BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 046550
         (115 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q3EAQ5|PTR36_ARATH Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis
           thaliana GN=ZIFL2 PE=2 SV=2
          Length = 484

 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/147 (44%), Positives = 90/147 (61%), Gaps = 39/147 (26%)

Query: 2   VSPRKYGGLSYSTENVGQVLAISS---------------------AKLKMLLVLSIPLLT 40
           VS R YGGLS+S+++VG+VLAIS                      A +++  VL IPLL+
Sbjct: 303 VSDRSYGGLSFSSQDVGEVLAISGLGLLVFQLLVYPPLEKSVGLLAVIRLSAVLLIPLLS 362

Query: 41  SY--IAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAV----------------S 82
            Y  IA+LSG +  L+INCAS++KN LS+S++TGLF++ N+AV                S
Sbjct: 363 CYPYIALLSGVTLHLVINCASIIKNALSISLVTGLFIMLNKAVPQNQRGAANGISMTAMS 422

Query: 83  LTKTAGPAVGGAIFSWSQKRQDAGFLP 109
           + K+ GPA GG +FSW+QKRQDA FLP
Sbjct: 423 VFKSFGPAGGGVLFSWAQKRQDATFLP 449


>sp|Q8RWN2|ZIF1_ARATH Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1
           PE=1 SV=2
          Length = 486

 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/146 (43%), Positives = 77/146 (52%), Gaps = 39/146 (26%)

Query: 3   SPRKYGGLSYSTENVGQVLAISSAKLKMLLVLSIPLLTSYIA--MLSGFSRALLI----- 55
           SPRKYGGLSYST  VG VLAIS   L    V   PL    +   +++ ++ AL+I     
Sbjct: 311 SPRKYGGLSYSTNEVGTVLAISGLGLFSFQVFVYPLAEKLLGPVLVTRYAGALMIPIQMS 370

Query: 56  ----------------NCASVMKNVLSVSIITGLFLLQNRAV----------------SL 83
                           NCAS++ NVLSVS ITGL +LQNRAV                SL
Sbjct: 371 YPFIAGLSGLSLSLMLNCASILINVLSVSAITGLLILQNRAVDQSQRGAANGIAMTAMSL 430

Query: 84  TKTAGPAVGGAIFSWSQKRQDAGFLP 109
            KT GPA  G +FSWS++R +A FLP
Sbjct: 431 FKTVGPAGAGILFSWSERRLNAAFLP 456


>sp|Q94BZ1|ZIFL1_ARATH Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana
           GN=ZIFL1 PE=2 SV=1
          Length = 478

 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 74/150 (49%), Gaps = 47/150 (31%)

Query: 3   SPRKYGGLSYSTENVGQVLAIS---------------------------SAKLKMLLVLS 35
           SPRKYGGL YST +VG VLA S                           S  L M+++  
Sbjct: 303 SPRKYGGLGYSTADVGSVLAFSGFGLLIFQLSLYSYAERLLGPIIVTRISGSLAMVVLSC 362

Query: 36  IPLLTSYIAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAV-------------- 81
            PL    IA LSG +  + +  ASV K+VL  S ITGLF+LQN+AV              
Sbjct: 363 YPL----IAKLSGLALTVTVTSASVAKSVLGTSAITGLFILQNKAVRQDQRGAANGIAMT 418

Query: 82  --SLTKTAGPAVGGAIFSWSQKRQDAGFLP 109
             SL K  GPA  G IFSWS+KRQ A FLP
Sbjct: 419 AMSLFKAIGPAAAGIIFSWSEKRQGAAFLP 448


>sp|Q6UJY2|SL9C1_MOUSE Sodium/hydrogen exchanger 10 OS=Mus musculus GN=Slc9c1 PE=1 SV=3
          Length = 1175

 Score = 32.3 bits (72), Expect = 0.88,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)

Query: 31  LLVLSIPLLTSYIAMLSGFSRAL--LINCASVMKNVLSVSIITGLFLLQNRAVSLTKTAG 88
           +L+ S P+LTS      G SR+L  LIN  S++ +VLS+ I +G+  ++ ++ S+  T  
Sbjct: 167 VLISSDPMLTSASIRDLGLSRSLTNLINGESLLTSVLSLVIYSGVVHIRFKSKSVNHTLA 226

Query: 89  PAVGGAIFSW 98
             V    +S+
Sbjct: 227 HKVMSTAWSY 236


>sp|Q18CS5|PYRE_CLOD6 Orotate phosphoribosyltransferase OS=Clostridium difficile (strain
           630) GN=pyrE PE=3 SV=1
          Length = 194

 Score = 30.8 bits (68), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 19/73 (26%), Positives = 33/73 (45%)

Query: 31  LLVLSIPLLTSYIAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAVSLTKTAGPA 90
           +L  S  LL  +  + SG      + CA V++     + +    + Q + + +    GPA
Sbjct: 9   ILKKSDALLEGHFLLSSGKHSNRYVQCAKVLRFPEYAAEVLSTVVEQIKDLDIDLVVGPA 68

Query: 91  VGGAIFSWSQKRQ 103
           +GG I S+   RQ
Sbjct: 69  MGGVIVSYELGRQ 81


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.135    0.373 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,677,283
Number of Sequences: 539616
Number of extensions: 1020990
Number of successful extensions: 3387
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3377
Number of HSP's gapped (non-prelim): 12
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)