Query 046553
Match_columns 232
No_of_seqs 127 out of 1144
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 13:16:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046553.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046553hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03015 UDP-glucosyl transfer 100.0 3.5E-41 7.5E-46 305.8 21.4 203 19-222 253-466 (470)
2 PLN00164 glucosyltransferase; 100.0 4.5E-41 9.8E-46 307.5 21.8 206 19-225 258-474 (480)
3 PLN02992 coniferyl-alcohol glu 100.0 7.2E-41 1.6E-45 304.9 22.0 202 19-224 249-469 (481)
4 PLN02173 UDP-glucosyl transfer 100.0 5.8E-41 1.2E-45 303.7 21.0 196 19-223 250-447 (449)
5 PLN02534 UDP-glycosyltransfera 100.0 1E-40 2.2E-45 304.9 22.5 211 19-229 269-491 (491)
6 PLN02410 UDP-glucoronosyl/UDP- 100.0 1.4E-40 3.1E-45 301.8 21.1 197 20-224 251-450 (451)
7 PLN02207 UDP-glycosyltransfera 100.0 1.4E-40 3E-45 302.4 20.9 200 19-224 261-465 (468)
8 PLN02863 UDP-glucoronosyl/UDP- 100.0 1.6E-40 3.4E-45 303.5 20.8 203 19-226 269-473 (477)
9 PLN03007 UDP-glucosyltransfera 100.0 2.1E-40 4.5E-45 303.8 21.3 203 20-224 272-480 (482)
10 PLN02210 UDP-glucosyl transfer 100.0 2.7E-40 5.8E-45 300.7 21.4 198 19-223 255-454 (456)
11 PLN02764 glycosyltransferase f 100.0 3.6E-40 7.7E-45 298.2 21.8 205 20-230 244-451 (453)
12 PLN02555 limonoid glucosyltran 100.0 5.8E-40 1.3E-44 299.3 21.3 203 20-225 264-470 (480)
13 PLN03004 UDP-glycosyltransfera 100.0 3.4E-40 7.3E-45 298.9 17.9 188 20-213 257-450 (451)
14 PLN02554 UDP-glycosyltransfera 100.0 7.1E-40 1.5E-44 300.1 19.7 201 19-225 260-479 (481)
15 PLN02167 UDP-glycosyltransfera 100.0 1.2E-39 2.6E-44 298.2 20.7 203 19-226 266-474 (475)
16 PLN02152 indole-3-acetate beta 100.0 2.1E-39 4.5E-44 294.0 20.8 200 19-222 247-454 (455)
17 PLN00414 glycosyltransferase f 100.0 3E-39 6.6E-44 292.8 21.4 203 20-228 239-444 (446)
18 PLN02208 glycosyltransferase f 100.0 4.5E-39 9.6E-44 291.4 21.5 200 19-224 237-439 (442)
19 PLN02562 UDP-glycosyltransfera 100.0 7.3E-39 1.6E-43 290.9 20.5 186 19-222 259-447 (448)
20 PLN02670 transferase, transfer 100.0 1.4E-38 3E-43 289.6 20.9 200 21-226 266-467 (472)
21 PLN02448 UDP-glycosyltransfera 100.0 6.1E-38 1.3E-42 286.0 20.9 193 20-224 261-457 (459)
22 PF00201 UDPGT: UDP-glucoronos 100.0 5.3E-35 1.2E-39 269.1 14.7 181 20-226 263-445 (500)
23 PHA03392 egt ecdysteroid UDP-g 100.0 8E-33 1.7E-37 254.7 20.0 181 20-226 284-468 (507)
24 KOG1192 UDP-glucuronosyl and U 100.0 2.9E-29 6.2E-34 230.6 16.1 168 22-204 264-439 (496)
25 COG1819 Glycosyl transferases, 100.0 2.5E-27 5.4E-32 213.0 17.3 177 20-227 226-403 (406)
26 TIGR01426 MGT glycosyltransfer 99.9 1.9E-25 4E-30 199.9 17.5 173 24-222 216-389 (392)
27 cd03784 GT1_Gtf_like This fami 99.9 9.2E-25 2E-29 195.5 17.7 158 19-202 227-386 (401)
28 PRK12446 undecaprenyldiphospho 99.7 5.4E-17 1.2E-21 143.8 14.3 144 22-184 174-326 (352)
29 COG0707 MurG UDP-N-acetylgluco 99.7 3.1E-17 6.8E-22 145.0 12.4 150 32-198 182-339 (357)
30 PF04101 Glyco_tran_28_C: Glyc 99.7 3E-18 6.6E-23 136.1 -1.9 138 35-186 1-147 (167)
31 PF13528 Glyco_trans_1_3: Glyc 99.5 2E-13 4.4E-18 118.5 10.9 121 32-180 191-317 (318)
32 TIGR00661 MJ1255 conserved hyp 99.4 5.4E-13 1.2E-17 116.7 10.8 124 32-184 187-315 (321)
33 PRK00726 murG undecaprenyldiph 99.4 3.5E-12 7.7E-17 112.5 13.8 149 31-197 181-338 (357)
34 PRK13608 diacylglycerol glucos 99.4 1.2E-11 2.5E-16 111.1 15.4 157 23-199 192-354 (391)
35 cd03785 GT1_MurG MurG is an N- 99.4 1.2E-11 2.5E-16 108.5 13.1 156 26-197 174-338 (350)
36 PLN02605 monogalactosyldiacylg 99.3 4E-11 8.6E-16 107.2 15.6 159 20-196 193-361 (382)
37 PRK13609 diacylglycerol glucos 99.3 1.3E-10 2.8E-15 103.5 14.8 154 23-196 192-351 (380)
38 TIGR01133 murG undecaprenyldip 99.2 2.7E-10 5.9E-15 99.7 13.3 88 103-196 243-334 (348)
39 TIGR03590 PseG pseudaminic aci 99.1 8.6E-10 1.9E-14 94.8 10.6 105 33-150 170-278 (279)
40 TIGR00215 lpxB lipid-A-disacch 99.1 3.8E-09 8.3E-14 94.8 14.5 167 22-202 180-370 (385)
41 PRK00025 lpxB lipid-A-disaccha 99.0 1.2E-08 2.5E-13 90.7 13.8 162 22-201 175-359 (380)
42 TIGR03492 conserved hypothetic 98.9 2.5E-08 5.5E-13 89.8 15.0 139 31-184 203-365 (396)
43 KOG3349 Predicted glycosyltran 98.7 1.4E-07 3E-12 72.6 8.7 116 33-157 3-130 (170)
44 COG4671 Predicted glycosyl tra 98.6 4.8E-07 1E-11 78.7 12.1 137 31-184 217-366 (400)
45 cd03814 GT1_like_2 This family 98.5 6.2E-06 1.3E-10 71.2 15.9 142 33-198 196-347 (364)
46 cd03795 GT1_like_4 This family 98.4 3.2E-06 7E-11 73.4 12.2 146 34-200 191-349 (357)
47 PF00534 Glycos_transf_1: Glyc 98.3 7.1E-06 1.5E-10 64.5 11.0 148 32-196 13-171 (172)
48 cd03817 GT1_UGDG_like This fam 98.3 1.8E-05 3.9E-10 68.2 13.9 146 33-201 201-361 (374)
49 PLN02871 UDP-sulfoquinovose:DA 98.3 5.5E-05 1.2E-09 69.4 17.4 142 35-200 264-417 (465)
50 cd03823 GT1_ExpE7_like This fa 98.3 3.2E-05 6.9E-10 66.6 14.7 146 32-198 189-344 (359)
51 cd03794 GT1_wbuB_like This fam 98.3 2.6E-05 5.7E-10 67.4 13.9 146 32-199 218-381 (394)
52 cd03808 GT1_cap1E_like This fa 98.2 4.1E-05 8.8E-10 65.4 14.5 148 32-197 186-343 (359)
53 cd03820 GT1_amsD_like This fam 98.2 3E-05 6.5E-10 66.0 13.3 97 93-201 234-337 (348)
54 cd04946 GT1_AmsK_like This fam 98.2 6.2E-05 1.3E-09 68.0 15.6 99 93-200 288-394 (407)
55 cd03800 GT1_Sucrose_synthase T 98.2 5.4E-05 1.2E-09 66.8 15.1 94 93-198 282-383 (398)
56 cd05844 GT1_like_7 Glycosyltra 98.2 2.5E-05 5.4E-10 68.4 12.8 94 93-198 244-351 (367)
57 PRK15427 colanic acid biosynth 98.2 0.00013 2.8E-09 66.0 16.8 96 93-200 278-388 (406)
58 cd03801 GT1_YqgM_like This fam 98.2 0.00015 3.3E-09 61.8 16.1 92 92-195 254-353 (374)
59 cd03799 GT1_amsK_like This is 98.1 6.4E-05 1.4E-09 65.1 13.3 148 33-199 178-343 (355)
60 cd03786 GT1_UDP-GlcNAc_2-Epime 98.1 4.5E-05 9.7E-10 67.1 12.5 131 32-184 197-338 (363)
61 cd04962 GT1_like_5 This family 98.1 0.00018 3.9E-09 63.0 16.1 94 93-198 252-351 (371)
62 COG3980 spsG Spore coat polysa 98.1 6.2E-05 1.3E-09 64.0 12.3 142 33-196 158-302 (318)
63 cd03804 GT1_wbaZ_like This fam 98.1 3.4E-05 7.3E-10 67.6 11.2 136 37-195 198-339 (351)
64 PRK14089 ipid-A-disaccharide s 98.1 5.5E-05 1.2E-09 67.0 12.2 144 33-201 167-332 (347)
65 cd04949 GT1_gtfA_like This fam 98.1 4.8E-05 1E-09 67.1 11.7 100 93-201 260-363 (372)
66 cd03798 GT1_wlbH_like This fam 98.0 0.00058 1.2E-08 58.4 17.5 82 93-186 258-347 (377)
67 PRK15484 lipopolysaccharide 1, 98.0 0.00035 7.6E-09 62.5 16.2 92 93-196 256-356 (380)
68 TIGR00236 wecB UDP-N-acetylglu 98.0 0.00012 2.5E-09 65.0 13.0 129 33-184 197-335 (365)
69 cd03822 GT1_ecORF704_like This 98.0 0.00036 7.8E-09 60.3 15.4 97 93-200 246-351 (366)
70 PRK05749 3-deoxy-D-manno-octul 98.0 0.00026 5.6E-09 64.1 14.6 85 106-200 315-405 (425)
71 cd03807 GT1_WbnK_like This fam 98.0 0.00047 1E-08 59.1 15.6 94 93-199 250-348 (365)
72 cd03825 GT1_wcfI_like This fam 98.0 0.001 2.2E-08 57.7 17.9 95 93-199 243-346 (365)
73 TIGR03088 stp2 sugar transfera 98.0 0.00019 4.2E-09 63.3 13.3 93 94-198 255-353 (374)
74 PF13844 Glyco_transf_41: Glyc 98.0 0.00042 9E-09 63.5 15.5 147 32-195 283-442 (468)
75 COG5017 Uncharacterized conser 98.0 0.00011 2.3E-09 56.0 9.6 107 36-160 2-122 (161)
76 TIGR03449 mycothiol_MshA UDP-N 98.0 0.00045 9.8E-09 61.7 15.6 95 93-199 282-384 (405)
77 PRK10307 putative glycosyl tra 97.9 0.00072 1.6E-08 60.8 16.9 146 34-200 229-390 (412)
78 cd03819 GT1_WavL_like This fam 97.9 0.00045 9.8E-09 59.9 15.1 152 33-200 184-348 (355)
79 cd03811 GT1_WabH_like This fam 97.9 0.00026 5.6E-09 60.1 12.6 142 32-192 187-341 (353)
80 TIGR03087 stp1 sugar transfera 97.9 0.00068 1.5E-08 60.8 15.6 94 92-199 278-378 (397)
81 PRK09922 UDP-D-galactose:(gluc 97.9 0.00035 7.5E-09 61.8 13.4 148 34-200 180-343 (359)
82 cd03821 GT1_Bme6_like This fam 97.9 0.0007 1.5E-08 58.2 14.9 92 93-197 261-359 (375)
83 TIGR02149 glgA_Coryne glycogen 97.8 0.00093 2E-08 59.1 15.6 151 35-199 202-368 (388)
84 cd03805 GT1_ALG2_like This fam 97.8 0.00088 1.9E-08 59.3 14.0 93 93-198 279-379 (392)
85 cd03816 GT1_ALG1_like This fam 97.7 0.00077 1.7E-08 61.0 13.5 91 94-198 294-399 (415)
86 cd03812 GT1_CapH_like This fam 97.7 0.00098 2.1E-08 57.9 12.8 143 33-193 191-341 (358)
87 cd04951 GT1_WbdM_like This fam 97.7 0.0022 4.7E-08 55.6 14.6 77 93-183 244-326 (360)
88 COG1519 KdtA 3-deoxy-D-manno-o 97.6 0.004 8.6E-08 55.9 15.9 99 95-202 301-405 (419)
89 cd03818 GT1_ExpC_like This fam 97.6 0.0014 3E-08 58.7 13.1 98 93-200 280-383 (396)
90 cd03813 GT1_like_3 This family 97.6 0.0019 4.1E-08 59.5 14.2 96 93-200 353-459 (475)
91 cd03809 GT1_mtfB_like This fam 97.5 0.0019 4.1E-08 55.7 12.0 98 92-200 251-353 (365)
92 TIGR02472 sucr_P_syn_N sucrose 97.4 0.0058 1.3E-07 55.7 14.9 95 93-197 316-420 (439)
93 cd03792 GT1_Trehalose_phosphor 97.4 0.02 4.3E-07 50.7 17.5 159 23-198 180-352 (372)
94 cd04955 GT1_like_6 This family 97.4 0.0061 1.3E-07 52.9 13.9 139 37-198 196-345 (363)
95 PF13692 Glyco_trans_1_4: Glyc 97.4 0.00039 8.4E-09 52.3 5.2 79 93-183 52-135 (135)
96 PF02350 Epimerase_2: UDP-N-ac 97.2 0.0019 4.2E-08 57.3 8.8 128 31-183 178-318 (346)
97 TIGR02918 accessory Sec system 97.2 0.029 6.2E-07 52.3 16.4 103 93-201 375-484 (500)
98 cd03796 GT1_PIG-A_like This fa 97.2 0.046 1E-06 48.9 17.3 133 33-185 192-335 (398)
99 PRK15179 Vi polysaccharide bio 97.1 0.037 8.1E-07 53.5 17.1 96 93-198 573-674 (694)
100 PRK10017 colanic acid biosynth 97.1 0.035 7.5E-07 50.7 15.6 178 24-224 225-424 (426)
101 TIGR02468 sucrsPsyn_pln sucros 96.9 0.015 3.2E-07 58.2 12.7 98 93-200 547-654 (1050)
102 cd03802 GT1_AviGT4_like This f 96.8 0.031 6.7E-07 48.0 12.9 127 36-183 173-308 (335)
103 PF02684 LpxB: Lipid-A-disacch 96.8 0.049 1.1E-06 48.8 14.1 170 21-211 173-364 (373)
104 COG3914 Spy Predicted O-linked 96.8 0.087 1.9E-06 49.2 15.5 113 31-153 427-552 (620)
105 PRK09814 beta-1,6-galactofuran 96.8 0.01 2.2E-07 52.2 9.3 95 93-202 206-317 (333)
106 cd03791 GT1_Glycogen_synthase_ 96.6 0.048 1E-06 49.9 12.9 132 35-182 297-441 (476)
107 PRK14098 glycogen synthase; Pr 96.6 0.14 3.1E-06 47.5 15.9 129 35-181 308-449 (489)
108 TIGR02095 glgA glycogen/starch 96.4 0.17 3.7E-06 46.5 15.1 144 35-194 292-452 (473)
109 PRK15490 Vi polysaccharide bio 96.4 0.15 3.2E-06 48.1 14.5 63 93-161 454-522 (578)
110 PRK00654 glgA glycogen synthas 96.3 0.06 1.3E-06 49.5 11.8 144 23-182 271-427 (466)
111 TIGR03568 NeuC_NnaA UDP-N-acet 96.3 0.079 1.7E-06 47.3 11.9 142 22-182 190-338 (365)
112 PLN02275 transferase, transfer 96.2 0.048 1E-06 48.5 10.4 74 94-181 286-371 (371)
113 KOG4626 O-linked N-acetylgluco 96.2 0.1 2.3E-06 49.3 12.2 150 31-196 756-917 (966)
114 PLN02949 transferase, transfer 96.1 0.14 3.1E-06 47.2 13.1 95 93-200 334-440 (463)
115 PHA01633 putative glycosyl tra 96.1 0.4 8.6E-06 42.4 15.3 83 93-183 200-307 (335)
116 cd04950 GT1_like_1 Glycosyltra 95.9 0.3 6.5E-06 43.4 13.8 79 93-184 253-341 (373)
117 PRK01021 lpxB lipid-A-disaccha 95.9 0.44 9.6E-06 45.2 15.1 167 19-202 399-590 (608)
118 PF04007 DUF354: Protein of un 95.6 0.68 1.5E-05 41.0 14.6 138 19-182 166-309 (335)
119 COG0763 LpxB Lipid A disacchar 95.5 0.55 1.2E-05 42.0 13.5 180 19-221 174-378 (381)
120 PLN02316 synthase/transferase 95.4 1.1 2.3E-05 45.4 16.6 82 94-183 900-998 (1036)
121 PF13524 Glyco_trans_1_2: Glyc 95.2 0.13 2.9E-06 35.9 7.5 69 119-199 9-78 (92)
122 cd03806 GT1_ALG11_like This fa 95.2 0.16 3.5E-06 46.1 9.7 95 93-200 304-410 (419)
123 PLN00142 sucrose synthase 94.6 1.2 2.7E-05 43.8 14.4 72 116-197 670-750 (815)
124 TIGR02193 heptsyl_trn_I lipopo 94.6 0.27 5.9E-06 42.6 9.1 137 24-181 170-319 (319)
125 PLN02939 transferase, transfer 94.4 2.1 4.5E-05 43.0 15.5 93 93-193 836-945 (977)
126 PHA01630 putative group 1 glyc 94.3 2 4.4E-05 37.8 14.1 77 101-184 197-295 (331)
127 TIGR03713 acc_sec_asp1 accesso 94.0 0.81 1.8E-05 42.9 11.4 92 94-202 409-507 (519)
128 PF06722 DUF1205: Protein of u 93.8 0.062 1.4E-06 38.8 3.0 55 20-74 27-86 (97)
129 PLN02846 digalactosyldiacylgly 92.7 3 6.5E-05 38.6 12.7 73 97-184 287-364 (462)
130 cd01635 Glycosyltransferase_GT 92.6 0.7 1.5E-05 36.6 7.8 48 93-142 160-215 (229)
131 TIGR02201 heptsyl_trn_III lipo 92.6 0.86 1.9E-05 40.0 8.9 107 24-138 171-285 (344)
132 PRK14099 glycogen synthase; Pr 92.5 2.9 6.3E-05 38.8 12.6 93 94-194 350-458 (485)
133 cd03789 GT1_LPS_heptosyltransf 92.2 0.94 2E-05 38.4 8.4 96 33-138 121-223 (279)
134 TIGR02400 trehalose_OtsA alpha 92.2 1.9 4.2E-05 39.7 10.9 104 99-223 341-455 (456)
135 TIGR02195 heptsyl_trn_II lipop 91.6 1.7 3.6E-05 38.0 9.5 97 31-138 172-276 (334)
136 PRK10125 putative glycosyl tra 91.4 6.9 0.00015 35.4 13.5 101 49-177 256-365 (405)
137 PRK10422 lipopolysaccharide co 90.9 2.6 5.6E-05 37.2 10.0 99 32-138 182-287 (352)
138 PRK10916 ADP-heptose:LPS hepto 90.7 1.8 3.9E-05 38.1 8.9 97 32-138 179-286 (348)
139 PLN02501 digalactosyldiacylgly 90.6 7.1 0.00015 38.2 13.0 77 95-185 602-683 (794)
140 PF01075 Glyco_transf_9: Glyco 90.1 1.4 3E-05 36.5 7.2 99 32-138 104-208 (247)
141 PRK10964 ADP-heptose:LPS hepto 89.9 1.2 2.6E-05 38.7 7.0 132 33-182 178-321 (322)
142 TIGR02470 sucr_synth sucrose s 89.9 0.91 2E-05 44.6 6.7 94 93-196 618-726 (784)
143 PRK02797 4-alpha-L-fucosyltran 89.2 15 0.00032 32.3 12.9 134 34-180 145-291 (322)
144 PF06258 Mito_fiss_Elm1: Mitoc 89.0 10 0.00023 33.1 12.1 40 102-142 220-259 (311)
145 COG0381 WecB UDP-N-acetylgluco 88.2 5.5 0.00012 35.8 9.8 87 93-196 261-350 (383)
146 COG4370 Uncharacterized protei 88.2 1.2 2.6E-05 38.8 5.5 93 92-193 292-389 (412)
147 PF00731 AIRC: AIR carboxylase 87.8 5.8 0.00013 30.9 8.7 138 34-203 1-148 (150)
148 cd03788 GT1_TPS Trehalose-6-Ph 87.7 14 0.00029 34.1 12.6 71 98-184 345-428 (460)
149 TIGR02919 accessory Sec system 87.5 12 0.00026 34.5 11.9 81 93-184 327-412 (438)
150 PF07429 Glyco_transf_56: 4-al 87.1 19 0.00042 32.0 12.4 136 33-182 183-332 (360)
151 COG0438 RfaG Glycosyltransfera 84.5 21 0.00046 29.3 13.3 80 93-184 256-343 (381)
152 COG0859 RfaF ADP-heptose:LPS h 81.5 7.2 0.00016 34.2 7.6 95 33-138 175-276 (334)
153 PLN03063 alpha,alpha-trehalose 81.5 24 0.00052 35.1 11.8 101 106-225 371-478 (797)
154 PF05693 Glycogen_syn: Glycoge 80.4 2.2 4.8E-05 40.6 4.1 94 103-201 462-566 (633)
155 COG3660 Predicted nucleoside-d 79.6 38 0.00082 29.2 10.7 97 35-138 164-271 (329)
156 TIGR00725 conserved hypothetic 77.5 11 0.00024 29.5 6.7 39 102-140 82-123 (159)
157 PRK14501 putative bifunctional 76.9 55 0.0012 32.1 12.7 112 97-225 345-463 (726)
158 PRK12446 undecaprenyldiphospho 76.3 3.5 7.6E-05 36.5 4.0 99 34-138 3-120 (352)
159 PF05159 Capsule_synth: Capsul 74.5 34 0.00073 28.8 9.5 40 97-139 186-225 (269)
160 KOG0853 Glycosyltransferase [C 73.7 51 0.0011 30.8 10.8 64 124-195 381-445 (495)
161 TIGR01470 cysG_Nterm siroheme 73.2 29 0.00064 28.3 8.4 154 26-204 4-165 (205)
162 TIGR02398 gluc_glyc_Psyn gluco 72.1 87 0.0019 29.3 13.1 109 96-225 364-483 (487)
163 cd01840 SGNH_hydrolase_yrhL_li 71.6 37 0.0008 25.8 8.3 39 32-71 50-88 (150)
164 cd03793 GT1_Glycogen_synthase_ 71.2 15 0.00032 35.1 6.9 78 105-183 469-552 (590)
165 TIGR00730 conserved hypothetic 70.2 49 0.0011 26.4 8.9 33 106-138 91-132 (178)
166 TIGR00075 hypD hydrogenase exp 68.2 45 0.00098 29.9 8.9 40 20-60 124-163 (369)
167 PRK06718 precorrin-2 dehydroge 65.5 31 0.00066 28.1 7.0 151 26-204 5-165 (202)
168 PLN02470 acetolactate synthase 64.9 26 0.00056 33.3 7.4 91 39-139 2-109 (585)
169 PRK05579 bifunctional phosphop 60.9 1.3E+02 0.0028 27.3 11.1 141 32-182 6-182 (399)
170 PRK04885 ppnK inorganic polyph 60.8 19 0.00041 30.8 5.1 53 110-183 35-93 (265)
171 COG4394 Uncharacterized protei 60.1 1.2E+02 0.0026 26.6 12.7 91 45-138 185-282 (370)
172 TIGR03609 S_layer_CsaB polysac 59.7 80 0.0017 26.9 8.9 100 33-140 172-277 (298)
173 COG0409 HypD Hydrogenase matur 58.0 1E+02 0.0022 27.4 8.9 27 20-46 120-146 (364)
174 cd07039 TPP_PYR_POX Pyrimidine 57.2 91 0.002 24.3 10.2 27 113-139 64-96 (164)
175 KOG2941 Beta-1,4-mannosyltrans 55.9 1.6E+02 0.0034 26.6 13.1 146 31-198 252-424 (444)
176 PRK14077 pnk inorganic polypho 55.6 30 0.00065 29.9 5.5 53 110-183 64-120 (287)
177 PRK02155 ppnK NAD(+)/NADH kina 55.6 28 0.00061 30.1 5.3 53 110-183 63-119 (291)
178 PF06506 PrpR_N: Propionate ca 55.1 9.4 0.0002 30.2 2.2 32 110-142 32-63 (176)
179 PRK07313 phosphopantothenoylcy 54.2 1.1E+02 0.0024 24.4 10.9 139 34-182 3-179 (182)
180 PF04464 Glyphos_transf: CDP-G 53.6 30 0.00066 30.4 5.4 101 93-203 251-353 (369)
181 PRK15062 hydrogenase isoenzyme 53.4 66 0.0014 28.8 7.3 50 20-70 118-167 (364)
182 PRK01911 ppnK inorganic polyph 53.1 36 0.00077 29.5 5.6 53 110-183 64-120 (292)
183 TIGR00732 dprA DNA protecting 52.9 1.2E+02 0.0027 25.0 8.5 52 107-158 151-210 (220)
184 PRK02649 ppnK inorganic polyph 52.5 34 0.00075 29.8 5.4 53 110-183 68-124 (305)
185 TIGR00661 MJ1255 conserved hyp 52.4 90 0.0019 26.9 8.1 26 113-138 94-119 (321)
186 cd07025 Peptidase_S66 LD-Carbo 52.0 35 0.00076 29.3 5.3 75 47-143 47-123 (282)
187 cd07037 TPP_PYR_MenD Pyrimidin 50.8 82 0.0018 24.6 6.9 26 114-139 62-93 (162)
188 COG0801 FolK 7,8-dihydro-6-hyd 50.2 39 0.00084 26.7 4.8 29 35-63 3-31 (160)
189 PRK14092 2-amino-4-hydroxy-6-h 49.5 42 0.00092 26.5 5.0 34 28-61 2-35 (163)
190 PRK04539 ppnK inorganic polyph 46.9 46 0.00099 28.9 5.3 53 110-183 68-124 (296)
191 PRK03378 ppnK inorganic polyph 46.2 49 0.0011 28.7 5.3 53 110-183 63-119 (292)
192 PF06792 UPF0261: Uncharacteri 45.7 2E+02 0.0043 26.3 9.2 96 31-141 183-279 (403)
193 PLN02948 phosphoribosylaminoim 45.0 2.9E+02 0.0062 26.5 11.5 27 115-141 468-497 (577)
194 PRK02231 ppnK inorganic polyph 44.7 43 0.00094 28.7 4.7 57 106-183 38-98 (272)
195 PRK13982 bifunctional SbtC-lik 44.4 2.7E+02 0.0059 26.0 12.2 141 32-182 70-247 (475)
196 PRK03372 ppnK inorganic polyph 43.9 51 0.0011 28.8 5.1 53 110-183 72-128 (306)
197 PF03641 Lysine_decarbox: Poss 43.5 33 0.00071 25.8 3.5 34 106-139 48-91 (133)
198 PLN02935 Bifunctional NADH kin 43.4 54 0.0012 30.8 5.4 53 110-183 262-318 (508)
199 PF05014 Nuc_deoxyrib_tr: Nucl 43.3 40 0.00086 24.4 3.8 36 105-140 56-97 (113)
200 PRK01185 ppnK inorganic polyph 42.3 60 0.0013 27.8 5.2 53 110-183 52-105 (271)
201 cd03784 GT1_Gtf_like This fami 42.3 1.7E+02 0.0037 25.7 8.5 37 34-72 2-38 (401)
202 PF06180 CbiK: Cobalt chelatas 42.0 38 0.00082 28.9 4.0 39 34-72 2-43 (262)
203 PRK14075 pnk inorganic polypho 41.4 65 0.0014 27.3 5.3 53 110-183 41-94 (256)
204 cd07035 TPP_PYR_POX_like Pyrim 40.7 1.5E+02 0.0033 22.3 7.0 26 115-140 62-93 (155)
205 PRK03501 ppnK inorganic polyph 40.6 60 0.0013 27.7 5.0 53 111-183 40-97 (264)
206 cd07038 TPP_PYR_PDC_IPDC_like 40.5 1.6E+02 0.0034 22.9 7.0 27 113-139 60-92 (162)
207 PRK08155 acetolactate synthase 40.5 1.3E+02 0.0028 28.4 7.7 80 49-139 14-109 (564)
208 PF02826 2-Hacid_dh_C: D-isome 40.3 67 0.0014 25.3 5.0 105 32-178 36-142 (178)
209 cd07062 Peptidase_S66_mccF_lik 40.3 62 0.0013 28.1 5.2 74 47-142 51-126 (308)
210 PRK13840 sucrose phosphorylase 40.1 2.7E+02 0.0058 26.2 9.5 133 19-178 268-415 (495)
211 PRK01231 ppnK inorganic polyph 38.2 85 0.0019 27.2 5.6 53 110-183 62-118 (295)
212 TIGR00521 coaBC_dfp phosphopan 37.9 3.1E+02 0.0067 24.8 11.2 140 32-182 3-178 (390)
213 PRK02399 hypothetical protein; 37.7 3E+02 0.0065 25.2 9.1 94 30-140 183-279 (406)
214 COG1737 RpiR Transcriptional r 36.8 1.6E+02 0.0034 25.2 7.0 35 106-140 173-212 (281)
215 PF02776 TPP_enzyme_N: Thiamin 36.4 94 0.002 24.2 5.2 27 114-140 66-98 (172)
216 PF01924 HypD: Hydrogenase for 36.3 63 0.0014 28.8 4.5 48 168-223 215-262 (355)
217 PRK14076 pnk inorganic polypho 35.9 75 0.0016 30.3 5.3 51 114-183 350-404 (569)
218 COG3340 PepE Peptidase E [Amin 35.8 2.6E+02 0.0056 23.3 9.7 103 23-140 24-126 (224)
219 cd03412 CbiK_N Anaerobic cobal 35.7 74 0.0016 23.7 4.3 37 34-70 2-40 (127)
220 COG2607 Predicted ATPase (AAA+ 35.6 2.9E+02 0.0062 23.7 12.4 67 154-230 216-285 (287)
221 PRK03708 ppnK inorganic polyph 34.6 74 0.0016 27.3 4.6 50 115-183 60-112 (277)
222 PF04007 DUF354: Protein of un 34.5 1.8E+02 0.004 25.7 7.2 27 110-138 83-109 (335)
223 PRK08322 acetolactate synthase 34.0 1.2E+02 0.0027 28.3 6.5 27 113-139 64-96 (547)
224 cd01832 SGNH_hydrolase_like_1 33.8 1.6E+02 0.0035 22.5 6.3 35 35-69 70-112 (185)
225 PF10083 DUF2321: Uncharacteri 33.0 1.6E+02 0.0036 23.1 5.8 74 138-225 78-152 (158)
226 PRK06932 glycerate dehydrogena 32.3 1.5E+02 0.0032 25.8 6.3 62 32-123 147-208 (314)
227 PF08030 NAD_binding_6: Ferric 32.1 31 0.00068 26.1 1.8 41 34-74 3-48 (156)
228 PLN02929 NADH kinase 31.2 1.2E+02 0.0025 26.6 5.3 65 110-183 64-137 (301)
229 PRK07525 sulfoacetaldehyde ace 30.5 2.1E+02 0.0045 27.2 7.4 27 113-139 69-101 (588)
230 KOG1250 Threonine/serine dehyd 30.4 3E+02 0.0065 25.3 7.7 62 116-184 248-317 (457)
231 cd03416 CbiX_SirB_N Sirohydroc 30.4 1.9E+02 0.0041 20.1 6.1 34 35-68 2-37 (101)
232 PRK06276 acetolactate synthase 29.9 1.6E+02 0.0034 28.1 6.4 27 113-139 64-96 (586)
233 TIGR00147 lipid kinase, YegS/R 29.7 2.8E+02 0.0061 23.5 7.5 26 115-140 60-91 (293)
234 PF12689 Acid_PPase: Acid Phos 28.9 1.7E+02 0.0037 23.1 5.5 125 35-179 35-165 (169)
235 PRK05282 (alpha)-aspartyl dipe 28.8 3.5E+02 0.0075 22.6 8.4 45 22-68 23-67 (233)
236 PRK08410 2-hydroxyacid dehydro 28.6 1.8E+02 0.0038 25.3 6.1 60 32-120 145-204 (311)
237 cd01020 TroA_b Metal binding p 28.3 1.6E+02 0.0034 24.9 5.6 34 169-202 103-138 (264)
238 PRK06457 pyruvate dehydrogenas 28.0 2.2E+02 0.0048 26.7 7.1 27 113-139 65-97 (549)
239 cd01018 ZntC Metal binding pro 27.8 1.4E+02 0.003 25.1 5.2 32 171-202 122-155 (266)
240 TIGR03457 sulphoacet_xsc sulfo 27.8 2.4E+02 0.0051 26.7 7.3 27 113-139 65-97 (579)
241 PRK09545 znuA high-affinity zi 27.7 1.4E+02 0.0031 25.9 5.3 31 172-202 156-188 (311)
242 PRK00923 sirohydrochlorin coba 27.4 2.5E+02 0.0054 20.5 7.9 36 33-68 2-39 (126)
243 PF02016 Peptidase_S66: LD-car 27.3 71 0.0015 27.4 3.3 73 47-141 47-121 (284)
244 COG1422 Predicted membrane pro 27.0 1.5E+02 0.0034 24.2 4.9 71 124-207 24-94 (201)
245 COG2159 Predicted metal-depend 27.0 3.5E+02 0.0076 23.3 7.6 22 107-128 187-210 (293)
246 COG0297 GlgA Glycogen synthase 26.5 5.4E+02 0.012 24.1 15.3 142 22-182 281-441 (487)
247 PRK08527 acetolactate synthase 26.4 2.4E+02 0.0053 26.6 7.1 27 113-139 67-99 (563)
248 PF01371 Trp_repressor: Trp re 26.4 1.9E+02 0.0041 20.3 4.7 42 169-216 15-56 (87)
249 PRK06487 glycerate dehydrogena 26.4 2.2E+02 0.0047 24.8 6.3 61 32-123 148-208 (317)
250 PRK06882 acetolactate synthase 26.1 2.1E+02 0.0046 27.0 6.6 27 113-139 68-100 (574)
251 cd01828 sialate_O-acetylestera 26.1 2.6E+02 0.0056 21.1 6.1 47 22-70 40-95 (169)
252 cd01019 ZnuA Zinc binding prot 26.1 1.6E+02 0.0035 25.2 5.3 31 172-202 132-164 (286)
253 COG3195 Uncharacterized protei 26.0 2.6E+02 0.0057 22.2 5.9 94 103-201 64-163 (176)
254 cd01145 TroA_c Periplasmic bin 25.9 1.6E+02 0.0035 23.6 5.1 31 172-202 119-151 (203)
255 PRK07449 2-succinyl-5-enolpyru 25.8 3E+02 0.0064 25.9 7.5 80 50-139 11-105 (568)
256 PRK15469 ghrA bifunctional gly 25.6 4.5E+02 0.0097 22.9 8.9 66 32-124 136-202 (312)
257 PRK10637 cysG siroheme synthas 25.6 4.7E+02 0.01 24.1 8.6 36 26-69 7-42 (457)
258 COG2099 CobK Precorrin-6x redu 25.5 4.3E+02 0.0092 22.6 8.3 54 124-177 162-219 (257)
259 PRK12361 hypothetical protein; 25.5 5.1E+02 0.011 24.4 9.0 28 114-141 299-330 (547)
260 PF03033 Glyco_transf_28: Glyc 25.4 1.6E+02 0.0034 21.5 4.6 35 35-71 1-35 (139)
261 PRK11914 diacylglycerol kinase 25.0 3.8E+02 0.0083 22.9 7.5 26 115-140 67-96 (306)
262 PRK15438 erythronate-4-phospha 24.9 2.6E+02 0.0056 25.2 6.6 19 101-121 158-176 (378)
263 TIGR01162 purE phosphoribosyla 24.9 3.4E+02 0.0074 21.3 10.2 29 38-68 3-31 (156)
264 PRK08978 acetolactate synthase 24.8 2.5E+02 0.0054 26.3 6.8 26 114-139 65-96 (548)
265 PRK08051 fre FMN reductase; Va 24.8 97 0.0021 25.3 3.6 39 32-70 102-140 (232)
266 PRK06725 acetolactate synthase 24.6 2.5E+02 0.0054 26.7 6.7 27 113-139 78-110 (570)
267 PRK09259 putative oxalyl-CoA d 24.5 2.2E+02 0.0047 26.9 6.4 27 113-139 73-105 (569)
268 PRK06456 acetolactate synthase 24.4 2.5E+02 0.0054 26.5 6.7 26 114-139 70-101 (572)
269 COG0041 PurE Phosphoribosylcar 24.3 3.6E+02 0.0077 21.3 11.0 136 35-206 4-153 (162)
270 PRK07979 acetolactate synthase 24.2 2.8E+02 0.006 26.3 7.0 27 113-139 68-100 (574)
271 PRK08199 thiamine pyrophosphat 24.0 2.2E+02 0.0048 26.8 6.3 27 113-139 72-104 (557)
272 PRK15409 bifunctional glyoxyla 23.9 2E+02 0.0043 25.2 5.5 67 32-124 145-212 (323)
273 COG1817 Uncharacterized protei 23.8 4.4E+02 0.0095 23.4 7.4 103 19-138 168-277 (346)
274 PRK07710 acetolactate synthase 23.7 2.9E+02 0.0062 26.1 7.0 27 113-139 79-111 (571)
275 TIGR01319 glmL_fam conserved h 23.6 4E+02 0.0086 24.9 7.5 48 19-69 109-158 (463)
276 PF05225 HTH_psq: helix-turn-h 23.4 1.7E+02 0.0037 17.5 3.6 25 169-196 1-25 (45)
277 TIGR03837 efp_adjacent_2 conse 23.4 2.7E+02 0.0058 25.1 6.2 100 44-149 188-295 (371)
278 PRK06546 pyruvate dehydrogenas 23.4 3.6E+02 0.0077 25.6 7.6 26 114-139 68-99 (578)
279 PRK06048 acetolactate synthase 23.4 3E+02 0.0065 26.0 7.0 27 113-139 71-103 (561)
280 TIGR02418 acolac_catab acetola 23.1 2.6E+02 0.0056 26.2 6.5 26 114-139 63-94 (539)
281 COG2327 WcaK Polysaccharide py 23.0 5.4E+02 0.012 23.4 8.1 79 94-183 266-350 (385)
282 PF02571 CbiJ: Precorrin-6x re 22.5 4.7E+02 0.01 22.0 8.7 105 14-138 112-225 (249)
283 TIGR02482 PFKA_ATP 6-phosphofr 22.5 96 0.0021 27.0 3.2 37 107-143 86-126 (301)
284 PF04895 DUF651: Archaeal prot 22.3 1.7E+02 0.0036 21.6 4.0 57 171-231 53-110 (110)
285 TIGR03127 RuMP_HxlB 6-phospho 22.3 3.4E+02 0.0073 21.0 6.2 31 109-139 71-106 (179)
286 PF02514 CobN-Mg_chel: CobN/Ma 22.3 5.5E+02 0.012 26.8 8.9 52 19-70 53-110 (1098)
287 cd04299 GT1_Glycogen_Phosphory 22.1 8E+02 0.017 24.6 10.1 34 106-140 562-600 (778)
288 PF01488 Shikimate_DH: Shikima 22.0 2.3E+02 0.0049 21.1 4.9 63 51-123 24-86 (135)
289 PRK09107 acetolactate synthase 22.0 4.1E+02 0.0088 25.4 7.7 27 113-139 75-107 (595)
290 PRK13059 putative lipid kinase 21.9 4E+02 0.0086 22.7 7.0 26 115-140 59-90 (295)
291 COG1052 LdhA Lactate dehydroge 21.8 2.6E+02 0.0057 24.6 5.9 65 33-123 147-211 (324)
292 PRK08979 acetolactate synthase 21.7 3.7E+02 0.0081 25.4 7.3 27 113-139 68-100 (572)
293 cd01017 AdcA Metal binding pro 21.7 2.1E+02 0.0045 24.3 5.2 31 172-202 124-156 (282)
294 cd01147 HemV-2 Metal binding p 21.4 3.7E+02 0.0081 21.9 6.6 30 110-141 74-107 (262)
295 TIGR00118 acolac_lg acetolacta 21.3 3.4E+02 0.0073 25.5 6.9 27 113-139 65-97 (558)
296 COG1179 Dinucleotide-utilizing 21.3 1.6E+02 0.0036 25.0 4.2 53 105-183 25-80 (263)
297 TIGR02113 coaC_strep phosphopa 21.2 4.2E+02 0.0092 21.0 10.6 44 115-158 80-146 (177)
298 KOG0574 STE20-like serine/thre 21.0 1.9E+02 0.0041 25.7 4.7 61 106-202 96-156 (502)
299 PF07905 PucR: Purine cataboli 21.0 3.4E+02 0.0074 19.8 6.5 48 19-70 32-81 (123)
300 PRK04761 ppnK inorganic polyph 20.9 95 0.0021 26.3 2.8 28 111-140 26-57 (246)
301 PRK08266 hypothetical protein; 20.9 3.8E+02 0.0082 25.1 7.1 26 114-139 70-101 (542)
302 PRK07418 acetolactate synthase 20.8 4E+02 0.0087 25.5 7.4 28 112-139 85-118 (616)
303 PRK14116 gpmA phosphoglyceromu 20.8 58 0.0012 26.9 1.5 22 114-135 177-198 (228)
304 COG0111 SerA Phosphoglycerate 20.8 3.2E+02 0.0069 24.0 6.2 103 32-179 142-249 (324)
305 smart00046 DAGKc Diacylglycero 20.7 95 0.0021 22.8 2.5 28 115-142 52-88 (124)
306 TIGR00173 menD 2-succinyl-5-en 20.6 3.9E+02 0.0083 24.3 7.0 26 113-138 64-95 (432)
307 PF15186 TEX13: Testis-express 20.4 2.4E+02 0.0053 21.9 4.6 45 145-193 17-63 (152)
308 PF11071 DUF2872: Protein of u 20.3 1E+02 0.0022 23.5 2.5 32 105-138 67-106 (141)
309 PRK05858 hypothetical protein; 20.3 3E+02 0.0064 25.8 6.3 25 115-139 70-100 (542)
310 PF03693 RHH_2: Uncharacterise 20.3 2.3E+02 0.0051 19.4 4.2 48 170-224 30-77 (80)
No 1
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=3.5e-41 Score=305.76 Aligned_cols=203 Identities=37% Similarity=0.637 Sum_probs=178.7
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCC--------CccchhhhhhhhHHHH
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGER--------SQGLEKWIQEEGLEER 90 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~--------~~~~~~~~lp~~~~~~ 90 (232)
+++++.+||+.+++++||||||||...++.+++.+++.+|..++++|||+++.+.. .++...+ +|+++.++
T Consensus 253 ~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~~~~~~~~-lp~~f~er 331 (470)
T PLN03015 253 KRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSAS-LPEGFLDR 331 (470)
T ss_pred chHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCccccccccccccchhhc-CChHHHHh
Confidence 34579999999988999999999999999999999999999999999999974311 0112223 89999999
Q ss_pred hcCCCeEEecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh--hhhhcccccCCCccc
Q 046553 91 AKGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ--AAVTWGLEDKSGLVI 168 (232)
Q Consensus 91 ~~~~nv~v~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~--G~g~~~~~~~~~~~~ 168 (232)
++..++++.+|+||..+|+|+++++|||||||||+.|++++|||||++|+++||+.||+++++ |+|+.+....+...+
T Consensus 332 ~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v 411 (470)
T PLN03015 332 TRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVI 411 (470)
T ss_pred hccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCcc
Confidence 988999999999999999999999999999999999999999999999999999999999965 999887521112358
Q ss_pred CHHHHHHHHHHHHcC-ChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHH
Q 046553 169 KREKVKEAIEKLMDR-GKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFV 222 (232)
Q Consensus 169 ~~~~l~~~i~~vl~d-~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l 222 (232)
+.+++.++|+++|.+ +++++++|+||++|++++++++++||||++++++|+..+
T Consensus 412 ~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~~~~ 466 (470)
T PLN03015 412 GREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAKRC 466 (470)
T ss_pred CHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhc
Confidence 999999999999963 367899999999999999999999999999999999875
No 2
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=4.5e-41 Score=307.54 Aligned_cols=206 Identities=35% Similarity=0.647 Sum_probs=181.1
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCC-------ccchhhhhhhhHHHHh
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERS-------QGLEKWIQEEGLEERA 91 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~-------~~~~~~~lp~~~~~~~ 91 (232)
+++++.+||+.++++++|||||||...++.+++.+++.+|...+++|||+++.+... .+...+ +|+++.++.
T Consensus 258 ~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~~~~~~~~~-lp~~~~~~~ 336 (480)
T PLN00164 258 PPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDADLDEL-LPEGFLERT 336 (480)
T ss_pred chHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCcccccccccccchhhh-CChHHHHHh
Confidence 467899999999889999999999998999999999999999999999999854210 011223 889999999
Q ss_pred cCCCeEEecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh--hhhhcccccCC-Cccc
Q 046553 92 KGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ--AAVTWGLEDKS-GLVI 168 (232)
Q Consensus 92 ~~~nv~v~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~--G~g~~~~~~~~-~~~~ 168 (232)
..+++++.+|+||..||+|+++++|||||||||+.|++++|||||++|+++||+.||+++.+ |+|+.+..++. ++.+
T Consensus 337 ~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~ 416 (480)
T PLN00164 337 KGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFV 416 (480)
T ss_pred cCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcC
Confidence 89999998999999999999999999999999999999999999999999999999998755 99987743210 1247
Q ss_pred CHHHHHHHHHHHHcCCh-hhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHhh
Q 046553 169 KREKVKEAIEKLMDRGK-QGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQR 225 (232)
Q Consensus 169 ~~~~l~~~i~~vl~d~~-~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~~ 225 (232)
++++|.++|+++|.+++ +++.+|++|++|++++++++++||||+++|++|++++...
T Consensus 417 ~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v~~~~~~ 474 (480)
T PLN00164 417 EAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQRLAREIRHG 474 (480)
T ss_pred cHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 99999999999998776 5899999999999999999999999999999999998765
No 3
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=7.2e-41 Score=304.94 Aligned_cols=202 Identities=37% Similarity=0.642 Sum_probs=179.3
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCC---------------ccchhhhh
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERS---------------QGLEKWIQ 83 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~---------------~~~~~~~l 83 (232)
+++++.+||+.+++++||||||||...++.+++.+++.+|..++++|||+++.+... +....+ +
T Consensus 249 ~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-l 327 (481)
T PLN02992 249 TDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEY-L 327 (481)
T ss_pred chHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCcccccccchhhh-C
Confidence 456799999999889999999999999999999999999999999999999742110 011123 8
Q ss_pred hhhHHHHhcCCCeEEecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHH-h-hhhhcccc
Q 046553 84 EEGLEERAKGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAV-Q-AAVTWGLE 161 (232)
Q Consensus 84 p~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~-~-G~g~~~~~ 161 (232)
|++|.++++..|+++.+|+||..+|+|+++++|||||||||+.|++++|||||++|+++||+.||++++ . |+|+.++.
T Consensus 328 p~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~ 407 (481)
T PLN02992 328 PEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDD 407 (481)
T ss_pred CHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecC
Confidence 999999999999999999999999999999999999999999999999999999999999999999996 6 99998864
Q ss_pred cCCCcccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHhhhc--CCCchHHHHHHHHHHHHh
Q 046553 162 DKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGEIANRATG--VGASSHRNMEMLIEFVIQ 224 (232)
Q Consensus 162 ~~~~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~--~gg~~~~~l~~~i~~l~~ 224 (232)
. ++.++.++|.++|+++|.++ +++++++++++++++++++++ +||||++++++|++.+.+
T Consensus 408 ~--~~~~~~~~l~~av~~vm~~~-~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~ 469 (481)
T PLN02992 408 P--KEVISRSKIEALVRKVMVEE-EGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQR 469 (481)
T ss_pred C--CCcccHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHH
Confidence 2 12489999999999999864 788999999999999999994 599999999999998764
No 4
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=5.8e-41 Score=303.71 Aligned_cols=196 Identities=30% Similarity=0.563 Sum_probs=174.4
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEE
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFII 98 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v 98 (232)
+++.+..||+.++++++|||||||...++.+++.+++.+| .+.+|+|+++.+... . +|+++.++..+.|+++
T Consensus 250 ~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~~~~-----~-lp~~~~~~~~~~~~~i 321 (449)
T PLN02173 250 EAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRASEES-----K-LPPGFLETVDKDKSLV 321 (449)
T ss_pred cchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEeccchh-----c-ccchHHHhhcCCceEE
Confidence 4567999999999999999999999999999999999999 678899999853211 1 7888888887788999
Q ss_pred ecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh--hhhhcccccCCCcccCHHHHHHH
Q 046553 99 RGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ--AAVTWGLEDKSGLVIKREKVKEA 176 (232)
Q Consensus 99 ~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~--G~g~~~~~~~~~~~~~~~~l~~~ 176 (232)
.+|+||..||+|+++++|||||||||++|++++|||||++|+++||+.||+++++ |+|+.+..++.+..++.++|.++
T Consensus 322 ~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~a 401 (449)
T PLN02173 322 LKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFS 401 (449)
T ss_pred eCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCcccHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999997 88887754321234699999999
Q ss_pred HHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHH
Q 046553 177 IEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVI 223 (232)
Q Consensus 177 i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~ 223 (232)
|+++|.+ ++++++|+||+++++++++++++||||++++++|++++.
T Consensus 402 v~~vm~~-~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 402 IKEVMEG-EKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred HHHHhcC-ChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 9999986 557899999999999999999999999999999999873
No 5
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=1e-40 Score=304.85 Aligned_cols=211 Identities=56% Similarity=1.042 Sum_probs=181.9
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEE
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFII 98 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v 98 (232)
+++++.+||+.+++++||||||||......+++.+++.+|..++.+|||+++.+....+..++.+|++|.++..+.|+++
T Consensus 269 ~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v 348 (491)
T PLN02534 269 DETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLI 348 (491)
T ss_pred chHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhcCchhhHHhhccCCeec
Confidence 34679999999998999999999999999999999999999999999999985321111112226889988877889999
Q ss_pred ecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh--hhhhcccc-------cCC--Ccc
Q 046553 99 RGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ--AAVTWGLE-------DKS--GLV 167 (232)
Q Consensus 99 ~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~--G~g~~~~~-------~~~--~~~ 167 (232)
.+|+||..+|+|+++++|||||||||++||+++|||+|++|++.||+.||+++++ |+|+.+.. +++ +..
T Consensus 349 ~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~ 428 (491)
T PLN02534 349 KGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVL 428 (491)
T ss_pred cCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCc
Confidence 8999999999999999999999999999999999999999999999999999987 88875531 110 114
Q ss_pred cCHHHHHHHHHHHHcC-ChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHhhhccC
Q 046553 168 IKREKVKEAIEKLMDR-GKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQRTRGQ 229 (232)
Q Consensus 168 ~~~~~l~~~i~~vl~d-~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~~~~~~ 229 (232)
+++++|.++|+++|.+ +++++++|+||++|++++++++.+||||+++|++||+++.....+|
T Consensus 429 v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~~~~~~ 491 (491)
T PLN02534 429 VKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVLKQQSLQ 491 (491)
T ss_pred cCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhccC
Confidence 7999999999999974 5678999999999999999999999999999999999998765544
No 6
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.4e-40 Score=301.83 Aligned_cols=197 Identities=34% Similarity=0.578 Sum_probs=174.1
Q ss_pred hhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCC-ccchhhhhhhhHHHHhcCCCeEE
Q 046553 20 DEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERS-QGLEKWIQEEGLEERAKGRGFII 98 (232)
Q Consensus 20 ~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~-~~~~~~~lp~~~~~~~~~~nv~v 98 (232)
++++.+||+.+++++||||||||...++.+++.+++.+|+..+.+|||+++.+... ++.... +|++|.+++.. |..+
T Consensus 251 ~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~-lp~~f~er~~~-~g~v 328 (451)
T PLN02410 251 NKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIES-LPKEFSKIISG-RGYI 328 (451)
T ss_pred chHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhc-CChhHHHhccC-CeEE
Confidence 45789999999889999999999999999999999999999999999999843210 011011 78999988854 4566
Q ss_pred ecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh--hhhhcccccCCCcccCHHHHHHH
Q 046553 99 RGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ--AAVTWGLEDKSGLVIKREKVKEA 176 (232)
Q Consensus 99 ~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~--G~g~~~~~~~~~~~~~~~~l~~~ 176 (232)
.+|+||..+|+|+++++|||||||||+.|++++|||||++|+++||+.||+++++ |+|+.+.. . +++++|.++
T Consensus 329 ~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~-~----~~~~~v~~a 403 (451)
T PLN02410 329 VKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG-D----LDRGAVERA 403 (451)
T ss_pred EccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC-c----ccHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999987 89987763 2 899999999
Q ss_pred HHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHh
Q 046553 177 IEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQ 224 (232)
Q Consensus 177 i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~ 224 (232)
|+++|.+++ +++||+++++|++++++++++||||+.++++||+.+..
T Consensus 404 v~~lm~~~~-~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 404 VKRLMVEEE-GEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred HHHHHcCCc-HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 999998754 88999999999999999999999999999999998753
No 7
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=1.4e-40 Score=302.36 Aligned_cols=200 Identities=36% Similarity=0.608 Sum_probs=172.9
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEE
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFII 98 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v 98 (232)
+++++.+||+.++++++|||||||...++.+++.+++.+|..++++|||+++..... ..++ +|+++.++... +..+
T Consensus 261 ~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~~~--~~~~-lp~~f~er~~~-~g~i 336 (468)
T PLN02207 261 RRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEVT--NDDL-LPEGFLDRVSG-RGMI 336 (468)
T ss_pred hhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCCcc--cccc-CCHHHHhhcCC-CeEE
Confidence 346799999999889999999999999999999999999999999999999853211 1123 88999887754 4567
Q ss_pred ecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh--hhhhccccc---CCCcccCHHHH
Q 046553 99 RGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ--AAVTWGLED---KSGLVIKREKV 173 (232)
Q Consensus 99 ~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~--G~g~~~~~~---~~~~~~~~~~l 173 (232)
.+|+||..+|+|+++++|||||||||+.||+++|||||++|+++||+.||+++++ |+|+.+..+ +.+..++.++|
T Consensus 337 ~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i 416 (468)
T PLN02207 337 CGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEI 416 (468)
T ss_pred EEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHH
Confidence 7999999999999999999999999999999999999999999999999998776 998855311 00124699999
Q ss_pred HHHHHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHh
Q 046553 174 KEAIEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQ 224 (232)
Q Consensus 174 ~~~i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~ 224 (232)
.++|+++|.+ ++++||+||++|++++++++.+||||++++++||+++..
T Consensus 417 ~~av~~vm~~--~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~ 465 (468)
T PLN02207 417 ETAIRCVMNK--DNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIG 465 (468)
T ss_pred HHHHHHHHhc--chHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence 9999999972 467999999999999999999999999999999999864
No 8
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.6e-40 Score=303.45 Aligned_cols=203 Identities=35% Similarity=0.635 Sum_probs=177.7
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEE
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFII 98 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v 98 (232)
.++++..||+.++++++|||||||...++.+++.+++.+|...+++|||+++.+......... +|+++.++..+.|+++
T Consensus 269 ~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~~~-lp~~~~~r~~~~g~~v 347 (477)
T PLN02863 269 SVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSN-IPSGFEDRVAGRGLVI 347 (477)
T ss_pred cHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccccchhh-CCHHHHHHhccCCEEe
Confidence 356899999999889999999999999999999999999999999999999854321111112 8899988888899999
Q ss_pred ecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh--hhhhcccccCCCcccCHHHHHHH
Q 046553 99 RGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ--AAVTWGLEDKSGLVIKREKVKEA 176 (232)
Q Consensus 99 ~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~--G~g~~~~~~~~~~~~~~~~l~~~ 176 (232)
.+|+||..+|+|+++++|||||||||++||+++|||+|++|+++||+.||+++++ |+|+.+...+ .+..+.+++.++
T Consensus 348 ~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~-~~~~~~~~v~~~ 426 (477)
T PLN02863 348 RGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGA-DTVPDSDELARV 426 (477)
T ss_pred cCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCC-CCCcCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999765 9998775422 224689999999
Q ss_pred HHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHhhh
Q 046553 177 IEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQRT 226 (232)
Q Consensus 177 i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~~~ 226 (232)
|+++|. ++++||+||+++++.+++++.+||||++++++||+.+...+
T Consensus 427 v~~~m~---~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~ 473 (477)
T PLN02863 427 FMESVS---ENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVELG 473 (477)
T ss_pred HHHHhh---ccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhc
Confidence 999994 23599999999999999999999999999999999997664
No 9
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=2.1e-40 Score=303.82 Aligned_cols=203 Identities=49% Similarity=0.847 Sum_probs=175.9
Q ss_pred hhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEe
Q 046553 20 DEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIR 99 (232)
Q Consensus 20 ~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~ 99 (232)
++++..||+.++++++|||||||+...+.+++.+++.+|..++++|||+++......+...+ +|+++.++..+.|+++.
T Consensus 272 ~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~-lp~~~~~r~~~~g~~v~ 350 (482)
T PLN03007 272 EQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEW-LPEGFEERTKGKGLIIR 350 (482)
T ss_pred hhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhc-CCHHHHHHhccCCEEEe
Confidence 57799999999889999999999998889999999999999999999999864321111112 88999999889999999
Q ss_pred cccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh--hhhhcccccC----CCcccCHHHH
Q 046553 100 GWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ--AAVTWGLEDK----SGLVIKREKV 173 (232)
Q Consensus 100 ~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~--G~g~~~~~~~----~~~~~~~~~l 173 (232)
+|+||..||+|+++++|||||||||+.||+++|||||++|+++||+.||+++++ ++|+.+...+ ....+++++|
T Consensus 351 ~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l 430 (482)
T PLN03007 351 GWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKV 430 (482)
T ss_pred cCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHH
Confidence 999999999999999999999999999999999999999999999999999875 4444321100 0124899999
Q ss_pred HHHHHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHh
Q 046553 174 KEAIEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQ 224 (232)
Q Consensus 174 ~~~i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~ 224 (232)
.++|+++|.| +++++||+||++|++.+++++.+||||+.++++||+.+..
T Consensus 431 ~~av~~~m~~-~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~ 480 (482)
T PLN03007 431 EKAVREVIVG-EEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEELNS 480 (482)
T ss_pred HHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 9999999986 5688999999999999999999999999999999999874
No 10
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=2.7e-40 Score=300.75 Aligned_cols=198 Identities=34% Similarity=0.559 Sum_probs=171.1
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEE
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFII 98 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v 98 (232)
.++++.+||+.++++++|||||||....+.+++.+++.+|...+.+|||+++.....+ .+..+.++..+.+..+
T Consensus 255 ~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~~~------~~~~~~~~~~~~~g~v 328 (456)
T PLN02210 255 SDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEKAQ------NVQVLQEMVKEGQGVV 328 (456)
T ss_pred cchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCcccc------chhhHHhhccCCCeEE
Confidence 4678999999998899999999999988899999999999999999999997542211 2344555543244466
Q ss_pred ecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh--hhhhcccccCCCcccCHHHHHHH
Q 046553 99 RGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ--AAVTWGLEDKSGLVIKREKVKEA 176 (232)
Q Consensus 99 ~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~--G~g~~~~~~~~~~~~~~~~l~~~ 176 (232)
.+|+||..+|+|+++++|||||||||++|++++|||+|++|+++||+.||+++++ |+|+.+...+.++.+++++|.++
T Consensus 329 ~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~a 408 (456)
T PLN02210 329 LEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERC 408 (456)
T ss_pred EecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999986 99988754211234899999999
Q ss_pred HHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHH
Q 046553 177 IEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVI 223 (232)
Q Consensus 177 i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~ 223 (232)
|+++|.+ ++++++|+||++|++.+++++++||||++++++||+++.
T Consensus 409 v~~~m~~-~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 409 IEAVTEG-PAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred HHHHhcC-chHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 9999985 557889999999999999999999999999999999874
No 11
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=3.6e-40 Score=298.19 Aligned_cols=205 Identities=29% Similarity=0.496 Sum_probs=180.0
Q ss_pred hhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEe
Q 046553 20 DEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIR 99 (232)
Q Consensus 20 ~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~ 99 (232)
++++.+|||.+++++||||||||...++.+++.++..+|+..+.+|+|+++.+...++...+ +|++|.++.++.++++.
T Consensus 244 ~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~-lp~~f~~r~~grG~v~~ 322 (453)
T PLN02764 244 EERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEA-LPEGFEERVKGRGVVWG 322 (453)
T ss_pred hhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhh-CCcchHhhhccCCcEEe
Confidence 56899999999999999999999999999999999999999999999999854222111223 99999999999999999
Q ss_pred cccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh--hhhhcccccCCCcccCHHHHHHHH
Q 046553 100 GWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ--AAVTWGLEDKSGLVIKREKVKEAI 177 (232)
Q Consensus 100 ~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~--G~g~~~~~~~~~~~~~~~~l~~~i 177 (232)
+|+||..||+|+++++|||||||||++|++++|||+|++|+++||+.||+++++ |+|+.+..++ ...++.++|.++|
T Consensus 323 ~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~-~~~~~~e~i~~av 401 (453)
T PLN02764 323 GWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREE-TGWFSKESLRDAI 401 (453)
T ss_pred CCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEecccc-CCccCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999975 8888764321 1247999999999
Q ss_pred HHHHcCC-hhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHhhhccCC
Q 046553 178 EKLMDRG-KQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQRTRGQQ 230 (232)
Q Consensus 178 ~~vl~d~-~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~~~~~~~ 230 (232)
+++|+++ ++++++|++++++++.++ +||||+.++++||+++......++
T Consensus 402 ~~vm~~~~~~g~~~r~~a~~~~~~~~----~~GSS~~~l~~lv~~~~~~~~~~~ 451 (453)
T PLN02764 402 NSVMKRDSEIGNLVKKNHTKWRETLA----SPGLLTGYVDNFIESLQDLVSGTS 451 (453)
T ss_pred HHHhcCCchhHHHHHHHHHHHHHHHH----hcCCHHHHHHHHHHHHHHhccccc
Confidence 9999875 678899999999999985 579999999999999988766554
No 12
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=5.8e-40 Score=299.35 Aligned_cols=203 Identities=30% Similarity=0.537 Sum_probs=175.3
Q ss_pred hhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccc-hhhhhhhhHHHHhcCCCeEE
Q 046553 20 DEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGL-EKWIQEEGLEERAKGRGFII 98 (232)
Q Consensus 20 ~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~-~~~~lp~~~~~~~~~~nv~v 98 (232)
++++.+||+.++++++|||||||+..++.+++.+++.++...+++|||+++........ ..+ +|+++.++. +.|..+
T Consensus 264 ~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~-lp~~~~~~~-~~~g~v 341 (480)
T PLN02555 264 ADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHV-LPEEFLEKA-GDKGKI 341 (480)
T ss_pred chhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhc-CChhhhhhc-CCceEE
Confidence 56899999999888999999999999999999999999999999999998743111000 112 788887766 356677
Q ss_pred ecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh--hhhhcccccC-CCcccCHHHHHH
Q 046553 99 RGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ--AAVTWGLEDK-SGLVIKREKVKE 175 (232)
Q Consensus 99 ~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~--G~g~~~~~~~-~~~~~~~~~l~~ 175 (232)
.+|+||..||.|+++++|||||||||+.||+++|||||++|+++||+.||+++++ |+|+.+.... +...++.++|.+
T Consensus 342 ~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~ 421 (480)
T PLN02555 342 VQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITREEVAE 421 (480)
T ss_pred EecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccCcCcHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999988 9999874210 022489999999
Q ss_pred HHHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHhh
Q 046553 176 AIEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQR 225 (232)
Q Consensus 176 ~i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~~ 225 (232)
+|+++|.+ ++++.+|+||++|++++++++++||||+.++++||+++...
