BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046550
DVSPRKYGGLSYSTENVGQVLAISSAKLKMLLVLSIPLLTSYIAMLSGFSRALLINCASV
MKNVLSVSIITGLFLLQNRAVSLTKTAGPAVGGAIFSWSQKRQDAGFLPVLGLIS

High Scoring Gene Products

Symbol, full name Information P value
ZIFL2
AT3G43790
protein from Arabidopsis thaliana 5.5e-17
ZIF1
AT5G13740
protein from Arabidopsis thaliana 1.4e-14
ZIFL1
AT5G13750
protein from Arabidopsis thaliana 1.2e-12

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046550
        (115 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2101109 - symbol:ZIFL2 "AT3G43790" species:370...   216  5.5e-17   1
TAIR|locus:2173254 - symbol:ZIF1 "zinc induced facilitato...   194  1.4e-14   1
TAIR|locus:2177105 - symbol:ZIFL1 "zinc induced facilitat...   176  1.2e-12   1


>TAIR|locus:2101109 [details] [associations]
            symbol:ZIFL2 "AT3G43790" species:3702 "Arabidopsis
            thaliana" [GO:0005351 "sugar:hydrogen symporter activity"
            evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISM]
            [GO:0015144 "carbohydrate transmembrane transporter activity"
            evidence=ISS] [GO:0016020 "membrane" evidence=ISS] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0055085 "transmembrane
            transport" evidence=IEA] [GO:0009624 "response to nematode"
            evidence=IEP] InterPro:IPR011701 Pfam:PF07690 PROSITE:PS01022
            PROSITE:PS01023 GO:GO:0016021 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0055085 GO:GO:0009624
            InterPro:IPR016196 SUPFAM:SSF103473 InterPro:IPR020846
            PROSITE:PS50850 EMBL:AL162691 EMBL:BT030378 IPI:IPI00526833
            IPI:IPI00528097 PIR:T47415 RefSeq:NP_189965.2 RefSeq:NP_974382.1
            RefSeq:NP_974383.1 UniGene:At.36230 ProteinModelPortal:Q3EAQ5
            STRING:Q3EAQ5 PaxDb:Q3EAQ5 PRIDE:Q3EAQ5 EnsemblPlants:AT3G43790.2
            EnsemblPlants:AT3G43790.3 GeneID:823490 KEGG:ath:AT3G43790
            TAIR:At3g43790 eggNOG:NOG309217 HOGENOM:HOG000242165
            InParanoid:Q3EAQ5 OMA:YSIMASI PhylomeDB:Q3EAQ5
            ProtClustDB:CLSN2680885 Genevestigator:Q3EAQ5 Uniprot:Q3EAQ5
        Length = 484

 Score = 216 (81.1 bits), Expect = 5.5e-17, P = 5.5e-17
 Identities = 51/102 (50%), Positives = 70/102 (68%)

Query:    26 AKLKMLLVLSIPLLTSY--IAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAV-- 81
             A +++  VL IPLL+ Y  IA+LSG +  L+INCAS++KN LS+S++TGLF++ N+AV  
Sbjct:   348 AVIRLSAVLLIPLLSCYPYIALLSGVTLHLVINCASIIKNALSISLVTGLFIMLNKAVPQ 407

Query:    82 ---------SLT-----KTAGPAVGGAIFSWSQKRQDAGFLP 109
                      S+T     K+ GPA GG +FSW+QKRQDA FLP
Sbjct:   408 NQRGAANGISMTAMSVFKSFGPAGGGVLFSWAQKRQDATFLP 449

 Score = 111 (44.1 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 35/88 (39%), Positives = 50/88 (56%)

Query:     2 VSPRKYGGLSYSTENVGQVLAISSAKLKMLLVLSIPLLTSYIAMLS--GFSRALLINCAS 59
             VS R YGGLS+S+++VG+VLAIS   L +  +L  P L   + +L+    S  LLI   S
Sbjct:   303 VSDRSYGGLSFSSQDVGEVLAISGLGLLVFQLLVYPPLEKSVGLLAVIRLSAVLLIPLLS 362

Query:    60 VMKNVLSVSIITGLFLLQNRAVSLTKTA 87
                 +  +S +T L L+ N A S+ K A
Sbjct:   363 CYPYIALLSGVT-LHLVINCA-SIIKNA 388


