST 111
              +R K     S SN    S  T+N  S     A+T ST
Sbjct:   142 -RRTK-----SNSNNNNNSTATSNNTSFSSGNASTIST 173


>TAIR|locus:2026595 [details] [associations]
            symbol:OBP2 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] [GO:0009611 "response to wounding"
            evidence=IEP] [GO:0009625 "response to insect" evidence=IEP]
            [GO:0009753 "response to jasmonic acid stimulus" evidence=IEP]
            [GO:0010439 "regulation of glucosinolate biosynthetic process"
            evidence=IEP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
            "protein targeting to membrane" evidence=RCA] [GO:0009595
            "detection of biotic stimulus" evidence=RCA] [GO:0009697 "salicylic
            acid biosynthetic process" evidence=RCA] [GO:0009862 "systemic
            acquired resistance, salicylic acid mediated signaling pathway"
            evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
            pathway" evidence=RCA] [GO:0010200 "response to chitin"
            evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
            metabolic process" evidence=RCA] [GO:0010363 "regulation of
            plant-type hypersensitive response" evidence=RCA] [GO:0019761
            "glucosinolate biosynthetic process" evidence=RCA] [GO:0031348
            "negative regulation of defense response" evidence=RCA] [GO:0042742
            "defense response to bacterium" evidence=RCA] [GO:0043900
            "regulation of multi-organism process" evidence=RCA] [GO:0050832
            "defense response to fungus" evidence=RCA] [GO:0003002
            "regionalization" evidence=IMP] InterPro:IPR003851 Pfam:PF02701
            ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:CP002684
            GO:GO:0005634 GO:GO:0009753 GO:GO:0009611 GO:GO:0003677
            GO:GO:0008270 GO:GO:0003700 EMBL:AC007583 GO:GO:0009625
            HOGENOM:HOG000239956 ProtClustDB:CLSN2690762 GO:GO:0010439
            GO:GO:0003002 IPI:IPI00657301 RefSeq:NP_001030988.1
            UniGene:At.14846 STRING:Q2V4Q1 PRIDE:Q2V4Q1
            EnsemblPlants:AT1G07640.3 GeneID:837277 KEGG:ath:AT1G07640
            OMA:NIHENNN Genevestigator:Q2V4Q1 Uniprot:Q2V4Q1
        Length = 339

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 54/102 (52%), Positives = 72/102 (70%)

Query:    15 PESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNT 74
             P +  LKCPRC+S+NTKFCYYNNYNL+QPRHFCK CRRYWT+GGALRN+P+GGG R++N 
Sbjct:    80 PLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNK 139

Query:    75 KKRQKPDPDPSRSNPTRKSQETANTQSMLQAAATTSTSSQEP 116
             K +   + +   S+ + K   + N QS   ++    T+ Q P
Sbjct:   140 KGK---NGNLKSSSSSSKQSSSVNAQS--PSSGQLRTNHQFP 176


>TAIR|locus:2053175 [details] [associations]
            symbol:AT2G28810 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] InterPro:IPR003851
            Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
            GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
            EMBL:AC005727 EMBL:BT032877 IPI:IPI00541552 PIR:B84689
            RefSeq:NP_850126.1 UniGene:At.38565 PRIDE:Q9ZV33
            EnsemblPlants:AT2G28810.1 GeneID:817430 KEGG:ath:AT2G28810
            GeneFarm:4462 TAIR:At2g28810 eggNOG:NOG301760 HOGENOM:HOG000239956
            InParanoid:Q9ZV33 OMA:DPPINWP PhylomeDB:Q9ZV33
            ProtClustDB:CLSN2690762 Genevestigator:Q9ZV33 GermOnline:AT2G28810
            Uniprot:Q9ZV33
        Length = 340

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 55/103 (53%), Positives = 69/103 (66%)

Query:    15 PESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNT 74
             P    LKCPRC+S NTKFCY+NNYNL+QPRHFCK CRRYWTRGGALRN+P+GGG R++  
Sbjct:    89 PPEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRRN-- 146

Query:    75 KKRQKPDPDPSRSNPTRKSQETANTQSMLQAA-ATTSTSSQEP 116
             KK +  +   S S+  ++S    N  S    +     T+SQ P
Sbjct:   147 KKGKSGNSKSSSSSQNKQSTSMVNATSPTNTSNVQLQTNSQFP 189


>TAIR|locus:2181773 [details] [associations]
            symbol:AT5G02460 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] InterPro:IPR003851
            Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
            HOGENOM:HOG000239956 EMBL:AL162874 EMBL:AL162971 EMBL:BX829408
            IPI:IPI00547892 PIR:T48267 RefSeq:NP_195866.1 UniGene:At.33412
            ProteinModelPortal:Q9LZ56 STRING:Q9LZ56 PRIDE:Q9LZ56
            EnsemblPlants:AT5G02460.1 GeneID:830976 KEGG:ath:AT5G02460
            GeneFarm:4474 TAIR:At5g02460 eggNOG:NOG272365 InParanoid:Q9LZ56
            OMA:HHRAMAN PhylomeDB:Q9LZ56 ProtClustDB:CLSN2916772
            Genevestigator:Q9LZ56 GermOnline:AT5G02460 Uniprot:Q9LZ56
        Length = 399

