Query 046556
Match_columns 633
No_of_seqs 329 out of 3459
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 23:32:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046556.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046556hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h88_A Succinate dehydrogenase 100.0 1E-104 4E-109 888.2 60.2 591 40-633 11-621 (621)
2 2wdq_A Succinate dehydrogenase 100.0 5E-99 2E-103 842.6 55.7 583 45-633 5-588 (588)
3 2bs2_A Quinol-fumarate reducta 100.0 8E-99 3E-103 846.4 53.5 564 45-633 3-597 (660)
4 1kf6_A Fumarate reductase flav 100.0 3.2E-95 1.1E-99 813.3 58.1 560 45-633 3-581 (602)
5 3gyx_A Adenylylsulfate reducta 100.0 1E-88 3.5E-93 763.7 41.3 544 41-617 16-659 (662)
6 1chu_A Protein (L-aspartate ox 100.0 4.7E-88 1.6E-92 747.3 39.8 513 45-600 6-532 (540)
7 1jnr_A Adenylylsulfate reducta 100.0 5.9E-78 2E-82 680.0 45.9 538 40-618 15-639 (643)
8 2e5v_A L-aspartate oxidase; ar 100.0 1E-73 3.6E-78 623.7 39.8 468 49-602 1-470 (472)
9 1y0p_A Fumarate reductase flav 100.0 1.3E-52 4.4E-57 469.2 36.7 380 46-465 125-569 (571)
10 1qo8_A Flavocytochrome C3 fuma 100.0 4.3E-52 1.5E-56 464.2 37.5 380 45-465 119-564 (566)
11 1d4d_A Flavocytochrome C fumar 100.0 4.5E-52 1.6E-56 463.7 37.2 379 46-465 125-570 (572)
12 4at0_A 3-ketosteroid-delta4-5a 100.0 8E-50 2.7E-54 440.5 32.6 400 43-462 37-508 (510)
13 2i0z_A NAD(FAD)-utilizing dehy 100.0 2.6E-32 8.7E-37 295.9 26.7 357 46-466 25-445 (447)
14 2gqf_A Hypothetical protein HI 99.9 2.2E-23 7.5E-28 221.9 20.9 187 46-277 3-192 (401)
15 3v76_A Flavoprotein; structura 99.9 3.5E-22 1.2E-26 213.3 20.1 189 44-278 24-212 (417)
16 3cp8_A TRNA uridine 5-carboxym 99.7 1.4E-17 4.8E-22 183.6 12.0 155 44-248 18-175 (641)
17 4fk1_A Putative thioredoxin re 99.7 4.3E-16 1.5E-20 159.6 13.0 36 45-80 4-39 (304)
18 3nlc_A Uncharacterized protein 99.6 6.3E-14 2.2E-18 153.6 28.6 167 46-247 106-277 (549)
19 2zxi_A TRNA uridine 5-carboxym 99.6 1.1E-14 3.8E-19 160.1 21.1 154 46-249 26-182 (637)
20 3ces_A MNMG, tRNA uridine 5-ca 99.6 2.1E-14 7E-19 158.5 21.2 154 46-249 27-183 (651)
21 4gcm_A TRXR, thioredoxin reduc 99.6 5.3E-15 1.8E-19 151.9 15.6 36 45-80 4-39 (312)
22 4b1b_A TRXR, thioredoxin reduc 99.6 1.4E-15 4.7E-20 166.9 6.5 53 46-98 41-93 (542)
23 3dgz_A Thioredoxin reductase 2 99.5 2.2E-15 7.5E-20 164.8 5.4 155 46-247 5-159 (488)
24 3qfa_A Thioredoxin reductase 1 99.5 2.9E-15 9.8E-20 164.9 3.6 156 45-247 30-185 (519)
25 4a5l_A Thioredoxin reductase; 99.5 3.9E-13 1.3E-17 137.8 17.8 35 46-80 3-37 (314)
26 3f8d_A Thioredoxin reductase ( 99.5 4.7E-14 1.6E-18 145.0 10.3 112 47-248 15-126 (323)
27 3lzw_A Ferredoxin--NADP reduct 99.5 5.3E-14 1.8E-18 145.3 10.4 117 46-246 6-122 (332)
28 3dgh_A TRXR-1, thioredoxin red 99.5 1.3E-14 4.6E-19 158.3 5.3 155 45-247 7-162 (483)
29 3oz2_A Digeranylgeranylglycero 99.5 1.1E-12 3.8E-17 138.6 18.7 61 184-247 102-162 (397)
30 3dme_A Conserved exported prot 99.4 4.4E-13 1.5E-17 140.4 11.5 184 46-247 3-209 (369)
31 2zbw_A Thioredoxin reductase; 99.4 5.2E-13 1.8E-17 138.3 11.9 118 46-247 4-121 (335)
32 3lad_A Dihydrolipoamide dehydr 99.4 1.3E-13 4.6E-18 150.1 6.9 37 46-82 2-38 (476)
33 3da1_A Glycerol-3-phosphate de 99.4 8.4E-13 2.9E-17 146.3 13.1 64 183-247 169-232 (561)
34 1y56_B Sarcosine oxidase; dehy 99.4 3.9E-13 1.3E-17 141.9 10.0 185 45-247 3-205 (382)
35 3ab1_A Ferredoxin--NADP reduct 99.4 6E-13 2.1E-17 139.4 11.1 120 45-247 12-131 (360)
36 3urh_A Dihydrolipoyl dehydroge 99.4 5.3E-13 1.8E-17 146.0 11.1 37 45-81 23-59 (491)
37 4a9w_A Monooxygenase; baeyer-v 99.4 1.5E-12 5.1E-17 135.6 13.9 58 184-248 76-133 (357)
38 1rp0_A ARA6, thiazole biosynth 99.4 1.8E-12 6.1E-17 131.2 13.7 143 46-247 38-191 (284)
39 3jsk_A Cypbp37 protein; octame 99.4 3.2E-12 1.1E-16 130.9 14.7 145 46-248 78-252 (344)
40 3dje_A Fructosyl amine: oxygen 99.4 1.7E-12 5.8E-17 139.8 13.4 63 183-251 160-225 (438)
41 3o0h_A Glutathione reductase; 99.4 9.7E-13 3.3E-17 143.6 11.4 34 46-79 25-58 (484)
42 3dk9_A Grase, GR, glutathione 99.4 4.1E-14 1.4E-18 154.3 0.2 36 45-80 18-53 (478)
43 1ojt_A Surface protein; redox- 99.4 1.6E-12 5.3E-17 141.8 12.7 37 45-81 4-40 (482)
44 2gag_B Heterotetrameric sarcos 99.4 8.7E-12 3E-16 132.5 16.9 189 45-247 19-230 (405)
45 2rgh_A Alpha-glycerophosphate 99.3 4.9E-12 1.7E-16 140.5 14.7 65 183-248 187-251 (571)
46 3itj_A Thioredoxin reductase 1 99.3 1.8E-11 6E-16 126.6 17.4 125 43-247 18-142 (338)
47 3l8k_A Dihydrolipoyl dehydroge 99.3 4.9E-13 1.7E-17 145.2 5.7 36 46-81 3-38 (466)
48 2a8x_A Dihydrolipoyl dehydroge 99.3 7.4E-13 2.5E-17 143.7 7.0 33 47-79 3-35 (464)
49 4dna_A Probable glutathione re 99.3 1.2E-13 4E-18 150.0 0.6 34 46-79 4-37 (463)
50 2hqm_A GR, grase, glutathione 99.3 1.7E-13 6E-18 149.2 1.6 35 46-80 10-44 (479)
51 3ps9_A TRNA 5-methylaminomethy 99.3 2.3E-11 8E-16 138.1 19.0 182 46-251 271-477 (676)
52 1ryi_A Glycine oxidase; flavop 99.3 3.2E-12 1.1E-16 134.8 11.1 57 183-247 163-219 (382)
53 3pvc_A TRNA 5-methylaminomethy 99.3 3.4E-11 1.2E-15 137.0 19.2 63 183-251 411-473 (689)
54 3atr_A Conserved archaeal prot 99.3 1.4E-11 4.7E-16 133.3 13.9 65 184-249 100-164 (453)
55 2gjc_A Thiazole biosynthetic e 99.3 1.9E-11 6.6E-16 124.4 13.6 144 46-247 64-239 (326)
56 2qcu_A Aerobic glycerol-3-phos 99.3 4E-11 1.4E-15 131.3 16.8 64 183-248 148-211 (501)
57 2qae_A Lipoamide, dihydrolipoy 99.3 3.6E-12 1.2E-16 138.5 8.3 35 47-81 2-36 (468)
58 1dxl_A Dihydrolipoamide dehydr 99.3 3.6E-12 1.2E-16 138.5 8.1 37 46-82 5-41 (470)
59 3ic9_A Dihydrolipoamide dehydr 99.3 1.3E-13 4.4E-18 150.7 -3.3 36 45-80 6-41 (492)
60 3cty_A Thioredoxin reductase; 99.3 2.9E-10 1E-14 116.7 21.8 36 44-79 13-48 (319)
61 3r9u_A Thioredoxin reductase; 99.3 6.2E-12 2.1E-16 128.6 9.1 33 47-79 4-37 (315)
62 4eqs_A Coenzyme A disulfide re 99.3 9.2E-12 3.1E-16 133.9 10.8 50 195-248 68-117 (437)
63 3cgv_A Geranylgeranyl reductas 99.3 2.1E-11 7.1E-16 129.1 13.4 61 184-247 102-162 (397)
64 1ebd_A E3BD, dihydrolipoamide 99.3 5.9E-12 2E-16 136.3 9.0 33 47-79 3-35 (455)
65 2wpf_A Trypanothione reductase 99.3 5.8E-12 2E-16 137.6 8.9 33 46-78 6-39 (495)
66 1v59_A Dihydrolipoamide dehydr 99.3 2.4E-12 8.1E-17 140.3 5.8 36 46-81 4-39 (478)
67 3e1t_A Halogenase; flavoprotei 99.3 3.3E-11 1.1E-15 132.4 14.8 64 184-249 111-174 (512)
68 3fpz_A Thiazole biosynthetic e 99.3 1.6E-11 5.6E-16 126.7 11.3 45 419-465 281-325 (326)
69 1fec_A Trypanothione reductase 99.3 8.2E-12 2.8E-16 136.3 9.5 33 46-78 2-35 (490)
70 3axb_A Putative oxidoreductase 99.3 3E-11 1E-15 130.4 13.6 60 183-248 180-255 (448)
71 3nyc_A D-arginine dehydrogenas 99.2 5E-12 1.7E-16 133.1 6.9 181 45-247 7-209 (381)
72 3qvp_A Glucose oxidase; oxidor 99.2 1E-10 3.5E-15 129.2 16.7 52 195-247 238-293 (583)
73 2gmh_A Electron transfer flavo 99.2 2.7E-11 9.2E-16 134.9 11.8 65 184-248 144-218 (584)
74 2oln_A NIKD protein; flavoprot 99.2 2.1E-10 7E-15 121.7 18.2 56 184-247 153-208 (397)
75 2r9z_A Glutathione amide reduc 99.2 4.3E-11 1.5E-15 129.7 12.9 34 46-79 3-36 (463)
76 3fbs_A Oxidoreductase; structu 99.2 1.1E-11 3.9E-16 125.5 7.8 33 48-80 3-35 (297)
77 2eq6_A Pyruvate dehydrogenase 99.2 2.5E-11 8.5E-16 131.6 9.5 34 47-80 6-39 (464)
78 2ywl_A Thioredoxin reductase r 99.2 6.3E-10 2.2E-14 104.1 17.8 55 183-246 55-109 (180)
79 1onf_A GR, grase, glutathione 99.2 2.1E-12 7.3E-17 141.4 0.7 34 47-80 2-35 (500)
80 1xdi_A RV3303C-LPDA; reductase 99.2 9.2E-12 3.2E-16 136.3 5.1 34 47-80 2-38 (499)
81 3ics_A Coenzyme A-disulfide re 99.2 8.9E-11 3.1E-15 131.2 13.2 51 193-247 102-152 (588)
82 3i3l_A Alkylhalidase CMLS; fla 99.2 1.9E-10 6.4E-15 127.8 15.0 61 184-247 128-188 (591)
83 1pj5_A N,N-dimethylglycine oxi 99.2 3.7E-11 1.3E-15 139.6 9.7 182 46-248 3-208 (830)
84 1zmd_A Dihydrolipoyl dehydroge 99.2 2.2E-11 7.7E-16 132.4 7.0 36 46-81 5-40 (474)
85 3q9t_A Choline dehydrogenase a 99.2 4.7E-11 1.6E-15 132.0 9.6 52 195-247 217-270 (577)
86 2uzz_A N-methyl-L-tryptophan o 99.2 2E-10 6.8E-15 120.5 14.0 60 183-250 148-207 (372)
87 1ges_A Glutathione reductase; 99.2 5.2E-11 1.8E-15 128.6 9.5 34 46-79 3-36 (450)
88 3kd9_A Coenzyme A disulfide re 99.2 1.1E-10 3.8E-15 125.9 12.0 34 47-80 3-38 (449)
89 3klj_A NAD(FAD)-dependent dehy 99.2 8E-11 2.7E-15 124.2 10.6 35 46-80 8-42 (385)
90 3nix_A Flavoprotein/dehydrogen 99.2 2E-10 6.9E-15 122.7 13.8 61 184-247 106-166 (421)
91 1mo9_A ORF3; nucleotide bindin 99.1 1.2E-10 4.1E-15 128.1 11.8 36 45-80 41-76 (523)
92 2gf3_A MSOX, monomeric sarcosi 99.1 2.8E-10 9.7E-15 120.1 14.1 184 47-248 3-206 (389)
93 3ihg_A RDME; flavoenzyme, anth 99.1 2.5E-10 8.7E-15 126.0 13.9 63 183-247 119-183 (535)
94 1zk7_A HGII, reductase, mercur 99.1 2.1E-10 7.2E-15 124.4 11.6 34 46-79 3-36 (467)
95 2qa1_A PGAE, polyketide oxygen 99.1 9.1E-10 3.1E-14 120.3 16.6 157 44-247 8-165 (500)
96 3fmw_A Oxygenase; mithramycin, 99.1 3.2E-10 1.1E-14 125.7 13.0 60 184-247 148-207 (570)
97 3c4n_A Uncharacterized protein 99.1 6.1E-11 2.1E-15 126.2 6.8 57 183-247 171-236 (405)
98 2qa2_A CABE, polyketide oxygen 99.1 1.4E-09 4.7E-14 118.8 16.2 156 45-247 10-166 (499)
99 3lxd_A FAD-dependent pyridine 99.1 6.6E-10 2.3E-14 118.6 12.9 35 46-80 8-44 (415)
100 3oc4_A Oxidoreductase, pyridin 99.1 5.1E-11 1.8E-15 128.7 4.1 34 48-81 3-38 (452)
101 3iwa_A FAD-dependent pyridine 99.1 1.5E-09 5.1E-14 117.9 15.6 33 48-80 4-38 (472)
102 2cdu_A NADPH oxidase; flavoenz 99.1 7.9E-10 2.7E-14 119.4 13.2 33 48-80 1-35 (452)
103 2cul_A Glucose-inhibited divis 99.1 1.5E-09 5.2E-14 106.0 13.9 58 184-248 68-126 (232)
104 3ntd_A FAD-dependent pyridine 99.0 1.2E-10 4E-15 129.6 5.1 49 195-247 69-117 (565)
105 3cgb_A Pyridine nucleotide-dis 99.0 2.1E-10 7.1E-15 124.9 6.6 34 48-81 37-72 (480)
106 2bry_A NEDD9 interacting prote 99.0 6.3E-10 2.2E-14 121.4 10.2 142 45-249 90-232 (497)
107 2bc0_A NADH oxidase; flavoprot 99.0 4.2E-10 1.4E-14 122.8 8.5 34 47-80 35-71 (490)
108 2x3n_A Probable FAD-dependent 99.0 1.8E-09 6.2E-14 114.5 12.6 59 184-248 107-167 (399)
109 3fim_B ARYL-alcohol oxidase; A 99.0 8E-10 2.7E-14 121.8 9.7 52 195-247 219-276 (566)
110 1xhc_A NADH oxidase /nitrite r 99.0 3.4E-10 1.2E-14 118.7 6.3 33 47-80 8-40 (367)
111 1k0i_A P-hydroxybenzoate hydro 99.0 1.4E-09 4.8E-14 115.1 11.1 63 184-249 103-165 (394)
112 1nhp_A NADH peroxidase; oxidor 99.0 2.6E-10 9E-15 122.9 5.0 32 49-80 2-35 (447)
113 2v3a_A Rubredoxin reductase; a 99.0 2.7E-09 9.1E-14 112.6 12.4 33 47-79 4-38 (384)
114 1c0p_A D-amino acid oxidase; a 99.0 1.8E-09 6.1E-14 113.0 11.0 40 45-84 4-43 (363)
115 2r0c_A REBC; flavin adenine di 99.0 8E-09 2.7E-13 114.2 16.4 59 184-247 138-196 (549)
116 2yqu_A 2-oxoglutarate dehydrog 99.0 2.7E-10 9.2E-15 123.1 4.5 35 47-81 1-35 (455)
117 3ka7_A Oxidoreductase; structu 98.9 1.5E-08 5.1E-13 108.2 17.1 57 184-247 196-252 (425)
118 3ef6_A Toluene 1,2-dioxygenase 98.9 3.4E-09 1.2E-13 112.8 10.9 33 48-80 3-37 (410)
119 1ju2_A HydroxynitrIle lyase; f 98.9 2.3E-09 7.7E-14 118.1 9.7 55 192-247 202-261 (536)
120 3t37_A Probable dehydrogenase; 98.9 5.5E-09 1.9E-13 115.0 12.8 49 196-247 223-271 (526)
121 3rp8_A Flavoprotein monooxygen 98.9 6.9E-09 2.4E-13 110.3 12.8 56 184-248 127-182 (407)
122 2weu_A Tryptophan 5-halogenase 98.9 9.9E-09 3.4E-13 112.5 14.4 60 184-249 173-232 (511)
123 3c96_A Flavin-containing monoo 98.9 1.5E-08 5.1E-13 107.8 15.2 62 184-248 107-170 (410)
124 4dgk_A Phytoene dehydrogenase; 98.9 1.6E-08 5.3E-13 110.6 15.6 58 184-247 221-278 (501)
125 1gpe_A Protein (glucose oxidas 98.9 4E-08 1.4E-12 109.2 18.8 54 194-248 241-298 (587)
126 2aqj_A Tryptophan halogenase, 98.9 1.3E-08 4.6E-13 112.2 14.8 60 184-249 165-224 (538)
127 3fg2_P Putative rubredoxin red 98.9 1.1E-08 3.7E-13 108.7 13.0 33 48-80 2-36 (404)
128 2e4g_A Tryptophan halogenase; 98.9 2.5E-08 8.6E-13 110.2 16.0 60 184-249 194-254 (550)
129 2dkh_A 3-hydroxybenzoate hydro 98.8 1.2E-08 4E-13 114.9 12.9 65 184-248 141-212 (639)
130 3g3e_A D-amino-acid oxidase; F 98.8 7.5E-10 2.6E-14 115.3 2.6 46 49-94 2-53 (351)
131 2gqw_A Ferredoxin reductase; f 98.8 3.3E-08 1.1E-12 105.1 14.5 35 46-80 6-42 (408)
132 2jbv_A Choline oxidase; alcoho 98.8 4.4E-08 1.5E-12 108.0 15.9 51 196-247 221-273 (546)
133 3p1w_A Rabgdi protein; GDI RAB 98.8 1.8E-08 6.1E-13 108.1 12.1 58 184-246 256-313 (475)
134 2pyx_A Tryptophan halogenase; 98.8 6.3E-08 2.2E-12 106.5 16.8 60 184-249 175-235 (526)
135 2vou_A 2,6-dihydroxypyridine h 98.8 3.5E-08 1.2E-12 104.5 14.2 36 46-81 4-39 (397)
136 3alj_A 2-methyl-3-hydroxypyrid 98.8 2.1E-08 7.1E-13 105.5 12.3 54 184-247 107-160 (379)
137 2gv8_A Monooxygenase; FMO, FAD 98.8 4.3E-08 1.5E-12 105.5 14.3 63 184-248 115-178 (447)
138 3pl8_A Pyranose 2-oxidase; sub 98.8 2E-08 6.8E-13 112.3 11.4 51 197-247 273-324 (623)
139 3s5w_A L-ornithine 5-monooxyge 98.8 3.8E-08 1.3E-12 106.4 13.2 63 184-247 127-192 (463)
140 1n4w_A CHOD, cholesterol oxida 98.8 6.5E-08 2.2E-12 105.7 14.8 56 191-247 228-288 (504)
141 4ap3_A Steroid monooxygenase; 98.7 3.6E-08 1.2E-12 108.7 12.2 138 45-247 19-159 (549)
142 1kdg_A CDH, cellobiose dehydro 98.7 1.6E-08 5.4E-13 111.8 9.5 57 190-247 201-261 (546)
143 3nrn_A Uncharacterized protein 98.7 3.6E-07 1.2E-11 97.4 19.1 55 184-247 189-243 (421)
144 2q7v_A Thioredoxin reductase; 98.7 7E-08 2.4E-12 99.0 12.9 34 46-79 7-40 (325)
145 2xve_A Flavin-containing monoo 98.7 1.4E-07 4.9E-12 101.9 15.7 66 183-248 100-167 (464)