T Consensus 422 ~v~~vm~~-~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~~ 470 (480)
T PLN02555 422 CLLEATVG-EKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVRK 470 (480)
T ss_pred HHHHHhcC-chHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 99999985 57889999999999999999999999999999999998754
No 13
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=3.4e-40 Score=298.86 Aligned_cols=188 Identities=37% Similarity=0.683 Sum_probs=167.4
Q ss_pred hhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCc----cchhhhhhhhHHHHhcCCC
Q 046553 20 DEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQ----GLEKWIQEEGLEERAKGRG 95 (232)
Q Consensus 20 ~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~----~~~~~~lp~~~~~~~~~~n 95 (232)
++++.+||+.+++++||||||||...++.+++.+++.+|..++++|||+++.+...+ +...+ +|++|.++++..|
T Consensus 257 ~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~-lp~gf~er~~~~g 335 (451)
T PLN03004 257 AVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSL-LPEGFLSRTEDKG 335 (451)
T ss_pred hhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccccchhhh-CChHHHHhccCCc
Confidence 467999999998899999999999999999999999999999999999998531100 11223 7899999999999
Q ss_pred eEEecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh--hhhhcccccCCCcccCHHHH
Q 046553 96 FIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ--AAVTWGLEDKSGLVIKREKV 173 (232)
Q Consensus 96 v~v~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~--G~g~~~~~~~~~~~~~~~~l 173 (232)
+++.+|+||..||+|+++++|||||||||+.|++++|||+|++|+++||+.||+++++ |+|+.+..++ .+.+++++|
T Consensus 336 ~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~-~~~~~~e~l 414 (451)
T PLN03004 336 MVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESE-TGFVSSTEV 414 (451)
T ss_pred EEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCc-CCccCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999975 9999886431 124799999
Q ss_pred HHHHHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHH
Q 046553 174 KEAIEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHR 213 (232)
Q Consensus 174 ~~~i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~ 213 (232)
.++|+++|.|+ +|+++++++++..+.++++||||++
T Consensus 415 ~~av~~vm~~~----~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 415 EKRVQEIIGEC----PVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred HHHHHHHhcCH----HHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999876 8999999999999999999999864
No 14
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=7.1e-40 Score=300.10 Aligned_cols=201 Identities=35% Similarity=0.570 Sum_probs=171.6
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCC---------CccchhhhhhhhHHH
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGER---------SQGLEKWIQEEGLEE 89 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~---------~~~~~~~~lp~~~~~ 89 (232)
.++++.+||+.++++++|||||||+..++.+++.+++.+|..++++|||+++.+.. ......+ +|+++.+
T Consensus 260 ~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~~~-lp~~~~~ 338 (481)
T PLN02554 260 KQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLEEI-LPEGFLD 338 (481)
T ss_pred cchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCcccccccccccccchhhh-CChHHHH
Confidence 34689999999988899999999998889999999999999999999999975311 0011122 6888888
Q ss_pred HhcCCCeEEecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHH-HHh-hhhhcccccC----
Q 046553 90 RAKGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKL-AVQ-AAVTWGLEDK---- 163 (232)
Q Consensus 90 ~~~~~nv~v~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~-v~~-G~g~~~~~~~---- 163 (232)
+.. .|.++.+|+||..||+|+++++|||||||||+.|++++|||||++|+++||+.||++ ++. |+|+.+....
T Consensus 339 r~~-~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~ 417 (481)
T PLN02554 339 RTK-DIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDL 417 (481)
T ss_pred Hhc-cCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccc
Confidence 775 455777999999999999999999999999999999999999999999999999955 666 9998775310
Q ss_pred ---CCcccCHHHHHHHHHHHHc-CChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHhh
Q 046553 164 ---SGLVIKREKVKEAIEKLMD-RGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQR 225 (232)
Q Consensus 164 ---~~~~~~~~~l~~~i~~vl~-d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~~ 225 (232)
....+++++|.++|+++|. |+ +||+||+++++++++++++|||++.++++||+++...
T Consensus 418 ~~~~~~~~~~e~l~~av~~vm~~~~----~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~~~~~ 479 (481)
T PLN02554 418 LAGEMETVTAEEIERGIRCLMEQDS----DVRKRVKEMSEKCHVALMDGGSSHTALKKFIQDVTKN 479 (481)
T ss_pred cccccCeEcHHHHHHHHHHHhcCCH----HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhh
Confidence 0124899999999999996 44 9999999999999999999999999999999998764
No 15
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.2e-39 Score=298.16 Aligned_cols=203 Identities=34% Similarity=0.607 Sum_probs=173.7
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCC-ccchhhhhhhhHHHHhcCCCeE
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERS-QGLEKWIQEEGLEERAKGRGFI 97 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~-~~~~~~~lp~~~~~~~~~~nv~ 97 (232)
+++++.+||+.++++++|||||||+..++.+++.+++.+|..++++|||+++..... .....+ +|+++.+++.+.+ +
T Consensus 266 ~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~~~~~~~~~~~~-lp~~~~er~~~rg-~ 343 (475)
T PLN02167 266 DRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEP-LPEGFMDRVMGRG-L 343 (475)
T ss_pred hhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEecCcccccchhhh-CChHHHHHhccCe-e
Confidence 356899999999889999999999998899999999999999999999999853211 001112 8889988886655 5
Q ss_pred EecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHH-HHh-hhhhccccc---CCCcccCHHH
Q 046553 98 IRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKL-AVQ-AAVTWGLED---KSGLVIKREK 172 (232)
Q Consensus 98 v~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~-v~~-G~g~~~~~~---~~~~~~~~~~ 172 (232)
+.+|+||..||+|+++++|||||||||++|++++|||||++|+++||+.||++ ++. |+|+.+... +.+..+++++
T Consensus 344 v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~ 423 (475)
T PLN02167 344 VCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADE 423 (475)
T ss_pred eeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHH
Confidence 66899999999999999999999999999999999999999999999999987 555 999877532 0012479999
Q ss_pred HHHHHHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHhhh
Q 046553 173 VKEAIEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQRT 226 (232)
Q Consensus 173 l~~~i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~~~ 226 (232)
|.++|+++|.++ +.||+||+++++.+++++.+||||+.++++||+.+...|
T Consensus 424 l~~av~~~m~~~---~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i~~~~ 474 (475)
T PLN02167 424 IAGAVRSLMDGE---DVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDLLGDH 474 (475)
T ss_pred HHHHHHHHhcCC---HHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcC
Confidence 999999999753 389999999999999999999999999999999998765
No 16
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=2.1e-39 Score=293.97 Aligned_cols=200 Identities=30% Similarity=0.516 Sum_probs=170.5
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCC-----ccchhh-hhhhhHHHHhc
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERS-----QGLEKW-IQEEGLEERAK 92 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~~~~~-~lp~~~~~~~~ 92 (232)
+++++.+||+.+++++||||||||...++.+++.+++.+|..++.+|||+++.+... ...+.+ .+|+++.++..
T Consensus 247 ~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~ 326 (455)
T PLN02152 247 QSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELE 326 (455)
T ss_pred cchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcccccccccccccccccchhHHHhcc
Confidence 356899999999889999999999999999999999999999999999999853110 000001 14678877764
Q ss_pred CCCeEEecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh--hhhhcccccCCCcccCH
Q 046553 93 GRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ--AAVTWGLEDKSGLVIKR 170 (232)
Q Consensus 93 ~~nv~v~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~--G~g~~~~~~~~~~~~~~ 170 (232)
.+..+.+|+||..+|+|+++++|||||||||+.|++++|||+|++|+++||+.||+++++ |+|+.+..++ ++.+++
T Consensus 327 -~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~-~~~~~~ 404 (455)
T PLN02152 327 -EVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENS-EGLVER 404 (455)
T ss_pred -CCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCc-CCcCcH
Confidence 455777999999999999999999999999999999999999999999999999999987 7777654322 224699
Q ss_pred HHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHH
Q 046553 171 EKVKEAIEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFV 222 (232)
Q Consensus 171 ~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l 222 (232)
++|.++|+++|+| ++++||+||++|++++++++.+||||++++++||+++
T Consensus 405 e~l~~av~~vm~~--~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 405 GEIRRCLEAVMEE--KSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred HHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 9999999999974 3568999999999999999999999999999999976
No 17
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=3e-39 Score=292.82 Aligned_cols=203 Identities=26% Similarity=0.483 Sum_probs=175.2
Q ss_pred hhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEe
Q 046553 20 DEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIR 99 (232)
Q Consensus 20 ~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~ 99 (232)
++++.+|||.+++++||||||||....+.+++.++..+|+..+.+|+|++..+...++...+ +|++|.+++++.++++.
T Consensus 239 ~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~-lp~~f~~r~~~~g~vv~ 317 (446)
T PLN00414 239 EDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEA-LPEGFEERVKGRGIVWE 317 (446)
T ss_pred HHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhh-CChhHHHHhcCCCeEEe
Confidence 46799999999999999999999999999999999999999999999999864221111223 89999999999999998
Q ss_pred cccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh--hhhhcccccCCCcccCHHHHHHHH
Q 046553 100 GWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ--AAVTWGLEDKSGLVIKREKVKEAI 177 (232)
Q Consensus 100 ~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~--G~g~~~~~~~~~~~~~~~~l~~~i 177 (232)
+|+||..||+|+++++|||||||||++|++++|||+|++|+++||+.||+++++ |+|+.+..++ ++.+++++|++++
T Consensus 318 ~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~-~~~~~~~~i~~~v 396 (446)
T PLN00414 318 GWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQRED-SGWFSKESLRDTV 396 (446)
T ss_pred ccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEecccc-CCccCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999974 9998875431 1248999999999
Q ss_pred HHHHcCC-hhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHhhhcc
Q 046553 178 EKLMDRG-KQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQRTRG 228 (232)
Q Consensus 178 ~~vl~d~-~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~~~~~ 228 (232)
+++|.++ ++++++|++++++++.+. ++||++ ..+.+||+++.....+
T Consensus 397 ~~~m~~~~e~g~~~r~~a~~~~~~~~---~~gg~s-s~l~~~v~~~~~~~~~ 444 (446)
T PLN00414 397 KSVMDKDSEIGNLVKRNHKKLKETLV---SPGLLS-GYADKFVEALENEVNN 444 (446)
T ss_pred HHHhcCChhhHHHHHHHHHHHHHHHH---cCCCcH-HHHHHHHHHHHHhccc
Confidence 9999875 568899999999999974 558833 3489999999766544
No 18
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=4.5e-39 Score=291.42 Aligned_cols=200 Identities=29% Similarity=0.448 Sum_probs=173.4
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEE
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFII 98 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v 98 (232)
.++++.+||+.++++++|||||||...++.+++.+++.+++..+.+|+|+.+.+........+ +|++|.+++.+.|+++
T Consensus 237 ~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~-lp~~f~~r~~~~g~~v 315 (442)
T PLN02208 237 LEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEG-LPEGFEERVKGRGVVW 315 (442)
T ss_pred CHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhh-CCHHHHHHHhcCCcEe
Confidence 367899999999889999999999999899989999888877888899988754211111122 8999999999999999
Q ss_pred ecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh--hhhhcccccCCCcccCHHHHHHH
Q 046553 99 RGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ--AAVTWGLEDKSGLVIKREKVKEA 176 (232)
Q Consensus 99 ~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~--G~g~~~~~~~~~~~~~~~~l~~~ 176 (232)
.+|+||..||+|+++++|||||||||+.|++++|||+|++|+++||+.||+++++ |+|+.+..++ ++.+++++|.++
T Consensus 316 ~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~-~~~~~~~~l~~a 394 (442)
T PLN02208 316 GGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK-TGWFSKESLSNA 394 (442)
T ss_pred eccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc-CCcCcHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998776 9998886532 234899999999
Q ss_pred HHHHHcCC-hhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHh
Q 046553 177 IEKLMDRG-KQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQ 224 (232)
Q Consensus 177 i~~vl~d~-~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~ 224 (232)
|+++|+++ ++++++|++++++++.+. .+|||+.++.+||+.+..
T Consensus 395 i~~~m~~~~e~g~~~r~~~~~~~~~~~----~~gsS~~~l~~~v~~l~~ 439 (442)
T PLN02208 395 IKSVMDKDSDLGKLVRSNHTKLKEILV----SPGLLTGYVDKFVEELQE 439 (442)
T ss_pred HHHHhcCCchhHHHHHHHHHHHHHHHh----cCCcHHHHHHHHHHHHHH
Confidence 99999876 578999999999999974 368999999999999854
No 19
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=7.3e-39 Score=290.89 Aligned_cols=186 Identities=33% Similarity=0.519 Sum_probs=165.1
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCC-CCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeE
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSIC-GLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFI 97 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~-~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~ 97 (232)
.+.++.+||+.++++++|||||||+. .++.+++.+++.++...+++|||+++..... . +|+++.++. +.|+.
T Consensus 259 ~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~~~-----~-l~~~~~~~~-~~~~~ 331 (448)
T PLN02562 259 EDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPVWRE-----G-LPPGYVERV-SKQGK 331 (448)
T ss_pred chHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCCchh-----h-CCHHHHHHh-ccCEE
Confidence 35678899999988899999999986 5789999999999999999999999753211 1 778877766 45778
Q ss_pred EecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh--hhhhcccccCCCcccCHHHHHH
Q 046553 98 IRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ--AAVTWGLEDKSGLVIKREKVKE 175 (232)
Q Consensus 98 v~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~--G~g~~~~~~~~~~~~~~~~l~~ 175 (232)
+.+|+||..+|+|+++++|||||||||+.|++++|||+|++|+++||+.||+++++ |+|+.+. + ++++++.+
T Consensus 332 v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~--~----~~~~~l~~ 405 (448)
T PLN02562 332 VVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS--G----FGQKEVEE 405 (448)
T ss_pred EEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC--C----CCHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999986 8887664 2 78999999
Q ss_pred HHHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHH
Q 046553 176 AIEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFV 222 (232)
Q Consensus 176 ~i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l 222 (232)
+|+++|.|+ +||+||++++++++.+ .+||||++++++||+++
T Consensus 406 ~v~~~l~~~----~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~ 447 (448)
T PLN02562 406 GLRKVMEDS----GMGERLMKLRERAMGE-EARLRSMMNFTTLKDEL 447 (448)
T ss_pred HHHHHhCCH----HHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHh
Confidence 999999877 9999999999999877 67899999999999986
No 20
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.4e-38 Score=289.57 Aligned_cols=200 Identities=34% Similarity=0.592 Sum_probs=173.3
Q ss_pred hhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCC-ccchhhhhhhhHHHHhcCCCeEEe
Q 046553 21 EQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERS-QGLEKWIQEEGLEERAKGRGFIIR 99 (232)
Q Consensus 21 ~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~-~~~~~~~lp~~~~~~~~~~nv~v~ 99 (232)
+++.+||+.+++++||||||||+..++.+++.+++.+|..++++|||+++..... .....+ +|+++.++++..++++.
T Consensus 266 ~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~-lp~~f~~~~~~rG~vv~ 344 (472)
T PLN02670 266 VRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEM-LPDGFEERVKGRGMIHV 344 (472)
T ss_pred HHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhc-CChHHHHhccCCCeEEe
Confidence 6799999999889999999999999999999999999999999999999853211 111112 89999999988999999
Q ss_pred cccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHH
Q 046553 100 GWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIE 178 (232)
Q Consensus 100 ~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~ 178 (232)
+|+||..||+|+++++|||||||||+.|++++|||+|++|+++||+.||+++++ |+|+.+...+.++.++.++|.++|+
T Consensus 345 ~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~av~ 424 (472)
T PLN02670 345 GWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAESVR 424 (472)
T ss_pred CcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998 9999876432123589999999999
Q ss_pred HHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHhhh
Q 046553 179 KLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQRT 226 (232)
Q Consensus 179 ~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~~~ 226 (232)
++|.| +++++||+||+++++.++.. +...+.++++++.+....
T Consensus 425 ~vm~~-~~g~~~r~~a~~l~~~~~~~----~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 425 LAMVD-DAGEEIRDKAKEMRNLFGDM----DRNNRYVDELVHYLRENR 467 (472)
T ss_pred HHhcC-cchHHHHHHHHHHHHHHhCc----chhHHHHHHHHHHHHHhc
Confidence 99986 56789999999999999855 445667888888877664
No 21
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=6.1e-38 Score=286.05 Aligned_cols=193 Identities=37% Similarity=0.628 Sum_probs=168.1
Q ss_pred hhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEe
Q 046553 20 DEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIR 99 (232)
Q Consensus 20 ~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~ 99 (232)
+.++..||+..+++++|||||||....+.+++.+++.+|+..+++|||+++.+. .++.++. +.|..+.
T Consensus 261 ~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~-----------~~~~~~~-~~~~~v~ 328 (459)
T PLN02448 261 EPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGEA-----------SRLKEIC-GDMGLVV 328 (459)
T ss_pred hhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCch-----------hhHhHhc-cCCEEEe
Confidence 358999999998899999999999888899999999999999999999876431 1222222 3467888
Q ss_pred cccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh--hhhhcccccC-CCcccCHHHHHHH
Q 046553 100 GWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ--AAVTWGLEDK-SGLVIKREKVKEA 176 (232)
Q Consensus 100 ~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~--G~g~~~~~~~-~~~~~~~~~l~~~ 176 (232)
+|+||..||+|+++++|||||||||+.||+++|||||++|+++||+.||+++++ |+|+.+.... .++.+++++|+++
T Consensus 329 ~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~a 408 (459)
T PLN02448 329 PWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAEL 408 (459)
T ss_pred ccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999987 8887664321 0124799999999
Q ss_pred HHHHHcCC-hhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHh
Q 046553 177 IEKLMDRG-KQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQ 224 (232)
Q Consensus 177 i~~vl~d~-~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~ 224 (232)
|+++|.|+ +++++||+||++|++++++++.+||||+++|++||+.+.+
T Consensus 409 v~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~ 457 (459)
T PLN02448 409 VKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQ 457 (459)
T ss_pred HHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 99999875 7889999999999999999999999999999999999864
No 22
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=5.3e-35 Score=269.10 Aligned_cols=181 Identities=28% Similarity=0.420 Sum_probs=134.9
Q ss_pred hhhHHHHhcCCCCCcEEEEEeCCCCCCC-HHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEE
Q 046553 20 DEQCLKWLDSWEPWSVIYACLGSICGLA-TWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFII 98 (232)
Q Consensus 20 ~~~l~~~l~~~~~~~vV~vs~GS~~~~~-~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v 98 (232)
++++..|++...++++|||||||..... .+....+++++.+++++|||.+.+.. +..+ ++|+.+
T Consensus 263 ~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~~----------~~~l-----~~n~~~ 327 (500)
T PF00201_consen 263 PEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGEP----------PENL-----PKNVLI 327 (500)
T ss_dssp HHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCSH----------GCHH-----HTTEEE
T ss_pred ccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCCCcccccccccc----------cccc-----cceEEE
Confidence 6788899998667899999999998643 44478899999999999999998732 1221 378999
Q ss_pred ecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHH
Q 046553 99 RGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAI 177 (232)
Q Consensus 99 ~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i 177 (232)
.+|+||.++|.||++++||||||+||+.||+++|||+|++|+++||+.||.++++ |+|+.++..+ ++.+++.++|
T Consensus 328 ~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~----~~~~~l~~ai 403 (500)
T PF00201_consen 328 VKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKND----LTEEELRAAI 403 (500)
T ss_dssp ESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-----SHHHHHHHH
T ss_pred eccccchhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecC----CcHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 9999998775 8999999999
Q ss_pred HHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHhhh
Q 046553 178 EKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQRT 226 (232)
Q Consensus 178 ~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~~~ 226 (232)
+++|+|+ +|++||++++.++++.. -+....+...++++.+.+
T Consensus 404 ~~vl~~~----~y~~~a~~ls~~~~~~p---~~p~~~~~~~ie~v~~~~ 445 (500)
T PF00201_consen 404 REVLENP----SYKENAKRLSSLFRDRP---ISPLERAVWWIEYVARHG 445 (500)
T ss_dssp HHHHHSH----HHHHHHHHHHHTTT------------------------
T ss_pred HHHHhhh----HHHHHHHHHHHHHhcCC---CCHHHHHHHHHHHHHhcC
Confidence 9999998 99999999999998663 223345556666655544
No 23
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=8e-33 Score=254.74 Aligned_cols=181 Identities=22% Similarity=0.303 Sum_probs=156.2
Q ss_pred hhhHHHHhcCCCCCcEEEEEeCCCCC---CCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCe
Q 046553 20 DEQCLKWLDSWEPWSVIYACLGSICG---LATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGF 96 (232)
Q Consensus 20 ~~~l~~~l~~~~~~~vV~vs~GS~~~---~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv 96 (232)
++++.+|++.. ++++||+||||... ++.+.+..+++++.+.+++|||..++... +. ..++|+
T Consensus 284 ~~~l~~fl~~~-~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~~---------~~-----~~p~Nv 348 (507)
T PHA03392 284 DDYLEEFLNNS-TNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVE---------AI-----NLPANV 348 (507)
T ss_pred CHHHHHHHhcC-CCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCcC---------cc-----cCCCce
Confidence 67899999986 45899999999864 46788899999999999999999975432 10 125799
Q ss_pred EEecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHH
Q 046553 97 IIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKE 175 (232)
Q Consensus 97 ~v~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~ 175 (232)
.+.+|+||.++|+|+.+++||||||.||++||+++|||+|++|+++||+.||+++++ |+|+.++..+ ++.++|.+
T Consensus 349 ~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~----~t~~~l~~ 424 (507)
T PHA03392 349 LTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVT----VSAAQLVL 424 (507)
T ss_pred EEecCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCC----cCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 9999988765 89999999
Q ss_pred HHHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHhhh
Q 046553 176 AIEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQRT 226 (232)
Q Consensus 176 ~i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~~~ 226 (232)
+|+++|+|+ +|++||+++++.++.. .-+....+...++.+.+.+
T Consensus 425 ai~~vl~~~----~y~~~a~~ls~~~~~~---p~~~~~~av~~iE~v~r~~ 468 (507)
T PHA03392 425 AIVDVIENP----KYRKNLKELRHLIRHQ---PMTPLHKAIWYTEHVIRNK 468 (507)
T ss_pred HHHHHhCCH----HHHHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHhCC
Confidence 999999998 9999999999999965 3334455667777766554
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=99.96 E-value=2.9e-29 Score=230.55 Aligned_cols=168 Identities=36% Similarity=0.588 Sum_probs=139.1
Q ss_pred hHHHHhcCCCCC--cEEEEEeCCCC---CCCHHHHHHHHHHHhhC-CCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCC
Q 046553 22 QCLKWLDSWEPW--SVIYACLGSIC---GLATWQLLELGLGLEAS-SQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRG 95 (232)
Q Consensus 22 ~l~~~l~~~~~~--~vV~vs~GS~~---~~~~~~~~~l~~~l~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~n 95 (232)
...+|++..+.. ++|||||||+. .++.+....++.++.+. +++|+|++....... +++++.++ ...|
T Consensus 264 ~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~~~------~~~~~~~~-~~~n 336 (496)
T KOG1192|consen 264 LPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDDSIY------FPEGLPNR-GRGN 336 (496)
T ss_pred ccHHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCcchh------hhhcCCCC-CcCc
Confidence 456777766655 89999999999 68899999999999999 888999998754321 22332211 2457
Q ss_pred eEEecccchhhh-hcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHH
Q 046553 96 FIIRGWAPQVLL-LSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKV 173 (232)
Q Consensus 96 v~v~~~~pq~~l-L~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l 173 (232)
+...+|+||..+ |+|+++++||||||+||++|++++|||+|++|+++||+.||+++++ |.+......+ .+...+
T Consensus 337 V~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~----~~~~~~ 412 (496)
T KOG1192|consen 337 VVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRD----LVSEEL 412 (496)
T ss_pred eEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhh----cCcHHH
Confidence 888899999998 6999999999999999999999999999999999999999999999 6555555443 555559
Q ss_pred HHHHHHHHcCChhhHHHHHHHHHHHHHHHhh
Q 046553 174 KEAIEKLMDRGKQGEKRRKRTRQLGEIANRA 204 (232)
Q Consensus 174 ~~~i~~vl~d~~~~~~~~~~a~~l~~~~~~~ 204 (232)
..++.+++.++ +|+++++++++.++..
T Consensus 413 ~~~~~~il~~~----~y~~~~~~l~~~~~~~ 439 (496)
T KOG1192|consen 413 LEAIKEILENE----EYKEAAKRLSEILRDQ 439 (496)
T ss_pred HHHHHHHHcCh----HHHHHHHHHHHHHHcC
Confidence 99999999998 9999999999998854
No 25
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.95 E-value=2.5e-27 Score=213.04 Aligned_cols=177 Identities=21% Similarity=0.273 Sum_probs=151.0
Q ss_pred hhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEe
Q 046553 20 DEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIR 99 (232)
Q Consensus 20 ~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~ 99 (232)
..+...|.. .++++||+|+||.... .+.+..+++++...+.++|+..+. ... ... ..+.|+.+.
T Consensus 226 ~~~~~~~~~--~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~-~~~-~~~-----------~~p~n~~v~ 289 (406)
T COG1819 226 ANELPYWIP--ADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGG-ARD-TLV-----------NVPDNVIVA 289 (406)
T ss_pred cccCcchhc--CCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEeccc-ccc-ccc-----------cCCCceEEe
Confidence 444445533 3689999999999977 777888999999999999999876 211 111 125799999
Q ss_pred cccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHH
Q 046553 100 GWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIE 178 (232)
Q Consensus 100 ~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~ 178 (232)
+|+||..+|+++++ ||||||+||++||+++|||+|++|...||+.||.++++ |.|+.+..++ ++.+.++++|+
T Consensus 290 ~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~----l~~~~l~~av~ 363 (406)
T COG1819 290 DYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEE----LTEERLRAAVN 363 (406)
T ss_pred cCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCccc----CCHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999 9999998876 89999999999
Q ss_pred HHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHhhhc
Q 046553 179 KLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQRTR 227 (232)
Q Consensus 179 ~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~~~~ 227 (232)
++|+|+ .|+++++++++.++.. +| ...+.+++++...+..
T Consensus 364 ~vL~~~----~~~~~~~~~~~~~~~~---~g--~~~~a~~le~~~~~~~ 403 (406)
T COG1819 364 EVLADD----SYRRAAERLAEEFKEE---DG--PAKAADLLEEFAREKK 403 (406)
T ss_pred HHhcCH----HHHHHHHHHHHHhhhc---cc--HHHHHHHHHHHHhccc
Confidence 999998 9999999999999966 56 4467788887665543
No 26
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.94 E-value=1.9e-25 Score=199.90 Aligned_cols=173 Identities=21% Similarity=0.268 Sum_probs=144.5
Q ss_pred HHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccc
Q 046553 24 LKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAP 103 (232)
Q Consensus 24 ~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~p 103 (232)
..|....+++++|||++||+.......+..+++++.+.+.+++|.++..... ..+. ..++|+.+.+|+|
T Consensus 216 ~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~---------~~~~--~~~~~v~~~~~~p 284 (392)
T TIGR01426 216 GSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDP---------ADLG--ELPPNVEVRQWVP 284 (392)
T ss_pred CCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCCh---------hHhc--cCCCCeEEeCCCC
Confidence 3587777788999999999876666678889999999999999998754321 1111 1257899999999
Q ss_pred hhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHHHc
Q 046553 104 QVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKLMD 182 (232)
Q Consensus 104 q~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~vl~ 182 (232)
+..+|+++++ +|||||+||++|++++|+|+|++|...||+.||+++++ |+|+.+...+ ++.+++.++|+++|.
T Consensus 285 ~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~----~~~~~l~~ai~~~l~ 358 (392)
T TIGR01426 285 QLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEE----VTAEKLREAVLAVLS 358 (392)
T ss_pred HHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEecccc----CCHHHHHHHHHHHhc
Confidence 9999999988 99999999999999999999999999999999999999 9999887655 899999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHH
Q 046553 183 RGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFV 222 (232)
Q Consensus 183 d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l 222 (232)
|+ +|+++++++++.++.. +|.. .+.++|..+
T Consensus 359 ~~----~~~~~~~~l~~~~~~~---~~~~--~aa~~i~~~ 389 (392)
T TIGR01426 359 DP----RYAERLRKMRAEIREA---GGAR--RAADEIEGF 389 (392)
T ss_pred CH----HHHHHHHHHHHHHHHc---CCHH--HHHHHHHHh
Confidence 88 8999999999999854 4543 555555544
No 27
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.93 E-value=9.2e-25 Score=195.55 Aligned_cols=158 Identities=18% Similarity=0.188 Sum_probs=132.4
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCCCCC-HHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeE
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSICGLA-TWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFI 97 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~~~~-~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~ 97 (232)
.+.++..|++. ++++|||++||+.... ...+..+++++...+.+++|.++..... . ...++|+.
T Consensus 227 ~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~---------~----~~~~~~v~ 291 (401)
T cd03784 227 PPPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGLG---------A----EDLPDNVR 291 (401)
T ss_pred CCHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCcccc---------c----cCCCCceE
Confidence 46677888865 5789999999998754 4566778899988899999999865421 0 01257999
Q ss_pred EecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHH
Q 046553 98 IRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEA 176 (232)
Q Consensus 98 v~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~ 176 (232)
+.+|+||..+|+++++ ||||||+||++|++++|+|+|++|+..||+.||+++++ |+|+.+...+ ++.+.|.++
T Consensus 292 ~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~----~~~~~l~~a 365 (401)
T cd03784 292 VVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRE----LTAERLAAA 365 (401)
T ss_pred EeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCccc----CCHHHHHHH
Confidence 9999999999999998 99999999999999999999999999999999999999 9999887764 799999999
Q ss_pred HHHHHcCChhhHHHHHHHHHHHHHHH
Q 046553 177 IEKLMDRGKQGEKRRKRTRQLGEIAN 202 (232)
Q Consensus 177 i~~vl~d~~~~~~~~~~a~~l~~~~~ 202 (232)
+++++++ .+++++.++.+.++
T Consensus 366 l~~~l~~-----~~~~~~~~~~~~~~ 386 (401)
T cd03784 366 LRRLLDP-----PSRRRAAALLRRIR 386 (401)
T ss_pred HHHHhCH-----HHHHHHHHHHHHHH
Confidence 9999984 45566666666665
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.73 E-value=5.4e-17 Score=143.76 Aligned_cols=144 Identities=16% Similarity=0.184 Sum_probs=110.6
Q ss_pred hHHHHhcCCCCCcEEEEEeCCCCCCC-HHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEec
Q 046553 22 QCLKWLDSWEPWSVIYACLGSICGLA-TWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRG 100 (232)
Q Consensus 22 ~l~~~l~~~~~~~vV~vs~GS~~~~~-~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~ 100 (232)
...+.+...+++++|+|++||++... ++.+..++..+.. +++++|++|... +.+... . ..++.+.+
T Consensus 174 ~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~---------~~~~~~-~--~~~~~~~~ 240 (352)
T PRK12446 174 KGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGN---------LDDSLQ-N--KEGYRQFE 240 (352)
T ss_pred HHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCch---------HHHHHh-h--cCCcEEec
Confidence 33344455567889999999999855 4545555555532 489999998653 111111 1 13455667
Q ss_pred cc-chh-hhhcccCcceEEecCCchhHHHHHHhCCCeeecccc-----cchhHHHHHHHh-hhhhcccccCCCcccCHHH
Q 046553 101 WA-PQV-LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLF-----AEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREK 172 (232)
Q Consensus 101 ~~-pq~-~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~-----~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~ 172 (232)
|+ +.+ .++.++++ +|||+|++|+.|++++|+|+|++|+. .||..||+.+++ |++..+..++ ++++.
T Consensus 241 f~~~~m~~~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~----~~~~~ 314 (352)
T PRK12446 241 YVHGELPDILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEED----VTVNS 314 (352)
T ss_pred chhhhHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhc----CCHHH
Confidence 87 555 58999998 99999999999999999999999985 489999999999 9999887665 89999
Q ss_pred HHHHHHHHHcCC
Q 046553 173 VKEAIEKLMDRG 184 (232)
Q Consensus 173 l~~~i~~vl~d~ 184 (232)
+.+++.+++.|+
T Consensus 315 l~~~l~~ll~~~ 326 (352)
T PRK12446 315 LIKHVEELSHNN 326 (352)
T ss_pred HHHHHHHHHcCH
Confidence 999999999875
No 29
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.73 E-value=3.1e-17 Score=144.99 Aligned_cols=150 Identities=20% Similarity=0.189 Sum_probs=121.4
Q ss_pred CCcEEEEEeCCCCCCC-HHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCC-eEEecccchh-hhh
Q 046553 32 PWSVIYACLGSICGLA-TWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRG-FIIRGWAPQV-LLL 108 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~-~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~n-v~v~~~~pq~-~lL 108 (232)
++++|+|..||+++.. ++.+......+.+ .+++++.+|.... +.+.......+ +.+.+|.+++ .+|
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~~----------~~~~~~~~~~~~~~v~~f~~dm~~~~ 250 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKNDL----------EELKSAYNELGVVRVLPFIDDMAALL 250 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcchH----------HHHHHHHhhcCcEEEeeHHhhHHHHH
Confidence 6889999999999855 5556666666654 6899999887641 22333333334 7788899888 588
Q ss_pred cccCcceEEecCCchhHHHHHHhCCCeeecccc----cchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHHHcC
Q 046553 109 SHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLF----AEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 109 ~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~----~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d 183 (232)
..+++ +||++|++|+.|+++.|+|.|++|+. .||..||+.+++ |+|.++...+ ++++.+.+.|.+++.+
T Consensus 251 ~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~----lt~~~l~~~i~~l~~~ 324 (357)
T COG0707 251 AAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSE----LTPEKLAELILRLLSN 324 (357)
T ss_pred HhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEecccc----CCHHHHHHHHHHHhcC
Confidence 88888 99999999999999999999999974 489999999999 9999999886 9999999999999998
Q ss_pred ChhhHHHHHHHHHHH
Q 046553 184 GKQGEKRRKRTRQLG 198 (232)
Q Consensus 184 ~~~~~~~~~~a~~l~ 198 (232)
+++.+.|+++++++.
T Consensus 325 ~~~l~~m~~~a~~~~ 339 (357)
T COG0707 325 PEKLKAMAENAKKLG 339 (357)
T ss_pred HHHHHHHHHHHHhcC
Confidence 877777777766653
No 30
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.67 E-value=3e-18 Score=136.05 Aligned_cols=138 Identities=20% Similarity=0.204 Sum_probs=98.1
Q ss_pred EEEEEeCCCCCCC-HHHHHHHHHHHhh--CCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchh-hhhcc
Q 046553 35 VIYACLGSICGLA-TWQLLELGLGLEA--SSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQV-LLLSH 110 (232)
Q Consensus 35 vV~vs~GS~~~~~-~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~-~lL~~ 110 (232)
+|+|++||.+... ++.+..+...+.. ..++|++.+|...... ....+. -...++.+.+|.+++ .++..
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~------~~~~~~--~~~~~v~~~~~~~~m~~~m~~ 72 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEE------LKIKVE--NFNPNVKVFGFVDNMAELMAA 72 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHH------HCCCHC--CTTCCCEEECSSSSHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHH------HHHHHh--ccCCcEEEEechhhHHHHHHH
Confidence 5899999998632 2223333343333 2579999998763211 111110 012688999999955 69999
Q ss_pred cCcceEEecCCchhHHHHHHhCCCeeeccccc----chhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHHHcCCh
Q 046553 111 RAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFA----EQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKLMDRGK 185 (232)
Q Consensus 111 ~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~----DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d~~ 185 (232)
+++ +|||||++|++|++++|+|+|++|... +|..||..+++ |+|..+.... .+.+.|.+.|.+++.++.
T Consensus 73 aDl--vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~----~~~~~L~~~i~~l~~~~~ 146 (167)
T PF04101_consen 73 ADL--VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESE----LNPEELAEAIEELLSDPE 146 (167)
T ss_dssp HSE--EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC-----SCCCHHHHHHCHCCCHH
T ss_pred cCE--EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCccc----CCHHHHHHHHHHHHcCcH
Confidence 998 999999999999999999999999988 99999999999 9999887765 678899999999998763
Q ss_pred h
Q 046553 186 Q 186 (232)
Q Consensus 186 ~ 186 (232)
+
T Consensus 147 ~ 147 (167)
T PF04101_consen 147 K 147 (167)
T ss_dssp -
T ss_pred H
Confidence 3
No 31
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.49 E-value=2e-13 Score=118.50 Aligned_cols=121 Identities=19% Similarity=0.249 Sum_probs=96.9
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHHhhCC-CcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEeccc-ch-hhhh
Q 046553 32 PWSVIYACLGSICGLATWQLLELGLGLEASS-QPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWA-PQ-VLLL 108 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~-~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~-pq-~~lL 108 (232)
+++.|+|++|..... .+++++...+ ++|++. +.... - ...+|+.+..|. +. ..+|
T Consensus 191 ~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~~--------~-------~~~~ni~~~~~~~~~~~~~m 248 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNAA--------D-------PRPGNIHVRPFSTPDFAELM 248 (318)
T ss_pred CCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCcc--------c-------ccCCCEEEeecChHHHHHHH
Confidence 467899999988743 4556666655 676666 54321 0 125789988876 44 3689
Q ss_pred cccCcceEEecCCchhHHHHHHhCCCeeeccc--ccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHH
Q 046553 109 SHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPL--FAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKL 180 (232)
Q Consensus 109 ~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~--~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~v 180 (232)
..|++ +|+|||.+|++|++++|+|+|++|. ..+|..||+.+++ |+|+.+..++ ++++.|.+.|+++
T Consensus 249 ~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~----~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 249 AAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQED----LTPERLAEFLERL 317 (318)
T ss_pred HhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEccccc----CCHHHHHHHHhcC
Confidence 89988 9999999999999999999999999 7899999999999 9999988765 8999999998764
No 32
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.45 E-value=5.4e-13 Score=116.66 Aligned_cols=124 Identities=19% Similarity=0.137 Sum_probs=88.9
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccc-hh-hhhc
Q 046553 32 PWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAP-QV-LLLS 109 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~p-q~-~lL~ 109 (232)
+++.|+|.+||... ..+++++.+.+. +.+.++.... ..+. ...|+.+.+|.| ++ .+|.
T Consensus 187 ~~~~iLv~~g~~~~------~~l~~~l~~~~~-~~~i~~~~~~--------~~~~-----~~~~v~~~~~~~~~~~~~l~ 246 (321)
T TIGR00661 187 GEDYILVYIGFEYR------YKILELLGKIAN-VKFVCYSYEV--------AKNS-----YNENVEIRRITTDNFKELIK 246 (321)
T ss_pred CCCcEEEECCcCCH------HHHHHHHHhCCC-eEEEEeCCCC--------Cccc-----cCCCEEEEECChHHHHHHHH
Confidence 35677788888652 344566655543 2333332221 1111 136888889997 33 6778
Q ss_pred ccCcceEEecCCchhHHHHHHhCCCeeeccccc--chhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHHHcCC
Q 046553 110 HRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFA--EQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKLMDRG 184 (232)
Q Consensus 110 ~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~--DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d~ 184 (232)
.|++ +|||||.+|++|++++|+|++++|... ||..||+.+++ |+|+.++..+ . ++.+++.++++|+
T Consensus 247 ~ad~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~----~---~~~~~~~~~~~~~ 315 (321)
T TIGR00661 247 NAEL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKE----L---RLLEAILDIRNMK 315 (321)
T ss_pred hCCE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhh----H---HHHHHHHhccccc
Confidence 8888 999999999999999999999999854 89999999999 9999887653 3 6666777777765
No 33
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.42 E-value=3.5e-12 Score=112.51 Aligned_cols=149 Identities=17% Similarity=0.155 Sum_probs=102.7
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCC--cEEEEEcCCCCCccchhhhhhhhHHHHhc-CCCeEEecccch-hh
Q 046553 31 EPWSVIYACLGSICGLATWQLLELGLGLEASSQ--PFIWVIRGGERSQGLEKWIQEEGLEERAK-GRGFIIRGWAPQ-VL 106 (232)
Q Consensus 31 ~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~--~~i~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq-~~ 106 (232)
++.++|++..|+..... ....+.+++.+... .+++.+|.... +.+.+... +-++.+.+|+++ ..
T Consensus 181 ~~~~~i~~~gg~~~~~~--~~~~l~~a~~~~~~~~~~~~~~G~g~~----------~~~~~~~~~~~~v~~~g~~~~~~~ 248 (357)
T PRK00726 181 EGKPTLLVVGGSQGARV--LNEAVPEALALLPEALQVIHQTGKGDL----------EEVRAAYAAGINAEVVPFIDDMAA 248 (357)
T ss_pred CCCeEEEEECCcHhHHH--HHHHHHHHHHHhhhCcEEEEEcCCCcH----------HHHHHHhhcCCcEEEeehHhhHHH
Confidence 34567777666654221 11222244433322 45566665532 22222221 223778889854 47
Q ss_pred hhcccCcceEEecCCchhHHHHHHhCCCeeeccc----ccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHHH
Q 046553 107 LLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPL----FAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKLM 181 (232)
Q Consensus 107 lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~----~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~vl 181 (232)
++..+++ +|+|+|.++++||+++|+|+|++|. .++|..|+..+.+ |.|+.+..++ ++++.+.++|.+++
T Consensus 249 ~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~----~~~~~l~~~i~~ll 322 (357)
T PRK00726 249 AYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSD----LTPEKLAEKLLELL 322 (357)
T ss_pred HHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEccc----CCHHHHHHHHHHHH
Confidence 9999999 9999999999999999999999997 4689999999999 9999887654 67999999999999
Q ss_pred cCChhhHHHHHHHHHH
Q 046553 182 DRGKQGEKRRKRTRQL 197 (232)
Q Consensus 182 ~d~~~~~~~~~~a~~l 197 (232)
+|++..++|+++++++
T Consensus 323 ~~~~~~~~~~~~~~~~ 338 (357)
T PRK00726 323 SDPERLEAMAEAARAL 338 (357)
T ss_pred cCHHHHHHHHHHHHhc
Confidence 9985555555554443
No 34
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.39 E-value=1.2e-11 Score=111.10 Aligned_cols=157 Identities=11% Similarity=0.073 Sum_probs=112.4
Q ss_pred HHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhh--CCCcEEEEEcCCCCCccchhhhhhhhHHHHh-cCCCeEEe
Q 046553 23 CLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEA--SSQPFIWVIRGGERSQGLEKWIQEEGLEERA-KGRGFIIR 99 (232)
Q Consensus 23 l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~ 99 (232)
...-+...+++++|+++.|+.+.. ..+..+++++.+ .+.++++.+|.... +-+.+.+.. ...++.+.
T Consensus 192 ~~~~~~l~~~~~~ilv~~G~lg~~--k~~~~li~~~~~~~~~~~~vvv~G~~~~--------l~~~l~~~~~~~~~v~~~ 261 (391)
T PRK13608 192 WLIDNNLDPDKQTILMSAGAFGVS--KGFDTMITDILAKSANAQVVMICGKSKE--------LKRSLTAKFKSNENVLIL 261 (391)
T ss_pred HHHHcCCCCCCCEEEEECCCcccc--hhHHHHHHHHHhcCCCceEEEEcCCCHH--------HHHHHHHHhccCCCeEEE
Confidence 333344445678888889998742 234444444322 34677777664421 222333222 24578888
Q ss_pred cccchh-hhhcccCcceEEecCCchhHHHHHHhCCCeeec-ccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHH
Q 046553 100 GWAPQV-LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTR-PLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEA 176 (232)
Q Consensus 100 ~~~pq~-~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~-P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~ 176 (232)
+|.+++ .++..+++ +|+..|..|+.||+++|+|+|+. |..++|..|+..+.+ |+|+... +.+++.++
T Consensus 262 G~~~~~~~~~~~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~--------~~~~l~~~ 331 (391)
T PRK13608 262 GYTKHMNEWMASSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIAD--------TPEEAIKI 331 (391)
T ss_pred eccchHHHHHHhhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEeC--------CHHHHHHH
Confidence 999876 58889998 99999999999999999999998 777778899999999 9997632 57889999
Q ss_pred HHHHHcCChhhHHHHHHHHHHHH
Q 046553 177 IEKLMDRGKQGEKRRKRTRQLGE 199 (232)
Q Consensus 177 i~~vl~d~~~~~~~~~~a~~l~~ 199 (232)
|.++++|++..++|++|+.+++.
T Consensus 332 i~~ll~~~~~~~~m~~~~~~~~~ 354 (391)
T PRK13608 332 VASLTNGNEQLTNMISTMEQDKI 354 (391)
T ss_pred HHHHhcCHHHHHHHHHHHHHhcC
Confidence 99999988777777777776543
No 35
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.36 E-value=1.2e-11 Score=108.45 Aligned_cols=156 Identities=16% Similarity=0.154 Sum_probs=108.1
Q ss_pred HhcCCCCCcEEEEEeCCCCCCC-HHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhc--CCCeEEeccc
Q 046553 26 WLDSWEPWSVIYACLGSICGLA-TWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAK--GRGFIIRGWA 102 (232)
Q Consensus 26 ~l~~~~~~~vV~vs~GS~~~~~-~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~--~~nv~v~~~~ 102 (232)
.+...+++++|++.+|+..... .+.+...+..+.+.+..+++.+|.... +.+.+... ..|+.+.+|.
T Consensus 174 ~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~~----------~~l~~~~~~~~~~v~~~g~~ 243 (350)
T cd03785 174 RLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGDL----------EEVKKAYEELGVNYEVFPFI 243 (350)
T ss_pred hcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCccH----------HHHHHHHhccCCCeEEeehh
Confidence 3344445667777777765322 122223344444334566667765421 22222221 3689999998
Q ss_pred ch-hhhhcccCcceEEecCCchhHHHHHHhCCCeeeccc----ccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHH
Q 046553 103 PQ-VLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPL----FAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEA 176 (232)
Q Consensus 103 pq-~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~----~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~ 176 (232)
.. ..+|..+++ +|+++|.+++.||+++|+|+|++|. ..+|..|+..+.+ |.|..+...+ .+.+++.++
T Consensus 244 ~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~----~~~~~l~~~ 317 (350)
T cd03785 244 DDMAAAYAAADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEE----LTPERLAAA 317 (350)
T ss_pred hhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCC----CCHHHHHHH
Confidence 44 468999998 9999999999999999999999986 4678999999999 9998877543 579999999
Q ss_pred HHHHHcCChhhHHHHHHHHHH
Q 046553 177 IEKLMDRGKQGEKRRKRTRQL 197 (232)
Q Consensus 177 i~~vl~d~~~~~~~~~~a~~l 197 (232)
|+++++|++..+.|++++++.
T Consensus 318 i~~ll~~~~~~~~~~~~~~~~ 338 (350)
T cd03785 318 LLELLSDPERLKAMAEAARSL 338 (350)
T ss_pred HHHHhcCHHHHHHHHHHHHhc
Confidence 999999886666666665543
No 36
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.34 E-value=4e-11 Score=107.24 Aligned_cols=159 Identities=13% Similarity=0.102 Sum_probs=108.4
Q ss_pred hhhHHHHhcCCCCCcEEEEEeCCCCCCCHH-HHHHHHHHHh-----hCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcC
Q 046553 20 DEQCLKWLDSWEPWSVIYACLGSICGLATW-QLLELGLGLE-----ASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKG 93 (232)
Q Consensus 20 ~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~-~~~~l~~~l~-----~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~ 93 (232)
..++.+-+...+++++|++..|+.+..... .+..+...+. ..+.++++.+|.+.. +-+.+.+....
T Consensus 193 ~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~--------~~~~L~~~~~~ 264 (382)
T PLN02605 193 KDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK--------LQSKLESRDWK 264 (382)
T ss_pred HHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH--------HHHHHHhhccc
Confidence 345555566556778888888877754422 2333332221 234567777775421 22233322223
Q ss_pred CCeEEecccchh-hhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchh-HHHHHHHh-hhhhcccccCCCcccCH
Q 046553 94 RGFIIRGWAPQV-LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQF-YNDKLAVQ-AAVTWGLEDKSGLVIKR 170 (232)
Q Consensus 94 ~nv~v~~~~pq~-~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~-~nA~~v~~-G~g~~~~~~~~~~~~~~ 170 (232)
.++.+.+|++++ .++..+++ +|+.+|.+|+.||+++|+|+|+.+....|. .|+..+.+ |.|+.. -++
T Consensus 265 ~~v~~~G~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~--------~~~ 334 (382)
T PLN02605 265 IPVKVRGFVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDNGFGAFS--------ESP 334 (382)
T ss_pred CCeEEEeccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhCCceeec--------CCH
Confidence 568888999877 58888888 999999999999999999999988655554 79999998 988754 258
Q ss_pred HHHHHHHHHHHcC-ChhhHHHHHHHHH
Q 046553 171 EKVKEAIEKLMDR-GKQGEKRRKRTRQ 196 (232)
Q Consensus 171 ~~l~~~i~~vl~d-~~~~~~~~~~a~~ 196 (232)
+.+.++|.+++.| ++..+.|++++++
T Consensus 335 ~~la~~i~~ll~~~~~~~~~m~~~~~~ 361 (382)
T PLN02605 335 KEIARIVAEWFGDKSDELEAMSENALK 361 (382)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 8999999999987 6444455555444
No 37
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.27 E-value=1.3e-10 Score=103.50 Aligned_cols=154 Identities=16% Similarity=0.135 Sum_probs=109.4
Q ss_pred HHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhC-CCcEEEEEcCCCCCccchhhhhhhhHHHHh--cCCCeEEe
Q 046553 23 CLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEAS-SQPFIWVIRGGERSQGLEKWIQEEGLEERA--KGRGFIIR 99 (232)
Q Consensus 23 l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~--~~~nv~v~ 99 (232)
+..-+...+++++|++..|+.+.. +.+..+++++.+. +.++++.++.+.. +.+.+.+.. .+.++.+.
T Consensus 192 ~~~~~~l~~~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~~--------~~~~l~~~~~~~~~~v~~~ 261 (380)
T PRK13609 192 IYNKYQLCPNKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNEA--------LKQSLEDLQETNPDALKVF 261 (380)
T ss_pred HHHHcCCCCCCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCHH--------HHHHHHHHHhcCCCcEEEE
Confidence 333344444567888888888753 2345566666543 5677777664321 222333222 13579999
Q ss_pred cccchh-hhhcccCcceEEecCCchhHHHHHHhCCCeeec-ccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHH
Q 046553 100 GWAPQV-LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTR-PLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEA 176 (232)
Q Consensus 100 ~~~pq~-~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~-P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~ 176 (232)
+|+++. .++..+++ +|+.+|..|+.||+++|+|+|+. |..+.+..|+..+.+ |+++.. .+.+++.++
T Consensus 262 g~~~~~~~l~~~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~G~~~~~--------~~~~~l~~~ 331 (380)
T PRK13609 262 GYVENIDELFRVTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERKGAAVVI--------RDDEEVFAK 331 (380)
T ss_pred echhhHHHHHHhccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhCCcEEEE--------CCHHHHHHH
Confidence 999876 68999998 99999999999999999999984 777788899999988 988753 247889999
Q ss_pred HHHHHcCChhhHHHHHHHHH
Q 046553 177 IEKLMDRGKQGEKRRKRTRQ 196 (232)
Q Consensus 177 i~~vl~d~~~~~~~~~~a~~ 196 (232)
|.++++|++..++|++++.+
T Consensus 332 i~~ll~~~~~~~~m~~~~~~ 351 (380)
T PRK13609 332 TEALLQDDMKLLQMKEAMKS 351 (380)
T ss_pred HHHHHCCHHHHHHHHHHHHH
Confidence 99999988666666666554
No 38
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.20 E-value=2.7e-10 Score=99.70 Aligned_cols=88 Identities=23% Similarity=0.258 Sum_probs=72.0
Q ss_pred chhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccc---cchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHH
Q 046553 103 PQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLF---AEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIE 178 (232)
Q Consensus 103 pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~---~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~ 178 (232)
+-..+|..+++ +|+++|.+++.||+++|+|+|++|.. .+|..|+..+.+ |.|..+...+ .+++.+.+++.
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~----~~~~~l~~~i~ 316 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKE----LLPEKLLEALL 316 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEeccc----CCHHHHHHHHH
Confidence 34578999998 99999988999999999999999863 468889999999 9998776543 57999999999
Q ss_pred HHHcCChhhHHHHHHHHH
Q 046553 179 KLMDRGKQGEKRRKRTRQ 196 (232)
Q Consensus 179 ~vl~d~~~~~~~~~~a~~ 196 (232)
++++|++..++|.+++++
T Consensus 317 ~ll~~~~~~~~~~~~~~~ 334 (348)
T TIGR01133 317 KLLLDPANLEAMAEAARK 334 (348)
T ss_pred HHHcCHHHHHHHHHHHHh
Confidence 999988555555555544
No 39
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.08 E-value=8.6e-10 Score=94.81 Aligned_cols=105 Identities=15% Similarity=0.116 Sum_probs=78.8
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHHHhh--CCCcEEEEEcCCCCCccchhhhhhhhHHHHh-cCCCeEEecccchh-hhh
Q 046553 33 WSVIYACLGSICGLATWQLLELGLGLEA--SSQPFIWVIRGGERSQGLEKWIQEEGLEERA-KGRGFIIRGWAPQV-LLL 108 (232)
Q Consensus 33 ~~vV~vs~GS~~~~~~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq~-~lL 108 (232)
.+.|+|+||...... ....+++++.+ .+.++.+++|.... ..+.+.+.. ..+|+.+..|++++ .+|
T Consensus 170 ~~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~~~--------~~~~l~~~~~~~~~i~~~~~~~~m~~lm 239 (279)
T TIGR03590 170 LRRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSSNP--------NLDELKKFAKEYPNIILFIDVENMAELM 239 (279)
T ss_pred cCeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCCCc--------CHHHHHHHHHhCCCEEEEeCHHHHHHHH
Confidence 357889998665432 33445566554 35678888886543 223333322 24689999999988 689
Q ss_pred cccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHH
Q 046553 109 SHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKL 150 (232)
Q Consensus 109 ~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~ 150 (232)
..+++ +|++|| +|++|+++.|+|+|++|...+|..||+.
T Consensus 240 ~~aDl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 240 NEADL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred HHCCE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 99999 999999 9999999999999999999999999975
No 40
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.07 E-value=3.8e-09 Score=94.76 Aligned_cols=167 Identities=12% Similarity=0.002 Sum_probs=112.1
Q ss_pred hHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhh---C--CCcEEEEEcCCCCCccchhhhhhhhHHHHhc-CCC
Q 046553 22 QCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEA---S--SQPFIWVIRGGERSQGLEKWIQEEGLEERAK-GRG 95 (232)
Q Consensus 22 ~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~---~--~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~-~~n 95 (232)
+..+-+...+++++|.+..||....-......+++++.. . +.++++.......... + +.+.+... ...
T Consensus 180 ~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~~~~-----~-~~~~~~~~~~~~ 253 (385)
T TIGR00215 180 SAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKRRLQ-----F-EQIKAEYGPDLQ 253 (385)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchhHHH-----H-HHHHHHhCCCCc
Confidence 344444555567888888899886423344445544432 2 3456554433221100 1 11111111 122
Q ss_pred eEEecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeec----cccc---------chhHHHHHHHh-hhhhcccc
Q 046553 96 FIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTR----PLFA---------EQFYNDKLAVQ-AAVTWGLE 161 (232)
Q Consensus 96 v~v~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~----P~~~---------DQ~~nA~~v~~-G~g~~~~~ 161 (232)
+.+..+ +...++..+++ +|+.+|+.|+ |++++|+|+|++ |+.. .|..|+..+.. ++...+..
T Consensus 254 v~~~~~-~~~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q 329 (385)
T TIGR00215 254 LHLIDG-DARKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQ 329 (385)
T ss_pred EEEECc-hHHHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcC
Confidence 333222 23358888888 9999999988 999999999999 7642 27789999999 88887766
Q ss_pred cCCCcccCHHHHHHHHHHHHcCC----hhhHHHHHHHHHHHHHHH
Q 046553 162 DKSGLVIKREKVKEAIEKLMDRG----KQGEKRRKRTRQLGEIAN 202 (232)
Q Consensus 162 ~~~~~~~~~~~l~~~i~~vl~d~----~~~~~~~~~a~~l~~~~~ 202 (232)
++ ++++.|.+.+.++|.|+ +..+++++...++..++.
T Consensus 330 ~~----~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~ 370 (385)
T TIGR00215 330 EE----CTPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQRIY 370 (385)
T ss_pred CC----CCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHhc
Confidence 65 89999999999999999 888899999888888874
No 41
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.98 E-value=1.2e-08 Score=90.75 Aligned_cols=162 Identities=15% Similarity=0.047 Sum_probs=95.0
Q ss_pred hHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHh---h--CCCcEEEEEcCCCCCccchhhhhhhhHHHHhcC---
Q 046553 22 QCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLE---A--SSQPFIWVIRGGERSQGLEKWIQEEGLEERAKG--- 93 (232)
Q Consensus 22 ~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~---~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~--- 93 (232)
.+...+...+++++|++..||...........+++++. + .+.+++|..+... ..+.+.+....
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~ 245 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK---------RREQIEEALAEYAG 245 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh---------hHHHHHHHHhhcCC
Confidence 34444444445667777778766432222333444332 2 2456777654222 11222222211
Q ss_pred CCeEEecccch-hhhhcccCcceEEecCCchhHHHHHHhCCCeeeccccc--------chhHH-----HHHHHh-hhhhc
Q 046553 94 RGFIIRGWAPQ-VLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFA--------EQFYN-----DKLAVQ-AAVTW 158 (232)
Q Consensus 94 ~nv~v~~~~pq-~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~--------DQ~~n-----A~~v~~-G~g~~ 158 (232)
-++.+. .+. ..++..+++ +|+.+|.+++ |++++|+|+|+.|... +|..| +..+.+ +++..
T Consensus 246 ~~v~~~--~~~~~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 320 (380)
T PRK00025 246 LEVTLL--DGQKREAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPE 320 (380)
T ss_pred CCeEEE--cccHHHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchh
Confidence 233332 233 368889998 9999999888 9999999999985421 22222 233333 33333
Q ss_pred ccccCCCcccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHH
Q 046553 159 GLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGEIA 201 (232)
Q Consensus 159 ~~~~~~~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~ 201 (232)
+.... .+++.+.+.+.++++|++..++|+++++++...+
T Consensus 321 ~~~~~----~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~ 359 (380)
T PRK00025 321 LLQEE----ATPEKLARALLPLLADGARRQALLEGFTELHQQL 359 (380)
T ss_pred hcCCC----CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Confidence 33332 6899999999999999977777777776665554
No 42
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.95 E-value=2.5e-08 Score=89.81 Aligned_cols=139 Identities=17% Similarity=0.066 Sum_probs=92.2
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHHHhh----CCCcEEEEEcCCCCCccchhhhhhhhHHH-Hh-------------c
Q 046553 31 EPWSVIYACLGSICGLATWQLLELGLGLEA----SSQPFIWVIRGGERSQGLEKWIQEEGLEE-RA-------------K 92 (232)
Q Consensus 31 ~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~----~~~~~i~~~~~~~~~~~~~~~~lp~~~~~-~~-------------~ 92 (232)
+++++|.+..||......+.+..+++++.. .+.+|++.+.+....+. +-..+.+ .. .
T Consensus 203 ~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~~-----~~~~l~~~g~~~~~~~~~~~~~~~ 277 (396)
T TIGR03492 203 TGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSLEK-----LQAILEDLGWQLEGSSEDQTSLFQ 277 (396)
T ss_pred CCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCHHH-----HHHHHHhcCceecCCccccchhhc
Confidence 356789999999987443444455555543 36788888743332111 1011110 00 0
Q ss_pred CCCeEEecccchh-hhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-----hhhhcccccCCCc
Q 046553 93 GRGFIIRGWAPQV-LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-----AAVTWGLEDKSGL 166 (232)
Q Consensus 93 ~~nv~v~~~~pq~-~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-----G~g~~~~~~~~~~ 166 (232)
..++.+..|..++ .++..+++ +|+.+|..| .|+++.|+|+|++|....|. |+..+++ |.++.+..
T Consensus 278 ~~~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~~----- 348 (396)
T TIGR03492 278 KGTLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLAS----- 348 (396)
T ss_pred cCceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecCC-----
Confidence 1235555555454 68889998 999999877 99999999999999888887 9987765 44444443
Q ss_pred ccCHHHHHHHHHHHHcCC
Q 046553 167 VIKREKVKEAIEKLMDRG 184 (232)
Q Consensus 167 ~~~~~~l~~~i~~vl~d~ 184 (232)
.+.+.+.+++.+++.|+
T Consensus 349 -~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 349 -KNPEQAAQVVRQLLADP 365 (396)
T ss_pred -CCHHHHHHHHHHHHcCH
Confidence 35689999999999987
No 43
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.68 E-value=1.4e-07 Score=72.55 Aligned_cols=116 Identities=17% Similarity=0.186 Sum_probs=80.0
Q ss_pred CcEEEEEeCCCCCCC-HH--HHHHHHHHHhhCCC-cEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEE--ecccchh-
Q 046553 33 WSVIYACLGSICGLA-TW--QLLELGLGLEASSQ-PFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFII--RGWAPQV- 105 (232)
Q Consensus 33 ~~vV~vs~GS~~~~~-~~--~~~~l~~~l~~~~~-~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v--~~~~pq~- 105 (232)
...+||+-||..... -. ....+.+.+.+.|+ +.++.+|..... .|+.........++.+ ..|-|..
T Consensus 3 ~~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~-------~~d~~~~~~k~~gl~id~y~f~psl~ 75 (170)
T KOG3349|consen 3 LMTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPF-------FGDPIDLIRKNGGLTIDGYDFSPSLT 75 (170)
T ss_pred ceEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccC-------CCCHHHhhcccCCeEEEEEecCccHH
Confidence 347999999988521 11 12346667777776 778888877432 2232222112333433 4567764
Q ss_pred hhhcccCcceEEecCCchhHHHHHHhCCCeeecc----cccchhHHHHHHHh-hhhh
Q 046553 106 LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRP----LFAEQFYNDKLAVQ-AAVT 157 (232)
Q Consensus 106 ~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P----~~~DQ~~nA~~v~~-G~g~ 157 (232)
+..+.+++ +|+|+|+||..|.+..|+|.|+++ +-.+|-.-|..+++ |-=.