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 53/103 (51%), Positives = 69/103 (66%)

Query:    15 PESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNT 74
             PE+  LKCPRC+STNTKFCY+NNY+L+QPRHFCK CRRYWTRGGALR++P+GGG R++  
Sbjct:    91 PETA-LKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRRNKR 149

Query:    75 KKRQKPDPDPSRSNPTRKSQETANTQSMLQAAATTSTSSQEPA 117
              K        S S+   KSQ++A +       A  +     P+
Sbjct:   150 TKNSSGGGGGSTSSGNSKSQDSATSNDQYHHRAMANNQMGPPS 192


>TAIR|locus:505006172 [details] [associations]
            symbol:AT1G47655 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] InterPro:IPR003851
            Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
            EMBL:AC007519 EMBL:AB493502 IPI:IPI00541489 PIR:E96517
            RefSeq:NP_564510.1 UniGene:At.38579 EnsemblPlants:AT1G47655.1
            GeneID:841175 KEGG:ath:AT1G47655 GeneFarm:4459 TAIR:At1g47655
            eggNOG:NOG248157 HOGENOM:HOG000005865 OMA:GLEISMQ
            ProtClustDB:CLSN2917178 Genevestigator:Q9SX97 GermOnline:AT1G47655
            Uniprot:Q9SX97
        Length = 209

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 61/145 (42%), Positives = 83/145 (57%)

Query:     4 PATFNPMKPHFPE---SEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGAL 60
             P    P    +P    +E L CPRC ST TKFCYYNNYNL+QPR++CK+CRRYWT+GG L
Sbjct:    10 PTRVQPSTAAYPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTL 69

Query:    61 RNIPIGGGTRKSNTKKRQK-----PDPDPSRSNPTRKSQETANTQSMLQAAATTSTSSQE 115
             R++P+GGGTR+S++K+ +           S S  T  +QE A T++  Q   T   S   
Sbjct:    70 RDVPVGGGTRRSSSKRHRSFSTTATSSSSSSSVITTTTQEPATTEAS-QTKVTNLISGHG 128

Query:   116 PAVTLPGAVARESGTEHDPRRLYGL 140
                +L G  +   G ++     YGL
Sbjct:   129 SFASLLGLGSGNGGLDYGFGYGYGL 153


>TAIR|locus:2170753 [details] [associations]
            symbol:HCA2 "HIGH CAMBIAL ACTIVITY2" species:3702
            "Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS;TAS]
            [GO:0010067 "procambium histogenesis" evidence=IMP] [GO:0010087
            "phloem or xylem histogenesis" evidence=IMP] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
            PROSITE:PS50884 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0010087
            EMBL:AB009053 GO:GO:0010067 HOGENOM:HOG000239394 EMBL:BT020467
            EMBL:BT020576 IPI:IPI00528642 RefSeq:NP_201099.1 UniGene:At.29026
            EnsemblPlants:AT5G62940.1 GeneID:836414 KEGG:ath:AT5G62940
            GeneFarm:4478 TAIR:At5g62940 eggNOG:NOG236688 InParanoid:Q9FM03
            OMA:MALAHSH PhylomeDB:Q9FM03 ProtClustDB:CLSN2687377
            Genevestigator:Q9FM03 GermOnline:AT5G62940 Uniprot:Q9FM03
        Length = 372

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 55/103 (53%), Positives = 67/103 (65%)

Query:    15 PESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNT 74
             P     KCPRCEST+TKFCYYNNY+LSQPR+FCK CRRYWT+GG LRNIP+GGG RK+  
Sbjct:    68 PHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKN-- 125

Query:    75 KKRQKPDPDPSRSNPTRKSQ-ETANTQSMLQAAATTSTSSQEP 116
             KK    +   S S+  + S   TANT  ++  A +       P
Sbjct:   126 KKPSSSNSSSSTSSGKKPSNIVTANTSDLMALAHSHQNYQHSP 168


>TAIR|locus:2121041 [details] [associations]
            symbol:DOF4.7 "DNA binding with one finger 4.7"
            species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
            evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA;TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0010227 "floral organ abscission"
            evidence=IMP] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0006863 "purine nucleobase
            transport" evidence=RCA] InterPro:IPR003851 Pfam:PF02701
            ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634
            GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161592
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
            GO:GO:0006351 GO:GO:0010227 EMBL:AL035538 EMBL:BT005767
            EMBL:BT006092 IPI:IPI00529950 PIR:T05627 RefSeq:NP_195513.2
            UniGene:At.2738 EnsemblPlants:AT4G38000.1 GeneID:829956
            KEGG:ath:AT4G38000 GeneFarm:4473 TAIR:At4g38000 eggNOG:NOG286318
            HOGENOM:HOG000090627 OMA:TSGNHED PhylomeDB:Q84K52
            ProtClustDB:CLSN2918298 Genevestigator:Q84K52 GermOnline:AT4G38000
            Uniprot:Q84K52
        Length = 246