146 3qj4_A Renalase; FAD/NAD(P)-bi 98.7 6E-08 2E-12 100.4 12.3 37 48-84 2-41 (342)
147 2xdo_A TETX2 protein; tetracyc 98.7 1E-07 3.4E-12 101.0 14.2 36 46-81 25-60 (398)
148 1yvv_A Amine oxidase, flavin-c 98.7 5E-08 1.7E-12 100.5 11.6 38 47-84 2-39 (336)
149 1w4x_A Phenylacetone monooxyge 98.7 6.9E-08 2.3E-12 106.5 13.3 40 45-84 14-53 (542)
150 3gwf_A Cyclohexanone monooxyge 98.7 5.7E-08 1.9E-12 106.9 11.9 137 46-248 7-148 (540)
151 1fl2_A Alkyl hydroperoxide red 98.7 6.7E-07 2.3E-11 90.9 18.7 47 197-244 193-239 (310)
152 2q0l_A TRXR, thioredoxin reduc 98.7 1.4E-07 4.7E-12 96.1 12.8 32 48-79 2-34 (311)
153 1pn0_A Phenol 2-monooxygenase; 98.6 1.9E-07 6.4E-12 105.4 14.3 35 46-80 7-46 (665)
154 1coy_A Cholesterol oxidase; ox 98.6 2.5E-07 8.7E-12 101.0 14.8 56 191-247 233-293 (507)
155 3d1c_A Flavin-containing putat 98.6 1.6E-07 5.4E-12 98.0 12.5 58 183-248 87-144 (369)
156 1fl2_A Alkyl hydroperoxide red 98.6 1.4E-07 4.9E-12 95.9 11.3 59 184-247 56-115 (310)
157 2q0l_A TRXR, thioredoxin reduc 98.6 1.2E-06 4.2E-11 88.9 18.2 48 196-244 191-238 (311)
158 3uox_A Otemo; baeyer-villiger 98.6 1.7E-07 5.9E-12 103.1 11.8 139 46-248 8-148 (545)
159 1hyu_A AHPF, alkyl hydroperoxi 98.6 1.2E-06 4.1E-11 96.0 17.9 47 197-244 404-450 (521)
160 1hyu_A AHPF, alkyl hydroperoxi 98.5 2.7E-07 9.4E-12 101.1 12.1 59 184-247 267-326 (521)
161 2x8g_A Thioredoxin glutathione 98.5 6.1E-07 2.1E-11 100.2 15.0 35 45-79 105-139 (598)
162 1y56_A Hypothetical protein PH 98.5 1.1E-07 3.8E-12 103.6 8.4 39 43-82 104-142 (493)
163 1trb_A Thioredoxin reductase; 98.5 4.3E-07 1.5E-11 92.7 12.0 34 46-79 4-37 (320)
164 1vdc_A NTR, NADPH dependent th 98.5 2.4E-07 8.3E-12 95.2 9.6 33 46-78 7-39 (333)
165 2a87_A TRXR, TR, thioredoxin r 98.5 4.1E-07 1.4E-11 93.8 11.2 35 45-79 12-46 (335)
166 3k7m_X 6-hydroxy-L-nicotine ox 98.5 3.8E-07 1.3E-11 97.5 10.9 39 48-86 2-40 (431)
167 4g6h_A Rotenone-insensitive NA 98.5 4.4E-07 1.5E-11 98.9 11.1 33 47-79 42-74 (502)
168 3kkj_A Amine oxidase, flavin-c 98.4 1.2E-07 4.1E-12 93.6 5.2 38 47-84 2-39 (336)
169 3nks_A Protoporphyrinogen oxid 98.4 1.1E-06 3.6E-11 95.3 13.0 57 184-247 234-290 (477)
170 1s3e_A Amine oxidase [flavin-c 98.4 4.7E-07 1.6E-11 99.4 10.0 41 46-86 3-43 (520)
171 1lvl_A Dihydrolipoamide dehydr 98.4 7.6E-07 2.6E-11 96.0 10.8 34 46-79 4-37 (458)
172 2ivd_A PPO, PPOX, protoporphyr 98.4 6.2E-07 2.1E-11 97.2 10.0 40 46-85 15-54 (478)
173 3vrd_B FCCB subunit, flavocyto 98.4 6.5E-05 2.2E-09 79.2 25.0 32 49-80 4-37 (401)
174 3i6d_A Protoporphyrinogen oxid 98.4 3.7E-07 1.3E-11 98.6 7.4 39 47-85 5-49 (470)
175 4hb9_A Similarities with proba 98.3 1.5E-06 5.1E-11 91.9 10.0 33 49-81 3-35 (412)
176 2x8g_A Thioredoxin glutathione 98.3 4.2E-05 1.4E-09 85.2 22.0 31 49-79 288-318 (598)
177 2vdc_G Glutamate synthase [NAD 98.3 2.6E-06 9.1E-11 91.5 11.2 49 399-466 396-445 (456)
178 1gte_A Dihydropyrimidine dehyd 98.3 8.6E-06 2.9E-10 96.3 16.5 31 49-79 334-365 (1025)
179 2gag_A Heterotetrameric sarcos 98.3 2.7E-06 9.4E-11 99.9 12.1 38 45-82 126-163 (965)
180 4b63_A L-ornithine N5 monooxyg 98.3 1.9E-05 6.5E-10 86.0 17.8 65 183-247 144-214 (501)
181 4gut_A Lysine-specific histone 98.2 1.8E-05 6.3E-10 90.2 16.3 40 45-84 334-373 (776)
182 1cjc_A Protein (adrenodoxin re 98.2 2.2E-05 7.7E-10 84.4 15.8 50 399-466 346-396 (460)
183 3k30_A Histamine dehydrogenase 98.2 1.3E-05 4.6E-10 90.8 14.5 40 45-84 389-428 (690)
184 3h8l_A NADH oxidase; membrane 98.1 2.4E-06 8.2E-11 90.6 6.1 32 49-80 3-37 (409)
185 4gde_A UDP-galactopyranose mut 98.1 1.7E-06 5.7E-11 94.6 4.7 41 46-86 9-50 (513)
186 1q1r_A Putidaredoxin reductase 98.1 3.6E-06 1.2E-10 90.0 7.0 34 47-80 4-39 (431)
187 2bcg_G Secretory pathway GDP d 98.0 3.1E-06 1E-10 91.1 5.7 57 184-247 242-300 (453)
188 1trb_A Thioredoxin reductase; 97.9 5.8E-05 2E-09 76.7 12.5 55 190-245 190-245 (320)
189 3lxd_A FAD-dependent pyridine 97.9 9.6E-05 3.3E-09 78.4 13.4 96 48-244 153-248 (415)
190 1v59_A Dihydrolipoamide dehydr 97.9 0.00014 4.9E-09 78.5 14.9 59 188-246 228-286 (478)
191 3fg2_P Putative rubredoxin red 97.8 9.1E-05 3.1E-09 78.2 12.6 54 186-245 186-239 (404)
192 3hdq_A UDP-galactopyranose mut 97.8 1.1E-05 3.8E-10 84.6 5.3 43 44-86 26-68 (397)
193 1v0j_A UDP-galactopyranose mut 97.8 1.1E-05 3.6E-10 85.3 4.9 41 46-86 6-47 (399)
194 3cty_A Thioredoxin reductase; 97.8 0.00012 4.1E-09 74.4 11.9 50 194-244 200-249 (319)
195 3sx6_A Sulfide-quinone reducta 97.8 2.4E-05 8.2E-10 83.6 6.9 33 48-80 5-40 (437)
196 2yg5_A Putrescine oxidase; oxi 97.8 1.4E-05 4.8E-10 85.8 5.0 41 46-86 4-44 (453)
197 2jae_A L-amino acid oxidase; o 97.7 1.9E-05 6.4E-10 85.7 5.5 41 46-86 10-50 (489)
198 3itj_A Thioredoxin reductase 1 97.7 0.0002 7E-09 73.0 13.0 48 197-245 222-269 (338)
199 2eq6_A Pyruvate dehydrogenase 97.7 0.00022 7.6E-09 76.7 13.7 32 48-79 170-201 (464)
200 1mo9_A ORF3; nucleotide bindin 97.7 0.00021 7.2E-09 78.1 13.7 58 187-246 258-315 (523)
201 2b9w_A Putative aminooxidase; 97.7 2.4E-05 8.3E-10 83.1 5.8 41 46-86 5-46 (424)
202 1rsg_A FMS1 protein; FAD bindi 97.7 2E-05 6.7E-10 86.3 4.7 40 46-85 7-47 (516)
203 2e1m_A L-glutamate oxidase; L- 97.7 2.7E-05 9.3E-10 81.0 5.5 40 45-84 42-82 (376)
204 1sez_A Protoporphyrinogen oxid 97.7 2.2E-05 7.7E-10 85.5 5.1 41 45-85 11-51 (504)
205 1nhp_A NADH peroxidase; oxidor 97.7 0.00015 5.1E-09 77.7 11.3 33 47-79 149-181 (447)
206 1i8t_A UDP-galactopyranose mut 97.7 2.3E-05 7.7E-10 81.8 4.6 39 48-86 2-40 (367)
207 3h28_A Sulfide-quinone reducta 97.7 9.9E-06 3.4E-10 86.5 1.7 33 48-80 3-37 (430)
208 3ihm_A Styrene monooxygenase A 97.7 2.5E-05 8.6E-10 83.3 4.6 34 47-80 22-55 (430)
209 4dsg_A UDP-galactopyranose mut 97.6 6.7E-05 2.3E-09 81.3 7.8 43 45-87 7-50 (484)
210 1zmd_A Dihydrolipoyl dehydroge 97.6 0.00038 1.3E-08 75.1 13.6 32 48-79 179-210 (474)
211 2hqm_A GR, grase, glutathione 97.6 0.00023 8E-09 76.9 11.9 53 189-245 231-283 (479)
212 1d5t_A Guanine nucleotide diss 97.6 4.3E-05 1.5E-09 81.6 5.8 57 184-247 234-290 (433)
213 1ebd_A E3BD, dihydrolipoamide 97.6 0.00054 1.8E-08 73.5 14.5 32 48-79 171-202 (455)
214 1q1r_A Putidaredoxin reductase 97.6 0.00029 1E-08 75.0 12.2 53 188-245 195-248 (431)
215 1ges_A Glutathione reductase; 97.6 0.00024 8.4E-09 76.1 11.5 32 48-79 168-199 (450)
216 3dgz_A Thioredoxin reductase 2 97.6 0.00066 2.2E-08 73.5 15.0 56 188-244 229-284 (488)
217 2vvm_A Monoamine oxidase N; FA 97.6 4.1E-05 1.4E-09 83.2 5.4 57 184-247 255-312 (495)
218 3ab1_A Ferredoxin--NADP reduct 97.6 0.00028 9.5E-09 73.0 11.6 51 192-244 210-260 (360)
219 2v3a_A Rubredoxin reductase; a 97.6 0.00042 1.4E-08 72.5 12.9 32 48-79 146-177 (384)
220 3urh_A Dihydrolipoyl dehydroge 97.6 0.0004 1.4E-08 75.3 13.0 56 187-244 242-297 (491)
221 2zbw_A Thioredoxin reductase; 97.6 0.00064 2.2E-08 69.4 13.7 53 190-244 197-249 (335)
222 2yqu_A 2-oxoglutarate dehydrog 97.6 0.00032 1.1E-08 75.3 11.7 32 48-79 168-199 (455)
223 3dgh_A TRXR-1, thioredoxin red 97.6 0.00064 2.2E-08 73.5 14.1 56 188-244 231-286 (483)
224 2cdu_A NADPH oxidase; flavoenz 97.5 0.00041 1.4E-08 74.3 11.7 53 187-246 194-246 (452)
225 2r9z_A Glutathione amide reduc 97.5 0.00048 1.6E-08 74.1 12.2 31 49-79 168-198 (463)
226 3lov_A Protoporphyrinogen oxid 97.5 5.4E-05 1.9E-09 81.7 4.4 38 47-84 4-43 (475)
227 3cgb_A Pyridine nucleotide-dis 97.5 0.00049 1.7E-08 74.3 12.0 33 47-79 186-218 (480)
228 2q7v_A Thioredoxin reductase; 97.5 0.00077 2.6E-08 68.5 12.7 47 196-244 200-246 (325)
229 1dxl_A Dihydrolipoamide dehydr 97.5 0.00043 1.5E-08 74.5 11.3 32 48-79 178-209 (470)
230 3dk9_A Grase, GR, glutathione 97.5 0.00079 2.7E-08 72.6 13.4 32 48-79 188-219 (478)
231 3g5s_A Methylenetetrahydrofola 97.5 9.2E-05 3.2E-09 76.2 5.4 33 48-80 2-34 (443)
232 3ef6_A Toluene 1,2-dioxygenase 97.5 0.00029 9.8E-09 74.5 9.4 52 187-245 188-239 (410)
233 2bi7_A UDP-galactopyranose mut 97.4 8.9E-05 3E-09 77.8 5.2 40 47-86 3-42 (384)
234 3c4a_A Probable tryptophan hyd 97.4 7.2E-05 2.5E-09 78.3 4.3 34 49-82 2-37 (381)
235 3oc4_A Oxidoreductase, pyridin 97.4 0.00078 2.7E-08 72.1 12.5 53 186-246 191-243 (452)
236 2wpf_A Trypanothione reductase 97.4 0.00069 2.4E-08 73.5 12.1 52 188-245 239-290 (495)
237 3ic9_A Dihydrolipoamide dehydr 97.4 0.00092 3.1E-08 72.4 13.1 33 48-80 175-207 (492)
238 1vdc_A NTR, NADPH dependent th 97.4 0.00093 3.2E-08 68.1 12.4 50 195-245 206-257 (333)
239 3hyw_A Sulfide-quinone reducta 97.4 4.8E-05 1.7E-09 81.1 2.7 31 49-79 4-36 (430)
240 1onf_A GR, grase, glutathione 97.4 0.00074 2.5E-08 73.3 12.2 55 188-247 221-275 (500)
241 1fec_A Trypanothione reductase 97.4 0.00063 2.2E-08 73.7 11.5 54 187-246 234-287 (490)
242 2iid_A L-amino-acid oxidase; f 97.4 9.2E-05 3.2E-09 80.4 4.8 40 46-85 32-71 (498)
243 3iwa_A FAD-dependent pyridine 97.4 0.00068 2.3E-08 73.1 11.4 53 186-245 204-256 (472)
244 2qae_A Lipoamide, dihydrolipoy 97.4 0.0011 3.9E-08 71.2 13.2 32 48-79 175-206 (468)
245 2a8x_A Dihydrolipoyl dehydroge 97.4 0.0012 4E-08 71.0 13.2 32 48-79 172-203 (464)
246 3r9u_A Thioredoxin reductase; 97.3 0.00061 2.1E-08 68.6 9.8 49 195-245 194-242 (315)
247 3lad_A Dihydrolipoamide dehydr 97.3 0.0013 4.5E-08 70.8 13.0 32 48-79 181-212 (476)
248 2vdc_G Glutamate synthase [NAD 97.3 0.00015 5.1E-09 77.8 5.2 36 46-81 121-156 (456)
249 2gqw_A Ferredoxin reductase; f 97.3 0.0014 4.7E-08 69.2 12.6 32 48-79 146-177 (408)
250 3s5w_A L-ornithine 5-monooxyge 97.3 0.0023 7.9E-08 68.6 14.5 47 197-245 329-375 (463)
251 2bc0_A NADH oxidase; flavoprot 97.3 0.00093 3.2E-08 72.3 11.4 32 48-79 195-226 (490)
252 3f8d_A Thioredoxin reductase ( 97.3 0.0016 5.4E-08 65.8 12.3 47 196-244 202-248 (323)
253 3o0h_A Glutathione reductase; 97.3 0.0011 3.9E-08 71.6 11.7 51 188-245 236-286 (484)
254 4dna_A Probable glutathione re 97.3 0.00098 3.4E-08 71.6 11.1 55 186-246 213-267 (463)
255 3qfa_A Thioredoxin reductase 1 97.3 0.0035 1.2E-07 68.3 15.3 31 49-79 212-242 (519)
256 1lvl_A Dihydrolipoamide dehydr 97.2 0.00053 1.8E-08 73.6 8.4 32 48-79 172-203 (458)
257 1b37_A Protein (polyamine oxid 97.2 0.00022 7.5E-09 76.9 5.2 40 46-85 3-43 (472)
258 1xdi_A RV3303C-LPDA; reductase 97.2 0.0019 6.3E-08 70.2 12.2 32 48-79 183-214 (499)
259 3lzw_A Ferredoxin--NADP reduct 97.2 0.0016 5.5E-08 66.1 10.8 49 194-244 199-247 (332)
260 3ntd_A FAD-dependent pyridine 97.1 0.003 1E-07 69.6 13.0 31 49-79 153-183 (565)
261 1ojt_A Surface protein; redox- 97.1 0.0013 4.5E-08 71.0 9.8 32 48-79 186-217 (482)
262 1o94_A Tmadh, trimethylamine d 97.0 0.00044 1.5E-08 78.7 5.7 36 46-81 388-423 (729)
263 1zk7_A HGII, reductase, mercur 97.0 0.0027 9.3E-08 68.2 11.7 32 48-79 177-208 (467)
264 1ps9_A 2,4-dienoyl-COA reducta 97.0 0.00049 1.7E-08 77.7 5.8 36 46-81 372-407 (671)
265 1xhc_A NADH oxidase /nitrite r 97.0 0.0016 5.5E-08 67.6 9.3 32 48-79 144-175 (367)
266 2a87_A TRXR, TR, thioredoxin r 97.0 0.002 6.8E-08 65.8 9.9 49 195-245 202-250 (335)
267 2z3y_A Lysine-specific histone 97.0 0.00047 1.6E-08 77.6 5.5 40 45-84 105-144 (662)
268 3ics_A Coenzyme A-disulfide re 97.0 0.0028 9.5E-08 70.3 11.2 32 48-79 188-219 (588)
269 4a5l_A Thioredoxin reductase; 96.9 0.004 1.4E-07 62.7 11.1 48 197-245 201-248 (314)
270 1m6i_A Programmed cell death p 96.9 0.0038 1.3E-07 67.5 11.6 51 188-245 230-280 (493)
271 2xag_A Lysine-specific histone 96.9 0.00065 2.2E-08 78.0 5.6 40 45-84 276-315 (852)
272 1gte_A Dihydropyrimidine dehyd 96.8 0.00093 3.2E-08 79.0 5.8 54 192-246 378-441 (1025)
273 3kd9_A Coenzyme A disulfide re 96.8 0.0054 1.8E-07 65.4 11.4 32 48-79 149-180 (449)
274 1lqt_A FPRA; NADP+ derivative, 96.8 0.00064 2.2E-08 72.9 4.0 35 47-81 3-44 (456)
275 1m6i_A Programmed cell death p 96.8 0.00068 2.3E-08 73.5 4.1 36 45-80 9-46 (493)
276 4b1b_A TRXR, thioredoxin reduc 96.8 0.0077 2.6E-07 65.7 12.3 31 49-79 225-255 (542)
277 1cjc_A Protein (adrenodoxin re 96.6 0.0012 4.3E-08 70.7 4.4 35 47-81 6-42 (460)
278 4eqs_A Coenzyme A disulfide re 96.6 0.0054 1.8E-07 65.3 9.2 31 49-79 149-179 (437)
279 3l8k_A Dihydrolipoyl dehydroge 96.5 0.0076 2.6E-07 64.6 10.2 32 48-79 173-204 (466)
280 1vg0_A RAB proteins geranylger 96.5 0.0022 7.4E-08 70.9 5.8 56 184-244 378-434 (650)
281 2gag_A Heterotetrameric sarcos 96.5 0.0042 1.4E-07 72.8 8.6 54 194-247 326-383 (965)
282 4g6h_A Rotenone-insensitive NA 96.4 0.012 4E-07 63.8 11.0 55 185-244 273-329 (502)
283 3d1c_A Flavin-containing putat 96.0 0.017 5.7E-07 59.5 9.0 31 49-79 168-198 (369)
284 3ayj_A Pro-enzyme of L-phenyla 96.0 0.0023 7.8E-08 71.7 2.3 34 47-80 56-97 (721)
285 3klj_A NAD(FAD)-dependent dehy 95.9 0.0029 9.9E-08 66.1 2.5 33 48-80 147-179 (385)
286 4gcm_A TRXR, thioredoxin reduc 95.7 0.083 2.8E-06 52.9 12.7 31 49-79 147-177 (312)
287 1lqt_A FPRA; NADP+ derivative, 95.6 0.032 1.1E-06 59.6 9.4 58 186-245 248-324 (456)
288 3fbs_A Oxidoreductase; structu 95.6 0.016 5.6E-07 57.4 6.5 48 400-466 246-293 (297)
289 2lfc_A Fumarate reductase, fla 95.3 0.0069 2.4E-07 54.7 2.5 28 291-319 7-37 (160)
290 3gwf_A Cyclohexanone monooxyge 95.2 0.3 1E-05 53.2 15.6 33 48-80 179-211 (540)
291 3uox_A Otemo; baeyer-villiger 94.9 0.14 4.8E-06 55.9 12.0 33 48-80 186-218 (545)
292 1o94_A Tmadh, trimethylamine d 94.8 0.047 1.6E-06 61.9 8.2 32 48-79 529-562 (729)
293 1ps9_A 2,4-dienoyl-COA reducta 94.7 0.072 2.4E-06 59.8 9.3 50 190-247 579-628 (671)
294 4fk1_A Putative thioredoxin re 93.7 0.054 1.9E-06 54.1 5.0 49 399-465 252-300 (304)
295 3sx6_A Sulfide-quinone reducta 93.3 0.1 3.4E-06 55.3 6.5 57 399-467 284-346 (437)