T Consensus 76 e~I~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~ 130 (170)
T KOG3349|consen 76 EDIRSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLY 130 (170)
T ss_pred HHHhhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEE
Confidence 56777777 999999999999999999999998 45789999998888 6544
No 44
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.64 E-value=4.8e-07 Score=78.70 Aligned_cols=137 Identities=15% Similarity=0.137 Sum_probs=102.2
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHHHhh-CCCc--EEEEEcCCCCCccchhhhhhhhHHHHh-----cCCCeEEeccc
Q 046553 31 EPWSVIYACLGSICGLATWQLLELGLGLEA-SSQP--FIWVIRGGERSQGLEKWIQEEGLEERA-----KGRGFIIRGWA 102 (232)
Q Consensus 31 ~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~-~~~~--~i~~~~~~~~~~~~~~~~lp~~~~~~~-----~~~nv~v~~~~ 102 (232)
+++.-|+||-|.... ..+.+...+.+... .+.+ .++.+|+. +|+.-.++. +.+++.+..|-
T Consensus 217 pE~~~Ilvs~GGG~d-G~eLi~~~l~A~~~l~~l~~~~~ivtGP~----------MP~~~r~~l~~~A~~~p~i~I~~f~ 285 (400)
T COG4671 217 PEGFDILVSVGGGAD-GAELIETALAAAQLLAGLNHKWLIVTGPF----------MPEAQRQKLLASAPKRPHISIFEFR 285 (400)
T ss_pred CccceEEEecCCChh-hHHHHHHHHHHhhhCCCCCcceEEEeCCC----------CCHHHHHHHHHhcccCCCeEEEEhh
Confidence 345567777765543 24555555555433 3443 45555543 555433322 24899999998
Q ss_pred chh-hhhcccCcceEEecCCchhHHHHHHhCCCeeecccc---cchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHH
Q 046553 103 PQV-LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLF---AEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAI 177 (232)
Q Consensus 103 pq~-~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~---~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i 177 (232)
.+. .++..++. +|+-||.||+.|.+.+|+|.+++|.. -+|-.-|.++++ |+.-.+.+++ +++..+.++|
T Consensus 286 ~~~~~ll~gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~----lt~~~La~al 359 (400)
T COG4671 286 NDFESLLAGARL--VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPEN----LTPQNLADAL 359 (400)
T ss_pred hhHHHHHHhhhe--eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCccc----CChHHHHHHH
Confidence 876 58888888 99999999999999999999999985 389999999999 9998888876 9999999999
Q ss_pred HHHHcCC
Q 046553 178 EKLMDRG 184 (232)
Q Consensus 178 ~~vl~d~ 184 (232)
...+..|
T Consensus 360 ~~~l~~P 366 (400)
T COG4671 360 KAALARP 366 (400)
T ss_pred HhcccCC
Confidence 9998843
No 45
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.52 E-value=6.2e-06 Score=71.24 Aligned_cols=142 Identities=16% Similarity=0.140 Sum_probs=94.3
Q ss_pred CcEEEEEeCCCCCC-CHHHHHHHHHHHhh-CCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchh---hh
Q 046553 33 WSVIYACLGSICGL-ATWQLLELGLGLEA-SSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQV---LL 107 (232)
Q Consensus 33 ~~vV~vs~GS~~~~-~~~~~~~l~~~l~~-~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~---~l 107 (232)
++.+++..|+.... ..+.+.+++..+.. .+.++++.-.+... +.+. ....++.+.+|+|+. .+
T Consensus 196 ~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~~----------~~~~--~~~~~v~~~g~~~~~~~~~~ 263 (364)
T cd03814 196 DRPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPAR----------ARLE--ARYPNVHFLGFLDGEELAAA 263 (364)
T ss_pred CCeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCchH----------HHHh--ccCCcEEEEeccCHHHHHHH
Confidence 34566777776642 23444444444433 24555544432211 1121 235789999998865 47
Q ss_pred hcccCcceEEecCC----chhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHHHc
Q 046553 108 LSHRAIGGFLTHCG----WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKLMD 182 (232)
Q Consensus 108 L~~~~~~~~I~hgG----~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~vl~ 182 (232)
+..+++ +|+.+. .+++.||+++|+|+|+.|..+ +...++. +.|..... -+.+++..+|.+++.
T Consensus 264 ~~~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~~~~g~~~~~------~~~~~l~~~i~~l~~ 331 (364)
T cd03814 264 YASADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTDGENGLLVEP------GDAEAFAAALAALLA 331 (364)
T ss_pred HHhCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcCCcceEEcCC------CCHHHHHHHHHHHHc
Confidence 888888 776654 478999999999999987653 5556677 88877665 467889999999999
Q ss_pred CChhhHHHHHHHHHHH
Q 046553 183 RGKQGEKRRKRTRQLG 198 (232)
Q Consensus 183 d~~~~~~~~~~a~~l~ 198 (232)
|++..+++.+++.+..
T Consensus 332 ~~~~~~~~~~~~~~~~ 347 (364)
T cd03814 332 DPELRRRMAARARAEA 347 (364)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9877777777766655
No 46
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.44 E-value=3.2e-06 Score=73.36 Aligned_cols=146 Identities=18% Similarity=0.096 Sum_probs=94.6
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHHHhhCC-CcEEEEEcCCCCCccchhhhhhhhHHHH----hcCCCeEEecccchh---
Q 046553 34 SVIYACLGSICGLATWQLLELGLGLEASS-QPFIWVIRGGERSQGLEKWIQEEGLEER----AKGRGFIIRGWAPQV--- 105 (232)
Q Consensus 34 ~vV~vs~GS~~~~~~~~~~~l~~~l~~~~-~~~i~~~~~~~~~~~~~~~~lp~~~~~~----~~~~nv~v~~~~pq~--- 105 (232)
+.+++..|+... .+....+++++.+.. .++++...+.. ...+.+. ...+|+.+.+|+|+.
T Consensus 191 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~l~i~G~g~~----------~~~~~~~~~~~~~~~~V~~~g~v~~~~~~ 258 (357)
T cd03795 191 RPFFLFVGRLVY--YKGLDVLLEAAAALPDAPLVIVGEGPL----------EAELEALAAALGLLDRVRFLGRLDDEEKA 258 (357)
T ss_pred CcEEEEeccccc--ccCHHHHHHHHHhccCcEEEEEeCChh----------HHHHHHHHHhcCCcceEEEcCCCCHHHHH
Confidence 355567777654 334555666666655 55555443321 1222221 135789999999974
Q ss_pred hhhcccCcceEEec---CC-chhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHH
Q 046553 106 LLLSHRAIGGFLTH---CG-WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKL 180 (232)
Q Consensus 106 ~lL~~~~~~~~I~h---gG-~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~v 180 (232)
.++..+++.++.++ -| ..++.||+++|+|+|+.+..+....... . +.|...+. -+.+++.++|.++
T Consensus 259 ~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~~~g~~~~~------~d~~~~~~~i~~l 329 (357)
T cd03795 259 ALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---HGVTGLVVPP------GDPAALAEAIRRL 329 (357)
T ss_pred HHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---CCCceEEeCC------CCHHHHHHHHHHH
Confidence 47778888433332 23 3479999999999999876554433222 3 55655554 3689999999999
Q ss_pred HcCChhhHHHHHHHHHHHHH
Q 046553 181 MDRGKQGEKRRKRTRQLGEI 200 (232)
Q Consensus 181 l~d~~~~~~~~~~a~~l~~~ 200 (232)
++|++..+++++++.+....
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~ 349 (357)
T cd03795 330 LEDPELRERLGEAARERAEE 349 (357)
T ss_pred HHCHHHHHHHHHHHHHHHHH
Confidence 99998888888888776554
No 47
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=98.34 E-value=7.1e-06 Score=64.47 Aligned_cols=148 Identities=20% Similarity=0.179 Sum_probs=90.7
Q ss_pred CCcEEEEEeCCCCCC-CHHHHHHHHHHHhh--CCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccc--hh-
Q 046553 32 PWSVIYACLGSICGL-ATWQLLELGLGLEA--SSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAP--QV- 105 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~-~~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~p--q~- 105 (232)
+++.+++..|+.... ..+.+..++..+.. .+.-.++.+|..... .. +-..........++.+.++.+ +.
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~----~~-~~~~~~~~~~~~~i~~~~~~~~~~l~ 87 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYK----KE-LKNLIEKLNLKENIIFLGYVPDDELD 87 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHH----HH-HHHHHHHTTCGTTEEEEESHSHHHHH
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccccc----cc-cccccccccccccccccccccccccc
Confidence 456667778887763 23334333333321 222334455522110 00 111111111246888888888 33
Q ss_pred hhhcccCcceEEec----CCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHH
Q 046553 106 LLLSHRAIGGFLTH----CGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKL 180 (232)
Q Consensus 106 ~lL~~~~~~~~I~h----gG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~v 180 (232)
.++..+++ +|+. +...++.||+++|+|+|+.. ...+...+.. .-|...+. -+.+++.++|.++
T Consensus 88 ~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~~~~~~g~~~~~------~~~~~l~~~i~~~ 155 (172)
T PF00534_consen 88 ELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEIINDGVNGFLFDP------NDIEELADAIEKL 155 (172)
T ss_dssp HHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHSGTTTSEEEEST------TSHHHHHHHHHHH
T ss_pred ccccccee--ccccccccccccccccccccccceeecc----ccCCceeeccccceEEeCC------CCHHHHHHHHHHH
Confidence 57888887 7766 56779999999999999854 4555666666 65776665 4799999999999
Q ss_pred HcCChhhHHHHHHHHH
Q 046553 181 MDRGKQGEKRRKRTRQ 196 (232)
Q Consensus 181 l~d~~~~~~~~~~a~~ 196 (232)
+.|++..+.+.+++++
T Consensus 156 l~~~~~~~~l~~~~~~ 171 (172)
T PF00534_consen 156 LNDPELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HCCHHHHHHHHHHhcC
Confidence 9988777777777765
No 48
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.32 E-value=1.8e-05 Score=68.24 Aligned_cols=146 Identities=18% Similarity=0.139 Sum_probs=93.4
Q ss_pred CcEEEEEeCCCCCC-CHHHHHHHHHHHhh--CCCcEEEEEcCCCCCccchhhhhhhhHHHH---h-cCCCeEEecccchh
Q 046553 33 WSVIYACLGSICGL-ATWQLLELGLGLEA--SSQPFIWVIRGGERSQGLEKWIQEEGLEER---A-KGRGFIIRGWAPQV 105 (232)
Q Consensus 33 ~~vV~vs~GS~~~~-~~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~---~-~~~nv~v~~~~pq~ 105 (232)
++.+++..|+.... ..+.+..++..+.. .+.++++..++... +.+.+. . ...++.+.+++|+.
T Consensus 201 ~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~~~----------~~~~~~~~~~~~~~~v~~~g~~~~~ 270 (374)
T cd03817 201 DEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPER----------EELEELARELGLADRVIFTGFVPRE 270 (374)
T ss_pred CCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCchH----------HHHHHHHHHcCCCCcEEEeccCChH
Confidence 34555667776643 23444444444433 34565555433211 222221 1 25788999999865
Q ss_pred ---hhhcccCcceEEecC----CchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHH
Q 046553 106 ---LLLSHRAIGGFLTHC----GWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAI 177 (232)
Q Consensus 106 ---~lL~~~~~~~~I~hg----G~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i 177 (232)
.++..+++ +|... ...++.||+++|+|+|+.+.. ..+..+.+ +.|.....++ . ++.+++
T Consensus 271 ~~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i~~~~~g~~~~~~~------~-~~~~~i 337 (374)
T cd03817 271 ELPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLVADGENGFLFPPGD------E-ALAEAL 337 (374)
T ss_pred HHHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCCC----ChhhheecCceeEEeCCCC------H-HHHHHH
Confidence 47888888 66433 346899999999999997643 34556666 6777666542 2 899999
Q ss_pred HHHHcCChhhHHHHHHHHHHHHHH
Q 046553 178 EKLMDRGKQGEKRRKRTRQLGEIA 201 (232)
Q Consensus 178 ~~vl~d~~~~~~~~~~a~~l~~~~ 201 (232)
.++++|++..+.+.+++++.....
T Consensus 338 ~~l~~~~~~~~~~~~~~~~~~~~~ 361 (374)
T cd03817 338 LRLLQDPELRRRLSKNAEESAEKF 361 (374)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHH
Confidence 999999877777777777776654
No 49
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.30 E-value=5.5e-05 Score=69.41 Aligned_cols=142 Identities=17% Similarity=0.121 Sum_probs=92.8
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHhhC-CCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchh---hhhcc
Q 046553 35 VIYACLGSICGLATWQLLELGLGLEAS-SQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQV---LLLSH 110 (232)
Q Consensus 35 vV~vs~GS~~~~~~~~~~~l~~~l~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~---~lL~~ 110 (232)
.+++..|+... .+....+++++... +.+++++-.+. ..+.+.+.....++.+.+|+|+. .++..
T Consensus 264 ~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~ivG~G~----------~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~ 331 (465)
T PLN02871 264 PLIVYVGRLGA--EKNLDFLKRVMERLPGARLAFVGDGP----------YREELEKMFAGTPTVFTGMLQGDELSQAYAS 331 (465)
T ss_pred eEEEEeCCCch--hhhHHHHHHHHHhCCCcEEEEEeCCh----------HHHHHHHHhccCCeEEeccCCHHHHHHHHHH
Confidence 34456687764 33455566666554 45655443322 22344444445688899999754 48888
Q ss_pred cCcceEEecCC----chhHHHHHHhCCCeeecccccchhHHHHHHH---h-hhhhcccccCCCcccCHHHHHHHHHHHHc
Q 046553 111 RAIGGFLTHCG----WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAV---Q-AAVTWGLEDKSGLVIKREKVKEAIEKLMD 182 (232)
Q Consensus 111 ~~~~~~I~hgG----~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~---~-G~g~~~~~~~~~~~~~~~~l~~~i~~vl~ 182 (232)
+++ ||.-.. ..++.||+++|+|+|+....+ ....+. . +.|..... -+.+++.++|.++++
T Consensus 332 aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~~~G~lv~~------~d~~~la~~i~~ll~ 399 (465)
T PLN02871 332 GDV--FVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEGKTGFLYTP------GDVDDCVEKLETLLA 399 (465)
T ss_pred CCE--EEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCCCceEEeCC------CCHHHHHHHHHHHHh
Confidence 888 775443 346889999999999876532 122222 2 55666554 368899999999999
Q ss_pred CChhhHHHHHHHHHHHHH
Q 046553 183 RGKQGEKRRKRTRQLGEI 200 (232)
Q Consensus 183 d~~~~~~~~~~a~~l~~~ 200 (232)
|++..+++.+++++..+.
T Consensus 400 ~~~~~~~~~~~a~~~~~~ 417 (465)
T PLN02871 400 DPELRERMGAAAREEVEK 417 (465)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 987777888888775543
No 50
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.29 E-value=3.2e-05 Score=66.55 Aligned_cols=146 Identities=18% Similarity=0.064 Sum_probs=90.7
Q ss_pred CCcEEEEEeCCCCCCC-HHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchh---hh
Q 046553 32 PWSVIYACLGSICGLA-TWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQV---LL 107 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~-~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~---~l 107 (232)
+.+.+++..|+..... .+.+...+..+...+.++++.-...... ..........++.+.+|+|+. .+
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~---------~~~~~~~~~~~v~~~g~~~~~~~~~~ 259 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELE---------EESYELEGDPRVEFLGAYPQEEIDDF 259 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhh---------HHHHhhcCCCeEEEeCCCCHHHHHHH
Confidence 4456667778776532 3333333333333356655443332210 100000135788899999754 46
Q ss_pred hcccCcceEEec----C-CchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHHH
Q 046553 108 LSHRAIGGFLTH----C-GWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKLM 181 (232)
Q Consensus 108 L~~~~~~~~I~h----g-G~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~vl 181 (232)
+..+++ +|+. . ...++.||+++|+|+|+.+.. .....+.+ +.|..... -+.+++.+++.+++
T Consensus 260 ~~~ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~~~g~~~~~------~d~~~l~~~i~~l~ 327 (359)
T cd03823 260 YAEIDV--LVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRDGVNGLLFPP------GDAEDLAAALERLI 327 (359)
T ss_pred HHhCCE--EEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcCCCcEEEECC------CCHHHHHHHHHHHH
Confidence 888888 5532 2 344799999999999997653 35556666 56776665 35899999999999
Q ss_pred cCChhhHHHHHHHHHHH
Q 046553 182 DRGKQGEKRRKRTRQLG 198 (232)
Q Consensus 182 ~d~~~~~~~~~~a~~l~ 198 (232)
+|++..+++.+++++..
T Consensus 328 ~~~~~~~~~~~~~~~~~ 344 (359)
T cd03823 328 DDPDLLERLRAGIEPPR 344 (359)
T ss_pred hChHHHHHHHHhHHHhh
Confidence 99877777776665543
No 51
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.27 E-value=2.6e-05 Score=67.36 Aligned_cols=146 Identities=20% Similarity=0.126 Sum_probs=92.2
Q ss_pred CCcEEEEEeCCCCCCC-HHHHHHHHHHHhhC-CCcEEEEEcCCCCCccchhhhhhhhHHH---HhcCCCeEEecccchh-
Q 046553 32 PWSVIYACLGSICGLA-TWQLLELGLGLEAS-SQPFIWVIRGGERSQGLEKWIQEEGLEE---RAKGRGFIIRGWAPQV- 105 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~-~~~~~~l~~~l~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~---~~~~~nv~v~~~~pq~- 105 (232)
+.+.+++..|+..... .+.+...+..+.+. +.++++ +|..... +.+.+ ....+++.+.+++|+.
T Consensus 218 ~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~~~~~---------~~~~~~~~~~~~~~v~~~g~~~~~~ 287 (394)
T cd03794 218 DDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGDGPEK---------EELKELAKALGLDNVTFLGRVPKEE 287 (394)
T ss_pred CCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCCcccH---------HHHHHHHHHcCCCcEEEeCCCChHH
Confidence 3456677778776522 34444444444333 555544 4433211 22222 2345789999999754
Q ss_pred --hhhcccCcceEEecCC---------chhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHH
Q 046553 106 --LLLSHRAIGGFLTHCG---------WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKV 173 (232)
Q Consensus 106 --~lL~~~~~~~~I~hgG---------~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l 173 (232)
.++..+++ +|.... .+++.||+++|+|+|+.+..+.+. .+.. +.|..... -+.+++
T Consensus 288 ~~~~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~----~~~~~~~g~~~~~------~~~~~l 355 (394)
T cd03794 288 LPELLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAE----LVEEAGAGLVVPP------GDPEAL 355 (394)
T ss_pred HHHHHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchh----hhccCCcceEeCC------CCHHHH
Confidence 47888888 553322 334799999999999998754432 3333 55665554 368899
Q ss_pred HHHHHHHHcCChhhHHHHHHHHHHHH
Q 046553 174 KEAIEKLMDRGKQGEKRRKRTRQLGE 199 (232)
Q Consensus 174 ~~~i~~vl~d~~~~~~~~~~a~~l~~ 199 (232)
.++|.+++.|++..+++++++.+...
T Consensus 356 ~~~i~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T cd03794 356 AAAILELLDDPEERAEMGENGRRYVE 381 (394)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 99999999998777777777776655
No 52
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.25 E-value=4.1e-05 Score=65.41 Aligned_cols=148 Identities=16% Similarity=0.147 Sum_probs=92.1
Q ss_pred CCcEEEEEeCCCCCCC-HHHHHHHHHHHhh--CCCcEEEEEcCCCCCccchhhhhhhh-HHHHhcCCCeEEecccchh-h
Q 046553 32 PWSVIYACLGSICGLA-TWQLLELGLGLEA--SSQPFIWVIRGGERSQGLEKWIQEEG-LEERAKGRGFIIRGWAPQV-L 106 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~-~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~lp~~-~~~~~~~~nv~v~~~~pq~-~ 106 (232)
+.+.+++..|+..... .+.+.+.+..+.+ .+.++++........ . .... +.......++.+.++..+. .
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~-~-----~~~~~~~~~~~~~~v~~~g~~~~~~~ 259 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEEN-P-----AAILEIEKLGLEGRVEFLGFRDDVPE 259 (359)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcch-h-----hHHHHHHhcCCcceEEEeeccccHHH
Confidence 3456777788876532 4444444444443 345555444333211 0 0000 1111124678887775554 5
Q ss_pred hhcccCcceEEecCC----chhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHHH
Q 046553 107 LLSHRAIGGFLTHCG----WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKLM 181 (232)
Q Consensus 107 lL~~~~~~~~I~hgG----~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~vl 181 (232)
++..+++ +|.... .+++.||+++|+|+|+.+..+ ....+.+ +.|...+. -+.+++.++|.+++
T Consensus 260 ~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~~~~g~~~~~------~~~~~~~~~i~~l~ 327 (359)
T cd03808 260 LLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVIDGVNGFLVPP------GDAEALADAIERLI 327 (359)
T ss_pred HHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhcCcceEEECC------CCHHHHHHHHHHHH
Confidence 8888888 665433 678999999999999976543 3455665 66766654 35899999999999
Q ss_pred cCChhhHHHHHHHHHH
Q 046553 182 DRGKQGEKRRKRTRQL 197 (232)
Q Consensus 182 ~d~~~~~~~~~~a~~l 197 (232)
.|++..+.+.+++.+.
T Consensus 328 ~~~~~~~~~~~~~~~~ 343 (359)
T cd03808 328 EDPELRARMGQAARKR 343 (359)
T ss_pred hCHHHHHHHHHHHHHH
Confidence 9987777777776665
No 53
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.24 E-value=3e-05 Score=65.95 Aligned_cols=97 Identities=15% Similarity=0.167 Sum_probs=69.0
Q ss_pred CCCeEEecccchh-hhhcccCcceEEecCC----chhHHHHHHhCCCeeecccccchhHHHHHHHh-h-hhhcccccCCC
Q 046553 93 GRGFIIRGWAPQV-LLLSHRAIGGFLTHCG----WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-A-AVTWGLEDKSG 165 (232)
Q Consensus 93 ~~nv~v~~~~pq~-~lL~~~~~~~~I~hgG----~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G-~g~~~~~~~~~ 165 (232)
..++.+.++.... .++..+++ +|.... .+++.||+++|+|+|+.+..+.+. .+.. | .|...+.
T Consensus 234 ~~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~~~~~~~g~~~~~---- 303 (348)
T cd03820 234 EDRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EIIEDGVNGLLVPN---- 303 (348)
T ss_pred CCeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchH----hhhccCcceEEeCC----
Confidence 4567777764433 58888887 665542 568999999999999876544332 2334 4 6766654
Q ss_pred cccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHH
Q 046553 166 LVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGEIA 201 (232)
Q Consensus 166 ~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~ 201 (232)
-+.+++.++|.+++.|++..+.+.++++++.+.+
T Consensus 304 --~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~~ 337 (348)
T cd03820 304 --GDVEALAEALLRLMEDEELRKRMGANARESAERF 337 (348)
T ss_pred --CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHh
Confidence 3679999999999999977777887776655554
No 54
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=98.22 E-value=6.2e-05 Score=67.98 Aligned_cols=99 Identities=14% Similarity=0.168 Sum_probs=71.2
Q ss_pred CCCeEEecccchh---hhhcccCcceEEecCC----chhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCC
Q 046553 93 GRGFIIRGWAPQV---LLLSHRAIGGFLTHCG----WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKS 164 (232)
Q Consensus 93 ~~nv~v~~~~pq~---~lL~~~~~~~~I~hgG----~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~ 164 (232)
..++.+.+|+++. .++..+++.+|+...- ..++.||+++|+|+|+....+ ....+.+ ..|......
T Consensus 288 ~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg----~~e~i~~~~~G~l~~~~-- 361 (407)
T cd04946 288 NISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG----TPEIVDNGGNGLLLSKD-- 361 (407)
T ss_pred CceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC----cHHHhcCCCcEEEeCCC--
Confidence 4578889999975 3555444445776543 568999999999999865433 4556666 478766553
Q ss_pred CcccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHH
Q 046553 165 GLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGEI 200 (232)
Q Consensus 165 ~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~ 200 (232)
-+.+++.++|.++++|++..+.|++++++..+.
T Consensus 362 ---~~~~~la~~I~~ll~~~~~~~~m~~~ar~~~~~ 394 (407)
T cd04946 362 ---PTPNELVSSLSKFIDNEEEYQTMREKAREKWEE 394 (407)
T ss_pred ---CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 368999999999999887777777777665543
No 55
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.22 E-value=5.4e-05 Score=66.82 Aligned_cols=94 Identities=13% Similarity=0.113 Sum_probs=71.5
Q ss_pred CCCeEEecccchhh---hhcccCcceEEecC----CchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCC
Q 046553 93 GRGFIIRGWAPQVL---LLSHRAIGGFLTHC----GWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKS 164 (232)
Q Consensus 93 ~~nv~v~~~~pq~~---lL~~~~~~~~I~hg----G~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~ 164 (232)
..++.+.+|+|+.. ++..+++ +++.. -..++.||+++|+|+|+.+..+ ....+++ +.|...+.
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~~~~g~~~~~--- 352 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVDGVTGLLVDP--- 352 (398)
T ss_pred CceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccCCCCeEEeCC---
Confidence 46889999998754 6888887 66432 2468999999999999876433 5556667 77887665
Q ss_pred CcccCHHHHHHHHHHHHcCChhhHHHHHHHHHHH
Q 046553 165 GLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLG 198 (232)
Q Consensus 165 ~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~ 198 (232)
-+.+++.++|.+++.|++..+.+.+++++..
T Consensus 353 ---~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~ 383 (398)
T cd03800 353 ---RDPEALAAALRRLLTDPALRRRLSRAGLRRA 383 (398)
T ss_pred ---CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 3689999999999998877777777776654
No 56
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.22 E-value=2.5e-05 Score=68.39 Aligned_cols=94 Identities=18% Similarity=0.117 Sum_probs=70.5
Q ss_pred CCCeEEecccchh---hhhcccCcceEEec----------CCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhc
Q 046553 93 GRGFIIRGWAPQV---LLLSHRAIGGFLTH----------CGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTW 158 (232)
Q Consensus 93 ~~nv~v~~~~pq~---~lL~~~~~~~~I~h----------gG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~ 158 (232)
..++.+.+++|+. .++..+++ +|.. |-.+++.||+++|+|+|.-+..+ ++..+.+ +.|..
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~~~~g~~ 317 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVEDGETGLL 317 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheecCCeeEE
Confidence 4678888998864 46888888 5532 23578999999999999887643 5666666 77776
Q ss_pred ccccCCCcccCHHHHHHHHHHHHcCChhhHHHHHHHHHHH
Q 046553 159 GLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLG 198 (232)
Q Consensus 159 ~~~~~~~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~ 198 (232)
.+. -+.+++.++|.+++.|++..+++.+++.+..
T Consensus 318 ~~~------~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~ 351 (367)
T cd05844 318 VPE------GDVAALAAALGRLLADPDLRARMGAAGRRRV 351 (367)
T ss_pred ECC------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 665 3689999999999998866666777766554
No 57
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=98.18 E-value=0.00013 Score=66.02 Aligned_cols=96 Identities=17% Similarity=0.189 Sum_probs=70.5
Q ss_pred CCCeEEecccchh---hhhcccCcceEEec---------CCc-hhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhc
Q 046553 93 GRGFIIRGWAPQV---LLLSHRAIGGFLTH---------CGW-NSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTW 158 (232)
Q Consensus 93 ~~nv~v~~~~pq~---~lL~~~~~~~~I~h---------gG~-~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~ 158 (232)
.+++.+.+|+|+. .++..+++ ||.- -|. .++.||+++|+|+|+....+ ....+.+ ..|..
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~~~~G~l 351 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEADKSGWL 351 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcCCCceEE
Confidence 4678999999875 47888888 6542 233 57899999999999976533 3445555 56766
Q ss_pred ccccCCCcccCHHHHHHHHHHHHc-CChhhHHHHHHHHHHHHH
Q 046553 159 GLEDKSGLVIKREKVKEAIEKLMD-RGKQGEKRRKRTRQLGEI 200 (232)
Q Consensus 159 ~~~~~~~~~~~~~~l~~~i~~vl~-d~~~~~~~~~~a~~l~~~ 200 (232)
.+. -+.+++.++|.+++. |++..+.+.+++++..+.
T Consensus 352 v~~------~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~ 388 (406)
T PRK15427 352 VPE------NDAQALAQRLAAFSQLDTDELAPVVKRAREKVET 388 (406)
T ss_pred eCC------CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 655 368999999999999 887777777777665433
No 58
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.16 E-value=0.00015 Score=61.76 Aligned_cols=92 Identities=20% Similarity=0.195 Sum_probs=69.3
Q ss_pred cCCCeEEecccchh---hhhcccCcceEEe----cCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccC
Q 046553 92 KGRGFIIRGWAPQV---LLLSHRAIGGFLT----HCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDK 163 (232)
Q Consensus 92 ~~~nv~v~~~~pq~---~lL~~~~~~~~I~----hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~ 163 (232)
...++.+.+++++. .++..+++ +|+ -+..+++.||+++|+|+|+.+. ......+.+ +.|...+.
T Consensus 254 ~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~~~g~~~~~-- 325 (374)
T cd03801 254 LGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVEDGETGLLVPP-- 325 (374)
T ss_pred CCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcCCcceEEeCC--
Confidence 36788899999643 47888887 553 2456789999999999999775 345666666 67776655
Q ss_pred CCcccCHHHHHHHHHHHHcCChhhHHHHHHHH
Q 046553 164 SGLVIKREKVKEAIEKLMDRGKQGEKRRKRTR 195 (232)
Q Consensus 164 ~~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~ 195 (232)
.+.+++.++|.+++.|++..+++.++++
T Consensus 326 ----~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 353 (374)
T cd03801 326 ----GDPEALAEAILRLLDDPELRRRLGEAAR 353 (374)
T ss_pred ----CCHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 3589999999999999866666666665
No 59
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.13 E-value=6.4e-05 Score=65.13 Aligned_cols=148 Identities=18% Similarity=0.094 Sum_probs=90.0
Q ss_pred CcEEEEEeCCCCCC-CHHHHHHHHHHHhhC--CCcEEEEEcCCCCCccchhhhhhhhHHHHh-cCCCeEEecccchh---
Q 046553 33 WSVIYACLGSICGL-ATWQLLELGLGLEAS--SQPFIWVIRGGERSQGLEKWIQEEGLEERA-KGRGFIIRGWAPQV--- 105 (232)
Q Consensus 33 ~~vV~vs~GS~~~~-~~~~~~~l~~~l~~~--~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq~--- 105 (232)
.+++++.+|+.... ..+.+...+..+... +.++++.-.+... .. + ..+.+.. ..+++.+.+++|+.
T Consensus 178 ~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~-~~-----~-~~~~~~~~~~~~v~~~g~~~~~~l~ 250 (355)
T cd03799 178 EPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPLR-DE-----L-EALIAELGLEDRVTLLGAKSQEEVR 250 (355)
T ss_pred CCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCccH-HH-----H-HHHHHHcCCCCeEEECCcCChHHHH
Confidence 44566677776542 234444444444332 4455544333221 00 1 1111222 25789999999753
Q ss_pred hhhcccCcceEEe--c--------CCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHH
Q 046553 106 LLLSHRAIGGFLT--H--------CGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVK 174 (232)
Q Consensus 106 ~lL~~~~~~~~I~--h--------gG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~ 174 (232)
.++..+++ ++. . |..+++.||+++|+|+|+.+... ....+.. ..|..... -+.+++.
T Consensus 251 ~~~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~~~~g~~~~~------~~~~~l~ 318 (355)
T cd03799 251 ELLRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVEDGETGLLVPP------GDPEALA 318 (355)
T ss_pred HHHHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhCCCceEEeCC------CCHHHHH
Confidence 47778887 555 2 33578999999999999976532 2234444 46766654 3689999
Q ss_pred HHHHHHHcCChhhHHHHHHHHHHHH
Q 046553 175 EAIEKLMDRGKQGEKRRKRTRQLGE 199 (232)
Q Consensus 175 ~~i~~vl~d~~~~~~~~~~a~~l~~ 199 (232)
++|.++++|++...++.+++++..+
T Consensus 319 ~~i~~~~~~~~~~~~~~~~a~~~~~ 343 (355)
T cd03799 319 DAIERLLDDPELRREMGEAGRARVE 343 (355)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 9999999998666677777765443
No 60
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.13 E-value=4.5e-05 Score=67.12 Aligned_cols=131 Identities=21% Similarity=0.149 Sum_probs=82.4
Q ss_pred CCcEEEEEeCCCCCC-CHHHHHHHHHHHhhCCC-cEEEEEcCCCCCccchhhhhhhhHHH---Hhc--CCCeEEecccch
Q 046553 32 PWSVIYACLGSICGL-ATWQLLELGLGLEASSQ-PFIWVIRGGERSQGLEKWIQEEGLEE---RAK--GRGFIIRGWAPQ 104 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~-~~~~~~~l~~~l~~~~~-~~i~~~~~~~~~~~~~~~~lp~~~~~---~~~--~~nv~v~~~~pq 104 (232)
+++.|++++|..... ..+.+..+++++..... ++.+....... ..+.+.+ ... .+++.+.++.+.
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~--------~~~~l~~~~~~~~~~~~~v~~~~~~~~ 268 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR--------TRPRIREAGLEFLGHHPNVLLISPLGY 268 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC--------hHHHHHHHHHhhccCCCCEEEECCcCH
Confidence 456778888876643 35567777777765432 24433332221 1122222 121 467777765543
Q ss_pred h---hhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHH
Q 046553 105 V---LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKL 180 (232)
Q Consensus 105 ~---~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~v 180 (232)
. .++..+++ ||+..| +.+.|+++.|+|+|.++.. |. +..+.+ |+++.... +.+++.+++.++
T Consensus 269 ~~~~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~g~~~~~~~-------~~~~i~~~i~~l 334 (363)
T cd03786 269 LYFLLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVESGTNVLVGT-------DPEAILAAIEKL 334 (363)
T ss_pred HHHHHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhheeeEEecCC-------CHHHHHHHHHHH
Confidence 3 45767888 999998 7777999999999998743 22 334455 77654431 478899999999
Q ss_pred HcCC
Q 046553 181 MDRG 184 (232)
Q Consensus 181 l~d~ 184 (232)
++|+
T Consensus 335 l~~~ 338 (363)
T cd03786 335 LSDE 338 (363)
T ss_pred hcCc
Confidence 9986
No 61
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.12 E-value=0.00018 Score=63.00 Aligned_cols=94 Identities=18% Similarity=0.099 Sum_probs=70.0
Q ss_pred CCCeEEecccchh-hhhcccCcceEEec----CCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCc
Q 046553 93 GRGFIIRGWAPQV-LLLSHRAIGGFLTH----CGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGL 166 (232)
Q Consensus 93 ~~nv~v~~~~pq~-~lL~~~~~~~~I~h----gG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~ 166 (232)
..++.+.++.++. .++..+++ +|.- +...++.||+++|+|+|+.+.. ..+..+.+ ..|...+.
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i~~~~~G~~~~~----- 320 (371)
T cd04962 252 QDDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVVKHGETGFLVDV----- 320 (371)
T ss_pred CceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCCC----CchhhhcCCCceEEcCC-----
Confidence 3568888887765 58888888 5532 3356999999999999997543 35566666 56766554
Q ss_pred ccCHHHHHHHHHHHHcCChhhHHHHHHHHHHH
Q 046553 167 VIKREKVKEAIEKLMDRGKQGEKRRKRTRQLG 198 (232)
Q Consensus 167 ~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~ 198 (232)
-+.+++.+++.+++.|++..+++++++++..
T Consensus 321 -~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 351 (371)
T cd04962 321 -GDVEAMAEYALSLLEDDELWQEFSRAARNRA 351 (371)
T ss_pred -CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 3688999999999998877777888877763
No 62
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=98.12 E-value=6.2e-05 Score=63.97 Aligned_cols=142 Identities=18% Similarity=0.109 Sum_probs=102.5
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHh-cCCCeEEecccchh-hhhcc
Q 046553 33 WSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERA-KGRGFIIRGWAPQV-LLLSH 110 (232)
Q Consensus 33 ~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq~-~lL~~ 110 (232)
+.-|+|++|-.- ......+++..+.+.++.+-++++...+. + ..+..+. ..+++.+......+ .++..
T Consensus 158 ~r~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~~p~-------l-~~l~k~~~~~~~i~~~~~~~dma~LMke 227 (318)
T COG3980 158 KRDILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSSNPT-------L-KNLRKRAEKYPNINLYIDTNDMAELMKE 227 (318)
T ss_pred hheEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCCCcc-------h-hHHHHHHhhCCCeeeEecchhHHHHHHh
Confidence 445788887654 24456778888888777766777744332 2 3333333 35777776666656 47788
Q ss_pred cCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHHHcCChhhHH
Q 046553 111 RAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEK 189 (232)
Q Consensus 111 ~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d~~~~~~ 189 (232)
|+. .|+-+|. |+.|++..|+|.+++|+.-.|.--|+.++. |+...+.-. ++.+.....+.++..|. .
T Consensus 228 ~d~--aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~-----l~~~~~~~~~~~i~~d~----~ 295 (318)
T COG3980 228 ADL--AISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYH-----LKDLAKDYEILQIQKDY----A 295 (318)
T ss_pred cch--heeccch-HHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCC-----CchHHHHHHHHHhhhCH----H
Confidence 888 8887765 899999999999999999999999999999 988866532 56777788888888887 5
Q ss_pred HHHHHHH
Q 046553 190 RRKRTRQ 196 (232)
Q Consensus 190 ~~~~a~~ 196 (232)
.|++.-.
T Consensus 296 ~rk~l~~ 302 (318)
T COG3980 296 RRKNLSF 302 (318)
T ss_pred Hhhhhhh
Confidence 5555433
No 63
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.11 E-value=3.4e-05 Score=67.60 Aligned_cols=136 Identities=13% Similarity=0.100 Sum_probs=88.1
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchh---hhhcccCc
Q 046553 37 YACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQV---LLLSHRAI 113 (232)
Q Consensus 37 ~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~---~lL~~~~~ 113 (232)
++..|.... .+....+++++...+.++++.-.+.. .+.+.+ ...+|+.+.+++|+. .++..+++
T Consensus 198 il~~G~~~~--~K~~~~li~a~~~~~~~l~ivG~g~~----------~~~l~~-~~~~~V~~~g~~~~~~~~~~~~~ad~ 264 (351)
T cd03804 198 YLSVGRLVP--YKRIDLAIEAFNKLGKRLVVIGDGPE----------LDRLRA-KAGPNVTFLGRVSDEELRDLYARARA 264 (351)
T ss_pred EEEEEcCcc--ccChHHHHHHHHHCCCcEEEEECChh----------HHHHHh-hcCCCEEEecCCCHHHHHHHHHhCCE
Confidence 445666664 34456677777777777665544321 122222 346899999999974 57888888
Q ss_pred ceEEecCCc-hhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHHHcCC-hhhHHH
Q 046553 114 GGFLTHCGW-NSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKLMDRG-KQGEKR 190 (232)
Q Consensus 114 ~~~I~hgG~-~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d~-~~~~~~ 190 (232)
-++-++-|. .++.||+++|+|+|+....+ ....+.+ ..|..... -+.+++.++|.++++|+ ...+.+
T Consensus 265 ~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~~~G~~~~~------~~~~~la~~i~~l~~~~~~~~~~~ 334 (351)
T cd03804 265 FLFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVIDGVTGILFEE------QTVESLAAAVERFEKNEDFDPQAI 334 (351)
T ss_pred EEECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeCCCCEEEeCC------CCHHHHHHHHHHHHhCcccCHHHH
Confidence 333333333 46789999999999986533 3344555 67776665 36888999999999987 344445
Q ss_pred HHHHH
Q 046553 191 RKRTR 195 (232)
Q Consensus 191 ~~~a~ 195 (232)
+++++
T Consensus 335 ~~~~~ 339 (351)
T cd03804 335 RAHAE 339 (351)
T ss_pred HHHHH
Confidence 54443
No 64
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.09 E-value=5.5e-05 Score=67.03 Aligned_cols=144 Identities=18% Similarity=0.099 Sum_probs=90.2
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHHHhhCC--CcEEEEEcCCCCCccchhhhhhhhHHHHhcC-CCeEEecccchhhhhc
Q 046553 33 WSVIYACLGSICGLATWQLLELGLGLEASS--QPFIWVIRGGERSQGLEKWIQEEGLEERAKG-RGFIIRGWAPQVLLLS 109 (232)
Q Consensus 33 ~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~--~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~-~nv~v~~~~pq~~lL~ 109 (232)
.++|.+.-||....-...+..++++..... ....+..+... . +.+.+.... ..+.+.+ +-..++.
T Consensus 167 ~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~---------~-~~i~~~~~~~~~~~~~~--~~~~~m~ 234 (347)
T PRK14089 167 EGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK---------G-KDLKEIYGDISEFEISY--DTHKALL 234 (347)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc---------H-HHHHHHHhcCCCcEEec--cHHHHHH
Confidence 479999999998744455554445443322 12222322221 1 122221211 2233322 3346888
Q ss_pred ccCcceEEecCCchhHHHHHHhCCCeeeccc--ccchhHHHHHHHh----hhhhcc-------------cccCCCcccCH
Q 046553 110 HRAIGGFLTHCGWNSTLEGVSAGVPLVTRPL--FAEQFYNDKLAVQ----AAVTWG-------------LEDKSGLVIKR 170 (232)
Q Consensus 110 ~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~--~~DQ~~nA~~v~~----G~g~~~-------------~~~~~~~~~~~ 170 (232)
.+++ +|+.+|..|+ |++.+|+|+|+ |+ ..-|..||+++.+ |+.-.+ ..++ .++
T Consensus 235 ~aDl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~----~t~ 306 (347)
T PRK14089 235 EAEF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEF----VTV 306 (347)
T ss_pred hhhH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhccc----CCH
Confidence 9998 9999999999 99999999999 44 4578999999994 777655 2233 888
Q ss_pred HHHHHHHHHHHcCChhhHHHHHHHHHHHHHH
Q 046553 171 EKVKEAIEKLMDRGKQGEKRRKRTRQLGEIA 201 (232)
Q Consensus 171 ~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~ 201 (232)
+.|.+.+.+. . .+++++...++.+.+
T Consensus 307 ~~la~~i~~~-~----~~~~~~~~~~l~~~l 332 (347)
T PRK14089 307 ENLLKAYKEM-D----REKFFKKSKELREYL 332 (347)
T ss_pred HHHHHHHHHH-H----HHHHHHHHHHHHHHh
Confidence 9998888772 1 235666666666655
No 65
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=98.08 E-value=4.8e-05 Score=67.08 Aligned_cols=100 Identities=14% Similarity=0.097 Sum_probs=73.8
Q ss_pred CCCeEEecccchh-hhhcccCcceEEecC--CchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCccc
Q 046553 93 GRGFIIRGWAPQV-LLLSHRAIGGFLTHC--GWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVI 168 (232)
Q Consensus 93 ~~nv~v~~~~pq~-~lL~~~~~~~~I~hg--G~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~ 168 (232)
..++.+.++.++. .++..+++-++.++. ...++.||+++|+|+|+..... .....+.. ..|..++. -
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~~~G~lv~~------~ 330 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDGENGYLVPK------G 330 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccCCCceEeCC------C
Confidence 4567777777665 588888885555553 3568999999999999965421 13345555 67776665 3
Q ss_pred CHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHH
Q 046553 169 KREKVKEAIEKLMDRGKQGEKRRKRTRQLGEIA 201 (232)
Q Consensus 169 ~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~ 201 (232)
+.+++.++|..++.|++..+.+.+++.+.++.+
T Consensus 331 d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~ 363 (372)
T cd04949 331 DIEALAEAIIELLNDPKLLQKFSEAAYENAERY 363 (372)
T ss_pred cHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHh
Confidence 689999999999999878888888888776554
No 66
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.05 E-value=0.00058 Score=58.44 Aligned_cols=82 Identities=16% Similarity=0.109 Sum_probs=61.5
Q ss_pred CCCeEEecccchh---hhhcccCcceEEe----cCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCC
Q 046553 93 GRGFIIRGWAPQV---LLLSHRAIGGFLT----HCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKS 164 (232)
Q Consensus 93 ~~nv~v~~~~pq~---~lL~~~~~~~~I~----hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~ 164 (232)
..++.+.+++|+. .++..+++ +|. -+..+++.||+++|+|+|+.+..+ ....+.. +.|.....
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~~~~~~g~~~~~--- 328 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAADV--FVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEIITDGENGLLVPP--- 328 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhcCe--eecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHhcCCcceeEECC---
Confidence 5788999999864 57778887 552 245678999999999999876533 4455666 56666655
Q ss_pred CcccCHHHHHHHHHHHHcCChh
Q 046553 165 GLVIKREKVKEAIEKLMDRGKQ 186 (232)
Q Consensus 165 ~~~~~~~~l~~~i~~vl~d~~~ 186 (232)
-+.+++.+++.+++++++.
T Consensus 329 ---~~~~~l~~~i~~~~~~~~~ 347 (377)
T cd03798 329 ---GDPEALAEAILRLLADPWL 347 (377)
T ss_pred ---CCHHHHHHHHHHHhcCcHH
Confidence 4689999999999998744
No 67
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=98.02 E-value=0.00035 Score=62.48 Aligned_cols=92 Identities=11% Similarity=0.168 Sum_probs=63.6
Q ss_pred CCCeEEecccchh---hhhcccCcceEEecC----C-chhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccC
Q 046553 93 GRGFIIRGWAPQV---LLLSHRAIGGFLTHC----G-WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDK 163 (232)
Q Consensus 93 ~~nv~v~~~~pq~---~lL~~~~~~~~I~hg----G-~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~ 163 (232)
+.++.+.+++|+. .++..+++ +|... | ..++.||+++|+|+|+....+ +...+.+ ..|..+...
T Consensus 256 ~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv~~~~~G~~l~~~- 328 (380)
T PRK15484 256 GDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFVLEGITGYHLAEP- 328 (380)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhcccCCceEEEeCC-
Confidence 4678888998853 46888888 66433 3 257889999999999986532 4455556 566544322
Q ss_pred CCcccCHHHHHHHHHHHHcCChhhHHHHHHHHH
Q 046553 164 SGLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQ 196 (232)
Q Consensus 164 ~~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~ 196 (232)
.+.+++.++|.++++|++. .++.+++++
T Consensus 329 ----~d~~~la~~I~~ll~d~~~-~~~~~~ar~ 356 (380)
T PRK15484 329 ----MTSDSIISDINRTLADPEL-TQIAEQAKD 356 (380)
T ss_pred ----CCHHHHHHHHHHHHcCHHH-HHHHHHHHH
Confidence 4789999999999998743 344555444
No 68
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.02 E-value=0.00012 Score=64.98 Aligned_cols=129 Identities=14% Similarity=0.078 Sum_probs=77.4
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHHHhhC-----CCcEEEEEcCCCCCccchhhhhhhhHHHHh-cCCCeEEecccchh-
Q 046553 33 WSVIYACLGSICGLATWQLLELGLGLEAS-----SQPFIWVIRGGERSQGLEKWIQEEGLEERA-KGRGFIIRGWAPQV- 105 (232)
Q Consensus 33 ~~vV~vs~GS~~~~~~~~~~~l~~~l~~~-----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq~- 105 (232)
+++|+++++-.... .+.+..+++++... +.++++...+... ....+.+.. ..+++.+.+.++..
T Consensus 197 ~~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~ 267 (365)
T TIGR00236 197 KRYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLNPV--------VREPLHKHLGDSKRVHLIEPLEYLD 267 (365)
T ss_pred CCEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCChH--------HHHHHHHHhCCCCCEEEECCCChHH
Confidence 35666654332211 13355566665442 4566665433211 112222222 23578887766643
Q ss_pred --hhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHHHc
Q 046553 106 --LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKLMD 182 (232)
Q Consensus 106 --~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~vl~ 182 (232)
.++..+++ +|+..|.. +.||+++|+|+|.++..++++. +.. |.+.... .+++++.+++.+++.
T Consensus 268 ~~~~l~~ad~--vv~~Sg~~-~~EA~a~g~PvI~~~~~~~~~e----~~~~g~~~lv~-------~d~~~i~~ai~~ll~ 333 (365)
T TIGR00236 268 FLNLAANSHL--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPE----TVEAGTNKLVG-------TDKENITKAAKRLLT 333 (365)
T ss_pred HHHHHHhCCE--EEECChhH-HHHHHHcCCCEEECCCCCCChH----HHhcCceEEeC-------CCHHHHHHHHHHHHh
Confidence 56677777 88877644 7999999999999976554442 233 6555442 368899999999998
Q ss_pred CC
Q 046553 183 RG 184 (232)
Q Consensus 183 d~ 184 (232)
|+
T Consensus 334 ~~ 335 (365)
T TIGR00236 334 DP 335 (365)
T ss_pred Ch
Confidence 87
No 69
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.00 E-value=0.00036 Score=60.30 Aligned_cols=97 Identities=14% Similarity=0.151 Sum_probs=68.1
Q ss_pred CCCeEEec-ccchh---hhhcccCcceEEec----CCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccC
Q 046553 93 GRGFIIRG-WAPQV---LLLSHRAIGGFLTH----CGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDK 163 (232)
Q Consensus 93 ~~nv~v~~-~~pq~---~lL~~~~~~~~I~h----gG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~ 163 (232)
..++.+.+ |+|+. .++..+++-++-++ +-.+++.||+++|+|+|..+..+ ...+.. +.|.....
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~~~g~~~~~-- 318 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDGGTGLLVPP-- 318 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeCCCcEEEcC--
Confidence 46777765 47753 57888887222222 33568999999999999987654 333455 66766555
Q ss_pred CCcccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHH
Q 046553 164 SGLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGEI 200 (232)
Q Consensus 164 ~~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~ 200 (232)
-+.+++.+++.++++|++..+++.+++++..+.
T Consensus 319 ----~d~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 351 (366)
T cd03822 319 ----GDPAALAEAIRRLLADPELAQALRARAREYARA 351 (366)
T ss_pred ----CCHHHHHHHHHHHHcChHHHHHHHHHHHHHHhh
Confidence 358899999999999886666777777666554
No 70
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=97.98 E-value=0.00026 Score=64.11 Aligned_cols=85 Identities=18% Similarity=0.117 Sum_probs=65.3
Q ss_pred hhhcccCcceEEec-----CCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHH
Q 046553 106 LLLSHRAIGGFLTH-----CGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEK 179 (232)
Q Consensus 106 ~lL~~~~~~~~I~h-----gG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~ 179 (232)
.++..+++ ++.. +|..++.||+++|+|+|..|...++......+.+ |+++. . -+.+++..++.+
T Consensus 315 ~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~--~------~d~~~La~~l~~ 384 (425)
T PRK05749 315 LLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQ--V------EDAEDLAKAVTY 384 (425)
T ss_pred HHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEE--E------CCHHHHHHHHHH
Confidence 57788886 4331 3445699999999999999988888777777766 76553 2 357899999999
Q ss_pred HHcCChhhHHHHHHHHHHHHH
Q 046553 180 LMDRGKQGEKRRKRTRQLGEI 200 (232)
Q Consensus 180 vl~d~~~~~~~~~~a~~l~~~ 200 (232)
+++|++..++|.+++++..+.
T Consensus 385 ll~~~~~~~~m~~~a~~~~~~ 405 (425)
T PRK05749 385 LLTDPDARQAYGEAGVAFLKQ 405 (425)
T ss_pred HhcCHHHHHHHHHHHHHHHHh
Confidence 999987777888887776655
No 71
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=97.97 E-value=0.00047 Score=59.07 Aligned_cols=94 Identities=23% Similarity=0.192 Sum_probs=63.9
Q ss_pred CCCeEEecccchh-hhhcccCcceEEecCC----chhHHHHHHhCCCeeecccccchhHHHHHHHhhhhhcccccCCCcc
Q 046553 93 GRGFIIRGWAPQV-LLLSHRAIGGFLTHCG----WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLV 167 (232)
Q Consensus 93 ~~nv~v~~~~pq~-~lL~~~~~~~~I~hgG----~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~ 167 (232)
..++.+.++.+.. .++..+++ +|.... .+++.||+++|+|+|+.+.. .+...+.+ .|.....
T Consensus 250 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~----~~~e~~~~-~g~~~~~------ 316 (365)
T cd03807 250 EDKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDVG----DNAELVGD-TGFLVPP------ 316 (365)
T ss_pred CceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCCC----ChHHHhhc-CCEEeCC------
Confidence 3566666655444 58888888 775544 47999999999999986543 34444444 3333443
Q ss_pred cCHHHHHHHHHHHHcCChhhHHHHHHHHHHHH
Q 046553 168 IKREKVKEAIEKLMDRGKQGEKRRKRTRQLGE 199 (232)
Q Consensus 168 ~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~ 199 (232)
-+.+++.+++.++++|++..+++.+++.+...
T Consensus 317 ~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 348 (365)
T cd03807 317 GDPEALAEAIEALLADPALRQALGEAARERIE 348 (365)
T ss_pred CCHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 35889999999999988666666666655443
No 72
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=97.97 E-value=0.001 Score=57.74 Aligned_cols=95 Identities=19% Similarity=0.158 Sum_probs=67.3
Q ss_pred CCCeEEecccc-hh---hhhcccCcceEEecC----CchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccC
Q 046553 93 GRGFIIRGWAP-QV---LLLSHRAIGGFLTHC----GWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDK 163 (232)
Q Consensus 93 ~~nv~v~~~~p-q~---~lL~~~~~~~~I~hg----G~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~ 163 (232)
..++.+.+|++ +. .++..+++ ++... ...++.||+++|+|+|+.... .....+.+ +.|.....
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~~~~~~g~~~~~-- 314 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIVDHGVTGYLAKP-- 314 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCC----CChhheeCCCceEEeCC--
Confidence 45678888998 32 46888887 77643 357999999999999987543 22233444 45665554
Q ss_pred CCcccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHH
Q 046553 164 SGLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGE 199 (232)
Q Consensus 164 ~~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~ 199 (232)
.+.+++.+++.++++|++..+++.+++++...
T Consensus 315 ----~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 346 (365)
T cd03825 315 ----GDPEDLAEGIEWLLADPDEREELGEAARELAE 346 (365)
T ss_pred ----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 46889999999999988666667777666543
No 73
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.96 E-value=0.00019 Score=63.34 Aligned_cols=93 Identities=14% Similarity=0.147 Sum_probs=65.5
Q ss_pred CCeEEecccchh-hhhcccCcceEE--ec--CCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcc
Q 046553 94 RGFIIRGWAPQV-LLLSHRAIGGFL--TH--CGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLV 167 (232)
Q Consensus 94 ~nv~v~~~~pq~-~lL~~~~~~~~I--~h--gG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~ 167 (232)
.++.+.++..+. .++..+++ +| ++ |-..++.||+++|+|+|+.+..+ +...+.+ ..|...+.
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i~~~~~g~~~~~------ 322 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELVQHGVTGALVPP------ 322 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHhcCCCceEEeCC------
Confidence 455665655444 68888888 65 33 33669999999999999976533 4555656 56666654
Q ss_pred cCHHHHHHHHHHHHcCChhhHHHHHHHHHHH
Q 046553 168 IKREKVKEAIEKLMDRGKQGEKRRKRTRQLG 198 (232)
Q Consensus 168 ~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~ 198 (232)
-+.+++.++|.++++|++..+.+.+++++..
T Consensus 323 ~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~ 353 (374)
T TIGR03088 323 GDAVALARALQPYVSDPAARRAHGAAGRARA 353 (374)
T ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 3688999999999998766666666666544
No 74
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.96 E-value=0.00042 Score=63.50 Aligned_cols=147 Identities=19% Similarity=0.174 Sum_probs=83.4
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHh-----cCCCeEEecccchhh
Q 046553 32 PWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERA-----KGRGFIIRGWAPQVL 106 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-----~~~nv~v~~~~pq~~ 106 (232)
+..++|.+|.+....+++.+....+.|.+.+.-.+|........ ...+...+ ..+.+.+.++.|...
T Consensus 283 ~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~--------~~~l~~~~~~~Gv~~~Ri~f~~~~~~~e 354 (468)
T PF13844_consen 283 EDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASG--------EARLRRRFAAHGVDPDRIIFSPVAPREE 354 (468)
T ss_dssp SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTH--------HHHHHHHHHHTTS-GGGEEEEE---HHH
T ss_pred CCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHH--------HHHHHHHHHHcCCChhhEEEcCCCCHHH
Confidence 45699999999998889988888888888888888887654321 12222222 246677777776543
Q ss_pred ---hhcccCcceEE---ecCCchhHHHHHHhCCCeeecccccch-hHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHH
Q 046553 107 ---LLSHRAIGGFL---THCGWNSTLEGVSAGVPLVTRPLFAEQ-FYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIE 178 (232)
Q Consensus 107 ---lL~~~~~~~~I---~hgG~~sv~eal~~GvP~i~~P~~~DQ-~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~ 178 (232)
.+..+++ ++ ..+|.+|+.||+++|||+|.+|--.-. ..-|..+.. |+.-++-. +.++..+...
T Consensus 355 hl~~~~~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~-------s~~eYv~~Av 425 (468)
T PF13844_consen 355 HLRRYQLADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD-------SEEEYVEIAV 425 (468)
T ss_dssp HHHHGGG-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S-------SHHHHHHHHH
T ss_pred HHHHhhhCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC-------CHHHHHHHHH
Confidence 3444555 55 356889999999999999999943322 223344444 66655433 4666655555
Q ss_pred HHHcCChhhHHHHHHHH
Q 046553 179 KLMDRGKQGEKRRKRTR 195 (232)
Q Consensus 179 ~vl~d~~~~~~~~~~a~ 195 (232)
++-.|+++.+.+|++.+
T Consensus 426 ~La~D~~~l~~lR~~Lr 442 (468)
T PF13844_consen 426 RLATDPERLRALRAKLR 442 (468)
T ss_dssp HHHH-HHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHH
Confidence 67777766666666654
No 75
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.95 E-value=0.00011 Score=55.95 Aligned_cols=107 Identities=19% Similarity=0.172 Sum_probs=68.8
Q ss_pred EEEEeCCCCCCCHHHHHH--HHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecc--cchh-hhhcc
Q 046553 36 IYACLGSICGLATWQLLE--LGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGW--APQV-LLLSH 110 (232)
Q Consensus 36 V~vs~GS~~~~~~~~~~~--l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~--~pq~-~lL~~ 110 (232)
+||+-||....-...+.. +..-...-.-++|..+|.... .| + .+..+.+| .+-. .+.+.
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d~--------kp------v--agl~v~~F~~~~kiQsli~d 65 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGDI--------KP------V--AGLRVYGFDKEEKIQSLIHD 65 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCCc--------cc------c--cccEEEeechHHHHHHHhhc
Confidence 789999985422333322 222222224588999987542 33 1 22344444 4444 46666
Q ss_pred cCcceEEecCCchhHHHHHHhCCCeeecccc--------cchhHHHHHHHh-hhhhccc
Q 046553 111 RAIGGFLTHCGWNSTLEGVSAGVPLVTRPLF--------AEQFYNDKLAVQ-AAVTWGL 160 (232)
Q Consensus 111 ~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~--------~DQ~~nA~~v~~-G~g~~~~ 160 (232)
+++ +|+|||.||+..++..++|.|++|-. .+|..-|..+.+ +.-+...
T Consensus 66 arI--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~~~vv~~s 122 (161)
T COG5017 66 ARI--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEINYVVACS 122 (161)
T ss_pred ceE--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhcCceEEEc
Confidence 665 99999999999999999999999953 367777877777 5544433
No 76
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=97.95 E-value=0.00045 Score=61.72 Aligned_cols=95 Identities=8% Similarity=-0.009 Sum_probs=69.7
Q ss_pred CCCeEEecccchh---hhhcccCcceEEec----CCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCC
Q 046553 93 GRGFIIRGWAPQV---LLLSHRAIGGFLTH----CGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKS 164 (232)
Q Consensus 93 ~~nv~v~~~~pq~---~lL~~~~~~~~I~h----gG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~ 164 (232)
.+++.+.+++|.. .+|..+++ +|.- +...++.||+++|+|+|+....+ ....+.+ ..|...+.
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~~~~g~~~~~--- 352 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVADGETGLLVDG--- 352 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhccCCceEECCC---
Confidence 3678899998764 57888888 5532 22458999999999999976532 3345555 56766554
Q ss_pred CcccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHH
Q 046553 165 GLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGE 199 (232)
Q Consensus 165 ~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~ 199 (232)
-+.+++.++|.++++|++..+++++++.+..+
T Consensus 353 ---~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~ 384 (405)
T TIGR03449 353 ---HDPADWADALARLLDDPRTRIRMGAAAVEHAA 384 (405)
T ss_pred ---CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 36899999999999988777777777776543
No 77
>PRK10307 putative glycosyl transferase; Provisional
Probab=97.95 E-value=0.00072 Score=60.78 Aligned_cols=146 Identities=15% Similarity=0.019 Sum_probs=90.3
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHHHhhC----CCcEEEEEcCCCCCccchhhhhhhhHHH---HhcCCCeEEecccchh-
Q 046553 34 SVIYACLGSICGLATWQLLELGLGLEAS----SQPFIWVIRGGERSQGLEKWIQEEGLEE---RAKGRGFIIRGWAPQV- 105 (232)
Q Consensus 34 ~vV~vs~GS~~~~~~~~~~~l~~~l~~~----~~~~i~~~~~~~~~~~~~~~~lp~~~~~---~~~~~nv~v~~~~pq~- 105 (232)
+.+++..|+... .+.+..+++++... +.+++ .+|... ..+.+.+ ....+++.+.+|+|+.
T Consensus 229 ~~~i~~~G~l~~--~kg~~~li~a~~~l~~~~~~~l~-ivG~g~---------~~~~l~~~~~~~~l~~v~f~G~~~~~~ 296 (412)
T PRK10307 229 KKIVLYSGNIGE--KQGLELVIDAARRLRDRPDLIFV-ICGQGG---------GKARLEKMAQCRGLPNVHFLPLQPYDR 296 (412)
T ss_pred CEEEEEcCcccc--ccCHHHHHHHHHHhccCCCeEEE-EECCCh---------hHHHHHHHHHHcCCCceEEeCCCCHHH
Confidence 355566787764 23344455554432 34554 344322 1122222 2233579999999864
Q ss_pred --hhhcccCcceEEecCCc------hhHHHHHHhCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHH
Q 046553 106 --LLLSHRAIGGFLTHCGW------NSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAI 177 (232)
Q Consensus 106 --~lL~~~~~~~~I~hgG~------~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i 177 (232)
.++..+++.++.++.+. +.+.|++++|+|+|+.+..+.. ....+. +.|+.... -+.+++.++|
T Consensus 297 ~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i~-~~G~~~~~------~d~~~la~~i 367 (412)
T PRK10307 297 LPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLVE-GIGVCVEP------ESVEALVAAI 367 (412)
T ss_pred HHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHHh-CCcEEeCC------CCHHHHHHHH
Confidence 47888888555555442 2468999999999998754321 112222 45555554 3689999999
Q ss_pred HHHHcCChhhHHHHHHHHHHHHH
Q 046553 178 EKLMDRGKQGEKRRKRTRQLGEI 200 (232)
Q Consensus 178 ~~vl~d~~~~~~~~~~a~~l~~~ 200 (232)
.++++|++..+.+++++++..+.
T Consensus 368 ~~l~~~~~~~~~~~~~a~~~~~~ 390 (412)
T PRK10307 368 AALARQALLRPKLGTVAREYAER 390 (412)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHH
Confidence 99999887777888888776553
No 78
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=97.94 E-value=0.00045 Score=59.95 Aligned_cols=152 Identities=11% Similarity=-0.020 Sum_probs=90.9
Q ss_pred CcEEEEEeCCCCCC-CHHHHHHHHHHHhh--CCCcEEEEEcCCCCCccchhhhhhhhHHH---Hhc-CCCeEEecccchh
Q 046553 33 WSVIYACLGSICGL-ATWQLLELGLGLEA--SSQPFIWVIRGGERSQGLEKWIQEEGLEE---RAK-GRGFIIRGWAPQV 105 (232)
Q Consensus 33 ~~vV~vs~GS~~~~-~~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~---~~~-~~nv~v~~~~pq~ 105 (232)
...+++..|..... ..+.+.+.+..+.. .+.++++.-.+.. .+. +.+.+.+ ... ..++.+.+|.+..
T Consensus 184 ~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~-~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~ 257 (355)
T cd03819 184 GKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQG-RRF-----YYAELLELIKRLGLQDRVTFVGHCSDM 257 (355)
T ss_pred CceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcc-cch-----HHHHHHHHHHHcCCcceEEEcCCcccH
Confidence 34556667776653 24445555555544 3455444433322 111 1111211 112 4678888886554
Q ss_pred -hhhcccCcceEEec--C-CchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHH
Q 046553 106 -LLLSHRAIGGFLTH--C-GWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKL 180 (232)
Q Consensus 106 -~lL~~~~~~~~I~h--g-G~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~v 180 (232)
.++..+++-++-++ - ..+++.||+++|+|+|+.... .....+.+ +.|..... -+.+++.++|..+
T Consensus 258 ~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~----~~~e~i~~~~~g~~~~~------~~~~~l~~~i~~~ 327 (355)
T cd03819 258 PAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG----GARETVRPGETGLLVPP------GDAEALAQALDQI 327 (355)
T ss_pred HHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC----CcHHHHhCCCceEEeCC------CCHHHHHHHHHHH
Confidence 58888888333331 1 246999999999999987543 23455556 56776654 3688999999655
Q ss_pred H-cCChhhHHHHHHHHHHHHH
Q 046553 181 M-DRGKQGEKRRKRTRQLGEI 200 (232)
Q Consensus 181 l-~d~~~~~~~~~~a~~l~~~ 200 (232)
+ .++++.+++++++++..+.