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 49/70 (70%), Positives = 54/70 (77%)

Query:     4 PATFNPMKPHFPESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNI 63
             P   N  +P       LKCPRC+S NTKFCYYNNY+LSQPRH+CKNCRRYWTRGGALRN+
Sbjct:    25 PRQINNKEPSPATQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNV 84

Query:    64 PIGGGTRKSN 73
             PIGG TR  N
Sbjct:    85 PIGGSTRNKN 94


>TAIR|locus:2158078 [details] [associations]
            symbol:AT5G66940 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] InterPro:IPR003851
            Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
            HOGENOM:HOG000005865 EMBL:AB026640 EMBL:BT029523 IPI:IPI00549015
            RefSeq:NP_201495.1 UniGene:At.66743 DNASU:836828
            EnsemblPlants:AT5G66940.1 GeneID:836828 KEGG:ath:AT5G66940
            GeneFarm:4480 TAIR:At5g66940 eggNOG:NOG310676 InParanoid:Q9FGD6
            OMA:LINYNAA PhylomeDB:Q9FGD6 ProtClustDB:CLSN2916526
            ArrayExpress:Q9FGD6 Genevestigator:Q9FGD6 GermOnline:AT5G66940
            Uniprot:Q9FGD6
        Length = 225

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 47/62 (75%), Positives = 54/62 (87%)

Query:    16 ESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTK 75
             + EQL CPRCESTNTKFCYYNNYN SQPRHFCK+CRRYWT GG LR+IP+GG +RKS+ +
Sbjct:    28 QQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKSSKR 87

Query:    76 KR 77
              R
Sbjct:    88 SR 89


>TAIR|locus:2032153 [details] [associations]
            symbol:AT1G28310 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] InterPro:IPR003851
            Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
            EMBL:CP002684 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
            EMBL:AC021044 IPI:IPI00656949 RefSeq:NP_001031100.1
            UniGene:At.40918 PRIDE:Q2V4K7 EnsemblPlants:AT1G28310.2
            GeneID:839725 KEGG:ath:AT1G28310 HOGENOM:HOG000097069 OMA:MIVASSH
            ProtClustDB:CLSN2719915 Genevestigator:Q2V4K7 Uniprot:Q2V4K7
        Length = 325

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 54/92 (58%), Positives = 65/92 (70%)

Query:    11 KPHFPESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTR 70
             +P  P+  QLKCPRC+S+NTKFCYYNNY+LSQPRHFCK C+RYWTRGG LRN+P+GG  R
Sbjct:    33 QPQQPQP-QLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGSYR 91

Query:    71 KSNTKKRQKPDPDPSRSNPTRKSQ-ETANTQS 101
             K+   KR      PS +  T  S   T N+ S
Sbjct:    92 KNKRVKR------PSTATTTTASTVSTTNSSS 117

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 65/128 (50%), Positives = 78/128 (60%)

Query:    19 QLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKKRQ 78
             QLKCPRC+S+NTKFCYYNNY+LSQPRHFCK C+RYWTRGG LRN+P+GG  RK+   KR 
Sbjct:    40 QLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGSYRKNKRVKR- 98

Query:    79 KPDPDPSRSNPTRKSQETANTQSMLQAAATTSTSSQEPAVTLPGAVARESGTEHDPRRLY 138
                  PS +  T     TA+T S      TT++SS       P  ++  S   H P   Y
Sbjct:    99 -----PSTATTT-----TASTVS------TTNSSSPNN----PHQISHFSSMNHHPL-FY 137

Query:   139 GLPLDQDH 146
             GL    DH
Sbjct:   138 GL---SDH 142


>TAIR|locus:2085697 [details] [associations]
            symbol:DOF6 "DOF transcription factor 6" species:3702
            "Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS]
            InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
            PROSITE:PS50884 GO:GO:0005634 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000112244 EMBL:AJ243033
            EMBL:AL138657 EMBL:AY062783 EMBL:BT006284 IPI:IPI00532759
            PIR:T47501 RefSeq:NP_190147.1 UniGene:At.478
            EnsemblPlants:AT3G45610.1 GeneID:823703 KEGG:ath:AT3G45610
            GeneFarm:4402 TAIR:At3g45610 eggNOG:NOG258725 OMA:NISNEQM
            PhylomeDB:Q9M1E6 ProtClustDB:CLSN2684760 Genevestigator:Q9M1E6
            GermOnline:AT3G45610 Uniprot:Q9M1E6
        Length = 245

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 52/88 (59%), Positives = 66/88 (75%)