296 3h28_A Sulfide-quinone reducta 92.6 0.13 4.4E-06 54.3 6.1 57 400-467 274-335 (430)
297 2bcg_G Secretory pathway GDP d 92.5 0.12 4.2E-06 54.9 5.9 44 44-87 8-51 (453)
298 3g5s_A Methylenetetrahydrofola 92.5 0.39 1.3E-05 49.6 9.1 41 419-469 326-366 (443)
299 3h8l_A NADH oxidase; membrane 92.2 0.18 6.1E-06 52.7 6.6 52 190-247 62-113 (409)
300 2cul_A Glucose-inhibited divis 92.0 0.12 4.1E-06 49.4 4.4 33 47-79 3-35 (232)
301 2g1u_A Hypothetical protein TM 91.8 0.17 5.7E-06 45.0 4.9 32 48-79 20-51 (155)
302 1d5t_A Guanine nucleotide diss 91.7 0.11 3.7E-06 55.0 4.1 42 45-86 4-45 (433)
303 3hyw_A Sulfide-quinone reducta 91.6 0.18 6.1E-06 53.2 5.7 57 400-467 274-335 (430)
304 3fwz_A Inner membrane protein 90.8 0.31 1.1E-05 42.4 5.5 32 48-79 8-39 (140)
305 3llv_A Exopolyphosphatase-rela 90.6 0.26 8.9E-06 42.8 4.8 31 49-79 8-38 (141)
306 1lss_A TRK system potassium up 90.0 0.3 1E-05 42.0 4.7 31 49-79 6-36 (140)
307 3ic5_A Putative saccharopine d 88.7 0.36 1.2E-05 40.0 4.1 31 49-79 7-38 (118)
308 2hmt_A YUAA protein; RCK, KTN, 88.3 0.41 1.4E-05 41.3 4.4 31 49-79 8-38 (144)
309 3dfz_A SIRC, precorrin-2 dehyd 88.1 0.37 1.3E-05 45.7 4.1 32 48-79 32-63 (223)
310 1id1_A Putative potassium chan 88.0 0.58 2E-05 41.2 5.2 31 49-79 5-35 (153)
311 1kyq_A Met8P, siroheme biosynt 87.7 0.34 1.2E-05 47.5 3.7 32 48-79 14-45 (274)
312 3kkj_A Amine oxidase, flavin-c 87.1 0.43 1.5E-05 45.6 4.1 39 419-467 292-330 (336)
313 1vg0_A RAB proteins geranylger 86.9 0.9 3.1E-05 50.1 6.9 42 45-86 6-47 (650)
314 3c85_A Putative glutathione-re 86.7 0.5 1.7E-05 43.1 4.1 32 48-79 40-72 (183)
315 2x5o_A UDP-N-acetylmuramoylala 86.2 0.7 2.4E-05 48.8 5.4 34 49-82 7-40 (439)
316 4dio_A NAD(P) transhydrogenase 85.8 0.6 2E-05 48.3 4.4 33 47-79 190-222 (405)
317 3l4b_C TRKA K+ channel protien 84.6 0.83 2.8E-05 42.9 4.6 31 49-79 2-32 (218)
318 1f0y_A HCDH, L-3-hydroxyacyl-C 84.0 0.89 3E-05 45.2 4.7 31 49-79 17-47 (302)
319 1pjc_A Protein (L-alanine dehy 83.9 0.85 2.9E-05 46.7 4.6 32 48-79 168-199 (361)
320 3p2y_A Alanine dehydrogenase/p 83.2 0.71 2.4E-05 47.4 3.6 33 47-79 184-216 (381)
321 2vvm_A Monoamine oxidase N; FA 83.2 1.4 4.9E-05 46.9 6.3 39 47-85 39-77 (495)
322 2xve_A Flavin-containing monoo 83.0 0.83 2.8E-05 48.6 4.3 32 48-79 198-229 (464)
323 2gv8_A Monooxygenase; FMO, FAD 82.9 0.86 2.9E-05 48.1 4.3 32 48-79 213-245 (447)
324 3lk7_A UDP-N-acetylmuramoylala 82.8 0.76 2.6E-05 48.7 3.8 31 49-79 11-41 (451)
325 1x13_A NAD(P) transhydrogenase 82.5 0.94 3.2E-05 47.1 4.3 32 48-79 173-204 (401)
326 1pzg_A LDH, lactate dehydrogen 82.4 1 3.4E-05 45.6 4.4 32 48-79 10-42 (331)
327 1jw9_B Molybdopterin biosynthe 81.9 0.89 3E-05 43.9 3.7 35 47-81 31-66 (249)
328 4ffl_A PYLC; amino acid, biosy 81.7 1.2 4.1E-05 45.5 4.7 31 50-80 4-34 (363)
329 3ado_A Lambda-crystallin; L-gu 81.5 1.2 4.1E-05 44.6 4.5 32 48-79 7-38 (319)
330 1l7d_A Nicotinamide nucleotide 81.4 1.1 3.8E-05 46.2 4.4 33 47-79 172-204 (384)
331 1rp0_A ARA6, thiazole biosynth 81.4 0.55 1.9E-05 46.3 2.0 46 419-466 231-276 (284)
332 2a9f_A Putative malic enzyme ( 81.3 1 3.6E-05 46.1 4.0 34 46-79 187-221 (398)
333 3rui_A Ubiquitin-like modifier 80.7 1.5 5.1E-05 44.3 4.8 37 46-82 33-70 (340)
334 2eez_A Alanine dehydrogenase; 80.5 1.3 4.6E-05 45.4 4.6 32 48-79 167-198 (369)
335 3i83_A 2-dehydropantoate 2-red 80.5 1.3 4.5E-05 44.4 4.5 31 49-79 4-34 (320)
336 1nyt_A Shikimate 5-dehydrogena 80.3 1.3 4.5E-05 43.2 4.3 31 49-79 121-151 (271)
337 3oj0_A Glutr, glutamyl-tRNA re 79.7 0.86 2.9E-05 39.6 2.5 32 48-79 22-53 (144)
338 2vhw_A Alanine dehydrogenase; 79.1 1.6 5.4E-05 45.0 4.6 32 48-79 169-200 (377)
339 4dgk_A Phytoene dehydrogenase; 79.1 1.2 4.1E-05 47.5 3.9 38 49-86 3-40 (501)
340 3hn2_A 2-dehydropantoate 2-red 78.9 1.4 4.7E-05 44.0 4.0 31 49-79 4-34 (312)
341 4ap3_A Steroid monooxygenase; 78.9 1.2 4E-05 48.5 3.7 33 48-80 192-224 (549)
342 3h8v_A Ubiquitin-like modifier 78.4 1.5 5E-05 43.3 3.9 36 46-81 35-71 (292)
343 4e12_A Diketoreductase; oxidor 78.1 1.9 6.6E-05 42.3 4.7 31 49-79 6-36 (283)
344 3ghy_A Ketopantoate reductase 77.9 1.8 6.1E-05 43.7 4.5 31 49-79 5-35 (335)
345 3phh_A Shikimate dehydrogenase 77.8 1.8 6.1E-05 42.2 4.2 32 48-79 119-150 (269)
346 1vl6_A Malate oxidoreductase; 77.7 1.6 5.3E-05 44.7 3.9 34 46-79 191-225 (388)
347 3k96_A Glycerol-3-phosphate de 77.7 2 6.9E-05 43.8 4.9 32 48-79 30-61 (356)
348 1lld_A L-lactate dehydrogenase 77.3 1.9 6.4E-05 43.1 4.5 31 49-79 9-41 (319)
349 1pjq_A CYSG, siroheme synthase 77.3 1.7 5.8E-05 46.0 4.3 32 48-79 13-44 (457)
350 3eag_A UDP-N-acetylmuramate:L- 76.9 2 6.7E-05 43.2 4.5 31 49-79 6-37 (326)
351 3tnl_A Shikimate dehydrogenase 76.6 2.1 7.3E-05 42.7 4.6 32 48-79 155-187 (315)
352 3ond_A Adenosylhomocysteinase; 76.5 1.9 6.5E-05 45.6 4.3 32 48-79 266-297 (488)
353 3g17_A Similar to 2-dehydropan 76.4 1.7 5.7E-05 43.0 3.8 31 49-79 4-34 (294)
354 1ks9_A KPA reductase;, 2-dehyd 76.0 2.2 7.5E-05 41.7 4.5 32 49-80 2-33 (291)
355 3jsk_A Cypbp37 protein; octame 75.7 1.1 3.8E-05 45.4 2.2 45 419-465 291-335 (344)
356 3l9w_A Glutathione-regulated p 75.7 2.4 8.3E-05 44.2 4.9 31 49-79 6-36 (413)
357 1p77_A Shikimate 5-dehydrogena 75.7 1.7 5.9E-05 42.4 3.6 32 48-79 120-151 (272)
358 3vtf_A UDP-glucose 6-dehydroge 75.1 2.3 8E-05 44.5 4.5 33 47-79 21-53 (444)
359 3vh1_A Ubiquitin-like modifier 75.0 2.4 8.2E-05 46.0 4.7 37 46-82 326-363 (598)
360 3qha_A Putative oxidoreductase 75.0 2 6.8E-05 42.5 3.9 33 48-80 16-48 (296)
361 2egg_A AROE, shikimate 5-dehyd 75.0 2.2 7.5E-05 42.3 4.1 32 48-79 142-174 (297)
362 3jyo_A Quinate/shikimate dehyd 74.9 2.4 8.1E-05 41.7 4.3 32 48-79 128-160 (283)
363 2raf_A Putative dinucleotide-b 74.8 2.5 8.7E-05 39.3 4.4 31 49-79 21-51 (209)
364 2y0c_A BCEC, UDP-glucose dehyd 74.6 2.3 7.9E-05 45.2 4.5 32 48-79 9-40 (478)
365 4gsl_A Ubiquitin-like modifier 74.5 2.6 9E-05 45.8 4.8 37 46-82 325-362 (615)
366 1bg6_A N-(1-D-carboxylethyl)-L 74.5 2.4 8.3E-05 42.9 4.5 31 49-79 6-36 (359)
367 1zud_1 Adenylyltransferase THI 74.3 2 7E-05 41.3 3.7 35 47-81 28-63 (251)
368 4a9w_A Monooxygenase; baeyer-v 74.3 2.9 0.0001 41.8 5.0 31 48-79 164-194 (357)
369 3don_A Shikimate dehydrogenase 74.2 2.3 7.9E-05 41.6 4.0 32 48-79 118-150 (277)
370 2ew2_A 2-dehydropantoate 2-red 74.1 2.4 8.3E-05 41.9 4.3 31 49-79 5-35 (316)
371 3u62_A Shikimate dehydrogenase 74.0 3 0.0001 40.2 4.8 31 49-79 110-141 (253)
372 2gjc_A Thiazole biosynthetic e 73.7 1.6 5.4E-05 43.9 2.7 43 420-464 282-324 (326)
373 2dpo_A L-gulonate 3-dehydrogen 73.7 2.8 9.5E-05 42.0 4.6 31 49-79 8-38 (319)
374 2ewd_A Lactate dehydrogenase,; 73.5 2.4 8.3E-05 42.3 4.1 31 49-79 6-37 (317)
375 3t4e_A Quinate/shikimate dehyd 73.4 2.9 9.9E-05 41.7 4.6 32 48-79 149-181 (312)
376 1b37_A Protein (polyamine oxid 73.3 2.7 9.4E-05 44.4 4.7 56 184-246 206-269 (472)
377 3h5n_A MCCB protein; ubiquitin 73.1 2.4 8.2E-05 43.2 4.0 36 46-81 117-153 (353)
378 2hjr_A Malate dehydrogenase; m 73.0 3 0.0001 41.9 4.7 31 49-79 16-47 (328)
379 1lu9_A Methylene tetrahydromet 72.4 3.1 0.00011 40.8 4.6 32 48-79 120-152 (287)
380 3fbt_A Chorismate mutase and s 72.3 2.6 8.9E-05 41.4 3.9 32 48-79 123-155 (282)
381 3pwz_A Shikimate dehydrogenase 72.1 3 0.0001 40.7 4.3 32 48-79 121-153 (272)
382 3ego_A Probable 2-dehydropanto 72.1 3 0.0001 41.5 4.3 30 49-79 4-33 (307)
383 3hwr_A 2-dehydropantoate 2-red 71.5 3.1 0.00011 41.5 4.4 30 48-78 20-49 (318)
384 4g65_A TRK system potassium up 71.5 2.1 7.3E-05 45.3 3.2 31 49-79 5-35 (461)
385 2v6b_A L-LDH, L-lactate dehydr 71.4 3.1 0.00011 41.3 4.3 31 49-79 2-34 (304)
386 4a7p_A UDP-glucose dehydrogena 71.2 3.3 0.00011 43.6 4.6 34 47-80 8-41 (446)
387 3d4o_A Dipicolinate synthase s 71.2 3.4 0.00012 40.7 4.5 32 48-79 156-187 (293)
388 3gg2_A Sugar dehydrogenase, UD 71.2 3 0.0001 44.0 4.3 31 49-79 4-34 (450)
389 2rir_A Dipicolinate synthase, 71.1 3.4 0.00012 40.8 4.5 32 48-79 158-189 (300)
390 3o8q_A Shikimate 5-dehydrogena 71.1 3.5 0.00012 40.5 4.4 32 48-79 127-159 (281)
391 2qyt_A 2-dehydropantoate 2-red 71.0 2.2 7.6E-05 42.3 3.2 30 49-78 10-45 (317)
392 1nvt_A Shikimate 5'-dehydrogen 71.0 2.7 9.1E-05 41.4 3.7 30 49-79 130-159 (287)
393 3tl2_A Malate dehydrogenase; c 71.0 3.9 0.00013 40.8 4.9 32 48-79 9-41 (315)
394 3o38_A Short chain dehydrogena 70.8 4.4 0.00015 39.0 5.2 31 49-79 24-56 (266)
395 2vns_A Metalloreductase steap3 70.0 4.4 0.00015 37.8 4.8 31 49-79 30-60 (215)
396 2dvm_A Malic enzyme, 439AA lon 69.8 4.1 0.00014 42.6 4.9 30 48-77 187-219 (439)
397 1zcj_A Peroxisomal bifunctiona 69.7 3.3 0.00011 43.9 4.2 31 49-79 39-69 (463)
398 2qrj_A Saccharopine dehydrogen 69.6 3.7 0.00013 42.1 4.4 33 47-79 214-250 (394)
399 1jay_A Coenzyme F420H2:NADP+ o 69.1 4.2 0.00015 37.6 4.5 30 50-79 3-33 (212)
400 1y6j_A L-lactate dehydrogenase 69.0 4 0.00014 40.8 4.5 32 48-79 8-41 (318)
401 1tt5_B Ubiquitin-activating en 68.7 4.6 0.00016 42.3 5.0 36 46-81 39-75 (434)
402 3orq_A N5-carboxyaminoimidazol 68.6 6.1 0.00021 40.5 5.9 33 48-80 13-45 (377)
403 3ce6_A Adenosylhomocysteinase; 68.5 3.8 0.00013 43.6 4.3 32 48-79 275-306 (494)
404 3k6j_A Protein F01G10.3, confi 68.1 3.9 0.00013 43.1 4.3 31 49-79 56-86 (460)
405 1leh_A Leucine dehydrogenase; 67.9 4 0.00014 41.6 4.2 31 48-78 174-204 (364)
406 1npy_A Hypothetical shikimate 67.8 3.7 0.00013 40.1 3.8 32 48-79 120-152 (271)
407 1z82_A Glycerol-3-phosphate de 67.7 4.2 0.00014 40.9 4.4 32 48-79 15-46 (335)
408 1txg_A Glycerol-3-phosphate de 67.6 3.3 0.00011 41.4 3.6 29 50-78 3-31 (335)
409 3uog_A Alcohol dehydrogenase; 67.6 4.5 0.00016 41.1 4.7 32 48-79 191-222 (363)
410 1t2d_A LDH-P, L-lactate dehydr 67.6 4.6 0.00016 40.4 4.6 31 49-79 6-37 (322)
411 1mv8_A GMD, GDP-mannose 6-dehy 67.4 3.3 0.00011 43.5 3.6 31 49-79 2-32 (436)
412 3g0o_A 3-hydroxyisobutyrate de 67.3 4.5 0.00015 40.0 4.5 31 49-79 9-39 (303)
413 3two_A Mannitol dehydrogenase; 67.1 4.4 0.00015 40.9 4.4 32 48-79 178-209 (348)
414 3dtt_A NADP oxidoreductase; st 67.1 5 0.00017 38.3 4.6 32 48-79 20-51 (245)
415 1pqw_A Polyketide synthase; ro 67.0 3.3 0.00011 37.9 3.2 31 49-79 41-72 (198)
416 3gvp_A Adenosylhomocysteinase 67.0 4.4 0.00015 42.1 4.3 32 48-79 221-252 (435)
417 4e21_A 6-phosphogluconate dehy 67.0 4.6 0.00016 41.1 4.5 32 48-79 23-54 (358)
418 2uyy_A N-PAC protein; long-cha 66.9 5.8 0.0002 39.3 5.2 32 48-79 31-62 (316)
419 3q2o_A Phosphoribosylaminoimid 66.7 4.6 0.00016 41.5 4.6 31 49-79 16-46 (389)
420 3pid_A UDP-glucose 6-dehydroge 66.6 4.4 0.00015 42.3 4.3 30 49-79 38-67 (432)
421 2aef_A Calcium-gated potassium 66.5 2.8 9.6E-05 39.6 2.7 31 48-79 10-40 (234)
422 2hk9_A Shikimate dehydrogenase 66.4 3.8 0.00013 40.0 3.6 32 48-79 130-161 (275)
423 2o7s_A DHQ-SDH PR, bifunctiona 66.3 3.5 0.00012 44.5 3.6 31 49-79 366-396 (523)
424 1y8q_A Ubiquitin-like 1 activa 66.0 4.7 0.00016 40.8 4.3 36 46-81 35-71 (346)
425 1yqd_A Sinapyl alcohol dehydro 65.9 5 0.00017 40.9 4.6 32 48-79 189-220 (366)
426 3g79_A NDP-N-acetyl-D-galactos 65.4 4 0.00014 43.3 3.8 32 49-80 20-53 (478)
427 3l6d_A Putative oxidoreductase 65.0 7.2 0.00025 38.6 5.5 32 48-79 10-41 (306)
428 1c1d_A L-phenylalanine dehydro 65.0 5 0.00017 40.7 4.3 31 48-78 176-206 (355)
429 3pef_A 6-phosphogluconate dehy 64.9 5.1 0.00018 39.2 4.3 31 49-79 3-33 (287)
430 1uuf_A YAHK, zinc-type alcohol 64.4 5.5 0.00019 40.6 4.6 31 49-79 197-227 (369)
431 1gpj_A Glutamyl-tRNA reductase 64.4 4 0.00014 42.3 3.6 32 48-79 168-200 (404)
432 1guz_A Malate dehydrogenase; o 64.3 5.4 0.00019 39.6 4.4 31 49-79 2-34 (310)
433 1piw_A Hypothetical zinc-type 64.2 4.7 0.00016 40.9 4.0 31 49-79 182-212 (360)
434 3e8x_A Putative NAD-dependent 64.2 6.2 0.00021 37.1 4.6 31 49-79 23-54 (236)
435 2d5c_A AROE, shikimate 5-dehyd 64.1 6 0.0002 38.2 4.5 31 49-79 118-148 (263)
436 3h2s_A Putative NADH-flavin re 64.1 6.3 0.00021 36.5 4.6 30 50-79 3-33 (224)
437 3ew7_A LMO0794 protein; Q8Y8U8 64.0 6.5 0.00022 36.2 4.7 30 50-79 3-33 (221)
438 3doj_A AT3G25530, dehydrogenas 64.0 6.1 0.00021 39.2 4.7 31 49-79 23-53 (310)
439 3s2e_A Zinc-containing alcohol 63.9 4.7 0.00016 40.5 3.9 31 49-79 169-199 (340)
440 1e3j_A NADP(H)-dependent ketos 63.7 5.9 0.0002 40.0 4.6 31 49-79 171-201 (352)
441 2d8a_A PH0655, probable L-thre 63.6 5.8 0.0002 40.0 4.6 31 49-79 170-201 (348)
442 3tum_A Shikimate dehydrogenase 63.6 5.7 0.0002 38.6 4.2 32 48-79 126-158 (269)
443 4eez_A Alcohol dehydrogenase 1 63.4 6 0.00021 39.8 4.6 31 49-79 166-197 (348)
444 3mog_A Probable 3-hydroxybutyr 63.3 5.7 0.0002 42.2 4.6 31 49-79 7-37 (483)
445 2pv7_A T-protein [includes: ch 62.9 6.2 0.00021 38.9 4.5 31 49-79 23-54 (298)
446 1zej_A HBD-9, 3-hydroxyacyl-CO 62.8 6 0.00021 39.0 4.3 32 47-79 12-43 (293)
447 1pl8_A Human sorbitol dehydrog 62.8 6.2 0.00021 39.9 4.6 31 49-79 174-205 (356)
448 2cdc_A Glucose dehydrogenase g 62.6 5 0.00017 40.9 3.8 31 49-79 183-213 (366)
449 1kjq_A GART 2, phosphoribosylg 62.6 7.5 0.00026 39.8 5.3 32 48-79 12-43 (391)
450 1a5z_A L-lactate dehydrogenase 62.5 4.8 0.00016 40.2 3.6 31 49-79 2-34 (319)
451 4e4t_A Phosphoribosylaminoimid 62.4 6.9 0.00024 40.7 5.0 32 48-79 36-67 (419)
452 1rjw_A ADH-HT, alcohol dehydro 62.4 4.8 0.00016 40.5 3.6 31 49-79 167-197 (339)
453 2f1k_A Prephenate dehydrogenas 62.4 6.1 0.00021 38.3 4.3 30 50-79 3-32 (279)
454 2hcy_A Alcohol dehydrogenase 1 62.4 6.8 0.00023 39.5 4.8 31 49-79 172-203 (347)
