BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046555
(418 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZW88|FBL34_ARATH F-box/LRR-repeat protein At1g67190 OS=Arabidopsis thaliana
GN=At1g67190 PE=2 SV=1
Length = 419
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/419 (77%), Positives = 368/419 (87%), Gaps = 1/419 (0%)
Query: 1 MEQLPVEVIGNILSRLGGARDVVIASATCKKWQEAYRKHLHTLSFNSNDWSVYHDLTTTR 60
M+ LPVEVIGNILSRLGGARDVVIASATC+KW+EA RKHL TLSFNS DW Y DLTT R
Sbjct: 1 MDYLPVEVIGNILSRLGGARDVVIASATCRKWREACRKHLQTLSFNSADWPFYRDLTTNR 60
Query: 61 LEILITQTIFQTSGLQGLSILMDDVDEFSASTVIAWLMYTRETLRRLYYNVRTTPNVNIL 120
LEILITQTIFQT GLQGLSI+MDD ++FSA+TVIAWLMYTR+TLRRL YNVRTTPNVNIL
Sbjct: 61 LEILITQTIFQTMGLQGLSIMMDDANKFSAATVIAWLMYTRDTLRRLSYNVRTTPNVNIL 120
Query: 121 EICGRQKLEVLALAHNTITGVEPNFQRFPCLKSLSLSYVSISALDLSLLLTACQKIEILE 180
EICGRQKLE L LAHN+ITGVEP+FQRFPCLKSLSLSYVSISALDL+LLL+AC IE LE
Sbjct: 121 EICGRQKLEALVLAHNSITGVEPSFQRFPCLKSLSLSYVSISALDLNLLLSACPMIESLE 180
Query: 181 LVSPEIAMLDAQVTVELTSPTLKSIYVEAISLDKFILEADSIERLHLKDCALELFELVGR 240
LVS EIAM DAQVT+EL+SPTLKS+Y + ISLDKFILEADSIE LH+KDC LELFEL+G
Sbjct: 181 LVSLEIAMSDAQVTIELSSPTLKSVYFDGISLDKFILEADSIEFLHMKDCVLELFELIGN 240
Query: 241 GTLKHFKIDDVSVIHLDIGDTVDNLEIVDVSSFTIFWPKFYQMISRSSKLKKLRLWDV-V 299
GTLKHFK+DDVSVIHLDI +T ++LE+VDV+ FT+ WPKFYQMISRS KLKKLRLWDV
Sbjct: 241 GTLKHFKLDDVSVIHLDIMETSESLEVVDVNHFTMVWPKFYQMISRSQKLKKLRLWDVVF 300
Query: 300 FDEDEVLDLETIGVCFPQLSHLSLSYDLKDGVLHYGLQGSANLENVAVLELGWPVISDLF 359
D+DE++D+E+I F L+HLSLSYDLKDG HY LQG+ LENV VLELGW VI+D+F
Sbjct: 301 DDDDEIIDVESIAAGFSHLTHLSLSYDLKDGAAHYSLQGTTQLENVTVLELGWTVINDVF 360
Query: 360 SHWVEGLLKRCPNLRRLVIFGVISEIKTHEECLLLAKFTSSIVQLMRKYLHVEVQFDYE 418
S WVE LL+RCPNL++L+I+GV+SE KT +C +LA FT SIVQLMRKY+HVEVQF+YE
Sbjct: 361 SIWVEELLRRCPNLKKLIIYGVVSETKTQGDCQILATFTWSIVQLMRKYIHVEVQFEYE 419
>sp|Q9SAC4|FB2_ARATH F-box protein At1g10780 OS=Arabidopsis thaliana GN=At1g10780 PE=2
SV=1
Length = 418
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 16/193 (8%)
Query: 1 MEQLPVEVIGNILSRLGGARDVVIASATCKKWQEAYRKHLHTLSFNSNDWSVYHDLTTTR 60
M+ LP ++ ILS L ARDV + K+W+E+ + ++ F+ N + + T
Sbjct: 1 MDSLPDAILQYILSYLTSARDVAACNCVSKRWKEST-DSVKSVVFHRNSFESI--METDD 57
Query: 61 LEILITQTIFQTSGLQGLSILMDDVDEFSASTVIAWLMYTRETLRRLYYNVRTTPNVNIL 120
+ ++ + I + L+ L + F++S + +W+M+ +LR L + + ++
Sbjct: 58 SDSIVRKMISSSRRLEELVV----YSPFTSSGLASWMMHVSSSLRLLELRMDNLASEEVV 113
Query: 121 EICGRQKLEVLALAHN----TITGV----EPNFQRFPCLKSLSLSYVSISALDLSLLLTA 172