Query:    15 PESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRK--- 71
             P  + L+CPRC+STNTKFCYYNNY+LSQPR+FCK+CRRYWT+GG LRNIPIGG  RK   
Sbjct:    35 PPEQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKHKR 94

Query:    72 -SNTKKRQKPDPDPSRSNPTRKSQETAN 98
              S+  K  +  P+P+ ++   KS  TA+
Sbjct:    95 SSSATKSLRTTPEPTMTHDG-KSFPTAS 121


>TAIR|locus:2134981 [details] [associations]
            symbol:AT4G24060 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] InterPro:IPR003851
            Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
            GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
            EMBL:AC002343 EMBL:AL161560 HOGENOM:HOG000239394 EMBL:AL109619
            EMBL:AY037220 EMBL:BT008771 EMBL:AY087686 IPI:IPI00536658
            IPI:IPI00548740 PIR:T13450 RefSeq:NP_567693.1 UniGene:At.3662
            STRING:Q8LAP8 PRIDE:Q8LAP8 EnsemblPlants:AT4G24060.1 GeneID:828506
            KEGG:ath:AT4G24060 GeneFarm:4472 TAIR:At4g24060 eggNOG:NOG270420
            InParanoid:Q8LAP8 OMA:SCSAMAT PhylomeDB:Q8LAP8
            ProtClustDB:CLSN2917601 Genevestigator:Q8LAP8 GermOnline:AT4G24060
            Uniprot:Q8LAP8
        Length = 342

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 52/118 (44%), Positives = 73/118 (61%)

Query:     2 QDPATFNPMKPHFPESEQ-LKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGAL 60
             Q P +    +   PE +Q + CPRC STNTKFCYYNNY+L+QPR+FCK CRRYWT GG+L
Sbjct:    34 QQPPSVGGERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSL 93

Query:    61 RNIPIGGGTRKSNTKKRQKPDPDPSRSNPTRKS--QETANTQSMLQAAATTSTSSQEP 116
             RNIP+GGG+RK+        D   + S+ T+ +  +  ++    L + +    + Q P
Sbjct:    94 RNIPVGGGSRKNKRSHSSSSDISNNHSDSTQPATKKHLSDHHHHLMSMSQQGLTGQNP 151


>TAIR|locus:2144030 [details] [associations]
            symbol:TMO6 "TARGET OF MONOPTEROS 6" species:3702
            "Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0048364
            "root development" evidence=IEP] [GO:0009855 "determination of
            bilateral symmetry" evidence=RCA] [GO:0009944 "polarity
            specification of adaxial/abaxial axis" evidence=RCA] [GO:0010014
            "meristem initiation" evidence=RCA] [GO:0010075 "regulation of
            meristem growth" evidence=RCA] InterPro:IPR003851 Pfam:PF02701
            ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
            HOGENOM:HOG000112244 ProtClustDB:CLSN2684760 EMBL:AB026632
            EMBL:BT005866 EMBL:AY086054 IPI:IPI00545477 RefSeq:NP_568920.1
            UniGene:At.29177 PaxDb:Q84TE9 PRIDE:Q84TE9
            EnsemblPlants:AT5G60200.1 GeneID:836142 KEGG:ath:AT5G60200
            GeneFarm:4476 TAIR:At5g60200 eggNOG:NOG268327 OMA:KENATYA
            PhylomeDB:Q84TE9 Genevestigator:Q84TE9 GermOnline:AT5G60200
            Uniprot:Q84TE9
        Length = 257

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 51/87 (58%), Positives = 65/87 (74%)

Query:     4 PATFNPMKPHFPESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNI 63
             PAT    +P  PE   L+CPRC+STNTKFCYYNNY+L+QPR+FCK+CRRYWT+GG LRNI
Sbjct:    41 PATA-VTRPQPPELA-LRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNI 98

Query:    64 PIGGGTRK-----SNTKKRQKPDPDPS 85
             P+GGG RK     S+  +  +  P+P+
Sbjct:    99 PVGGGCRKNKRSTSSAARSLRTTPEPA 125


>TAIR|locus:2079492 [details] [associations]
            symbol:DAG1 "dof affecting germination 1" species:3702
            "Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0009845 "seed germination" evidence=IMP]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0009639 "response to red or far red
            light" evidence=IMP] InterPro:IPR003851 Pfam:PF02701
            ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634
            EMBL:CP002686 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
            GO:GO:0009639 EMBL:AL138642 HOGENOM:HOG000239394
            ProtClustDB:CLSN2684099 IPI:IPI00892346 RefSeq:NP_001118885.1
            UniGene:At.989 STRING:B3H6D1 PRIDE:B3H6D1 EnsemblPlants:AT3G61850.4
            GeneID:825358 KEGG:ath:AT3G61850 OMA:IGHNTIN Genevestigator:B3H6D1
            Uniprot:B3H6D1
        Length = 324

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 50/85 (58%), Positives = 62/85 (72%)