T Consensus 328 ~~~~~~~~~~~~~~a~~~~~~ 348 (355)
T cd03819 328 LSLLPEGRAKMFAKARMCVET 348 (355)
T ss_pred HhhCHHHHHHHHHHHHHHHHH
Confidence 5 4677777788887776654
No 79
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.90 E-value=0.00026 Score=60.15 Aligned_cols=142 Identities=13% Similarity=0.076 Sum_probs=82.0
Q ss_pred CCcEEEEEeCCCCCCC-HHHHHHHHHHHhhC--CCcEEEEEcCCCCCccchhhhhhhhHHHHh-cCCCeEEecccchh-h
Q 046553 32 PWSVIYACLGSICGLA-TWQLLELGLGLEAS--SQPFIWVIRGGERSQGLEKWIQEEGLEERA-KGRGFIIRGWAPQV-L 106 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~-~~~~~~l~~~l~~~--~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq~-~ 106 (232)
+.+.+++..|+..... .+.+...+..+... +.++++. |.....+. + ..+.+.. ...++.+.++.+.. .
T Consensus 187 ~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~-G~~~~~~~-----~-~~~~~~~~~~~~v~~~g~~~~~~~ 259 (353)
T cd03811 187 PDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVIL-GDGPLREE-----L-EALAKELGLADRVHFLGFQSNPYP 259 (353)
T ss_pred CCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEE-cCCccHHH-----H-HHHHHhcCCCccEEEecccCCHHH
Confidence 3446677778776421 23333333333332 4555544 33221110 1 1111222 24678888887765 5
Q ss_pred hhcccCcceEEec----CCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHH---HHHHH
Q 046553 107 LLSHRAIGGFLTH----CGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKV---KEAIE 178 (232)
Q Consensus 107 lL~~~~~~~~I~h----gG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l---~~~i~ 178 (232)
++..+++ +|.- |..+++.||+++|+|+|+.... .....+.+ ..|...+.+ +.+.+ ...+.
T Consensus 260 ~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~~~g~~~~~~------~~~~~~~~~~~i~ 327 (353)
T cd03811 260 YLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILEDGENGLLVPVG------DEAALAAAALALL 327 (353)
T ss_pred HHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcCCCceEEECCC------CHHHHHHHHHHHH
Confidence 8888887 5532 3356899999999999986553 45566777 777766653 46666 56666
Q ss_pred HHHcCChhhHHHHH
Q 046553 179 KLMDRGKQGEKRRK 192 (232)
Q Consensus 179 ~vl~d~~~~~~~~~ 192 (232)
.++.+++..+.+++
T Consensus 328 ~~~~~~~~~~~~~~ 341 (353)
T cd03811 328 DLLLDPELRERLAA 341 (353)
T ss_pred hccCChHHHHHHHH
Confidence 77777654455555
No 80
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.89 E-value=0.00068 Score=60.75 Aligned_cols=94 Identities=22% Similarity=0.223 Sum_probs=68.0
Q ss_pred cCCCeEEecccchh-hhhcccCcceEE--ec--CCc-hhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCC
Q 046553 92 KGRGFIIRGWAPQV-LLLSHRAIGGFL--TH--CGW-NSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKS 164 (232)
Q Consensus 92 ~~~nv~v~~~~pq~-~lL~~~~~~~~I--~h--gG~-~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~ 164 (232)
..+++.+.+++++. .++..+++ +| ++ .|. +.+.||+++|+|+|+.+...+.. ... |.|+...
T Consensus 278 ~~~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~~~g~lv~---- 346 (397)
T TIGR03087 278 ALPGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALPGAELLVA---- 346 (397)
T ss_pred cCCCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccCCcceEeC----
Confidence 35789999999875 58888888 55 33 343 36999999999999998643221 123 5666553
Q ss_pred CcccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHH
Q 046553 165 GLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGE 199 (232)
Q Consensus 165 ~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~ 199 (232)
-+.+++.++|.++++|++..+.+.+++++..+
T Consensus 347 ---~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v~ 378 (397)
T TIGR03087 347 ---ADPADFAAAILALLANPAEREELGQAARRRVL 378 (397)
T ss_pred ---CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 25899999999999998766777777776543
No 81
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.88 E-value=0.00035 Score=61.77 Aligned_cols=148 Identities=14% Similarity=0.136 Sum_probs=85.0
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHHHhhC--CCcEEEEEcCCCCCccchhhhhhhhHHHHh-cCCCeEEecccchh-----
Q 046553 34 SVIYACLGSICGLATWQLLELGLGLEAS--SQPFIWVIRGGERSQGLEKWIQEEGLEERA-KGRGFIIRGWAPQV----- 105 (232)
Q Consensus 34 ~vV~vs~GS~~~~~~~~~~~l~~~l~~~--~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq~----- 105 (232)
+.+++..|.......+.+..+++++... +.+++++-.+.. .+ . + ..+.+.. .+.++.+.+|.++.
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~ivG~g~~-~~---~--l-~~~~~~~~l~~~v~f~G~~~~~~~~~~ 252 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHIIGDGSD-FE---K--C-KAYSRELGIEQRIIWHGWQSQPWEVVQ 252 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEEeCCcc-HH---H--H-HHHHHHcCCCCeEEEecccCCcHHHHH
Confidence 3455667776432223345566666544 345554433321 11 0 1 1111111 24688899987542
Q ss_pred hhhcccCcceEEec----CCchhHHHHHHhCCCeeecc-cccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHH
Q 046553 106 LLLSHRAIGGFLTH----CGWNSTLEGVSAGVPLVTRP-LFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEK 179 (232)
Q Consensus 106 ~lL~~~~~~~~I~h----gG~~sv~eal~~GvP~i~~P-~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~ 179 (232)
..+..+++ +|.. |-..++.||+++|+|+|+.. ..+ ....+++ ..|..... -+.+++.++|.+
T Consensus 253 ~~~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~~~~G~lv~~------~d~~~la~~i~~ 320 (359)
T PRK09922 253 QKIKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKPGLNGELYTP------GNIDEFVGKLNK 320 (359)
T ss_pred HHHhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccCCCceEEECC------CCHHHHHHHHHH
Confidence 23445666 5543 22679999999999999875 332 2234555 55666554 479999999999
Q ss_pred HHcCCh--hhHHHHHHHHHHHHH
Q 046553 180 LMDRGK--QGEKRRKRTRQLGEI 200 (232)
Q Consensus 180 vl~d~~--~~~~~~~~a~~l~~~ 200 (232)
+++|++ ....+++++++++..
T Consensus 321 l~~~~~~~~~~~~~~~~~~~~~~ 343 (359)
T PRK09922 321 VISGEVKYQHDAIPNSIERFYEV 343 (359)
T ss_pred HHhCcccCCHHHHHHHHHHhhHH
Confidence 999885 233455555555443
No 82
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.87 E-value=0.0007 Score=58.21 Aligned_cols=92 Identities=13% Similarity=0.083 Sum_probs=64.8
Q ss_pred CCCeEEecccchh---hhhcccCcceEEecC----CchhHHHHHHhCCCeeecccccchhHHHHHHHhhhhhcccccCCC
Q 046553 93 GRGFIIRGWAPQV---LLLSHRAIGGFLTHC----GWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSG 165 (232)
Q Consensus 93 ~~nv~v~~~~pq~---~lL~~~~~~~~I~hg----G~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~ 165 (232)
.+++.+.+|+++. .++..+++ +|.-. -..++.||+++|+|+|+.+..+ ....+..+.|.....
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~----~~~~~~~~~~~~~~~---- 330 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDKVP----WQELIEYGCGWVVDD---- 330 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCCCC----HHHHhhcCceEEeCC----
Confidence 5788899999953 46788887 54432 2568999999999999976533 222222244444332
Q ss_pred cccCHHHHHHHHHHHHcCChhhHHHHHHHHHH
Q 046553 166 LVIKREKVKEAIEKLMDRGKQGEKRRKRTRQL 197 (232)
Q Consensus 166 ~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l 197 (232)
+.+++.++|.+++.|++..+++.+++++.
T Consensus 331 ---~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 359 (375)
T cd03821 331 ---DVDALAAALRRALELPQRLKAMGENGRAL 359 (375)
T ss_pred ---ChHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 34889999999999986777777777766
No 83
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.84 E-value=0.00093 Score=59.08 Aligned_cols=151 Identities=17% Similarity=0.112 Sum_probs=88.4
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHhhC--CCcEEEEEcCCCCCccchhhhhhhhHHHHh---c--CCCeEE-ecccchh-
Q 046553 35 VIYACLGSICGLATWQLLELGLGLEAS--SQPFIWVIRGGERSQGLEKWIQEEGLEERA---K--GRGFII-RGWAPQV- 105 (232)
Q Consensus 35 vV~vs~GS~~~~~~~~~~~l~~~l~~~--~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~---~--~~nv~v-~~~~pq~- 105 (232)
.+++..|.... .+.+..+++++... +.++++..++..... +-+.+.+.. . ..++.. .+++|..
T Consensus 202 ~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~l~i~g~g~~~~~------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 273 (388)
T TIGR02149 202 PYILFVGRITR--QKGVPHLLDAVHYIPKDVQVVLCAGAPDTPE------VAEEVRQAVALLDRNRTGIIWINKMLPKEE 273 (388)
T ss_pred eEEEEEccccc--ccCHHHHHHHHHHHhhcCcEEEEeCCCCcHH------HHHHHHHHHHHhccccCceEEecCCCCHHH
Confidence 34556677664 23344555555443 566666555433211 112222211 1 233543 3567653
Q ss_pred --hhhcccCcceEEec----CCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHH
Q 046553 106 --LLLSHRAIGGFLTH----CGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIE 178 (232)
Q Consensus 106 --~lL~~~~~~~~I~h----gG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~ 178 (232)
.++..+++ +|.- +-..++.||+++|+|+|+.... .....++. ..|...+.++....-..+.+.++|.
T Consensus 274 ~~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~ 347 (388)
T TIGR02149 274 LVELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVVVDGETGFLVPPDNSDADGFQAELAKAIN 347 (388)
T ss_pred HHHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHhhCCCceEEcCCCCCcccchHHHHHHHHH
Confidence 47888887 6643 2245789999999999997653 35566666 6777766532000011278999999
Q ss_pred HHHcCChhhHHHHHHHHHHHH
Q 046553 179 KLMDRGKQGEKRRKRTRQLGE 199 (232)
Q Consensus 179 ~vl~d~~~~~~~~~~a~~l~~ 199 (232)
++++|++..+++.+++++...
T Consensus 348 ~l~~~~~~~~~~~~~a~~~~~ 368 (388)
T TIGR02149 348 ILLADPELAKKMGIAGRKRAE 368 (388)
T ss_pred HHHhCHHHHHHHHHHHHHHHH
Confidence 999988777777777766543
No 84
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=97.76 E-value=0.00088 Score=59.33 Aligned_cols=93 Identities=19% Similarity=0.083 Sum_probs=67.2
Q ss_pred CCCeEEecccchh---hhhcccCcceEEecCC----chhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCC
Q 046553 93 GRGFIIRGWAPQV---LLLSHRAIGGFLTHCG----WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKS 164 (232)
Q Consensus 93 ~~nv~v~~~~pq~---~lL~~~~~~~~I~hgG----~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~ 164 (232)
.+++.+.+++|.. .++..+++ ++.... ..++.||+++|+|+|+.-..+ ....+.. +.|....
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~~~~g~~~~---- 348 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVDGETGFLCE---- 348 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhccCCceEEeC----
Confidence 4688999999875 46788887 553211 357899999999999974432 3344555 5666543
Q ss_pred CcccCHHHHHHHHHHHHcCChhhHHHHHHHHHHH
Q 046553 165 GLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLG 198 (232)
Q Consensus 165 ~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~ 198 (232)
.+.+++.++|.++++|++..+++.+++++..
T Consensus 349 ---~~~~~~a~~i~~l~~~~~~~~~~~~~a~~~~ 379 (392)
T cd03805 349 ---PTPEEFAEAMLKLANDPDLADRMGAAGRKRV 379 (392)
T ss_pred ---CCHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 2578899999999999877777877776654
No 85
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=97.74 E-value=0.00077 Score=61.03 Aligned_cols=91 Identities=16% Similarity=0.205 Sum_probs=66.3
Q ss_pred CCeEEe-cccchh---hhhcccCcceEEe-c---CC---chhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccc
Q 046553 94 RGFIIR-GWAPQV---LLLSHRAIGGFLT-H---CG---WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLE 161 (232)
Q Consensus 94 ~nv~v~-~~~pq~---~lL~~~~~~~~I~-h---gG---~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~ 161 (232)
+++.+. +|+|.. .+|..+++ ++. + -| .+++.||+++|+|+|+.... .....+++ +.|+...
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~----~~~eiv~~~~~G~lv~- 366 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK----CIDELVKHGENGLVFG- 366 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCCC----CHHHHhcCCCCEEEEC-
Confidence 456544 588754 47888888 553 1 12 44799999999999996542 45566777 6776652
Q ss_pred cCCCcccCHHHHHHHHHHHHcC---ChhhHHHHHHHHHHH
Q 046553 162 DKSGLVIKREKVKEAIEKLMDR---GKQGEKRRKRTRQLG 198 (232)
Q Consensus 162 ~~~~~~~~~~~l~~~i~~vl~d---~~~~~~~~~~a~~l~ 198 (232)
+.+++.++|.++++| ++..+.|++++++.+
T Consensus 367 -------d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 367 -------DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred -------CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 478999999999998 777788888887766
No 86
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=97.67 E-value=0.00098 Score=57.90 Aligned_cols=143 Identities=16% Similarity=0.112 Sum_probs=81.5
Q ss_pred CcEEEEEeCCCCCCC-HHHHHHHHHHHhhC--CCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchh-hhh
Q 046553 33 WSVIYACLGSICGLA-TWQLLELGLGLEAS--SQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQV-LLL 108 (232)
Q Consensus 33 ~~vV~vs~GS~~~~~-~~~~~~l~~~l~~~--~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~-~lL 108 (232)
.+.+++..|+..... .+.+...+..+.+. +.++++.-.++.. .. +-..+.+.-...++.+.++..+. .++
T Consensus 191 ~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~-~~-----~~~~~~~~~~~~~v~~~g~~~~~~~~~ 264 (358)
T cd03812 191 DKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGELE-EE-----IKKKVKELGLEDKVIFLGVRNDVPELL 264 (358)
T ss_pred CCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCchH-HH-----HHHHHHhcCCCCcEEEecccCCHHHHH
Confidence 345566777776532 34344444444332 4455544322211 00 11111111124678888875554 688
Q ss_pred cccCcceEEec----CCchhHHHHHHhCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcCC
Q 046553 109 SHRAIGGFLTH----CGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDRG 184 (232)
Q Consensus 109 ~~~~~~~~I~h----gG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d~ 184 (232)
..+++ +|+- |-..++.||+++|+|+|+....+ ....+.++.+..... -+++++.++|.++++|+
T Consensus 265 ~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i~~~~~~~~~~------~~~~~~a~~i~~l~~~~ 332 (358)
T cd03812 265 QAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDLTDLVKFLSLD------ESPEIWAEEILKLKSED 332 (358)
T ss_pred HhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhhccCccEEeCC------CCHHHHHHHHHHHHhCc
Confidence 88888 5543 34678999999999999976543 223333333443332 35799999999999998
Q ss_pred hhhHHHHHH
Q 046553 185 KQGEKRRKR 193 (232)
Q Consensus 185 ~~~~~~~~~ 193 (232)
+..+++..+
T Consensus 333 ~~~~~~~~~ 341 (358)
T cd03812 333 RRERSSESI 341 (358)
T ss_pred chhhhhhhh
Confidence 555444433
No 87
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.65 E-value=0.0022 Score=55.58 Aligned_cols=77 Identities=9% Similarity=0.122 Sum_probs=54.3
Q ss_pred CCCeEEecccchh-hhhcccCcceEEecCC----chhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCc
Q 046553 93 GRGFIIRGWAPQV-LLLSHRAIGGFLTHCG----WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGL 166 (232)
Q Consensus 93 ~~nv~v~~~~pq~-~lL~~~~~~~~I~hgG----~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~ 166 (232)
..++.+.++..+. .++..+++ +|.-.. .+++.||+++|+|+|+... ..+...+.+ |..+ ..
T Consensus 244 ~~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~g~~~--~~----- 310 (360)
T cd04951 244 SNRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVATDA----GGVREVVGDSGLIV--PI----- 310 (360)
T ss_pred CCcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEecC----CChhhEecCCceEe--CC-----
Confidence 4678888877654 68888888 555432 5789999999999998543 344445555 4433 33
Q ss_pred ccCHHHHHHHHHHHHcC
Q 046553 167 VIKREKVKEAIEKLMDR 183 (232)
Q Consensus 167 ~~~~~~l~~~i~~vl~d 183 (232)
-+.+++.+++.+++++
T Consensus 311 -~~~~~~~~~i~~ll~~ 326 (360)
T cd04951 311 -SDPEALANKIDEILKM 326 (360)
T ss_pred -CCHHHHHHHHHHHHhC
Confidence 3688999999999853
No 88
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.63 E-value=0.004 Score=55.94 Aligned_cols=99 Identities=17% Similarity=0.167 Sum_probs=76.2
Q ss_pred CeEEecccchh-hhhcccCc----ceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCccc
Q 046553 95 GFIIRGWAPQV-LLLSHRAI----GGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVI 168 (232)
Q Consensus 95 nv~v~~~~pq~-~lL~~~~~----~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~ 168 (232)
++.+.+-+--+ .+++-+++ +-++.+||.| ..|.+++|+|+|.=|+..-|.+-++++.. |+++.++.
T Consensus 301 dV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~------- 372 (419)
T COG1519 301 DVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVED------- 372 (419)
T ss_pred cEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEECC-------
Confidence 45555444434 34444443 1134588887 78999999999999999999999999999 99987653
Q ss_pred CHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHH
Q 046553 169 KREKVKEAIEKLMDRGKQGEKRRKRTRQLGEIAN 202 (232)
Q Consensus 169 ~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~~ 202 (232)
.+.+.+++..++.|++..+.|.+++.++-...+
T Consensus 373 -~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~~~~ 405 (419)
T COG1519 373 -ADLLAKAVELLLADEDKREAYGRAGLEFLAQNR 405 (419)
T ss_pred -HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhh
Confidence 677899999999988888888888888777765
No 89
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=97.61 E-value=0.0014 Score=58.68 Aligned_cols=98 Identities=16% Similarity=0.074 Sum_probs=70.6
Q ss_pred CCCeEEecccchh---hhhcccCcceEEecC-C-chhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCc
Q 046553 93 GRGFIIRGWAPQV---LLLSHRAIGGFLTHC-G-WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGL 166 (232)
Q Consensus 93 ~~nv~v~~~~pq~---~lL~~~~~~~~I~hg-G-~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~ 166 (232)
.+++.+.+++|+. .+|..+++-++.+.. | ..++.||+++|+|+|.... ......+.+ ..|...+.
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i~~~~~G~lv~~----- 350 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVITDGENGLLVDF----- 350 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhcccCCceEEcCC-----
Confidence 4688899999875 467788883333332 2 2479999999999998754 344555655 56666654
Q ss_pred ccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHH
Q 046553 167 VIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGEI 200 (232)
Q Consensus 167 ~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~ 200 (232)
-+++++.++|.++++|++..+++.+++++..+.
T Consensus 351 -~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~ 383 (396)
T cd03818 351 -FDPDALAAAVIELLDDPARRARLRRAARRTALR 383 (396)
T ss_pred -CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 368999999999999987777777777765544
No 90
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.60 E-value=0.0019 Score=59.54 Aligned_cols=96 Identities=17% Similarity=0.102 Sum_probs=67.8
Q ss_pred CCCeEEecccchhhhhcccCcceEEec----CCchhHHHHHHhCCCeeecccccchhHHHHHHHh-h------hhhcccc
Q 046553 93 GRGFIIRGWAPQVLLLSHRAIGGFLTH----CGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-A------AVTWGLE 161 (232)
Q Consensus 93 ~~nv~v~~~~pq~~lL~~~~~~~~I~h----gG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G------~g~~~~~ 161 (232)
.+++.+.+...-..++..+++ +|.- |-..++.||+++|+|+|+.... .....+.+ + .|.....
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~g----~~~elv~~~~~~~~g~~G~lv~~ 426 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDVG----SCRELIEGADDEALGPAGEVVPP 426 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCCC----ChHHHhcCCcccccCCceEEECC
Confidence 468888885555678888887 5543 3356899999999999996442 23333333 2 5665554
Q ss_pred cCCCcccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHH
Q 046553 162 DKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGEI 200 (232)
Q Consensus 162 ~~~~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~ 200 (232)
.+.+++.++|.+++.|++..+++.+++++..+.
T Consensus 427 ------~d~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~ 459 (475)
T cd03813 427 ------ADPEALARAILRLLKDPELRRAMGEAGRKRVER 459 (475)
T ss_pred ------CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 468999999999999987777777777654443
No 91
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.49 E-value=0.0019 Score=55.72 Aligned_cols=98 Identities=18% Similarity=0.166 Sum_probs=64.6
Q ss_pred cCCCeEEecccchh---hhhcccCcceEEec--CCchhHHHHHHhCCCeeecccccchhHHHHHHHhhhhhcccccCCCc
Q 046553 92 KGRGFIIRGWAPQV---LLLSHRAIGGFLTH--CGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGL 166 (232)
Q Consensus 92 ~~~nv~v~~~~pq~---~lL~~~~~~~~I~h--gG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~ 166 (232)
...++.+.+++|+. .++..+++-++-+. +...++.||+++|+|+|+....+ ....+.+ .|.....
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~-~~~~~~~----- 320 (365)
T cd03809 251 LGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVAGD-AALYFDP----- 320 (365)
T ss_pred CCCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCC----ccceecC-ceeeeCC-----
Confidence 36788999999765 47778887222221 23558999999999999965422 1111222 2233333
Q ss_pred ccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHH
Q 046553 167 VIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGEI 200 (232)
Q Consensus 167 ~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~ 200 (232)
-+.+++.++|.+++.|++....+.+++++..+.
T Consensus 321 -~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 353 (365)
T cd03809 321 -LDPEALAAAIERLLEDPALREELRERGLARAKR 353 (365)
T ss_pred -CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 368899999999999986666777776654443
No 92
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=97.44 E-value=0.0058 Score=55.71 Aligned_cols=95 Identities=13% Similarity=0.020 Sum_probs=65.7
Q ss_pred CCCeEEecccchhh---hhccc--CcceEEecC---C-chhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhccccc
Q 046553 93 GRGFIIRGWAPQVL---LLSHR--AIGGFLTHC---G-WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLED 162 (232)
Q Consensus 93 ~~nv~v~~~~pq~~---lL~~~--~~~~~I~hg---G-~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~ 162 (232)
..++.+.+++++.. ++..+ +..+||... | ..++.||+++|+|+|+....+ ....+.+ ..|+....
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv~~~~~G~lv~~- 390 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDIIANCRNGLLVDV- 390 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHhcCCCcEEEeCC-
Confidence 35677777777543 46555 112377643 2 458999999999999986532 4455555 56776655
Q ss_pred CCCcccCHHHHHHHHHHHHcCChhhHHHHHHHHHH
Q 046553 163 KSGLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQL 197 (232)
Q Consensus 163 ~~~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l 197 (232)
-+++++.++|.++++|++..+.+.+++++.
T Consensus 391 -----~d~~~la~~i~~ll~~~~~~~~~~~~a~~~ 420 (439)
T TIGR02472 391 -----LDLEAIASALEDALSDSSQWQLWSRNGIEG 420 (439)
T ss_pred -----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 368999999999999986666677766653
No 93
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=97.40 E-value=0.02 Score=50.68 Aligned_cols=159 Identities=11% Similarity=-0.009 Sum_probs=86.3
Q ss_pred HHHHhcCCCCCcEEEEEeCCCCCCC-HHHHHHHHHHHhh--CCCcEEEEEcCCCCCccchhhhhhhhHHHHh-cCCCeEE
Q 046553 23 CLKWLDSWEPWSVIYACLGSICGLA-TWQLLELGLGLEA--SSQPFIWVIRGGERSQGLEKWIQEEGLEERA-KGRGFII 98 (232)
Q Consensus 23 l~~~l~~~~~~~vV~vs~GS~~~~~-~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v 98 (232)
....+...++++ +++..|.+.... .+.+.+.+..+.+ .+.+++++-++......... .-+.+.+.. ..+++.+
T Consensus 180 ~~~~~~~~~~~~-~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~--~~~~~~~~~~~~~~v~~ 256 (372)
T cd03792 180 ILEKYGIDPERP-YITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWI--VYEEVLEYAEGDPDIHV 256 (372)
T ss_pred HHHHhCCCCCCc-EEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHH--HHHHHHHHhCCCCCeEE
Confidence 344444433444 445677776522 3333333333322 34566655443321110000 111222112 2456777
Q ss_pred eccc--chh---hhhcccCcceEEecCC----chhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCccc
Q 046553 99 RGWA--PQV---LLLSHRAIGGFLTHCG----WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVI 168 (232)
Q Consensus 99 ~~~~--pq~---~lL~~~~~~~~I~hgG----~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~ 168 (232)
.++. +.. .+++.+++ |+...- ..++.||+++|+|+|+.+..+ ....+.+ ..|+...
T Consensus 257 ~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~~~~g~~~~-------- 322 (372)
T cd03792 257 LTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIEDGETGFLVD-------- 322 (372)
T ss_pred EecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhcccCCceEEeC--------
Confidence 7776 332 47778887 775432 458999999999999976432 2334555 5555432
Q ss_pred CHHHHHHHHHHHHcCChhhHHHHHHHHHHH
Q 046553 169 KREKVKEAIEKLMDRGKQGEKRRKRTRQLG 198 (232)
Q Consensus 169 ~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~ 198 (232)
+.+.+..+|.+++.|++..++|.+++++..
T Consensus 323 ~~~~~a~~i~~ll~~~~~~~~~~~~a~~~~ 352 (372)
T cd03792 323 TVEEAAVRILYLLRDPELRRKMGANAREHV 352 (372)
T ss_pred CcHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 245677899999998866667777766643
No 94
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.38 E-value=0.0061 Score=52.93 Aligned_cols=139 Identities=18% Similarity=0.145 Sum_probs=78.5
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHhhC--CCcEEEEEcCCCCCccchhhhhhhhHHHHh-cCCCeEEecccchh---hhhcc
Q 046553 37 YACLGSICGLATWQLLELGLGLEAS--SQPFIWVIRGGERSQGLEKWIQEEGLEERA-KGRGFIIRGWAPQV---LLLSH 110 (232)
Q Consensus 37 ~vs~GS~~~~~~~~~~~l~~~l~~~--~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq~---~lL~~ 110 (232)
++..|+... .+.+..+++++... +.+++++-.+.... . +.+.+.+.. ..+++.+.+++|+. .++..
T Consensus 196 i~~~G~~~~--~Kg~~~li~a~~~l~~~~~l~ivG~~~~~~-~-----~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ 267 (363)
T cd04955 196 YLLVGRIVP--ENNIDDLIEAFSKSNSGKKLVIVGNADHNT-P-----YGKLLKEKAAADPRIIFVGPIYDQELLELLRY 267 (363)
T ss_pred EEEEecccc--cCCHHHHHHHHHhhccCceEEEEcCCCCcc-h-----HHHHHHHHhCCCCcEEEccccChHHHHHHHHh
Confidence 345677664 23344555666544 35655444332211 1 212222112 35789999999875 45666
Q ss_pred cCcceEEecCCc-----hhHHHHHHhCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcCCh
Q 046553 111 RAIGGFLTHCGW-----NSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGK 185 (232)
Q Consensus 111 ~~~~~~I~hgG~-----~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d~~ 185 (232)
+++ ++.+.-. +++.||+++|+|+|+....+. ...+.. .|...... + .+.+++.++++|++
T Consensus 268 ad~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~----~e~~~~-~g~~~~~~------~--~l~~~i~~l~~~~~ 332 (363)
T cd04955 268 AAL--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN----REVLGD-KAIYFKVG------D--DLASLLEELEADPE 332 (363)
T ss_pred CCE--EEeCCccCCCCChHHHHHHHcCCCEEEecCCcc----ceeecC-CeeEecCc------h--HHHHHHHHHHhCHH
Confidence 676 5554332 479999999999999764321 111222 12222221 1 29999999999876
Q ss_pred hhHHHHHHHHHHH
Q 046553 186 QGEKRRKRTRQLG 198 (232)
Q Consensus 186 ~~~~~~~~a~~l~ 198 (232)
....+.+++.+..
T Consensus 333 ~~~~~~~~~~~~~ 345 (363)
T cd04955 333 EVSAMAKAARERI 345 (363)
T ss_pred HHHHHHHHHHHHH
Confidence 6666666665543
No 95
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.35 E-value=0.00039 Score=52.27 Aligned_cols=79 Identities=19% Similarity=0.255 Sum_probs=49.2
Q ss_pred CCCeEEecccchh-hhhcccCcceEEecC---CchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcc
Q 046553 93 GRGFIIRGWAPQV-LLLSHRAIGGFLTHC---GWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLV 167 (232)
Q Consensus 93 ~~nv~v~~~~pq~-~lL~~~~~~~~I~hg---G~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~ 167 (232)
.+++.+.+|++.. .+++.+++.+..+.. -.+++.|++++|+|+|+.+.. ....++. +.|... .
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~~~~~~~~~~-~------ 119 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIVEEDGCGVLV-A------ 119 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS---SEEEE--T------
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhheeecCCeEEE-C------
Confidence 4699999999755 588899986655432 247999999999999998761 1223333 555555 3
Q ss_pred cCHHHHHHHHHHHHcC
Q 046553 168 IKREKVKEAIEKLMDR 183 (232)
Q Consensus 168 ~~~~~l~~~i~~vl~d 183 (232)
-+++++.++|.++++|
T Consensus 120 ~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 120 NDPEELAEAIERLLND 135 (135)
T ss_dssp T-HHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHhcC
Confidence 3689999999999875
No 96
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.21 E-value=0.0019 Score=57.26 Aligned_cols=128 Identities=19% Similarity=0.153 Sum_probs=74.7
Q ss_pred CCCcEEEEEeCCCCCCC-H---HHHHHHHHHHhhC-CCcEEEEEcCCCCCccchhhhhhhhHHHHhc-CCCeEEecccch
Q 046553 31 EPWSVIYACLGSICGLA-T---WQLLELGLGLEAS-SQPFIWVIRGGERSQGLEKWIQEEGLEERAK-GRGFIIRGWAPQ 104 (232)
Q Consensus 31 ~~~~vV~vs~GS~~~~~-~---~~~~~l~~~l~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq 104 (232)
.+++.+++++=...... . ..+..++.++.+. ++++||.+..... ....+.+... -+|+.+...+++
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~--------~~~~i~~~l~~~~~v~~~~~l~~ 249 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPR--------GSDIIIEKLKKYDNVRLIEPLGY 249 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HH--------HHHHHHHHHTT-TTEEEE----H
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCch--------HHHHHHHHhcccCCEEEECCCCH
Confidence 46789999884444444 2 3455566666665 7788888753221 1122333222 148888766654
Q ss_pred ---hhhhcccCcceEEecCCchhHH-HHHHhCCCeeecccccchhHHHHHHHh---hhhhcccccCCCcccCHHHHHHHH
Q 046553 105 ---VLLLSHRAIGGFLTHCGWNSTL-EGVSAGVPLVTRPLFAEQFYNDKLAVQ---AAVTWGLEDKSGLVIKREKVKEAI 177 (232)
Q Consensus 105 ---~~lL~~~~~~~~I~hgG~~sv~-eal~~GvP~i~~P~~~DQ~~nA~~v~~---G~g~~~~~~~~~~~~~~~~l~~~i 177 (232)
..+|.++++ +|+-.| +++ ||.++|+|+|.+ ..+..|-+- |..+... .+.+.|..++
T Consensus 250 ~~~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~i------R~~geRqe~r~~~~nvlv~-------~~~~~I~~ai 312 (346)
T PF02350_consen 250 EEYLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNI------RDSGERQEGRERGSNVLVG-------TDPEAIIQAI 312 (346)
T ss_dssp HHHHHHHHHESE--EEESSH--HHHHHGGGGT--EEEC------SSS-S-HHHHHTTSEEEET-------SSHHHHHHHH
T ss_pred HHHHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEe------cCCCCCHHHHhhcceEEeC-------CCHHHHHHHH
Confidence 468889998 999998 566 999999999999 222222222 4444322 5789999999
Q ss_pred HHHHcC
Q 046553 178 EKLMDR 183 (232)
Q Consensus 178 ~~vl~d 183 (232)
++++.+
T Consensus 313 ~~~l~~ 318 (346)
T PF02350_consen 313 EKALSD 318 (346)
T ss_dssp HHHHH-
T ss_pred HHHHhC
Confidence 999985
No 97
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.16 E-value=0.029 Score=52.32 Aligned_cols=103 Identities=12% Similarity=0.045 Sum_probs=68.6
Q ss_pred CCCeEEecccchhhhhcccCcceEEec---CC-chhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhccccc-CCCc
Q 046553 93 GRGFIIRGWAPQVLLLSHRAIGGFLTH---CG-WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLED-KSGL 166 (232)
Q Consensus 93 ~~nv~v~~~~pq~~lL~~~~~~~~I~h---gG-~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~-~~~~ 166 (232)
..++.+.++.+...++..+++ +|.- =| ..++.||+++|+|+|+....+ -+...+++ .-|...... +.++
T Consensus 375 ~~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~~g~nG~lv~~~~~~~d 449 (500)
T TIGR02918 375 QDYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIEDNKNGYLIPIDEEEDD 449 (500)
T ss_pred CCeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHccCCCCEEEEeCCccccc
Confidence 456788888877788988888 6542 22 468999999999999975421 13445555 456655421 0000
Q ss_pred ccC-HHHHHHHHHHHHcCChhhHHHHHHHHHHHHHH
Q 046553 167 VIK-REKVKEAIEKLMDRGKQGEKRRKRTRQLGEIA 201 (232)
Q Consensus 167 ~~~-~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~ 201 (232)
.-+ .+.+.++|.++++ ++..++|.+++.+.++.+
T Consensus 450 ~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~a~~f 484 (500)
T TIGR02918 450 EDQIITALAEKIVEYFN-SNDIDAFHEYSYQIAEGF 484 (500)
T ss_pred hhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHhc
Confidence 012 7789999999995 556677888888766654
No 98
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=97.15 E-value=0.046 Score=48.91 Aligned_cols=133 Identities=14% Similarity=0.114 Sum_probs=75.2
Q ss_pred CcEEEEEeCCCCCCC-HHHHHHHHHHHhh--CCCcEEEEEcCCCCCccchhhhhhhhHHHHhc-CCCeEEecccchh---
Q 046553 33 WSVIYACLGSICGLA-TWQLLELGLGLEA--SSQPFIWVIRGGERSQGLEKWIQEEGLEERAK-GRGFIIRGWAPQV--- 105 (232)
Q Consensus 33 ~~vV~vs~GS~~~~~-~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq~--- 105 (232)
...+++..|...... .+.+...+..+.+ .+.+++++-.+.. .+. + ..+.++.. .+++.+.+|+|+.
T Consensus 192 ~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~-~~~-----l-~~~~~~~~l~~~v~~~G~~~~~~~~ 264 (398)
T cd03796 192 DKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGPK-RIL-----L-EEMREKYNLQDRVELLGAVPHERVR 264 (398)
T ss_pred CceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCch-HHH-----H-HHHHHHhCCCCeEEEeCCCCHHHHH
Confidence 446667777775422 2333333333322 3455554433221 100 1 11222222 4568888999754
Q ss_pred hhhcccCcceEEecC---Cc-hhHHHHHHhCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHH
Q 046553 106 LLLSHRAIGGFLTHC---GW-NSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLM 181 (232)
Q Consensus 106 ~lL~~~~~~~~I~hg---G~-~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl 181 (232)
.++..+++ +|.-. |. .++.||+++|+|+|+.+..+ ....+.+|.+... . .+.+++.+++.+++
T Consensus 265 ~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i~~~~~~~~-~------~~~~~l~~~l~~~l 331 (398)
T cd03796 265 DVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVLPPDMILLA-E------PDVESIVRKLEEAI 331 (398)
T ss_pred HHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhheeCCceeec-C------CCHHHHHHHHHHHH
Confidence 47888887 55422 32 49999999999999987643 2234434333222 2 35788999999999
Q ss_pred cCCh
Q 046553 182 DRGK 185 (232)
Q Consensus 182 ~d~~ 185 (232)
.+..
T Consensus 332 ~~~~ 335 (398)
T cd03796 332 SILR 335 (398)
T ss_pred hChh
Confidence 8653
No 99
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=97.12 E-value=0.037 Score=53.51 Aligned_cols=96 Identities=20% Similarity=0.212 Sum_probs=65.6
Q ss_pred CCCeEEecccchh-hhhcccCcceEEe---cCC-chhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCc
Q 046553 93 GRGFIIRGWAPQV-LLLSHRAIGGFLT---HCG-WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGL 166 (232)
Q Consensus 93 ~~nv~v~~~~pq~-~lL~~~~~~~~I~---hgG-~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~ 166 (232)
.+++.+.+|.+.. .+|..+++ ||. +-| .+++.||+++|+|+|..... .....+.+ ..|+.+..++
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV~dg~~GlLv~~~d--- 643 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAVQEGVTGLTLPADT--- 643 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHccCCCCEEEeCCCC---
Confidence 4778888998765 58888888 554 333 56899999999999998653 24555666 5677766543
Q ss_pred ccCHHHHHHHHHHHHcCChhhHHHHHHHHHHH
Q 046553 167 VIKREKVKEAIEKLMDRGKQGEKRRKRTRQLG 198 (232)
Q Consensus 167 ~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~ 198 (232)
.+.+++.+++.+++.+......+++++++..
T Consensus 644 -~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a 674 (694)
T PRK15179 644 -VTAPDVAEALARIHDMCAADPGIARKAADWA 674 (694)
T ss_pred -CChHHHHHHHHHHHhChhccHHHHHHHHHHH
Confidence 4566777777777664433336666665544
No 100
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.06 E-value=0.035 Score=50.72 Aligned_cols=178 Identities=7% Similarity=0.042 Sum_probs=100.3
Q ss_pred HHHhcCCCCCcEEEEEeCCCCCC------C----HHHHHHHHHHHhhCCCcEEEEEcCCC----CCccchhhhhhhhHHH
Q 046553 24 LKWLDSWEPWSVIYACLGSICGL------A----TWQLLELGLGLEASSQPFIWVIRGGE----RSQGLEKWIQEEGLEE 89 (232)
Q Consensus 24 ~~~l~~~~~~~vV~vs~GS~~~~------~----~~~~~~l~~~l~~~~~~~i~~~~~~~----~~~~~~~~~lp~~~~~ 89 (232)
..|+...+++++|.|+.-..... . ...+.++++.+.+.++++++..--.. ..++. . ....+.+
T Consensus 225 ~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~-~--~~~~l~~ 301 (426)
T PRK10017 225 QHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDR-M--VALNLRQ 301 (426)
T ss_pred hhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchH-H--HHHHHHH
Confidence 45665444567888876644321 1 12334456666566888776643211 01110 0 2233444
Q ss_pred HhcC-CCeEE-e-cccchh--hhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhc-cccc
Q 046553 90 RAKG-RGFII-R-GWAPQV--LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTW-GLED 162 (232)
Q Consensus 90 ~~~~-~nv~v-~-~~~pq~--~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~-~~~~ 162 (232)
.+.. .++.+ . .+-|.. .++++|++ +|..= .-+..-|+.+|+|.+.+++ | +.....+.. |..-+ .+.+
T Consensus 302 ~~~~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~R-lHa~I~a~~~gvP~i~i~Y--~-~K~~~~~~~lg~~~~~~~~~ 375 (426)
T PRK10017 302 HVSDPARYHVVMDELNDLEMGKILGACEL--TVGTR-LHSAIISMNFGTPAIAINY--E-HKSAGIMQQLGLPEMAIDIR 375 (426)
T ss_pred hcccccceeEecCCCChHHHHHHHhhCCE--EEEec-chHHHHHHHcCCCEEEeee--h-HHHHHHHHHcCCccEEechh
Confidence 4432 22332 2 233433 68888887 77643 2346668999999999997 3 333334466 76654 4555
Q ss_pred CCCcccCHHHHHHHHHHHHcCChh-hHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHh
Q 046553 163 KSGLVIKREKVKEAIEKLMDRGKQ-GEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQ 224 (232)
Q Consensus 163 ~~~~~~~~~~l~~~i~~vl~d~~~-~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~ 224 (232)
+ ++.+++.+.+.++++|.++ .+++++++.++.++.+ +-..++++.+..
T Consensus 376 ~----l~~~~Li~~v~~~~~~r~~~~~~l~~~v~~~r~~~~----------~~~~~~~~~~~~ 424 (426)
T PRK10017 376 H----LLDGSLQAMVADTLGQLPALNARLAEAVSRERQTGM----------QMVQSVLERIGE 424 (426)
T ss_pred h----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHhcc
Confidence 4 8889999999999998533 2245555555555433 345566665543
No 101
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=96.93 E-value=0.015 Score=58.23 Aligned_cols=98 Identities=12% Similarity=0.021 Sum_probs=68.3
Q ss_pred CCCeEEecccchh---hhhcccC--cceEEecC---C-chhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhccccc
Q 046553 93 GRGFIIRGWAPQV---LLLSHRA--IGGFLTHC---G-WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLED 162 (232)
Q Consensus 93 ~~nv~v~~~~pq~---~lL~~~~--~~~~I~hg---G-~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~ 162 (232)
..+|.+.+|+++. .++..++ ..+||.-. | ..++.||+++|+|+|+....+ ....+.. .-|+.++.
T Consensus 547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~g~nGlLVdP- 621 (1050)
T TIGR02468 547 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRVLDNGLLVDP- 621 (1050)
T ss_pred CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhccCCcEEEECC-
Confidence 4567777888764 3565552 12377642 2 458999999999999986533 2334444 45666655
Q ss_pred CCCcccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHH
Q 046553 163 KSGLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGEI 200 (232)
Q Consensus 163 ~~~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~ 200 (232)
-+++.+.++|.+++.|++..++|.+++.+....
T Consensus 622 -----~D~eaLA~AL~~LL~Dpelr~~m~~~gr~~v~~ 654 (1050)
T TIGR02468 622 -----HDQQAIADALLKLVADKQLWAECRQNGLKNIHL 654 (1050)
T ss_pred -----CCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 468899999999999987778888887766543
No 102
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.84 E-value=0.031 Score=47.96 Aligned_cols=127 Identities=12% Similarity=-0.066 Sum_probs=75.6
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHh--cCCCeEEecccchh---hhhcc
Q 046553 36 IYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERA--KGRGFIIRGWAPQV---LLLSH 110 (232)
Q Consensus 36 V~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~--~~~nv~v~~~~pq~---~lL~~ 110 (232)
+.+..|.... .+....+++++.+.+.++++.-.+... .. + ....... ..+++.+.+++++. .++..
T Consensus 173 ~i~~~Gr~~~--~Kg~~~li~~~~~~~~~l~i~G~~~~~-~~-----~-~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~ 243 (335)
T cd03802 173 YLLFLGRISP--EKGPHLAIRAARRAGIPLKLAGPVSDP-DY-----F-YREIAPELLDGPDIEYLGEVGGAEKAELLGN 243 (335)
T ss_pred EEEEEEeecc--ccCHHHHHHHHHhcCCeEEEEeCCCCH-HH-----H-HHHHHHhcccCCcEEEeCCCCHHHHHHHHHh
Confidence 3445566643 333455777777778786655443221 10 1 1111111 25789999999875 46778
Q ss_pred cCcceEEec--CC-chhHHHHHHhCCCeeecccccchhHHHHHHHhh-hhhcccccCCCcccCHHHHHHHHHHHHcC
Q 046553 111 RAIGGFLTH--CG-WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQA-AVTWGLEDKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 111 ~~~~~~I~h--gG-~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G-~g~~~~~~~~~~~~~~~~l~~~i~~vl~d 183 (232)
+++-++-++ -| ..++.||+++|+|+|+....+ ....+.+| .|...+ ..+++.+++.+++..
T Consensus 244 ~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~----~~e~i~~~~~g~l~~--------~~~~l~~~l~~l~~~ 308 (335)
T cd03802 244 ARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGA----VPEVVEDGVTGFLVD--------SVEELAAAVARADRL 308 (335)
T ss_pred CcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCC----chhheeCCCcEEEeC--------CHHHHHHHHHHHhcc
Confidence 887333232 23 358999999999999876532 22334443 455432 278899999888763
No 103
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=96.81 E-value=0.049 Score=48.83 Aligned_cols=170 Identities=18% Similarity=0.138 Sum_probs=96.3
Q ss_pred hhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhh-----CCCcEEEEEcCCCCCccchhhhhhhhHHHHh--cC
Q 046553 21 EQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEA-----SSQPFIWVIRGGERSQGLEKWIQEEGLEERA--KG 93 (232)
Q Consensus 21 ~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~-----~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~--~~ 93 (232)
....+.+ -.+++++|.+--||-...-...+..++++... .+.+|++...... ..+.+.+.. ..
T Consensus 173 ~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~---------~~~~i~~~~~~~~ 242 (373)
T PF02684_consen 173 AEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV---------HEELIEEILAEYP 242 (373)
T ss_pred HHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH---------HHHHHHHHHHhhC
Confidence 3444444 44578899999999876333444444554432 3557776654322 112122111 12
Q ss_pred CCeEEec-ccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecc-cccchhHHHHHHHh----hhhhcc--------
Q 046553 94 RGFIIRG-WAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRP-LFAEQFYNDKLAVQ----AAVTWG-------- 159 (232)
Q Consensus 94 ~nv~v~~-~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P-~~~DQ~~nA~~v~~----G~g~~~-------- 159 (232)
.++.+.- .-....++..+++ .+.-.|. .+.|+..+|+||+++= ...=...-|+++.+ |+.-.+
T Consensus 243 ~~~~~~~~~~~~~~~m~~ad~--al~~SGT-aTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PE 319 (373)
T PF02684_consen 243 PDVSIVIIEGESYDAMAAADA--ALAASGT-ATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPE 319 (373)
T ss_pred CCCeEEEcCCchHHHHHhCcc--hhhcCCH-HHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchh
Confidence 2333321 2234467888887 5555554 5789999999999962 23334556777766 332211
Q ss_pred -cccCCCcccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCch
Q 046553 160 -LEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASS 211 (232)
Q Consensus 160 -~~~~~~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~ 211 (232)
-.++ .+++.+..++.++|.|++..+..+...+++.+.+ ..|.++
T Consensus 320 liQ~~----~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~~~~----~~~~~~ 364 (373)
T PF02684_consen 320 LIQED----ATPENIAAELLELLENPEKRKKQKELFREIRQLL----GPGASS 364 (373)
T ss_pred hhccc----CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhh----hhccCC
Confidence 1222 8999999999999999844444444444444444 445554
No 104
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.76 E-value=0.087 Score=49.20 Aligned_cols=113 Identities=19% Similarity=0.239 Sum_probs=79.7
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHh-----cCCCeEEecccchh
Q 046553 31 EPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERA-----KGRGFIIRGWAPQV 105 (232)
Q Consensus 31 ~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-----~~~nv~v~~~~pq~ 105 (232)
++..+||+||+......++.+..-+.-+...+--++|..+++..++ ....+.... ....+++.+-.|..
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~------~~~~l~~la~~~Gv~~eRL~f~p~~~~~ 500 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAE------INARLRDLAEREGVDSERLRFLPPAPNE 500 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHH------HHHHHHHHHHHcCCChhheeecCCCCCH
Confidence 4567999999999998899888888888888888999888753322 223333322 34566666655533
Q ss_pred ---hhhcccCcceEEe---cCCchhHHHHHHhCCCeeecccccchhH--HHHHHHh
Q 046553 106 ---LLLSHRAIGGFLT---HCGWNSTLEGVSAGVPLVTRPLFAEQFY--NDKLAVQ 153 (232)
Q Consensus 106 ---~lL~~~~~~~~I~---hgG~~sv~eal~~GvP~i~~P~~~DQ~~--nA~~v~~ 153 (232)
.-+.-+++ |+. .||..|..|++..|||++..+ ++||. |+..+..
T Consensus 501 ~h~a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~ 552 (620)
T COG3914 501 DHRARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIAT 552 (620)
T ss_pred HHHHhhchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHH
Confidence 44555665 664 699999999999999999986 77765 3444433
No 105
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.76 E-value=0.01 Score=52.17 Aligned_cols=95 Identities=14% Similarity=0.161 Sum_probs=68.5
Q ss_pred CCCeEEecccchhhh---hcccCcceEEecC-------------CchhHHHHHHhCCCeeecccccchhHHHHHHHh-hh
Q 046553 93 GRGFIIRGWAPQVLL---LSHRAIGGFLTHC-------------GWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AA 155 (232)
Q Consensus 93 ~~nv~v~~~~pq~~l---L~~~~~~~~I~hg-------------G~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~ 155 (232)
.+|+.+.+|+|+..+ |.. +.+++...- -.+-+.+++++|+|+|+.+ ....+..+++ +.
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V~~~~~ 280 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFIVENGL 280 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHHHhCCc
Confidence 468999999998654 333 433332211 1223778899999999965 3567788888 89
Q ss_pred hhcccccCCCcccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHH
Q 046553 156 VTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGEIAN 202 (232)
Q Consensus 156 g~~~~~~~~~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~~ 202 (232)
|+..+ +.+++.+.+..+. +++.++|++|+++++++++
T Consensus 281 G~~v~--------~~~el~~~l~~~~--~~~~~~m~~n~~~~~~~~~ 317 (333)
T PRK09814 281 GFVVD--------SLEELPEIIDNIT--EEEYQEMVENVKKISKLLR 317 (333)
T ss_pred eEEeC--------CHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHh
Confidence 98765 2457888888753 3667789999999999998
No 106
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=96.59 E-value=0.048 Score=49.93 Aligned_cols=132 Identities=13% Similarity=0.049 Sum_probs=71.9
Q ss_pred EEEEEeCCCCCCC-HHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhc--CCCeEEecccchh---hhh
Q 046553 35 VIYACLGSICGLA-TWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAK--GRGFIIRGWAPQV---LLL 108 (232)
Q Consensus 35 vV~vs~GS~~~~~-~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~--~~nv~v~~~~pq~---~lL 108 (232)
.+++..|...... .+.+...+..+.+.+.++++.-.++.. +.+.+.+... ..++.+....++. .++
T Consensus 297 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 368 (476)
T cd03791 297 PLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPE--------YEEALRELAARYPGRVAVLIGYDEALAHLIY 368 (476)
T ss_pred CEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHH--------HHHHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Confidence 4455667776432 333344444444445666655433211 2222322221 4566644333332 467
Q ss_pred cccCcceEEec----CCchhHHHHHHhCCCeeeccccc--chhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHHH
Q 046553 109 SHRAIGGFLTH----CGWNSTLEGVSAGVPLVTRPLFA--EQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKLM 181 (232)
Q Consensus 109 ~~~~~~~~I~h----gG~~sv~eal~~GvP~i~~P~~~--DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~vl 181 (232)
..+++ ++.- +-..+.+||+++|+|.|+....+ |...+...-.. |.|..... -+.+++.+++.+++
T Consensus 369 ~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~------~~~~~l~~~i~~~l 440 (476)
T cd03791 369 AGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEG------YNADALLAALRRAL 440 (476)
T ss_pred HhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCC------CCHHHHHHHHHHHH
Confidence 77787 6643 11247899999999999876532 22211111112 47777665 46889999999988
Q ss_pred c
Q 046553 182 D 182 (232)
Q Consensus 182 ~ 182 (232)
.
T Consensus 441 ~ 441 (476)
T cd03791 441 A 441 (476)
T ss_pred H
Confidence 6
No 107
>PRK14098 glycogen synthase; Provisional
Probab=96.57 E-value=0.14 Score=47.53 Aligned_cols=129 Identities=10% Similarity=-0.016 Sum_probs=72.8
Q ss_pred EEEEEeCCCCCCC-HHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHh--cCCCeEEecccchh---hhh
Q 046553 35 VIYACLGSICGLA-TWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERA--KGRGFIIRGWAPQV---LLL 108 (232)
Q Consensus 35 vV~vs~GS~~~~~-~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~--~~~nv~v~~~~pq~---~lL 108 (232)
.++...|...... .+.+...+..+.+.+.++++.-.++.. ..+.+.+.. .+.++.+.++++.. .++
T Consensus 308 ~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~--------~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~ 379 (489)
T PRK14098 308 PLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKE--------YEKRFQDFAEEHPEQVSVQTEFTDAFFHLAI 379 (489)
T ss_pred CEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHH--------HHHHHHHHHHHCCCCEEEEEecCHHHHHHHH
Confidence 3445566666532 333333334444446676655433211 112232221 24678887777763 578
Q ss_pred cccCcceEEecCC----chhHHHHHHhCCCeeeccccc--chhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHHH
Q 046553 109 SHRAIGGFLTHCG----WNSTLEGVSAGVPLVTRPLFA--EQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKLM 181 (232)
Q Consensus 109 ~~~~~~~~I~hgG----~~sv~eal~~GvP~i~~P~~~--DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~vl 181 (232)
+.+++ |+.-.= ..+.+||+++|+|.|+....+ |...+ ...+ +.|..... .+++.+.++|.+++
T Consensus 380 a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~~~~G~l~~~------~d~~~la~ai~~~l 449 (489)
T PRK14098 380 AGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSEDKGSGFIFHD------YTPEALVAKLGEAL 449 (489)
T ss_pred HhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCCCCceeEeCC------CCHHHHHHHHHHHH
Confidence 88888 664321 237789999999988876532 22111 1123 56666554 46889999999875
No 108
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=96.37 E-value=0.17 Score=46.48 Aligned_cols=144 Identities=13% Similarity=0.037 Sum_probs=77.7
Q ss_pred EEEEEeCCCCCCC-HHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHh--cCCCeEEecccchh---hhh
Q 046553 35 VIYACLGSICGLA-TWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERA--KGRGFIIRGWAPQV---LLL 108 (232)
Q Consensus 35 vV~vs~GS~~~~~-~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~--~~~nv~v~~~~pq~---~lL 108 (232)
.+++..|...... .+.+.+.+..+.+.+.++++.-.++ .. +.+.+.+.. .+.++.+....+.. .++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~-~~-------~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~ 363 (473)
T TIGR02095 292 PLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGD-PE-------LEEALRELAERYPGNVRVIIGYDEALAHLIY 363 (473)
T ss_pred CEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCC-HH-------HHHHHHHHHHHCCCcEEEEEcCCHHHHHHHH
Confidence 4455567776532 3334444444444456766554332 11 222232211 23456555444443 477
Q ss_pred cccCcceEEecC---Cc-hhHHHHHHhCCCeeeccccc--chhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHHH
Q 046553 109 SHRAIGGFLTHC---GW-NSTLEGVSAGVPLVTRPLFA--EQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKLM 181 (232)
Q Consensus 109 ~~~~~~~~I~hg---G~-~sv~eal~~GvP~i~~P~~~--DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~vl 181 (232)
..+++ ++.-. |. .+..||+++|+|.|+....+ |...+...-.. +.|+.... -+++++.++|.+++
T Consensus 364 ~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~------~d~~~la~~i~~~l 435 (473)
T TIGR02095 364 AGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEE------YDPGALLAALSRAL 435 (473)
T ss_pred HhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCC------CCHHHHHHHHHHHH
Confidence 78887 66432 22 37889999999999876532 22211110022 45665554 46889999999988
Q ss_pred c----CChhhHHHHHHH
Q 046553 182 D----RGKQGEKRRKRT 194 (232)
Q Consensus 182 ~----d~~~~~~~~~~a 194 (232)
. |++..+++.+++
T Consensus 436 ~~~~~~~~~~~~~~~~~ 452 (473)
T TIGR02095 436 RLYRQDPSLWEALQKNA 452 (473)
T ss_pred HHHhcCHHHHHHHHHHH
Confidence 7 554444444443
No 109
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=96.36 E-value=0.15 Score=48.09 Aligned_cols=63 Identities=17% Similarity=0.188 Sum_probs=45.8
Q ss_pred CCCeEEecccchh-hhhcccCcceEEec---CC-chhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccc
Q 046553 93 GRGFIIRGWAPQV-LLLSHRAIGGFLTH---CG-WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLE 161 (232)
Q Consensus 93 ~~nv~v~~~~pq~-~lL~~~~~~~~I~h---gG-~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~ 161 (232)
.+++.+.+|.++. .+|..+++ ||.. -| .+++.||+++|+|+|+.... -+...+.+ ..|...+.
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV~dG~nG~LVp~ 522 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECFIEGVSGFILDD 522 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHcccCCcEEEECC
Confidence 4788888887654 57888888 7753 23 56999999999999987653 34566666 66766655
No 110
>PRK00654 glgA glycogen synthase; Provisional
Probab=96.31 E-value=0.06 Score=49.51 Aligned_cols=144 Identities=12% Similarity=0.040 Sum_probs=74.7
Q ss_pred HHHHhcCCCCCcEEEEEeCCCCCCC-HHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHh--cCCCeE-E
Q 046553 23 CLKWLDSWEPWSVIYACLGSICGLA-TWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERA--KGRGFI-I 98 (232)
Q Consensus 23 l~~~l~~~~~~~vV~vs~GS~~~~~-~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~--~~~nv~-v 98 (232)
+++.+...++...+++..|...... .+.+.+.+..+.+.+.++++.-.++.. +.+.+.+.. .+.++. +
T Consensus 271 l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~--------~~~~l~~l~~~~~~~v~~~ 342 (466)
T PRK00654 271 LQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPE--------LEEAFRALAARYPGKVGVQ 342 (466)
T ss_pred HHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHH--------HHHHHHHHHHHCCCcEEEE
Confidence 4444443322334555667766422 333333333333346777766432210 112222211 134444 3
Q ss_pred ecccchh--hhhcccCcceEEec---CCc-hhHHHHHHhCCCeeeccccc--chhHHHHHHHh-hhhhcccccCCCcccC
Q 046553 99 RGWAPQV--LLLSHRAIGGFLTH---CGW-NSTLEGVSAGVPLVTRPLFA--EQFYNDKLAVQ-AAVTWGLEDKSGLVIK 169 (232)
Q Consensus 99 ~~~~pq~--~lL~~~~~~~~I~h---gG~-~sv~eal~~GvP~i~~P~~~--DQ~~nA~~v~~-G~g~~~~~~~~~~~~~ 169 (232)
.+|-... .++..+++ +|.- -|. .+..||+++|+|.|+....+ |...+...-.. +.|+.... -+
T Consensus 343 ~g~~~~~~~~~~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~------~d 414 (466)
T PRK00654 343 IGYDEALAHRIYAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDD------FN 414 (466)
T ss_pred EeCCHHHHHHHHhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCC------CC
Confidence 4553332 46788887 6643 133 48899999999999875432 32211111123 55666655 36
Q ss_pred HHHHHHHHHHHHc
Q 046553 170 REKVKEAIEKLMD 182 (232)
Q Consensus 170 ~~~l~~~i~~vl~ 182 (232)
++++.++|.+++.
T Consensus 415 ~~~la~~i~~~l~ 427 (466)
T PRK00654 415 AEDLLRALRRALE 427 (466)
T ss_pred HHHHHHHHHHHHH
Confidence 8899999999876
No 111
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=96.26 E-value=0.079 Score=47.30 Aligned_cols=142 Identities=20% Similarity=0.186 Sum_probs=82.9
Q ss_pred hHHHHhcCCCCCcEEEEEeCCCC--C-CCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhc-CCCeE
Q 046553 22 QCLKWLDSWEPWSVIYACLGSIC--G-LATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAK-GRGFI 97 (232)
Q Consensus 22 ~l~~~l~~~~~~~vV~vs~GS~~--~-~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~ 97 (232)
.+.+.+.-.++++.|+|++=... . ...+.+..+++++...+.++++......+.+. . +.+.+.+... .+++.
T Consensus 190 ~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p~~~--~--i~~~i~~~~~~~~~v~ 265 (365)
T TIGR03568 190 ELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADAGSR--I--INEAIEEYVNEHPNFR 265 (365)
T ss_pred HHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCCCch--H--HHHHHHHHhcCCCCEE
Confidence 33344433324578888875443 2 34677888999998777666665533221110 0 1122222222 46788
Q ss_pred Eecccch---hhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHH
Q 046553 98 IRGWAPQ---VLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVK 174 (232)
Q Consensus 98 v~~~~pq---~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~ 174 (232)
+.+.++. ..++.++++ +|+-++.+- .||.++|+|+|.+= +-+ .-++.|..+..-. .+++.|.
T Consensus 266 l~~~l~~~~~l~Ll~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R~---e~~~~g~nvl~vg------~~~~~I~ 330 (365)
T TIGR03568 266 LFKSLGQERYLSLLKNADA--VIGNSSSGI-IEAPSFGVPTINIG---TRQ---KGRLRADSVIDVD------PDKEEIV 330 (365)
T ss_pred EECCCChHHHHHHHHhCCE--EEEcChhHH-HhhhhcCCCEEeec---CCc---hhhhhcCeEEEeC------CCHHHHH
Confidence 8765554 468888888 998875554 99999999999762 211 1111132222112 4688999
Q ss_pred HHHHHHHc
Q 046553 175 EAIEKLMD 182 (232)
Q Consensus 175 ~~i~~vl~ 182 (232)
+++.+++.
T Consensus 331 ~a~~~~~~ 338 (365)
T TIGR03568 331 KAIEKLLD 338 (365)
T ss_pred HHHHHHhC
Confidence 99999554
No 112
>PLN02275 transferase, transferring glycosyl groups
Probab=96.24 E-value=0.048 Score=48.53 Aligned_cols=74 Identities=16% Similarity=0.239 Sum_probs=50.9
Q ss_pred CCeEEec-ccchh---hhhcccCcceEEe-c---CC---chhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccc
Q 046553 94 RGFIIRG-WAPQV---LLLSHRAIGGFLT-H---CG---WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLE 161 (232)
Q Consensus 94 ~nv~v~~-~~pq~---~lL~~~~~~~~I~-h---gG---~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~ 161 (232)
+|+.+.+ |+|.. .+|+.+++ +|. + .| .+++.||+++|+|+|..... .+...+++ +.|....
