BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046553
(232 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VCH|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VG8|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
Length = 480
Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 115/220 (52%), Gaps = 14/220 (6%)
Query: 11 GENRSTVDDDEQCLKWLDSWEPWSVIYACLGSICGLATWQXXXXXXXXXASSQPFIWVIR 70
G+ + ++ +CLKWLD+ SV+Y GS L Q S Q F+WVIR
Sbjct: 246 GKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIR 305
Query: 71 GGE----------RSQGLEKWIQEEGLEERAKGRGFIIRGWAPQVLLLSHRAIGGFLTHC 120
SQ G ER K RGF+I WAPQ +L+H + GGFLTHC
Sbjct: 306 SPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHC 365
Query: 121 GWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGL--VIKREKVKEAIE 178
GWNSTLE V +G+PL+ PL+AEQ N L + + L ++G +++RE+V ++
Sbjct: 366 GWNSTLESVVSGIPLIAWPLYAEQKMNAVL-LSEDIRAALRPRAGDDGLVRREEVARVVK 424
Query: 179 KLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEML 218
LM+ G++G+ R + ++L E A R +S + + ++
Sbjct: 425 GLME-GEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLV 463
>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C1Z|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C9Z|A Chain A, Structure And Activity Of A Flavonoid 3-0
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
Length = 456
Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 106/212 (50%), Gaps = 20/212 (9%)
Query: 16 TVDDDEQCLKWLDSWEPWSVIYACLGSICGLATWQXXXXXXXXXASSQPFIWVIRGGERS 75
V + CL+WL +P SV+Y G++ + AS PFIW +R R
Sbjct: 254 VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKARV 313
Query: 76 QGLEKWIQEEGLEERAKGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPL 135
EG E+ +G G ++ WAPQ +L+H A+G F+THCGWNS E V+ GVPL
Sbjct: 314 H------LPEGFLEKTRGYGMVVP-WAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPL 366
Query: 136 VTRPLFAEQFYN-----DKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKR 190
+ RP F +Q N D L + + G+ KSGL+ ++++ + K G+K
Sbjct: 367 ICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLM-------SCFDQILSQEK-GKKL 418
Query: 191 RKRTRQLGEIANRATGVGASSHRNMEMLIEFV 222
R+ R L E A+RA G SS N L++ V
Sbjct: 419 RENLRALRETADRAVGPKGSSTENFITLVDLV 450
>pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp
pdb|3HBJ|A Chain A, Structure Of Ugt78g1 Complexed With Udp
Length = 454
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 17 VDDDEQCLKWLDSWEPWSVIYACLGSICGLATWQXXXXXXXXXASSQPFIWVIRGGERSQ 76
V D+ CL+WLD E SV+Y GS+ + PFIW RG + +
Sbjct: 257 VSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPKEK 316
Query: 77 GLEKWIQEEGLEERAKGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLV 136
+G ER K +G I+ WAPQV +L H ++G FLTH GWNS LE + GVP++
Sbjct: 317 ------LPKGFLERTKTKGKIV-AWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMI 369
Query: 137 TRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQ 196
+RP F +Q N L ++ + G+ +G V+ +E +K+A+E M K G R+K +
Sbjct: 370 SRPFFGDQGLNTILT-ESVLEIGVGVDNG-VLTKESIKKALELTMSSEKGGIMRQKIVK- 426
Query: 197 LGEIANRATGVGASSHRNMEMLIEFV 222
L E A +A +S + LI+ V
Sbjct: 427 LKESAFKAVEQNGTSAMDFTTLIQIV 452
>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights
Into The Structural Basis Of A Multifunctional (Iso)
Flavonoid Glycosyltransferase
Length = 482
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 7/207 (3%)
Query: 19 DDEQCLKWLDSWEPWSVIYACLGSICGLATWQXXXXXXXXXASSQPFIWVIRGGERSQGL 78
+D +CL WL+S EP SV+Y GS + Q + F+W+IR G
Sbjct: 281 EDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGS 340
Query: 79 EKWIQEEGLEERAKGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTR 138
+ E E +G +I W PQ +L+H +IGGFLTHCGWNST E + AGVP++
Sbjct: 341 VIFSSEFTNEIADRG---LIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCW 397
Query: 139 PLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLG 198
P FA+Q + + W + + +KRE++ + I +++ G +G+K +++ +L
Sbjct: 398 PFFADQPTDCRFICNE---WEIGMEIDTNVKREELAKLINEVI-AGDKGKKMKQKAMELK 453
Query: 199 EIANRATGVGASSHRNMEMLIEFVIQR 225
+ A T G S+ N+ +I+ V+ +
Sbjct: 454 KKAEENTRPGGCSYMNLNKVIKDVLLK 480
>pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
pdb|2ACV|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1
Length = 463
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 26/223 (11%)
Query: 10 RGENRSTVDDDEQ--CLKWLDSWEPWSVIYACLGSI-CGLATWQXXXXXXXXXASSQPFI 66