Query:     5 ATFNPMKPHFPESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIP 64
             AT    K   P+ E++ CPRC STNTKFCYYNNY+L+QPR+FCK CRRYWT GG+LRN+P
Sbjct:    61 ATMETRKAR-PQ-EKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVP 118

Query:    65 IGGGTRKSNTKKRQKPDPDPSRSNP 89
             +GG +RK+  K+   P   PS  NP
Sbjct:   119 VGGSSRKN--KRSSTPLASPS--NP 139


>TAIR|locus:2134658 [details] [associations]
            symbol:AT4G00940 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006457 "protein
            folding" evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
            [GO:0009644 "response to high light intensity" evidence=RCA]
            [GO:0009691 "cytokinin biosynthetic process" evidence=RCA]
            [GO:0042542 "response to hydrogen peroxide" evidence=RCA]
            InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
            PROSITE:PS50884 GO:GO:0005634 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            GO:GO:0003700 GO:GO:0006351 EMBL:AF013294 EMBL:AL161491
            HOGENOM:HOG000239394 EMBL:AB493666 IPI:IPI00517988 PIR:F85012
            PIR:T01552 RefSeq:NP_192003.2 UniGene:At.34496 PRIDE:Q9M161
            EnsemblPlants:AT4G00940.1 GeneID:827952 KEGG:ath:AT4G00940
            GeneFarm:4466 TAIR:At4g00940 eggNOG:NOG310367 PhylomeDB:Q9M161
            ProtClustDB:CLSN2915022 Genevestigator:Q9M161 GermOnline:AT4G00940
            Uniprot:Q9M161
        Length = 294

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 51/97 (52%), Positives = 70/97 (72%)

Query:    18 EQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKKR 77
             E   CPRC S+NTKFCYYNNY+L+QPR+ CK+CRRYWT GG+LRN+P+GGG+RK+  KK 
Sbjct:    66 EPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKN--KKL 123

Query:    78 QKPDPDPSRSNPTRKSQETANTQSMLQAAATTSTSSQ 114
               P P+ S S+ T K+    N   +  ++A++S  S+
Sbjct:   124 --PFPNSSTSSST-KNLPDLNPPFVFTSSASSSNPSK 157


>TAIR|locus:2079954 [details] [associations]
            symbol:AT3G52440 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] InterPro:IPR003851
            Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
            GO:GO:0005634 EMBL:CP002686 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AL050300
            IPI:IPI00523054 PIR:T08455 RefSeq:NP_190812.1 UniGene:At.53903
            EnsemblPlants:AT3G52440.1 GeneID:824409 KEGG:ath:AT3G52440
            GeneFarm:4465 TAIR:At3g52440 eggNOG:NOG271786 InParanoid:Q9SVC5
            OMA:YANFLNP PhylomeDB:Q9SVC5 ProtClustDB:CLSN2915499
            Genevestigator:Q9SVC5 Uniprot:Q9SVC5
        Length = 247

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 49/78 (62%), Positives = 60/78 (76%)

Query:    22 CPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKKRQKPD 81
             CPRC S+NTKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRN+P+GGG RKS   +R    
Sbjct:    27 CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKS---RR---- 79

Query:    82 PDPSRSNPTRKSQETANT 99
             P  S  N T+ S  TAN+
Sbjct:    80 PKSSSGNNTKTSL-TANS 96


>TAIR|locus:2027027 [details] [associations]
            symbol:AT1G21340 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] InterPro:IPR003851
            Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
            EMBL:CP002684 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AC015447
            EMBL:DQ446268 IPI:IPI00548608 RefSeq:NP_173556.1 UniGene:At.51708
            EnsemblPlants:AT1G21340.1 GeneID:838733 KEGG:ath:AT1G21340
            GeneFarm:4455 TAIR:At1g21340 eggNOG:NOG324820 InParanoid:P68349
            OMA:GRNENRP PhylomeDB:P68349 ProtClustDB:CLSN2913539
            ArrayExpress:P68349 Genevestigator:P68349 Uniprot:P68349
        Length = 260

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 43/57 (75%), Positives = 51/57 (89%)

Query:    22 CPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKKRQ 78
             CPRC S+NTKFCYYNNY+LSQPR+FCK CRRYWT+GG+LRNIP+GGG RK  ++ RQ
Sbjct:    40 CPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRK-RSRSRQ 95


>TAIR|locus:2056588 [details] [associations]
            symbol:AT2G28510 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0005730
            "nucleolus" evidence=IDA] InterPro:IPR003851 Pfam:PF02701
            ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AC006587
            EMBL:AY070421 EMBL:BT001954 EMBL:AY085635 IPI:IPI00520106
            PIR:G84685 RefSeq:NP_565673.1 UniGene:At.28359 DNASU:817399
            EnsemblPlants:AT2G28510.1 GeneID:817399 KEGG:ath:AT2G28510
            GeneFarm:4461 TAIR:At2g28510 eggNOG:NOG301259 HOGENOM:HOG000112244
            OMA:GRESWNG PhylomeDB:Q8LE43 ProtClustDB:CLSN2688517
            Genevestigator:Q8LE43 GermOnline:AT2G28510 Uniprot:Q8LE43
        Length = 288