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv~~g~~G~lv~- 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELVKDGKNGLLFS- 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHccCCCCeEEEC-
Confidence 5566544 78764 46888998 663 1 12 35799999999999997542 25666777 6777653
Q ss_pred cCCCcccCHHHHHHHHHHHH
Q 046553 162 DKSGLVIKREKVKEAIEKLM 181 (232)
Q Consensus 162 ~~~~~~~~~~~l~~~i~~vl 181 (232)
+.+++.++|.++|
T Consensus 359 -------~~~~la~~i~~l~ 371 (371)
T PLN02275 359 -------SSSELADQLLELL 371 (371)
T ss_pred -------CHHHHHHHHHHhC
Confidence 2677888887764
No 113
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=96.15 E-value=0.1 Score=49.27 Aligned_cols=150 Identities=17% Similarity=0.166 Sum_probs=90.3
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHH---H--hcCCCeEEecccc--
Q 046553 31 EPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEE---R--AKGRGFIIRGWAP-- 103 (232)
Q Consensus 31 ~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~---~--~~~~nv~v~~~~p-- 103 (232)
++..+||.+|--....++..+...+.-|.+.+--++|..+.+..-+ ..|.. . ..++.+.+.+-++
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge--------~rf~ty~~~~Gl~p~riifs~va~k~ 827 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE--------QRFRTYAEQLGLEPDRIIFSPVAAKE 827 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch--------HHHHHHHHHhCCCccceeeccccchH
Confidence 3456899998888888888888888888888999999998765321 12221 1 1245555443332
Q ss_pred -hh--hhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHH-HHHHh-hhhhcccccCCCcccCHHHHHHHHH
Q 046553 104 -QV--LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYND-KLAVQ-AAVTWGLEDKSGLVIKREKVKEAIE 178 (232)
Q Consensus 104 -q~--~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA-~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~ 178 (232)
+. ..|..-.+.-+.+. |..|..+.++.|||||.+|.-.--..-| ..+.. |+|-.+-. +.++-...--
T Consensus 828 eHvrr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak-------~~eEY~~iaV 899 (966)
T KOG4626|consen 828 EHVRRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAK-------NREEYVQIAV 899 (966)
T ss_pred HHHHhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhh-------hHHHHHHHHH
Confidence 11 22333233335665 5889999999999999999743333333 23344 77764433 3455444444
Q ss_pred HHHcCChhhHHHHHHHHH
Q 046553 179 KLMDRGKQGEKRRKRTRQ 196 (232)
Q Consensus 179 ~vl~d~~~~~~~~~~a~~ 196 (232)
++-.|.+..+++|...++
T Consensus 900 ~Latd~~~L~~lr~~l~~ 917 (966)
T KOG4626|consen 900 RLATDKEYLKKLRAKLRK 917 (966)
T ss_pred HhhcCHHHHHHHHHHHHH
Confidence 555555555555544433
No 114
>PLN02949 transferase, transferring glycosyl groups
Probab=96.11 E-value=0.14 Score=47.21 Aligned_cols=95 Identities=12% Similarity=0.025 Sum_probs=60.7
Q ss_pred CCCeEEecccchh---hhhcccCcceEEec---CCc-hhHHHHHHhCCCeeecccccchhHHHHHHHh---h-hhhcccc
Q 046553 93 GRGFIIRGWAPQV---LLLSHRAIGGFLTH---CGW-NSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ---A-AVTWGLE 161 (232)
Q Consensus 93 ~~nv~v~~~~pq~---~lL~~~~~~~~I~h---gG~-~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~---G-~g~~~~~ 161 (232)
.+++.+.+++|+. .+|..+++ +|+- =|. .++.||+++|+|.|+....+- ....+.. | .|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp---~~eIV~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGP---KMDIVLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCC---cceeeecCCCCcccccC--
Confidence 4678888998754 47778877 6631 222 379999999999999865431 0001111 1 22221
Q ss_pred cCCCcccCHHHHHHHHHHHHcC-ChhhHHHHHHHHHHHHH
Q 046553 162 DKSGLVIKREKVKEAIEKLMDR-GKQGEKRRKRTRQLGEI 200 (232)
Q Consensus 162 ~~~~~~~~~~~l~~~i~~vl~d-~~~~~~~~~~a~~l~~~ 200 (232)
-+.+++.++|.+++.+ ++..++|.+++++..+.
T Consensus 407 ------~~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~ 440 (463)
T PLN02949 407 ------TTVEEYADAILEVLRMRETERLEIAAAARKRANR 440 (463)
T ss_pred ------CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 2578999999999984 45556677777665443
No 115
>PHA01633 putative glycosyl transferase group 1
Probab=96.11 E-value=0.4 Score=42.44 Aligned_cols=83 Identities=12% Similarity=0.054 Sum_probs=53.8
Q ss_pred CCCeEEe---cccchh---hhhcccCcceEEecC---C-chhHHHHHHhCCCeeeccc------ccch------hHHHHH
Q 046553 93 GRGFIIR---GWAPQV---LLLSHRAIGGFLTHC---G-WNSTLEGVSAGVPLVTRPL------FAEQ------FYNDKL 150 (232)
Q Consensus 93 ~~nv~v~---~~~pq~---~lL~~~~~~~~I~hg---G-~~sv~eal~~GvP~i~~P~------~~DQ------~~nA~~ 150 (232)
..++.+. +++++. .++..+++ ||.-. | ..++.||+++|+|+|.--. .+++ ..+...
T Consensus 200 ~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~ 277 (335)
T PHA01633 200 PANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEE 277 (335)
T ss_pred CCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHH
Confidence 4577776 444543 57788887 76532 3 4578999999999998532 2332 233333
Q ss_pred HHh---hhhhcccccCCCcccCHHHHHHHHHHHHcC
Q 046553 151 AVQ---AAVTWGLEDKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 151 v~~---G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d 183 (232)
..+ |.|...+. .+++++..+|..++..
T Consensus 278 ~~~~~~g~g~~~~~------~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 278 YYDKEHGQKWKIHK------FQIEDMANAIILAFEL 307 (335)
T ss_pred hcCcccCceeeecC------CCHHHHHHHHHHHHhc
Confidence 332 55655544 6899999999998654
No 116
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=95.88 E-value=0.3 Score=43.42 Aligned_cols=79 Identities=19% Similarity=0.088 Sum_probs=52.2
Q ss_pred CCCeEEecccchh---hhhcccCcceEEe------cCC-chhHHHHHHhCCCeeecccccchhHHHHHHHhhhhhccccc
Q 046553 93 GRGFIIRGWAPQV---LLLSHRAIGGFLT------HCG-WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLED 162 (232)
Q Consensus 93 ~~nv~v~~~~pq~---~lL~~~~~~~~I~------hgG-~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~ 162 (232)
.+|+.+.+++|+. .++.++++.++-. .++ .+.+.|++++|+|+|..++ ...++.+.+.....
T Consensus 253 ~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~~~~~~~~~~~- 324 (373)
T cd04950 253 LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVRRYEDEVVLIA- 324 (373)
T ss_pred CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHHhhcCcEEEeC-
Confidence 5799999999864 4788888833321 222 3468999999999998864 22223321222222
Q ss_pred CCCcccCHHHHHHHHHHHHcCC
Q 046553 163 KSGLVIKREKVKEAIEKLMDRG 184 (232)
Q Consensus 163 ~~~~~~~~~~l~~~i~~vl~d~ 184 (232)
-+.+++.++|.+++.++
T Consensus 325 -----~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 325 -----DDPEEFVAAIEKALLED 341 (373)
T ss_pred -----CCHHHHHHHHHHHHhcC
Confidence 26899999999977643
No 117
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=95.85 E-value=0.44 Score=45.25 Aligned_cols=167 Identities=16% Similarity=0.088 Sum_probs=96.4
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHh--h--CCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCC
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLE--A--SSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGR 94 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~--~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 94 (232)
+.++..+-+...+++++|-+--||-...=...+..++++.. . ...+|++...... ..+.+.+.....
T Consensus 399 ~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~~l~fvvp~a~~~---------~~~~i~~~~~~~ 469 (608)
T PRK01021 399 PNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTHQLLVSSANPK---------YDHLILEVLQQE 469 (608)
T ss_pred CHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhccCeEEEEecCchh---------hHHHHHHHHhhc
Confidence 34455566665567789999999987643455555666665 3 2456665433221 112222222221
Q ss_pred C---eEEecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeeccc-ccchhHHHHHHHh------hhh-----h--
Q 046553 95 G---FIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPL-FAEQFYNDKLAVQ------AAV-----T-- 157 (232)
Q Consensus 95 n---v~v~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~-~~DQ~~nA~~v~~------G~g-----~-- 157 (232)
+ +.+..--....++..|++ .+.-+|. .+.|++..|+||+++=- ..=-..-|+++.+ |+- .
T Consensus 470 ~~~~~~ii~~~~~~~~m~aaD~--aLaaSGT-aTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~V 546 (608)
T PRK01021 470 GCLHSHIVPSQFRYELMRECDC--ALAKCGT-IVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTI 546 (608)
T ss_pred CCCCeEEecCcchHHHHHhcCe--eeecCCH-HHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCc
Confidence 2 222210012468888888 7777765 56799999999999632 1111223333321 211 1
Q ss_pred ---ccc-ccCCCcccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHH
Q 046553 158 ---WGL-EDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGEIAN 202 (232)
Q Consensus 158 ---~~~-~~~~~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~~ 202 (232)
.+. .+ ..+++++.+++ ++|.|++..+++++..+++.+.+.
T Consensus 547 vPEllqgQ~----~~tpe~La~~l-~lL~d~~~r~~~~~~l~~lr~~Lg 590 (608)
T PRK01021 547 FPEFIGGKK----DFQPEEVAAAL-DILKTSQSKEKQKDACRDLYQAMN 590 (608)
T ss_pred chhhcCCcc----cCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhc
Confidence 111 12 38999999997 888888777788888888877774
No 118
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=95.59 E-value=0.68 Score=40.95 Aligned_cols=138 Identities=19% Similarity=0.123 Sum_probs=82.3
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCCC----CCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCC
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSICG----LATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGR 94 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~~----~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 94 (232)
.|++..+-+... +.+.|++=+-+..+ .....+..+++.+.+.+..++...+.... ++ +.+ .-
T Consensus 166 Pd~~vl~~lg~~-~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~~---------~~-~~~---~~ 231 (335)
T PF04007_consen 166 PDPEVLKELGLD-DEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYEDQ---------RE-LFE---KY 231 (335)
T ss_pred CChhHHHHcCCC-CCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcch---------hh-HHh---cc
Confidence 466667777744 56788777766554 22444667888888877665555443321 11 111 11
Q ss_pred CeEE-ecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHH
Q 046553 95 GFII-RGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREK 172 (232)
Q Consensus 95 nv~v-~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~ 172 (232)
++.+ ..-++...+|.++++ +|+-|| ....||...|+|.|-+ +.++-...-+.+.+ |+ +. .. -+.++
T Consensus 232 ~~~i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~Gl-l~-~~------~~~~e 299 (335)
T PF04007_consen 232 GVIIPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEKGL-LY-HS------TDPDE 299 (335)
T ss_pred CccccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHCCC-eE-ec------CCHHH
Confidence 2222 233444579999998 998766 6788999999999975 22232233455666 76 22 22 35667
Q ss_pred HHHHHHHHHc
Q 046553 173 VKEAIEKLMD 182 (232)
Q Consensus 173 l~~~i~~vl~ 182 (232)
+.+.+.+.+.
T Consensus 300 i~~~v~~~~~ 309 (335)
T PF04007_consen 300 IVEYVRKNLG 309 (335)
T ss_pred HHHHHHHhhh
Confidence 7766655443
No 119
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=95.48 E-value=0.55 Score=41.99 Aligned_cols=180 Identities=17% Similarity=0.125 Sum_probs=106.0
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhh-----CCCcEEEEEcCCCCCccchhhhhhhhHHHHh-c
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEA-----SSQPFIWVIRGGERSQGLEKWIQEEGLEERA-K 92 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~-----~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~ 92 (232)
+.+.+.+-+....+++++.+.-||-...-...+..+.++..+ .+.+|+.-+..... +.+.... .
T Consensus 174 ~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~~----------~~~~~~~~~ 243 (381)
T COG0763 174 DREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAKY----------RRIIEEALK 243 (381)
T ss_pred cHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHHH----------HHHHHHHhh
Confidence 455677777766788899999999886323334444444433 35677776543321 1111111 1
Q ss_pred CCC--eEEecccch--hhhhcccCcceEEecCCchhHHHHHHhCCCeeeccc-ccchhHHHHHHHh--hhhh--------
Q 046553 93 GRG--FIIRGWAPQ--VLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPL-FAEQFYNDKLAVQ--AAVT-------- 157 (232)
Q Consensus 93 ~~n--v~v~~~~pq--~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~-~~DQ~~nA~~v~~--G~g~-------- 157 (232)
... .... -.++ ...+..|++ .+.-+|. .+.|++.+|+|||+.=- ..=-+.-|+++.. -+++
T Consensus 244 ~~~~~~~~~-~~~~~~~~a~~~aD~--al~aSGT-~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ 319 (381)
T COG0763 244 WEVAGLSLI-LIDGEKRKAFAAADA--ALAASGT-ATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGRE 319 (381)
T ss_pred ccccCceEE-ecCchHHHHHHHhhH--HHHhccH-HHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCc
Confidence 111 1111 1222 247778887 6666665 46799999999998521 1122345555555 2221
Q ss_pred ----cccccCCCcccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHH
Q 046553 158 ----WGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEF 221 (232)
Q Consensus 158 ----~~~~~~~~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~ 221 (232)
.+. + .++++.|.+++..++.|+.+.+.+++....|...++ .++++...+..+++.
T Consensus 320 ivPEliq-~----~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~----~~~~~e~aA~~vl~~ 378 (381)
T COG0763 320 IVPELIQ-E----DCTPENLARALEELLLNGDRREALKEKFRELHQYLR----EDPASEIAAQAVLEL 378 (381)
T ss_pred cchHHHh-h----hcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHc----CCcHHHHHHHHHHHH
Confidence 111 2 278999999999999998777788888888888876 233444444444443
No 120
>PLN02316 synthase/transferase
Probab=95.38 E-value=1.1 Score=45.43 Aligned_cols=82 Identities=11% Similarity=-0.038 Sum_probs=50.7
Q ss_pred CCeEEecccchh---hhhcccCcceEEecC----CchhHHHHHHhCCCeeeccccc--chhHHH----HHHHh----hhh
Q 046553 94 RGFIIRGWAPQV---LLLSHRAIGGFLTHC----GWNSTLEGVSAGVPLVTRPLFA--EQFYND----KLAVQ----AAV 156 (232)
Q Consensus 94 ~nv~v~~~~pq~---~lL~~~~~~~~I~hg----G~~sv~eal~~GvP~i~~P~~~--DQ~~nA----~~v~~----G~g 156 (232)
.++.+....+.. .++..+++ |+.-. =..+.+||+++|+|.|+....+ |..... ...+. +-|
T Consensus 900 ~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tG 977 (1036)
T PLN02316 900 DRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNG 977 (1036)
T ss_pred CeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCce
Confidence 456555444543 57888887 77432 1458999999999988865532 322211 00011 345
Q ss_pred hcccccCCCcccCHHHHHHHHHHHHcC
Q 046553 157 TWGLEDKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~~i~~vl~d 183 (232)
+.... .+++.+..+|.+++.+
T Consensus 978 flf~~------~d~~aLa~AL~raL~~ 998 (1036)
T PLN02316 978 FSFDG------ADAAGVDYALNRAISA 998 (1036)
T ss_pred EEeCC------CCHHHHHHHHHHHHhh
Confidence 55554 4688999999999874
No 121
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=95.24 E-value=0.13 Score=35.93 Aligned_cols=69 Identities=14% Similarity=0.125 Sum_probs=47.0
Q ss_pred cCCchhHHHHHHhCCCeeecccccchhHHHHHHHhh-hhhcccccCCCcccCHHHHHHHHHHHHcCChhhHHHHHHHHHH
Q 046553 119 HCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQA-AVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQL 197 (232)
Q Consensus 119 hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G-~g~~~~~~~~~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l 197 (232)
++-...+.|++++|+|+|.-+. ......+..| -++.. -+.+++...|..+++|++..+++.+++.+.
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~~~~~~~~~~--------~~~~el~~~i~~ll~~~~~~~~ia~~a~~~ 76 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIFEDGEHIITY--------NDPEELAEKIEYLLENPEERRRIAKNARER 76 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHcCCCCeEEEE--------CCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 4445689999999999999864 2233333233 22222 258999999999999997777777666554
Q ss_pred HH
Q 046553 198 GE 199 (232)
Q Consensus 198 ~~ 199 (232)
-.
T Consensus 77 v~ 78 (92)
T PF13524_consen 77 VL 78 (92)
T ss_pred HH
Confidence 43
No 122
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=95.22 E-value=0.16 Score=46.11 Aligned_cols=95 Identities=19% Similarity=0.053 Sum_probs=60.0
Q ss_pred CCCeEEecccchh---hhhcccCcceEEecC---C-chhHHHHHHhCCCeeecccccchhHHHHHHH---h-hhhhcccc
Q 046553 93 GRGFIIRGWAPQV---LLLSHRAIGGFLTHC---G-WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAV---Q-AAVTWGLE 161 (232)
Q Consensus 93 ~~nv~v~~~~pq~---~lL~~~~~~~~I~hg---G-~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~---~-G~g~~~~~ 161 (232)
.+++.+.+++|+. .+|..+++ +|+-. | ..++.||+++|+|.|+.-..+. ....+. . ..|...
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp---~~~iv~~~~~g~~G~l~-- 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFGIGVVEYMAAGLIPLAHASGGP---LLDIVVPWDGGPTGFLA-- 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcccHHHHHHHcCCcEEEEcCCCC---chheeeccCCCCceEEe--
Confidence 4688888998864 47888887 55421 1 3488999999999998654321 112233 3 455542
Q ss_pred cCCCcccCHHHHHHHHHHHHcCChhh-HHHHHHHHHHHHH
Q 046553 162 DKSGLVIKREKVKEAIEKLMDRGKQG-EKRRKRTRQLGEI 200 (232)
Q Consensus 162 ~~~~~~~~~~~l~~~i~~vl~d~~~~-~~~~~~a~~l~~~ 200 (232)
-+++++.++|.++++++++. +.+++++++..+.
T Consensus 377 ------~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~ 410 (419)
T cd03806 377 ------STAEEYAEAIEKILSLSEEERLRIRRAARSSVKR 410 (419)
T ss_pred ------CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 25889999999999976332 2344444443333
No 123
>PLN00142 sucrose synthase
Probab=94.62 E-value=1.2 Score=43.84 Aligned_cols=72 Identities=11% Similarity=0.028 Sum_probs=49.6
Q ss_pred EEec---CC-chhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHH----HHcCChh
Q 046553 116 FLTH---CG-WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEK----LMDRGKQ 186 (232)
Q Consensus 116 ~I~h---gG-~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~----vl~d~~~ 186 (232)
||.- =| ..++.||+++|+|+|+....+ ....+++ ..|..++. -+++++.++|.+ ++.|++.
T Consensus 670 fVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV~dG~tG~LV~P------~D~eaLA~aI~~lLekLl~Dp~l 739 (815)
T PLN00142 670 FVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEIIVDGVSGFHIDP------YHGDEAANKIADFFEKCKEDPSY 739 (815)
T ss_pred EEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcCCCcEEEeCC------CCHHHHHHHHHHHHHHhcCCHHH
Confidence 6653 23 348999999999999976543 4556666 56777765 357777777765 4568877
Q ss_pred hHHHHHHHHHH
Q 046553 187 GEKRRKRTRQL 197 (232)
Q Consensus 187 ~~~~~~~a~~l 197 (232)
.++|.+++.+.
T Consensus 740 r~~mg~~Ar~r 750 (815)
T PLN00142 740 WNKISDAGLQR 750 (815)
T ss_pred HHHHHHHHHHH
Confidence 77777776553
No 124
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=94.56 E-value=0.27 Score=42.60 Aligned_cols=137 Identities=16% Similarity=0.066 Sum_probs=79.7
Q ss_pred HHHhcCCCCCcEEEEEeCCCCC---CCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEec
Q 046553 24 LKWLDSWEPWSVIYACLGSICG---LATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRG 100 (232)
Q Consensus 24 ~~~l~~~~~~~vV~vs~GS~~~---~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~ 100 (232)
..++....+++.|.+.-|+... ++.+.+.++++.+.+.++++++..+++.... ..+.+.+... +..+.+
T Consensus 170 ~~~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~~------~~~~i~~~~~--~~~l~g 241 (319)
T TIGR02193 170 VAFLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAEKQ------RAERIAEALP--GAVVLP 241 (319)
T ss_pred hhhhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHH------HHHHHHhhCC--CCeecC
Confidence 4455443346666666665444 5678888999998766788776655432110 1223332222 222333
Q ss_pred --ccchh-hhhcccCcceEEecCCchhHHHHHHhCCCeeec--ccccchhHHHHHHHh-hhh---hcc-cccCCCcccCH
Q 046553 101 --WAPQV-LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTR--PLFAEQFYNDKLAVQ-AAV---TWG-LEDKSGLVIKR 170 (232)
Q Consensus 101 --~~pq~-~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~--P~~~DQ~~nA~~v~~-G~g---~~~-~~~~~~~~~~~ 170 (232)
-+++. .++.+|++ +|+. ..|.++=|.+.|+|+|.+ |....+ ..= |-. +.. ..+ .+++
T Consensus 242 ~~sL~el~ali~~a~l--~I~~-DSgp~HlAaa~g~P~i~lfg~t~p~~------~~P~~~~~~~~~~~~~~----~I~~ 308 (319)
T TIGR02193 242 KMSLAEVAALLAGADA--VVGV-DTGLTHLAAALDKPTVTLYGATDPGR------TGGYGKPNVALLGESGA----NPTP 308 (319)
T ss_pred CCCHHHHHHHHHcCCE--EEeC-CChHHHHHHHcCCCEEEEECCCCHhh------cccCCCCceEEccCccC----CCCH
Confidence 23443 68888998 8886 478899999999999986 221111 000 111 000 122 3899
Q ss_pred HHHHHHHHHHH
Q 046553 171 EKVKEAIEKLM 181 (232)
Q Consensus 171 ~~l~~~i~~vl 181 (232)
+++.++++++|
T Consensus 309 ~~V~~ai~~~~ 319 (319)
T TIGR02193 309 DEVLAALEELL 319 (319)
T ss_pred HHHHHHHHhhC
Confidence 99999988764
No 125
>PLN02939 transferase, transferring glycosyl groups
Probab=94.45 E-value=2.1 Score=42.99 Aligned_cols=93 Identities=9% Similarity=0.076 Sum_probs=58.1
Q ss_pred CCCeEEecccchh---hhhcccCcceEEecC----CchhHHHHHHhCCCeeeccccc--chhHH--HHHH-Hh-hhhhcc
Q 046553 93 GRGFIIRGWAPQV---LLLSHRAIGGFLTHC----GWNSTLEGVSAGVPLVTRPLFA--EQFYN--DKLA-VQ-AAVTWG 159 (232)
Q Consensus 93 ~~nv~v~~~~pq~---~lL~~~~~~~~I~hg----G~~sv~eal~~GvP~i~~P~~~--DQ~~n--A~~v-~~-G~g~~~ 159 (232)
..++.+.++.+.. .++..+++ ||.-. -..++.||+++|+|.|+....+ |...+ ...+ .. +-|...
T Consensus 836 ~drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf 913 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF 913 (977)
T ss_pred CCeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe
Confidence 4568887777764 47888887 77532 1447999999999999876543 32211 1111 12 445544
Q ss_pred cccCCCcccCHHHHHHHHHHHHc----CChhhHHHHHH
Q 046553 160 LEDKSGLVIKREKVKEAIEKLMD----RGKQGEKRRKR 193 (232)
Q Consensus 160 ~~~~~~~~~~~~~l~~~i~~vl~----d~~~~~~~~~~ 193 (232)
.. .+++.+..+|.+++. |++..+.+.++
T Consensus 914 ~~------~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~ 945 (977)
T PLN02939 914 LT------PDEQGLNSALERAFNYYKRKPEVWKQLVQK 945 (977)
T ss_pred cC------CCHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 44 468888888888764 56444455443
No 126
>PHA01630 putative group 1 glycosyl transferase
Probab=94.31 E-value=2 Score=37.79 Aligned_cols=77 Identities=13% Similarity=-0.014 Sum_probs=45.2
Q ss_pred ccchh---hhhcccCcceEEecCC--chhHHHHHHhCCCeeeccccc--chhH---HHHHHH---------h---hhhhc
Q 046553 101 WAPQV---LLLSHRAIGGFLTHCG--WNSTLEGVSAGVPLVTRPLFA--EQFY---NDKLAV---------Q---AAVTW 158 (232)
Q Consensus 101 ~~pq~---~lL~~~~~~~~I~hgG--~~sv~eal~~GvP~i~~P~~~--DQ~~---nA~~v~---------~---G~g~~ 158 (232)
++|.. .++..+++-++-++.. ..++.||+++|+|+|+....+ |... |+..+. . ++|..
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~ 276 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYF 276 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccc
Confidence 35543 4788888833323332 568999999999999976533 3221 211111 0 23444
Q ss_pred ccccCCCcccCHHHHHHHHHHHHcCC
Q 046553 159 GLEDKSGLVIKREKVKEAIEKLMDRG 184 (232)
Q Consensus 159 ~~~~~~~~~~~~~~l~~~i~~vl~d~ 184 (232)
... +.+++...+.++|.|+
T Consensus 277 v~~-------~~~~~~~~ii~~l~~~ 295 (331)
T PHA01630 277 LDP-------DIEDAYQKLLEALANW 295 (331)
T ss_pred cCC-------CHHHHHHHHHHHHhCC
Confidence 332 4667777788888763
No 127
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=94.00 E-value=0.81 Score=42.94 Aligned_cols=92 Identities=12% Similarity=0.116 Sum_probs=65.5
Q ss_pred CCeEEecccc--hh-hhhcccCcceEEecC---CchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCc
Q 046553 94 RGFIIRGWAP--QV-LLLSHRAIGGFLTHC---GWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGL 166 (232)
Q Consensus 94 ~nv~v~~~~p--q~-~lL~~~~~~~~I~hg---G~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~ 166 (232)
..+.+.++.+ +. ..+..+.+ +|.=+ |.++..||+.+|+|+| .......|++ -=|..+ +
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~~NG~li--~---- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHNKNGYII--D---- 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcCCCcEEe--C----
Confidence 4677777777 33 57777777 77654 6779999999999999 2222344444 334433 1
Q ss_pred ccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHH
Q 046553 167 VIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGEIAN 202 (232)
Q Consensus 167 ~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~~ 202 (232)
+..++.+++..+|.+++....+...+-+.+..+-
T Consensus 474 --d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 474 --DISELLKALDYYLDNLKNWNYSLAYSIKLIDDYS 507 (519)
T ss_pred --CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh
Confidence 4788999999999998777777777777776653
No 128
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=93.84 E-value=0.062 Score=38.76 Aligned_cols=55 Identities=15% Similarity=0.108 Sum_probs=46.0
Q ss_pred hhhHHHHhcCCCCCcEEEEEeCCCCCC---CH--HHHHHHHHHHhhCCCcEEEEEcCCCC
Q 046553 20 DEQCLKWLDSWEPWSVIYACLGSICGL---AT--WQLLELGLGLEASSQPFIWVIRGGER 74 (232)
Q Consensus 20 ~~~l~~~l~~~~~~~vV~vs~GS~~~~---~~--~~~~~l~~~l~~~~~~~i~~~~~~~~ 74 (232)
...+..|+...+.+|.|+||+||.... .. ..+..++++++..+..+|..++....
T Consensus 27 ~~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~ 86 (97)
T PF06722_consen 27 PAVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQR 86 (97)
T ss_dssp SEEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCC
T ss_pred CCCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHH
Confidence 456778999999999999999999974 22 46788999999999999999886653
No 129
>PLN02846 digalactosyldiacylglycerol synthase
Probab=92.67 E-value=3 Score=38.58 Aligned_cols=73 Identities=16% Similarity=0.090 Sum_probs=49.0
Q ss_pred EEecccchhhhhcccCcceEEecC----CchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHH
Q 046553 97 IIRGWAPQVLLLSHRAIGGFLTHC----GWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKRE 171 (232)
Q Consensus 97 ~v~~~~pq~~lL~~~~~~~~I~hg----G~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~ 171 (232)
++.++.+...++..+++ ||.-+ =..++.||+++|+|+|+..... | ..+.+ +-|... -+.+
T Consensus 287 vf~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~~~ng~~~--------~~~~ 351 (462)
T PLN02846 287 VYPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQFPNCRTY--------DDGK 351 (462)
T ss_pred EECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeecCCceEec--------CCHH
Confidence 34566666668888887 87763 3568999999999999975432 1 33333 333222 1467
Q ss_pred HHHHHHHHHHcCC
Q 046553 172 KVKEAIEKLMDRG 184 (232)
Q Consensus 172 ~l~~~i~~vl~d~ 184 (232)
++.+++.++|.++
T Consensus 352 ~~a~ai~~~l~~~ 364 (462)
T PLN02846 352 GFVRATLKALAEE 364 (462)
T ss_pred HHHHHHHHHHccC
Confidence 8888999988753
No 130
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=92.62 E-value=0.7 Score=36.61 Aligned_cols=48 Identities=19% Similarity=0.223 Sum_probs=35.9
Q ss_pred CCCeEEecccch---hh-hhcccCcceEEecCC----chhHHHHHHhCCCeeeccccc
Q 046553 93 GRGFIIRGWAPQ---VL-LLSHRAIGGFLTHCG----WNSTLEGVSAGVPLVTRPLFA 142 (232)
Q Consensus 93 ~~nv~v~~~~pq---~~-lL~~~~~~~~I~hgG----~~sv~eal~~GvP~i~~P~~~ 142 (232)
..|+.+.++++. .. ++..+++ +++-.. .+++.||+++|+|+|+.+...
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 578888888632 23 3434777 777776 789999999999999987654
No 131
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=92.61 E-value=0.86 Score=39.98 Aligned_cols=107 Identities=16% Similarity=0.080 Sum_probs=66.1
Q ss_pred HHHhcCC-CCCcEEEEEeCCCCC---CCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeE-E
Q 046553 24 LKWLDSW-EPWSVIYACLGSICG---LATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFI-I 98 (232)
Q Consensus 24 ~~~l~~~-~~~~vV~vs~GS~~~---~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~-v 98 (232)
..++... .+++.|.+..|+... ++.+.+.++++.+...++++++..++.... .. +.+.+.......++. +
T Consensus 171 ~~~l~~~~~~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e---~~--~~~~i~~~~~~~~~~~l 245 (344)
T TIGR02201 171 RALLDEAGVGQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDE---LA--MVNEIAQGCQTPRVTSL 245 (344)
T ss_pred HHHHHhcCCCCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHH---HH--HHHHHHhhCCCCccccc
Confidence 3445432 145677778777654 568888899988877788877664432110 00 112332222222221 2
Q ss_pred ecc--cchh-hhhcccCcceEEecCCchhHHHHHHhCCCeeec
Q 046553 99 RGW--APQV-LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTR 138 (232)
Q Consensus 99 ~~~--~pq~-~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~ 138 (232)
.+- +++. .++.++++ +|+. ..|.++=|.+.|+|+|.+
T Consensus 246 ~g~~sL~el~ali~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 246 AGKLTLPQLAALIDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred CCCCCHHHHHHHHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 332 3343 68888888 9998 688999999999999986
No 132
>PRK14099 glycogen synthase; Provisional
Probab=92.48 E-value=2.9 Score=38.82 Aligned_cols=93 Identities=12% Similarity=0.109 Sum_probs=52.4
Q ss_pred CCe-EEecccchhh-hh-cccCcceEEec---CC-chhHHHHHHhCCCeeeccccc--chhHHHH-HH--Hh-hhhhccc
Q 046553 94 RGF-IIRGWAPQVL-LL-SHRAIGGFLTH---CG-WNSTLEGVSAGVPLVTRPLFA--EQFYNDK-LA--VQ-AAVTWGL 160 (232)
Q Consensus 94 ~nv-~v~~~~pq~~-lL-~~~~~~~~I~h---gG-~~sv~eal~~GvP~i~~P~~~--DQ~~nA~-~v--~~-G~g~~~~ 160 (232)
.++ .+.+|-.... ++ ..+++ |+.- =| ..+..||+++|+|.|+....+ |...+.. .. .. +.|+..+
T Consensus 350 ~~v~~~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~ 427 (485)
T PRK14099 350 GQIGVVIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFS 427 (485)
T ss_pred CCEEEEeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeC
Confidence 344 4566644332 33 34666 6642 22 347789999998777654322 3222111 01 11 3566655
Q ss_pred ccCCCcccCHHHHHHHHHH---HHcCChhhHHHHHHH
Q 046553 161 EDKSGLVIKREKVKEAIEK---LMDRGKQGEKRRKRT 194 (232)
Q Consensus 161 ~~~~~~~~~~~~l~~~i~~---vl~d~~~~~~~~~~a 194 (232)
. -+++.+.++|.+ ++.|++..+++.+++
T Consensus 428 ~------~d~~~La~ai~~a~~l~~d~~~~~~l~~~~ 458 (485)
T PRK14099 428 P------VTADALAAALRKTAALFADPVAWRRLQRNG 458 (485)
T ss_pred C------CCHHHHHHHHHHHHHHhcCHHHHHHHHHHh
Confidence 5 468899999987 566765555555554
No 133
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=92.22 E-value=0.94 Score=38.44 Aligned_cols=96 Identities=16% Similarity=0.098 Sum_probs=60.6
Q ss_pred CcEEEEEeCCCCC---CCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCC-eEEecc--cch-h
Q 046553 33 WSVIYACLGSICG---LATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRG-FIIRGW--APQ-V 105 (232)
Q Consensus 33 ~~vV~vs~GS~~~---~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~n-v~v~~~--~pq-~ 105 (232)
++.|.+..|+... ++.+.+.++++.+.+.++++++..++.+ .+ .-+.+.+.....+ +.+.+- +.+ .
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e-~~------~~~~i~~~~~~~~~~~~~~~~~l~e~~ 193 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAE-RE------LAEEIAAALGGPRVVNLAGKTSLRELA 193 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhh-HH------HHHHHHHhcCCCccccCcCCCCHHHHH
Confidence 5677777777654 5688889999988777888886654332 11 1122322221122 222222 223 3
Q ss_pred hhhcccCcceEEecCCchhHHHHHHhCCCeeec
Q 046553 106 LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTR 138 (232)
Q Consensus 106 ~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~ 138 (232)
.++.++++ +|+.- .|.++=|.+.|+|+|++
T Consensus 194 ~li~~~~l--~I~~D-sg~~HlA~a~~~p~i~l 223 (279)
T cd03789 194 ALLARADL--VVTND-SGPMHLAAALGTPTVAL 223 (279)
T ss_pred HHHHhCCE--EEeeC-CHHHHHHHHcCCCEEEE
Confidence 68888888 99975 47788889999999886
No 134
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=92.16 E-value=1.9 Score=39.72 Aligned_cols=104 Identities=15% Similarity=0.069 Sum_probs=64.6
Q ss_pred ecccchh---hhhcccCcceEEe---cCC-chhHHHHHHhCCC----eeecccccchhHHHHHHHhhhhhcccccCCCcc
Q 046553 99 RGWAPQV---LLLSHRAIGGFLT---HCG-WNSTLEGVSAGVP----LVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLV 167 (232)
Q Consensus 99 ~~~~pq~---~lL~~~~~~~~I~---hgG-~~sv~eal~~GvP----~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~ 167 (232)
.+.+|+. .++..+++ |+. +=| ..++.||+++|+| +|+--..+-. ..+ +-|+.+++
T Consensus 341 ~~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~----~~l--~~gllVnP------ 406 (456)
T TIGR02400 341 NRSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAA----QEL--NGALLVNP------ 406 (456)
T ss_pred cCCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCCh----HHh--CCcEEECC------
Confidence 3455554 46788888 665 335 4478899999999 6665443311 111 23455555
Q ss_pred cCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHH
Q 046553 168 IKREKVKEAIEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVI 223 (232)
Q Consensus 168 ~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~ 223 (232)
.+.+.+.++|.++|+++. +..+++.+++.+.+. .-+....+.++++.|.
T Consensus 407 ~d~~~lA~aI~~aL~~~~--~er~~r~~~~~~~v~-----~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 407 YDIDGMADAIARALTMPL--EEREERHRAMMDKLR-----KNDVQRWREDFLSDLN 455 (456)
T ss_pred CCHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHhh
Confidence 578999999999998652 244455555555543 2456667777777653
No 135
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=91.59 E-value=1.7 Score=37.97 Aligned_cols=97 Identities=13% Similarity=0.086 Sum_probs=61.6
Q ss_pred CCCcEEEEEeCCCC-C---CCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeE-Eec--ccc
Q 046553 31 EPWSVIYACLGSIC-G---LATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFI-IRG--WAP 103 (232)
Q Consensus 31 ~~~~vV~vs~GS~~-~---~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~-v~~--~~p 103 (232)
++++.|.+.-|+.. . ++.+.+.++++.+.+.+.++++. |++...+ .-+.+.+.. +.++. +.+ .+.
T Consensus 172 ~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~-G~~~e~~------~~~~i~~~~-~~~~~~l~g~~sL~ 243 (334)
T TIGR02195 172 TERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLF-GSAKDHP------AGNEIEALL-PGELRNLAGETSLD 243 (334)
T ss_pred CCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEE-EChhhHH------HHHHHHHhC-CcccccCCCCCCHH
Confidence 35778888887742 2 56888889999887767777655 4432211 112332222 22222 222 223
Q ss_pred hh-hhhcccCcceEEecCCchhHHHHHHhCCCeeec
Q 046553 104 QV-LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTR 138 (232)
Q Consensus 104 q~-~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~ 138 (232)
+. .++.++++ +|+.- .|.++=|.+.|+|+|.+
T Consensus 244 el~ali~~a~l--~I~~D-SGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 244 EAVDLIALAKA--VVTND-SGLMHVAAALNRPLVAL 276 (334)
T ss_pred HHHHHHHhCCE--EEeeC-CHHHHHHHHcCCCEEEE
Confidence 33 68888888 88874 77899999999999975
No 136
>PRK10125 putative glycosyl transferase; Provisional
Probab=91.41 E-value=6.9 Score=35.36 Aligned_cols=101 Identities=11% Similarity=-0.001 Sum_probs=57.3
Q ss_pred HHHHHHHHHHhhCCCcE-EEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccc-h---hhhhcccCcceEEecC---
Q 046553 49 WQLLELGLGLEASSQPF-IWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAP-Q---VLLLSHRAIGGFLTHC--- 120 (232)
Q Consensus 49 ~~~~~l~~~l~~~~~~~-i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~p-q---~~lL~~~~~~~~I~hg--- 120 (232)
+....+++++...+..+ ++..|..... . ..++...++.+ + ..+++.+++ ||.-.
T Consensus 256 Kg~~~li~A~~~l~~~~~L~ivG~g~~~-------~---------~~~v~~~g~~~~~~~l~~~y~~aDv--fV~pS~~E 317 (405)
T PRK10125 256 KTDQQLVREMMALGDKIELHTFGKFSPF-------T---------AGNVVNHGFETDKRKLMSALNQMDA--LVFSSRVD 317 (405)
T ss_pred ccHHHHHHHHHhCCCCeEEEEEcCCCcc-------c---------ccceEEecCcCCHHHHHHHHHhCCE--EEECCccc
Confidence 33456777776654332 3445532210 1 23455555543 2 346666777 66533
Q ss_pred -CchhHHHHHHhCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHH
Q 046553 121 -GWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAI 177 (232)
Q Consensus 121 -G~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i 177 (232)
-..++.||+++|+|+|.....+ ....+..+-|...+. -+.+.+...+
T Consensus 318 gfp~vilEAmA~G~PVVat~~gG----~~Eiv~~~~G~lv~~------~d~~~La~~~ 365 (405)
T PRK10125 318 NYPLILCEALSIGVPVIATHSDA----AREVLQKSGGKTVSE------EEVLQLAQLS 365 (405)
T ss_pred cCcCHHHHHHHcCCCEEEeCCCC----hHHhEeCCcEEEECC------CCHHHHHhcc
Confidence 2568999999999999998754 122222255666655 3567777643
No 137
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=90.86 E-value=2.6 Score=37.16 Aligned_cols=99 Identities=10% Similarity=0.060 Sum_probs=62.7
Q ss_pred CCcEEEEEeCCCCC---CCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCC-eEEecc--cchh
Q 046553 32 PWSVIYACLGSICG---LATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRG-FIIRGW--APQV 105 (232)
Q Consensus 32 ~~~vV~vs~GS~~~---~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~n-v~v~~~--~pq~ 105 (232)
+++.|.+.-|+... ++.+.+.++++.+.+.++++++..++.+.. .+ ..+.+.+...... +-+.+- +.+.
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e--~~---~~~~i~~~~~~~~~~~l~g~~sL~el 256 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDD--LA---CVNEIAQGCQTPPVTALAGKTTFPEL 256 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHH--HH---HHHHHHHhcCCCccccccCCCCHHHH
Confidence 35678788887654 568888899999877788877665433211 00 1122222211122 223332 3333
Q ss_pred -hhhcccCcceEEecCCchhHHHHHHhCCCeeec
Q 046553 106 -LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTR 138 (232)
Q Consensus 106 -~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~ 138 (232)
.++.++++ ||+.- .|.++=|.+.|+|+|.+
T Consensus 257 ~ali~~a~l--~v~nD-SGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 257 GALIDHAQL--FIGVD-SAPAHIAAAVNTPLICL 287 (352)
T ss_pred HHHHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 68888988 99874 78899999999999875
No 138
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=90.67 E-value=1.8 Score=38.07 Aligned_cols=97 Identities=13% Similarity=0.117 Sum_probs=61.3
Q ss_pred CCcEEEEEeCCCC-C---CCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCC---C-eEEecc--
Q 046553 32 PWSVIYACLGSIC-G---LATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGR---G-FIIRGW-- 101 (232)
Q Consensus 32 ~~~vV~vs~GS~~-~---~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~---n-v~v~~~-- 101 (232)
+++.|.+.-|+.. . ++.+.+.++++.+...++++++. |++.... ..+.+....... + +.+.+-
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~-Gg~~e~~------~~~~i~~~~~~~~~~~~~~l~g~~s 251 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLF-GSAKDHE------AGNEILAALNTEQQAWCRNLAGETQ 251 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEE-eCHHhHH------HHHHHHHhcccccccceeeccCCCC
Confidence 5678888888752 2 56888999999887667887755 4332111 222232222111 1 222232
Q ss_pred cchh-hhhcccCcceEEecCCchhHHHHHHhCCCeeec
Q 046553 102 APQV-LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTR 138 (232)
Q Consensus 102 ~pq~-~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~ 138 (232)
+.+. .++.++++ +|+. ..|.++=|.+.|+|+|.+
T Consensus 252 L~el~ali~~a~l--~I~n-DTGp~HlAaA~g~P~val 286 (348)
T PRK10916 252 LEQAVILIAACKA--IVTN-DSGLMHVAAALNRPLVAL 286 (348)
T ss_pred HHHHHHHHHhCCE--EEec-CChHHHHHHHhCCCEEEE
Confidence 2333 58888888 8886 478899999999999875
No 139
>PLN02501 digalactosyldiacylglycerol synthase
Probab=90.57 E-value=7.1 Score=38.18 Aligned_cols=77 Identities=10% Similarity=0.042 Sum_probs=51.5
Q ss_pred CeEEecccchh-hhhcccCcceEEecC---C-chhHHHHHHhCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccC
Q 046553 95 GFIIRGWAPQV-LLLSHRAIGGFLTHC---G-WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIK 169 (232)
Q Consensus 95 nv~v~~~~pq~-~lL~~~~~~~~I~hg---G-~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~ 169 (232)
++.+.++.++. .++..+++ ||.-+ | ..++.||+++|+|+|+....+... +..|.+.++. -+
T Consensus 602 ~V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~g~nGll~-------~D 667 (794)
T PLN02501 602 NLNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRSFPNCLTY-------KT 667 (794)
T ss_pred EEEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----EeecCCeEec-------CC
Confidence 35566677655 48888887 76532 2 458999999999999986654221 2222222221 25
Q ss_pred HHHHHHHHHHHHcCCh
Q 046553 170 REKVKEAIEKLMDRGK 185 (232)
Q Consensus 170 ~~~l~~~i~~vl~d~~ 185 (232)
.+++..+|.++|.|+.
T Consensus 668 ~EafAeAI~~LLsd~~ 683 (794)
T PLN02501 668 SEDFVAKVKEALANEP 683 (794)
T ss_pred HHHHHHHHHHHHhCch
Confidence 8899999999999863
No 140
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=90.10 E-value=1.4 Score=36.55 Aligned_cols=99 Identities=12% Similarity=0.055 Sum_probs=54.6
Q ss_pred CCcEEEEEeCCCCC---CCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEeccc--ch-h
Q 046553 32 PWSVIYACLGSICG---LATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWA--PQ-V 105 (232)
Q Consensus 32 ~~~vV~vs~GS~~~---~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~--pq-~ 105 (232)
+++.|.+..|+... ++.+.+.++++.+.+.++++++..+..... +. .-+.+........+.+.+-. .+ .
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~l~e~~ 178 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQE---KE--IADQIAAGLQNPVINLAGKTSLRELA 178 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHH---HH--HHHHHHTTHTTTTEEETTTS-HHHHH
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHH---HH--HHHHHHHhcccceEeecCCCCHHHHH
Confidence 56788888887665 568889999999988887766544332200 00 11111111111233343322 23 3
Q ss_pred hhhcccCcceEEecCCchhHHHHHHhCCCeeec
Q 046553 106 LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTR 138 (232)
Q Consensus 106 ~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~ 138 (232)
.++.++++ +|+.- .|.++=|.+.|+|+|.+
T Consensus 179 ali~~a~~--~I~~D-tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 179 ALISRADL--VIGND-TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp HHHHTSSE--EEEES-SHHHHHHHHTT--EEEE
T ss_pred HHHhcCCE--EEecC-ChHHHHHHHHhCCEEEE
Confidence 58888887 88864 77899999999999998
No 141
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=89.91 E-value=1.2 Score=38.68 Aligned_cols=132 Identities=14% Similarity=-0.060 Sum_probs=74.3
Q ss_pred CcEEEEEeCCCCC---CCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEec--ccchh-h
Q 046553 33 WSVIYACLGSICG---LATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRG--WAPQV-L 106 (232)
Q Consensus 33 ~~vV~vs~GS~~~---~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~--~~pq~-~ 106 (232)
++.|.+..|+... ++.+.+.++++.+.+.++++++..|+....+ ..+.+.+. .+++.+.+ .+.+. .
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~e~~------~~~~i~~~--~~~~~l~g~~sL~elaa 249 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEHEEQ------RAKRLAEG--FPYVEVLPKLSLEQVAR 249 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHH------HHHHHHcc--CCcceecCCCCHHHHHH
Confidence 4555444444332 6688889999998777888765545432110 21222221 12333333 23343 6
Q ss_pred hhcccCcceEEecCCchhHHHHHHhCCCeeec--ccccch----hHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHH
Q 046553 107 LLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTR--PLFAEQ----FYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKL 180 (232)
Q Consensus 107 lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~--P~~~DQ----~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~v 180 (232)
++.++++ +|+.. .|.++=|.+.|+|+|.+ |..... ..|...+.-. .-++. .++++++.++++++
T Consensus 250 li~~a~l--~I~nD-SGp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~~~~-~~cm~------~I~~e~V~~~~~~~ 319 (322)
T PRK10964 250 VLAGAKA--VVSVD-TGLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHACRSP-GKSMA------DLSAETVFQKLETL 319 (322)
T ss_pred HHHhCCE--EEecC-CcHHHHHHHhCCCEEEEECCCCcccccCCCCCceeecCC-Ccccc------cCCHHHHHHHHHHH
Confidence 8889998 99875 77899999999999986 322111 0111111110 01111 28888888888877
Q ss_pred Hc
Q 046553 181 MD 182 (232)
Q Consensus 181 l~ 182 (232)
|.
T Consensus 320 l~ 321 (322)
T PRK10964 320 IS 321 (322)
T ss_pred hh
Confidence 64
No 142
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=89.90 E-value=0.91 Score=44.60 Aligned_cols=94 Identities=14% Similarity=-0.001 Sum_probs=60.7
Q ss_pred CCCeEEeccc-ch---hhhhcc-cC-cceEEecC----CchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccc
Q 046553 93 GRGFIIRGWA-PQ---VLLLSH-RA-IGGFLTHC----GWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLE 161 (232)
Q Consensus 93 ~~nv~v~~~~-pq---~~lL~~-~~-~~~~I~hg----G~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~ 161 (232)
..++.+.++. |. ..++.. ++ .++||.-. -..++.||+++|+|+|+.... -.+..+.+ .-|..++.
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G----G~~EiV~dg~tGfLVdp 693 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG----GPLEIIQDGVSGFHIDP 693 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHhcCCCcEEEeCC
Confidence 3567776664 32 234432 22 12366532 245899999999999997554 35566667 67777766
Q ss_pred cCCCcccCHHHHHHHHHHHH----cCChhhHHHHHHHHH
Q 046553 162 DKSGLVIKREKVKEAIEKLM----DRGKQGEKRRKRTRQ 196 (232)
Q Consensus 162 ~~~~~~~~~~~l~~~i~~vl----~d~~~~~~~~~~a~~ 196 (232)
-+++.+.++|.+++ .|++..+.+.+++.+
T Consensus 694 ------~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~ 726 (784)
T TIGR02470 694 ------YHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQ 726 (784)
T ss_pred ------CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 36888999888875 577666667666554
No 143
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=89.22 E-value=15 Score=32.30 Aligned_cols=134 Identities=17% Similarity=0.194 Sum_probs=79.8
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHHH-h--hCCCcEEEEEcCCCCCccchhhhhhhhHHHH----hcCCCeEE-ecccc--
Q 046553 34 SVIYACLGSICGLATWQLLELGLGL-E--ASSQPFIWVIRGGERSQGLEKWIQEEGLEER----AKGRGFII-RGWAP-- 103 (232)
Q Consensus 34 ~vV~vs~GS~~~~~~~~~~~l~~~l-~--~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~----~~~~nv~v-~~~~p-- 103 (232)
..+-|-.|..+..+++.++.+ +++ . ..+.+++.-++-+... ..| .+.+.+. ...+++.+ ..++|
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L-~~l~~~~~~~v~ii~PlsYp~gn---~~Y--i~~V~~~~~~lF~~~~~~~L~e~l~f~ 218 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEAL-RALHQQFGDNVKIIVPMGYPANN---QAY--IEEVRQAGLALFGAENFQILTEKLPFD 218 (322)
T ss_pred CceEEEEeCCCCCcccHHHHH-HHHHHHhCCCeEEEEECCcCCCC---HHH--HHHHHHHHHHhcCcccEEehhhhCCHH
Confidence 356677788888777665543 333 2 3345666666543221 112 1222221 22356654 45676
Q ss_pred -hhhhhcccCcceEEec--CCchhHHHHHHhCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHH
Q 046553 104 -QVLLLSHRAIGGFLTH--CGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKL 180 (232)
Q Consensus 104 -q~~lL~~~~~~~~I~h--gG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~v 180 (232)
...+|+.|+++.|+|+ =|.|++.-.+++|+|+++-. +-+.+....+.|+-+..+.+. ++...+.++=+++
T Consensus 219 eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r---~n~fwqdl~e~gv~Vlf~~d~----L~~~~v~e~~rql 291 (322)
T PRK02797 219 DYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSR---DNPFWQDLTEQGLPVLFTGDD----LDEDIVREAQRQL 291 (322)
T ss_pred HHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEec---CCchHHHHHhCCCeEEecCCc----ccHHHHHHHHHHH
Confidence 4579999999888886 47999999999999999863 223333322227777555554 7777666654443
No 144
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=88.97 E-value=10 Score=33.11 Aligned_cols=40 Identities=20% Similarity=0.211 Sum_probs=33.0
Q ss_pred cchhhhhcccCcceEEecCCchhHHHHHHhCCCeeeccccc
Q 046553 102 APQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFA 142 (232)
Q Consensus 102 ~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~ 142 (232)
-|...+|..++. ++||--..+-+.||+..|+|+.++|+..
T Consensus 220 nPy~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 220 NPYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred CcHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCC
Confidence 356678888876 6777777888999999999999999876
No 145
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=88.24 E-value=5.5 Score=35.83 Aligned_cols=87 Identities=15% Similarity=0.069 Sum_probs=61.1
Q ss_pred CCCeEEec---ccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccC
Q 046553 93 GRGFIIRG---WAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIK 169 (232)
Q Consensus 93 ~~nv~v~~---~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~ 169 (232)
.+++.+.+ |.+...++.++.+ ++|-.|. -.-||..+|+|.+++=..-+++. .++.|.-+... .+
T Consensus 261 ~~~v~li~pl~~~~f~~L~~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE---~v~agt~~lvg-------~~ 327 (383)
T COG0381 261 VERVKLIDPLGYLDFHNLMKNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTTERPE---GVEAGTNILVG-------TD 327 (383)
T ss_pred CCcEEEeCCcchHHHHHHHHhceE--EEecCCc-hhhhHHhcCCcEEeeccCCCCcc---ceecCceEEeC-------cc
Confidence 34676654 5566778888877 8888764 36789999999999977667665 22224443333 45
Q ss_pred HHHHHHHHHHHHcCChhhHHHHHHHHH
Q 046553 170 REKVKEAIEKLMDRGKQGEKRRKRTRQ 196 (232)
Q Consensus 170 ~~~l~~~i~~vl~d~~~~~~~~~~a~~ 196 (232)
.+.+.+++.++++++ +..+++..
T Consensus 328 ~~~i~~~~~~ll~~~----~~~~~m~~ 350 (383)
T COG0381 328 EENILDAATELLEDE----EFYERMSN 350 (383)
T ss_pred HHHHHHHHHHHhhCh----HHHHHHhc
Confidence 789999999999987 55555444
No 146
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.17 E-value=1.2 Score=38.84 Aligned_cols=93 Identities=14% Similarity=0.101 Sum_probs=58.7
Q ss_pred cCCCeEE-ecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhH--HHHHHHh--hhhhcccccCCCc
Q 046553 92 KGRGFII-RGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFY--NDKLAVQ--AAVTWGLEDKSGL 166 (232)
Q Consensus 92 ~~~nv~v-~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~--nA~~v~~--G~g~~~~~~~~~~ 166 (232)
..+|..+ ..|-...++|.++++ .|--.|. .+-+++-.|+|+|.+|-.+-|+. .|.+=.+ |..+.+...
T Consensus 292 ~kdnc~l~lsqqsfadiLH~ada--algmAGT-AtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~---- 364 (412)
T COG4370 292 GKDNCSLWLSQQSFADILHAADA--ALGMAGT-ATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRP---- 364 (412)
T ss_pred ccCceEEEEeHHHHHHHHHHHHH--HHHhccc-hHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCC----
Confidence 3445544 233334468877777 5555543 23457889999999999888865 5555555 888866653
Q ss_pred ccCHHHHHHHHHHHHcCChhhHHHHHH
Q 046553 167 VIKREKVKEAIEKLMDRGKQGEKRRKR 193 (232)
Q Consensus 167 ~~~~~~l~~~i~~vl~d~~~~~~~~~~ 193 (232)
++..-..+.+++|.|+++.+.+|.|
T Consensus 365 --~aq~a~~~~q~ll~dp~r~~air~n 389 (412)
T COG4370 365 --EAQAAAQAVQELLGDPQRLTAIRHN 389 (412)
T ss_pred --chhhHHHHHHHHhcChHHHHHHHhc
Confidence 2333333444599999776666644
No 147
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=87.82 E-value=5.8 Score=30.94 Aligned_cols=138 Identities=15% Similarity=0.156 Sum_probs=63.4
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchhhhhcccCc
Q 046553 34 SVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQVLLLSHRAI 113 (232)
Q Consensus 34 ~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~ 113 (232)
|.|.|-+||.. +...+++....|.+.+..+-..+-+-.- .|+.+.+ |+....- ..+++
T Consensus 1 p~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~saHR--------~p~~l~~-----------~~~~~~~-~~~~v 58 (150)
T PF00731_consen 1 PKVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASAHR--------TPERLLE-----------FVKEYEA-RGADV 58 (150)
T ss_dssp -EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--TTT--------SHHHHHH-----------HHHHTTT-TTESE
T ss_pred CeEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEeccC--------CHHHHHH-----------HHHHhcc-CCCEE
Confidence 45667778776 5677788888888877655544433322 4444332 1111110 12333
Q ss_pred ceEEecCCchhHHHHH---HhCCCeeecccccchhHH----HHHHHh--hhhhcccc-cCCCcccCHHHHHHHHHHHHcC
Q 046553 114 GGFLTHCGWNSTLEGV---SAGVPLVTRPLFAEQFYN----DKLAVQ--AAVTWGLE-DKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 114 ~~~I~hgG~~sv~eal---~~GvP~i~~P~~~DQ~~n----A~~v~~--G~g~~~~~-~~~~~~~~~~~l~~~i~~vl~d 183 (232)
||.=.|...-.-.+ ..-.|+|.+|....+... ...+.- |+++-.-. +. ..+..-+.-.|-.+ .|
T Consensus 59 --iIa~AG~~a~Lpgvva~~t~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~~---~~nAA~~A~~ILa~-~d 132 (150)
T PF00731_consen 59 --IIAVAGMSAALPGVVASLTTLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGINN---GFNAALLAARILAL-KD 132 (150)
T ss_dssp --EEEEEESS--HHHHHHHHSSS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SSTH---HHHHHHHHHHHHHT-T-
T ss_pred --EEEECCCcccchhhheeccCCCEEEeecCcccccCcccHHHHHhccCCCCceEEEccC---chHHHHHHHHHHhc-CC
Confidence 77766644322222 236999999987654322 222333 66652221 00 12333333333322 34
Q ss_pred ChhhHHHHHHHHHHHHHHHh
Q 046553 184 GKQGEKRRKRTRQLGEIANR 203 (232)
Q Consensus 184 ~~~~~~~~~~a~~l~~~~~~ 203 (232)
+ +++++.+..++.+++
T Consensus 133 ~----~l~~kl~~~~~~~~~ 148 (150)
T PF00731_consen 133 P----ELREKLRAYREKMKE 148 (150)
T ss_dssp H----HHHHHHHHHHHHHHH
T ss_pred H----HHHHHHHHHHHHHHc
Confidence 5 666666666666553
No 148
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=87.74 E-value=14 Score=34.10 Aligned_cols=71 Identities=15% Similarity=0.096 Sum_probs=45.8
Q ss_pred Eecccchh---hhhcccCcceEEe---cCC-chhHHHHHHhCCC----eeeccccc--chhHHHHHHHhhhhhcccccCC
Q 046553 98 IRGWAPQV---LLLSHRAIGGFLT---HCG-WNSTLEGVSAGVP----LVTRPLFA--EQFYNDKLAVQAAVTWGLEDKS 164 (232)
Q Consensus 98 v~~~~pq~---~lL~~~~~~~~I~---hgG-~~sv~eal~~GvP----~i~~P~~~--DQ~~nA~~v~~G~g~~~~~~~~ 164 (232)
+.+++++. .++..+++ ||. +-| ..++.||+++|+| +|+--..+ ++ -.-|+.++.
T Consensus 345 ~~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~--------~~~g~lv~p--- 411 (460)
T cd03788 345 LYRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE--------LSGALLVNP--- 411 (460)
T ss_pred EeCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccchhh--------cCCCEEECC---
Confidence 34566654 46888888 653 234 3477999999999 55442221 22 112344444
Q ss_pred CcccCHHHHHHHHHHHHcCC
Q 046553 165 GLVIKREKVKEAIEKLMDRG 184 (232)
Q Consensus 165 ~~~~~~~~l~~~i~~vl~d~ 184 (232)
.+.+++.++|.++++++
T Consensus 412 ---~d~~~la~ai~~~l~~~ 428 (460)
T cd03788 412 ---YDIDEVADAIHRALTMP 428 (460)
T ss_pred ---CCHHHHHHHHHHHHcCC
Confidence 46899999999999976
No 149
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=87.50 E-value=12 Score=34.46 Aligned_cols=81 Identities=7% Similarity=-0.036 Sum_probs=55.7
Q ss_pred CCCeEEe-cccc-h-hhhhcccCcceEEecCC--chhHHHHHHhCCCeeecccccchhHHHHHHHhhhhhcccccCCCcc
Q 046553 93 GRGFIIR-GWAP-Q-VLLLSHRAIGGFLTHCG--WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLV 167 (232)
Q Consensus 93 ~~nv~v~-~~~p-q-~~lL~~~~~~~~I~hgG--~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~ 167 (232)
.+|+++. ++.+ . ..++..|++-+-++|+. ..++.||+.+|+|++..=...... ..+.. |-....
T Consensus 327 y~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~---~~i~~--g~l~~~------ 395 (438)
T TIGR02919 327 YDNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNR---DFIAS--ENIFEH------ 395 (438)
T ss_pred cCCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCc---ccccC--CceecC------
Confidence 3676655 4566 3 36999999988889977 669999999999999864322111 11111 222233
Q ss_pred cCHHHHHHHHHHHHcCC
Q 046553 168 IKREKVKEAIEKLMDRG 184 (232)
Q Consensus 168 ~~~~~l~~~i~~vl~d~ 184 (232)
-+.+++.++|.++|.|+
T Consensus 396 ~~~~~m~~~i~~lL~d~ 412 (438)
T TIGR02919 396 NEVDQLISKLKDLLNDP 412 (438)
T ss_pred CCHHHHHHHHHHHhcCH
Confidence 35788999999999987
No 150
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=87.11 E-value=19 Score=32.03 Aligned_cols=136 Identities=15% Similarity=0.122 Sum_probs=85.5
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHHHh---hCCCcEEEEEcCCCCCccchhhhhhhhHHHH----hcCCCeEE-ecccch
Q 046553 33 WSVIYACLGSICGLATWQLLELGLGLE---ASSQPFIWVIRGGERSQGLEKWIQEEGLEER----AKGRGFII-RGWAPQ 104 (232)
Q Consensus 33 ~~vV~vs~GS~~~~~~~~~~~l~~~l~---~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~----~~~~nv~v-~~~~pq 104 (232)
+..+.|-.|..+..+++.+..+ +.+. ..+.+++.-++-+... +.| .+.+.+. ....++.+ .+++|-
T Consensus 183 ~~~ltILvGNSgd~sNnHieaL-~~L~~~~~~~~kIivPLsYg~~n---~~Y--i~~V~~~~~~lF~~~~~~iL~e~mpf 256 (360)
T PF07429_consen 183 KGKLTILVGNSGDPSNNHIEAL-EALKQQFGDDVKIIVPLSYGANN---QAY--IQQVIQAGKELFGAENFQILTEFMPF 256 (360)
T ss_pred CCceEEEEcCCCCCCccHHHHH-HHHHHhcCCCeEEEEECCCCCch---HHH--HHHHHHHHHHhcCccceeEhhhhCCH
Confidence 3466677888888776665543 2222 2356777666543211 111 1222221 23456754 568874
Q ss_pred ---hhhhcccCcceEEec--CCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHH
Q 046553 105 ---VLLLSHRAIGGFLTH--CGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIE 178 (232)
Q Consensus 105 ---~~lL~~~~~~~~I~h--gG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~ 178 (232)
..+|+.|+++.|.+. =|.|++.-.+++|+|+++-- +-+ --..+.+ |+-+.-..++ ++...+.++=+
T Consensus 257 ~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~~---~np-~~~~l~~~~ipVlf~~d~----L~~~~v~ea~r 328 (360)
T PF07429_consen 257 DEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLSR---DNP-FWQDLKEQGIPVLFYGDE----LDEALVREAQR 328 (360)
T ss_pred HHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEec---CCh-HHHHHHhCCCeEEecccc----CCHHHHHHHHH
Confidence 569999999777775 47999999999999999852 222 2334455 7777655554 88998888877
Q ss_pred HHHc
Q 046553 179 KLMD 182 (232)
Q Consensus 179 ~vl~ 182 (232)
++..
T Consensus 329 ql~~ 332 (360)
T PF07429_consen 329 QLAN 332 (360)
T ss_pred HHhh
Confidence 7754
No 151
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=84.49 E-value=21 Score=29.28 Aligned_cols=80 Identities=19% Similarity=0.300 Sum_probs=51.3
Q ss_pred CCCeEEecccch---hhhhcccCcceEEec---CCch-hHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCC
Q 046553 93 GRGFIIRGWAPQ---VLLLSHRAIGGFLTH---CGWN-STLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKS 164 (232)
Q Consensus 93 ~~nv~v~~~~pq---~~lL~~~~~~~~I~h---gG~~-sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~ 164 (232)
..++.+.+++|. ..++..+++ ++.- .|.+ ++.|++++|+|+|..+.. .....+.. +.|. +...
T Consensus 256 ~~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~----~~~e~~~~~~~g~-~~~~-- 326 (381)
T COG0438 256 EDNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDVG----GIPEVVEDGETGL-LVPP-- 326 (381)
T ss_pred CCcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCCC----ChHHHhcCCCceE-ecCC--
Confidence 467788888882 245666766 5554 2443 469999999999876542 22333333 3355 2221
Q ss_pred CcccCHHHHHHHHHHHHcCC
Q 046553 165 GLVIKREKVKEAIEKLMDRG 184 (232)
Q Consensus 165 ~~~~~~~~l~~~i~~vl~d~ 184 (232)
...+++..++..++++.
T Consensus 327 ---~~~~~~~~~i~~~~~~~ 343 (381)
T COG0438 327 ---GDVEELADALEQLLEDP 343 (381)
T ss_pred ---CCHHHHHHHHHHHhcCH
Confidence 25788999999999875
No 152
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=81.49 E-value=7.2 Score=34.25 Aligned_cols=95 Identities=14% Similarity=0.118 Sum_probs=60.2
Q ss_pred CcEEEEEeC-CCCC---CCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecc--cchh-
Q 046553 33 WSVIYACLG-SICG---LATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGW--APQV- 105 (232)
Q Consensus 33 ~~vV~vs~G-S~~~---~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~--~pq~- 105 (232)
++.|.++-| |.+. ++.+.+.++++.+.+.++++++..+. ...+ ..+.+..... ..+.+.+- +.+.