+ G KL+ + +A N + GV P + FP L+SL + + LS L A
Sbjct: 114 -VEGPLKLDCIGVAKNLEILKLWGVLMMSPPKWDMFPNLRSLEIVGAKMDDSSLSHALRA 172
Query: 173 CQKIEILELVSPE 185
C + L L++ E
Sbjct: 173 CPNLSNLLLLACE 185
>sp|Q6L438|R1A6_SOLDE Putative late blight resistance protein homolog R1A-6 OS=Solanum
demissum GN=R1A-6 PE=3 SV=2
Length = 1306
Score = 36.6 bits (83), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 127 KLEVLALAHNTITGVEPNFQRFPCLKSLSLSYVSISALDLSLLLTACQKIEILELVSPEI 186
+LE+L L + P P LK L LS + + LS + +E+L+L E
Sbjct: 1084 RLEILKLYRSNAFKAIPFCISAPNLKYLKLSGFYLDSQYLSKTADHLKNLEVLKLYYVEF 1143
Query: 187 AMLDAQVTVELTSPTLKSIYVEAISLDKFILEADS---IERLHLKDCALELFEL----VG 239
P LK + +E +SL K+I+ D+ +E+L L+ C +L E+ +
Sbjct: 1144 GDHREWKVSNGMFPQLKILKLEDVSLMKWIVADDAFPNLEQLVLRGCQ-DLMEIPSCFMD 1202
Query: 240 RGTLKHFKIDDV--SVIHLDIGDTVDNLEIVDVSSFTIF----WPKFYQMISRSS 288
+L++ +++D SV+ + +E ++F + WPKFY++ S+ S
Sbjct: 1203 ILSLQYIEVEDCNESVVKSAMNIQETQVEDYQNTNFKLVLIEKWPKFYKLFSQLS 1257
>sp|Q60CZ8|R1A10_SOLDE Putative late blight resistance protein homolog R1A-10 OS=Solanum
demissum GN=R1A-10 PE=3 SV=1
Length = 1306
Score = 36.6 bits (83), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 127 KLEVLALAHNTITGVEPNFQRFPCLKSLSLSYVSISALDLSLLLTACQKIEILELVSPEI 186
+LE+L L + P P LK L LS + + LS + +E+L+L E
Sbjct: 1084 RLEILKLYRSNAFKAIPFCISAPNLKYLKLSGFYLDSQYLSKTADHLKNLEVLKLYYVEF 1143
Query: 187 AMLDAQVTVELTSPTLKSIYVEAISLDKFILEADS---IERLHLKDCALELFEL----VG 239
P LK + +E +SL K+I+ D+ +E+L L+ C +L E+ +
Sbjct: 1144 GDHREWKVSNGMFPQLKILKLEDVSLMKWIVADDAFPNLEQLVLRGCQ-DLMEIPSCFMD 1202
Query: 240 RGTLKHFKIDDV--SVIHLDIGDTVDNLEIVDVSSFTIF----WPKFYQMISRSS 288
+L++ +++D SV+ + +E ++F + WPKFY++ S+ S
Sbjct: 1203 ILSLQYIEVEDCNESVVKSAMNIQETQVEDYQNTNFKLVLIEKWPKFYKLFSQLS 1257
>sp|Q08817|SOG2_YEAST Leucine-rich repeat-containing protein SOG2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SOG2 PE=1
SV=1
Length = 791
Score = 35.8 bits (81), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 11/118 (9%)
Query: 83 DDVDEFSASTVIAWLMYTRE------TLRRLYYNVRTTPNVNILEICGRQKLEVLALAHN 136
D S++T+I+ L + TL+ + N+++ + ++ I Q +E L+L N
Sbjct: 20 DKTSTNSSNTIISELATQEKSSSSGTTLKLIALNIKSISDEDVGYI---QNVERLSLRKN 76
Query: 137 TITGVEPNFQRFPCLKSLSLSYVSISALDLSLLLTACQKIEILELVSPEIAMLDAQVT 194
+T + +F+R L+ L L + ++ +LT C ++EIL+L S EI L +++
Sbjct: 77 HLTSLPASFKRLSRLQYLDLHNNNFK--EIPYILTQCPQLEILDLSSNEIEALPDEIS 132
>sp|Q3E944|FDL33_ARATH Putative F-box/FBD/LRR-repeat protein At5g25850 OS=Arabidopsis