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 51/108 (47%), Positives = 66/108 (61%)

Query:    18 EQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKKR 77
             E   CPRCES NTKFCYYNNY+LSQPR+FCK+CRRYWT+GG LRN+P+GGG R++   KR
Sbjct:    46 EAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRN---KR 102

Query:    78 QKPDPDPSRSNPTRKSQETANTQSMLQAAATTSTSSQEPAVTLPGAVA 125
                      +N    +  T   Q+ L      S+   + ++ L  A A
Sbjct:   103 SSSSAFSKNNNNKSINFHTDPLQNPLITGMPPSSFGYDHSIDLNLAFA 150


>TAIR|locus:2133079 [details] [associations]
            symbol:DOF4.4 "DNA-binding with One Finger 4.4"
            species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0010154 "fruit development" evidence=IMP] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:2000032 "regulation of secondary shoot formation" evidence=IMP]
            InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
            PROSITE:PS50884 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
            GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
            GO:GO:0010154 HOGENOM:HOG000097076 ProtClustDB:CLSN2685338
            GO:GO:2000032 EMBL:AB493689 IPI:IPI00543578 PIR:T10647
            RefSeq:NP_193837.1 UniGene:At.54450 PRIDE:Q9SUA9 DNASU:827852
            EnsemblPlants:AT4G21050.1 GeneID:827852 KEGG:ath:AT4G21050
            GeneFarm:4469 TAIR:At4g21050 eggNOG:NOG287569 OMA:NYSESQP
            PhylomeDB:Q9SUA9 Genevestigator:Q9SUA9 GermOnline:AT4G21050
            Uniprot:Q9SUA9
        Length = 210

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 50/83 (60%), Positives = 56/83 (67%)

Query:    22 CPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKKRQKPD 81
             CPRC+S NTKFC+YNNY+ SQPR+FCKNCRRYWT GGALRNIP+GG  RK    KR K D
Sbjct:    26 CPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGGSCRKP---KRLKVD 82

Query:    82 PDPSRSNPTRKSQETANTQSMLQ 104
                S S       +  N QS  Q
Sbjct:    83 QS-SISEMVSVENQPINHQSFRQ 104


>TAIR|locus:2127353 [details] [associations]
            symbol:DOF4.5 "DNA-binding with One Finger 4.5"
            species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA;TAS]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478
            PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634 EMBL:CP002687
            GenomeReviews:CT486007_GR EMBL:AL161554 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AL021960
            HOGENOM:HOG000097076 ProtClustDB:CLSN2685338 eggNOG:NOG279085
            EMBL:AB493690 IPI:IPI00526819 PIR:T04939 RefSeq:NP_193840.1
            UniGene:At.64194 DNASU:827855 EnsemblPlants:AT4G21080.1
            GeneID:827855 KEGG:ath:AT4G21080 GeneFarm:4470 TAIR:At4g21080
            OMA:ARMVSVE PhylomeDB:O49550 Genevestigator:O49550
            GermOnline:AT4G21080 Uniprot:O49550
        Length = 249

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 57/128 (44%), Positives = 70/128 (54%)

Query:     8 NPMKPHFPESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGG 67
             N +KP  P      C RC+S NTKFCYYNNY   QPR+FCKNCRRYWT GGALRNIPIGG
Sbjct:    15 NDVKP--PPPPPRVCARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGG 72

Query:    68 GTRKSNTKKRQKPDPDPSRSNPTRK--SQETANTQSMLQAAATTSTSSQEPAVTLPGAVA 125
              +R    +  Q P      S  T++  +Q  +N Q  +    +   SS        GAV 
Sbjct:    73 SSRAKRARVNQ-PSVARMVSVETQRGNNQPFSNVQENVHLVGSFGASSSSSV----GAVG 127

Query:   126 RESGTEHD 133
                G+ +D
Sbjct:   128 NLFGSLYD 135


>TAIR|locus:2133064 [details] [associations]
            symbol:DOF4.3 "AT4G21040" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IDA] InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478
            PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634 EMBL:CP002687
            GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554 GO:GO:0046872
            GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
            HOGENOM:HOG000097076 ProtClustDB:CLSN2685338 EMBL:AB493688
            IPI:IPI00544172 PIR:T10646 RefSeq:NP_193836.1 UniGene:At.64193
            DNASU:827851 EnsemblPlants:AT4G21040.1 GeneID:827851
            KEGG:ath:AT4G21040 GeneFarm:4468 TAIR:At4g21040 eggNOG:NOG279085
            PhylomeDB:Q9SUB0 Genevestigator:Q9SUB0 Uniprot:Q9SUB0
        Length = 232

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 44/71 (61%), Positives = 51/71 (71%)