455 3uko_A Alcohol dehydrogenase c 62.4 5.2 0.00018 40.9 4.0 32 48-79 195-227 (378)
456 1evy_A Glycerol-3-phosphate de 62.3 4 0.00014 41.6 3.0 31 49-79 17-47 (366)
457 3c7a_A Octopine dehydrogenase; 62.2 4.3 0.00015 42.0 3.3 29 49-77 4-33 (404)
458 2dq4_A L-threonine 3-dehydroge 62.0 6.5 0.00022 39.5 4.6 31 49-79 167-198 (343)
459 1v3u_A Leukotriene B4 12- hydr 62.0 6.8 0.00023 39.2 4.7 31 49-79 148-179 (333)
460 1hdo_A Biliverdin IX beta redu 61.9 7.5 0.00025 35.3 4.6 31 49-79 5-36 (206)
461 3nx4_A Putative oxidoreductase 61.6 6.3 0.00022 39.2 4.3 31 49-79 149-180 (324)
462 3pqe_A L-LDH, L-lactate dehydr 61.6 5.8 0.0002 39.8 4.0 31 48-78 6-38 (326)
463 1dlj_A UDP-glucose dehydrogena 61.6 5.3 0.00018 41.4 3.8 30 49-79 2-31 (402)
464 1ur5_A Malate dehydrogenase; o 61.5 6.4 0.00022 39.1 4.3 31 49-79 4-35 (309)
465 3fpc_A NADP-dependent alcohol 61.4 6.6 0.00023 39.7 4.5 31 48-78 168-199 (352)
466 2cf5_A Atccad5, CAD, cinnamyl 61.3 5.8 0.0002 40.2 4.0 31 49-79 183-213 (357)
467 3gpi_A NAD-dependent epimerase 61.3 7.8 0.00027 37.5 4.9 32 49-80 5-36 (286)
468 1y56_A Hypothetical protein PH 61.3 5.8 0.0002 42.3 4.2 47 192-245 265-311 (493)
469 4gx0_A TRKA domain protein; me 61.0 7.2 0.00025 42.3 5.0 34 48-81 349-382 (565)
470 3aw8_A PURK, phosphoribosylami 60.7 6.3 0.00022 40.0 4.2 30 50-79 2-31 (369)
471 3cky_A 2-hydroxymethyl glutara 60.3 5.9 0.0002 38.9 3.8 31 49-79 6-36 (301)
472 2g5c_A Prephenate dehydrogenas 60.2 7.1 0.00024 37.9 4.3 31 49-79 3-35 (281)
473 3k31_A Enoyl-(acyl-carrier-pro 60.2 9.8 0.00033 37.3 5.4 31 49-79 32-65 (296)
474 3k5i_A Phosphoribosyl-aminoimi 60.0 6.6 0.00023 40.6 4.3 30 48-77 25-54 (403)
475 4b7c_A Probable oxidoreductase 60.0 6.4 0.00022 39.4 4.0 32 48-79 151-183 (336)
476 3gvi_A Malate dehydrogenase; N 60.0 7.9 0.00027 38.7 4.7 32 48-79 8-40 (324)
477 1y8q_B Anthracycline-, ubiquit 59.8 6 0.00021 43.4 4.0 35 47-81 17-52 (640)
478 4eye_A Probable oxidoreductase 59.8 6.4 0.00022 39.6 4.0 32 48-79 161-193 (342)
479 4dll_A 2-hydroxy-3-oxopropiona 59.8 5.8 0.0002 39.6 3.6 32 48-79 32-63 (320)
480 1e3i_A Alcohol dehydrogenase, 59.7 6.9 0.00024 39.9 4.3 31 49-79 198-229 (376)
481 3n58_A Adenosylhomocysteinase; 59.6 7.2 0.00025 40.6 4.3 32 48-79 248-279 (464)
482 1u7z_A Coenzyme A biosynthesis 59.6 7.7 0.00027 36.5 4.2 31 49-79 10-57 (226)
483 1h2b_A Alcohol dehydrogenase; 59.5 6.3 0.00021 40.0 3.9 31 49-79 189-220 (359)
484 1hyh_A L-hicdh, L-2-hydroxyiso 59.5 5.8 0.0002 39.4 3.6 31 49-79 3-35 (309)
485 4huj_A Uncharacterized protein 59.5 6.3 0.00021 36.9 3.6 31 49-79 25-56 (220)
486 2h78_A Hibadh, 3-hydroxyisobut 59.3 6 0.0002 39.0 3.6 31 49-79 5-35 (302)
487 4fs3_A Enoyl-[acyl-carrier-pro 59.1 7.6 0.00026 37.2 4.3 30 50-79 9-41 (256)
488 2dkn_A 3-alpha-hydroxysteroid 59.0 8.8 0.0003 36.2 4.7 30 50-79 4-34 (255)
489 3qsg_A NAD-binding phosphogluc 59.0 6 0.00021 39.3 3.6 31 49-79 26-57 (312)
490 4ej6_A Putative zinc-binding d 58.9 7.3 0.00025 39.7 4.3 31 48-78 184-215 (370)
491 1edz_A 5,10-methylenetetrahydr 58.8 5.9 0.0002 39.5 3.4 33 47-79 177-210 (320)
492 2dph_A Formaldehyde dismutase; 58.8 6.4 0.00022 40.6 3.9 31 49-79 188-219 (398)
493 3ggo_A Prephenate dehydrogenas 58.8 7.7 0.00026 38.6 4.3 31 49-79 35-67 (314)
494 3pdu_A 3-hydroxyisobutyrate de 58.8 5.4 0.00018 39.0 3.2 31 49-79 3-33 (287)
495 2h6e_A ADH-4, D-arabinose 1-de 58.8 6 0.00021 39.8 3.6 30 49-78 173-204 (344)
496 4ezb_A Uncharacterized conserv 58.7 7.2 0.00025 38.8 4.1 31 49-79 26-57 (317)
497 2p4q_A 6-phosphogluconate dehy 58.7 8.7 0.0003 41.0 5.0 33 47-79 10-42 (497)
498 3qwb_A Probable quinone oxidor 58.7 6.9 0.00023 39.2 4.0 31 49-79 151-182 (334)
499 2jhf_A Alcohol dehydrogenase E 58.5 7.5 0.00026 39.6 4.3 31 49-79 194-225 (374)
500 2pd4_A Enoyl-[acyl-carrier-pro 58.5 7.6 0.00026 37.6 4.2 30 50-79 9-41 (275)
No 1
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=100.00 E-value=1.1e-104 Score=888.17 Aligned_cols=591 Identities=71% Similarity=1.169 Sum_probs=531.8
Q ss_pred CcccccccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCC
Q 046556 40 GYTIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWL 119 (633)
Q Consensus 40 ~~~~~~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~ 119 (633)
+++.++.++||||||||+|||+||+.|+++|++|+||||....++++..++||+++..+....|+++.++.|+++.+.++
T Consensus 11 ~~~~~~~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l 90 (621)
T 2h88_A 11 QYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWL 90 (621)
T ss_dssp CSCEEEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTC
T ss_pred CCccccccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCC
Confidence 35566788999999999999999999999999999999998888888889999988776656788999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCC
Q 046556 120 GDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNT 199 (633)
Q Consensus 120 ~~~~~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv 199 (633)
++++.++.+++.+++.++||+++|++|.+..+|.+....+++++.+++.+...+|.++..+.+|..++..|.+++++.|+
T Consensus 91 ~d~~~v~~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv 170 (621)
T 2h88_A 91 GDQDAIHYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDT 170 (621)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999888888877888888776655555688877788899999999999999999
Q ss_pred EEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCCCCCCCCCCCCchHHHHHHHHcCCCccCccc
Q 046556 200 QFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVSRAGLPLEDLEF 279 (633)
Q Consensus 200 ~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e~ 279 (633)
+|++++.|++|+. ++++|+||.+.+..+|+...|.|+.||+||||++.+|..+++++.+||||+.||+++|+.+.+|||
T Consensus 171 ~i~~~~~v~~Li~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~y~~~t~~~~~tGdG~~mA~raGa~l~~me~ 249 (621)
T 2h88_A 171 SYFVEYFALDLLM-ENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEF 249 (621)
T ss_dssp EEEETEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTCCEECTTC
T ss_pred EEEEceEEEEEEE-ECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccccCCcCCCCCCChHHHHHHHHcCCCcccCcc
Confidence 9999999999998 678999999987668888889999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCcceeeeccccCCCcEEECCCCCccccccCCccccccchhHHhHHHHHHHHhcCCCCCCCCeEEEecCCC
Q 046556 280 VQFHPTGIYGAGCLLLKVGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHL 359 (633)
Q Consensus 280 ~~~~p~~~~~~~~~~~~~~~~g~g~~~vn~~G~rf~~~~~~~~~~l~~r~~~~~~i~~e~~~g~g~~~~~~~v~~d~~~~ 359 (633)
+||||+++++.++++ +++++++|++++|.+|+|||++|.|...++.+||+++++|..++.++++..+..+.||+|++++
T Consensus 250 ~q~hPt~~~~~~~l~-se~~rg~g~ilvn~~G~RF~~~y~p~~~ela~rdvv~rai~~e~~~g~g~~~~~~~v~ld~~~l 328 (621)
T 2h88_A 250 VQFHPTGIYGAGCLI-TEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGCGPEKDHVYLQLHHL 328 (621)
T ss_dssp EEEEEEEETTTCCBC-CTHHHHTTCEEECTTCCCTHHHHSTTTGGGSCHHHHHHHHHHHHHTTCCBTTTTCBEEEECTTS
T ss_pred eeeecccccCCccee-cccccCCccEEECCCCCCcccccCcccccccchHHHHHHHHHHHHhcCCcccCCCeEEEEcccC
Confidence 999999998888877 8999999999999999999999999888999999999999999999888655556799999999
Q ss_pred ChhHHHHHhHHHHHHHHHHcCCCCCCCCeeccccccccccCcccCCCCceeeecCCCCCCcccCeeeecccccccccCCC
Q 046556 360 PPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGDDPDEVVPGLMAAGEAACASVHGAN 439 (633)
Q Consensus 360 ~~~~l~~~~~~~~~~~~~~~G~d~~~~~i~v~p~~~~~~GGi~vd~~~~vl~~d~~~~~T~ipGLyAaGe~a~~g~~Ga~ 439 (633)
+++.++++++.+++.+..+.|+||.++|+||.|++||+||||.||.++|||+.+.. ++|+||||||||||+|+++||+|
T Consensus 329 ~~~~l~~~~~~i~~~~~~~~G~D~~~~pi~v~p~~h~tmGGi~~d~~~~Vl~~~~~-~~t~IpGLyAaGE~a~~g~hGan 407 (621)
T 2h88_A 329 PPQQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVITHVNG-EDKVVPGLYACGEAASASVHGAN 407 (621)
T ss_dssp CHHHHHHHCHHHHHHHHHHHCCCTTTSCEEEEEEEEEESCBEEBCTTSEEEEEETT-EEEEEEEEEECGGGEECSSSTTS
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEeecccccCcEeECCCCeEeecccC-CCcccCceEEccccccccccCCC
Confidence 99999999999999888767999999999999999999999999999999973221 45899999999999878999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHhCCCCCCCCCccchhhhHHHHHHHhhhcCCCCChHHHHHHHHHHhhccceEeeCHH
Q 046556 440 RLGANSLLDIVVFGRACANRVAEIQRPGEKQKPLENNAGERTVAWLDKIRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQE 519 (633)
Q Consensus 440 rlgg~~l~~a~~~G~~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~~~~r~~~ 519 (633)
|||||||++|+|||++||++|+++++........+....+...+.+..++..++..++.+++.+||++||+|+|++|+++
T Consensus 408 rlggnsL~~~~vfGr~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~gi~R~~~ 487 (621)
T 2h88_A 408 RLGANSLLDLVVFGRACALTIAETCKPGEPVPSIKPNAGEESVANLDKLRFADGTIRTSEARLNMQKTMQSHAAVFRTGS 487 (621)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHHHHCCTTCCCCCCCTTTTHHHHHHHHHHHTCBSSEEHHHHHHHHHHHHHHHSSSSBCHH
T ss_pred CCchHhHHHHHHHHHHHHHHHHHhhhccccccccchhHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHhhhceeEecCHH
Confidence 99999999999999999999999875322222223233344556677777666677899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhCcCCccccccCCCCCCCcc-------
Q 046556 520 TLEEGCQLIDKAWESFHDVKLTDRSLIWNTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDE------- 592 (633)
Q Consensus 520 ~l~~~l~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~e~~~~l~~a~~~~~~al~R~ESRG~h~R~D~P~~d~~------- 592 (633)
+|++++++|++|+++++++.+.|.+..||++|++++|++|||++|+++++|||+|+||||+|||+|||++||+
T Consensus 488 ~L~~a~~~l~~l~~~~~~~~~~~~~~~~n~~l~~~~e~~~~l~~a~~~~~~al~R~ESRG~H~R~D~p~~dd~~~~~~~~ 567 (621)
T 2h88_A 488 ILQEGCEKLSQIYRDLAHLKTFDRGIVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKLRIDEFDYSKPL 567 (621)
T ss_dssp HHHHHHHHHHHHHHGGGGEECCCCCSTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCBTTBCSCCCSSCTTSCC
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHhCcccccceecccCcccCccccccCCc
Confidence 9999999999999999999999888889999999999999999999999999999999999999999999999
Q ss_pred ----------cccceEEEEee--CCeeEEeeeeccccccC-CcccccCCCCCCC
Q 046556 593 ----------NWMKHTLGYWE--NEKVRLDYRPVHMNTLD-DEIESFPPKARVY 633 (633)
Q Consensus 593 ----------~~~~~~~~~~~--~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 633 (633)
||+||++++++ ++++++.++||...+++ .++..++|+.|.|
T Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~r~y 621 (621)
T 2h88_A 568 QGQQKRPFEEHWRKHTLSYVDVKSGKVTLKYRPVIDRTLNEEDCSSVPPAIRSY 621 (621)
T ss_dssp TTCCCCCGGGCCCEEEEEEEETTTTEEEEEEEECCCCCSCTTTSCCCCCCCCCC
T ss_pred ccccCCcchhccceeEEEEEcCCCCceEEEecccccccccccccceeCCcCCCC
Confidence 99999998875 47899999999988876 3477899999998
No 2
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=100.00 E-value=5e-99 Score=842.60 Aligned_cols=583 Identities=54% Similarity=0.870 Sum_probs=507.6
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHHH
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDA 124 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~ 124 (633)
+.++||||||||+|||+||+.|+++|++|+||||....+|++..++||+.+..+....++++.++.++++.+.++++++.
T Consensus 5 ~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~ 84 (588)
T 2wdq_A 5 VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDA 84 (588)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHH
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 45789999999999999999999999999999999877788888999998876654468888899999988889999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCCEEEEE
Q 046556 125 IQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVE 204 (633)
Q Consensus 125 v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv~i~~~ 204 (633)
+..+++.+++.++||.++|++|....++.+....+++++..++. ...+|.++..+.+|..++..|.+++++.|++|+++
T Consensus 85 v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~-~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~ 163 (588)
T 2wdq_A 85 IEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGG-EQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSE 163 (588)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTC-SBCCCEECSTTCHHHHHHHHHHHHHHHTTCEEEET
T ss_pred HHHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccc-cCcceEEEcCCCCHHHHHHHHHHHHHhCCCEEEeC
Confidence 99999999999999999999999887777766666766533221 12346677778889999999999999999999999
Q ss_pred EEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCCCCCCCCCCCCchHHHHHHHHcCCCccCcccccccc
Q 046556 205 YFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVSRAGLPLEDLEFVQFHP 284 (633)
Q Consensus 205 ~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e~~~~~p 284 (633)
+.|++|+.+++++|+||.+.+..+|+...|.|+.||+||||++..|..+++++.+||||+.||+++|+.+.+|||+||||
T Consensus 164 ~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~y~~~~~~~~~tGdG~~ma~~aGa~l~~me~~q~hp 243 (588)
T 2wdq_A 164 WYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHP 243 (588)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTCCEECTTCEEEEE
T ss_pred cEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccccCCcCCCCCchHHHHHHHHHcCCCEeChhHhheec
Confidence 99999998437899999998766788778999999999999999999888999999999999999999999999999999
Q ss_pred ccccCCcceeeeccccCCCcEEECCCCCccccccCCccccccchhHHhHHHHHHHHhcCCC-CCCCCeEEEecCCCChhH
Q 046556 285 TGIYGAGCLLLKVGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGV-GPLKDHIYLHLNHLPPDV 363 (633)
Q Consensus 285 ~~~~~~~~~~~~~~~~g~g~~~vn~~G~rf~~~~~~~~~~l~~r~~~~~~i~~e~~~g~g~-~~~~~~v~~d~~~~~~~~ 363 (633)
+.+.+.+.++ ++++++.|+++||.+|+|||++|.|...++.+|++++++|..++.+++++ .+....+|+|+++++++.