thaliana GN=At5g25850 PE=4 SV=1
Length = 481
Score = 35.8 bits (81), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 26/191 (13%)
Query: 1 MEQLPVEVIGNILSRLGGARDVVIASATCKKWQEAYRKHLHTLSFNSND--WSVYHDLTT 58
+ QL +I ILS L ++VV S +W+ + LS S + +S++ + T
Sbjct: 22 LSQLSDPLICQILSHLP-IKEVVTTSVLSTRWKNIW------LSVPSLELIYSIFPNFNT 74
Query: 59 TRLEILITQTIFQTSGLQGLSILMDDVDEFSASTVIAWL-MYTRETLRRLYYNVRTTPNV 117
R F ++ + + L DE A + +W+ + +RRLY VR
Sbjct: 75 FRS---FGDRFFDSTRVSCIHNLKLYFDEHDACYLTSWINAFVTRNIRRLY--VRRVRGN 129
Query: 118 NILE------ICGRQKLEVLALAHNTITGVEPNFQRFPCLKSLSLSYVSI-SALDLSLLL 170
E +C + L L L H +T V+P F PCLK + L+YV + L+
Sbjct: 130 YFHELPLSLYVC--ETLVSLKLFH--LTLVDPEFVSLPCLKIMHLNYVWFPNDATFERLV 185
Query: 171 TACQKIEILEL 181
++C +E L++
Sbjct: 186 SSCPVLEDLKI 196
>sp|B4SAR7|DXR_PELPB 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pelodictyon
phaeoclathratiforme (strain DSM 5477 / BU-1) GN=dxr PE=3
SV=1
Length = 382
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 136 NTITGVEPNFQRFPCLKSLSLSYVSISA-LDLSLLLTACQKIEILELVSPEIAMLDAQVT 194
T+T EP+ +RFP L+ L++ ++ A L +L A +I + + +I D T
Sbjct: 291 GTLTFEEPDMERFPALR---LAFEALKAGLTYPAVLNAANEIAVAAFLDRKIGFTDIAAT 347
Query: 195 VELTSPTLKSIYVEAISLDKFILEADSIER 224
VE T ++ + I LD++ L+AD R
Sbjct: 348 VEKTMQAHEA--YDPIELDEY-LQADRWAR 374
>sp|Q66JT1|LRC8E_MOUSE Leucine-rich repeat-containing protein 8E OS=Mus musculus GN=Lrrc8e
PE=2 SV=2
Length = 795
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 128 LEVLALAHNTITGVEPNFQRFPCLKSLSLSYVSISALDLSLLLTACQKIEILEL------ 181
L +L L+HN + + P L+ L+LSY ++ +L L C K+ L L
Sbjct: 677 LRLLDLSHNGLRSLPPELGLLQSLQHLALSYNALESLPDELFF--CHKLRTLLLGYNHLT 734
Query: 182 -VSPEIAMLDAQVTVELTSPTLKSIYVE 208
+SP++A L A +EL L+++ E
Sbjct: 735 QLSPDVAALQALSRLELKGNRLETLPEE 762
>sp|Q6R5N8|TLR13_MOUSE Toll-like receptor 13 OS=Mus musculus GN=Tlr13 PE=1 SV=1
Length = 991
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 126 QKLEVLALAHNTITGVEPN-FQRFPCLKSLSLSYVSISALDLSLLLTACQKIEILELVSP 184
+KL+ L L+HN + +EPN F L+SL L Y S+S L + +K+ IL+L
Sbjct: 516 KKLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSYFH-EHLFSGLEKLLILKLGF- 573
Query: 185 EIAMLDAQVTVELTSPTLKSIYVEAISLDKFILEADSIERLHLKDCALELFELVGRGTLK 244
++T E T +++ SL + LE +R ++ F+ G G+L+
Sbjct: 574 ------NKITYETTRTLQYPPFIKLKSLKQLNLEG---QRHGIQVVPSNFFQ--GLGSLQ 622
Query: 245 HFKIDDVSVIHLDIG--DTVDNLEIVDVSS 272
+ + LD D + NL +D+S
Sbjct: 623 ELLLGKNPSVFLDHHQFDPLINLTKLDISG 652