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~-~e~e------~~~~i~~~~~-~~~~l~~k~sL~e~~ 246 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGP-DEEE------RAEEIAKGLP-NAVILAGKTSLEELA 246 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecCh-HHHH------HHHHHHHhcC-CccccCCCCCHHHHH
Confidence 678888888 5433 67889999999998888665554443 2211 1122322221 11113332 3344
Q ss_pred hhhcccCcceEEecCCchhHHHHHHhCCCeeec
Q 046553 106 LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTR 138 (232)
Q Consensus 106 ~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~ 138 (232)
.++..+++ ||+. ..|-++=|.+.|+|+|.+
T Consensus 247 ~li~~a~l--~I~~-DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 247 ALIAGADL--VIGN-DSGPMHLAAALGTPTIAL 276 (334)
T ss_pred HHHhcCCE--EEcc-CChHHHHHHHcCCCEEEE
Confidence 46777776 7775 477889999999999986
No 153
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=81.46 E-value=24 Score=35.09 Aligned_cols=101 Identities=17% Similarity=0.142 Sum_probs=59.3
Q ss_pred hhhcccCcceEEec---CCch-hHHHHHHhCCC---eeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHH
Q 046553 106 LLLSHRAIGGFLTH---CGWN-STLEGVSAGVP---LVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIE 178 (232)
Q Consensus 106 ~lL~~~~~~~~I~h---gG~~-sv~eal~~GvP---~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~ 178 (232)
.+++.+++ |+.- -|.| +..|++++|+| +++++-++- .+..+ ...|+.+++ .+.+++.++|.
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G---~~~~l-~~~allVnP------~D~~~lA~AI~ 438 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAG---AGQSL-GAGALLVNP------WNITEVSSAIK 438 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCcC---chhhh-cCCeEEECC------CCHHHHHHHHH
Confidence 57888888 6644 3655 67799999999 444442211 11111 113566665 57999999999
Q ss_pred HHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHhh
Q 046553 179 KLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQR 225 (232)
Q Consensus 179 ~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~~ 225 (232)
++|+.+. +..+++.+++.+.++ .-+.......+++.+...
T Consensus 439 ~aL~m~~--~er~~r~~~~~~~v~-----~~~~~~Wa~~fl~~l~~~ 478 (797)
T PLN03063 439 EALNMSD--EERETRHRHNFQYVK-----THSAQKWADDFMSELNDI 478 (797)
T ss_pred HHHhCCH--HHHHHHHHHHHHhhh-----hCCHHHHHHHHHHHHHHH
Confidence 9998331 123334444444444 223445666666666544
No 154
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=80.42 E-value=2.2 Score=40.56 Aligned_cols=94 Identities=17% Similarity=0.252 Sum_probs=53.8
Q ss_pred chhhhhcccCcceEEecCC-c-hhHHHHHHhCCCeeeccccc-chhHHHH--HHHh-hhhhcccccCCCcccCHHHHHHH
Q 046553 103 PQVLLLSHRAIGGFLTHCG-W-NSTLEGVSAGVPLVTRPLFA-EQFYNDK--LAVQ-AAVTWGLEDKSGLVIKREKVKEA 176 (232)
Q Consensus 103 pq~~lL~~~~~~~~I~hgG-~-~sv~eal~~GvP~i~~P~~~-DQ~~nA~--~v~~-G~g~~~~~~~~~~~~~~~~l~~~ 176 (232)
|..+++.-|++++|-+.=- | -|-+||.++|||.|..=+.+ -++.+-. .-.. |+-++-+.+ .+.++....
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~-----~n~~e~v~~ 536 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRD-----KNYDESVNQ 536 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSS-----S-HHHHHHH
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCCC-----CCHHHHHHH
Confidence 3456777888877766221 2 38999999999999976532 2222111 1123 666655544 577777666
Q ss_pred HHHHHc-----CChhhHHHHHHHHHHHHHH
Q 046553 177 IEKLMD-----RGKQGEKRRKRTRQLGEIA 201 (232)
Q Consensus 177 i~~vl~-----d~~~~~~~~~~a~~l~~~~ 201 (232)
+.+.|. +..+....|.++++|++++
T Consensus 537 la~~l~~f~~~~~rqri~~Rn~ae~LS~~~ 566 (633)
T PF05693_consen 537 LADFLYKFCQLSRRQRIIQRNRAERLSDLA 566 (633)
T ss_dssp HHHHHHHHHT--HHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 666554 2345557888888888775
No 155
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=79.56 E-value=38 Score=29.23 Aligned_cols=97 Identities=18% Similarity=0.146 Sum_probs=57.4
Q ss_pred EEEEEeCCCCCC--CHHHHHH----HHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhc-CCCeEE----ecccc
Q 046553 35 VIYACLGSICGL--ATWQLLE----LGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAK-GRGFII----RGWAP 103 (232)
Q Consensus 35 vV~vs~GS~~~~--~~~~~~~----l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v----~~~~p 103 (232)
|.++.+|+.... ..+.... +...+.+.+..|+.......+.. +..-+..... .+.++. .++-|
T Consensus 164 vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRTp~~------~~s~l~~~l~s~~~i~w~~~d~g~NP 237 (329)
T COG3660 164 VAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRTPDT------VKSILKNNLNSSPGIVWNNEDTGYNP 237 (329)
T ss_pred EEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCCcHH------HHHHHHhccccCceeEeCCCCCCCCc
Confidence 445566776663 3444443 34455667889888776553221 1111111111 222222 24668
Q ss_pred hhhhhcccCcceEEecCCchhHHHHHHhCCCeeec
Q 046553 104 QVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTR 138 (232)
Q Consensus 104 q~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~ 138 (232)
...+|+.++. ++++--..+-..||++.|+|+.++
T Consensus 238 Y~~~La~Ady-ii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 238 YIDMLAAADY-IISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred hHHHHhhcce-EEEecchhhhhHHHhccCCCeEEE
Confidence 8899998887 344555577789999999998875
No 156
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=77.45 E-value=11 Score=29.49 Aligned_cols=39 Identities=18% Similarity=0.127 Sum_probs=27.0
Q ss_pred cchhhhhcccCcceEEecCCchhHHHH---HHhCCCeeeccc
Q 046553 102 APQVLLLSHRAIGGFLTHCGWNSTLEG---VSAGVPLVTRPL 140 (232)
Q Consensus 102 ~pq~~lL~~~~~~~~I~hgG~~sv~ea---l~~GvP~i~~P~ 140 (232)
.+...++...+...++--||.||+.|+ +.+++|++++|.
T Consensus 82 ~~Rk~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 82 FARNFILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred chHHHHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 344455554444466777999987664 788999999884
No 157
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=76.86 E-value=55 Score=32.05 Aligned_cols=112 Identities=13% Similarity=0.033 Sum_probs=61.4
Q ss_pred EEecccchh---hhhcccCcceEEec---CC-chhHHHHHHhCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccC
Q 046553 97 IIRGWAPQV---LLLSHRAIGGFLTH---CG-WNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIK 169 (232)
Q Consensus 97 ~v~~~~pq~---~lL~~~~~~~~I~h---gG-~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~ 169 (232)
++.+++++. .+++.+++ |+.- -| ..++.|++++|+|-...|...+----+..+ .-|+.+++ .+
T Consensus 345 ~~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l--~~~llv~P------~d 414 (726)
T PRK14501 345 YFYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL--AEALLVNP------ND 414 (726)
T ss_pred EEeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhHHh--CcCeEECC------CC
Confidence 455677765 47778887 6543 24 447889999977522222211110001111 12555555 57
Q ss_pred HHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHhh
Q 046553 170 REKVKEAIEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQR 225 (232)
Q Consensus 170 ~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~~ 225 (232)
.+++.++|.++|.++.. ..+++..++.+.++ .-+....++++++.+...
T Consensus 415 ~~~la~ai~~~l~~~~~--e~~~r~~~~~~~v~-----~~~~~~w~~~~l~~l~~~ 463 (726)
T PRK14501 415 IEGIAAAIKRALEMPEE--EQRERMQAMQERLR-----RYDVHKWASDFLDELREA 463 (726)
T ss_pred HHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHHHH
Confidence 89999999999986521 22333333333332 234555666666666544
No 158
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=76.26 E-value=3.5 Score=36.54 Aligned_cols=99 Identities=11% Similarity=0.110 Sum_probs=54.4
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhh-hHHHH-hcCCCeEE-------------
Q 046553 34 SVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEE-GLEER-AKGRGFII------------- 98 (232)
Q Consensus 34 ~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~-~~~~~-~~~~nv~v------------- 98 (232)
.+++.+.||.+...+. .++++.+.+.++.++|.........+. +|. ++.-. .....+.-
T Consensus 3 ~i~~~~GGTGGHi~Pa--la~a~~l~~~g~~v~~vg~~~~~e~~l----~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 76 (352)
T PRK12446 3 KIVFTGGGSAGHVTPN--LAIIPYLKEDNWDISYIGSHQGIEKTI----IEKENIPYYSISSGKLRRYFDLKNIKDPFLV 76 (352)
T ss_pred eEEEEcCCcHHHHHHH--HHHHHHHHhCCCEEEEEECCCcccccc----CcccCCcEEEEeccCcCCCchHHHHHHHHHH
Confidence 4777777777754443 456777777889999987554432111 221 11000 00000000
Q ss_pred -ecccchhhhhcccCcceEEecCCchh---HHHHHHhCCCeeec
Q 046553 99 -RGWAPQVLLLSHRAIGGFLTHCGWNS---TLEGVSAGVPLVTR 138 (232)
Q Consensus 99 -~~~~pq~~lL~~~~~~~~I~hgG~~s---v~eal~~GvP~i~~ 138 (232)
..+.--..++..-+-.++|++||.-| ...|...|+|.++.
T Consensus 77 ~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 77 MKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEE
Confidence 00011112344333334999999886 88999999999874
No 159
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=74.48 E-value=34 Score=28.82 Aligned_cols=40 Identities=23% Similarity=0.164 Sum_probs=31.5
Q ss_pred EEecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecc
Q 046553 97 IIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRP 139 (232)
Q Consensus 97 ~v~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P 139 (232)
.+..-.+-..++.+++. +||-. .+.-.||+.+|+|++++-
T Consensus 186 ~~~~~~~~~~Ll~~s~~--Vvtin-StvGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 186 IIDDDVNLYELLEQSDA--VVTIN-STVGLEALLHGKPVIVFG 225 (269)
T ss_pred EECCCCCHHHHHHhCCE--EEEEC-CHHHHHHHHcCCceEEec
Confidence 34455677789999998 77765 457899999999999974
No 160
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=73.71 E-value=51 Score=30.84 Aligned_cols=64 Identities=14% Similarity=0.103 Sum_probs=42.1
Q ss_pred hHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHHHcCChhhHHHHHHHH
Q 046553 124 STLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRTR 195 (232)
Q Consensus 124 sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~ 195 (232)
++.||+++|.|++.+=-.+ =+..++. -.|..+++++ -....+..++.++..|++...++.++-.
T Consensus 381 v~IEAMa~glPvvAt~~GG----P~EiV~~~~tG~l~dp~~----e~~~~~a~~~~kl~~~p~l~~~~~~~G~ 445 (495)
T KOG0853|consen 381 VPIEAMACGLPVVATNNGG----PAEIVVHGVTGLLIDPGQ----EAVAELADALLKLRRDPELWARMGKNGL 445 (495)
T ss_pred eeHHHHhcCCCEEEecCCC----ceEEEEcCCcceeeCCch----HHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 6889999999999974321 1233344 4555555532 3344799999999999955555554433
No 161
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=73.22 E-value=29 Score=28.27 Aligned_cols=154 Identities=12% Similarity=0.061 Sum_probs=71.9
Q ss_pred HhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchh
Q 046553 26 WLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQV 105 (232)
Q Consensus 26 ~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~ 105 (232)
|++.. .++++.|..|..+ ..-+..|.+.+..+.+...... +.+.+.....++.+..--.+.
T Consensus 4 ~l~l~-gk~vlVvGgG~va-------~rk~~~Ll~~ga~VtVvsp~~~-----------~~l~~l~~~~~i~~~~~~~~~ 64 (205)
T TIGR01470 4 FANLE-GRAVLVVGGGDVA-------LRKARLLLKAGAQLRVIAEELE-----------SELTLLAEQGGITWLARCFDA 64 (205)
T ss_pred EEEcC-CCeEEEECcCHHH-------HHHHHHHHHCCCEEEEEcCCCC-----------HHHHHHHHcCCEEEEeCCCCH
Confidence 34443 4567777666555 2334555567888766543221 222221122345443222223
Q ss_pred hhhcccCcceEEecCCchhH-----HHHHHhCCCeeec--ccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHH
Q 046553 106 LLLSHRAIGGFLTHCGWNST-----LEGVSAGVPLVTR--PLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAI 177 (232)
Q Consensus 106 ~lL~~~~~~~~I~hgG~~sv-----~eal~~GvP~i~~--P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i 177 (232)
..+..+.+ +|..-|...+ .+|-..|+|+-++ |-..| +..-..+.+ ++-+-+.... ....-...+++.|
T Consensus 65 ~dl~~~~l--Vi~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~-f~~pa~~~~g~l~iaisT~G-~sP~la~~lr~~i 140 (205)
T TIGR01470 65 DILEGAFL--VIAATDDEELNRRVAHAARARGVPVNVVDDPELCS-FIFPSIVDRSPVVVAISSGG-AAPVLARLLRERI 140 (205)
T ss_pred HHhCCcEE--EEECCCCHHHHHHHHHHHHHcCCEEEECCCcccCe-EEEeeEEEcCCEEEEEECCC-CCcHHHHHHHHHH
Confidence 44666666 7777776533 3344567777332 22222 222222233 2323222211 0012233466666
Q ss_pred HHHHcCChhhHHHHHHHHHHHHHHHhh
Q 046553 178 EKLMDRGKQGEKRRKRTRQLGEIANRA 204 (232)
Q Consensus 178 ~~vl~d~~~~~~~~~~a~~l~~~~~~~ 204 (232)
++++. +....+-+.+.++...++..
T Consensus 141 e~~l~--~~~~~~~~~~~~~R~~~k~~ 165 (205)
T TIGR01470 141 ETLLP--PSLGDLATLAATWRDAVKKR 165 (205)
T ss_pred HHhcc--hhHHHHHHHHHHHHHHHHhh
Confidence 66664 23345666666666666654
No 162
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=72.08 E-value=87 Score=29.31 Aligned_cols=109 Identities=17% Similarity=0.117 Sum_probs=68.1
Q ss_pred eEEecccchh---hhhcccCcceEEe--cCCchhH-HHHHHhCC----CeeecccccchhHHHHHHHh-hhhhcccccCC
Q 046553 96 FIIRGWAPQV---LLLSHRAIGGFLT--HCGWNST-LEGVSAGV----PLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKS 164 (232)
Q Consensus 96 v~v~~~~pq~---~lL~~~~~~~~I~--hgG~~sv-~eal~~Gv----P~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~ 164 (232)
+++.+.+|.. .++..+++ ++|| +-|.|.+ .|.++++. |+|+=-+.+ |. +. .-++.+++
T Consensus 364 ~~~~~~v~~~el~alYr~ADV-~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaG-----aa--~~l~~AllVNP--- 432 (487)
T TIGR02398 364 QFFTRSLPYEEVSAWFAMADV-MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAG-----AA--VELKGALLTNP--- 432 (487)
T ss_pred EEEcCCCCHHHHHHHHHhCCE-EEECccccccCcchhhHHhhhcCCCCCEEEecccc-----ch--hhcCCCEEECC---
Confidence 4556677765 46777887 2333 3477755 48888877 444432211 11 22 33455665
Q ss_pred CcccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHhh
Q 046553 165 GLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQR 225 (232)
Q Consensus 165 ~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~~ 225 (232)
.+.+++.++|.++|+.+. ++-+++.+++.+.++ .-......+.+++.|...
T Consensus 433 ---~d~~~~A~ai~~AL~m~~--~Er~~R~~~l~~~v~-----~~d~~~W~~~fl~~l~~~ 483 (487)
T TIGR02398 433 ---YDPVRMDETIYVALAMPK--AEQQARMREMFDAVN-----YYDVQRWADEFLAAVSPQ 483 (487)
T ss_pred ---CCHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHhhhc
Confidence 679999999999999762 245666777777665 234566777787776543
No 163
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=71.64 E-value=37 Score=25.77 Aligned_cols=39 Identities=21% Similarity=0.032 Sum_probs=31.0
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcC
Q 046553 32 PWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRG 71 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~ 71 (232)
...+|++++|+......+.+.++++.+. .+.++++....
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~~ 88 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNPH 88 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEECC
Confidence 4569999999999988888999998884 45787776554
No 164
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=71.21 E-value=15 Score=35.05 Aligned_cols=78 Identities=10% Similarity=0.041 Sum_probs=43.7
Q ss_pred hhhhcccCcceEEe-cCC-chhHHHHHHhCCCeeeccccc-chhHHHHHHHhh--hhhcccc-cCCCcccCHHHHHHHHH
Q 046553 105 VLLLSHRAIGGFLT-HCG-WNSTLEGVSAGVPLVTRPLFA-EQFYNDKLAVQA--AVTWGLE-DKSGLVIKREKVKEAIE 178 (232)
Q Consensus 105 ~~lL~~~~~~~~I~-hgG-~~sv~eal~~GvP~i~~P~~~-DQ~~nA~~v~~G--~g~~~~~-~~~~~~~~~~~l~~~i~ 178 (232)
..++..|++.++-+ +=| .-++.||+++|+|+|.....+ ..... ..+..+ .|+.+.. ...+..-+.+++.+++.
T Consensus 469 ~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~ 547 (590)
T cd03793 469 EEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHIEDPESYGIYIVDRRFKSPDESVQQLTQYMY 547 (590)
T ss_pred HHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHhccCCCceEEEecCCccchHHHHHHHHHHHH
Confidence 46777788833322 334 448999999999999987532 11111 222221 4554432 11011134566788888
Q ss_pred HHHcC
Q 046553 179 KLMDR 183 (232)
Q Consensus 179 ~vl~d 183 (232)
+++..
T Consensus 548 ~~~~~ 552 (590)
T cd03793 548 EFCQL 552 (590)
T ss_pred HHhCC
Confidence 87753
No 165
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=70.24 E-value=49 Score=26.41 Aligned_cols=33 Identities=12% Similarity=0.070 Sum_probs=23.3
Q ss_pred hhhcccCcceEEecCCchhHHHHHH---------hCCCeeec
Q 046553 106 LLLSHRAIGGFLTHCGWNSTLEGVS---------AGVPLVTR 138 (232)
Q Consensus 106 ~lL~~~~~~~~I~hgG~~sv~eal~---------~GvP~i~~ 138 (232)
.+|...+-.+++--||.||+-|.+. +.+|++++
T Consensus 91 ~~m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~ 132 (178)
T TIGR00730 91 AMMAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILF 132 (178)
T ss_pred HHHHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEE
Confidence 4444444446777899999999844 38898886
No 166
>TIGR00075 hypD hydrogenase expression/formation protein HypD. HypD is involved in the hyp operon which is needed for the activity of the three hydrogenase isoenzymes in Escherichia coli. HypD is one of the genes needed for formation of these enzymes. This protein has been found in gram-negative and gram-positive bacteria and Archaea.
Probab=68.17 E-value=45 Score=29.88 Aligned_cols=40 Identities=13% Similarity=-0.020 Sum_probs=21.4
Q ss_pred hhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhh
Q 046553 20 DEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEA 60 (232)
Q Consensus 20 ~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~ 60 (232)
.-+..+.-...+++.+||++-|=-+.. +.....+.++..+
T Consensus 124 pldAl~iA~~nPdk~VVF~avGFETTa-P~~A~~i~~a~~~ 163 (369)
T TIGR00075 124 PMDALKIAKENPDRKVVFFAIGFETTA-PTTASTLLSAKAE 163 (369)
T ss_pred HHHHHHHHHHCCCCeEEEEecCchhcc-HHHHHHHHHHHHc
Confidence 334455556667788888776644321 3333334454443
No 167
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=65.51 E-value=31 Score=28.09 Aligned_cols=151 Identities=9% Similarity=-0.048 Sum_probs=72.5
Q ss_pred HhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchh
Q 046553 26 WLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQV 105 (232)
Q Consensus 26 ~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~ 105 (232)
|++.. .++++.|..|.++ ...+..|...+..+.+... . +.+.+.+......+.........
T Consensus 5 ~l~l~-~k~vLVIGgG~va-------~~ka~~Ll~~ga~V~VIs~-~----------~~~~l~~l~~~~~i~~~~~~~~~ 65 (202)
T PRK06718 5 MIDLS-NKRVVIVGGGKVA-------GRRAITLLKYGAHIVVISP-E----------LTENLVKLVEEGKIRWKQKEFEP 65 (202)
T ss_pred EEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCeEEEEcC-C----------CCHHHHHHHhCCCEEEEecCCCh
Confidence 44443 4667777666655 3344555566777665532 2 11222222222334443333334
Q ss_pred hhhcccCcceEEecCCchhHHHHHH----hCCCeeecccccchhHHH-----HHHHh-hhhhcccccCCCcccCHHHHHH
Q 046553 106 LLLSHRAIGGFLTHCGWNSTLEGVS----AGVPLVTRPLFAEQFYND-----KLAVQ-AAVTWGLEDKSGLVIKREKVKE 175 (232)
Q Consensus 106 ~lL~~~~~~~~I~hgG~~sv~eal~----~GvP~i~~P~~~DQ~~nA-----~~v~~-G~g~~~~~~~~~~~~~~~~l~~ 175 (232)
..+..+++ +|.--+...+.+.++ .++|+-+ .|.+..+ ..+.+ ++-+-+.... ....-...|++
T Consensus 66 ~~l~~adl--ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~~~g~l~iaIsT~G-~sP~la~~lr~ 138 (202)
T PRK06718 66 SDIVDAFL--VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSALHRGKLTISVSTDG-ASPKLAKKIRD 138 (202)
T ss_pred hhcCCceE--EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEEEcCCeEEEEECCC-CChHHHHHHHH
Confidence 45666666 777666555544443 4444333 2332222 22233 3333232221 00122234566
Q ss_pred HHHHHHcCChhhHHHHHHHHHHHHHHHhh
Q 046553 176 AIEKLMDRGKQGEKRRKRTRQLGEIANRA 204 (232)
Q Consensus 176 ~i~~vl~d~~~~~~~~~~a~~l~~~~~~~ 204 (232)
.|+.++ ++....+-+.+.++...++..
T Consensus 139 ~ie~~~--~~~~~~~~~~~~~~R~~~k~~ 165 (202)
T PRK06718 139 ELEALY--DESYESYIDFLYECRQKIKEL 165 (202)
T ss_pred HHHHHc--chhHHHHHHHHHHHHHHHHHh
Confidence 666655 345556777777777777754
No 168
>PLN02470 acetolactate synthase
Probab=64.92 E-value=26 Score=33.29 Aligned_cols=91 Identities=14% Similarity=0.084 Sum_probs=55.0
Q ss_pred EeCCCCCCC--HHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccch---------hhh
Q 046553 39 CLGSICGLA--TWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQ---------VLL 107 (232)
Q Consensus 39 s~GS~~~~~--~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq---------~~l 107 (232)
+|||-...+ ......+++.|.+.|.+.++.+.+..... +-+.+. ..+++.++. ..+ -.-
T Consensus 2 ~~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~~~~~------l~dal~---~~~~i~~i~-~rhE~~A~~~Adgya 71 (585)
T PLN02470 2 TFQSRFAPDEPRKGADILVEALEREGVDTVFAYPGGASME------IHQALT---RSNCIRNVL-CRHEQGEVFAAEGYA 71 (585)
T ss_pred CcccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCcccHH------HHHHHh---ccCCceEEE-eccHHHHHHHHHHHH
Confidence 467777644 23356788889899999998887765311 112221 122343331 111 111
Q ss_pred hcccCcceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 108 LSHRAIGGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 108 L~~~~~~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
......+++++|.|.| .+++|...++|+|++.
T Consensus 72 r~tg~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 72 KASGKVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred HHhCCCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 1222455688998854 7899999999999985
No 169
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=60.91 E-value=1.3e+02 Score=27.30 Aligned_cols=141 Identities=13% Similarity=0.172 Sum_probs=77.9
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEeccc-------ch
Q 046553 32 PWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWA-------PQ 104 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~-------pq 104 (232)
.+.+++...||.... ....+++.|.+.++.+-..+.... .+|+-|..+.. .....++..-|- ++
T Consensus 6 ~k~IllgvTGsiaa~---k~~~lv~~L~~~g~~V~vv~T~~A-----~~fi~~~~l~~-l~~~~V~~~~~~~~~~~~~~h 76 (399)
T PRK05579 6 GKRIVLGVSGGIAAY---KALELVRRLRKAGADVRVVMTEAA-----KKFVTPLTFQA-LSGNPVSTDLWDPAAEAAMGH 76 (399)
T ss_pred CCeEEEEEeCHHHHH---HHHHHHHHHHhCCCEEEEEECHhH-----HHHHhHHHHHH-hhCCceEccccccccCCCcch
Confidence 355777777777642 345567777777877665554332 22322333322 222223322222 23
Q ss_pred hhhhcccCcceEEecCCchhHHHH-------------HHhCCCeeecccccc-------hhHHHHHHHh-hhhhccccc-
Q 046553 105 VLLLSHRAIGGFLTHCGWNSTLEG-------------VSAGVPLVTRPLFAE-------QFYNDKLAVQ-AAVTWGLED- 162 (232)
Q Consensus 105 ~~lL~~~~~~~~I~hgG~~sv~ea-------------l~~GvP~i~~P~~~D-------Q~~nA~~v~~-G~g~~~~~~- 162 (232)
..+...+++ .+|.-|-+||+.-. +.+++|++++|-... -..|-.++.+ |+-+.-...
T Consensus 77 i~l~~~aD~-~vVaPaTaNtlaKiA~GiaDnllt~~~la~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~~g 155 (399)
T PRK05579 77 IELAKWADL-VLIAPATADLIAKLAHGIADDLLTTTLLATTAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPASG 155 (399)
T ss_pred hhcccccCE-EEEeeCCHHHHHHHHcccCCcHHHHHHHhcCCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCCCc
Confidence 344444554 67777877766543 566899999994332 2456667776 765532210
Q ss_pred ------CC-CcccCHHHHHHHHHHHHc
Q 046553 163 ------KS-GLVIKREKVKEAIEKLMD 182 (232)
Q Consensus 163 ------~~-~~~~~~~~l~~~i~~vl~ 182 (232)
.. +.-.++++|...+.+.+.
T Consensus 156 ~la~~~~g~gr~~~~~~I~~~~~~~~~ 182 (399)
T PRK05579 156 RLACGDVGPGRMAEPEEIVAAAERALS 182 (399)
T ss_pred cccCCCcCCCCCCCHHHHHHHHHHHhh
Confidence 00 223677888888877764
No 170
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=60.81 E-value=19 Score=30.78 Aligned_cols=53 Identities=13% Similarity=0.050 Sum_probs=36.4
Q ss_pred ccCcceEEecCCchhHHHHHH------hCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcC
Q 046553 110 HRAIGGFLTHCGWNSTLEGVS------AGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 110 ~~~~~~~I~hgG~~sv~eal~------~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d 183 (232)
.+++ +|+-||-||+..++. .++|++.+... .+|... + .+++++.+.+++++++
T Consensus 35 ~~Dl--vi~iGGDGT~L~a~~~~~~~~~~iPilGIN~G------------~lGFL~---~----~~~~~~~~~l~~i~~g 93 (265)
T PRK04885 35 NPDI--VISVGGDGTLLSAFHRYENQLDKVRFVGVHTG------------HLGFYT---D----WRPFEVDKLVIALAKD 93 (265)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcccCCCCeEEEEeCC------------Cceecc---c----CCHHHHHHHHHHHHcC
Confidence 3455 999999999999975 47888887531 122221 1 5677777788777763
No 171
>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.07 E-value=1.2e+02 Score=26.57 Aligned_cols=91 Identities=18% Similarity=0.208 Sum_probs=51.0
Q ss_pred CCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhh-hhhhhHH-H--HhcCCCeEEecccchh---hhhcccCcceEE
Q 046553 45 GLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKW-IQEEGLE-E--RAKGRGFIIRGWAPQV---LLLSHRAIGGFL 117 (232)
Q Consensus 45 ~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~-~lp~~~~-~--~~~~~nv~v~~~~pq~---~lL~~~~~~~~I 117 (232)
+..+..+..+++.+++.+.+++..+.+........++ ..+..-. . ...+-.+...+|+||. .+|-.|++ -+
T Consensus 185 aY~npa~~s~ieq~r~a~~p~llL~~e~~~~~~~~~~~~~~~~a~Gdv~~~~~lrvvklPFvpqddyd~LL~lcD~--n~ 262 (370)
T COG4394 185 AYENPALPSWIEQLRKADKPILLLIPEGKTQANFAKYFDNNNNADGDVFQTAKLRVVKLPFVPQDDYDELLWLCDF--NL 262 (370)
T ss_pred ccCCcchHHHHHHHHhcCCCEEEEcccchHHHHHHHHcCCCcccccchhcccceEEEEecCCcHhHHHHHHHhccc--ce
Confidence 3345556667777777777777666544322111111 0000000 0 0012234556899986 47878887 44
Q ss_pred ecCCchhHHHHHHhCCCeeec
Q 046553 118 THCGWNSTLEGVSAGVPLVTR 138 (232)
Q Consensus 118 ~hgG~~sv~eal~~GvP~i~~ 138 (232)
-+ |--|+.-|..+|+|.+=-
T Consensus 263 VR-GEDSFVRAq~agkPflWH 282 (370)
T COG4394 263 VR-GEDSFVRAQLAGKPFLWH 282 (370)
T ss_pred ee-cchHHHHHHHcCCCcEEE
Confidence 44 567999999999998753
No 172
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=59.65 E-value=80 Score=26.87 Aligned_cols=100 Identities=17% Similarity=0.145 Sum_probs=50.0
Q ss_pred CcEEEEEeCCCCCCCHHHHHHH---HHHHh-hCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchh--h
Q 046553 33 WSVIYACLGSICGLATWQLLEL---GLGLE-ASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQV--L 106 (232)
Q Consensus 33 ~~vV~vs~GS~~~~~~~~~~~l---~~~l~-~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~--~ 106 (232)
++.|.++.........+....+ +..+. +.++++++..-... .| .+ .-+.+......+...+...-|+. .
T Consensus 172 ~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~-~D--~~--~~~~l~~~~~~~~~i~~~~~~~e~~~ 246 (298)
T TIGR03609 172 EPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQP-QD--LP--LARALRDQLLGPAEVLSPLDPEELLG 246 (298)
T ss_pred CCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcc-hh--HH--HHHHHHHhcCCCcEEEecCCHHHHHH
Confidence 5677777755322333333333 34433 34777766542211 11 11 22334333322222232222332 4
Q ss_pred hhcccCcceEEecCCchhHHHHHHhCCCeeeccc
Q 046553 107 LLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPL 140 (232)
Q Consensus 107 lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~ 140 (232)
+++++++ +|+-==+ +..-|+.+|+|.+.+++
T Consensus 247 ~i~~~~~--vI~~RlH-~~I~A~~~gvP~i~i~y 277 (298)
T TIGR03609 247 LFASARL--VIGMRLH-ALILAAAAGVPFVALSY 277 (298)
T ss_pred HHhhCCE--EEEechH-HHHHHHHcCCCEEEeec
Confidence 6777776 7774322 35558899999998853
No 173
>COG0409 HypD Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=58.04 E-value=1e+02 Score=27.39 Aligned_cols=27 Identities=15% Similarity=0.079 Sum_probs=18.9
Q ss_pred hhhHHHHhcCCCCCcEEEEEeCCCCCC
Q 046553 20 DEQCLKWLDSWEPWSVIYACLGSICGL 46 (232)
Q Consensus 20 ~~~l~~~l~~~~~~~vV~vs~GS~~~~ 46 (232)
.-+..+.-...+++.+||++.|=-+..
T Consensus 120 ~~dal~iA~enpdk~VVffaiGFETT~ 146 (364)
T COG0409 120 PMDALKIAKENPDKKVVFFAIGFETTT 146 (364)
T ss_pred HHHHHHHHhhCCCCceEEEeCccccCC
Confidence 345556666777889999988755543
No 174
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=57.24 E-value=91 Score=24.29 Aligned_cols=27 Identities=15% Similarity=0.236 Sum_probs=21.7
Q ss_pred cceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 113 IGGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 113 ~~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
..++++|.|.| .+.+|...++|+|++.
T Consensus 64 ~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 64 LGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 33488887754 7889999999999996
No 175
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=55.88 E-value=1.6e+02 Score=26.63 Aligned_cols=146 Identities=14% Similarity=0.136 Sum_probs=86.8
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHHHhh---------CCC-cEEEEEcCCCCCccchhhhhhhhHHHHhcC---CCe-
Q 046553 31 EPWSVIYACLGSICGLATWQLLELGLGLEA---------SSQ-PFIWVIRGGERSQGLEKWIQEEGLEERAKG---RGF- 96 (232)
Q Consensus 31 ~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~---------~~~-~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~---~nv- 96 (232)
+++|.++||.-|- .+.+.+..+++|+.. .++ .++..++++.+ +.+.+.+.... .++
T Consensus 252 ~~~pallvsSTsw--TpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP--------lkE~Y~~~I~~~~~~~v~ 321 (444)
T KOG2941|consen 252 PERPALLVSSTSW--TPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP--------LKEKYSQEIHEKNLQHVQ 321 (444)
T ss_pred cCCCeEEEecCCC--CCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc--------hhHHHHHHHHHhccccee
Confidence 4577888864332 235556667777651 122 45555555443 33444443332 233
Q ss_pred EEecccc---hhhhhcccCcceEEecCCch-----hHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcc
Q 046553 97 IIRGWAP---QVLLLSHRAIGGFLTHCGWN-----STLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLV 167 (232)
Q Consensus 97 ~v~~~~p---q~~lL~~~~~~~~I~hgG~~-----sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~ 167 (232)
+...|.. ...+|..+++++.+|-...| -|..-.-+|+|.+.+-+. --...|.+ --|+..
T Consensus 322 ~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fk----cl~ELVkh~eNGlvF-------- 389 (444)
T KOG2941|consen 322 VCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFK----CLDELVKHGENGLVF-------- 389 (444)
T ss_pred eeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecch----hHHHHHhcCCCceEe--------
Confidence 2345753 44689999998888877655 466667778888876431 11233344 333332
Q ss_pred cCHHHHHHHHHHHHc----CChhhHHHHHHHHHHH
Q 046553 168 IKREKVKEAIEKLMD----RGKQGEKRRKRTRQLG 198 (232)
Q Consensus 168 ~~~~~l~~~i~~vl~----d~~~~~~~~~~a~~l~ 198 (232)
-+.+++.+.+.-++. |.+...++++|+++-+
T Consensus 390 ~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~ 424 (444)
T KOG2941|consen 390 EDSEELAEQLQMLFKNFPDNADELNQLKKNLREEQ 424 (444)
T ss_pred ccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHHH
Confidence 247788888888888 5677778888887753
No 176
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=55.64 E-value=30 Score=29.91 Aligned_cols=53 Identities=4% Similarity=-0.071 Sum_probs=36.5
Q ss_pred ccCcceEEecCCchhHHHHHH----hCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcC
Q 046553 110 HRAIGGFLTHCGWNSTLEGVS----AGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 110 ~~~~~~~I~hgG~~sv~eal~----~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d 183 (232)
.+++ +|+-||-||+..++. .++|++.+-.. .+|. ..+ ++.+++..++++++.+
T Consensus 64 ~~Dl--vi~iGGDGT~L~aa~~~~~~~~PilGIN~G------------~lGF---Lt~----~~~~~~~~~l~~i~~g 120 (287)
T PRK14077 64 ISDF--LISLGGDGTLISLCRKAAEYDKFVLGIHAG------------HLGF---LTD----ITVDEAEKFFQAFFQG 120 (287)
T ss_pred CCCE--EEEECCCHHHHHHHHHhcCCCCcEEEEeCC------------Cccc---CCc----CCHHHHHHHHHHHHcC
Confidence 4566 999999999987755 36788877431 1222 222 5678888888888764
No 177
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=55.58 E-value=28 Score=30.14 Aligned_cols=53 Identities=15% Similarity=0.109 Sum_probs=37.1
Q ss_pred ccCcceEEecCCchhHHHHHHh----CCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcC
Q 046553 110 HRAIGGFLTHCGWNSTLEGVSA----GVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 110 ~~~~~~~I~hgG~~sv~eal~~----GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d 183 (232)
.+++ +|+-||-||+.+++.. ++|++.+-.. .+|... + ++.+++.+++.++++.
T Consensus 63 ~~d~--vi~~GGDGt~l~~~~~~~~~~~pilGIn~G------------~lGFL~---~----~~~~~~~~~l~~~~~g 119 (291)
T PRK02155 63 RADL--AVVLGGDGTMLGIGRQLAPYGVPLIGINHG------------RLGFIT---D----IPLDDMQETLPPMLAG 119 (291)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEcCC------------Cccccc---c----CCHHHHHHHHHHHHcC
Confidence 4555 9999999999999763 6787777421 223322 1 6678888888888763
No 178
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=55.05 E-value=9.4 Score=30.25 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=21.2
Q ss_pred ccCcceEEecCCchhHHHHHHhCCCeeeccccc
Q 046553 110 HRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFA 142 (232)
Q Consensus 110 ~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~ 142 (232)
+....++|++||...+..... ++|++-+|..+
T Consensus 32 ~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~ 63 (176)
T PF06506_consen 32 SEGADVIISRGGTAELLRKHV-SIPVVEIPISG 63 (176)
T ss_dssp TTT-SEEEEEHHHHHHHHCC--SS-EEEE---H
T ss_pred hcCCeEEEECCHHHHHHHHhC-CCCEEEECCCH
Confidence 344455999999988888877 99999999743
No 179
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=54.16 E-value=1.1e+02 Score=24.41 Aligned_cols=139 Identities=14% Similarity=0.114 Sum_probs=68.8
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccc-------hhh
Q 046553 34 SVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAP-------QVL 106 (232)
Q Consensus 34 ~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~p-------q~~ 106 (232)
.+++...||.+.. ....+++.|.+.++.+-....... .+| +.....+......++...|.+ +..
T Consensus 3 ~Ill~vtGsiaa~---~~~~li~~L~~~g~~V~vv~T~~A-----~~f-i~~~~l~~l~~~~v~~~~~~~~~~~~~~hi~ 73 (182)
T PRK07313 3 NILLAVSGSIAAY---KAADLTSQLTKRGYQVTVLMTKAA-----TKF-ITPLTLQVLSKNPVHLDVMDEHDPKLMNHIE 73 (182)
T ss_pred EEEEEEeChHHHH---HHHHHHHHHHHCCCEEEEEEChhH-----HHH-cCHHHHHHHhCCceEeccccccccCCccccc
Confidence 3566666666642 244566667666776655554322 123 221111222222333322321 222
Q ss_pred hhcccCcceEEecCCchhHHHH-------------HHh--CCCeeeccccc----ch---hHHHHHHHh-hhhhcccccC
Q 046553 107 LLSHRAIGGFLTHCGWNSTLEG-------------VSA--GVPLVTRPLFA----EQ---FYNDKLAVQ-AAVTWGLEDK 163 (232)
Q Consensus 107 lL~~~~~~~~I~hgG~~sv~ea-------------l~~--GvP~i~~P~~~----DQ---~~nA~~v~~-G~g~~~~~~~ 163 (232)
+...+++ .+|.-|-+||+.-. +.. ++|+++.|-.. .. ..|..++.+ |+-+.-....
T Consensus 74 l~~~aD~-~vIaPaTantlakiA~GiaDnllt~~~~a~~~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~~g 152 (182)
T PRK07313 74 LAKRADL-FLVAPATANTIAKLAHGIADDLVTSVALALPATTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPKEG 152 (182)
T ss_pred cccccCE-EEEeeCCHhHHHHHHccccCcHHHHHHHHcCCCCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCCCC
Confidence 2233333 56777766655432 444 89999999532 22 456666766 7555322210
Q ss_pred --------CCcccCHHHHHHHHHHHHc
Q 046553 164 --------SGLVIKREKVKEAIEKLMD 182 (232)
Q Consensus 164 --------~~~~~~~~~l~~~i~~vl~ 182 (232)
-+.-.+.+++...+.+.+.
T Consensus 153 ~la~~~~g~g~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 153 LLACGDEGYGALADIETILETIENTLK 179 (182)
T ss_pred ccccCCccCCCCCCHHHHHHHHHHHhc
Confidence 0223566777777766554
No 180
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=53.64 E-value=30 Score=30.44 Aligned_cols=101 Identities=15% Similarity=0.155 Sum_probs=56.0
Q ss_pred CCCeEEe-cccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHhhhhhccccc-CCCcccCH
Q 046553 93 GRGFIIR-GWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLED-KSGLVIKR 170 (232)
Q Consensus 93 ~~nv~v~-~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~-~~~~~~~~ 170 (232)
..++... ...+-..+|..+++ +||-- .+.+.|.++.++|+|....-.|.....+ |.-.-.... .+...-+.
T Consensus 251 ~~~i~~~~~~~~~~~ll~~aDi--LITDy-SSi~fD~~~l~KPiify~~D~~~Y~~~r----g~~~~~~~~~pg~~~~~~ 323 (369)
T PF04464_consen 251 NSNIIFVSDNEDIYDLLAAADI--LITDY-SSIIFDFLLLNKPIIFYQPDLEEYEKER----GFYFDYEEDLPGPIVYNF 323 (369)
T ss_dssp TTTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTTS----SBSS-TTTSSSS-EESSH
T ss_pred CCcEEECCCCCCHHHHHHhcCE--EEEec-hhHHHHHHHhCCCEEEEeccHHHHhhcc----CCCCchHhhCCCceeCCH
Confidence 4566553 33456689999998 99987 5588999999999998765444432211 322211000 00113467
Q ss_pred HHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHh
Q 046553 171 EKVKEAIEKLMDRGKQGEKRRKRTRQLGEIANR 203 (232)
Q Consensus 171 ~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~~~ 203 (232)
++|..+|..++.++ ..++++.++..+++-.
T Consensus 324 ~eL~~~i~~~~~~~---~~~~~~~~~~~~~~~~ 353 (369)
T PF04464_consen 324 EELIEAIENIIENP---DEYKEKREKFRDKFFK 353 (369)
T ss_dssp HHHHHHHTTHHHHH---HHTHHHHHHHHHHHST
T ss_pred HHHHHHHHhhhhCC---HHHHHHHHHHHHHhCC
Confidence 88999999988754 2344455555666643
No 181
>PRK15062 hydrogenase isoenzymes formation protein HypD; Provisional
Probab=53.36 E-value=66 Score=28.84 Aligned_cols=50 Identities=12% Similarity=-0.021 Sum_probs=26.5
Q ss_pred hhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEc
Q 046553 20 DEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIR 70 (232)
Q Consensus 20 ~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~ 70 (232)
.-+..+.-...+++.+||++-|=-+.. +.....+.++..+....|-+...
T Consensus 118 pldAl~iA~~nP~k~vVF~avGFETTa-P~~A~~i~~A~~~~~~Nfsvl~~ 167 (364)
T PRK15062 118 PLDALKIARENPDKEVVFFAIGFETTA-PATAATLLQAKAEGLKNFSVLSS 167 (364)
T ss_pred HHHHHHHHHHCCCCeEEEEecCchhcc-HHHHHHHHHHHHcCCCCEEEEEe
Confidence 344555666677788888776544321 33334455555444444444443
No 182
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=53.07 E-value=36 Score=29.54 Aligned_cols=53 Identities=15% Similarity=0.349 Sum_probs=37.7
Q ss_pred ccCcceEEecCCchhHHHHHH----hCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcC
Q 046553 110 HRAIGGFLTHCGWNSTLEGVS----AGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 110 ~~~~~~~I~hgG~~sv~eal~----~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d 183 (232)
.+++ +|+=||-||+..++. .++|++.+-. |-..-..+ ++++++.+++++++++
T Consensus 64 ~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGIN~---------------G~lGFLt~----~~~~~~~~~l~~i~~g 120 (292)
T PRK01911 64 SADM--VISIGGDGTFLRTATYVGNSNIPILGINT---------------GRLGFLAT----VSKEEIEETIDELLNG 120 (292)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEec---------------CCCCcccc----cCHHHHHHHHHHHHcC
Confidence 4566 999999999998876 3688888743 22222222 6678888888888874
No 183
>TIGR00732 dprA DNA protecting protein DprA. Disruption of this gene in both Haemophilus influenzae and Helicobacter pylori drastically reduces the efficiency of transformation with exogenous DNA, but with different levels of effect on chromosomal (linear) and plasmid (circular) DNA. This difference suggests the DprA is not active in recombination, and it has been shown not to affect DNA binding, leaving the intermediate step in natural transformation, DNA processing. In Strep. pneumoniae, inactivation of dprA had no effect on the uptake of DNA. All of these data indicated that DprA is required at a later stage in transformation. Subsequently DprA and RecA were both shown in S. pneumoniae to be required to protect incoming ssDNA from immediate degradation. Role of DprA in non-transformable species is not known. The gene symbol smf was assigned in E. coli, but without assignment of function.
Probab=52.86 E-value=1.2e+02 Score=24.98 Aligned_cols=52 Identities=13% Similarity=0.020 Sum_probs=30.6
Q ss_pred hhcccCcceEEecCC-----chhHHHHHHhCCCeeecccccch--hH-HHHHHHhhhhhc
Q 046553 107 LLSHRAIGGFLTHCG-----WNSTLEGVSAGVPLVTRPLFAEQ--FY-NDKLAVQAAVTW 158 (232)
Q Consensus 107 lL~~~~~~~~I~hgG-----~~sv~eal~~GvP~i~~P~~~DQ--~~-nA~~v~~G~g~~ 158 (232)
+++..+..++|.-++ ..+...|+..|+|+.++|-..+. .. |...+.+|+...
T Consensus 151 iia~ls~~vivve~~~~sGtl~ta~~A~~~gr~v~~~pg~~~~~~~~G~~~Li~~GA~~i 210 (220)
T TIGR00732 151 IISGLSRAVLVVEAPLKSGALITARYALEQGREVFAYPGDLNSPESDGCHKLIEQGAALI 210 (220)
T ss_pred HHHHhcCEEEEEECCCCCchHHHHHHHHHhCCcEEEEcCCCCCccchHHHHHHHCCCEEE
Confidence 444333334555544 45667778999999999965442 22 334444386543
No 184
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=52.48 E-value=34 Score=29.84 Aligned_cols=53 Identities=17% Similarity=0.171 Sum_probs=37.4
Q ss_pred ccCcceEEecCCchhHHHHHHh----CCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcC
Q 046553 110 HRAIGGFLTHCGWNSTLEGVSA----GVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 110 ~~~~~~~I~hgG~~sv~eal~~----GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d 183 (232)
.+++ +|+=||-||+..++.. ++|++.+-.. .+|. ..+ ++.+++.+++++++++
T Consensus 68 ~~Dl--vi~iGGDGTlL~aar~~~~~~iPilGIN~G------------~lGF---Lt~----~~~~~~~~~l~~l~~g 124 (305)
T PRK02649 68 SMKF--AIVLGGDGTVLSAARQLAPCGIPLLTINTG------------HLGF---LTE----AYLNQLDEAIDQVLAG 124 (305)
T ss_pred CcCE--EEEEeCcHHHHHHHHHhcCCCCcEEEEeCC------------CCcc---ccc----CCHHHHHHHHHHHHcC
Confidence 4555 9999999999998764 7888888431 1222 221 5678888888888874
No 185
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=52.37 E-value=90 Score=26.91 Aligned_cols=26 Identities=4% Similarity=0.164 Sum_probs=22.9
Q ss_pred cceEEecCCchhHHHHHHhCCCeeec
Q 046553 113 IGGFLTHCGWNSTLEGVSAGVPLVTR 138 (232)
Q Consensus 113 ~~~~I~hgG~~sv~eal~~GvP~i~~ 138 (232)
-.++|+.++..+..-|-..|+|.|.+
T Consensus 94 pDlVi~d~~~~~~~aA~~~~iP~i~i 119 (321)
T TIGR00661 94 PDLIISDFEYSTVVAAKLLKIPVICI 119 (321)
T ss_pred CCEEEECCchHHHHHHHhcCCCEEEE
Confidence 34499999999999999999999965
No 186
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=52.00 E-value=35 Score=29.28 Aligned_cols=75 Identities=17% Similarity=0.238 Sum_probs=52.7
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchhhhhcccCcceEEecCCchhHH
Q 046553 47 ATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTL 126 (232)
Q Consensus 47 ~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~hgG~~sv~ 126 (232)
..+....+.+++.......||.+.+.... .++.++++...+-.+|.. |+-+....+++
T Consensus 47 ~~~Ra~dL~~a~~d~~i~aI~~~rGG~ga--------------------~rlL~~ld~~~~~~~pK~--~iGySDiTaL~ 104 (282)
T cd07025 47 DEERAADLNAAFADPEIKAIWCARGGYGA--------------------NRLLPYLDYDLIRANPKI--FVGYSDITALH 104 (282)
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCcCCH--------------------HHhhhhCCHHHHhhCCeE--EEEecHHHHHH
Confidence 46668889999999999999998876532 122344544444456665 88888888888
Q ss_pred HHHHh--CCCeeecccccc
Q 046553 127 EGVSA--GVPLVTRPLFAE 143 (232)
Q Consensus 127 eal~~--GvP~i~~P~~~D 143 (232)
-+++. |++.+--|+..+
T Consensus 105 ~~l~~~~g~~t~hGp~~~~ 123 (282)
T cd07025 105 LALYAKTGLVTFHGPMLAS 123 (282)
T ss_pred HHHHHhcCceEEECccccc
Confidence 87764 778877776543
No 187
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=50.79 E-value=82 Score=24.64 Aligned_cols=26 Identities=23% Similarity=0.355 Sum_probs=21.0
Q ss_pred ceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 114 GGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 114 ~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
+++++|+|.| .+++|...++|+|++.
T Consensus 62 gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 93 (162)
T cd07037 62 VAVVCTSGTAVANLLPAVVEAYYSGVPLLVLT 93 (162)
T ss_pred EEEEECCchHHHHHhHHHHHHHhcCCCEEEEE
Confidence 3378888744 7789999999999995
No 188
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=50.22 E-value=39 Score=26.66 Aligned_cols=29 Identities=31% Similarity=0.216 Sum_probs=23.6
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHhhCCC
Q 046553 35 VIYACLGSICGLATWQLLELGLGLEASSQ 63 (232)
Q Consensus 35 vV~vs~GS~~~~~~~~~~~l~~~l~~~~~ 63 (232)
.+|+++||........+...+.++.+.+.
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~ 31 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALAD 31 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCC
Confidence 78999999998767778888888877653
No 189
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=49.49 E-value=42 Score=26.47 Aligned_cols=34 Identities=24% Similarity=0.179 Sum_probs=24.0
Q ss_pred cCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhC
Q 046553 28 DSWEPWSVIYACLGSICGLATWQLLELGLGLEAS 61 (232)
Q Consensus 28 ~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~ 61 (232)
+..+.+..+|+++||........+...+..+...
T Consensus 2 ~~~~~~~~v~i~LGSNlg~~~~~l~~A~~~L~~~ 35 (163)
T PRK14092 2 NGSPASALAYVGLGANLGDAAATLRSVLAELAAA 35 (163)
T ss_pred CCCCcCCEEEEEecCchHhHHHHHHHHHHHHHhC
Confidence 4456677899999999864555666666666553
No 190
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=46.86 E-value=46 Score=28.93 Aligned_cols=53 Identities=13% Similarity=0.085 Sum_probs=37.1
Q ss_pred ccCcceEEecCCchhHHHHHH----hCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcC
Q 046553 110 HRAIGGFLTHCGWNSTLEGVS----AGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 110 ~~~~~~~I~hgG~~sv~eal~----~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d 183 (232)
.+++ +|+=||-||+..++. .++|++.+-.. -+|.. .+ ++.+++.+++++++.+
T Consensus 68 ~~D~--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G------------~lGFL---~~----~~~~~~~~~l~~i~~g 124 (296)
T PRK04539 68 YCDL--VAVLGGDGTFLSVAREIAPRAVPIIGINQG------------HLGFL---TQ----IPREYMTDKLLPVLEG 124 (296)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcccCCCEEEEecC------------CCeEe---ec----cCHHHHHHHHHHHHcC
Confidence 4566 999999999999864 36898887421 12222 22 6678888888888864
No 191
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=46.19 E-value=49 Score=28.68 Aligned_cols=53 Identities=4% Similarity=0.045 Sum_probs=37.0
Q ss_pred ccCcceEEecCCchhHHHHHH----hCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcC
Q 046553 110 HRAIGGFLTHCGWNSTLEGVS----AGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 110 ~~~~~~~I~hgG~~sv~eal~----~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d 183 (232)
.+++ +|+=||-||+..++. .++|++.+-.. .+|.. .+ ++++++.+++++++++
T Consensus 63 ~~d~--vi~lGGDGT~L~aa~~~~~~~~Pilgin~G------------~lGFl---~~----~~~~~~~~~l~~i~~g 119 (292)
T PRK03378 63 QADL--AIVVGGDGNMLGAARVLARYDIKVIGINRG------------NLGFL---TD----LDPDNALQQLSDVLEG 119 (292)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCeEEEEECC------------CCCcc---cc----cCHHHHHHHHHHHHcC
Confidence 4555 999999999999974 36787777331 12322 22 6688888999988874
No 192
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=45.66 E-value=2e+02 Score=26.28 Aligned_cols=96 Identities=18% Similarity=0.157 Sum_probs=56.8
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCe-EEecccchhhhhc
Q 046553 31 EPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGF-IIRGWAPQVLLLS 109 (232)
Q Consensus 31 ~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv-~v~~~~pq~~lL~ 109 (232)
.+||.|-+|+ ...+...+..+.+.|++.+|.++..+.....- .-+++-.....+ -+.+...+.. -
T Consensus 183 ~~kp~I~iTm---fGvTTp~V~~~~~~Le~~G~Ev~VFHAtG~GG---------~aME~Li~~G~~~~VlDlTttEl-~- 248 (403)
T PF06792_consen 183 EDKPLIGITM---FGVTTPCVDAIRERLEEEGYEVLVFHATGTGG---------RAMERLIREGQFDGVLDLTTTEL-A- 248 (403)
T ss_pred CCCcEEEEEC---CCCcHHHHHHHHHHHHhcCCeEEEEcCCCCch---------HHHHHHHHcCCcEEEEECcHHHH-H-
Confidence 5688888764 33445778888899988899988776543321 111111111111 1223322221 1
Q ss_pred ccCcceEEecCCchhHHHHHHhCCCeeecccc
Q 046553 110 HRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLF 141 (232)
Q Consensus 110 ~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~ 141 (232)
..-+ .-+..+|-.-+-.|...|+|+|+.|=.
T Consensus 249 d~l~-GGv~sagp~Rl~AA~~~GIP~Vvs~Ga 279 (403)
T PF06792_consen 249 DELF-GGVLSAGPDRLEAAARAGIPQVVSPGA 279 (403)
T ss_pred HHHh-CCCCCCCchHHHHHHHcCCCEEEecCc
Confidence 1111 146778888899999999999999953
No 193
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=45.00 E-value=2.9e+02 Score=26.46 Aligned_cols=27 Identities=19% Similarity=0.375 Sum_probs=16.3
Q ss_pred eEEecCCchhHHHHHH---hCCCeeecccc
Q 046553 115 GFLTHCGWNSTLEGVS---AGVPLVTRPLF 141 (232)
Q Consensus 115 ~~I~hgG~~sv~eal~---~GvP~i~~P~~ 141 (232)
+||.-.|.-.-.-... .-+|+|.+|..
T Consensus 468 v~i~~ag~~~~l~~~~a~~t~~pvi~vp~~ 497 (577)
T PLN02948 468 VIIAGAGGAAHLPGMVASMTPLPVIGVPVK 497 (577)
T ss_pred EEEEEcCccccchHHHhhccCCCEEEcCCC
Confidence 3777666443333333 34899999984
No 194
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=44.69 E-value=43 Score=28.72 Aligned_cols=57 Identities=14% Similarity=0.071 Sum_probs=37.6
Q ss_pred hhhcccCcceEEecCCchhHHHHHH----hCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHH
Q 046553 106 LLLSHRAIGGFLTHCGWNSTLEGVS----AGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLM 181 (232)
Q Consensus 106 ~lL~~~~~~~~I~hgG~~sv~eal~----~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl 181 (232)
.+...+++ +|+=||-||+..++. .++|++.+-.. .+|.... ++++++.+.+.+++
T Consensus 38 ~~~~~~d~--vi~iGGDGT~L~aa~~~~~~~~PilgIn~G------------~lGFL~~-------~~~~~~~~~l~~~~ 96 (272)
T PRK02231 38 EIGQRAQL--AIVIGGDGNMLGRARVLAKYDIPLIGINRG------------NLGFLTD-------IDPKNAYEQLEACL 96 (272)
T ss_pred HhCcCCCE--EEEECCcHHHHHHHHHhccCCCcEEEEeCC------------CCccccc-------CCHHHHHHHHHHHH
Confidence 33334566 999999999998754 36788877431 2333221 56777778888777
Q ss_pred cC
Q 046553 182 DR 183 (232)
Q Consensus 182 ~d 183 (232)
.+
T Consensus 97 ~~ 98 (272)
T PRK02231 97 ER 98 (272)
T ss_pred hc
Confidence 63
No 195
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=44.44 E-value=2.7e+02 Score=26.02 Aligned_cols=141 Identities=13% Similarity=0.110 Sum_probs=79.1
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEeccc-------ch
Q 046553 32 PWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWA-------PQ 104 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~-------pq 104 (232)
.+.+++...||+... ....+++.|.+.+..+-..+.... .+|+-|..+ +......++..-|. ++
T Consensus 70 ~k~IllgVtGsIAay---ka~~lvr~L~k~G~~V~VvmT~sA-----~~fv~p~~~-~~ls~~~V~~d~~~~~~~~~~~H 140 (475)
T PRK13982 70 SKRVTLIIGGGIAAY---KALDLIRRLKERGAHVRCVLTKAA-----QQFVTPLTA-SALSGQRVYTDLFDPESEFDAGH 140 (475)
T ss_pred CCEEEEEEccHHHHH---HHHHHHHHHHhCcCEEEEEECcCH-----HHHhhHHHH-HHhcCCceEecCCCcccccCccc
Confidence 355777777777753 345567777777877665554332 223223322 22223333332232 23
Q ss_pred hhhhcccCcceEEecCCchhHHHH-------------HHhCCCeeecccccch-------hHHHHHHHh-hhhhccccc-
Q 046553 105 VLLLSHRAIGGFLTHCGWNSTLEG-------------VSAGVPLVTRPLFAEQ-------FYNDKLAVQ-AAVTWGLED- 162 (232)
Q Consensus 105 ~~lL~~~~~~~~I~hgG~~sv~ea-------------l~~GvP~i~~P~~~DQ-------~~nA~~v~~-G~g~~~~~~- 162 (232)
..+...+++ .+|.-|-+||+.-. +..+.|++++|-.... ..|-..+.+ |+-+.-...
T Consensus 141 i~la~~aD~-~vVAPATANTIAKiA~GiADnLlt~v~La~~~PvliaPaMN~~M~~npat~~Nl~~L~~~G~~vi~P~~g 219 (475)
T PRK13982 141 IRLARDCDL-IVVAPATADLMAKMANGLADDLASAILLAANRPILLAPAMNPLMWNNPATRRNVAQLKRDGVHMIGPNAG 219 (475)
T ss_pred hhhhhhcCE-EEEeeCCHHHHHHHHccccCcHHHHHHHhcCCCEEEEEcCCHHHhcCHHHHHHHHHHHHCCCEEECCCCC
Confidence 444444554 57777777765533 6678999999965433 356777777 765532211
Q ss_pred -------CC-CcccCHHHHHHHHHHHHc
Q 046553 163 -------KS-GLVIKREKVKEAIEKLMD 182 (232)
Q Consensus 163 -------~~-~~~~~~~~l~~~i~~vl~ 182 (232)
.. +.-..+++|...+.+++.
T Consensus 220 ~lA~~g~~G~Grm~e~~~I~~~v~~~~~ 247 (475)
T PRK13982 220 EMAERGEAGVGRMAEPLEIAAAAEALLR 247 (475)
T ss_pred ccccCCCcCCCCCCCHHHHHHHHHHHHh
Confidence 00 334677788888887774
No 196
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=43.94 E-value=51 Score=28.83 Aligned_cols=53 Identities=23% Similarity=0.283 Sum_probs=37.3
Q ss_pred ccCcceEEecCCchhHHHHHHh----CCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcC
Q 046553 110 HRAIGGFLTHCGWNSTLEGVSA----GVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 110 ~~~~~~~I~hgG~~sv~eal~~----GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d 183 (232)
.+++ +|+=||-||+..++.. ++|++.+... .+|... + +.++++.+++.+++.+
T Consensus 72 ~~D~--vi~lGGDGT~L~aar~~~~~~~PilGIN~G------------~lGFL~---~----~~~~~~~~~l~~i~~g 128 (306)
T PRK03372 72 GCEL--VLVLGGDGTILRAAELARAADVPVLGVNLG------------HVGFLA---E----AEAEDLDEAVERVVDR 128 (306)
T ss_pred CCCE--EEEEcCCHHHHHHHHHhccCCCcEEEEecC------------CCceec---c----CCHHHHHHHHHHHHcC
Confidence 4555 9999999999998653 7898888541 122221 1 5677888888888874
No 197
>PF03641 Lysine_decarbox: Possible lysine decarboxylase; InterPro: IPR005269 This entry represents a cytokinin-activating enzyme working in the direct activation pathway. It is a phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms [, ]. The proteins in this entry belong to the LOG family of proteins.; PDB: 1YDH_B 2Q4D_A 1RCU_C 1WEH_B 3SBX_F 3BQ9_B 2PMB_D 3GH1_D 1WEK_C 3QUA_A ....
Probab=43.46 E-value=33 Score=25.84 Aligned_cols=34 Identities=15% Similarity=0.041 Sum_probs=21.2
Q ss_pred hhhcccCcceEEecCCchhHHHHHHh----------CCCeeecc
Q 046553 106 LLLSHRAIGGFLTHCGWNSTLEGVSA----------GVPLVTRP 139 (232)
Q Consensus 106 ~lL~~~~~~~~I~hgG~~sv~eal~~----------GvP~i~~P 139 (232)
.+|-..+...++.-||.||+.|.... .+|++++=
T Consensus 48 ~~m~~~sda~I~lPGG~GTl~El~~~~~~~~l~~~~~~Piil~~ 91 (133)
T PF03641_consen 48 EIMIESSDAFIALPGGIGTLDELFEALTLMQLGRHNKVPIILLN 91 (133)
T ss_dssp HHHHHHESEEEEES-SHHHHHHHHHHHHHHHTTSSTS-EEEEEE
T ss_pred HHHHHhCCEEEEEecCCchHHHHHHHHHHHhhccccCCCEEEeC
Confidence 34443343468889999999988543 34888864
No 198
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=43.42 E-value=54 Score=30.78 Aligned_cols=53 Identities=13% Similarity=0.157 Sum_probs=37.1
Q ss_pred ccCcceEEecCCchhHHHHHHh----CCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcC
Q 046553 110 HRAIGGFLTHCGWNSTLEGVSA----GVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 110 ~~~~~~~I~hgG~~sv~eal~~----GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d 183 (232)
.+++ +|+=||-||+..++.. ++|++.+-+. -+|.. .+ ++++++..+|.+++.+
T Consensus 262 ~~Dl--VIsiGGDGTlL~Aar~~~~~~iPILGIN~G------------~LGFL---t~----i~~~e~~~~Le~il~G 318 (508)
T PLN02935 262 KVDL--VITLGGDGTVLWAASMFKGPVPPVVPFSMG------------SLGFM---TP----FHSEQYRDCLDAILKG 318 (508)
T ss_pred CCCE--EEEECCcHHHHHHHHHhccCCCcEEEEeCC------------Cccee---cc----cCHHHHHHHHHHHHcC
Confidence 4555 9999999999998763 4677766320 23432 22 6788899999998874
No 199
>PF05014 Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransferase; InterPro: IPR007710 Nucleoside 2-deoxyribosyltransferase (2.4.2.6 from EC) catalyses the cleavage of the glycosidic bonds of 2-deoxyribonucleosides. Nucleoside 2-deoxyribosyltransferases can be divided into two groups based on their substrate specificity: class I enzymes are specific for the transfer of deoxyribose between two purines, while class II enzymes will transfer the deoxyribose between either purines or pyrimidines. The structure of the class I [] and class II [] enzymes are very similar. In class I enzymes, the purine base shields the active site from solvent, which the smaller pyrimidine base cannot do, while in class II enzymes the active site is shielded by a loop (residues 48-62). Both classes of enzymes are found in various Lactobacillus species and participate in nucleoside recycling in these microorganisms. This entry represents both classes of enzymes.; GO: 0050144 nucleoside deoxyribosyltransferase activity, 0070694 deoxyribonucleoside 5'-monophosphate N-glycosidase activity, 0009159 deoxyribonucleoside monophosphate catabolic process; PDB: 1S2L_A 1S2D_C 1S2I_A 1S3F_B 1S2G_C 2A0K_A 2F67_A 2F64_B 2F62_A 2F2T_A ....