T Consensus 244 t~~~~~~~l~-~e~~rg~g~ilvn~~G~RF~~~~~~~~~el~~rd~v~~ai~~~~~~~~~~~~~~~~~v~ld~~~~~~~~ 322 (588)
T 2wdq_A 244 TGIAGAGVLV-TEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEV 322 (588)
T ss_dssp EEETTTCCBC-CTHHHHTTCEEECTTCCCTHHHHCTTTGGGSCHHHHHHHHHHHHHTTCSBCSTTCSBEEEECGGGHHHH
T ss_pred ceecCCccee-eehhccCCcEEECCCCCCCccccCcccchhccHHHHHHHHHHHHHhCCCccCCCCCeEEEecccCCHHH
Confidence 9988777776 88899999999999999999999998789999999999999999988765 223457999999999999
Q ss_pred HHHHhHHHHHHHHHHcCCCCCCCCeeccccccccccCcccCCCCceeeecCCCCCCcccCeeeecccccccccCCCCCCh
Q 046556 364 LKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGDDPDEVVPGLMAAGEAACASVHGANRLGA 443 (633)
Q Consensus 364 l~~~~~~~~~~~~~~~G~d~~~~~i~v~p~~~~~~GGi~vd~~~~vl~~d~~~~~T~ipGLyAaGe~a~~g~~Ga~rlgg 443 (633)
+.++++.+.+.+..+.|+||.++|+||.|++||+||||.||.+++||+.+.++++++||||||||||+|+++||+|||||
T Consensus 323 ~~~~~~~i~e~~~~~~GiD~~~~~i~v~p~~h~t~GGi~vd~~~~vl~~~~~~~g~~I~GLyAaGe~a~~g~hG~nrl~g 402 (588)
T 2wdq_A 323 LESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGG 402 (588)
T ss_dssp HHHHCHHHHHHHHHHTCCCTTTSCEEEEEEEEEECCBEEBCTTCEEEEECTTSCEEEEEEEEECGGGEECSSSTTSCCTT
T ss_pred HHHHhhHHHHHHHHhCCCCCCCCcEEEeccccccCceEEECCCCCCcccccccCCCeeCCceeCccccccCCCCCCCCcc
Confidence 99999999998876569999999999999999999999999999999864333447999999999998789999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCCCCCCCCccchhhhHHHHHHHhhhcCCCCChHHHHHHHHHHhhccceEeeCHHHHHH
Q 046556 444 NSLLDIVVFGRACANRVAEIQRPGEKQKPLENNAGERTVAWLDKIRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEE 523 (633)
Q Consensus 444 ~~l~~a~~~G~~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~~~~r~~~~l~~ 523 (633)
|||++|+|||++||++|+++++......+.+........+.+..++..++..++.+++.+||++||+|+|++|++++|++
T Consensus 403 nsl~~~~vfG~~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~gi~R~~~~L~~ 482 (588)
T 2wdq_A 403 NSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAK 482 (588)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHCCCCCCCHHHHHHTTHHHHHHHHCCSSBCHHHHHHHHHHHHHHHSSSSBCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhhccCcccccchhhhhhHHHHHHHhhccCCCcCHHHHHHHHHHHHhhcCcEecCHHHHHH
Confidence 99999999999999999987642111122222222333345555655556678999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhCcCCccccccCCCCCCCcccccceEEEEee
Q 046556 524 GCQLIDKAWESFHDVKLTDRSLIWNTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWE 603 (633)
Q Consensus 524 ~l~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~e~~~~l~~a~~~~~~al~R~ESRG~h~R~D~P~~d~~~~~~~~~~~~~ 603 (633)
|+++|++|++++.++.+.+.+..||++|++++|++||+++|+++++|||+||||||+|||+|||++||++|+++++++ +
T Consensus 483 a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~e~~~~~~~a~~~~~~al~R~ESRG~H~r~D~p~~~~~~~~~~~~~~-~ 561 (588)
T 2wdq_A 483 GLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYL-P 561 (588)
T ss_dssp HHHHHHHHHHHHTTBCCCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCBSSSCSCCHHHHSSEEEEE-T
T ss_pred HHHHHHHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhCccceeeeecccCCccChhhhheeEEEE-C
Confidence 999999999999889998888889999999999999999999999999999999999999999999999999999887 3
Q ss_pred CCeeEEeeeeccccccCCcccccCCCCCCC
Q 046556 604 NEKVRLDYRPVHMNTLDDEIESFPPKARVY 633 (633)
Q Consensus 604 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (633)
|+++++++||.+ .++++.+|+|.+|.|
T Consensus 562 -~~~~~~~~~v~~--~~~~~~~~~~~~r~y 588 (588)
T 2wdq_A 562 -ESESMTRRSVNM--EPKLRPAFPPKIRTY 588 (588)
T ss_dssp -TTTEEEEECCCC--CCSSSCCCCCCCCCC
T ss_pred -CCceEEEeeccC--ccccccccCCCCCCC
Confidence 568999999982 123466799999998
No 3
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=100.00 E-value=8e-99 Score=846.43 Aligned_cols=564 Identities=38% Similarity=0.644 Sum_probs=498.8
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCC---cCCHHHHHHHHHhcCCCCCC
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMT---EDDWRWHMYDTVKGSDWLGD 121 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~---~d~~~~~~~d~~~~~~~~~~ 121 (633)
+.++||||||||+|||+||+.|+++|++|+||||....+|++.+++||+.+..++.. .|+++.++.|+++.+.++++
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~g~~ds~~~~~~dt~~~g~~~~d 82 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWGCD 82 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGGGGCCSCEECCCCCSGGGTTCCHHHHHHHHHHHTTTCSC
T ss_pred cccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcccccCCCeEeccCCcccCCCCCHHHHHHHHHHhcCCCCC
Confidence 457999999999999999999999999999999998888999999999988766533 68899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCcccccCCCc---------------------ccccccCCcccccCCCCccceeEEccC
Q 046556 122 QDAIQYMCREAPKAVIELENYGLPFSRTEDGK---------------------IYQRAFGGQSLDFGKGGQAYRCACAAD 180 (633)
Q Consensus 122 ~~~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~---------------------~~~~~~gg~~~~~~~g~~~~r~~~~~~ 180 (633)
++.+..+++.+++.++||+++|++|.+..+|. +....+++ ...+|.++..+
T Consensus 83 ~~~v~~~~~~s~~~i~~L~~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~~~~~~~gg--------~~~~R~~~~~d 154 (660)
T 2bs2_A 83 QKVARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGG--------TKKWRTCYTAD 154 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBCCBCCTT--------CSSCCEECSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCceecCCCcccccccccccccccchhhhhhhccccccc--------cccceeEeeCC
Confidence 99999999999999999999999998766554 22222333 33457777778
Q ss_pred CchHHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCCCCCCCCCCCCc
Q 046556 181 RTGHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCT 260 (633)
Q Consensus 181 ~~g~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~t 260 (633)
.+|..++..|.+.+++.|++|++++.|++|+. ++++|+||.+.+..+|+...|+|+.||+||||++.+|..+++++.+|
T Consensus 155 ~tG~~l~~~L~~~a~~~gv~i~~~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~y~~tt~~~~~t 233 (660)
T 2bs2_A 155 ATGHTMLFAVANECLKLGVSIQDRKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCE 233 (660)
T ss_dssp CHHHHHHHHHHHHHHHHTCEEECSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGGSSSBSSCTTCS
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhhcCCCCCCCCcc
Confidence 88999999999999999999999999999998 67899999998767888888999999999999999999999999999
Q ss_pred hHHHHHHHHcCC-CccCccccccccccccCCcceeeeccccCCCcEEECCCCCccccccCCccccccchhHHhHHHHHHH
Q 046556 261 GDGNAMVSRAGL-PLEDLEFVQFHPTGIYGAGCLLLKVGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEI 339 (633)
Q Consensus 261 Gdg~~~a~~aGa-~l~~~e~~~~~p~~~~~~~~~~~~~~~~g~g~~~vn~~G~rf~~~~~~~~~~l~~r~~~~~~i~~e~ 339 (633)
|||+.||+++|+ .+.+|||+||||+++++.++++ ++++++.|++++|.+|+|||++|.|...++.+||+++++|..++
T Consensus 234 GdG~~mA~~aGa~~l~~me~~q~hPt~~~~~~~l~-se~~rg~g~ilvn~~G~RF~~~y~p~~~ela~rdvv~rai~~~~ 312 (660)
T 2bs2_A 234 GTGTAIALETGIAQLGNMEAVQFHPTPLFPSGILL-TEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVSRRMIEHI 312 (660)
T ss_dssp CHHHHHHHTTSSSCEECTTCEEEESCBBTTTCCBC-CTHHHHHTCEEECTTCCBCHHHHCTTTGGGSCHHHHHHHHHHHH
T ss_pred cHHHHHHHHcCCChhcCchhheecccccCCCccee-cccccCCCcEEECCCCCCcCcccCcccccccchHHHHHHHHHHH
Confidence 999999999999 9999999999999998878777 88899999999999999999999988789999999999999999
Q ss_pred HhcCCC-CCCCCeEEEecCCCChhHHHHHhHHHHHHHHHHcCCCCCCCCeeccccccccccCcccCCCCceeeecCCCCC
Q 046556 340 REGRGV-GPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGDDPD 418 (633)
Q Consensus 340 ~~g~g~-~~~~~~v~~d~~~~~~~~l~~~~~~~~~~~~~~~G~d~~~~~i~v~p~~~~~~GGi~vd~~~~vl~~d~~~~~ 418 (633)
.+++++ .+....+|+|+++++++.+.++++.+.+.+..+.|+||.++|+||.|++||+||||.||.+++
T Consensus 313 ~~g~g~~~~~~~~v~ld~~~~~~~~~~~~~p~i~e~~~~~~GiD~~~~~ipv~p~~hyt~GGi~vd~~~~---------- 382 (660)
T 2bs2_A 313 RKGKGVQSPYGQHLWLDISILGRKHIETNLRDVQEICEYFAGIDPAEKWAPVLPMQHYSMGGIRTDYRGE---------- 382 (660)
T ss_dssp HTTTSBCCTTCCBEEEECGGGCHHHHHHHSHHHHHHHHHTSCCCTTTSCEEECCEEEEECCEEECCTTSB----------
T ss_pred HhcCCccCCCCCEEEEECCCCCHHHHHHHhHHHHHHHHHhcCCCCcccceEeeeeeeeccceEEECCCCc----------
Confidence 988775 233457999999999999999999999988866799999999999999999999999999998
Q ss_pred CcccCeeeecccccccccCCCCCChhhHHHHHHHHHHHHHHHHHHhCCCCCC--CCCccchhhhHHHHHHHhhhcCCCCC
Q 046556 419 EVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQRPGEKQ--KPLENNAGERTVAWLDKIRNSNGSIP 496 (633)
Q Consensus 419 T~ipGLyAaGe~a~~g~~Ga~rlgg~~l~~a~~~G~~Ag~~aa~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (633)
|+||||||||||+|+++||+||||||||++|+|||++||++|+++++..... ...+........+.+..++..++..+
T Consensus 383 v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (660)
T 2bs2_A 383 AKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCANTQVDLETKTLEKFVKGQEAYMKSLVESKGTED 462 (660)
T ss_dssp CSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCBC
T ss_pred eecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCcccccccchhHHHHHHHHHHHHhhccCCCC
Confidence 8999999999998889999999999999999999999999999887421110 01111122334455666666666788
Q ss_pred hHHHHHHHHHHhhccceEeeCHHHHHHHHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhCcC
Q 046556 497 TSKIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDLIETIELENLLINACITMHSAEARKE 576 (633)
Q Consensus 497 ~~~~~~~l~~~m~~~~~~~r~~~~l~~~l~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~e~~~~l~~a~~~~~~al~R~E 576 (633)
+.+++.+||++||+|+|++|++++|++|+++|++|++++.++.+.+.+..||++|++++|++|||++|+++++|||+|+|
T Consensus 463 ~~~~~~~l~~~m~~~~gi~R~~~~L~~a~~~l~~l~~~~~~~~~~~~~~~~n~~l~~~~e~~~~l~~a~~~~~~Al~R~E 542 (660)
T 2bs2_A 463 VFKIKNRMKDVMDDNVGIFRDGPHLEKAVKELEELYKKSKNVGIKNKRLHANPELEEAYRVPMMLKVALCVAKGALDRTE 542 (660)
T ss_dssp HHHHHHHHHHHHHHHSSSSBCHHHHHHHHHHHHHHHHHHTTBCCSCCCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHhcCceecCHHHHHHHHHHHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred CccccccCCCCCCCcccccceEEEEeeC---CeeEEeeeeccccccCCcccccCCCCCCC
Q 046556 577 SRGAHAREDFTKRDDENWMKHTLGYWEN---EKVRLDYRPVHMNTLDDEIESFPPKARVY 633 (633)
Q Consensus 577 SRG~h~R~D~P~~d~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (633)
|||+|||+|||++||++|++++++++++ ++++++++||.++. +.++|+.|.|
T Consensus 543 SRG~H~R~D~p~~dd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~r~y 597 (660)
T 2bs2_A 543 SRGAHNREDYPKRDDINWLNRTLASWPNPEQTLPTLEYEALDVNE-----MEIAPGYRGY 597 (660)
T ss_dssp CBTTBCBTTBCSEETTTCCEEEEEECCSTTCSSCEEEEEECCGGG-----CSSCSCCCSS
T ss_pred CceeeecccCcccCchhhceEEEEEecCCCCCcceEEEeeccccc-----cccCCccccc
Confidence 9999999999999999999999988773 68999999998642 3589999988
No 4
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=100.00 E-value=3.2e-95 Score=813.30 Aligned_cols=560 Identities=43% Similarity=0.714 Sum_probs=492.0
Q ss_pred cccccEEEECCchHHHHHHHHHHhCC--CcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCH
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHG--FNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQ 122 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G--~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~ 122 (633)
+.++||||||||+|||+||+.|+++| ++|+||||....++++.+++||+++.... .++++.++.|+++.+.+++++
T Consensus 3 ~~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~--~ds~~~~~~d~~~~g~~~~d~ 80 (602)
T 1kf6_A 3 TFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQD--HDSFEYHFHDTVAGGDWLCEQ 80 (602)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCST--TCCHHHHHHHHHHHTTTCSCH
T ss_pred cccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCC--CCCHHHHHHHHHHhcCCCCCH
Confidence 45689999999999999999999999 99999999877778888889999876653 688999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCC-CEE
Q 046556 123 DAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHN-TQF 201 (633)
Q Consensus 123 ~~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~g-v~i 201 (633)
+.+..+++++++.++||.++|++|...+++.++...+++++. +|.++..+.+|..++..|.+++++.| +++
T Consensus 81 ~~v~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~--------~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i 152 (602)
T 1kf6_A 81 DVVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKI--------ERTWFAADKTGFHMLHTLFQTSLQFPQIQR 152 (602)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSS--------CCEECSTTCHHHHHHHHHHHHHTTCTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccC--------CeEEEcCCCCHHHHHHHHHHHHHhCCCcEE
Confidence 999999999999999999999999988777666555665543 47777778889999999999999888 999
Q ss_pred EEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCCCCCCCCCCCCchHHHHHHHHcCCCccCccccc
Q 046556 202 FVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVSRAGLPLEDLEFVQ 281 (633)
Q Consensus 202 ~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e~~~ 281 (633)
++++.|++|+. ++++|+||.+.+..+|+...|+|+.||+|||+++.+|..+++++.++|||+.|++++|+.+.+|||+|
T Consensus 153 ~~~~~v~~l~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~~~~~~~tGdgi~~a~~aGa~~~~~e~~q 231 (602)
T 1kf6_A 153 FDEHFVLDILV-DDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQ 231 (602)
T ss_dssp EETEEEEEEEE-ETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSBSSCTTCSCHHHHHHHTTTCCEESTTCEE
T ss_pred EeCCEEEEEEE-eCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCcCCCCCcccHHHHHHHHcCCCccChhHhh
Confidence 99999999998 57899999888767888778999999999999999998888889999999999999999999999999
Q ss_pred cccccccCCcceeeeccccCCCcEEECCCCCccccccC---------Cccc--cccchhHHhHHHHHHHHhcCCC-CCCC
Q 046556 282 FHPTGIYGAGCLLLKVGSRGEGGILRNSEGERFMERYA---------PTAK--DLASRDVVSRSMTMEIREGRGV-GPLK 349 (633)
Q Consensus 282 ~~p~~~~~~~~~~~~~~~~g~g~~~vn~~G~rf~~~~~---------~~~~--~l~~r~~~~~~i~~e~~~g~g~-~~~~ 349 (633)
|||+++.+.++++ ++++++.|++++|.+|+|||++|. |... ++.+|+++++++..++.++++. .+..
T Consensus 232 fhPt~~~~~~~l~-~e~~rg~g~~lvn~~G~RF~~~y~~~~~~~~~~p~~~~~el~~rd~v~~ai~~~~~~g~g~~~~~~ 310 (602)
T 1kf6_A 232 YHPTGLPGSGILM-TEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRG 310 (602)
T ss_dssp EEEEECTTTCCBC-CTHHHHTTCEEECTTCCCGGGGTTTCSCCCSSCCCTTSGGGSCHHHHHHHHHHHHHHTCSBCCTTC
T ss_pred ccccccCCCccee-chhhcCCceEEECCCCCCccccccccccccccCCcccccccccHHHHHHHHHHHHHhcCCccCCCC
Confidence 9999988777777 899999999999999999999998 6556 8999999999999999988763 2334
Q ss_pred CeEEEecCCCChhHHHHHhHHHHHHHHHHcCCCCCCCCeeccccccccccCcccCCCCceeeecCCCCCCcccCeeeecc
Q 046556 350 DHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGDDPDEVVPGLMAAGE 429 (633)
Q Consensus 350 ~~v~~d~~~~~~~~l~~~~~~~~~~~~~~~G~d~~~~~i~v~p~~~~~~GGi~vd~~~~vl~~d~~~~~T~ipGLyAaGe 429 (633)
+.||+|.++++++.+.++++.+++.+..+.|+||.++|+||.|+.||+||||.||.+++ |+|||||||||
T Consensus 311 ~~v~ld~~~~~~~~l~~~~~~~~~~~~~~~G~D~~~~pi~v~p~~h~t~GGi~vd~~~~----------~~IpGLyAaGe 380 (602)
T 1kf6_A 311 DVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCE----------TRIKGLFAVGE 380 (602)
T ss_dssp CBEEEECGGGCHHHHHHHCHHHHHHHHHHHCCCTTTSCEEEEEEEEEECCEEECCTTSB----------CSSBTEEECGG
T ss_pred cEEEeecccCCHHHHHHHHHHHHHHHHHhcCCCCCcCceEEehhheeeCCeEEECCCCc----------cccCCEEEccc
Confidence 57999999999999999999999999876799999999999999999999999999998 89999999999
Q ss_pred cccccccCCCCCChhhHHHHHHHHHHHHHHHHHHhCCCCCCCCC-ccchhhhHHHHHHHhhhcCCCCChHHHHHHHHHHh
Q 046556 430 AACASVHGANRLGANSLLDIVVFGRACANRVAEIQRPGEKQKPL-ENNAGERTVAWLDKIRNSNGSIPTSKIRLNMQRVM 508 (633)
Q Consensus 430 ~a~~g~~Ga~rlgg~~l~~a~~~G~~Ag~~aa~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m 508 (633)
|+|+++||+||||||||++|+|||++||++|++++......... .........+.+..++..++..++.+++.+||++|
T Consensus 381 ~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m 460 (602)
T 1kf6_A 381 CSSVGLHGANRLGSNSLAELVVFGRLAGEQATERAATAGNGNEAAIEAQAAGVEQRLKDLVNQDGGENWAKIRDEMGLAM 460 (602)
T ss_dssp GEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHCCCCBCHHHHHHHHHHHH
T ss_pred cccccccCCCCCccHHHHHHHHHHHHHHHHHHHhhhccCCCCcchhhhhhHHHHHHHhhhhccCCCcCHHHHHHHHHHHH
Confidence 99889999999999999999999999999999986322111000 00112223344455555666678999999999999
Q ss_pred hccceEeeCHHHHHHHHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhCcCCccccccCC--C
Q 046556 509 QNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDLIETIELENLLINACITMHSAEARKESRGAHARED--F 586 (633)
Q Consensus 509 ~~~~~~~r~~~~l~~~l~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~e~~~~l~~a~~~~~~al~R~ESRG~h~R~D--~ 586 (633)
|+|+|++|++++|++++++|++|++++.++.+.+....||++|++++|++|||++|++|++|||+|+||||+|||+| |
T Consensus 461 ~~~~gi~R~~~~L~~a~~~l~~l~~~~~~~~~~~~~~~~n~~l~~~~e~~~~~~~a~~~~~~al~R~ESRG~H~r~D~~~ 540 (602)
T 1kf6_A 461 EEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIELGHGLNVAECMAHSAMARKESRGAHQRLDEGC 540 (602)
T ss_dssp HHHSSSSBCHHHHHHHHHHHHHHHHHHTTBCCCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCBCSTTC
T ss_pred HhcCCeecCHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhCcCccceEEecccCC
Confidence 99999999999999999999999999988999888888999999999999999999999999999999999999999 9
Q ss_pred CCCCcccccceEEEEeeC-CeeEEeeeeccccccCCcccccCCCCCCC
Q 046556 587 TKRDDENWMKHTLGYWEN-EKVRLDYRPVHMNTLDDEIESFPPKARVY 633 (633)
Q Consensus 587 P~~d~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (633)
|++||++|+++++.++++ +++.++++||.+. .++|..|.|
T Consensus 541 p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~r~y 581 (602)
T 1kf6_A 541 TERDDVNFLKHTLAFRDADGTTRLEYSDVKIT-------TLPPAKRVY 581 (602)
T ss_dssp SSCCTTTCCEEEEEEECTTSCEEEEEEECCCS-------SCCCC----
T ss_pred CccCchhhheEEEEEEcCCCCceEEEeecccc-------ccCCcCccc
Confidence 999999999999988875 7899999999743 478888887
No 5
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=100.00 E-value=1e-88 Score=763.72 Aligned_cols=544 Identities=20% Similarity=0.244 Sum_probs=435.9
Q ss_pred cccccccccEEEECCchHHHHHHHHHHhC------CCcEEEEeecCCCCCccccccc--ceeeecCCCCcCCHHHHHHHH
Q 046556 41 YTIVDHTYDAVVVGAGGAGLRAAIGLSEH------GFNTACITKLFPTRSHTVAAQG--GINAALGNMTEDDWRWHMYDT 112 (633)
Q Consensus 41 ~~~~~~~~DVlIIGgG~AGl~AA~~aa~~------G~~V~vlEk~~~~~g~t~~~~G--g~~~~~~~~~~d~~~~~~~d~ 112 (633)
+++...++||||||||+|||+||+.|+++ |++|+||||....++++ .++| |+++.++ .++++.++.++
T Consensus 16 ~~~~~~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s-~AqG~~gi~a~l~---~ds~e~~~~~~ 91 (662)
T 3gyx_A 16 PIIVEHSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGA-VAQGLSAINTYLG---DNNADDYVRMV 91 (662)
T ss_dssp CCCEEEECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCST-TTTCEEEECCCCT---TSCHHHHHHHH
T ss_pred CccceEEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcc-cccCcchheeecC---CCCHHHHHHHH
Confidence 33445789999999999999999999997 99999999987766655 5788 7776654 57788888888
Q ss_pred HhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccccc-CCCcccc----cccCCcccccCCCCccceeEEccCCchHHHH
Q 046556 113 VKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRT-EDGKIYQ----RAFGGQSLDFGKGGQAYRCACAADRTGHALL 187 (633)
Q Consensus 113 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~Gv~f~~~-~~g~~~~----~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~ 187 (633)
+..+.++++++.++.+++++++.++||+++|++|.+. ++|.++. ..+++.... .++...|..+..+.+|..+.