>sp|B1H060|DXR_UNCTG 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Uncultured
termite group 1 bacterium phylotype Rs-D17 GN=dxr PE=3
SV=1
Length = 385
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 18/137 (13%)
Query: 87 EFSASTVIAWLMYTRETLRRLY---YNVRTTPNVNILEICGRQKLEVLALAHNTITGVEP 143
E+ +VIA L L Y Y R N+ L + KLE P
Sbjct: 250 EYVDGSVIAQLSNPDMKLPIQYALTYPERLPSNIKPLNLIEINKLEFY----------NP 299
Query: 144 NFQRFPCLKSLSLSYVSISALDLSLLLTACQKIEILELVSPEIAMLDAQVTVELTSPTLK 203
+F +FPCL SL+ Y + + ++ A ++ + ++ EI D V T T K
Sbjct: 300 DFNKFPCL-SLAY-YAAQKGYTVPAVMNAANEMAVASFLNKEIKFTDIAKIVGRTIKTHK 357
Query: 204 SIYVEAISLDKFILEAD 220
++ SLD FI EAD
Sbjct: 358 --ISKSTSLDTFI-EAD 371
>sp|Q8N9N7|LRC57_HUMAN Leucine-rich repeat-containing protein 57 OS=Homo sapiens GN=LRRC57
PE=1 SV=1
Length = 239
Score = 33.1 bits (74), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 121 EICGRQKLEVLALAHNTITGVEPNFQRFPCLKSLSLSYVSISAL 164
EIC +KLE L+L +N + + F + LK+LSLS + AL
Sbjct: 80 EICNLKKLETLSLNNNHLRELPSTFGQLSALKTLSLSGNQLGAL 123
>sp|Q9SH22|DRL20_ARATH Probable disease resistance protein At1g63360 OS=Arabidopsis
thaliana GN=At1g63360 PE=2 SV=1
Length = 884
Score = 32.7 bits (73), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 26/145 (17%)
Query: 238 VGRGTLKHFKIDDVSVIHLDIGDTVDNLEIVDVSSFTIFWPKFYQMISRSSKLKKLRLWD 297
V L+ F+I S+ + +G + L +VDV+ F + + + K++ L +W
Sbjct: 712 VSTDKLREFQIKSCSISEIKMGGICNFLSLVDVNIFNCEGLRELTFLIFAPKIRSLSVWH 771
Query: 298 V-----VFDEDEVLDLETIGVC-FPQLSHLSLSYDLKDGVLHYGLQGSANLENVAVLELG 351
+ +E++ + E G+ FP+L+ L+L +DL L+ + L
Sbjct: 772 AKDLEDIINEEKACEGEESGILPFPELNFLTL-HDL------------PKLKKIYWRPLP 818
Query: 352 WPVISDLFSHWVEGLLKRCPNLRRL 376
+ + ++ ++ CPNLR+L
Sbjct: 819 FLCLEEIN-------IRECPNLRKL 836
>sp|Q2GKQ8|DXR_ANAPZ 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anaplasma
phagocytophilum (strain HZ) GN=dxr PE=3 SV=1
Length = 385
Score = 32.3 bits (72), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 129 EVLALAHNTITGVEPNFQRFPCLKSLSLSYVSISALDL-SLLLTACQKIEILELVSPEIA 187
EV +A+ +T + P+F+RFP LK+ + + S D+ S++ A ++ + ++ EI
Sbjct: 282 EVDLIAYGKLTFIRPDFERFPALKA-AFDILQSSERDVASIVFNAANEVAVESFLNSEIT 340
Query: 188 MLD 190
L+
Sbjct: 341 FLE 343
>sp|P0C2G0|FBL27_ARATH F-box/LRR-repeat protein At1g06630 OS=Arabidopsis thaliana
GN=At1g06630 PE=2 SV=1
Length = 403
Score = 32.3 bits (72), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 124/332 (37%), Gaps = 44/332 (13%)