+G+ +D + LKWLD SV++ C GS+ Q S F+
Sbjct: 251 KGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFL 310
Query: 67 WVIRGGERSQGLEKWIQEEGLEE--RAKGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNS 124
W S EK + EG E +G+G +I GWAPQV +L+H+AIGGF++HCGWNS
Sbjct: 311 W-------SNSAEKKVFPEGFLEWMELEGKG-MICGWAPQVEVLAHKAIGGFVSHCGWNS 362
Query: 125 TLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGL-------EDKSGLVIKREKVKEAI 177
LE + GVP++T P++AEQ N A + WG+ K V+ E++++ +
Sbjct: 363 ILESMWFGVPILTWPIYAEQQLN---AFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGL 419
Query: 178 EKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIE 220
+ LMD+ K+ +++ E++ A G SS ++ LI+
Sbjct: 420 KDLMDKDS---IVHKKVQEMKEMSRNAVVDGGSSLISVGKLID 459
>pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
pdb|2ACW|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
Length = 465
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 26/223 (11%)
Query: 10 RGENRSTVDDDEQ--CLKWLDSWEPWSVIYACLGSI-CGLATWQXXXXXXXXXASSQPFI 66
+G+ +D + LKWLD SV++ C GS+ Q S F+
Sbjct: 251 KGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFL 310
Query: 67 WVIRGGERSQGLEKWIQEEGLEE--RAKGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNS 124
W S EK + EG E +G+G +I GWAPQV +L+H+AIGGF++HCGWNS
Sbjct: 311 W-------SNSAEKKVFPEGFLEWMELEGKG-MICGWAPQVEVLAHKAIGGFVSHCGWNS 362
Query: 125 TLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGL-------EDKSGLVIKREKVKEAI 177
LE + GVP++T P++AEQ N A + WG+ K V+ E++++ +
Sbjct: 363 ILESMWFGVPILTWPIYAEQQLN---AFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGL 419
Query: 178 EKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIE 220
+ LMD+ K+ +++ E++ A G SS ++ LI+
Sbjct: 420 KDLMDKDS---IVHKKVQEMKEMSRNAVVDGGSSLISVGKLID 459
>pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
pdb|2O6L|B Chain B, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
Length = 170
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 25/47 (53%)
Query: 101 WAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYN 147
W PQ LL H F+TH G N E + G+P V PLFA+Q N
Sbjct: 75 WIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPXVGIPLFADQPDN 121
>pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYA|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 424
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 98 IRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVT 157
+ W PQ+ +L+ + F+TH G ST+E +S VP+V P AEQ N + V+ +
Sbjct: 309 VHQWVPQLDILTKAS--AFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLG 366
Query: 158 WGLEDKSGLVIKREKVKEAI 177
+ + EK++EA+
Sbjct: 367 RHIPRDQ---VTAEKLREAV 383
>pdb|2IYF|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYF|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 430
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 98 IRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKL 150
+ W PQ+ +L R F+TH G + EG++ P++ P +QF N +
Sbjct: 287 VHDWVPQLAIL--RQADLFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADM 337
>pdb|3IA7|A Chain A, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
pdb|3IA7|B Chain B, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
Length = 402
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 16/86 (18%)
Query: 101 WAPQVLLLSH-RAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWG 159
W P +L+H RA LTH + LE +AGVPLV P FA + + + + G
Sbjct: 288 WIPFHSVLAHARAC---LTHGTTGAVLEAFAAGVPLVLVPHFATE---AAPSAERVIELG 341
Query: 160 LEDKSGLVIKREK-----VKEAIEKL 180
L G V++ ++ ++EA+E+L
Sbjct: 342 L----GSVLRPDQLEPASIREAVERL 363
>pdb|2Y2W|A Chain A, Elucidation Of The Substrate Specificity And Protein
Structure Of Abfb, A Family 51
Alpha-L-Arabinofuranosidase From Bifidobacterium Longum.
pdb|2Y2W|B Chain B, Elucidation Of The Substrate Specificity And Protein
Structure Of Abfb, A Family 51
Alpha-L-Arabinofuranosidase From Bifidobacterium Longum.
pdb|2Y2W|C Chain C, Elucidation Of The Substrate Specificity And Protein
Structure Of Abfb, A Family 51
Alpha-L-Arabinofuranosidase From Bifidobacterium Longum.
pdb|2Y2W|D Chain D, Elucidation Of The Substrate Specificity And Protein
Structure Of Abfb, A Family 51
Alpha-L-Arabinofuranosidase From Bifidobacterium Longum.
pdb|2Y2W|E Chain E, Elucidation Of The Substrate Specificity And Protein
Structure Of Abfb, A Family 51
Alpha-L-Arabinofuranosidase From Bifidobacterium Longum.