T Consensus 92 ~~~~~gl~d~~~v~~l~~~a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~~fg~~~~~--gg~~~~r~~~~~~~~G~~i~ 169 (662)
T 3gyx_A 92 RTDLMGLVREDLIYDLGRHVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAGKSLRN--GDKPVRSGRWQIMINGESYK 169 (662)
T ss_dssp HHHTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHTCCTTT--TCCBCCSSTTCEEEEETSHH
T ss_pred HHhcCCCccHHHHHHHHHHHHHHHHHHHHcCCCceecCCCCccccchhhhcccccccc--CccccccceecccCCHHHHH
Confidence 8888899999999999999999999999999999886 6666542 112222111 11222233222334567888
Q ss_pred HHHHHHHHhC--CCEEEEEEEEEEEEEccC--CcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCCCCCCCC--------
Q 046556 188 HTLYGQAMKH--NTQFFVEYFALDLIMNSD--GTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATS-------- 255 (633)
Q Consensus 188 ~~l~~~a~~~--gv~i~~~~~v~~L~~d~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~-------- 255 (633)
..|.+++++. ||+|++++.|++|+.+++ |+|+||.+.+..+|+...|+|+.|||||||++++|.++++
T Consensus 170 ~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~y~~~t~~~~~~~~~ 249 (662)
T 3gyx_A 170 VIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNVYRPRSVGEGMGRAW 249 (662)
T ss_dssp HHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCS
T ss_pred HHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCcccccccCcCCcccccccc
Confidence 8899998887 999999999999999433 3999999988778888889999999999999999887554
Q ss_pred -CCCCchHHHHHHHHcCCCccCccccccccccccC----C--cceeeeccccCCCcEEECCCCCccccccCCccc-----
Q 046556 256 -AHTCTGDGNAMVSRAGLPLEDLEFVQFHPTGIYG----A--GCLLLKVGSRGEGGILRNSEGERFMERYAPTAK----- 323 (633)
Q Consensus 256 -~~~~tGdg~~~a~~aGa~l~~~e~~~~~p~~~~~----~--~~~~~~~~~~g~g~~~vn~~G~rf~~~~~~~~~----- 323 (633)
++.+||||++||+++||.+.+||| ||||+.++. . .+++ ++ ++++|.+|+|||++|+|...
T Consensus 250 ~~~~~tGdG~~mA~~aGA~l~~me~-QfhPt~~~~~~~p~~~~~Li-se------~ilvn~~GeRFm~~~~p~~~~~~~~ 321 (662)
T 3gyx_A 250 YPVWNAGSTYTMCAQVGAEMTMMEN-RFVPARFKDGYGPVGAWFLL-FK------AKATNCKGEDYCATNRAMLKPYEER 321 (662)
T ss_dssp SCTTCBSHHHHHHHTTTCEEECTTC-CBCCEEETTTCCCCHHHHHH-HC------CCEECTTSCCHHHHTGGGGHHHHTT
T ss_pred CCCCCcchHHHHHHHhCCcccCCCe-eEeccccccCCCCCCceEEE-ee------eEEECCCCCEecCCcCchhhccccc
Confidence 789999999999999999999998 999998752 1 2344 33 68999999999999988654
Q ss_pred -----cccchhHHhHHHHHHHHhcCCCCCCCCeEEEecCC--------CChhHHHH-----------HhHHHHHHHHHHc
Q 046556 324 -----DLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH--------LPPDVLKE-----------RLPGISETAAIFA 379 (633)
Q Consensus 324 -----~l~~r~~~~~~i~~e~~~g~g~~~~~~~v~~d~~~--------~~~~~l~~-----------~~~~~~~~~~~~~ 379 (633)
+|+|||+++++|+.|+++|+|+ ||+|+++ ++++.++. ++|.+...+. ..
T Consensus 322 ~y~~~eLapRDvvsrai~~e~~~G~g~------v~LD~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~i~~~~~-~~ 394 (662)
T 3gyx_A 322 GYAKGHVIPTCLRNHMMLREMREGRGP------IYMDTKTALQTSFATMSPAQQKHLEAEAWEDFLDMCVGQANLWA-AT 394 (662)
T ss_dssp TSSTTTCCCHHHHTHHHHHHHHTTCCC------CEECHHHHHHHHTTTSCHHHHHHHHHHHHHHHHTTCHHHHHHHH-HT
T ss_pred cccccccCchHHHHHHHHHHHHcCCCc------EEEEccCcchhcccccCHHHHHhhhhhhHHHHHHhChHHHHHHH-Hc
Confidence 7999999999999999998875 9999987 77665532 2355555554 48
Q ss_pred CCCCCCCCeeccccccccccC------cccCCCCceeeecC----------CCCCCcccCeeeecccccccccCCCCCCh
Q 046556 380 GVDVTKEPIPVLPTVHYNMGG------IPTNHHGEVVTIKG----------DDPDEVVPGLMAAGEAACASVHGANRLGA 443 (633)
Q Consensus 380 G~d~~~~~i~v~p~~~~~~GG------i~vd~~~~vl~~d~----------~~~~T~ipGLyAaGe~a~~g~~Ga~rlgg 443 (633)
|+||.++||||.|++||+||| |+||.+++|+..++ .+.+|+||||||||||+|.++||+ ++
T Consensus 395 giD~~~~pipV~P~~Hy~mGG~~~~~Gi~vd~~~~~~~~~~~~~~~~~~~~~~~~t~v~gl~a~Ge~~~~~~hg~---~~ 471 (662)
T 3gyx_A 395 NCAPEERGSEIMPTEPYLLGSHSGCCGIWASGPDEAWVPEDYKVRAANGKVYNRMTTVEGLWTCADGVGASGHKF---SS 471 (662)
T ss_dssp TCCTTTCCEEEEECCCBBCSSSSCCCEECCCCCCCTTSCGGGCCCCTTSCCCTTBCSSBTEECCSSSBCSCCCCH---HH
T ss_pred CCCcccCceeeeeccceecccccccCceeecCccccccccccccccccccccCCCCccCCeEeCccccccccCcc---Hh
Confidence 999999999999999999996 89997776554321 125699999999999998899997 78
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCCCCCCCCccchhhhHHHHHHHhhhc--------------CCCCChHHHHHHHHHHhh
Q 046556 444 NSLLDIVVFGRACANRVAEIQRPGEKQKPLENNAGERTVAWLDKIRNS--------------NGSIPTSKIRLNMQRVMQ 509 (633)
Q Consensus 444 ~~l~~a~~~G~~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~l~~~m~ 509 (633)
|||.++.++|+.|++++.. .....+.+....+...+.+..++.. .+..++.+++++||++||
T Consensus 472 ~sl~~g~~ag~~a~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~~M~ 547 (662)
T 3gyx_A 472 GSHAEGRIVGKQMVRWYLD----HKDFKPEFVETAEELKTLIYRPYYNYEKGKGASTCPVVNPEYISPKNFMMRLIKCTD 547 (662)
T ss_dssp HHHHHHHHHHHHHHHHHHH----TCSCCCCCSSCHHHHHHHHTHHHHHHHHHGGGCSSSSSCSSSBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhh----CCCCCCCCHHHHHHHHHHHHHHHhhhhhccccccccccCCCCcCHHHHHHHHHHHHH
Confidence 8877655555555544433 2111222222223333333332221 245789999999999999
Q ss_pred ccce----EeeCHH-HHHHHHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhCcCCc--cccc
Q 046556 510 NNAA----VFRTQE-TLEEGCQLIDKAWESFHDVKLTDRSLIWNTDLIETIELENLLINACITMHSAEARKESR--GAHA 582 (633)
Q Consensus 510 ~~~~----~~r~~~-~l~~~l~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~e~~~~l~~a~~~~~~al~R~ESR--G~h~ 582 (633)
+|+| ++|+++ +|++|+++|++|++++.++.+.| +|+|++++|++|||++|+++++|||+||||| |+||
T Consensus 548 ~~~g~~~~v~R~~~~~L~~al~~l~~l~~~~~~~~~~~-----~~~l~~~~E~~~~l~~a~~~~~~al~R~ESR~~G~H~ 622 (662)
T 3gyx_A 548 EYGGGVGTYYNTSKALLDTGFWLMEMLEEDSLKLAARD-----LHELLRCWENYHRLWTVRLHMQHIAFREESRYPGFYY 622 (662)
T ss_dssp HHTTCTTTTTEECHHHHHHHHHHHHHHHHHGGGBCCSS-----HHHHHHHHHHHHHHHHHHHHHHHHHHCCSCSSTTTCE
T ss_pred HhcCCCccEEEcCHHHHHHHHHHHHHHHHHHhcCcCCC-----hHHHHHHHHHHhHHHHHHHHHHHHHhCccccccccee
Confidence 9999 999987 99999999999999999998887 3899999999999999999999999999999 9999
Q ss_pred cCCCCCCCcccccceEEEEee--CCeeEEeeeecccc
Q 046556 583 REDFTKRDDENWMKHTLGYWE--NEKVRLDYRPVHMN 617 (633)
Q Consensus 583 R~D~P~~d~~~~~~~~~~~~~--~g~~~~~~~~~~~~ 617 (633)
|+|||++||++|+||++++++ +|+++++++||..+
T Consensus 623 R~D~P~~dd~~w~~~~~~~~~~~~g~~~~~~~p~~~~ 659 (662)
T 3gyx_A 623 RADFLGLDDSKWKCFVNSKYDPAKKETKIFKKPYYQI 659 (662)
T ss_dssp ETTSCSCCTTTCCSEEEEEEETTTTEEEEEEECCEEC
T ss_pred cccCCccCccccceEEEEEEcCCCCceEEEEeehhcc
Confidence 999999999999999999887 59999999999754
No 6
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=100.00 E-value=4.7e-88 Score=747.32 Aligned_cols=513 Identities=30% Similarity=0.460 Sum_probs=399.7
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHHH
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDA 124 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~ 124 (633)
+.++||||||||+|||+||+.|++ |++|+||||....+|++.+++||++...+ ..|+++.|+.++++.+.++++++.
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~--~~ds~~~~~~d~l~~g~g~~d~~~ 82 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGIAAVFD--ETDSIDSHVEDTLIAGAGICDRHA 82 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-------------CC--SHHHHHHHHHHHHHHTTTCCCHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCChhhcCCCEEEecC--CCCCHHHHHHHHHHhhcccCCHHH
Confidence 457999999999999999999999 99999999998888888899999987654 356788889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCcccccC----CCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHh-CCC
Q 046556 125 IQYMCREAPKAVIELENYGLPFSRTE----DGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMK-HNT 199 (633)
Q Consensus 125 v~~~~~~~~~~~~~l~~~Gv~f~~~~----~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~-~gv 199 (633)
++.+++.+++.++||.++|++|.... ++.+....+++++. +|.++..+.+|..+...|.+++++ .|+
T Consensus 83 v~~~~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~--------~r~~~~~d~~g~~l~~~L~~~~~~~~gv 154 (540)
T 1chu_A 83 VEFVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSH--------RRILHAADATGREVETTLVSKALNHPNI 154 (540)
T ss_dssp HHHHHHHHHHHHHHHHHTTCC----------------------------------------------CCCHHHHHHCTTE
T ss_pred HHHHHHhHHHHHHHHHHcCCCcccCcccCcCCcccccccccccc--------CeEEEeCCCCHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999998765 55554445555443 355555566788888999999988 799
Q ss_pred EEEEEEEEEEEEEccCC------cEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCCCCCCCCCCCCchHHHHHHHHcCCC
Q 046556 200 QFFVEYFALDLIMNSDG------TCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVSRAGLP 273 (633)
Q Consensus 200 ~i~~~~~v~~L~~d~~g------~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~tGdg~~~a~~aGa~ 273 (633)
+|++++.|++|+.++++ +|+||.+.+..+|+...|.|+.||+||||++.+|..+++++.+||||+.||+++|+.
T Consensus 155 ~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~tGdG~~ma~~aGa~ 234 (540)
T 1chu_A 155 RVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCR 234 (540)
T ss_dssp EEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGGSSSBSCGGGCSCHHHHHHHHTTCC
T ss_pred EEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcccccCCCcCCCCCchHHHHHHHHcCCC
Confidence 99999999999984345 899999987567887789999999999999999988889999999999999999999
Q ss_pred ccCccccccccccccCC---cceeeeccccCCCcEEECCCCCccccccCCccccccchhHHhHHHHHHHHhcCCCCCCCC
Q 046556 274 LEDLEFVQFHPTGIYGA---GCLLLKVGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKD 350 (633)
Q Consensus 274 l~~~e~~~~~p~~~~~~---~~~~~~~~~~g~g~~~vn~~G~rf~~~~~~~~~~l~~r~~~~~~i~~e~~~g~g~~~~~~ 350 (633)
+.+|||+||||+.++.+ ++++ ++.++++|++++|.+|+|||++|+|. .++.+|++++++|..++.++.. .
T Consensus 235 l~~~e~~q~hpt~~~~~~~~~~l~-~e~~rg~g~~lvn~~G~RF~~~~~~~-~el~~rd~v~~ai~~~~~~~~~-----~ 307 (540)
T 1chu_A 235 VANLEFNQFHPTALYHPQARNFLL-TEALRGEGAYLKRPDGTRFMPDFDER-GELAPRDIVARAIDHEMKRLGA-----D 307 (540)
T ss_dssp EECTTCEEEEEEEECSTTCTTCBC-CHHHHHTTCEEECTTSCBCGGGTCTT-GGGSCHHHHHHHHHHHHHHHTC-----S
T ss_pred CcChHHHhhcCeeecCCCCCccee-ehhhcCCceEEECCCCCCCcccCCcc-cccCcHHHHHHHHHHHHHhcCC-----c
Confidence 99999999999987543 4555 88899999999999999999999985 5899999999999999876532 3
Q ss_pred eEEEecCCCChhHHHHHhHHHHHHHHHHcCCCCCCCCeeccccccccccCcccCCCCceeeecCCCCCCcccCeeeeccc
Q 046556 351 HIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGDDPDEVVPGLMAAGEA 430 (633)
Q Consensus 351 ~v~~d~~~~~~~~l~~~~~~~~~~~~~~~G~d~~~~~i~v~p~~~~~~GGi~vd~~~~vl~~d~~~~~T~ipGLyAaGe~ 430 (633)
.+|+|.++++++.+.++++.+.+.+.. .|+||.++|+||.|++||++|||.||.+++ |+||||||||||
T Consensus 308 ~v~ld~~~~~~~~~~~~~~~i~~~~~~-~Gid~~~~~i~v~p~~h~t~GGi~vd~~~~----------t~I~GLyAaGE~ 376 (540)
T 1chu_A 308 CMFLDISHKPADFIRQHFPMIYEKLLG-LGIDLTQEPVPIVPAAHYTCGGVMVDDHGR----------TDVEGLYAIGEV 376 (540)
T ss_dssp CEEEECCSSCSHHHHHHCHHHHHHHHT-TTCCTTTSCEEEEEEEEEESCEEECCTTCB----------CSSBTEEECGGG
T ss_pred eEEEecccCCHHHHHHhhhhHHHHHHH-hCcCCCCCCeEeehHHheecCcEEECCCCC----------CccCCEEecccc
Confidence 599999999999999999999888874 699999999999999999999999999988 999999999999
Q ss_pred ccccccCCCCCChhhHHHHHHHHHHHHHHHHHHhCCCCCCCCCccchhhhHHHHHHHhhhcCCCCChHHHHHHHHHHhhc
Q 046556 431 ACASVHGANRLGANSLLDIVVFGRACANRVAEIQRPGEKQKPLENNAGERTVAWLDKIRNSNGSIPTSKIRLNMQRVMQN 510 (633)
Q Consensus 431 a~~g~~Ga~rlgg~~l~~a~~~G~~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~ 510 (633)
+|+++||+||+|||||++|+|||++||++|++++.........+.. ... .+........+.+++++||++||+
T Consensus 377 a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~l~~~m~~ 449 (540)
T 1chu_A 377 SYTGLHGANRMASNSLLECLVYGWSAAEDITRRMPYAHDISTLPPW-DES------RVENPDERVVIQHNWHELRLFMWD 449 (540)
T ss_dssp EECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC---CCCCCBCCC-CCC------CBCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCcCcchhHHHHHHHHHHHHHHHHHhcccccccccchhh-hhh------cccCcccccchHHHHHHHHHHHHH
Confidence 9889999999999999999999999999999876431110111100 000 000000012356789999999999
Q ss_pred cceEeeCHHHHHHHHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhCcCCccccccCCCCCCC
Q 046556 511 NAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRD 590 (633)
Q Consensus 511 ~~~~~r~~~~l~~~l~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~e~~~~l~~a~~~~~~al~R~ESRG~h~R~D~P~~d 590 (633)
|+||+|++++|++++++|++|++++.+..... ....+++|++||+++|+++++|||+|+||||+|||+|||++|
T Consensus 450 ~~gi~R~~~~L~~a~~~l~~l~~~~~~~~~~~------~~~~~~~e~~~~~~~a~~~~~~al~R~ESRG~h~r~D~p~~~ 523 (540)
T 1chu_A 450 YVGIVRTTKRLERALRRITMLQQEIDEYYAHF------RVSNNLLELRNLVQVAELIVRCAMMRKESRGLHFTLDYPELL 523 (540)
T ss_dssp HSSSSBCHHHHHHHHHHHHHHHHHHHHHHTTB------CCCHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCBTTCCSCC
T ss_pred hhCcccCHHHHHHHHHHHHHHHHHHHHHhhcc------cccHHHHHHHHHHHHHHHHHHHHHhCCCcceeeecccCCCcC
Confidence 99999999999999999999988764321110 112357899999999999999999999999999999999999
Q ss_pred cccccceEEE
Q 046556 591 DENWMKHTLG 600 (633)
Q Consensus 591 ~~~~~~~~~~ 600 (633)
|+ |+++++.
T Consensus 524 ~~-~~~~~~~ 532 (540)
T 1chu_A 524 TH-SGPSILS 532 (540)
T ss_dssp SS-CCCCEEC
T ss_pred hh-hhceEEc
Confidence 85 9999875
No 7
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=100.00 E-value=5.9e-78 Score=679.98 Aligned_cols=538 Identities=20% Similarity=0.269 Sum_probs=406.7
Q ss_pred CcccccccccEEEECCchHHHHHHHHHH---h-CCCcEEEEeecCCCCCcccccccceeee--cCCC----CcCCHHHHH
Q 046556 40 GYTIVDHTYDAVVVGAGGAGLRAAIGLS---E-HGFNTACITKLFPTRSHTVAAQGGINAA--LGNM----TEDDWRWHM 109 (633)
Q Consensus 40 ~~~~~~~~~DVlIIGgG~AGl~AA~~aa---~-~G~~V~vlEk~~~~~g~t~~~~Gg~~~~--~~~~----~~d~~~~~~ 109 (633)
.++.++.++||||||||+|||+||+.|+ + +|++|+||||....++ +..++|+.... ++.. ..++++.++
T Consensus 15 ~~~~~~~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s-~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~ 93 (643)
T 1jnr_A 15 EVPTEVVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERS-GAVAQGLSAINTYIDLTGRSERQNTLEDYV 93 (643)
T ss_dssp GSCEEEEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTC-STTTTCEEEESCCCCSSSSBSCCCCHHHHH
T ss_pred CCceeeccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCC-cceecccccccchhhHHHhcCCCCCHHHHH
Confidence 3445667899999999999999999999 6 8999999999876443 33444543332 2111 147888888
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHH
Q 046556 110 YDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHT 189 (633)
Q Consensus 110 ~d~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~ 189 (633)
.++...+.+++++++++.+++++++.++||+++|++|....+|.+... +... .. ..|..+...