Query: 4 LPVEVIGNILSRLGGARDVVIASATCKKWQEAYRKHLHTLSFNSNDWSVYHDLTTTRLEI 63
LP E++G ILS L + V S KKW+ + K + TL F+ + + +
Sbjct: 17 LPDEILGKILSLLA-TKQAVSTSVLSKKWRTLF-KLVDTLEFDDSVSGMGEQEASYVFPE 74
Query: 64 LITQTIFQTSGLQ--------GLSILMDDVDEFSASTVIAWLMYTRETLRRLYYNVRTTP 115
+ +T LQ L + DE + V W+ + R V
Sbjct: 75 SFKDLVDRTVALQCDYPIRKLSLKCHVGRDDEQRKACVGRWI---SNVVGRGVSEVVLRI 131
Query: 116 NVNILEICGRQKLEV-----LALAHNTITGVEPNFQRFPCLKSLSLSYVSISAL-DLS-L 168
N L Q L L L G P++ P LK L + V +LS +
Sbjct: 132 NDRGLHFLSPQLLTCKTLVKLTLGTRLFLGKLPSYVSLPSLKFLFIHSVFFDDFGELSNV 191
Query: 169 LLTACQKIEILELVSPEIAMLDAQVTVELTSPTLK--SIYVEAISLDKFILEADSIERLH 226
LL C +E L L +M ++SPTLK S++ E + ++E L
Sbjct: 192 LLAGCPVVEALYLNQNGESM-----PYTISSPTLKRLSVHYEYHFESVISFDLPNLEYLD 246
Query: 227 LKDCALELFELVGRGTLKHFKIDDVSVIHLDIGDT------VDNLEIVDVSS-------- 272
D AL + V +L ++ H++ D + N+EI+ +S
Sbjct: 247 YSDYALYGYPQVNLESLVEAYLNLDKAEHVESPDVTKLIMGIRNVEILSLSPDSVGVIYS 306
Query: 273 ---FTIFWPKFYQMISRSSKLKKLRLWDVVFD 301
+ + P F ++S S KK R W ++ D
Sbjct: 307 CCKYGLLLPVFNNLVSLSFGTKKTRAWKLLAD 338
>sp|Q96DD0|LRC39_HUMAN Leucine-rich repeat-containing protein 39 OS=Homo sapiens GN=LRRC39
PE=2 SV=1
Length = 335
Score = 32.3 bits (72), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 117 VNILEICGR-QKLEVLALAHNTITGVEPNFQRFPCLKSLSLSYVSISALDLSLLLTACQK 175
+ I E GR Q L VL L+ NTI+ + P L+ L LSY I + L+ C
Sbjct: 96 LKIPEFIGRFQNLIVLDLSRNTISEIPPGIGLLTRLQELILSYNKIKTVPKE--LSNCAS 153
Query: 176 IEILELV 182
+E LEL
Sbjct: 154 LEKLELA 160
>sp|Q5FVI3|LRC57_RAT Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus
GN=Lrrc57 PE=2 SV=1
Length = 239
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 121 EICGRQKLEVLALAHNTITGVEPNFQRFPCLKSLSLSYVSISAL 164
E+C +KLE L+L +N + + +F + LK+LSLS + AL
Sbjct: 80 ELCNLKKLETLSLNNNHLRELPSSFGQLSALKTLSLSGNQLGAL 123
>sp|Q73GG3|DXR_WOLPM 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Wolbachia
pipientis wMel GN=dxr PE=3 SV=1
Length = 387
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 142 EPNFQRFPCLKSLSLSYVSISALDL-SLLLTACQKIEILELVSPEIAMLDAQVTVELTSP 200
EP+ +RFP LK LS++ ++ SA S++L A +I + E + I L VE T
Sbjct: 292 EPDHKRFPALK-LSMAVLNSSAPQTNSIVLNAANEIAVNEFLKSRIGFLKIVEVVESTME 350
Query: 201 TLKSIYVEAISLDKFI 216
+ S Y + SL I
Sbjct: 351 SFGS-YTDINSLSDII 365
>sp|Q6INV3|LRC57_XENLA Leucine-rich repeat-containing protein 57 OS=Xenopus laevis
GN=lrrc57 PE=2 SV=1
Length = 238
Score = 32.0 bits (71), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 81/197 (41%), Gaps = 44/197 (22%)