pdb|2Y2W|F Chain F, Elucidation Of The Substrate Specificity And Protein
Structure Of Abfb, A Family 51
Alpha-L-Arabinofuranosidase From Bifidobacterium Longum
Length = 574
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 131 AGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVI 168
A P ++ P + Y D A+ A VTW + ++GL++
Sbjct: 445 AYAPAISSPTIHTEAYGDVPAIDAVVTWDEQARTGLLL 482
>pdb|3OTG|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp Bound Form
pdb|3OTH|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i
Bound Form
pdb|3OTH|B Chain B, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i
Bound Form
Length = 412
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 98 IRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQF 145
+ W PQ LL H + + H G +TL + AGVP ++ P + F
Sbjct: 296 LESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSF 341
>pdb|3USZ|A Chain A, Crystal Structure Of Truncated Exo-1,31,4-Beta-Glucanase
(Exop) From Pseudoalteromonas Sp. Bb1
pdb|3UT0|A Chain A, Crystal Structure Of Exo-1,31,4-Beta-Glucanase (Exop) From
Pseudoalteromonas Sp. Bb1
pdb|3UT0|B Chain B, Crystal Structure Of Exo-1,31,4-Beta-Glucanase (Exop) From
Pseudoalteromonas Sp. Bb1
pdb|3UT0|C Chain C, Crystal Structure Of Exo-1,31,4-Beta-Glucanase (Exop) From
Pseudoalteromonas Sp. Bb1
pdb|3UT0|D Chain D, Crystal Structure Of Exo-1,31,4-Beta-Glucanase (Exop) From
Pseudoalteromonas Sp. Bb1
Length = 822
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 50/110 (45%), Gaps = 21/110 (19%)
Query: 72 GERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSA 131
G+R G +K + + L+ + GF++ W +H+ F+ C + ++A
Sbjct: 267 GKRVHG-DKHLLTDVLKNQLGFDGFVVSDWN------AHK----FVEGCDLEQCAQAINA 315
Query: 132 GVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLM 181
GV ++ P E FY++ + + K+G VI ++ +A+ + +
Sbjct: 316 GVDVIMVPEHFEAFYHNTVK---------QVKAG-VIAESRINDAVRRFL 355
>pdb|3RRX|A Chain A, Crystal Structure Of Q683a Mutant Of
Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas
Sp. Bb1
Length = 822
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 50/110 (45%), Gaps = 21/110 (19%)
Query: 72 GERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSA 131
G+R G +K + + L+ + GF++ W +H+ F+ C + ++A
Sbjct: 267 GKRVHG-DKHLLTDVLKNQLGFDGFVVSDWN------AHK----FVEGCDLEQCAQAINA 315
Query: 132 GVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLM 181
GV ++ P E FY++ + + K+G VI ++ +A+ + +
Sbjct: 316 GVDVIMVPEHFEAFYHNTVK---------QVKAG-VIAESRINDAVRRFL 355
>pdb|1J5T|A Chain A, Crystal Structure Of Indole-3-glycerol Phosphate Synthase
(tm0140) From Thermotoga Maritima At 3.0 A Resolution
Length = 242
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 129 VSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKR----EKVKEAIE 178
V A L RP+ A+ FY D + V+ A + G + + L+I R E++KE E
Sbjct: 84 VRAARNLTCRPILAKDFYIDTVQVKLASSVGAD--AILIIARILTAEQIKEIYE 135
>pdb|1I4N|A Chain A, Crystal Structure Of Indoleglycerol Phosphate Synthase
From Thermotoga Maritima
pdb|1I4N|B Chain B, Crystal Structure Of Indoleglycerol Phosphate Synthase
From Thermotoga Maritima
Length = 251
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 129 VSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKR----EKVKEAIE 178
V A L RP+ A+ FY D + V+ A + G + + L+I R E++KE E
Sbjct: 93 VRAARNLTCRPILAKDFYIDTVQVKLASSVGAD--AILIIARILTAEQIKEIYE 144
>pdb|3NYZ|A Chain A, Crystal Structure Of Kemp Elimination Catalyst 1a53-2
pdb|3NYZ|B Chain B, Crystal Structure Of Kemp Elimination Catalyst 1a53-2
pdb|3NZ1|A Chain A, Crystal Structure Of Kemp Elimination Catalyst 1a53-2
Complexed With Transition State Analog 5-Nitro
Benzotriazole
Length = 261
Score = 26.9 bits (58), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 186 QGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQRTRGQ 229
QG R +L ++ A G+G+S RN E + EF++ G+
Sbjct: 211 QGISERNEIEELRKLGVNAFGIGSSLMRNPEKIKEFILGSIEGR 254
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,738,068
Number of Sequences: 62578
Number of extensions: 258494
Number of successful extensions: 656
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 635
Number of HSP's gapped (non-prelim): 20
length of query: 232
length of database: 14,973,337
effective HSP length: 96
effective length of query: 136
effective length of database: 8,965,849
effective search space: 1219355464
effective search space used: 1219355464
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)