Probab=43.29 E-value=40 Score=24.36 Aligned_cols=36 Identities=11% Similarity=-0.057 Sum_probs=25.5
Q ss_pred hhhhcccCcceEEecC---CchhHHHH---HHhCCCeeeccc
Q 046553 105 VLLLSHRAIGGFLTHC---GWNSTLEG---VSAGVPLVTRPL 140 (232)
Q Consensus 105 ~~lL~~~~~~~~I~hg---G~~sv~ea---l~~GvP~i~~P~ 140 (232)
...+..|++-+++-.+ +.||..|. .+.|+|++++-.
T Consensus 56 ~~~i~~~D~via~l~~~~~d~Gt~~ElG~A~algkpv~~~~~ 97 (113)
T PF05014_consen 56 LEGIRECDIVIANLDGFRPDSGTAFELGYAYALGKPVILLTE 97 (113)
T ss_dssp HHHHHHSSEEEEEECSSS--HHHHHHHHHHHHTTSEEEEEEC
T ss_pred HHHHHHCCEEEEECCCCCCCCcHHHHHHHHHHCCCEEEEEEc
Confidence 3456677775555555 89999996 667999999754
No 200
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=42.31 E-value=60 Score=27.82 Aligned_cols=53 Identities=21% Similarity=0.231 Sum_probs=37.1
Q ss_pred ccCcceEEecCCchhHHHHHH-hCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcC
Q 046553 110 HRAIGGFLTHCGWNSTLEGVS-AGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 110 ~~~~~~~I~hgG~~sv~eal~-~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d 183 (232)
.+++ +|+=||-||+..++. ...|++.+-.. .+|.. .+ ++.+++..++++++++
T Consensus 52 ~~D~--vi~lGGDGT~L~a~~~~~~PilGIN~G------------~lGFL---~~----~~~~~~~~~l~~i~~g 105 (271)
T PRK01185 52 NADV--IITIGGDGTILRTLQRAKGPILGINMG------------GLGFL---TE----IEIDEVGSAIKKLIRG 105 (271)
T ss_pred CCCE--EEEEcCcHHHHHHHHHcCCCEEEEECC------------CCccC---cc----cCHHHHHHHHHHHHcC
Confidence 4555 999999999998877 35677766321 22332 22 6788888899988874
No 201
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=42.27 E-value=1.7e+02 Score=25.75 Aligned_cols=37 Identities=19% Similarity=0.184 Sum_probs=28.5
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCC
Q 046553 34 SVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGG 72 (232)
Q Consensus 34 ~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~ 72 (232)
.++++++|+.+. -.-+..+..+|.+.|+++.+.+...
T Consensus 2 rIl~~~~p~~GH--v~P~l~la~~L~~rGh~V~~~t~~~ 38 (401)
T cd03784 2 RVLITTIGSRGD--VQPLVALAWALRAAGHEVRVATPPE 38 (401)
T ss_pred eEEEEeCCCcch--HHHHHHHHHHHHHCCCeEEEeeCHh
Confidence 378889998774 4445678899989999998887653
No 202
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=41.98 E-value=38 Score=28.92 Aligned_cols=39 Identities=5% Similarity=0.051 Sum_probs=24.9
Q ss_pred cEEEEEeCCCCCCC-HHHHHHHHHHHhh--CCCcEEEEEcCC
Q 046553 34 SVIYACLGSICGLA-TWQLLELGLGLEA--SSQPFIWVIRGG 72 (232)
Q Consensus 34 ~vV~vs~GS~~~~~-~~~~~~l~~~l~~--~~~~~i~~~~~~ 72 (232)
-++++||||..... ...+..+.+.+++ +++.|.|+..+.
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS~ 43 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTSR 43 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-H
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchHH
Confidence 48999999999865 4467777777755 478999987643
No 203
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=41.36 E-value=65 Score=27.28 Aligned_cols=53 Identities=17% Similarity=0.174 Sum_probs=36.2
Q ss_pred ccCcceEEecCCchhHHHHHH-hCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcC
Q 046553 110 HRAIGGFLTHCGWNSTLEGVS-AGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 110 ~~~~~~~I~hgG~~sv~eal~-~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d 183 (232)
.+++ +|+=||-||+..++. +++|++.+-.. .+|... + ++.+++.+++.++++.
T Consensus 41 ~~d~--vi~iGGDGT~L~a~~~~~~Pilgin~G------------~lGfl~---~----~~~~~~~~~l~~~~~g 94 (256)
T PRK14075 41 TADL--IIVVGGDGTVLKAAKKVGTPLVGFKAG------------RLGFLS---S----YTLEEIDRFLEDLKNW 94 (256)
T ss_pred CCCE--EEEECCcHHHHHHHHHcCCCEEEEeCC------------CCcccc---c----cCHHHHHHHHHHHHcC
Confidence 3455 999999999998866 57888777421 123222 1 5677788888888763
No 204
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=40.70 E-value=1.5e+02 Score=22.28 Aligned_cols=26 Identities=15% Similarity=0.114 Sum_probs=20.6
Q ss_pred eEEecCCc------hhHHHHHHhCCCeeeccc
Q 046553 115 GFLTHCGW------NSTLEGVSAGVPLVTRPL 140 (232)
Q Consensus 115 ~~I~hgG~------~sv~eal~~GvP~i~~P~ 140 (232)
++++|.|. +.+.+|...++|+|++.-
T Consensus 62 v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 62 VVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred EEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 48888664 478889999999999863
No 205
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=40.59 E-value=60 Score=27.71 Aligned_cols=53 Identities=11% Similarity=0.107 Sum_probs=35.5
Q ss_pred cCcceEEecCCchhHHHHHHh-----CCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcC
Q 046553 111 RAIGGFLTHCGWNSTLEGVSA-----GVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 111 ~~~~~~I~hgG~~sv~eal~~-----GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d 183 (232)
+++ +|+=||-||+..++.. .+|++.+... |-..-..+ ++.+++.+++.+++++
T Consensus 40 ~D~--vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~--------------G~lGFL~~----~~~~~~~~~l~~i~~g 97 (264)
T PRK03501 40 ANI--IVSIGGDGTFLQAVRKTGFREDCLYAGISTK--------------DQLGFYCD----FHIDDLDKMIQAITKE 97 (264)
T ss_pred ccE--EEEECCcHHHHHHHHHhcccCCCeEEeEecC--------------CCCeEccc----CCHHHHHHHHHHHHcC
Confidence 455 9999999999999864 5676666430 22111222 5678888888888764
No 206
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=40.50 E-value=1.6e+02 Score=22.87 Aligned_cols=27 Identities=26% Similarity=0.394 Sum_probs=20.6
Q ss_pred cceEEecCCc------hhHHHHHHhCCCeeecc
Q 046553 113 IGGFLTHCGW------NSTLEGVSAGVPLVTRP 139 (232)
Q Consensus 113 ~~~~I~hgG~------~sv~eal~~GvP~i~~P 139 (232)
.++++++.|. +.+.+|...++|+|++.
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 92 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIV 92 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEe
Confidence 3346777664 47788999999999996
No 207
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=40.46 E-value=1.3e+02 Score=28.43 Aligned_cols=80 Identities=14% Similarity=0.002 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHh-cCCCeEEecccchh---------hhhcccCcceEEe
Q 046553 49 WQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERA-KGRGFIIRGWAPQV---------LLLSHRAIGGFLT 118 (232)
Q Consensus 49 ~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq~---------~lL~~~~~~~~I~ 118 (232)
.....+++.|.+.|.+.+..+.+... +| +...+ ..+++.+.. ..+. .-...-..+++++
T Consensus 14 ~~~~~l~~~L~~~GV~~vFgvpG~~~--------~~--l~dal~~~~~i~~i~-~~hE~~A~~~Adgyar~tg~~gv~~~ 82 (564)
T PRK08155 14 TGAELIVRLLERQGIRIVTGIPGGAI--------LP--LYDALSQSTQIRHIL-ARHEQGAGFIAQGMARTTGKPAVCMA 82 (564)
T ss_pred cHHHHHHHHHHHcCCCEEEeCCCccc--------HH--HHHHHhccCCceEEE-eccHHHHHHHHHHHHHHcCCCeEEEE
Confidence 34566788888888888877766542 11 22222 122343321 1111 0011113334788
Q ss_pred cCCch------hHHHHHHhCCCeeecc
Q 046553 119 HCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 119 hgG~~------sv~eal~~GvP~i~~P 139 (232)
|.|-| .+++|...++|+|++.
T Consensus 83 t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 83 CSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred CCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 87754 7899999999999984
No 208
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=40.30 E-value=67 Score=25.30 Aligned_cols=105 Identities=18% Similarity=0.144 Sum_probs=57.3
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchhhhhccc
Q 046553 32 PWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQVLLLSHR 111 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~ 111 (232)
.+.+-.+.+|.++ ..+++.+...+++++..-+.... ..... ...+ .+.+...+++.+
T Consensus 36 g~tvgIiG~G~IG-------~~vA~~l~~fG~~V~~~d~~~~~---------~~~~~----~~~~---~~~~l~ell~~a 92 (178)
T PF02826_consen 36 GKTVGIIGYGRIG-------RAVARRLKAFGMRVIGYDRSPKP---------EEGAD----EFGV---EYVSLDELLAQA 92 (178)
T ss_dssp TSEEEEESTSHHH-------HHHHHHHHHTT-EEEEEESSCHH---------HHHHH----HTTE---EESSHHHHHHH-
T ss_pred CCEEEEEEEcCCc-------CeEeeeeecCCceeEEecccCCh---------hhhcc----cccc---eeeehhhhcchh
Confidence 4667788888887 45666666779987766544321 01011 1122 456777899999
Q ss_pred CcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhh-hcccccCCCcccCHHHHHHHHH
Q 046553 112 AIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAV-TWGLEDKSGLVIKREKVKEAIE 178 (232)
Q Consensus 112 ~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g-~~~~~~~~~~~~~~~~l~~~i~ 178 (232)
++ ++.|+-.+. -..+..|+..+.. .-| +.++..+ +..++.+.|.++++
T Consensus 93 Di--v~~~~plt~----------------~T~~li~~~~l~~mk~ga~lvN~aR-G~~vde~aL~~aL~ 142 (178)
T PF02826_consen 93 DI--VSLHLPLTP----------------ETRGLINAEFLAKMKPGAVLVNVAR-GELVDEDALLDALE 142 (178)
T ss_dssp SE--EEE-SSSST----------------TTTTSBSHHHHHTSTTTEEEEESSS-GGGB-HHHHHHHHH
T ss_pred hh--hhhhhcccc----------------ccceeeeeeeeeccccceEEEeccc-hhhhhhhHHHHHHh
Confidence 98 888773321 1245667777777 322 3333332 33466666666554
No 209
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=40.29 E-value=62 Score=28.11 Aligned_cols=74 Identities=16% Similarity=0.099 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchhhhhcccCcceEEecCCchhHH
Q 046553 47 ATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTL 126 (232)
Q Consensus 47 ~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~hgG~~sv~ 126 (232)
..+....+.+++.......||.+.+.... .++.++++...+-.+|.. ||-.....+++
T Consensus 51 ~~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~--------------------~rlL~~lD~~~i~~~PK~--fiGySDiTaL~ 108 (308)
T cd07062 51 PEERAEELMAAFADPSIKAIIPTIGGDDS--------------------NELLPYLDYELIKKNPKI--FIGYSDITALH 108 (308)
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCcccCH--------------------hhhhhhcCHHHHhhCCCE--EEeccHHHHHH
Confidence 35667788999988888999988776532 123345555555566665 88888888888
Q ss_pred HHHH--hCCCeeeccccc
Q 046553 127 EGVS--AGVPLVTRPLFA 142 (232)
Q Consensus 127 eal~--~GvP~i~~P~~~ 142 (232)
-+++ .|.+.+.-|+..
T Consensus 109 ~al~~~~g~~t~hGp~~~ 126 (308)
T cd07062 109 LAIYKKTGLVTYYGPNLL 126 (308)
T ss_pred HHHHHhcCCeEEECcccc
Confidence 8774 367777777654
No 210
>PRK13840 sucrose phosphorylase; Provisional
Probab=40.10 E-value=2.7e+02 Score=26.18 Aligned_cols=133 Identities=17% Similarity=0.070 Sum_probs=74.1
Q ss_pred ChhhHHHHhcCCCCCcEEEEEe---------CC-----CCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhh
Q 046553 19 DDEQCLKWLDSWEPWSVIYACL---------GS-----ICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQE 84 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~---------GS-----~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp 84 (232)
+...|.+||...|.+..-|+-. |. -+.++.+....+.+.+.+.+..+.+...+.... ....|++.
T Consensus 268 ~~~~L~~~l~~~p~~~~n~L~~HDgIgl~d~~~~~~~~~gll~~~e~~~l~~~~~~~~~~~~~~~~~~~as-~~~~Y~in 346 (495)
T PRK13840 268 DVEALAHWLEIRPRNAVTVLDTHDGIGIIDVGADDRGLAGLLPDEQIDNLVETIHANSHGESRQATGAAAS-NLDLYQVN 346 (495)
T ss_pred CchHHHHHHHhCCCccEEeeecCCCCCcccccccccccccCCCHHHHHHHHHHHHHhccCceeecCCcccc-cccchhhh
Confidence 3456778888876655433331 11 133567778888888888888888876654311 11111122
Q ss_pred hhHHHHhcCCCeEEecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccC
Q 046553 85 EGLEERAKGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDK 163 (232)
Q Consensus 85 ~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~ 163 (232)
-++...+.... +.-+++|+- ....-|+|+|-..-..-+.-.-..+++ |.+..+++..
T Consensus 347 ~~~~~Al~~~d--------~r~lla~ai--------------~~~~~GiP~iY~~~ll~~~ND~~~~~~t~~~R~inR~~ 404 (495)
T PRK13840 347 CTYYDALGRND--------QDYLAARAI--------------QFFAPGIPQVYYVGLLAGPNDMELLARTNVGRDINRHY 404 (495)
T ss_pred ccHHHHhcCCc--------HHHHHHHHH--------------HHcCCCcceeeechhhccCccHHHHHhcCCCcccCCCC
Confidence 22222222111 122232322 234558898887643333333455667 8899888876
Q ss_pred CCcccCHHHHHHHHH
Q 046553 164 SGLVIKREKVKEAIE 178 (232)
Q Consensus 164 ~~~~~~~~~l~~~i~ 178 (232)
++.+++.+.+.
T Consensus 405 ----~~~~~~~~~l~ 415 (495)
T PRK13840 405 ----YSTAEIDEALE 415 (495)
T ss_pred ----CCHHHHHHHHH
Confidence 88888887753
No 211
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=38.16 E-value=85 Score=27.21 Aligned_cols=53 Identities=13% Similarity=0.122 Sum_probs=37.4
Q ss_pred ccCcceEEecCCchhHHHHHH----hCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcC
Q 046553 110 HRAIGGFLTHCGWNSTLEGVS----AGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 110 ~~~~~~~I~hgG~~sv~eal~----~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d 183 (232)
.+++ +|+=||-||+.+++. .++|++.+... .+|.. .+ ++++++.+++++++++
T Consensus 62 ~~d~--vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G------------~lGFl---~~----~~~~~~~~~l~~~~~g 118 (295)
T PRK01231 62 VCDL--VIVVGGDGSLLGAARALARHNVPVLGINRG------------RLGFL---TD----IRPDELEFKLAEVLDG 118 (295)
T ss_pred CCCE--EEEEeCcHHHHHHHHHhcCCCCCEEEEeCC------------ccccc---cc----CCHHHHHHHHHHHHcC
Confidence 3555 999999999999865 36788887541 12221 11 6788899999998874
No 212
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=37.89 E-value=3.1e+02 Score=24.82 Aligned_cols=140 Identities=18% Similarity=0.245 Sum_probs=74.1
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccch------h
Q 046553 32 PWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQ------V 105 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq------~ 105 (232)
.+.+++...||.... ....+++.|.+.++.+-+.+.... .+|+-|+.+.. .....++..-|.+. .
T Consensus 3 ~k~IllgiTGSiaa~---~~~~ll~~L~~~g~~V~vv~T~~A-----~~fv~~~~l~~-~~~~~v~~~~~~~~~~~~~hi 73 (390)
T TIGR00521 3 NKKILLGVTGGIAAY---KTVELVRELVRQGAEVKVIMTEAA-----KKFITPLTLEA-LSGHKVVTELWGPIEHNALHI 73 (390)
T ss_pred CCEEEEEEeCHHHHH---HHHHHHHHHHhCCCEEEEEECHhH-----HHHHHHHHHHH-hhCCceeehhccccccccchh
Confidence 355777777777752 245566777667777665554322 12312222222 11222332223221 1
Q ss_pred hhhcccCcceEEecCCchhHHHH-------------HHhCCCeeecccccchh-------HHHHHHHh-hhhhcccc---
Q 046553 106 LLLSHRAIGGFLTHCGWNSTLEG-------------VSAGVPLVTRPLFAEQF-------YNDKLAVQ-AAVTWGLE--- 161 (232)
Q Consensus 106 ~lL~~~~~~~~I~hgG~~sv~ea-------------l~~GvP~i~~P~~~DQ~-------~nA~~v~~-G~g~~~~~--- 161 (232)
.+...+++ .+|.-|-+||+.-. +.+-+|+++.|-..+.+ .|..++.+ |+-+.-..
T Consensus 74 ~l~~~aD~-~vVaPaTanTlaKiA~GiaDnLlt~~~~~~~~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~ 152 (390)
T TIGR00521 74 DLAKWADL-ILIAPATANTISKIAHGIADDLVSTTALAASAPIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGL 152 (390)
T ss_pred hcccccCE-EEEecCCHHHHHHHHcccCCcHHHHHHHHhCCCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCcc
Confidence 23344444 57777777766533 33449999999754443 35566666 65543222
Q ss_pred ------cCCCcccCHHHHHHHHHHHHc
Q 046553 162 ------DKSGLVIKREKVKEAIEKLMD 182 (232)
Q Consensus 162 ------~~~~~~~~~~~l~~~i~~vl~ 182 (232)
.+ +.-.+.+++...+.+.+.
T Consensus 153 ~ac~~~g~-g~~~~~~~i~~~v~~~~~ 178 (390)
T TIGR00521 153 LACGDEGK-GRLAEPETIVKAAEREFS 178 (390)
T ss_pred cccccccC-CCCCCHHHHHHHHHHHHh
Confidence 00 223577788777777764
No 213
>PRK02399 hypothetical protein; Provisional
Probab=37.73 E-value=3e+02 Score=25.15 Aligned_cols=94 Identities=18% Similarity=0.163 Sum_probs=54.2
Q ss_pred CCCCcEEEEEe-CCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeE--Eecccchhh
Q 046553 30 WEPWSVIYACL-GSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFI--IRGWAPQVL 106 (232)
Q Consensus 30 ~~~~~vV~vs~-GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~--v~~~~pq~~ 106 (232)
..+||.|-+|+ |.. ..-+..+.+.|.+.+|.++..+.....-.. -+.+- ..+.+ +.+...+..
T Consensus 183 ~~~kp~Ig~TmfGvT----tp~v~~~~~~Le~~GyEvlVFHATG~GGra------ME~Li----~~G~~~gVlDlTttEv 248 (406)
T PRK02399 183 SDDKPLIGLTMFGVT----TPCVQAAREELEARGYEVLVFHATGTGGRA------MEKLI----DSGLIAGVLDLTTTEV 248 (406)
T ss_pred CCCCceEEEecCCCc----HHHHHHHHHHHHhCCCeEEEEcCCCCchHH------HHHHH----HcCCceEEEEcchHHH
Confidence 34688887765 443 466778888898889988877643322101 11111 11111 223333321
Q ss_pred hhcccCcceEEecCCchhHHHHHHhCCCeeeccc
Q 046553 107 LLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPL 140 (232)
Q Consensus 107 lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~ 140 (232)
..--+ .-|..+|-.-+-.+...|+|+|+.|=
T Consensus 249 --~d~l~-GGv~sagp~Rl~Aa~~~gIP~Vvs~G 279 (406)
T PRK02399 249 --CDELF-GGVLAAGPDRLEAAARTGIPQVVSPG 279 (406)
T ss_pred --HHHHh-CcCccCCccHHHHHHHcCCCEEecCC
Confidence 11111 13566788888999999999998773
No 214
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=36.79 E-value=1.6e+02 Score=25.16 Aligned_cols=35 Identities=11% Similarity=0.137 Sum_probs=24.5
Q ss_pred hhhcccCcceEEecCCch-----hHHHHHHhCCCeeeccc
Q 046553 106 LLLSHRAIGGFLTHCGWN-----STLEGVSAGVPLVTRPL 140 (232)
Q Consensus 106 ~lL~~~~~~~~I~hgG~~-----sv~eal~~GvP~i~~P~ 140 (232)
..+...++-++|+|.|.. .+..+-..|+|+|.+--
T Consensus 173 ~~~~~~Dv~i~iS~sG~t~e~i~~a~~ak~~ga~vIaiT~ 212 (281)
T COG1737 173 ALLTPGDVVIAISFSGYTREIVEAAELAKERGAKVIAITD 212 (281)
T ss_pred HhCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEcC
Confidence 345555666788998854 45556778999998753
No 215
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=36.36 E-value=94 Score=24.17 Aligned_cols=27 Identities=11% Similarity=0.171 Sum_probs=20.3
Q ss_pred ceEEecCCc------hhHHHHHHhCCCeeeccc
Q 046553 114 GGFLTHCGW------NSTLEGVSAGVPLVTRPL 140 (232)
Q Consensus 114 ~~~I~hgG~------~sv~eal~~GvP~i~~P~ 140 (232)
.++++|.|. +++.+|...++|+|++.-
T Consensus 66 ~v~~~~~GpG~~n~~~~l~~A~~~~~Pvl~i~g 98 (172)
T PF02776_consen 66 GVVIVTSGPGATNALTGLANAYADRIPVLVITG 98 (172)
T ss_dssp EEEEEETTHHHHTTHHHHHHHHHTT-EEEEEEE
T ss_pred eEEEeecccchHHHHHHHhhcccceeeEEEEec
Confidence 348888874 478889999999999864
No 216
>PF01924 HypD: Hydrogenase formation hypA family; InterPro: IPR002780 HypD is involved in the hyp operon which is needed for the activity of the three hydrogenase isoenzymes in Escherichia coli. HypD is one of the genes needed for formation of these enzymes []. This protein has been found in Gram-negative and Gram-positive bacteria and Archaea. HypD contains many possible metal binding residues, which may bind to nickel. Transposon insertions into HypD resulted in Rhizobium leguminosarum mutants that lacked any hydrogenase activity in symbiosis with peas [].; GO: 0046872 metal ion binding; PDB: 2Z1D_A.
Probab=36.30 E-value=63 Score=28.84 Aligned_cols=48 Identities=15% Similarity=0.139 Sum_probs=27.0
Q ss_pred cCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHH
Q 046553 168 IKREKVKEAIEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVI 223 (232)
Q Consensus 168 ~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~ 223 (232)
+.+.+|..+|..++. .+.++-.++....++++.+.|.. .+.++++++.
T Consensus 215 FEp~diL~ai~~lv~------qi~~g~~~v~N~Y~r~V~~eGN~--~A~~~i~evF 262 (355)
T PF01924_consen 215 FEPLDILQAIYMLVK------QINEGEAEVENQYPRVVKPEGNP--KAQELINEVF 262 (355)
T ss_dssp SSHHHHHHHHHHHHH------HHHTT---EEES-TTT--TT--H--HHHHHHHHHE
T ss_pred CCHHHHHHHHHHHHH------HHHCCCCeEEEecceeeCCccCH--HHHHHHHHHh
Confidence 667888888887776 55666666666677677777765 5556666654
No 217
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=35.89 E-value=75 Score=30.26 Aligned_cols=51 Identities=12% Similarity=0.218 Sum_probs=36.5
Q ss_pred ceEEecCCchhHHHHHHh----CCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcC
Q 046553 114 GGFLTHCGWNSTLEGVSA----GVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 114 ~~~I~hgG~~sv~eal~~----GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d 183 (232)
.++|+-||-||+..++.. ++|++.+-+. -+|. ..+ ++++++.+.++++++.
T Consensus 350 dlvi~lGGDGT~L~aa~~~~~~~~PilGin~G------------~lGF---L~~----~~~~~~~~~l~~~~~g 404 (569)
T PRK14076 350 SHIISIGGDGTVLRASKLVNGEEIPIICINMG------------TVGF---LTE----FSKEEIFKAIDSIISG 404 (569)
T ss_pred CEEEEECCcHHHHHHHHHhcCCCCCEEEEcCC------------CCCc---Ccc----cCHHHHHHHHHHHHcC
Confidence 449999999999998663 6788887431 1222 222 6778888888888874
No 218
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=35.83 E-value=2.6e+02 Score=23.31 Aligned_cols=103 Identities=13% Similarity=0.050 Sum_probs=58.8
Q ss_pred HHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEeccc
Q 046553 23 CLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWA 102 (232)
Q Consensus 23 l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~ 102 (232)
+..|+... .+.+.||=+-|........+.+..++|.+.++.+.-........ +.+........+..++=-
T Consensus 24 i~n~l~g~-~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~~~~~---------~~Ie~~l~~~d~IyVgGG 93 (224)
T COG3340 24 IANFLQGK-RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLSKPPL---------AAIENKLMKADIIYVGGG 93 (224)
T ss_pred HHHHhcCC-CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeeccCCCH---------HHHHHhhhhccEEEECCc
Confidence 33444443 45799998888777667788899999999999887766544321 223222222222222211
Q ss_pred chhhhhcccCcceEEecCCchhHHHHHHhCCCeeeccc
Q 046553 103 PQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPL 140 (232)
Q Consensus 103 pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~ 140 (232)
.-..+|.. .-.||=.--+.|.+.+|+|.|.+--
T Consensus 94 NTF~LL~~-----lke~gld~iIr~~vk~G~~YiG~SA 126 (224)
T COG3340 94 NTFNLLQE-----LKETGLDDIIRERVKAGTPYIGWSA 126 (224)
T ss_pred hHHHHHHH-----HHHhCcHHHHHHHHHcCCceEEecc
Confidence 21222211 1112223346788999999888764
No 219
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=35.66 E-value=74 Score=23.74 Aligned_cols=37 Identities=11% Similarity=0.206 Sum_probs=27.1
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHHHhh--CCCcEEEEEc
Q 046553 34 SVIYACLGSICGLATWQLLELGLGLEA--SSQPFIWVIR 70 (232)
Q Consensus 34 ~vV~vs~GS~~~~~~~~~~~l~~~l~~--~~~~~i~~~~ 70 (232)
.+++++|||......+.+..+.+.+.+ .++.+-|...
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 589999999998556677778887754 3456666654
No 220
>COG2607 Predicted ATPase (AAA+ superfamily) [General function prediction only]
Probab=35.56 E-value=2.9e+02 Score=23.75 Aligned_cols=67 Identities=13% Similarity=0.032 Sum_probs=48.9
Q ss_pred hhhhcccccCCCcccCHHHHHHHHHHHHcCC---hhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHhhhccCC
Q 046553 154 AAVTWGLEDKSGLVIKREKVKEAIEKLMDRG---KQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQRTRGQQ 230 (232)
Q Consensus 154 G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d~---~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~~~~~~~ 230 (232)
-.|+++...+ .+.++....|+.....- -.-+.+...|..|+..- ||.|-+.+-+|++.+..+...|.
T Consensus 216 RFGLwL~F~~----~~Q~~YL~~V~~~a~~~~l~~~~e~l~~eAl~WAt~r------g~RSGR~A~QF~~~~~g~~~~~~ 285 (287)
T COG2607 216 RFGLWLSFYP----CDQDEYLKIVDHYAKHFGLDISDEELHAEALQWATTR------GGRSGRVAWQFIRDLAGRLGKQL 285 (287)
T ss_pred hcceeecccC----CCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhc------CCCccHhHHHHHHHHHhhhcccC
Confidence 6778887766 78888888888765421 11236788888887763 77787888999999988876653
No 221
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=34.60 E-value=74 Score=27.30 Aligned_cols=50 Identities=12% Similarity=0.098 Sum_probs=33.8
Q ss_pred eEEecCCchhHHHHHH---hCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcC
Q 046553 115 GFLTHCGWNSTLEGVS---AGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDR 183 (232)
Q Consensus 115 ~~I~hgG~~sv~eal~---~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d 183 (232)
++|+-||-||+.+++. .++|++.+|..- +|.. . + +.++++.+++.+++++
T Consensus 60 ~vi~iGGDGTlL~a~~~~~~~~pi~gIn~G~------------lGFl-~--~----~~~~~~~~~l~~i~~g 112 (277)
T PRK03708 60 FIIAIGGDGTILRIEHKTKKDIPILGINMGT------------LGFL-T--E----VEPEETFFALSRLLEG 112 (277)
T ss_pred EEEEEeCcHHHHHHHHhcCCCCeEEEEeCCC------------CCcc-c--c----CCHHHHHHHHHHHHcC
Confidence 4999999999998874 356888887521 1111 1 1 4567777777777763
No 222
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=34.55 E-value=1.8e+02 Score=25.70 Aligned_cols=27 Identities=7% Similarity=0.140 Sum_probs=22.9
Q ss_pred ccCcceEEecCCchhHHHHHHhCCCeeec
Q 046553 110 HRAIGGFLTHCGWNSTLEGVSAGVPLVTR 138 (232)
Q Consensus 110 ~~~~~~~I~hgG~~sv~eal~~GvP~i~~ 138 (232)
.|++ +|++|+.-...-|...|+|.|.+
T Consensus 83 ~pDv--~is~~s~~a~~va~~lgiP~I~f 109 (335)
T PF04007_consen 83 KPDV--AISFGSPEAARVAFGLGIPSIVF 109 (335)
T ss_pred CCCE--EEecCcHHHHHHHHHhCCCeEEE
Confidence 4666 99999988888889999998876
No 223
>PRK08322 acetolactate synthase; Reviewed
Probab=33.96 E-value=1.2e+02 Score=28.30 Aligned_cols=27 Identities=22% Similarity=0.268 Sum_probs=21.7
Q ss_pred cceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 113 IGGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 113 ~~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
.+++++|.|.| .+++|...++|+|++.
T Consensus 64 ~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 64 AGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 44488887744 8899999999999984
No 224
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=33.80 E-value=1.6e+02 Score=22.54 Aligned_cols=35 Identities=17% Similarity=0.007 Sum_probs=17.9
Q ss_pred EEEEEeCCCCCCC--------HHHHHHHHHHHhhCCCcEEEEE
Q 046553 35 VIYACLGSICGLA--------TWQLLELGLGLEASSQPFIWVI 69 (232)
Q Consensus 35 vV~vs~GS~~~~~--------~~~~~~l~~~l~~~~~~~i~~~ 69 (232)
+|++.+|+.-... .+.+..+++.+...+.+++|..
T Consensus 70 ~vii~~G~ND~~~~~~~~~~~~~~~~~~i~~i~~~~~~vil~~ 112 (185)
T cd01832 70 LVTLLAGGNDILRPGTDPDTYRADLEEAVRRLRAAGARVVVFT 112 (185)
T ss_pred EEEEeccccccccCCCCHHHHHHHHHHHHHHHHhCCCEEEEec
Confidence 6666666654422 3333445555554555555544
No 225
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=32.99 E-value=1.6e+02 Score=23.05 Aligned_cols=74 Identities=14% Similarity=0.170 Sum_probs=45.8
Q ss_pred cccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHH
Q 046553 138 RPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNME 216 (232)
Q Consensus 138 ~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~ 216 (232)
.|+.-.+..+|+.+.+ .-++ +. -..+.+.+.+.+++.|. -+-+-.+.+++..+.++ |.+....+.
T Consensus 78 yPWt~~~L~aa~el~ee~eeL--s~------deke~~~~sl~dL~~d~---PkT~vA~~rfKk~~~K~---g~~v~~~~~ 143 (158)
T PF10083_consen 78 YPWTENALEAANELIEEDEEL--SP------DEKEQFKESLPDLTKDT---PKTKVAATRFKKILSKA---GSIVGDAIR 143 (158)
T ss_pred CchHHHHHHHHHHHHHHhhcC--CH------HHHHHHHhhhHHHhhcC---CccHHHHHHHHHHHHHH---hHHHHHHHH
Confidence 5666677777776666 3222 22 23567899999998873 16667777777777666 444444555
Q ss_pred HHHHHHHhh
Q 046553 217 MLIEFVIQR 225 (232)
Q Consensus 217 ~~i~~l~~~ 225 (232)
+++-++.++
T Consensus 144 dIlVdv~SE 152 (158)
T PF10083_consen 144 DILVDVASE 152 (158)
T ss_pred HHHHHHHHH
Confidence 555555544
No 226
>PRK06932 glycerate dehydrogenase; Provisional
Probab=32.27 E-value=1.5e+02 Score=25.84 Aligned_cols=62 Identities=16% Similarity=0.165 Sum_probs=38.0
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchhhhhccc
Q 046553 32 PWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQVLLLSHR 111 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~ 111 (232)
.+.+-.+.+|+++ ..+.+.+...+++++.. ..... .. . ..++.+...+|+.+
T Consensus 147 gktvgIiG~G~IG-------~~va~~l~~fg~~V~~~-~~~~~----------~~---------~-~~~~~~l~ell~~s 198 (314)
T PRK06932 147 GSTLGVFGKGCLG-------TEVGRLAQALGMKVLYA-EHKGA----------SV---------C-REGYTPFEEVLKQA 198 (314)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhcCCCEEEEE-CCCcc----------cc---------c-ccccCCHHHHHHhC
Confidence 4667788888888 34445555678887643 21110 00 0 11356677899999
Q ss_pred CcceEEecCCch
Q 046553 112 AIGGFLTHCGWN 123 (232)
Q Consensus 112 ~~~~~I~hgG~~ 123 (232)
++ ++.|+-.+
T Consensus 199 Di--v~l~~Plt 208 (314)
T PRK06932 199 DI--VTLHCPLT 208 (314)
T ss_pred CE--EEEcCCCC
Confidence 98 88887543
No 227
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=32.12 E-value=31 Score=26.10 Aligned_cols=41 Identities=20% Similarity=0.222 Sum_probs=28.2
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHHHh-----hCCCcEEEEEcCCCC
Q 046553 34 SVIYACLGSICGLATWQLLELGLGLE-----ASSQPFIWVIRGGER 74 (232)
Q Consensus 34 ~vV~vs~GS~~~~~~~~~~~l~~~l~-----~~~~~~i~~~~~~~~ 74 (232)
.+|+|+.|+........+..++.... .....|+|+++....
T Consensus 3 ~vvlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~~~~ 48 (156)
T PF08030_consen 3 NVVLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRDADE 48 (156)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-TTT
T ss_pred EEEEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCchhh
Confidence 48999999988765666666666554 234699999987653
No 228
>PLN02929 NADH kinase
Probab=31.16 E-value=1.2e+02 Score=26.58 Aligned_cols=65 Identities=9% Similarity=0.124 Sum_probs=42.0
Q ss_pred ccCcceEEecCCchhHHHHHH---hCCCeeeccccc------chhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHH
Q 046553 110 HRAIGGFLTHCGWNSTLEGVS---AGVPLVTRPLFA------EQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKL 180 (232)
Q Consensus 110 ~~~~~~~I~hgG~~sv~eal~---~GvP~i~~P~~~------DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~v 180 (232)
.+++ +|+-||-||+..++. .++|++.+-... .+++|..-..+-+|.... ++.+++.+.+.++
T Consensus 64 ~~Dl--vi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~~~r~lGfL~~-------~~~~~~~~~L~~i 134 (301)
T PLN02929 64 DVDL--VVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFDARRSTGHLCA-------ATAEDFEQVLDDV 134 (301)
T ss_pred CCCE--EEEECCcHHHHHHHHHcCCCCcEEEEECCCcccccccccccccccccCcccccc-------CCHHHHHHHHHHH
Confidence 4455 999999999998854 368988875532 123333110013554332 5688899999999
Q ss_pred HcC
Q 046553 181 MDR 183 (232)
Q Consensus 181 l~d 183 (232)
+.+
T Consensus 135 l~g 137 (301)
T PLN02929 135 LFG 137 (301)
T ss_pred HcC
Confidence 874
No 229
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=30.54 E-value=2.1e+02 Score=27.20 Aligned_cols=27 Identities=19% Similarity=0.191 Sum_probs=21.8
Q ss_pred cceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 113 IGGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 113 ~~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
.+++++|.|-| .+++|...++|+|++.
T Consensus 69 ~gv~~~t~GPG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 69 MGMVIGQNGPGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred CEEEEEcCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 44588888844 7788999999999985
No 230
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=30.41 E-value=3e+02 Score=25.27 Aligned_cols=62 Identities=21% Similarity=0.164 Sum_probs=35.1
Q ss_pred EEecCCchhHHHHHHhCCCeee--cccccch------hHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcCC
Q 046553 116 FLTHCGWNSTLEGVSAGVPLVT--RPLFAEQ------FYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDRG 184 (232)
Q Consensus 116 ~I~hgG~~sv~eal~~GvP~i~--~P~~~DQ------~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d~ 184 (232)
+-|+ |..++..++.+|.|+.. ++.++|- -.|+.++..+ ..++ -..++.+++..+|.++++|.
T Consensus 248 VEt~-~a~~f~~sl~~g~~V~lp~i~s~AdglaV~~Vg~~tf~~a~~---~~d~---vvvV~~~ei~aaI~~l~ede 317 (457)
T KOG1250|consen 248 VETE-GAHSFNASLKAGKPVTLPKITSLADGLAVKTVGENTFELAQK---LVDR---VVVVEDDEIAAAILRLFEDE 317 (457)
T ss_pred Eeec-CcHHHHHHHhcCCeeecccccchhcccccchhhHHHHHHHHh---cCce---EEEeccHHHHHHHHHHHHhh
Confidence 3444 57788888888888654 3344442 2233333221 1111 11366778888888888864
No 231
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=30.39 E-value=1.9e+02 Score=20.09 Aligned_cols=34 Identities=18% Similarity=0.026 Sum_probs=23.9
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHhhC--CCcEEEE
Q 046553 35 VIYACLGSICGLATWQLLELGLGLEAS--SQPFIWV 68 (232)
Q Consensus 35 vV~vs~GS~~~~~~~~~~~l~~~l~~~--~~~~i~~ 68 (232)
+|+++.||.....+..+..+.+.+.+. ...+-+.
T Consensus 2 ivlv~hGS~~~~~~~~~~~l~~~l~~~~~~~~v~~a 37 (101)
T cd03416 2 LLLVGHGSRDPRAAEALEALAERLRERLPGDEVELA 37 (101)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHhhCCCCcEEEE
Confidence 789999998865566778888888653 3444444
No 232
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=29.90 E-value=1.6e+02 Score=28.06 Aligned_cols=27 Identities=11% Similarity=0.236 Sum_probs=21.6
Q ss_pred cceEEecCCc------hhHHHHHHhCCCeeecc
Q 046553 113 IGGFLTHCGW------NSTLEGVSAGVPLVTRP 139 (232)
Q Consensus 113 ~~~~I~hgG~------~sv~eal~~GvP~i~~P 139 (232)
.+++++|.|- +.+++|.+.++|+|++.
T Consensus 64 ~gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 64 VGVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred CEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 3448888774 48899999999999984
No 233
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=29.74 E-value=2.8e+02 Score=23.45 Aligned_cols=26 Identities=27% Similarity=0.327 Sum_probs=19.5
Q ss_pred eEEecCCchhHHHHHHh-----CCCeee-ccc
Q 046553 115 GFLTHCGWNSTLEGVSA-----GVPLVT-RPL 140 (232)
Q Consensus 115 ~~I~hgG~~sv~eal~~-----GvP~i~-~P~ 140 (232)
.+|.-||-||+.|++.. ..|.+. +|.
T Consensus 60 ~ivv~GGDGTl~~v~~~l~~~~~~~~lgiiP~ 91 (293)
T TIGR00147 60 TVIAGGGDGTINEVVNALIQLDDIPALGILPL 91 (293)
T ss_pred EEEEECCCChHHHHHHHHhcCCCCCcEEEEcC
Confidence 49999999999997543 345554 896
No 234
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=28.92 E-value=1.7e+02 Score=23.12 Aligned_cols=125 Identities=14% Similarity=0.150 Sum_probs=54.5
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcC-----CCeEEecccchhhhhc
Q 046553 35 VIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKG-----RGFIIRGWAPQVLLLS 109 (232)
Q Consensus 35 vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~-----~nv~v~~~~pq~~lL~ 109 (232)
.|+=+.|.....- ..+..++..+...+..+..+.+.+.+. ....+.+.+.- ..+....+.+...|.+
T Consensus 35 ~v~D~~g~~v~ly-pdv~~iL~~L~~~gv~lavASRt~~P~-------~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~ 106 (169)
T PF12689_consen 35 VVVDSRGEEVSLY-PDVPEILQELKERGVKLAVASRTDEPD-------WARELLKLLEIDDADGDGVPLIEYFDYLEIYP 106 (169)
T ss_dssp -EEETT--EE----TTHHHHHHHHHHCT--EEEEE--S-HH-------HHHHHHHHTT-C----------CCECEEEESS
T ss_pred EEEeCCCCEEEeC-cCHHHHHHHHHHCCCEEEEEECCCChH-------HHHHHHHhcCCCccccccccchhhcchhheec
Confidence 4444555555432 335667777777888877776654321 22333332221 1222223333334443
Q ss_pred ccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHHHH
Q 046553 110 HRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAIEK 179 (232)
Q Consensus 110 ~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i~~ 179 (232)
.+.. +| ...+++ ..|+|.--+=++.|+..|-..+.+ |+-.+.-++. ++.+.+.+.+++
T Consensus 107 gsK~----~H--f~~i~~--~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~G----lt~~~~~~gL~~ 165 (169)
T PF12689_consen 107 GSKT----TH--FRRIHR--KTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDG----LTWDEFERGLEK 165 (169)
T ss_dssp S-HH----HH--HHHHHH--HH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS------HHHHHHHHHH
T ss_pred CchH----HH--HHHHHH--hcCCChhHEEEecCchhcceeeEecCcEEEEeCCC----CCHHHHHHHHHH
Confidence 3222 22 112222 567776555567899999988888 7776666653 788888877754
No 235
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=28.77 E-value=3.5e+02 Score=22.60 Aligned_cols=45 Identities=4% Similarity=-0.079 Sum_probs=29.3
Q ss_pred hHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEE
Q 046553 22 QCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWV 68 (232)
Q Consensus 22 ~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~ 68 (232)
.+.+|+. +.+.++||-.-|........+..+..++.+.++.+...
T Consensus 23 ~~~~~~~--~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l 67 (233)
T PRK05282 23 LIAELLA--GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGI 67 (233)
T ss_pred HHHHHHc--CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEe
Confidence 4445555 24568888776655333555677888888888875544
No 236
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=28.59 E-value=1.8e+02 Score=25.33 Aligned_cols=60 Identities=15% Similarity=0.070 Sum_probs=36.2
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchhhhhccc
Q 046553 32 PWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQVLLLSHR 111 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~ 111 (232)
.+.+-.|.+|+++ ..+++.+...+++++..-..... . ... ..+.+...+|+.+
T Consensus 145 gktvGIiG~G~IG-------~~vA~~~~~fgm~V~~~d~~~~~----------~-------~~~---~~~~~l~ell~~s 197 (311)
T PRK08410 145 GKKWGIIGLGTIG-------KRVAKIAQAFGAKVVYYSTSGKN----------K-------NEE---YERVSLEELLKTS 197 (311)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhhcCCEEEEECCCccc----------c-------ccC---ceeecHHHHhhcC
Confidence 5678889999888 33444444568887644221110 0 011 1345677889999
Q ss_pred CcceEEecC
Q 046553 112 AIGGFLTHC 120 (232)
Q Consensus 112 ~~~~~I~hg 120 (232)
++ ++.|+
T Consensus 198 Dv--v~lh~ 204 (311)
T PRK08410 198 DI--ISIHA 204 (311)
T ss_pred CE--EEEeC
Confidence 98 77776
No 237
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=28.27 E-value=1.6e+02 Score=24.86 Aligned_cols=34 Identities=9% Similarity=0.084 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHHc--CChhhHHHHHHHHHHHHHHH
Q 046553 169 KREKVKEAIEKLMD--RGKQGEKRRKRTRQLGEIAN 202 (232)
Q Consensus 169 ~~~~l~~~i~~vl~--d~~~~~~~~~~a~~l~~~~~ 202 (232)
+...+.+.|.+.|. ||+..+.|++|++++.+.+.
T Consensus 103 n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~ 138 (264)
T cd01020 103 TMSKVANALADALVKADPDNKKYYQANAKKFVASLK 138 (264)
T ss_pred HHHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHH
Confidence 34455666666665 67777889999999888876
No 238
>PRK06457 pyruvate dehydrogenase; Provisional
Probab=27.98 E-value=2.2e+02 Score=26.74 Aligned_cols=27 Identities=7% Similarity=0.121 Sum_probs=21.7
Q ss_pred cceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 113 IGGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 113 ~~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
.+++++|.|.| .+++|...++|+|++.
T Consensus 65 pgv~~~t~GPG~~N~l~~l~~A~~~~~Pvl~i~ 97 (549)
T PRK06457 65 PSACMGTSGPGSIHLLNGLYDAKMDHAPVIALT 97 (549)
T ss_pred CeEEEeCCCCchhhhHHHHHHHHhcCCCEEEEe
Confidence 33488888844 7899999999999983
No 239
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=27.81 E-value=1.4e+02 Score=25.14 Aligned_cols=32 Identities=9% Similarity=0.020 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHc--CChhhHHHHHHHHHHHHHHH
Q 046553 171 EKVKEAIEKLMD--RGKQGEKRRKRTRQLGEIAN 202 (232)
Q Consensus 171 ~~l~~~i~~vl~--d~~~~~~~~~~a~~l~~~~~ 202 (232)
..+...|.+.|. ||+..+.|++|++++.+++.
T Consensus 122 ~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~ 155 (266)
T cd01018 122 KIMAENIYEALAELDPQNATYYQANLDALLAELD 155 (266)
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHH
Confidence 345555666554 58888889999999988876
No 240
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase. Members of this protein family are sulfoacetaldehyde acetyltransferase, an enzyme of taurine utilization. Taurine, or 2-aminoethanesulfonate, can be used by bacteria as a source of carbon, nitrogen, and sulfur.
Probab=27.77 E-value=2.4e+02 Score=26.75 Aligned_cols=27 Identities=15% Similarity=0.117 Sum_probs=21.8
Q ss_pred cceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 113 IGGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 113 ~~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
.+++++|.|.| .+++|...++|+|++.
T Consensus 65 ~gv~~~t~GPG~~N~~~gla~A~~~~~Pvl~I~ 97 (579)
T TIGR03457 65 MSMVIGQNGPGVTNCVTAIAAAYWAHTPVVIVT 97 (579)
T ss_pred CEEEEECCCchHHHHHHHHHHHhhcCCCEEEEe
Confidence 34488888855 7789999999999985
No 241
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=27.70 E-value=1.4e+02 Score=25.95 Aligned_cols=31 Identities=10% Similarity=0.007 Sum_probs=22.7
Q ss_pred HHHHHHHHHHc--CChhhHHHHHHHHHHHHHHH
Q 046553 172 KVKEAIEKLMD--RGKQGEKRRKRTRQLGEIAN 202 (232)
Q Consensus 172 ~l~~~i~~vl~--d~~~~~~~~~~a~~l~~~~~ 202 (232)
.+.+.|.+.|. ||+..+.|++|++++..++.
T Consensus 156 ~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~ 188 (311)
T PRK09545 156 ATAVAIHDKLVELMPQSKAKLDANLKDFEAQLA 188 (311)
T ss_pred HHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHH
Confidence 34555555554 68888889999999988876
No 242
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed
Probab=27.43 E-value=2.5e+02 Score=20.50 Aligned_cols=36 Identities=6% Similarity=-0.114 Sum_probs=25.0
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHHHhhC--CCcEEEE
Q 046553 33 WSVIYACLGSICGLATWQLLELGLGLEAS--SQPFIWV 68 (232)
Q Consensus 33 ~~vV~vs~GS~~~~~~~~~~~l~~~l~~~--~~~~i~~ 68 (232)
..+|+++.||.....+..+..+...+.+. ...+-+.
T Consensus 2 ~~lvlv~hGS~~~~~~~~~~~~~~~l~~~~~~~~v~~a 39 (126)
T PRK00923 2 LGLLLVGHGSRLPYNKEVVTKIAEKIKEKHPFYIVEVG 39 (126)
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 35899999998755567788888888653 3344444
No 243
>PF02016 Peptidase_S66: LD-carboxypeptidase; InterPro: IPR003507 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This signature is found in the Escherichia coli microcin C7 self-immunity protein mccF and in muramoyltetrapeptide carboxypeptidase (3.4.17.13 from EC, LD-carboxypeptidase A). LD-carboxypeptidase A belongs to MEROPS peptidase family S66 (clan SS). The entry also contains uncharacterised proteins including hypothetical proteins from various bacteria archaea.; PDB: 1ZRS_A 1ZL0_B 2AUM_B 2AUN_B 3TLG_A 3TLC_A 3TLZ_B 3TLY_B 3TLE_A 3TLB_B ....
Probab=27.35 E-value=71 Score=27.45 Aligned_cols=73 Identities=15% Similarity=0.211 Sum_probs=46.7
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchhhhhcccCcceEEecCCchhHH
Q 046553 47 ATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTL 126 (232)
Q Consensus 47 ~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~hgG~~sv~ 126 (232)
+.+....+.+++.......||..++.... .++.++++...+-.+|.. ||-.....+++
T Consensus 47 ~~~Ra~dL~~a~~d~~i~aI~~~rGGyg~--------------------~rlL~~ld~~~i~~~pK~--~iGySDiTaL~ 104 (284)
T PF02016_consen 47 DEERAEDLNEAFADPEIDAIWCARGGYGA--------------------NRLLPYLDYDAIRKNPKI--FIGYSDITALH 104 (284)
T ss_dssp HHHHHHHHHHHHHSTTEEEEEES--SS-G--------------------GGGGGGCHHHHHHHSG-E--EEE-GGGHHHH
T ss_pred HHHHHHHHHHHhcCCCCCEEEEeeccccH--------------------HHHHhcccccccccCCCE--EEEecchHHHH
Confidence 36667789999999999999988776532 123356666666666666 88888888877
Q ss_pred HHHHh--CCCeeecccc
Q 046553 127 EGVSA--GVPLVTRPLF 141 (232)
Q Consensus 127 eal~~--GvP~i~~P~~ 141 (232)
-+++. |.+.+--|+.
T Consensus 105 ~al~~~~g~~t~hGp~~ 121 (284)
T PF02016_consen 105 NALYAKTGLVTFHGPML 121 (284)
T ss_dssp HHHHHHHTBEEEES--H
T ss_pred HHHHHhCCCeEEEcchh
Confidence 77654 6777777764
No 244
>COG1422 Predicted membrane protein [Function unknown]
Probab=27.01 E-value=1.5e+02 Score=24.19 Aligned_cols=71 Identities=14% Similarity=0.143 Sum_probs=43.5
Q ss_pred hHHHHHHhCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHh
Q 046553 124 STLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRTRQLGEIANR 203 (232)
Q Consensus 124 sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~~~ 203 (232)
++.++++-+.-.+..|+..=++..--.+.- . +-..-+..-+++.+.|-++-+++++.++++.+++++
T Consensus 24 ~~~~~i~~~ln~~f~P~i~~~~p~lvilV~-------a------vi~gl~~~i~~~~liD~ekm~~~qk~m~efq~e~~e 90 (201)
T COG1422 24 SIRDGIGGALNVVFGPLLSPLPPHLVILVA-------A------VITGLYITILQKLLIDQEKMKELQKMMKEFQKEFRE 90 (201)
T ss_pred HHHHHHHHHHHHHHhhhccccccHHHHHHH-------H------HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 556666666666666654332222211111 0 122234555667788888888999999999999998
Q ss_pred hhcC
Q 046553 204 ATGV 207 (232)
Q Consensus 204 ~~~~ 207 (232)
+-+.
T Consensus 91 A~~~ 94 (201)
T COG1422 91 AQES 94 (201)
T ss_pred HHHh
Confidence 8444
No 245
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=26.97 E-value=3.5e+02 Score=23.31 Aligned_cols=22 Identities=23% Similarity=0.236 Sum_probs=16.1
Q ss_pred hhcccCcceEEecCC--chhHHHH
Q 046553 107 LLSHRAIGGFLTHCG--WNSTLEG 128 (232)
Q Consensus 107 lL~~~~~~~~I~hgG--~~sv~ea 128 (232)
...+|.+++++.|+| ..=..|+
T Consensus 187 a~~fP~l~IVl~H~G~~~p~~~~a 210 (293)
T COG2159 187 ARKFPELKIVLGHMGEDYPWELEA 210 (293)
T ss_pred HHHCCCCcEEEEecCCCCchhHHH
Confidence 456889999999999 4444444
No 246
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=26.51 E-value=5.4e+02 Score=24.12 Aligned_cols=142 Identities=13% Similarity=0.079 Sum_probs=80.5
Q ss_pred hHHHHhcCCCCCc-EEEEEeCCCCCC-CHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhc--CCCeE
Q 046553 22 QCLKWLDSWEPWS-VIYACLGSICGL-ATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAK--GRGFI 97 (232)
Q Consensus 22 ~l~~~l~~~~~~~-vV~vs~GS~~~~-~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~--~~nv~ 97 (232)
.+.+-+....+.+ .++..-|..... .-+.+...+..+.+.+.+++..-.+ ... +.+.+..... +.++.
T Consensus 281 ~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~g-d~~-------le~~~~~la~~~~~~~~ 352 (487)
T COG0297 281 ALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTG-DPE-------LEEALRALASRHPGRVL 352 (487)
T ss_pred HHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecC-cHH-------HHHHHHHHHHhcCceEE
Confidence 4444444432222 333344455542 2555666666666667777755444 211 4444443222 33555
Q ss_pred Eecccch-h--hhhcccCcceEEe-----cCCchhHHHHHHhCCCeeeccccc--ch----hHHHHHHHh-hhhhccccc
Q 046553 98 IRGWAPQ-V--LLLSHRAIGGFLT-----HCGWNSTLEGVSAGVPLVTRPLFA--EQ----FYNDKLAVQ-AAVTWGLED 162 (232)
Q Consensus 98 v~~~~pq-~--~lL~~~~~~~~I~-----hgG~~sv~eal~~GvP~i~~P~~~--DQ----~~nA~~v~~-G~g~~~~~~ 162 (232)
+.-|.+. . .+++.+++ |+- -||.+ =++++.+|.+-|+.|..+ |- ..++ ... |.|+....
T Consensus 353 ~~i~~~~~la~~i~agaD~--~lmPSrfEPcGL~-ql~amryGtvpIv~~tGGLadTV~~~~~~~--~~~~gtGf~f~~- 426 (487)
T COG0297 353 VVIGYDEPLAHLIYAGADV--ILMPSRFEPCGLT-QLYAMRYGTLPIVRETGGLADTVVDRNEWL--IQGVGTGFLFLQ- 426 (487)
T ss_pred EEeeecHHHHHHHHhcCCE--EEeCCcCcCCcHH-HHHHHHcCCcceEcccCCccceecCccchh--ccCceeEEEEec-
Confidence 5555543 2 35555555 543 36664 557999999888888752 32 2222 344 78877766
Q ss_pred CCCcccCHHHHHHHHHHHHc
Q 046553 163 KSGLVIKREKVKEAIEKLMD 182 (232)
Q Consensus 163 ~~~~~~~~~~l~~~i~~vl~ 182 (232)
.+++.+..++++.+.
T Consensus 427 -----~~~~~l~~al~rA~~ 441 (487)
T COG0297 427 -----TNPDHLANALRRALV 441 (487)
T ss_pred -----CCHHHHHHHHHHHHH
Confidence 489999999998876
No 247
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated
Probab=26.45 E-value=2.4e+02 Score=26.55 Aligned_cols=27 Identities=19% Similarity=0.241 Sum_probs=21.9
Q ss_pred cceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 113 IGGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 113 ~~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
.+++++|.|-| .+++|...++|+|++.
T Consensus 67 ~gv~~~t~GpG~~n~~~gla~A~~~~~Pvl~i~ 99 (563)
T PRK08527 67 VGVAIVTSGPGFTNAVTGLATAYMDSIPLVLIS 99 (563)
T ss_pred CEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 44488888844 8899999999999984
No 248
>PF01371 Trp_repressor: Trp repressor protein; InterPro: IPR000831 The Trp repressor (TrpR) binds to at least five operators in the Escherichia coli genome, repressing gene expression. The operators at which it binds vary considerably in DNA sequence and location within the promoter; when bound to the Trp operon it recognises the sequence 5'-ACTAGT-3' and acts to prevent the initiation of transcription. The TrpR controls the trpEDCBA (trpO) operon and the genes for trpR, aroH, mtr and aroL, which are involved in the biosynthesis and uptake of the amino acid tryptophan []. The repressor binds to the operators only in the presence of L-tryptophan, thereby controlling the intracellular level of its effector; the complex also regulates Trp repressor biosynthesis by binding to its own regulatory region. TrpR acts as a dimer that is composed of identical 6-helical subunits, where four of the helices form the core of the protein and intertwine with the corresponding helices from the other subunit.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 3FRW_H 3KOR_A 3SSW_N 1P6Z_N 1CO0_B 1JHG_A 1WRT_S 1WRS_R 1WRP_R 1RCS_B ....
Probab=26.44 E-value=1.9e+02 Score=20.30 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=28.4
Q ss_pred CHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHH
Q 046553 169 KREKVKEAIEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNME 216 (232)
Q Consensus 169 ~~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~ 216 (232)
+.++...-+..+++ +++.+++.+|..-..++++ +|-+++.+.
T Consensus 15 ~~ee~~~f~~dL~T-~~E~~~l~~R~~va~~lL~-----~g~syreIa 56 (87)
T PF01371_consen 15 DEEECYDFFEDLCT-PDELEALAQRWQVAKELLD-----EGKSYREIA 56 (87)
T ss_dssp CHHCHHHHHHHHSS-HHHHHHHHHHHHHHHHHHH-----TTSSHHHHH
T ss_pred CHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHH-----CCCCHHHHH
Confidence 56667777777777 7778888888777666665 444544443
No 249
>PRK06487 glycerate dehydrogenase; Provisional
Probab=26.40 E-value=2.2e+02 Score=24.84 Aligned_cols=61 Identities=15% Similarity=0.016 Sum_probs=37.0
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchhhhhccc
Q 046553 32 PWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQVLLLSHR 111 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~ 111 (232)
.+.+-.+.+|+++ .++++.+...+++++..-.... +. ...+++...+|+.+
T Consensus 148 gktvgIiG~G~IG-------~~vA~~l~~fgm~V~~~~~~~~----------~~------------~~~~~~l~ell~~s 198 (317)
T PRK06487 148 GKTLGLLGHGELG-------GAVARLAEAFGMRVLIGQLPGR----------PA------------RPDRLPLDELLPQV 198 (317)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhhCCCEEEEECCCCC----------cc------------cccccCHHHHHHhC
Confidence 4668888888888 3455555566888764322110 00 01245666788888
Q ss_pred CcceEEecCCch
Q 046553 112 AIGGFLTHCGWN 123 (232)
Q Consensus 112 ~~~~~I~hgG~~ 123 (232)
++ ++.|+-.+
T Consensus 199 Di--v~l~lPlt 208 (317)
T PRK06487 199 DA--LTLHCPLT 208 (317)
T ss_pred CE--EEECCCCC
Confidence 88 87777543
No 250
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated
Probab=26.14 E-value=2.1e+02 Score=26.98 Aligned_cols=27 Identities=26% Similarity=0.361 Sum_probs=21.7
Q ss_pred cceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 113 IGGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 113 ~~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
.+++++|.|-| .+++|...++|+|++.
T Consensus 68 ~gv~~~t~GpG~~N~l~~i~~A~~~~~Pvlvi~ 100 (574)
T PRK06882 68 VGCVLVTSGPGATNAITGIATAYTDSVPLVILS 100 (574)
T ss_pred CeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 44488888854 6899999999999984
No 251
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=26.12 E-value=2.6e+02 Score=21.10 Aligned_cols=47 Identities=6% Similarity=-0.133 Sum_probs=28.8
Q ss_pred hHHHHhcCCCCCcEEEEEeCCCCCC---CH----HHHHHHHHHHhh--CCCcEEEEEc
Q 046553 22 QCLKWLDSWEPWSVIYACLGSICGL---AT----WQLLELGLGLEA--SSQPFIWVIR 70 (232)
Q Consensus 22 ~l~~~l~~~~~~~vV~vs~GS~~~~---~~----~~~~~l~~~l~~--~~~~~i~~~~ 70 (232)
.+..++...+ .+|++.+|+.-.. +. +.+.+++..+.+ .+.+++|...
T Consensus 40 ~l~~~~~~~p--d~vvl~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~~~vi~~~~ 95 (169)
T cd01828 40 RLDEDVALQP--KAIFIMIGINDLAQGTSDEDIVANYRTILEKLRKHFPNIKIVVQSI 95 (169)
T ss_pred HHHHHhccCC--CEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 3444553322 5888999987763 22 334456666666 6788888754
No 252
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=26.09 E-value=1.6e+02 Score=25.16 Aligned_cols=31 Identities=6% Similarity=0.095 Sum_probs=23.3
Q ss_pred HHHHHHHHHHc--CChhhHHHHHHHHHHHHHHH
Q 046553 172 KVKEAIEKLMD--RGKQGEKRRKRTRQLGEIAN 202 (232)
Q Consensus 172 ~l~~~i~~vl~--d~~~~~~~~~~a~~l~~~~~ 202 (232)
.+.+.|.+.|. ||+..+.|++|++++.+++.
T Consensus 132 ~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~ 164 (286)
T cd01019 132 EVAQAVAEKLSALDPDNAATYAANLEAFNARLA 164 (286)
T ss_pred HHHHHHHHHHHHHCchhHHHHHHHHHHHHHHHH
Confidence 44555555554 58888899999999999887
No 253
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.95 E-value=2.6e+02 Score=22.22 Aligned_cols=94 Identities=16% Similarity=0.140 Sum_probs=56.2
Q ss_pred chhh-hhcccCcceEEecCC---chhHHHHHHhCCCeeecc-cccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHH
Q 046553 103 PQVL-LLSHRAIGGFLTHCG---WNSTLEGVSAGVPLVTRP-LFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEA 176 (232)
Q Consensus 103 pq~~-lL~~~~~~~~I~hgG---~~sv~eal~~GvP~i~~P-~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~ 176 (232)
+|.. |-.||++..-+--.| +.|..|-..+|.-.+-== +--=+..|+.+.++ |.-.++--+. .+.++|..+
T Consensus 64 ~rl~liraHPdLAgk~a~a~elta~S~~EQasAGLd~Ls~~E~a~f~~LN~aY~~rFgfPfI~aVkg----~~k~~Il~a 139 (176)
T COG3195 64 ERLALIRAHPDLAGKAAIAGELTAESTSEQASAGLDRLSPEEFARFTELNAAYVERFGFPFIIAVKG----NTKDTILAA 139 (176)
T ss_pred HHHHHHHhChhhHHHHHHHHHhhhhhHHHHHhcCcccCCHHHHHHHHHHHHHHHHhcCCceEEeecC----CCHHHHHHH
Confidence 4554 334777732222222 456777777765443210 01124679999999 9887665443 678999999
Q ss_pred HHHHHcCChhhHHHHHHHHHHHHHH
Q 046553 177 IEKLMDRGKQGEKRRKRTRQLGEIA 201 (232)
Q Consensus 177 i~~vl~d~~~~~~~~~~a~~l~~~~ 201 (232)
..+-|.|. +-+.++..+..+.+..