Query:     8 NPMKPHFPESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGG 67
             N +KP  P      C RC+S NTKFCYYNNY+  QPR+FCKNCRRYWT GGALRN+PIGG
Sbjct:    15 NDVKP--PPPPPRVCARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGGALRNVPIGG 72

Query:    68 GTRKSNTKKRQ 78
              +R   T+  Q
Sbjct:    73 SSRAKRTRINQ 83


>TAIR|locus:2007151 [details] [associations]
            symbol:AT1G69570 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;IDA;TAS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] InterPro:IPR003851
            Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
            EMBL:AC073178 HOGENOM:HOG000239772 EMBL:AF079504 EMBL:AC021046
            EMBL:AK176346 EMBL:BT025623 IPI:IPI00525897 PIR:D96717 PIR:T51953
            RefSeq:NP_177116.1 UniGene:At.10732 STRING:Q9SEZ3
            EnsemblPlants:AT1G69570.1 GeneID:843293 KEGG:ath:AT1G69570
            GeneFarm:4399 TAIR:At1g69570 eggNOG:NOG236464 OMA:RINDTNT
            PhylomeDB:Q9SEZ3 ProtClustDB:CLSN2682558 Genevestigator:Q9SEZ3
            GermOnline:AT1G69570 Uniprot:Q9SEZ3
        Length = 399

 Score = 252 (93.8 bits), Expect = 2.5e-21, P = 2.5e-21
 Identities = 37/53 (69%), Positives = 48/53 (90%)

Query:    20 LKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKS 72
             + CPRCES NTKFCYYNNYN++QPR+FC+NC+RYWT GG++RN+P+G G RK+
Sbjct:   132 IPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKN 184


>TAIR|locus:2030006 [details] [associations]
            symbol:AT1G29160 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] InterPro:IPR003851
            Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
            EMBL:AC021043 HOGENOM:HOG000090574 ProtClustDB:CLSN2679679
            EMBL:BT029990 IPI:IPI00521362 RefSeq:NP_174211.1 UniGene:At.64845
            EnsemblPlants:AT1G29160.1 GeneID:839790 KEGG:ath:AT1G29160
            GeneFarm:4458 TAIR:At1g29160 eggNOG:NOG279976 InParanoid:P68350
            OMA:LRCYTDG PhylomeDB:P68350 ArrayExpress:P68350
            Genevestigator:P68350 GermOnline:AT1G29160 Uniprot:P68350
        Length = 175

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 39/58 (67%), Positives = 47/58 (81%)

Query:    20 LKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKKR 77
             + CPRC+S  TKFCY+NNYN++QPRHFCK C+RYWT GGALRN+P+G G RKS    R
Sbjct:    62 IPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGR 119


>TAIR|locus:2055506 [details] [associations]
            symbol:AT2G34140 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] InterPro:IPR003851
            Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
            GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
            EMBL:AC002341 EMBL:BT010496 EMBL:AK221308 IPI:IPI00538613
            PIR:H84752 RefSeq:NP_180961.1 UniGene:At.43132
            EnsemblPlants:AT2G34140.1 GeneID:817975 KEGG:ath:AT2G34140
            GeneFarm:4463 TAIR:At2g34140 eggNOG:NOG326560 HOGENOM:HOG000090574
            InParanoid:O22967 OMA:IACPRCK PhylomeDB:O22967
            ProtClustDB:CLSN2679679 Genevestigator:O22967 GermOnline:AT2G34140
            Uniprot:O22967
        Length = 170

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 39/58 (67%), Positives = 46/58 (79%)

Query:    20 LKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKKR 77
             + CPRC+S  TKFCY+NNYN++QPRHFCK C RYWT GGALRN+P+G G RKS    R
Sbjct:    58 IACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGR 115


>TAIR|locus:2079152 [details] [associations]
            symbol:CDF3 "cycling DOF factor 3" species:3702
            "Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0048510 "regulation of timing
            of transition from vegetative to reproductive phase" evidence=IMP]
            InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
            PROSITE:PS50884 GO:GO:0005634 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            GO:GO:0003700 GO:GO:0006351 EMBL:AL132955 HOGENOM:HOG000239772
            EMBL:AF079503 EMBL:AY065152 EMBL:AY128757 EMBL:AY084628
            IPI:IPI00547330 PIR:T45710 RefSeq:NP_190334.1 UniGene:At.519
            IntAct:Q8LFV3 STRING:Q8LFV3 EnsemblPlants:AT3G47500.1 GeneID:823904
            KEGG:ath:AT3G47500 GeneFarm:4398 TAIR:At3g47500 eggNOG:NOG295870
            InParanoid:Q8LFV3 OMA:KDNETER PhylomeDB:Q8LFV3
            ProtClustDB:CLSN2915701 Genevestigator:Q8LFV3 GermOnline:AT3G47500
            Uniprot:Q8LFV3
        Length = 448

 Score = 245 (91.3 bits), Expect = 2.8e-20, P = 2.8e-20
 Identities = 37/55 (67%), Positives = 46/55 (83%)