T Consensus 94 ~~~~~~g~~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~--~~~~----------~~-----~~g~~~~~~ 156 (643)
T 1jnr_A 94 RYVTLDMMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVRE--GQWQ----------IM-----IHGESYKPI 156 (643)
T ss_dssp HHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBS--SSSC----------EE-----EEETTHHHH
T ss_pred HHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccCC--Cccc----------cC-----CCcHHHHHH
Confidence 899888899999999999999999999999999999987665543321 1100 00 013446667
Q ss_pred HHHHHHhC-CC-EEEEEEEEEEEEEccCC---cEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCCCCCCC---------C
Q 046556 190 LYGQAMKH-NT-QFFVEYFALDLIMNSDG---TCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSAT---------S 255 (633)
Q Consensus 190 l~~~a~~~-gv-~i~~~~~v~~L~~d~~g---~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~---------~ 255 (633)
|.+.+++. |+ ++++++.|++|+. +++ +|+||.+.+..+|+...|.|+.||+||||++..|.+++ +
T Consensus 157 l~~~~~~~~gv~~i~~~~~v~~L~~-~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~y~~~~~~~~~~~~~~ 235 (643)
T 1jnr_A 157 IAEAAKMAVGEENIYERVFIFELLK-DNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLLFRPRSTGEAAGRTWY 235 (643)
T ss_dssp HHHHHHHHHCGGGEECSEEEEEEEE-CTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCSS
T ss_pred HHHHHHhcCCCcEEEecCEEEEEEE-cCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcccccccCcccccccccccC
Confidence 77777777 99 9999999999999 455 99999988767888778999999999999999887654 3
Q ss_pred CCCCchHHHHHHHHcCCCccCccccccccccccCCcceeeeccccCCCcEEECCCCCccccccCCcccccc--------c
Q 046556 256 AHTCTGDGNAMVSRAGLPLEDLEFVQFHPTGIYGAGCLLLKVGSRGEGGILRNSEGERFMERYAPTAKDLA--------S 327 (633)
Q Consensus 256 ~~~~tGdg~~~a~~aGa~l~~~e~~~~~p~~~~~~~~~~~~~~~~g~g~~~vn~~G~rf~~~~~~~~~~l~--------~ 327 (633)
++.+||||+.||+++||.+.+||+ ||||+.+....... .......+++++|.+|+|||++|.|...+++ +
T Consensus 236 ~~~~tGdG~~mA~~aGa~l~~me~-qf~pt~~~~~~~~~-~~~~l~~g~ilvn~~G~RF~~e~~~~~~~~~~~~~~~~~~ 313 (643)
T 1jnr_A 236 AIFDTGSGYYMGLKAGAMLTQFEH-RFIPFRFKDGYGPV-GAWFLFFKCKAKNAYGEEYIKTRAAELEKYKPYGAAQPIP 313 (643)
T ss_dssp CTTCBSHHHHHHHHHTCCEESTTC-CBCCEEETTTCCCC-HHHHHTSCCCEECTTSCCHHHHTSGGGGGGTTGGGSSSCC
T ss_pred CCCCccHHHHHHHHhCCccCCchh-eeecccccCCCCCc-ccceecccceEECCCCCchhhccchhhhhHhhhcccCCCC
Confidence 678999999999999999999998 99998764321000 0011235789999999999999987653332 5
Q ss_pred hhHHhHHHHHHHHhcCCCCCCCCeEEEecC---------------CCChhHHHHHhH----HHHHHHHHHcCCCCCCCCe
Q 046556 328 RDVVSRSMTMEIREGRGVGPLKDHIYLHLN---------------HLPPDVLKERLP----GISETAAIFAGVDVTKEPI 388 (633)
Q Consensus 328 r~~~~~~i~~e~~~g~g~~~~~~~v~~d~~---------------~~~~~~l~~~~~----~~~~~~~~~~G~d~~~~~i 388 (633)
|++++++|+.++.+++++ +|+|.. +++++.+++.++ .++..+ ..|+||.++|+
T Consensus 314 rd~~~~~i~~e~~~g~g~------~~l~~~~~~~ela~~~gld~~~l~~~~~~~~l~~~~~~~~~~~--~~G~D~~~~~i 385 (643)
T 1jnr_A 314 TPLRNHQVMLEIMDGNQP------IYMHTEEALAELAGGDKKKLKHIYEEAFEDFLDMTVSQALLWA--CQNIDPQEQPS 385 (643)
T ss_dssp HHHHHHHHHHHHHTTCCC------EEECHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCHHHHHHHH--HTTCCTTTSCE
T ss_pred chhhHHHHHHHHhcCCCC------ceeeecccHHHHHHHhccChhhhhHHHHHHHHHHhHHHHHHHH--hcCCCcccCcc
Confidence 889999999999987654 788743 222222223332 233322 27999999999
Q ss_pred ecccccccccc------CcccCCCCceeeec-------CCCCCCcccCeeeecccccccccCCCCCChhhHHHHHHHHHH
Q 046556 389 PVLPTVHYNMG------GIPTNHHGEVVTIK-------GDDPDEVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRA 455 (633)
Q Consensus 389 ~v~p~~~~~~G------Gi~vd~~~~vl~~d-------~~~~~T~ipGLyAaGe~a~~g~~Ga~rlgg~~l~~a~~~G~~ 455 (633)
||.|++||+|| ||.||.+++||+.| ..+.+|+||||||||||+|++ .||++||||++ |++
T Consensus 386 pv~p~~hy~~G~~~t~gGi~~d~~~~vl~~~~~~~v~~~~~~~t~I~GLyAaGe~a~~~---~~r~~~~sl~~----G~~ 458 (643)
T 1jnr_A 386 EAAPAEPYIMGSHSGEAGFWVCGPEDLMPEEYAKLFPLKYNRMTTVKGLFAIGDCAGAN---PHKFSSGSFTE----GRI 458 (643)
T ss_dssp EEEECCCBBCSSSSCCCEECCCCCTTTCCHHHHTTCSSCCTTBCSSBTEEECGGGBCSC---CCCHHHHHHHH----HHH
T ss_pred cccCCCCccccccccccceeecCccccccccccccccccccCCceeCCEEeeecccccc---ccccchhHHHH----HHH
Confidence 99999999999 89999999988753 122459999999999998654 36888887655 566
Q ss_pred HHHHHHHHhCCCCCCCCCccchhh----hHHHHHHHhhh----------cCCCCChHHHHHHHHHHhhccce----EeeC
Q 046556 456 CANRVAEIQRPGEKQKPLENNAGE----RTVAWLDKIRN----------SNGSIPTSKIRLNMQRVMQNNAA----VFRT 517 (633)
Q Consensus 456 Ag~~aa~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----------~~~~~~~~~~~~~l~~~m~~~~~----~~r~ 517 (633)
||++|++++.......+.+..... .....+..+.. .....++.+++.+||++||+|+| ++|+
T Consensus 459 ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~M~~~~g~i~~~~R~ 538 (643)
T 1jnr_A 459 AAKAAVRFILEQKPNPEIDDAVVEELKKKAYAPMERFMQYKDLSTADDVNPEYILPWQGLVRLQKIMDEYAAGIATIYKT 538 (643)
T ss_dssp HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHGGGCSSTTCCTTCBCHHHHHHHHHHHHHHHTTCGGGTTEE
T ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHHHHhHHHHhhhccccccccccCcCCCCHHHHHHHHHHHHHHHhCCCcceeec
Confidence 666655554221111122111111 11122222211 01235789999999999999999 5687
Q ss_pred HH-HHHHHHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhCcCCc--cccccCCCCCCCcccc
Q 046556 518 QE-TLEEGCQLIDKAWESFHDVKLTDRSLIWNTDLIETIELENLLINACITMHSAEARKESR--GAHAREDFTKRDDENW 594 (633)
Q Consensus 518 ~~-~l~~~l~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~e~~~~l~~a~~~~~~al~R~ESR--G~h~R~D~P~~d~~~~ 594 (633)
++ +|++|+++|++|+++++++.+.+. ++|++++|++|||++|++|++|||+||||| |+|||+|||++||++|
T Consensus 539 ~~~~L~~al~~l~~l~~~~~~~~~~~~-----~~l~~~~e~~n~l~~a~~i~~aAl~R~ESR~~G~H~R~D~P~~d~~~~ 613 (643)
T 1jnr_A 539 NEKMLQRALELLAFLKEDLEKLAARDL-----HELMRAWELVHRVWTAEAHVRHMLFRKETRWPGYYYRTDYPELNDEEW 613 (643)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTBCCSSH-----HHHHHHHHHHHHHHHHHHHHHHHHHCCSCSSTTTCEETTSCSCCTTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHhccccccCCceecccCCccChHHH
Confidence 55 999999999999998888877763 899999999999999999999999999999 9999999999999999
Q ss_pred cceEEEEee--CCeeEEeeeeccccc
Q 046556 595 MKHTLGYWE--NEKVRLDYRPVHMNT 618 (633)
Q Consensus 595 ~~~~~~~~~--~g~~~~~~~~~~~~~ 618 (633)
+++++++++ +|+++++++||...+
T Consensus 614 ~~~~~~~~~~~~~~~~~~~~pv~~~~ 639 (643)
T 1jnr_A 614 KCFVCSKYDAEKDEWTFEKVPYVQVI 639 (643)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCCCB
T ss_pred HHHHhhhcccCCCceEEEEeecccCC
Confidence 999998874 789999999997543
No 8
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=100.00 E-value=1e-73 Score=623.72 Aligned_cols=468 Identities=30% Similarity=0.455 Sum_probs=393.9
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHHHHHHH
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYM 128 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v~~~ 128 (633)
||||||||+||++||+.|++.|++|+||||. ..+|++.+++||+.+... ..++++.++.++++.+.++++++.++.+
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~--~~d~~~~~~~d~l~~g~~~~d~~~v~~~ 77 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVG--SDDSPELHAQDTIRVGDGLCDVKTVNYV 77 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCS--TTCCHHHHHHHHHHHHTTCSCHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCC--CCCCHHHHHHHHHHhcCCcCCHHHHHHH
Confidence 8999999999999999999999999999999 777888889999987664 3678899999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCCEEEEEEEEE
Q 046556 129 CREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFAL 208 (633)
Q Consensus 129 ~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv~i~~~~~v~ 208 (633)
++++++.++|+.++|++|... ...+++++. +|.++..+.++..+...|.+++++.|+++++++.|
T Consensus 78 ~~~~~~~i~~l~~~Gv~~~~~------~~~~~g~~~--------~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v- 142 (472)
T 2e5v_A 78 TSEAKNVIETFESWGFEFEED------LRLEGGHTK--------RRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV- 142 (472)
T ss_dssp HHHHHHHHHHHHHTTCCCCSS------CBCCTTCSS--------CCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-
T ss_pred HHHHHHHHHHHHHcCCCCCcc------cccccCcCc--------CcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-
Confidence 999999999999999998753 122333332 35666667788999999999998889999999999
Q ss_pred EEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCCCCCCCCCCCCchHHHHHHHHcCCCccCcccccccccccc
Q 046556 209 DLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVSRAGLPLEDLEFVQFHPTGIY 288 (633)
Q Consensus 209 ~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e~~~~~p~~~~ 288 (633)
+|+. ++++|+|+.+.+ .+| .+.||.||+|||+++..|..+++++.++|||+.|++++|+.+.+|||+|+||+.+.
T Consensus 143 ~l~~-~~~~v~Gv~v~~-~~g---~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~ 217 (472)
T 2e5v_A 143 EIRV-KDGKVTGFVTEK-RGL---VEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTS 217 (472)
T ss_dssp EEEE-ETTEEEEEEETT-TEE---ECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEEC
T ss_pred EEEE-eCCEEEEEEEEe-CCC---eEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEc
Confidence 9988 578999988743 233 36799999999999999888888889999999999999999999999999998654
Q ss_pred CC--cceeeeccccCCCcEEECCCCCccccccCCccccccchhHHhHHHHHHHHhcCCCCCCCCeEEEecCCCChhHHHH
Q 046556 289 GA--GCLLLKVGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKE 366 (633)
Q Consensus 289 ~~--~~~~~~~~~~g~g~~~vn~~G~rf~~~~~~~~~~l~~r~~~~~~i~~e~~~g~g~~~~~~~v~~d~~~~~~~~l~~ 366 (633)
.. ++++ .+.+++.|++++|.+|+||+++|+|.. ++.+|+++++.+..++.++. .+|+|.++++. +.+
T Consensus 218 ~ggg~~~~-ae~~~~~G~~~v~~~g~rf~~~~~~~~-el~~rd~v~~~i~~~~~~~~-------~v~ld~~~~~~--~~~ 286 (472)
T 2e5v_A 218 LDGEVFLL-TETLRGEGAQIINENGERFLFNYDKRG-ELAPRDILSRAIYIEMLKGH-------KVFIDLSKIED--FER 286 (472)
T ss_dssp GGGCCEEC-CTHHHHTTCEEEETTCCCGGGGTCTTG-GGSCHHHHHHHHHHHHHHTC-------CEEEECTTCTT--HHH
T ss_pred cCCCceee-ehhhcCCceEEECCCCCCCCccCCccc-CcCchhHHHHHHHHHHHhCC-------cEEEeccchHH--HHH
Confidence 21 3444 778888899999999999999998864 88999999999999987753 28999988764 667
Q ss_pred HhHHHHHHHHHHcCCCCCCCCeeccccccccccCcccCCCCceeeecCCCCCCcccCeeeecccccccccCCCCCChhhH
Q 046556 367 RLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGDDPDEVVPGLMAAGEAACASVHGANRLGANSL 446 (633)
Q Consensus 367 ~~~~~~~~~~~~~G~d~~~~~i~v~p~~~~~~GGi~vd~~~~vl~~d~~~~~T~ipGLyAaGe~a~~g~~Ga~rlgg~~l 446 (633)
+++.+...+. ..|+||. +++++.|..|+++|||.||.+++ |+||||||||||+|.++||+||++|+++
T Consensus 287 ~~~~~~~~~~-~~G~dp~-~~i~v~p~~~~~~GGI~vd~~~~----------t~ipgLyAaGd~a~~~~hg~~rl~~~sl 354 (472)
T 2e5v_A 287 KFPVVAKYLA-RHGHNYK-VKIPIFPAAHFVDGGIRVNIRGE----------SNIVNLYAIGEVSDSGLHGANRLASNSL 354 (472)
T ss_dssp HCHHHHHHHH-HTTCCTT-SCEECEEEEEEESCEEECCTTCB----------CSSBTEEECGGGEECSSSTTSCCTTHHH
T ss_pred HhHHHHHHHH-HhCcCcc-cceEeehhhceeCCCeEECCCCc----------cccCCEEecchhcccccCCCCCCCcccH
Confidence 7776655544 3799999 99999999999999999999988 9999999999998658999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCCccchhhhHHHHHHHhhhcCCCCChHHHHHHHHHHhhccceEeeCHHHHHHHHH
Q 046556 447 LDIVVFGRACANRVAEIQRPGEKQKPLENNAGERTVAWLDKIRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCQ 526 (633)
Q Consensus 447 ~~a~~~G~~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~~~~r~~~~l~~~l~ 526 (633)
.+|+++|++||++++++... .....+. .....+..++.+++.+||++||+|+|++|++++|+++++
T Consensus 355 ~~~~v~G~~a~~~~a~~~~~--~~~~~~~------------~~~~~~~~~~~~~~~~l~~~m~~~~g~~r~~~~l~~~~~ 420 (472)
T 2e5v_A 355 LEGLVFGINLPRYVDSSWEG--ISTDDGI------------VHSVRISGNKTLSLKEIRRINWENVGIIRNEEKLVKAIN 420 (472)
T ss_dssp HHHHHHHHHGGGTTTSCCCC--CCCTTEE------------EEEECCCCCCCCCHHHHHHHHHHHSSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccc--chhhhhh------------cccccccCChHHHHHHHHHHHHHhcCcccCHHHHHHHHH
Confidence 99999999999998754321 0001100 001123356778899999999999999999999999999
Q ss_pred HHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhCcCCccccccCCCCCCCcccccceEEEEe
Q 046556 527 LIDKAWESFHDVKLTDRSLIWNTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYW 602 (633)
Q Consensus 527 ~l~~l~~~~~~~~~~~~~~~~~~~l~~~~e~~~~l~~a~~~~~~al~R~ESRG~h~R~D~P~~d~~~~~~~~~~~~ 602 (633)
+|++|++ +|+++|+++++|||+||||||+|||+|||++||+ |.+++++.+
T Consensus 421 ~~~~~~~-------------------------~~~~~a~~~~~~al~R~esrG~h~r~d~p~~~~~-~~~~~~~~~ 470 (472)
T 2e5v_A 421 TYSSSTQ-------------------------NEAIISYLTALAAEIRKESRGNHFREDYPYKDPN-WEKRIYFKL 470 (472)
T ss_dssp HHTTCCC-------------------------HHHHHHHHHHHHHHHCCSCBTTBCBTTBCSCCGG-GCSEEEEEE
T ss_pred HHHHHHH-------------------------HHHHHHHHHHHHHHhccccccceecccCCCcChh-hhceEEEEe
Confidence 9976532 2899999999999999999999999999999985 999987654
No 9
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=100.00 E-value=1.3e-52 Score=469.17 Aligned_cols=380 Identities=30% Similarity=0.492 Sum_probs=308.5
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCC-----CCcCCHHHHHHHHHhcCCCCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGN-----MTEDDWRWHMYDTVKGSDWLG 120 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~-----~~~d~~~~~~~d~~~~~~~~~ 120 (633)
.++||||||||+|||+||+.|+++|++|+||||....+|.+..+.|+++..... ...++++.++.++++.+.+..
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIN 204 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 468999999999999999999999999999999988878888888887653321 124778888899998888899
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccC--CchHHHHHHHHHHHHhCC
Q 046556 121 DQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAAD--RTGHALLHTLYGQAMKHN 198 (633)
Q Consensus 121 ~~~~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~--~~g~~l~~~l~~~a~~~g 198 (633)
++++++.+++.+++.++||.++|++|... ..++++. ..+.....+ ..+..+...|.+.+++.|
T Consensus 205 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------~~~~g~~--------~~r~~~~~~g~~~g~~l~~~L~~~~~~~g 269 (571)
T 1y0p_A 205 DPALVKVLSSHSKDSVDWMTAMGADLTDV-------GMMGGAS--------VNRAHRPTGGAGVGAHVVQVLYDNAVKRN 269 (571)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEE-------ECCTTCS--------SCCEEESTTTCCHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCCCccC-------cccCCcC--------CCeeEecCCCCCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999998531 1122222 124443333 467889999999999999
Q ss_pred CEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCC------CC------CCCCCCCCchHHHHH
Q 046556 199 TQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRA------YF------SATSAHTCTGDGNAM 266 (633)
Q Consensus 199 v~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~------~~------~~~~~~~~tGdg~~~ 266 (633)
++|+++++|++|+.+++++|+||++.+ .+|+...|.|+.||+|||+++.+ |. .+++++.+||||+.|
T Consensus 270 v~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg~~~n~~~~~~~~p~~~~~~~~~~~~~tGdg~~~ 348 (571)
T 1y0p_A 270 IDLRMNTRGIEVLKDDKGTVKGILVKG-MYKGYYWVKADAVILATGGFAKNNERVAKLDPSLKGFISTNQPGAVGDGLDV 348 (571)
T ss_dssp CEEESSEEEEEEEECTTSCEEEEEEEE-TTTEEEEEECSEEEECCCCCTTCHHHHHHHCGGGTTCCBCSCTTCSSHHHHH
T ss_pred CEEEeCCEeeEeEEcCCCeEEEEEEEe-CCCcEEEEECCeEEEeCCCcccCHHHHHHhCccccCCcccCCCCCchHHHHH
Confidence 999999999999984338999999875 47877789999999999999862 32 455678999999999
Q ss_pred HHHcCCCccCccccccccccccCCcceeeeccccCCCcEEECCCCCccccccCCccccccchhHHhHHHHHHHHhcCCCC
Q 046556 267 VSRAGLPLEDLEFVQFHPTGIYGAGCLLLKVGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVG 346 (633)
Q Consensus 267 a~~aGa~l~~~e~~~~~p~~~~~~~~~~~~~~~~g~g~~~vn~~G~rf~~~~~~~~~~l~~r~~~~~~i~~e~~~g~g~~ 346 (633)
|+++|+.+.+|+|+|+||+.+...+.+. .+.+++.++++||.+|+||++| +.+|+++++++..+.. +
T Consensus 349 a~~~Ga~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~g~i~vn~~G~RF~~E-------~~~~~~~~~a~~~~~~---~-- 415 (571)
T 1y0p_A 349 AENAGGALKDMQYIQAHPTLSVKGGVMV-TEAVRGNGAILVNREGKRFVNE-------ITTRDKASAAILAQTG---K-- 415 (571)
T ss_dssp HHHTTCCEECTTCEEEEEEEETTTCSBC-CTHHHHTTCEEECTTSCCCSCT-------TSCHHHHHHHHHTSGG---G--
T ss_pred HHHcCCcEeCCcceeecCcccCCCCcee-eecccCCceEEECCCCCCCcCC-------CCcHhHHHHHHHhCcC---C--
Confidence 9999999999999999999876655555 6667778899999999999985 4567777777653311 0
Q ss_pred CCCCeEEE--e------------------------------cCCCChhHHHHHhHHHHHHHHHHcCCCCC----------
Q 046556 347 PLKDHIYL--H------------------------------LNHLPPDVLKERLPGISETAAIFAGVDVT---------- 384 (633)
Q Consensus 347 ~~~~~v~~--d------------------------------~~~~~~~~l~~~~~~~~~~~~~~~G~d~~---------- 384 (633)
..|+ | ..+++++.|++++..||+.+. .|.|+.
T Consensus 416 ----~~~~i~d~~~~~~~~~~~~~~~~g~~~~~~tl~ela~~~gi~~~~l~~tv~~yn~~~~--~g~D~~f~k~~~~~~i 489 (571)
T 1y0p_A 416 ----SAYLIFDDSVRKSLSKIDKYIGLGVAPTADSLVKLGKMEGIDGKALTETVARYNSLVS--SGKDTDFERPNLPRAL 489 (571)
T ss_dssp ----CEEEEEEHHHHHHCTTHHHHHHHTCCCEESSHHHHHHHHTSCHHHHHHHHHHHHHHHH--HTCCTTTCCSCCCCCS
T ss_pred ----CEEEEEChHHHhhhhhHHHHhhCCeEEEeCCHHHHHHHhCcCHHHHHHHHHHHHHHHH--cCCCcccCCCCCCCcC
Confidence 1221 1 124677788888899998876 577742
Q ss_pred -CCC---eeccccccccccCcccCCCCceeeecCCCCCCcccCeeeecccccccccCCCCCChhhHHHHHHHHHHHHHHH
Q 046556 385 -KEP---IPVLPTVHYNMGGIPTNHHGEVVTIKGDDPDEVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRV 460 (633)
Q Consensus 385 -~~~---i~v~p~~~~~~GGi~vd~~~~vl~~d~~~~~T~ipGLyAaGe~a~~g~~Ga~rlgg~~l~~a~~~G~~Ag~~a 460 (633)
+.| +++.|..|+|+|||+||+++|||+. ++|+|||||||||++ +|+||+||++|++|++|+|||++||++|
T Consensus 490 ~~~Pfya~~~~p~~~~t~GGl~id~~~~vl~~----~g~~I~GLyAaGe~~-~g~~g~~~l~g~sl~~~~~fGr~Ag~~a 564 (571)
T 1y0p_A 490 NEGNYYAIEVTPGVHHTMGGVMIDTKAEVMNA----KKQVIPGLYGAGEVT-GGVHGANRLGGNAISDIITFGRLAGEEA 564 (571)
T ss_dssp CSSCEEEEEEEEEEEEECCEEEBCTTCEEECT----TSCEEEEEEECSTTE-ESSSTTSCCTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEeeeeeEecCCeEECCCceEECC----CCCCcCCcEeceEcC-CCCcCCCCCchHhHHHHHHHHHHHHHHH
Confidence 345 8899999999999999999999986 559999999999998 6899999999999999999999999999
Q ss_pred HHHhC
Q 046556 461 AEIQR 465 (633)
Q Consensus 461 a~~~~ 465 (633)
+++++
T Consensus 565 a~~~~ 569 (571)
T 1y0p_A 565 AKYSK 569 (571)
T ss_dssp HHHC-
T ss_pred HHHhh
Confidence 98754
No 10
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=100.00 E-value=4.3e-52 Score=464.19 Aligned_cols=380 Identities=28% Similarity=0.456 Sum_probs=309.9
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCC-----CCcCCHHHHHHHHHhcCCCC
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGN-----MTEDDWRWHMYDTVKGSDWL 119 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~-----~~~d~~~~~~~d~~~~~~~~ 119 (633)
+.++||||||+|++||+||+.|+++|++|+||||....++.+..+.|+++..... ...++++.++.++++.+.+.