T Consensus 140 ~~~Rl~n~-~e~E~~tAl~eI~rIA 163 (176)
T COG3195 140 FERRLDND-REQEFATALAEIERIA 163 (176)
T ss_pred HHHHhccc-HHHHHHHHHHHHHHHH
Confidence 98888864 4445666665555543
No 254
>cd01145 TroA_c Periplasmic binding protein TroA_c. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=25.89 E-value=1.6e+02 Score=23.62 Aligned_cols=31 Identities=13% Similarity=0.129 Sum_probs=21.7
Q ss_pred HHHHHHHHHHc--CChhhHHHHHHHHHHHHHHH
Q 046553 172 KVKEAIEKLMD--RGKQGEKRRKRTRQLGEIAN 202 (232)
Q Consensus 172 ~l~~~i~~vl~--d~~~~~~~~~~a~~l~~~~~ 202 (232)
.+...|.+.|. ||+..+.|++|++++.+++.
T Consensus 119 ~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~ 151 (203)
T cd01145 119 ALAKALADALIELDPSEQEEYKENLRVFLAKLN 151 (203)
T ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHH
Confidence 34444444443 57777889999999888876
No 255
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated
Probab=25.80 E-value=3e+02 Score=25.94 Aligned_cols=80 Identities=14% Similarity=0.082 Sum_probs=44.7
Q ss_pred HHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHh-cCCCeEEecccc--------hhhhhcccCcceEEecC
Q 046553 50 QLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERA-KGRGFIIRGWAP--------QVLLLSHRAIGGFLTHC 120 (232)
Q Consensus 50 ~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~p--------q~~lL~~~~~~~~I~hg 120 (232)
....+++.|.+.|.+.++.+.+... +| +.... ..+++.++.-.. .-.-...-...+++.|.
T Consensus 11 ~a~~l~~~L~~~GV~~vFgvpG~~~--------~~--l~~~l~~~~~i~~v~~~hE~~A~~aAdgyar~tg~~~v~~vt~ 80 (568)
T PRK07449 11 WAAVILEELTRLGVRHVVIAPGSRS--------TP--LTLAAAEHPRLRLHTHFDERSAGFLALGLAKASKRPVAVIVTS 80 (568)
T ss_pred HHHHHHHHHHHcCCCEEEECCCCcc--------HH--HHHHHHhCCCcEEEeecCcccHHHHHHHHHHhhCCCEEEEECC
Confidence 3455777787888888887766642 11 22111 123333332111 00001111233478887
Q ss_pred Cch------hHHHHHHhCCCeeecc
Q 046553 121 GWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 121 G~~------sv~eal~~GvP~i~~P 139 (232)
|.| .+++|-..++|+|++.
T Consensus 81 GpG~~N~l~~i~~A~~~~~Pvl~Is 105 (568)
T PRK07449 81 GTAVANLYPAVIEAGLTGVPLIVLT 105 (568)
T ss_pred ccHHHhhhHHHHHHhhcCCcEEEEE
Confidence 844 8899999999999984
No 256
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=25.65 E-value=4.5e+02 Score=22.87 Aligned_cols=66 Identities=12% Similarity=0.122 Sum_probs=37.1
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeE-Eecccchhhhhcc
Q 046553 32 PWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFI-IRGWAPQVLLLSH 110 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~-v~~~~pq~~lL~~ 110 (232)
.+.+.++.+|+++ ..+.+.+...|++++..-..... . +++. +........+++.
T Consensus 136 g~tvgIvG~G~IG-------~~vA~~l~afG~~V~~~~~~~~~--------~----------~~~~~~~~~~~l~e~l~~ 190 (312)
T PRK15469 136 DFTIGILGAGVLG-------SKVAQSLQTWGFPLRCWSRSRKS--------W----------PGVQSFAGREELSAFLSQ 190 (312)
T ss_pred CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEEeCCCCC--------C----------CCceeecccccHHHHHhc
Confidence 4667788888888 44555555678886543221110 0 0111 1122334567888
Q ss_pred cCcceEEecCCchh
Q 046553 111 RAIGGFLTHCGWNS 124 (232)
Q Consensus 111 ~~~~~~I~hgG~~s 124 (232)
+++ ++.|+-.+.
T Consensus 191 aDv--vv~~lPlt~ 202 (312)
T PRK15469 191 TRV--LINLLPNTP 202 (312)
T ss_pred CCE--EEECCCCCH
Confidence 888 888776543
No 257
>PRK10637 cysG siroheme synthase; Provisional
Probab=25.63 E-value=4.7e+02 Score=24.05 Aligned_cols=36 Identities=6% Similarity=-0.061 Sum_probs=21.1
Q ss_pred HhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEE
Q 046553 26 WLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVI 69 (232)
Q Consensus 26 ~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~ 69 (232)
|++.. .++++.|..|.... ..+ ..|.+.+.++.+..
T Consensus 7 ~~~l~-~~~vlvvGgG~vA~---rk~----~~ll~~ga~v~vis 42 (457)
T PRK10637 7 FCQLR-DRDCLLVGGGDVAE---RKA----RLLLDAGARLTVNA 42 (457)
T ss_pred EEEcC-CCEEEEECCCHHHH---HHH----HHHHHCCCEEEEEc
Confidence 45554 46788777766652 222 44445777776654
No 258
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=25.51 E-value=4.3e+02 Score=22.57 Aligned_cols=54 Identities=19% Similarity=0.009 Sum_probs=35.0
Q ss_pred hHHHHHHhCCCe---eecccccchhHHHHHHHh-hhhhcccccCCCcccCHHHHHHHH
Q 046553 124 STLEGVSAGVPL---VTRPLFAEQFYNDKLAVQ-AAVTWGLEDKSGLVIKREKVKEAI 177 (232)
Q Consensus 124 sv~eal~~GvP~---i~~P~~~DQ~~nA~~v~~-G~g~~~~~~~~~~~~~~~~l~~~i 177 (232)
.+.-|...|+|. |..==.+.+..|...+++ ++.+.+..+..+...+.+.+..+.
T Consensus 162 ~~~~~~~~~~p~~~Iia~~GPfs~~~n~all~q~~id~vItK~SG~~Gg~~~Ki~aA~ 219 (257)
T COG2099 162 VLAKCEDLGVPPARIIAMRGPFSEEDNKALLEQYRIDVVVTKNSGGAGGTYEKIEAAR 219 (257)
T ss_pred HHHHHHhcCCChhhEEEecCCcChHHHHHHHHHhCCCEEEEccCCcccCcHHHHHHHH
Confidence 344566678773 333224688899999999 999988876532225566655553
No 259
>PRK12361 hypothetical protein; Provisional
Probab=25.46 E-value=5.1e+02 Score=24.36 Aligned_cols=28 Identities=21% Similarity=0.102 Sum_probs=22.1
Q ss_pred ceEEecCCchhHHHHHH----hCCCeeecccc
Q 046553 114 GGFLTHCGWNSTLEGVS----AGVPLVTRPLF 141 (232)
Q Consensus 114 ~~~I~hgG~~sv~eal~----~GvP~i~~P~~ 141 (232)
+.+|.-||-||+.|++. .++|+-++|..
T Consensus 299 d~Viv~GGDGTl~ev~~~l~~~~~~lgiiP~G 330 (547)
T PRK12361 299 DIVIACGGDGTVTEVASELVNTDITLGIIPLG 330 (547)
T ss_pred CEEEEECCCcHHHHHHHHHhcCCCCEEEecCC
Confidence 34999999999999863 35788888973
No 260
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=25.42 E-value=1.6e+02 Score=21.49 Aligned_cols=35 Identities=14% Similarity=0.175 Sum_probs=25.9
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcC
Q 046553 35 VIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRG 71 (232)
Q Consensus 35 vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~ 71 (232)
++++++||.+.. .-+..+.++|.+.|.+|.+.+..
T Consensus 1 Ili~~~Gt~Ghv--~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 1 ILIATGGTRGHV--YPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEEESSHHHH--HHHHHHHHHHHHTT-EEEEEETG
T ss_pred CEEEEcCChhHH--HHHHHHHHHHhccCCeEEEeecc
Confidence 578889998843 33567899999999999877653
No 261
>PRK11914 diacylglycerol kinase; Reviewed
Probab=24.95 E-value=3.8e+02 Score=22.87 Aligned_cols=26 Identities=15% Similarity=0.226 Sum_probs=21.7
Q ss_pred eEEecCCchhHHHHH----HhCCCeeeccc
Q 046553 115 GFLTHCGWNSTLEGV----SAGVPLVTRPL 140 (232)
Q Consensus 115 ~~I~hgG~~sv~eal----~~GvP~i~~P~ 140 (232)
.+|.-||-||+.|++ ..++|+-++|.
T Consensus 67 ~vvv~GGDGTi~evv~~l~~~~~~lgiiP~ 96 (306)
T PRK11914 67 ALVVVGGDGVISNALQVLAGTDIPLGIIPA 96 (306)
T ss_pred EEEEECCchHHHHHhHHhccCCCcEEEEeC
Confidence 399999999999986 34688888996
No 262
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=24.91 E-value=2.6e+02 Score=25.23 Aligned_cols=19 Identities=16% Similarity=0.142 Sum_probs=11.1
Q ss_pred ccchhhhhcccCcceEEecCC
Q 046553 101 WAPQVLLLSHRAIGGFLTHCG 121 (232)
Q Consensus 101 ~~pq~~lL~~~~~~~~I~hgG 121 (232)
+.+...++..+++ ++.|+-
T Consensus 158 ~~~L~ell~~sDi--I~lh~P 176 (378)
T PRK15438 158 FRSLDELVQEADI--LTFHTP 176 (378)
T ss_pred cCCHHHHHhhCCE--EEEeCC
Confidence 4455566666666 665553
No 263
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=24.86 E-value=3.4e+02 Score=21.26 Aligned_cols=29 Identities=17% Similarity=0.034 Sum_probs=17.6
Q ss_pred EEeCCCCCCCHHHHHHHHHHHhhCCCcEEEE
Q 046553 38 ACLGSICGLATWQLLELGLGLEASSQPFIWV 68 (232)
Q Consensus 38 vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~ 68 (232)
|-+||.. +.+.+++....|...+..+=..
T Consensus 3 IimGS~S--D~~~~~~a~~~L~~~gi~~dv~ 31 (156)
T TIGR01162 3 IIMGSDS--DLPTMKKAADILEEFGIPYELR 31 (156)
T ss_pred EEECcHh--hHHHHHHHHHHHHHcCCCeEEE
Confidence 4456665 4566677777777776654433
No 264
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed
Probab=24.79 E-value=2.5e+02 Score=26.33 Aligned_cols=26 Identities=19% Similarity=0.298 Sum_probs=21.2
Q ss_pred ceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 114 GGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 114 ~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
+++++|.|-| .+++|...++|+|++.
T Consensus 65 gv~~~t~GpG~~n~~~~l~~A~~~~~Pvl~i~ 96 (548)
T PRK08978 65 GVCIATSGPGATNLITGLADALLDSVPVVAIT 96 (548)
T ss_pred EEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 3488888744 7899999999999984
No 265
>PRK08051 fre FMN reductase; Validated
Probab=24.76 E-value=97 Score=25.33 Aligned_cols=39 Identities=15% Similarity=0.037 Sum_probs=21.3
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEc
Q 046553 32 PWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIR 70 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~ 70 (232)
.+++|+|+.||-.+.-...+..++..-......++|..+
T Consensus 102 ~~~~vliagG~GiaP~~~~l~~~~~~~~~~~v~l~~g~r 140 (232)
T PRK08051 102 ERPLLLIAGGTGFSYARSILLTALAQGPNRPITLYWGGR 140 (232)
T ss_pred CCcEEEEecCcCcchHHHHHHHHHHhCCCCcEEEEEEec
Confidence 468999999998865333333333321112334555544
No 266
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated
Probab=24.60 E-value=2.5e+02 Score=26.66 Aligned_cols=27 Identities=19% Similarity=0.315 Sum_probs=21.5
Q ss_pred cceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 113 IGGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 113 ~~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
.+++++|.|.| .+++|...++|+|++.
T Consensus 78 ~gv~~~t~GpG~~N~~~gla~A~~~~~Pvl~I~ 110 (570)
T PRK06725 78 VGVVFATSGPGATNLVTGLADAYMDSIPLVVIT 110 (570)
T ss_pred CeEEEECCCccHHHHHHHHHHHhhcCcCEEEEe
Confidence 44488888855 6789999999999984
No 267
>PRK09259 putative oxalyl-CoA decarboxylase; Validated
Probab=24.52 E-value=2.2e+02 Score=26.93 Aligned_cols=27 Identities=15% Similarity=0.133 Sum_probs=21.5
Q ss_pred cceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 113 IGGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 113 ~~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
.+++++|.|-| .+++|...++|+|++-
T Consensus 73 ~gv~~~t~GPG~~N~l~gl~~A~~~~~Pvl~I~ 105 (569)
T PRK09259 73 PGVCLTVSAPGFLNGLTALANATTNCFPMIMIS 105 (569)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHhcCCCEEEEE
Confidence 44488887744 7899999999999984
No 268
>PRK06456 acetolactate synthase catalytic subunit; Reviewed
Probab=24.40 E-value=2.5e+02 Score=26.49 Aligned_cols=26 Identities=12% Similarity=0.148 Sum_probs=21.0
Q ss_pred ceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 114 GGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 114 ~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
+++++|.|-| .+++|...++|+|++.
T Consensus 70 gv~~~t~GpG~~N~l~gi~~A~~~~~Pvl~i~ 101 (572)
T PRK06456 70 GVCTATSGPGTTNLVTGLITAYWDSSPVIAIT 101 (572)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHhhCCCEEEEe
Confidence 3477787744 7799999999999985
No 269
>COG0041 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]
Probab=24.33 E-value=3.6e+02 Score=21.25 Aligned_cols=136 Identities=13% Similarity=0.097 Sum_probs=69.8
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEE-EEcCCCCCccchhhhhhhhHHH---HhcCCCeEEecccchhhhhcc
Q 046553 35 VIYACLGSICGLATWQLLELGLGLEASSQPFIW-VIRGGERSQGLEKWIQEEGLEE---RAKGRGFIIRGWAPQVLLLSH 110 (232)
Q Consensus 35 vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~-~~~~~~~~~~~~~~~lp~~~~~---~~~~~nv~v~~~~pq~~lL~~ 110 (232)
.|-|-+||.. +.+.++...+.|.+++..+-. ++.... .|+.+.+ ....++
T Consensus 4 ~V~IIMGS~S--D~~~mk~Aa~~L~~fgi~ye~~VvSAHR---------TPe~m~~ya~~a~~~g--------------- 57 (162)
T COG0041 4 KVGIIMGSKS--DWDTMKKAAEILEEFGVPYEVRVVSAHR---------TPEKMFEYAEEAEERG--------------- 57 (162)
T ss_pred eEEEEecCcc--hHHHHHHHHHHHHHcCCCeEEEEEeccC---------CHHHHHHHHHHHHHCC---------------
Confidence 5677789887 456677777788777765543 333222 3443322 122222
Q ss_pred cCcceEEecCCchh---HHHHHHhCCCeeeccccc---chhHHHHHHHh---hhhh-cccccCCCcccCHHHHHHHHHHH
Q 046553 111 RAIGGFLTHCGWNS---TLEGVSAGVPLVTRPLFA---EQFYNDKLAVQ---AAVT-WGLEDKSGLVIKREKVKEAIEKL 180 (232)
Q Consensus 111 ~~~~~~I~hgG~~s---v~eal~~GvP~i~~P~~~---DQ~~nA~~v~~---G~g~-~~~~~~~~~~~~~~~l~~~i~~v 180 (232)
+++||.-.|.-. -+-|..--+|+|.+|... +-.+.-..+.+ |+-+ .+-..+ -.|..-+...|-.+
T Consensus 58 --~~viIAgAGgAAHLPGmvAa~T~lPViGVPv~s~~L~GlDSL~SiVQMP~GvPVaTvaIg~---a~NAallAa~ILa~ 132 (162)
T COG0041 58 --VKVIIAGAGGAAHLPGMVAAKTPLPVIGVPVQSKALSGLDSLLSIVQMPAGVPVATVAIGN---AANAALLAAQILAI 132 (162)
T ss_pred --CeEEEecCcchhhcchhhhhcCCCCeEeccCccccccchHHHHHHhcCCCCCeeEEEeecc---hhhHHHHHHHHHcC
Confidence 333555444211 112333468999999853 22333444555 5532 111111 13444444433333
Q ss_pred HcCChhhHHHHHHHHHHHHHHHhhhc
Q 046553 181 MDRGKQGEKRRKRTRQLGEIANRATG 206 (232)
Q Consensus 181 l~d~~~~~~~~~~a~~l~~~~~~~~~ 206 (232)
.|+ .++++..++.+..++.+.
T Consensus 133 -~d~----~l~~kl~~~r~~~~~~V~ 153 (162)
T COG0041 133 -KDP----ELAEKLAEFREAQTEEVL 153 (162)
T ss_pred -CCH----HHHHHHHHHHHHHHHHHH
Confidence 356 788888887777766543
No 270
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated
Probab=24.20 E-value=2.8e+02 Score=26.26 Aligned_cols=27 Identities=22% Similarity=0.313 Sum_probs=21.6
Q ss_pred cceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 113 IGGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 113 ~~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
.+++++|.|-| .+++|...++|+|++.
T Consensus 68 ~gv~~~t~GPG~~n~l~gi~~A~~~~~Pvl~i~ 100 (574)
T PRK07979 68 VGVVLVTSGPGATNAITGIATAYMDSIPLVVLS 100 (574)
T ss_pred ceEEEECCCccHhhhHHHHHHHhhcCCCEEEEE
Confidence 44588888855 6889999999999984
No 271
>PRK08199 thiamine pyrophosphate protein; Validated
Probab=24.04 E-value=2.2e+02 Score=26.76 Aligned_cols=27 Identities=11% Similarity=0.085 Sum_probs=21.8
Q ss_pred cceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 113 IGGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 113 ~~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
.+++++|.|-| .+++|...++|+|++-
T Consensus 72 ~gv~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i~ 104 (557)
T PRK08199 72 PGICFVTRGPGATNASIGVHTAFQDSTPMILFV 104 (557)
T ss_pred CEEEEeCCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 44488888854 7899999999999873
No 272
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=23.85 E-value=2e+02 Score=25.23 Aligned_cols=67 Identities=12% Similarity=0.085 Sum_probs=39.5
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHHh-hCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchhhhhcc
Q 046553 32 PWSVIYACLGSICGLATWQLLELGLGLE-ASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQVLLLSH 110 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~~~~~~~l~~~l~-~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~ 110 (232)
.+.+-.|.+|+++ ..+.+.+. ..+++++....... +... ...++ .+.+...+|..
T Consensus 145 gktvGIiG~G~IG-------~~va~~l~~~fgm~V~~~~~~~~-----------~~~~---~~~~~---~~~~l~ell~~ 200 (323)
T PRK15409 145 HKTLGIVGMGRIG-------MALAQRAHFGFNMPILYNARRHH-----------KEAE---ERFNA---RYCDLDTLLQE 200 (323)
T ss_pred CCEEEEEcccHHH-------HHHHHHHHhcCCCEEEEECCCCc-----------hhhH---HhcCc---EecCHHHHHHh
Confidence 4667789999888 33444444 56888774432211 1000 01122 24567789999
Q ss_pred cCcceEEecCCchh
Q 046553 111 RAIGGFLTHCGWNS 124 (232)
Q Consensus 111 ~~~~~~I~hgG~~s 124 (232)
+++ ++.|+-.+.
T Consensus 201 sDv--v~lh~plt~ 212 (323)
T PRK15409 201 SDF--VCIILPLTD 212 (323)
T ss_pred CCE--EEEeCCCCh
Confidence 998 888886553
No 273
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=23.84 E-value=4.4e+02 Score=23.40 Aligned_cols=103 Identities=20% Similarity=0.129 Sum_probs=56.6
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCCC---C-C--HHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhc
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSICG---L-A--TWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAK 92 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~~---~-~--~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~ 92 (232)
.|++..+-|.-.++.+.|.+=+=|..+ . + ......+++.|.+.+ .+..-+...+ ..+.++
T Consensus 168 pd~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g--iV~ipr~~~~----------~eife~-- 233 (346)
T COG1817 168 PDPEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG--IVLIPREKEQ----------AEIFEG-- 233 (346)
T ss_pred CCHHHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHhCc--EEEecCchhH----------HHHHhh--
Confidence 366777777766555666554444333 1 2 223556777776666 2323222221 111111
Q ss_pred CCCeEE-ecccchhhhhcccCcceEEecCCchhHHHHHHhCCCeeec
Q 046553 93 GRGFII-RGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTR 138 (232)
Q Consensus 93 ~~nv~v-~~~~pq~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~ 138 (232)
..|+.+ ..-++..++|=.+++ +|+-|| .--.||+..|+|.|-+
T Consensus 234 ~~n~i~pk~~vD~l~Llyya~l--vig~gg-TMarEaAlLGtpaIs~ 277 (346)
T COG1817 234 YRNIIIPKKAVDTLSLLYYATL--VIGAGG-TMAREAALLGTPAISC 277 (346)
T ss_pred hccccCCcccccHHHHHhhhhe--eecCCc-hHHHHHHHhCCceEEe
Confidence 122222 123455678888887 776554 4567999999999986
No 274
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=23.70 E-value=2.9e+02 Score=26.14 Aligned_cols=27 Identities=19% Similarity=0.257 Sum_probs=21.9
Q ss_pred cceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 113 IGGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 113 ~~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
.+++++|.|-| .+++|...++|+|++-
T Consensus 79 ~gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~It 111 (571)
T PRK07710 79 PGVVIATSGPGATNVVTGLADAMIDSLPLVVFT 111 (571)
T ss_pred CeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 44488888865 6889999999999984
No 275
>TIGR01319 glmL_fam conserved hypothetical protein. This small family includes, so far, an uncharacterized protein from E. coli O157:H7 and GlmL from Clostridium tetanomorphum and Clostridium cochlearium. GlmL is located between the genes for the two subunits, epsilon (GlmE) and sigma (GlmS), of the coenzyme-B12-dependent glutamate mutase (methylaspartate mutase), the first enzyme in a pathway of glutamate fermentation. Members shows significant sequence similarity to the hydantoinase branch of the hydantoinase/oxoprolinase family (pfam01968).
Probab=23.58 E-value=4e+02 Score=24.87 Aligned_cols=48 Identities=13% Similarity=-0.091 Sum_probs=33.1
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhC--CCcEEEEE
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEAS--SQPFIWVI 69 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~--~~~~i~~~ 69 (232)
.+.++.+..+.+|+ +|+++.|+-+.. .+.....++.+.+. ++.+|.+-
T Consensus 109 ~~~~l~~I~~~~PD--IILLaGGtDGG~-~e~~l~NA~~La~~~~~~pIIyAG 158 (463)
T TIGR01319 109 NNKDIEAIEESNLD--IILFAGGTDGGE-EECGIHNAKMLAEHGLDCAIIVAG 158 (463)
T ss_pred CHHHHHHHhhcCCC--EEEEeCCcCCCc-hHHHHHHHHHHHhcCCCCcEEEeC
Confidence 57788888888776 999999999863 44445555666554 44555443
No 276
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=23.42 E-value=1.7e+02 Score=17.52 Aligned_cols=25 Identities=24% Similarity=0.361 Sum_probs=16.1
Q ss_pred CHHHHHHHHHHHHcCChhhHHHHHHHHH
Q 046553 169 KREKVKEAIEKLMDRGKQGEKRRKRTRQ 196 (232)
Q Consensus 169 ~~~~l~~~i~~vl~d~~~~~~~~~~a~~ 196 (232)
+++.+..||..+.++. -++++.|++
T Consensus 1 tee~l~~Ai~~v~~g~---~S~r~AA~~ 25 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK---MSIRKAAKK 25 (45)
T ss_dssp -HHHHHHHHHHHHTTS---S-HHHHHHH
T ss_pred CHHHHHHHHHHHHhCC---CCHHHHHHH
Confidence 3678899999988641 266666554
No 277
>TIGR03837 efp_adjacent_2 conserved hypothetical protein, PP_1857 family. This model describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=23.41 E-value=2.7e+02 Score=25.13 Aligned_cols=100 Identities=19% Similarity=0.185 Sum_probs=61.0
Q ss_pred CCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHH---HHhc--CCCeEEecccchh---hhhcccCcce
Q 046553 44 CGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLE---ERAK--GRGFIIRGWAPQV---LLLSHRAIGG 115 (232)
Q Consensus 44 ~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~---~~~~--~~nv~v~~~~pq~---~lL~~~~~~~ 115 (232)
.+..+..+..+++.+.+.+..+...+...........| ++.... .... .-.+.+.+|+||. .+|-.|++
T Consensus 188 F~Ye~~al~~ll~~~~~~~~pv~lLvp~Gr~~~~v~~~-l~~~~~~~g~~~~~g~L~~~~LPf~~Q~~yD~LLW~cD~-- 264 (371)
T TIGR03837 188 FCYENAALPALLDALAQSGSPVHLLVPEGRALAAVAAW-LGDALLAAGDVHRRGALTVAVLPFVPQDDYDRLLWACDL-- 264 (371)
T ss_pred EecCChhHHHHHHHHHhCCCCeEEEecCCccHHHHHHH-hCccccCCccccccCceEEEEcCCCChhhHHHHHHhChh--
Confidence 55567778889999988877777666555432222222 211000 0001 1234456788885 58888887
Q ss_pred EEecCCchhHHHHHHhCCCeeecccccchhHHHH
Q 046553 116 FLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDK 149 (232)
Q Consensus 116 ~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~ 149 (232)
=+-+ |=-|+.-|..+|+|+|=-.+ =|.++|.
T Consensus 265 NfVR-GEDSFVRAqWAgkPfvWhIY--PQeddaH 295 (371)
T TIGR03837 265 NFVR-GEDSFVRAQWAGKPFVWHIY--PQEEDAH 295 (371)
T ss_pred cEee-chhHHHHHHHcCCCceeecc--cCchhhH
Confidence 4444 56799999999999986543 3444444
No 278
>PRK06546 pyruvate dehydrogenase; Provisional
Probab=23.38 E-value=3.6e+02 Score=25.61 Aligned_cols=26 Identities=19% Similarity=0.365 Sum_probs=20.3
Q ss_pred ceEEecCCc------hhHHHHHHhCCCeeecc
Q 046553 114 GGFLTHCGW------NSTLEGVSAGVPLVTRP 139 (232)
Q Consensus 114 ~~~I~hgG~------~sv~eal~~GvP~i~~P 139 (232)
.+++.|.|. +.+++|...++|+|++.
T Consensus 68 ~v~~v~~GpG~~N~~~gl~~A~~~~~Pvl~I~ 99 (578)
T PRK06546 68 AVCAGSCGPGNLHLINGLYDAHRSGAPVLAIA 99 (578)
T ss_pred eEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 347777764 37889999999999984
No 279
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed
Probab=23.35 E-value=3e+02 Score=25.95 Aligned_cols=27 Identities=19% Similarity=0.276 Sum_probs=21.5
Q ss_pred cceEEecCCc------hhHHHHHHhCCCeeecc
Q 046553 113 IGGFLTHCGW------NSTLEGVSAGVPLVTRP 139 (232)
Q Consensus 113 ~~~~I~hgG~------~sv~eal~~GvP~i~~P 139 (232)
.+++++|.|- +.+++|...++|+|++-
T Consensus 71 ~~v~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 103 (561)
T PRK06048 71 VGVCVATSGPGATNLVTGIATAYMDSVPIVALT 103 (561)
T ss_pred CeEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 3348888774 47899999999999984
No 280
>TIGR02418 acolac_catab acetolactate synthase, catabolic. Acetolactate synthase (EC 2.2.1.6) combines two molecules of pyruvate to yield 2-acetolactate with the release of CO2. This reaction may be involved in either valine biosynthesis (biosynthetic) or conversion of pyruvate to acetoin and possibly to 2,3-butanediol (catabolic). The biosynthetic type, described by TIGR00118, is also capable of forming acetohydroxybutyrate from pyruvate and 2-oxobutyrate for isoleucine biosynthesis. The family described here, part of the same larger family of thiamine pyrophosphate-dependent enzymes (pfam00205, pfam02776) is the catabolic form, generally found associated with in species with acetolactate decarboxylase and usually found in the same operon. The model may not encompass all catabolic acetolactate synthases, but rather one particular clade in the larger TPP-dependent enzyme family.
Probab=23.13 E-value=2.6e+02 Score=26.16 Aligned_cols=26 Identities=27% Similarity=0.236 Sum_probs=20.9
Q ss_pred ceEEecCCc------hhHHHHHHhCCCeeecc
Q 046553 114 GGFLTHCGW------NSTLEGVSAGVPLVTRP 139 (232)
Q Consensus 114 ~~~I~hgG~------~sv~eal~~GvP~i~~P 139 (232)
+++++|.|- +.+++|...++|+|++.
T Consensus 63 gv~~~t~GpG~~n~l~gl~~A~~~~~Pvl~I~ 94 (539)
T TIGR02418 63 GVALVTSGPGCSNLVTGLATANSEGDPVVAIG 94 (539)
T ss_pred eEEEECCCCCHhHHHHHHHHHhhcCCCEEEEe
Confidence 347788774 47889999999999984
No 281
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=23.04 E-value=5.4e+02 Score=23.36 Aligned_cols=79 Identities=10% Similarity=0.074 Sum_probs=50.9
Q ss_pred CCeEEecccch----hhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhhc-ccccCCCcc
Q 046553 94 RGFIIRGWAPQ----VLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVTW-GLEDKSGLV 167 (232)
Q Consensus 94 ~nv~v~~~~pq----~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~~-~~~~~~~~~ 167 (232)
.++.+. -.++ +.++.++++ +|.- =.-++.-|+++|+|.|.+- -|+.+...+++ |+--+ ++...
T Consensus 266 ~~i~~~-~d~~~~~~~~~l~~~dl--~Vg~-R~HsaI~al~~g~p~i~i~---Y~~K~~~l~~~~gl~~~~~~i~~---- 334 (385)
T COG2327 266 AEILVS-SDEYAEELGGILAACDL--IVGM-RLHSAIMALAFGVPAIAIA---YDPKVRGLMQDLGLPGFAIDIDP---- 334 (385)
T ss_pred cceEee-cchHHHHHHHHhccCce--EEee-hhHHHHHHHhcCCCeEEEe---ecHHHHHHHHHcCCCcccccCCC----
Confidence 455443 3344 446777776 5531 1346777999999999984 45666667777 65532 23332
Q ss_pred cCHHHHHHHHHHHHcC
Q 046553 168 IKREKVKEAIEKLMDR 183 (232)
Q Consensus 168 ~~~~~l~~~i~~vl~d 183 (232)
.+.+.+...+.+.+.+
T Consensus 335 ~~~~~l~~~~~e~~~~ 350 (385)
T COG2327 335 LDAEILSAVVLERLTK 350 (385)
T ss_pred CchHHHHHHHHHHHhc
Confidence 7888888888887764
No 282
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=22.54 E-value=4.7e+02 Score=22.00 Aligned_cols=105 Identities=15% Similarity=0.087 Sum_probs=61.5
Q ss_pred CCCCCChhhHHHHhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcC
Q 046553 14 RSTVDDDEQCLKWLDSWEPWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKG 93 (232)
Q Consensus 14 ~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~ 93 (232)
...+++-+++.+++...+ ...||++.||.. +..+.. ....+.++++.+-+..... ++ +.+
T Consensus 112 ~~~v~~~~eA~~~l~~~~-~~~iflttGsk~------L~~f~~-~~~~~~r~~~RvLp~~~~~------~g------~~~ 171 (249)
T PF02571_consen 112 WHYVDSYEEAAELLKELG-GGRIFLTTGSKN------LPPFVP-APLPGERLFARVLPTPESA------LG------FPP 171 (249)
T ss_pred EEEeCCHHHHHHHHhhcC-CCCEEEeCchhh------HHHHhh-cccCCCEEEEEECCCcccc------CC------CCh
Confidence 344556778888886653 357889988876 344444 3345667776654332110 11 113
Q ss_pred CCeEEe-cccc---hhhhhcccCcceEEecCCch-----hHHHHHHhCCCeeec
Q 046553 94 RGFIIR-GWAP---QVLLLSHRAIGGFLTHCGWN-----STLEGVSAGVPLVTR 138 (232)
Q Consensus 94 ~nv~v~-~~~p---q~~lL~~~~~~~~I~hgG~~-----sv~eal~~GvP~i~~ 138 (232)
.++... +-.. ...++.+..+.++||.=..+ -+..|...|+|+|++
T Consensus 172 ~~iia~~GPfs~e~n~al~~~~~i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI 225 (249)
T PF02571_consen 172 KNIIAMQGPFSKELNRALFRQYGIDVLVTKESGGSGFDEKIEAARELGIPVIVI 225 (249)
T ss_pred hhEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCchhhHHHHHHHHHcCCeEEEE
Confidence 344332 2111 24688888888899864322 255678899999887
No 283
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=22.49 E-value=96 Score=27.03 Aligned_cols=37 Identities=22% Similarity=0.279 Sum_probs=29.5
Q ss_pred hhcccCcceEEecCCchhHHHHHH----hCCCeeecccccc
Q 046553 107 LLSHRAIGGFLTHCGWNSTLEGVS----AGVPLVTRPLFAE 143 (232)
Q Consensus 107 lL~~~~~~~~I~hgG~~sv~eal~----~GvP~i~~P~~~D 143 (232)
.|..-.+..+|.=||.+|+.-|.. +++|+|.+|-..|
T Consensus 86 ~l~~~~Id~Li~IGGdgs~~~a~~L~e~~~i~vigiPkTID 126 (301)
T TIGR02482 86 NLKKLGIEGLVVIGGDGSYTGAQKLYEEGGIPVIGLPGTID 126 (301)
T ss_pred HHHHcCCCEEEEeCCchHHHHHHHHHHhhCCCEEeeccccc
Confidence 566667888999999999877643 7999999997433
No 284
>PF04895 DUF651: Archaeal protein of unknown function (DUF651); InterPro: IPR006979 This conserved region is found in the C-terminal region of a number of conserved archaeal proteins of unknown function.
Probab=22.31 E-value=1.7e+02 Score=21.56 Aligned_cols=57 Identities=12% Similarity=0.098 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHcC-ChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHhhhccCCC
Q 046553 171 EKVKEAIEKLMDR-GKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQRTRGQQF 231 (232)
Q Consensus 171 ~~l~~~i~~vl~d-~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~~~~~~~~ 231 (232)
..+++.+++.|.+ +...+.+.+....++..++.. -..+..-..++..+.....+..|
T Consensus 53 W~VRE~vR~A~~~~p~~f~~l~eAl~~~~~~l~~~----~~~w~~~s~ll~~~~~Q~tL~~F 110 (110)
T PF04895_consen 53 WQVRENVRKAMKGKPEKFETLEEALEYVSSRLKLP----IKEWLRKSKLLKRIRRQKTLDDF 110 (110)
T ss_pred ehHHHHHHHHHhCCCcccCCHHHHHHHHHHHhCCC----HHHHHHHhHHHHHHhcccccccC
Confidence 4688888888875 566667888888888887532 22344445666666554444444
No 285
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=22.30 E-value=3.4e+02 Score=21.01 Aligned_cols=31 Identities=6% Similarity=0.031 Sum_probs=20.2
Q ss_pred cccCcceEEecCCchh-HHH----HHHhCCCeeecc
Q 046553 109 SHRAIGGFLTHCGWNS-TLE----GVSAGVPLVTRP 139 (232)
Q Consensus 109 ~~~~~~~~I~hgG~~s-v~e----al~~GvP~i~~P 139 (232)
...++-++|++.|.+. +.+ |-..|+|+|.+=
T Consensus 71 ~~~Dv~I~iS~sG~t~~~i~~~~~ak~~g~~ii~IT 106 (179)
T TIGR03127 71 KKGDLLIAISGSGETESLVTVAKKAKEIGATVAAIT 106 (179)
T ss_pred CCCCEEEEEeCCCCcHHHHHHHHHHHHCCCeEEEEE
Confidence 3445556888888542 233 466889998874
No 286
>PF02514 CobN-Mg_chel: CobN/Magnesium Chelatase; InterPro: IPR003672 This family contains a domain common to the cobN protein and to magnesium protoporphyrin chelatase. CobN may play a role in cobalt insertion reactions and is implicated in the conversion of precorrin-2 to cobyrinic acid in cobalamin biosynthesis []. Magnesium protoporphyrin chelatase is involved in chlorophyll biosynthesis as the third subunit of light-independent protochlorophyllide reductase in bacteria and plants [].; GO: 0009058 biosynthetic process
Probab=22.27 E-value=5.5e+02 Score=26.85 Aligned_cols=52 Identities=19% Similarity=0.043 Sum_probs=40.1
Q ss_pred ChhhHHHHhcCC----CCCcEEEEEeCCCCCC--CHHHHHHHHHHHhhCCCcEEEEEc
Q 046553 19 DDEQCLKWLDSW----EPWSVIYACLGSICGL--ATWQLLELGLGLEASSQPFIWVIR 70 (232)
Q Consensus 19 ~~~~l~~~l~~~----~~~~vV~vs~GS~~~~--~~~~~~~l~~~l~~~~~~~i~~~~ 70 (232)
+-++..+|.... +.+|+|-|.|...... +...+.+++++|++.|+.++-+..
T Consensus 53 ~~~eYl~w~~~~~~~~~~~P~VgIlfyrs~~~~g~~~~vdaLI~~LE~~G~nvipvf~ 110 (1098)
T PF02514_consen 53 SLEEYLAWYRKRGRYDPNRPTVGILFYRSYWLSGNTAVVDALIRALEERGLNVIPVFC 110 (1098)
T ss_pred CHHHHHHHHhhhcccCCCCCEEEEEeehhhhhcCCcHHHHHHHHHHHHCCCeEEEEEe
Confidence 467888998753 5789998888766653 367788999999999998886664
No 287
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=22.14 E-value=8e+02 Score=24.56 Aligned_cols=34 Identities=9% Similarity=-0.150 Sum_probs=26.4
Q ss_pred hhhcccCcceEEec-----CCchhHHHHHHhCCCeeeccc
Q 046553 106 LLLSHRAIGGFLTH-----CGWNSTLEGVSAGVPLVTRPL 140 (232)
Q Consensus 106 ~lL~~~~~~~~I~h-----gG~~sv~eal~~GvP~i~~P~ 140 (232)
.|.+.+++-+..+. ||.+.+. |+..|++.+.+--
T Consensus 562 ~LvaG~DvwLn~prrp~EAsGTSgMK-A~~NG~LnlSvlD 600 (778)
T cd04299 562 HLVQGVDVWLNTPRRPLEASGTSGMK-AALNGGLNLSVLD 600 (778)
T ss_pred HHHhhhhhcccCCCCCCCCCccchHH-HHHcCCeeeeccc
Confidence 47788888777888 8886666 5569999998764
No 288
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=22.03 E-value=2.3e+02 Score=21.09 Aligned_cols=63 Identities=14% Similarity=0.045 Sum_probs=38.3
Q ss_pred HHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchhhhhcccCcceEEecCCch
Q 046553 51 LLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWN 123 (232)
Q Consensus 51 ~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~hgG~~ 123 (232)
...++.++...++.-|..++.... -.+.+.+.....++....|-.....+..+++ +|+--+.+
T Consensus 24 ar~v~~~L~~~g~~~i~i~nRt~~--------ra~~l~~~~~~~~~~~~~~~~~~~~~~~~Di--vI~aT~~~ 86 (135)
T PF01488_consen 24 ARAVAAALAALGAKEITIVNRTPE--------RAEALAEEFGGVNIEAIPLEDLEEALQEADI--VINATPSG 86 (135)
T ss_dssp HHHHHHHHHHTTSSEEEEEESSHH--------HHHHHHHHHTGCSEEEEEGGGHCHHHHTESE--EEE-SSTT
T ss_pred HHHHHHHHHHcCCCEEEEEECCHH--------HHHHHHHHcCccccceeeHHHHHHHHhhCCe--EEEecCCC
Confidence 366778888888885555554321 1133444444556777777666678888888 77755443
No 289
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated
Probab=21.96 E-value=4.1e+02 Score=25.35 Aligned_cols=27 Identities=22% Similarity=0.287 Sum_probs=21.8
Q ss_pred cceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 113 IGGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 113 ~~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
.+++++|.|-| .+++|...++|+|++.
T Consensus 75 ~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~i~ 107 (595)
T PRK09107 75 PGVVLVTSGPGATNAVTPLQDALMDSIPLVCIT 107 (595)
T ss_pred CEEEEECCCccHhHHHHHHHHHhhcCCCEEEEE
Confidence 44488888854 7889999999999984
No 290
>PRK13059 putative lipid kinase; Reviewed
Probab=21.93 E-value=4e+02 Score=22.73 Aligned_cols=26 Identities=19% Similarity=0.166 Sum_probs=21.0
Q ss_pred eEEecCCchhHHHHH---H---hCCCeeeccc
Q 046553 115 GFLTHCGWNSTLEGV---S---AGVPLVTRPL 140 (232)
Q Consensus 115 ~~I~hgG~~sv~eal---~---~GvP~i~~P~ 140 (232)
.+|.-||-||+.|++ . .++|+-++|.
T Consensus 59 ~vi~~GGDGTv~evv~gl~~~~~~~~lgviP~ 90 (295)
T PRK13059 59 YILIAGGDGTVDNVVNAMKKLNIDLPIGILPV 90 (295)
T ss_pred EEEEECCccHHHHHHHHHHhcCCCCcEEEECC
Confidence 499999999988874 2 2488888997
No 291
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=21.84 E-value=2.6e+02 Score=24.59 Aligned_cols=65 Identities=18% Similarity=0.202 Sum_probs=39.1
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchhhhhcccC
Q 046553 33 WSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQVLLLSHRA 112 (232)
Q Consensus 33 ~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~ 112 (232)
+.+=.+.+|.++ .++.+-+...+++++.-..... + +. . .. .-..|++...+|..++
T Consensus 147 ktvGIiG~GrIG-------~avA~r~~~Fgm~v~y~~~~~~-~---------~~-~-----~~-~~~~y~~l~ell~~sD 202 (324)
T COG1052 147 KTLGIIGLGRIG-------QAVARRLKGFGMKVLYYDRSPN-P---------EA-E-----KE-LGARYVDLDELLAESD 202 (324)
T ss_pred CEEEEECCCHHH-------HHHHHHHhcCCCEEEEECCCCC-h---------HH-H-----hh-cCceeccHHHHHHhCC
Confidence 445566777766 3445555566899776655432 1 10 0 00 1135777888999999
Q ss_pred cceEEecCCch
Q 046553 113 IGGFLTHCGWN 123 (232)
Q Consensus 113 ~~~~I~hgG~~ 123 (232)
+ ++-||..+
T Consensus 203 i--i~l~~Plt 211 (324)
T COG1052 203 I--ISLHCPLT 211 (324)
T ss_pred E--EEEeCCCC
Confidence 8 88887543
No 292
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated
Probab=21.74 E-value=3.7e+02 Score=25.40 Aligned_cols=27 Identities=19% Similarity=0.298 Sum_probs=21.6
Q ss_pred cceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 113 IGGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 113 ~~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
.+++++|.|-| .+++|...++|+|++.
T Consensus 68 ~gv~~~t~GpG~~n~l~gia~A~~~~~Pvl~i~ 100 (572)
T PRK08979 68 VGVVLVTSGPGATNTITGIATAYMDSIPMVVLS 100 (572)
T ss_pred CeEEEECCCchHhHHHHHHHHHhhcCCCEEEEe
Confidence 44488887754 7889999999999984
No 293
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=21.74 E-value=2.1e+02 Score=24.27 Aligned_cols=31 Identities=13% Similarity=0.067 Sum_probs=22.6
Q ss_pred HHHHHHHHHHc--CChhhHHHHHHHHHHHHHHH
Q 046553 172 KVKEAIEKLMD--RGKQGEKRRKRTRQLGEIAN 202 (232)
Q Consensus 172 ~l~~~i~~vl~--d~~~~~~~~~~a~~l~~~~~ 202 (232)
.+...|.+.|. ||+....|++|++++..++.
T Consensus 124 ~~a~~Ia~~L~~~dP~~~~~y~~N~~~~~~~L~ 156 (282)
T cd01017 124 QQVENIKDALIKLDPDNKEYYEKNAAAYAKKLE 156 (282)
T ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHH
Confidence 34555555554 67777889999999988876
No 294
>cd01147 HemV-2 Metal binding protein HemV-2. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=21.36 E-value=3.7e+02 Score=21.89 Aligned_cols=30 Identities=10% Similarity=0.143 Sum_probs=20.6
Q ss_pred ccCcceEEecCCchh--HHHHH-H-hCCCeeecccc
Q 046553 110 HRAIGGFLTHCGWNS--TLEGV-S-AGVPLVTRPLF 141 (232)
Q Consensus 110 ~~~~~~~I~hgG~~s--v~eal-~-~GvP~i~~P~~ 141 (232)
+|++ +|...+... ..+.+ . +|+|++.++..
T Consensus 74 ~PDL--Ii~~~~~~~~~~~~~l~~~~gipvv~~~~~ 107 (262)
T cd01147 74 KPDV--VIDVGSDDPTSIADDLQKKTGIPVVVLDGG 107 (262)
T ss_pred CCCE--EEEecCCccchhHHHHHHhhCCCEEEEecC
Confidence 7777 777655443 45555 3 89999998864
No 295
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed.
Probab=21.34 E-value=3.4e+02 Score=25.53 Aligned_cols=27 Identities=19% Similarity=0.283 Sum_probs=21.6
Q ss_pred cceEEecCCc------hhHHHHHHhCCCeeecc
Q 046553 113 IGGFLTHCGW------NSTLEGVSAGVPLVTRP 139 (232)
Q Consensus 113 ~~~~I~hgG~------~sv~eal~~GvP~i~~P 139 (232)
.+++++|.|- +.+++|...++|+|++.
T Consensus 65 ~gv~~~t~GpG~~n~l~~i~~A~~~~~Pvl~i~ 97 (558)
T TIGR00118 65 VGVVLVTSGPGATNLVTGIATAYMDSIPMVVFT 97 (558)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 3448888774 47899999999999984
No 296
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=21.26 E-value=1.6e+02 Score=25.01 Aligned_cols=53 Identities=11% Similarity=-0.005 Sum_probs=36.4
Q ss_pred hhhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHh-hhhh--cccccCCCcccCHHHHHHHHHHHH
Q 046553 105 VLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQ-AAVT--WGLEDKSGLVIKREKVKEAIEKLM 181 (232)
Q Consensus 105 ~~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~-G~g~--~~~~~~~~~~~~~~~l~~~i~~vl 181 (232)
...|+.+.+ ++|--||-||-. +..+.+ |+|. .++.++ +.-.++.+.+..++
T Consensus 25 lekl~~~~V-~VvGiGGVGSw~---------------------veALaRsGig~itlID~D~----v~vTN~NRQi~A~~ 78 (263)
T COG1179 25 LEKLKQAHV-CVVGIGGVGSWA---------------------VEALARSGIGRITLIDMDD----VCVTNTNRQIHALL 78 (263)
T ss_pred HHHHhhCcE-EEEecCchhHHH---------------------HHHHHHcCCCeEEEEeccc----ccccccchhhHhhh
Confidence 356666666 567777777644 455667 7776 445554 78888888888888
Q ss_pred cC
Q 046553 182 DR 183 (232)
Q Consensus 182 ~d 183 (232)
.+
T Consensus 79 ~~ 80 (263)
T COG1179 79 GD 80 (263)
T ss_pred hh
Confidence 75
No 297
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=21.16 E-value=4.2e+02 Score=20.96 Aligned_cols=44 Identities=11% Similarity=0.060 Sum_probs=26.5
Q ss_pred eEEecCCchhHHHH-------------HH--hCCCeeecccccch-------hHHHHHHHh-hhhhc
Q 046553 115 GFLTHCGWNSTLEG-------------VS--AGVPLVTRPLFAEQ-------FYNDKLAVQ-AAVTW 158 (232)
Q Consensus 115 ~~I~hgG~~sv~ea-------------l~--~GvP~i~~P~~~DQ-------~~nA~~v~~-G~g~~ 158 (232)
.+|.-|-+||+... +. .++|+++.|-.... ..|-..+.+ |+-+.
T Consensus 80 ~vVaPaSanTlakiA~GiaDnLlt~~a~a~~~~~pv~i~PaMn~~M~~~p~~~~nl~~L~~~G~~vi 146 (177)
T TIGR02113 80 FLVAPASANTIAHLAHGFADNIVTSVALALPPETPKLIAPAMNTKMYQNPITQRNIKILKKIGYQEI 146 (177)
T ss_pred EEEEeCCHHHHHHHHcCcCCcHHHHHHHHcCCCCCEEEEeCCCHHHhCCHHHHHHHHHHHHCCCEEE
Confidence 56777766644322 23 37999999954322 346666666 76553
No 298
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=21.00 E-value=1.9e+02 Score=25.69 Aligned_cols=61 Identities=8% Similarity=0.123 Sum_probs=40.2
Q ss_pred hhhcccCcceEEecCCchhHHHHHHhCCCeeecccccchhHHHHHHHhhhhhcccccCCCcccCHHHHHHHHHHHHcCCh
Q 046553 106 LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTRPLFAEQFYNDKLAVQAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGK 185 (232)
Q Consensus 106 ~lL~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d~~ 185 (232)
.++.|.++=++.-.||+||+...+.+ ..+ +++.++|...++..|..-
T Consensus 96 SYFK~sDLWIVMEYCGAGSiSDI~R~----------------------------R~K----~L~E~EIs~iL~~TLKGL- 142 (502)
T KOG0574|consen 96 SYFKHSDLWIVMEYCGAGSISDIMRA----------------------------RRK----PLSEQEISAVLRDTLKGL- 142 (502)
T ss_pred hhccCCceEeehhhcCCCcHHHHHHH----------------------------hcC----CccHHHHHHHHHHHHhHH-
Confidence 56788888667789999999987544 233 277777777777776644
Q ss_pred hhHHHHHHHHHHHHHHH
Q 046553 186 QGEKRRKRTRQLGEIAN 202 (232)
Q Consensus 186 ~~~~~~~~a~~l~~~~~ 202 (232)
.|-.-.+++..-++
T Consensus 143 ---~YLH~~~KIHRDIK 156 (502)
T KOG0574|consen 143 ---QYLHDLKKIHRDIK 156 (502)
T ss_pred ---HHHHHHHHHHhhcc
Confidence 44444444444443
No 299
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=20.96 E-value=3.4e+02 Score=19.81 Aligned_cols=48 Identities=13% Similarity=0.007 Sum_probs=30.3
Q ss_pred ChhhHHHHhcCCCCCcEEEEEeCCCCCC-CHHHHHHHHHHHhhCCCcEE-EEEc
Q 046553 19 DDEQCLKWLDSWEPWSVIYACLGSICGL-ATWQLLELGLGLEASSQPFI-WVIR 70 (232)
Q Consensus 19 ~~~~l~~~l~~~~~~~vV~vs~GS~~~~-~~~~~~~l~~~l~~~~~~~i-~~~~ 70 (232)
+.++...|+... -++++.|-.... +...+..+++.+.+.++--+ +.++
T Consensus 32 e~~d~~~~l~~g----Elvlttg~~~~~~~~~~~~~~i~~L~~~~~agL~i~~~ 81 (123)
T PF07905_consen 32 EAPDPSDWLRGG----ELVLTTGYALRDDDEEELREFIRELAEKGAAGLGIKTG 81 (123)
T ss_pred ecCCHHHhCCCC----eEEEECCcccCCCCHHHHHHHHHHHHHCCCeEEEEecc
Confidence 345677887653 344555555554 45668889999988876444 4444
No 300
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=20.90 E-value=95 Score=26.25 Aligned_cols=28 Identities=14% Similarity=0.157 Sum_probs=22.0
Q ss_pred cCcceEEecCCchhHHHHHHh----CCCeeeccc
Q 046553 111 RAIGGFLTHCGWNSTLEGVSA----GVPLVTRPL 140 (232)
Q Consensus 111 ~~~~~~I~hgG~~sv~eal~~----GvP~i~~P~ 140 (232)
+++ +|+-||-||+..++.. ++|++.+-.
T Consensus 26 ~Dl--vi~iGGDGTlL~a~~~~~~~~~PvlGIN~ 57 (246)
T PRK04761 26 ADV--IVALGGDGFMLQTLHRYMNSGKPVYGMNR 57 (246)
T ss_pred CCE--EEEECCCHHHHHHHHHhcCCCCeEEEEeC
Confidence 455 9999999999988554 678887743
No 301
>PRK08266 hypothetical protein; Provisional
Probab=20.87 E-value=3.8e+02 Score=25.07 Aligned_cols=26 Identities=15% Similarity=0.121 Sum_probs=21.2
Q ss_pred ceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 114 GGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 114 ~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
+++++|.|.| .+++|...++|+|++.
T Consensus 70 ~v~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i~ 101 (542)
T PRK08266 70 GVCSVVPGPGVLNAGAALLTAYGCNSPVLCLT 101 (542)
T ss_pred eEEEECCCCcHHHHHHHHHHHHhhCCCEEEEe
Confidence 3478888744 8899999999999984
No 302
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed
Probab=20.81 E-value=4e+02 Score=25.49 Aligned_cols=28 Identities=18% Similarity=0.228 Sum_probs=22.4
Q ss_pred CcceEEecCCch------hHHHHHHhCCCeeecc
Q 046553 112 AIGGFLTHCGWN------STLEGVSAGVPLVTRP 139 (232)
Q Consensus 112 ~~~~~I~hgG~~------sv~eal~~GvP~i~~P 139 (232)
..+++++|.|-| .+++|...++|+|++-
T Consensus 85 k~gv~~~t~GPG~~n~l~gl~~A~~d~~Pvl~i~ 118 (616)
T PRK07418 85 KVGVCFGTSGPGATNLVTGIATAQMDSVPMVVIT 118 (616)
T ss_pred CCeEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 344588888844 7899999999999983
No 303
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=20.80 E-value=58 Score=26.86 Aligned_cols=22 Identities=9% Similarity=-0.135 Sum_probs=18.8
Q ss_pred ceEEecCCchhHHHHHHhCCCe
Q 046553 114 GGFLTHCGWNSTLEGVSAGVPL 135 (232)
Q Consensus 114 ~~~I~hgG~~sv~eal~~GvP~ 135 (232)
-++|+|||...+.-+...|.|.
T Consensus 177 vlvVsHg~vir~ll~~~~~~~~ 198 (228)
T PRK14116 177 VIIAAHGNSLRALTKYIENISD 198 (228)
T ss_pred EEEEcChHHHHHHHHHHhCCCH
Confidence 3699999999998888888774
No 304
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=20.78 E-value=3.2e+02 Score=24.01 Aligned_cols=103 Identities=18% Similarity=0.088 Sum_probs=55.8
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCccchhhhhhhhHHHHhcCCCeEEecccchhhhhccc
Q 046553 32 PWSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGLEERAKGRGFIIRGWAPQVLLLSHR 111 (232)
Q Consensus 32 ~~~vV~vs~GS~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~ 111 (232)
.+.+-.|.+|.++ ..+..-+...+++++..-.... .... ... ..........+|+.+
T Consensus 142 gkTvGIiG~G~IG-------~~va~~l~afgm~v~~~d~~~~-----------~~~~---~~~--~~~~~~~Ld~lL~~s 198 (324)
T COG0111 142 GKTVGIIGLGRIG-------RAVAKRLKAFGMKVIGYDPYSP-----------RERA---GVD--GVVGVDSLDELLAEA 198 (324)
T ss_pred CCEEEEECCCHHH-------HHHHHHHHhCCCeEEEECCCCc-----------hhhh---ccc--cceecccHHHHHhhC
Confidence 4567778888877 3455555566888775433111 1000 001 122344567888888
Q ss_pred CcceEEecCCchhHHHHHHhCCCeeeccccc--chhHHHHHHHh---hhhhcccccCCCcccCHHHHHHHHHH
Q 046553 112 AIGGFLTHCGWNSTLEGVSAGVPLVTRPLFA--EQFYNDKLAVQ---AAVTWGLEDKSGLVIKREKVKEAIEK 179 (232)
Q Consensus 112 ~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~--DQ~~nA~~v~~---G~g~~~~~~~~~~~~~~~~l~~~i~~ 179 (232)
++ ++.|. |... ....|++.+.. |+ +.++-.+ +..+..+.|.+++++
T Consensus 199 Di--v~lh~------------------PlT~eT~g~i~~~~~a~MK~ga-ilIN~aR-G~vVde~aL~~AL~~ 249 (324)
T COG0111 199 DI--LTLHL------------------PLTPETRGLINAEELAKMKPGA-ILINAAR-GGVVDEDALLAALDS 249 (324)
T ss_pred CE--EEEcC------------------CCCcchhcccCHHHHhhCCCCe-EEEECCC-cceecHHHHHHHHHc
Confidence 88 77775 4443 23556666666 44 4444333 334555556665554
No 305
>smart00046 DAGKc Diacylglycerol kinase catalytic domain (presumed). Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. DAG can be produced from the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) by a phosphoinositide-specific phospholipase C and by the degradation of phosphatidylcholine (PC) by a phospholipase C or the concerted actions of phospholipase D and phosphatidate phosphohydrolase. This domain is presumed to be the catalytic domain. Bacterial homologues areknown.
Probab=20.74 E-value=95 Score=22.84 Aligned_cols=28 Identities=21% Similarity=0.096 Sum_probs=21.5
Q ss_pred eEEecCCchhHHHHHHh----C-----CCeeeccccc
Q 046553 115 GFLTHCGWNSTLEGVSA----G-----VPLVTRPLFA 142 (232)
Q Consensus 115 ~~I~hgG~~sv~eal~~----G-----vP~i~~P~~~ 142 (232)
.+|.-||-||+.|++.. . .|+-++|..-
T Consensus 52 ~vvv~GGDGTi~~vvn~l~~~~~~~~~~plgiiP~GT 88 (124)
T smart00046 52 RVLVCGGDGTVGWVLNALDKRELPLPEPPVAVLPLGT 88 (124)
T ss_pred EEEEEccccHHHHHHHHHHhcccccCCCcEEEeCCCC
Confidence 48999999999998542 3 6788888743
No 306
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase. 2-oxoglutarate decarboxylase/SHCHC synthase (menD) is a thiamine pyrophosphate enzyme involved in menaquinone biosynthesis.
Probab=20.60 E-value=3.9e+02 Score=24.25 Aligned_cols=26 Identities=23% Similarity=0.351 Sum_probs=21.0
Q ss_pred cceEEecCCch------hHHHHHHhCCCeeec
Q 046553 113 IGGFLTHCGWN------STLEGVSAGVPLVTR 138 (232)
Q Consensus 113 ~~~~I~hgG~~------sv~eal~~GvP~i~~ 138 (232)
.+++++|.|-| .+++|.+.++|+|++
T Consensus 64 ~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i 95 (432)
T TIGR00173 64 PVAVVCTSGTAVANLLPAVIEASYSGVPLIVL 95 (432)
T ss_pred CEEEEECCcchHhhhhHHHHHhcccCCcEEEE
Confidence 33488887744 788999999999998
No 307
>PF15186 TEX13: Testis-expressed sequence 13 protein family
Probab=20.36 E-value=2.4e+02 Score=21.89 Aligned_cols=45 Identities=9% Similarity=0.276 Sum_probs=31.7
Q ss_pred hHHHHHHHh--hhhhcccccCCCcccCHHHHHHHHHHHHcCChhhHHHHHH
Q 046553 145 FYNDKLAVQ--AAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKR 193 (232)
Q Consensus 145 ~~nA~~v~~--G~g~~~~~~~~~~~~~~~~l~~~i~~vl~d~~~~~~~~~~ 193 (232)
|.|-+++.. |-..++..-. .+-+++.+.++.+|.|++--...|+.
T Consensus 17 FINee~~~n~~GpeFYl~~~S----~sW~eVEdkLraIl~d~~Vp~~~K~A 63 (152)
T PF15186_consen 17 FINEEMLRNGGGPEFYLENRS----LSWEEVEDKLRAILEDSQVPREAKRA 63 (152)
T ss_pred HHHHHHHhcCCCchHHHHhcc----CCHHHHHHHHHHHHhCccCCHHHHHH
Confidence 566666666 5556665543 78999999999999997544444444
No 308
>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=20.33 E-value=1e+02 Score=23.53 Aligned_cols=32 Identities=25% Similarity=0.621 Sum_probs=24.9
Q ss_pred hhhhcccCcceEEecCC-----chhHHHH---HHhCCCeeec
Q 046553 105 VLLLSHRAIGGFLTHCG-----WNSTLEG---VSAGVPLVTR 138 (232)
Q Consensus 105 ~~lL~~~~~~~~I~hgG-----~~sv~ea---l~~GvP~i~~ 138 (232)
..++..+++ +|-+-| ||+-+.| ++.|+|.|++
T Consensus 67 ~~li~~aDv--VVvrFGekYKQWNaAfDAg~a~AlgKplI~l 106 (141)
T PF11071_consen 67 RTLIEKADV--VVVRFGEKYKQWNAAFDAGYAAALGKPLITL 106 (141)
T ss_pred HHHHhhCCE--EEEEechHHHHHHHHhhHHHHHHcCCCeEEe
Confidence 456777888 888888 7777765 7789999987
No 309
>PRK05858 hypothetical protein; Provisional
Probab=20.33 E-value=3e+02 Score=25.83 Aligned_cols=25 Identities=16% Similarity=0.029 Sum_probs=20.4
Q ss_pred eEEecCCc------hhHHHHHHhCCCeeecc
Q 046553 115 GFLTHCGW------NSTLEGVSAGVPLVTRP 139 (232)
Q Consensus 115 ~~I~hgG~------~sv~eal~~GvP~i~~P 139 (232)
+++.|.|- +.+++|...++|+|++.
T Consensus 70 v~~~t~GpG~~n~~~~i~~A~~~~~Pvl~i~ 100 (542)
T PRK05858 70 VAVLTAGPGVTNGMSAMAAAQFNQSPLVVLG 100 (542)
T ss_pred EEEEcCCchHHHHHHHHHHHHhcCCCEEEEe
Confidence 37777774 48899999999999975
No 310
>PF03693 RHH_2: Uncharacterised protein family (UPF0156); InterPro: IPR022789 This family of proteins are about 80 amino acids in length and their function is unknown. The proteins contain a conserved GRY motif. This family appears to be related to ribbon-helix-helix DNA-binding proteins. ; PDB: 3KXE_C.
Probab=20.28 E-value=2.3e+02 Score=19.35 Aligned_cols=48 Identities=23% Similarity=0.346 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHh
Q 046553 170 REKVKEAIEKLMDRGKQGEKRRKRTRQLGEIANRATGVGASSHRNMEMLIEFVIQ 224 (232)
Q Consensus 170 ~~~l~~~i~~vl~d~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~l~~~i~~l~~ 224 (232)
.+-|+.+|+ +|. .-......|...+....+.|-+..-+++.+++....
T Consensus 30 SEvvR~aLR-lle------~~e~~~~~Lr~~l~~g~~sG~~~~~~~~~~~~~~~~ 77 (80)
T PF03693_consen 30 SEVVREALR-LLE------EREAKLEALREALQEGLESGESEPFDMDDILARARR 77 (80)
T ss_dssp HHHHHHHHH-HHH------HHHHHHHHHHHHHHHHHCT-EESS--HHHHHHHCCH
T ss_pred HHHHHHHHH-HHH------HHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHh
Confidence 334555565 444 222344567777777766665554667777765433
Done!