Query:    20 LKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNT 74
             L CPRC+S  TKFCYYNNYN++QPRHFCK C+RYWT GG +RN+P+G G RK+ +
Sbjct:   110 LPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKS 164


>TAIR|locus:2164860 [details] [associations]
            symbol:CDF2 "cycling DOF factor 2" species:3702
            "Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0048510 "regulation of timing
            of transition from vegetative to reproductive phase" evidence=IMP]
            InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
            PROSITE:PS50884 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000239772 EMBL:AB012243
            EMBL:AY056804 EMBL:BT015791 IPI:IPI00544938 RefSeq:NP_568567.1
            RefSeq:NP_851106.1 UniGene:At.26292 IntAct:Q93ZL5 STRING:Q93ZL5
            PRIDE:Q93ZL5 EnsemblPlants:AT5G39660.1 EnsemblPlants:AT5G39660.2
            GeneID:833962 KEGG:ath:AT5G39660 GeneFarm:4475 TAIR:At5g39660
            eggNOG:NOG255195 InParanoid:Q93ZL5 OMA:ANFHESS PhylomeDB:Q93ZL5
            ProtClustDB:CLSN2689899 Genevestigator:Q93ZL5 GermOnline:AT5G39660
            Uniprot:Q93ZL5
        Length = 457

 Score = 245 (91.3 bits), Expect = 3.0e-20, P = 3.0e-20
 Identities = 37/55 (67%), Positives = 45/55 (81%)

Query:    20 LKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNT 74
             L CPRC S  TKFCYYNNYN++QPRHFCK C+RYWT GG +RN+P+G G RK+ +
Sbjct:   138 LPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKS 192


>TAIR|locus:2154079 [details] [associations]
            symbol:CDF1 "AT5G62430" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS;IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0048510 "regulation of timing of transition from
            vegetative to reproductive phase" evidence=IMP] [GO:0009658
            "chloroplast organization" evidence=IMP] InterPro:IPR003851
            Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
            GO:GO:0006351 GO:GO:0009658 GO:GO:0048510 EMBL:AB015469
            EMBL:AB231333 EMBL:AF446362 EMBL:AY143830 IPI:IPI00525269
            IPI:IPI00529068 RefSeq:NP_201049.3 UniGene:At.9300 IntAct:Q8W1E3
            STRING:Q8W1E3 EnsemblPlants:AT5G62430.1 GeneID:836364
            KEGG:ath:AT5G62430 GeneFarm:4477 TAIR:At5g62430 eggNOG:NOG237530
            HOGENOM:HOG000239772 InParanoid:Q8W1E3 KO:K16222 OMA:ARIENND
            PhylomeDB:Q8W1E3 ProtClustDB:CLSN2920562 Genevestigator:Q8W1E3
            GermOnline:AT5G62430 Uniprot:Q8W1E3
        Length = 298

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 37/53 (69%), Positives = 44/53 (83%)

Query:    20 LKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKS 72
             L CPRC S  TKFCYYNNYN++QPRHFCK C+RYWT GG +R++PIG G RK+
Sbjct:    54 LPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKN 106


>TAIR|locus:2133149 [details] [associations]
            symbol:ATDOF4.2 "AT4G21030" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0010214 "seed coat development" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0048359 "mucilage metabolic process involved seed coat
            development" evidence=IMP] [GO:0048825 "cotyledon development"
            evidence=IMP] [GO:2000032 "regulation of secondary shoot formation"
            evidence=IMP] InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478
            PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634 GO:GO:0045893
            EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554
            GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
            GO:GO:0006351 GO:GO:0048825 EMBL:AB493687 IPI:IPI00542373
            PIR:T10645 RefSeq:NP_193835.1 UniGene:At.54449
            EnsemblPlants:AT4G21030.1 GeneID:827850 KEGG:ath:AT4G21030
            GeneFarm:4467 TAIR:At4g21030 eggNOG:NOG254967 HOGENOM:HOG000097076
            OMA:QPRYKCK PhylomeDB:Q9SUB1 ProtClustDB:CLSN2685338
            Genevestigator:Q9SUB1 GO:GO:0048359 GO:GO:2000032 Uniprot:Q9SUB1
        Length = 194

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 33/55 (60%), Positives = 37/55 (67%)

Query:    22 CPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKK 76
             CPRC S  T+F Y+NN   SQPR+ CKNC R WT GG LRNIP+ G   KSN  K
Sbjct:    23 CPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPVTGICDKSNLPK 77


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.130   0.402    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      250       220   0.00094  112 3  11 23  0.45    33
                                                     32  0.40    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  34
  No. of states in DFA:  596 (63 KB)
  Total size of DFA:  191 KB (2108 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.10u 0.18s 25.28t   Elapsed:  00:00:01
  Total cpu time:  25.10u 0.18s 25.28t   Elapsed:  00:00:01
  Start:  Mon May 20 17:19:03 2013   End:  Mon May 20 17:19:04 2013

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