>TAIR|locus:2173254 [details] [associations]
            symbol:ZIF1 "zinc induced facilitator 1" species:3702
            "Arabidopsis thaliana" [GO:0005215 "transporter activity"
            evidence=IEA] [GO:0005351 "sugar:hydrogen symporter activity"
            evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISM;IEA]
            [GO:0015144 "carbohydrate transmembrane transporter activity"
            evidence=ISS] [GO:0016020 "membrane" evidence=ISS] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0055085 "transmembrane
            transport" evidence=IEA] [GO:0009624 "response to nematode"
            evidence=IEP] [GO:0009705 "plant-type vacuole membrane"
            evidence=IDA] [GO:0010043 "response to zinc ion" evidence=IEP]
            [GO:0055069 "zinc ion homeostasis" evidence=IMP] InterPro:IPR001958
            InterPro:IPR011701 Pfam:PF07690 PRINTS:PR01035 GO:GO:0016021
            GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0010043
            GO:GO:0055085 GO:GO:0009624 GO:GO:0005215 EMBL:AB006704
            GO:GO:0009705 InterPro:IPR016196 SUPFAM:SSF103473 GO:GO:0055069
            EMBL:AB011484 InterPro:IPR020846 PROSITE:PS50850 eggNOG:NOG309217
            HOGENOM:HOG000242165 EMBL:AY092979 EMBL:AY128800 IPI:IPI00516862
            RefSeq:NP_196878.2 UniGene:At.44340 ProteinModelPortal:Q8RWN2
            STRING:Q8RWN2 PRIDE:Q8RWN2 EnsemblPlants:AT5G13740.1 GeneID:831219
            KEGG:ath:AT5G13740 TAIR:At5g13740 InParanoid:Q8RWN2 OMA:MIFAIMP
            PhylomeDB:Q8RWN2 Genevestigator:Q8RWN2 Uniprot:Q8RWN2
        Length = 486

 Score = 194 (73.4 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 49/94 (52%), Positives = 60/94 (63%)

Query:    34 LSIPLLTSY--IAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAV---------- 81
             L IP+  SY  IA LSG S +L++NCAS++ NVLSVS ITGL +LQNRAV          
Sbjct:   363 LMIPIQMSYPFIAGLSGLSLSLMLNCASILINVLSVSAITGLLILQNRAVDQSQRGAANG 422

Query:    82 ------SLTKTAGPAVGGAIFSWSQKRQDAGFLP 109
                   SL KT GPA  G +FSWS++R +A FLP
Sbjct:   423 IAMTAMSLFKTVGPAGAGILFSWSERRLNAAFLP 456

 Score = 106 (42.4 bits), Expect = 4.4e-05, P = 4.4e-05
 Identities = 26/55 (47%), Positives = 33/55 (60%)

Query:     3 SPRKYGGLSYSTENVGQVLAISSAKLKMLLVLSIPLLTSYIA--MLSGFSRALLI 55
             SPRKYGGLSYST  VG VLAIS   L    V   PL    +   +++ ++ AL+I
Sbjct:   311 SPRKYGGLSYSTNEVGTVLAISGLGLFSFQVFVYPLAEKLLGPVLVTRYAGALMI 365


>TAIR|locus:2177105 [details] [associations]
            symbol:ZIFL1 "zinc induced facilitator-like 1"
            species:3702 "Arabidopsis thaliana" [GO:0005215 "transporter
            activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0016021 "integral to membrane" evidence=IEA] [GO:0055085
            "transmembrane transport" evidence=IEA] [GO:0080167 "response to
            karrikin" evidence=IEP] InterPro:IPR001958 InterPro:IPR011701
            Pfam:PF07690 PRINTS:PR01035 GO:GO:0016021 GO:GO:0005886
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0055085 GO:GO:0005215
            GO:GO:0080167 InterPro:IPR016196 SUPFAM:SSF103473 EMBL:AB011484
            InterPro:IPR020846 PROSITE:PS50850 eggNOG:NOG309217
            HOGENOM:HOG000242165 EMBL:AY039542 EMBL:AY062867 EMBL:AY102150
            EMBL:AK318697 EMBL:AY086758 EMBL:AK221880 IPI:IPI00525646
            IPI:IPI00540772 IPI:IPI00657118 IPI:IPI00971349
            RefSeq:NP_001031877.1 RefSeq:NP_568290.3 RefSeq:NP_851036.1
            UniGene:At.19822 ProteinModelPortal:Q94BZ1 STRING:Q94BZ1
            EnsemblPlants:AT5G13750.1 GeneID:831220 KEGG:ath:AT5G13750
            TAIR:At5g13750 InParanoid:Q94BZ1 OMA:NILMNEA PhylomeDB:Q94BZ1
            ProtClustDB:CLSN2679920 Genevestigator:Q94BZ1 Uniprot:Q94BZ1
        Length = 478

 Score = 176 (67.0 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 49/116 (42%), Positives = 63/116 (54%)

Query:    11 SYSTENVGQVLAIS-SAKLKMLLVLSIPLLTSYIAMLSGFSRALLINCASVMKNVLSVSI 69
             SY+   +G ++    S  L M+++   PL    IA LSG +  + +  ASV K+VL  S 
Sbjct:   337 SYAERLLGPIIVTRISGSLAMVVLSCYPL----IAKLSGLALTVTVTSASVAKSVLGTSA 392

Query:    70 ITGLFLLQNRAV----------------SLTKTAGPAVGGAIFSWSQKRQDAGFLP 109
             ITGLF+LQN+AV                SL K  GPA  G IFSWS+KRQ A FLP
Sbjct:   393 ITGLFILQNKAVRQDQRGAANGIAMTAMSLFKAIGPAAAGIIFSWSEKRQGAAFLP 448


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.373    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      115       115   0.00091  102 3  11 22  0.44    30
                                                     29  0.45    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  500 (53 KB)
  Total size of DFA:  97 KB (2070 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.97u 0.17s 11.14t   Elapsed:  00:00:01
  Total cpu time:  10.97u 0.17s 11.14t   Elapsed:  00:00:01
  Start:  Mon May 20 17:20:27 2013   End:  Mon May 20 17:20:28 2013

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