Query: 102 ETLRRLYYNVRTTPNVNILEICGRQKLEVLALAHNTITGVEPNFQRFPCLKSLSLSYVSI 161
E L+RL N+RT + L+ N I V P +F LKSLSL+ I
Sbjct: 31 EDLQRLSGNLRT-----------------IDLSSNKIEVVPPMMGKFSLLKSLSLNNNRI 73
Query: 162 SALDLSLLLTACQKIEILELVSPEIAMLDAQVTVELTSPTLKSIYVEAISLDKFILEADS 221
S L L +K+E L L +I+ L A +V+ ++L L +
Sbjct: 74 SRLPDE--LCKLKKLETLHLNGNQISQLPAD-------------FVQLLALKTLNLSGN- 117
Query: 222 IERLHLKDCALELFELVGRGTLKHFKIDDVSVIHLD-IGDTVDNLEIVDVSSFTIFWPKF 280
LK +LF+ L++ + D+S + I D V L+ ++++ +
Sbjct: 118 ----RLKTLPAQLFK------LRNLDVVDLSKNRIQAIPDEVSGLQAIELNLNQNQISQI 167
Query: 281 YQMISRSSKLKKLRLWD 297
IS +LK LRL +
Sbjct: 168 SVNISHCPRLKVLRLEE 184
>sp|Q8SU52|CCR4_ENCCU Probable glucose-repressible alcohol dehydrogenase transcriptional
effector homolog OS=Encephalitozoon cuniculi (strain
GB-M1) GN=CCR4 PE=3 SV=1
Length = 493
Score = 32.0 bits (71), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 121 EICGRQKLEVLALAHNTITGVEPNFQRFPCLKSLSLSYVSISALDLSLLLTACQKIEILE 180
EIC + LEVL L+ N I + P + L+ L+LS IS ++ + + +E+ E
Sbjct: 63 EICNLRHLEVLNLSKNKIRSIPPEIGKIVSLRELNLSDNLIS--NIPMEMGTLYNLEVFE 120
Query: 181 LVS 183
+ +
Sbjct: 121 IAN 123
>sp|Q9FM91|FBD23_ARATH Putative FBD-associated F-box protein At5g56400 OS=Arabidopsis
thaliana GN=At5g56400 PE=4 SV=2
Length = 455
Score = 32.0 bits (71), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 1 MEQLPVEVIGNILSRLGGARDVVIASATCKKWQEAYRKHLHTLSFN 46
+ LP +++ +ILS L D+V S K+W+ + K +H L FN
Sbjct: 35 ISDLPEDLLVHILSLLPTTNDIVATSGVSKRWESLWTK-VHKLRFN 79
>sp|Q9D1G5|LRC57_MOUSE Leucine-rich repeat-containing protein 57 OS=Mus musculus GN=Lrrc57
PE=2 SV=1
Length = 239
Score = 32.0 bits (71), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 121 EICGRQKLEVLALAHNTITGVEPNFQRFPCLKSLSLSYVSISAL 164
E+C +KLE L+L +N + + F + LK+LSLS + AL
Sbjct: 80 ELCNLKKLETLSLNNNHLRELPSTFGQLSALKTLSLSGNQLGAL 123
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,636,404
Number of Sequences: 539616
Number of extensions: 5660119
Number of successful extensions: 14482
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 14448
Number of HSP's gapped (non-prelim): 83
length of query: 418
length of database: 191,569,459
effective HSP length: 120
effective length of query: 298
effective length of database: 126,815,539
effective search space: 37791030622
effective search space used: 37791030622
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)