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~ 198 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQ 198 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 3578999999999999999999999999999999988888888888888653321 13577888899999988899
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccC--CchHHHHHHHHHHHHhC
Q 046556 120 GDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAAD--RTGHALLHTLYGQAMKH 197 (633)
Q Consensus 120 ~~~~~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~--~~g~~l~~~l~~~a~~~ 197 (633)
.+++++..+++.+++.++||.++|++|... ..++++.. ++.....+ ..+..+...|.+.+++.
T Consensus 199 ~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~-------~~~~g~~~--------~r~~~~~~~~~~~~~l~~~L~~~~~~~ 263 (566)
T 1qo8_A 199 NDIKLVTILAEQSADGVQWLESLGANLDDL-------KRSGGARV--------DRTHRPHGGKSSGPEIIDTLRKAAKEQ 263 (566)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEE-------ECCTTCSS--------CCEEECSSSSCHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHhccHHHHHHHHhcCCccccc-------cccCCCCC--------CceeecCCCCCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999998531 11222221 23333333 35788999999999999
Q ss_pred CCEEEEEEEEEEEEEccC-CcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCC------CC------CCCCCCCCchHHH
Q 046556 198 NTQFFVEYFALDLIMNSD-GTCQGVIALNMEDGTLHRFRAASTILATGGYGRA------YF------SATSAHTCTGDGN 264 (633)
Q Consensus 198 gv~i~~~~~v~~L~~d~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~------~~------~~~~~~~~tGdg~ 264 (633)
|++|+++++|++|+. ++ ++|+||.+.+ .+|+...|+||.||+||||++.+ |. .+++++.+||||+
T Consensus 264 gv~i~~~~~v~~l~~-~~~g~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg~s~~~~~~~~~~p~~~~~~~~~~~~~tGdg~ 341 (566)
T 1qo8_A 264 GIDTRLNSRVVKLVV-NDDHSVVGAVVHG-KHTGYYMIGAKSVVLATGGYGMNKEMIAYYRPTMKDMTSSNNITATGDGV 341 (566)
T ss_dssp TCCEECSEEEEEEEE-CTTSBEEEEEEEE-TTTEEEEEEEEEEEECCCCCTTCHHHHHHHCGGGTTCEECSCTTCSCHHH
T ss_pred CCEEEeCCEEEEEEE-CCCCcEEEEEEEe-CCCcEEEEEcCEEEEecCCcccCHHHHHHhCccccCCcccCCCCCCcHHH
Confidence 999999999999999 56 8999999875 57877789999999999999975 32 2456789999999
Q ss_pred HHHHHcCCCccCccccccccccccCCcceeeeccccCCCcEEECCCCCccccccCCccccccchhHHhHHHHHHHHhcCC
Q 046556 265 AMVSRAGLPLEDLEFVQFHPTGIYGAGCLLLKVGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRG 344 (633)
Q Consensus 265 ~~a~~aGa~l~~~e~~~~~p~~~~~~~~~~~~~~~~g~g~~~vn~~G~rf~~~~~~~~~~l~~r~~~~~~i~~e~~~g~g 344 (633)
.||+++|+.+.+|+++|+||+.....++++ ++.+++.++++||.+|+||++|. .+|+.+.+++..+ ..+
T Consensus 342 ~~a~~~Ga~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~g~i~vn~~G~Rf~~E~-------~~~~~~~~~~~~~-~~~-- 410 (566)
T 1qo8_A 342 LMAKEIGASMTDIDWVQAHPTVGKDSRILI-SETVRGVGAVMVNKDGNRFISEL-------TTRDKASDAILKQ-PGQ-- 410 (566)
T ss_dssp HHHHHTTBCEESTTCEEEEEEEESSSCSBC-CTHHHHTTCEEECTTSCCCSCTT-------SCHHHHHHHHHTS-GGG--
T ss_pred HHHHHcCCeEecCcceeecccccCCccccc-hhhhccCCeEEECCCCCCccCCC-------CCHHHHHHHHHhC-CCC--
Confidence 999999999999999999998765555555 67777889999999999999854 4566666665532 010
Q ss_pred CCCCCCeEEE--e------------------------------cCCCChhHHHHHhHHHHHHHHHHcCCCC---------
Q 046556 345 VGPLKDHIYL--H------------------------------LNHLPPDVLKERLPGISETAAIFAGVDV--------- 383 (633)
Q Consensus 345 ~~~~~~~v~~--d------------------------------~~~~~~~~l~~~~~~~~~~~~~~~G~d~--------- 383 (633)
..|+ | ..+++++.|.+++..||+.+. .|+|+
T Consensus 411 ------~~~~i~d~~~~~~~~~~~~~~~~~~~~~~~tl~eLa~~~gi~~~~l~~tv~~yn~~~~--~g~d~~fg~~~~~~ 482 (566)
T 1qo8_A 411 ------FAWIIFDNQLYKKAKMVRGYDHLEMLYKGDTVEQLAKSTGMKVADLAKTVSDYNGYVA--SGKDTAFGRADMPL 482 (566)
T ss_dssp ------CEEEEEEHHHHHHCHHHHHHHHTTCCEEESSHHHHHHHTTCCHHHHHHHHHHHHHHHH--HSCCTTTCCSCCCC
T ss_pred ------cEEEEEChHHhhhhhhhHHHhhcCcEEEeCCHHHHHHHhCCCHHHHHHHHHHHHHHHh--cCCCcccCCCCCCC
Confidence 1121 1 246788889999999998886 57764
Q ss_pred --CCCC---eeccccccccccCcccCCCCceeeecCCCCCCcccCeeeecccccccccCCCCCChhhHHHHHHHHHHHHH
Q 046556 384 --TKEP---IPVLPTVHYNMGGIPTNHHGEVVTIKGDDPDEVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACAN 458 (633)
Q Consensus 384 --~~~~---i~v~p~~~~~~GGi~vd~~~~vl~~d~~~~~T~ipGLyAaGe~a~~g~~Ga~rlgg~~l~~a~~~G~~Ag~ 458 (633)
.+.| +++.|..|+|+|||+||+++|||+. ++|+|||||||||++ +|+||+||++|++|++|+|||++||+
T Consensus 483 ~i~~~Pfya~~~~p~~~~t~GGl~vd~~~~vl~~----~g~~I~GLyAaGe~~-~g~~g~~~~~g~sl~~~~v~Gr~Ag~ 557 (566)
T 1qo8_A 483 NMTQSPYYAVKVAPGIHHTMGGVAINTTASVLDL----QSKPIDGLFAAGEVT-GGVHGYNRLGGNAIADTVVFGRIAGD 557 (566)
T ss_dssp CSCSSSEEEEEEEEEEEEECCEECBCTTCEEEBT----TSCEEEEEEECSTTB-CSSSTTCCCTTHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEEEecccceecccEEECCCCeEECC----CCCEeCCEEeccccc-CCCCCCCCCchhhHHHHHHHHHHHHH
Confidence 2345 8899999999999999999999986 569999999999998 69999999999999999999999999
Q ss_pred HHHHHhC
Q 046556 459 RVAEIQR 465 (633)
Q Consensus 459 ~aa~~~~ 465 (633)
+|+++++
T Consensus 558 ~aa~~~~ 564 (566)
T 1qo8_A 558 NAAKHAL 564 (566)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9998764
No 11
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=100.00 E-value=4.5e-52 Score=463.70 Aligned_cols=379 Identities=30% Similarity=0.491 Sum_probs=309.3
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCC-----CcCCHHHHHHHHHhcCCCCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNM-----TEDDWRWHMYDTVKGSDWLG 120 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~-----~~d~~~~~~~d~~~~~~~~~ 120 (633)
.++||+|||+|++|++||+.|+++|.+|+|+||....+|.+..+.|+++...... ..++++.++.++++.+.+..
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999999999999888888888888886544321 24677888899999888999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccC--CchHHHHHHHHHHHHhCC
Q 046556 121 DQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAAD--RTGHALLHTLYGQAMKHN 198 (633)
Q Consensus 121 ~~~~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~--~~g~~l~~~l~~~a~~~g 198 (633)
++++++.+++.+++.++||.++|++|... ..++++.. +|.....+ ..+..+...|.+.+++.|
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~-------~~~gg~~~--------~r~~~~~~~~~~g~~l~~~L~~~~~~~g 269 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTSMGADMTDV-------GRMGGASV--------NRSHRPTGGAGVGAHVAQVLWDNAVKRG 269 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHTCCCCEE-------ECCTTCSS--------CCEEESTTTCCHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCccccc-------cccCCCcC--------CeeEecCCCCCCHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999998531 11233322 24443333 347889999999999999
Q ss_pred CEEEEEEEEEEEEEccC-CcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCC------C------CCCCCCCCCchHHHH
Q 046556 199 TQFFVEYFALDLIMNSD-GTCQGVIALNMEDGTLHRFRAASTILATGGYGRA------Y------FSATSAHTCTGDGNA 265 (633)
Q Consensus 199 v~i~~~~~v~~L~~d~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~------~------~~~~~~~~~tGdg~~ 265 (633)
++|+++++|++|+. ++ ++|+||.+.+ .+|+...|.||.||+||||++.+ | ..+++++.+||||+.
T Consensus 270 v~i~~~t~v~~l~~-~~~g~v~GV~~~~-~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~p~~~~~~~~~~~~~tGdgi~ 347 (572)
T 1d4d_A 270 TDIRLNSRVVRILE-DASGKVTGVLVKG-EYTGYYVIKADAVVIAAGGFAKNNERVSKYDPKLKGFKATNHPGATGDGLD 347 (572)
T ss_dssp CEEESSEEEEEEEE-C--CCEEEEEEEE-TTTEEEEEECSEEEECCCCCTTCHHHHHHHCGGGTTCCBSSCTTCSSHHHH
T ss_pred CeEEecCEEEEEEE-CCCCeEEEEEEEe-CCCcEEEEEcCEEEEeCCCCccCHHHHHHhCccccCCCccCCCCCccHHHH
Confidence 99999999999998 55 8999999875 47877789999999999999964 2 235677899999999
Q ss_pred HHHHcCCCccCccccccccccccCCcceeeeccccCCCcEEECCCCCccccccCCccccccchhHHhHHHHHHHHhcCCC
Q 046556 266 MVSRAGLPLEDLEFVQFHPTGIYGAGCLLLKVGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGV 345 (633)
Q Consensus 266 ~a~~aGa~l~~~e~~~~~p~~~~~~~~~~~~~~~~g~g~~~vn~~G~rf~~~~~~~~~~l~~r~~~~~~i~~e~~~g~g~ 345 (633)
||+++|+.+.+|+++|+||+.....++++ ++..++.++++||.+|+||++|. .+|+.+++++..+ ..+
T Consensus 348 ~a~~~Ga~~~~~~~~q~~p~~~~~~~~l~-~~~~~~~g~i~vn~~G~RF~~E~-------~~~~~~~~ai~~~-~~~--- 415 (572)
T 1d4d_A 348 VALQAGAATRDLQYIQAHPTYSPAGGVMI-TEAVRGNGAIVVNREGNRFMNEI-------TTRDKASAAILQQ-KGE--- 415 (572)
T ss_dssp HHHHTTBCEECTTCEEEEEEEETTTTEEC-CHHHHHTTCEEECTTSCCCSCTT-------SCHHHHHHHHHTS-GGG---
T ss_pred HHHHcCCeEeCCCceeEecccCCCccccc-hhhhccCceEEECCCCCCccCCC-------CCHhHHHHHHHhC-cCC---
Confidence 99999999999999999998765555555 67778889999999999999854 4677777777642 111
Q ss_pred CCCCCeEEE--e------------------------------cCCCChhHHHHHhHHHHHHHHHHcCCCC----------
Q 046556 346 GPLKDHIYL--H------------------------------LNHLPPDVLKERLPGISETAAIFAGVDV---------- 383 (633)
Q Consensus 346 ~~~~~~v~~--d------------------------------~~~~~~~~l~~~~~~~~~~~~~~~G~d~---------- 383 (633)
..|+ | ..+++++.|+++++.||+.+. .|+|+
T Consensus 416 -----~~~~i~d~~~~~~~~~~~~~~~~~~~~~~~ti~ela~~~gi~~~~l~~tv~~yn~~~~--~g~D~~fg~~~~~~~ 488 (572)
T 1d4d_A 416 -----SAYLVFDDSIRKSLKAIEGYVHLNIVKEGKTIEELAKQIDVPAAELAKTVTAYNGFVK--SGKDAQFERPDLPRE 488 (572)
T ss_dssp -----CEEEEECHHHHTTCTHHHHHHHTTCCEEESSHHHHHHHHTCCHHHHHHHHHHHHHHC---CCCCTTTCCSCCCCC
T ss_pred -----eEEEEEChHHhhhccchHHHhhCCcEEEeCCHHHHHHHcCCCHHHHHHHHHHHHHHHh--cCCCcccCCCCCCCc
Confidence 1222 1 125677888889999988775 67764
Q ss_pred -CCCC---eeccccccccccCcccCCCCceeeecCCCCC-CcccCeeeecccccccccCCCCCChhhHHHHHHHHHHHHH
Q 046556 384 -TKEP---IPVLPTVHYNMGGIPTNHHGEVVTIKGDDPD-EVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACAN 458 (633)
Q Consensus 384 -~~~~---i~v~p~~~~~~GGi~vd~~~~vl~~d~~~~~-T~ipGLyAaGe~a~~g~~Ga~rlgg~~l~~a~~~G~~Ag~ 458 (633)
.+.| +++.|..|+|+|||+||.++|||+. ++ |+|||||||||++ +|+||+||+||++|++|+|||++||+
T Consensus 489 i~~~Pfya~~v~p~~~~t~GGl~id~~~~Vl~~----~g~~~I~GLyAaGe~~-~g~~g~~~l~g~sl~~~~vfGr~Ag~ 563 (572)
T 1d4d_A 489 LVVAPFYALEIAPAVHHTMGGLVIDTKAEVKSE----KTAKPITGLYAAGEVT-GGVHGANRLGGNAISDIVTYGRIAGA 563 (572)
T ss_dssp CCSSSEEEEEEEEEEEEECCEEEBCTTCEEEBS----SSSSEEEEEEECSTTE-ESTTTTSCCTTHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEEcccceeCCCeEECCCCeEEcC----CCCcccCCeeECeecc-cCCCCCCCCchHhHHHHHHHHHHHHH
Confidence 2446 8999999999999999999999986 56 8999999999998 69999999999999999999999999
Q ss_pred HHHHHhC
Q 046556 459 RVAEIQR 465 (633)
Q Consensus 459 ~aa~~~~ 465 (633)
+|+++++
T Consensus 564 ~aa~~~~ 570 (572)
T 1d4d_A 564 SAAKFAK 570 (572)
T ss_dssp HHHHTTC
T ss_pred HHHHHhh
Confidence 9998754
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=100.00 E-value=8e-50 Score=440.51 Aligned_cols=400 Identities=22% Similarity=0.245 Sum_probs=290.3
Q ss_pred cccccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCC------CCcCCHHHHHHHHHhcC
Q 046556 43 IVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGN------MTEDDWRWHMYDTVKGS 116 (633)
Q Consensus 43 ~~~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~------~~~d~~~~~~~d~~~~~ 116 (633)
.++.++||||||+|+|||+||+.|+++|++|+||||....+|++..+.|++....+. ...++++.++.++...+
T Consensus 37 ~~~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~~s~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~~ 116 (510)
T 4at0_A 37 EWDYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATALAGGFIYLGGGTPLQKACGFDDSPENMKTFMMAAL 116 (510)
T ss_dssp CCSEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGSCCCEECCSSCHHHHHTTCCCCHHHHHHHHHHHS
T ss_pred ccCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcchhcCcceecCCCCHHHHHhCCCCCHHHHHHHHHHHh
Confidence 356789999999999999999999999999999999988888887777665432111 13578888888988889
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccccC-----------CCcccccccCCcccccCCCCccceeEE-------c
Q 046556 117 DWLGDQDAIQYMCREAPKAVIELENYGLPFSRTE-----------DGKIYQRAFGGQSLDFGKGGQAYRCAC-------A 178 (633)
Q Consensus 117 ~~~~~~~~v~~~~~~~~~~~~~l~~~Gv~f~~~~-----------~g~~~~~~~gg~~~~~~~g~~~~r~~~-------~ 178 (633)
.+.++++.++.+++.+++.++|++++|++|.... .+..+.....+++.... ....++.+. .
T Consensus 117 ~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~g~e~~~~~~~~-~~~~~r~~~~~~~~~~~ 195 (510)
T 4at0_A 117 GPGADEEKITDYCEGSVEHYNWLVDCGVPFKESFWGEPGWEPPFDDGLMYSGGENAAPFNEI-AAPAPRGHVPQMDGKRT 195 (510)
T ss_dssp CSSCCHHHHHHHHHTHHHHHHHHHHTTCCCCSCEECSSSSSCSSSCSEECCSSTTSTTGGGT-SCCCCCEECCCCSSCBT
T ss_pred CCCCCHHHHHHHHHhhHHHHHHHHHcCCeecccccCCcccccCCcccccccCcccccccccc-cCcccceeeeccccccc
Confidence 9999999999999999999999999999986541 11111111111111000 001112111 2
Q ss_pred cCCchH-HHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcC-eEEEccCCcCC--------
Q 046556 179 ADRTGH-ALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAA-STILATGGYGR-------- 248 (633)
Q Consensus 179 ~~~~g~-~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~~~-------- 248 (633)
.+..|. .+...|.+.+++.|++|+++++|++|+.+++++|+||++.+ +++...|+|+ .|||||||++.
T Consensus 196 g~~~g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~--~g~~~~i~A~k~VVlAtGG~~~n~~m~~~~ 273 (510)
T 4at0_A 196 GEKGGGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ--YGKEVAVRARRGVVLATGSFAYNDKMIEAH 273 (510)
T ss_dssp TTBCTTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEE--TTEEEEEEEEEEEEECCCCCTTCHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEE--CCcEEEEEeCCeEEEeCCChhhCHHHHHHh
Confidence 233555 88999999999999999999999999994479999999874 5667789994 99999999984
Q ss_pred ---CCCC-CCCCCCCchHHHHHHHHcCCCccCccccccccccccCCcceeeeccccCCCcEEECCCCCccccccCCcc--
Q 046556 249 ---AYFS-ATSAHTCTGDGNAMVSRAGLPLEDLEFVQFHPTGIYGAGCLLLKVGSRGEGGILRNSEGERFMERYAPTA-- 322 (633)
Q Consensus 249 ---~~~~-~~~~~~~tGdg~~~a~~aGa~l~~~e~~~~~p~~~~~~~~~~~~~~~~g~g~~~vn~~G~rf~~~~~~~~-- 322 (633)
.+.. +++++.+||||+.||+++||.+.+||++|++|.. .+..+ .++++||.+|+||++|..+..
T Consensus 274 ~p~~~~~~~~~~~~~tGdGi~ma~~~Ga~~~~m~~~~~~p~~--~~~~~--------~~~i~vn~~G~RF~nE~~~~~~~ 343 (510)
T 4at0_A 274 APRLIGRPGAAIEEHDGRSILMAQALGADLAHMDATEVAFVC--DPQLI--------VRGILVNGRGQRYVPEDTYSGRI 343 (510)
T ss_dssp CGGGTTCBCCSCTTCCCHHHHHHHTTTBCEECTTCEEEEECS--CHHHH--------TTSEEECTTSCBCSCTTSCHHHH
T ss_pred CccccCCCCCCCCCCCHHHHHHHHHhCcCeecchhhhccCcc--Chhhc--------cccEEECCCCCCCCCCCccHHHH
Confidence 2222 3457789999999999999999999999977653 11111 357999999999999853220
Q ss_pred c-------cccchhHHhHHHHHHHHhcCCCC---CCCCeEEE-------ecCCCChhHHHHHhHHHHHHHHHHcCCCCC-
Q 046556 323 K-------DLASRDVVSRSMTMEIREGRGVG---PLKDHIYL-------HLNHLPPDVLKERLPGISETAAIFAGVDVT- 384 (633)
Q Consensus 323 ~-------~l~~r~~~~~~i~~e~~~g~g~~---~~~~~v~~-------d~~~~~~~~l~~~~~~~~~~~~~~~G~d~~- 384 (633)
. .....-++............... +....... +..++|++.|++++..||+.+. .|+|+.
T Consensus 344 ~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~~~~~~~~~~~~adtleeLA~~~g~~~~~l~~tv~~yN~~~~--~g~D~~f 421 (510)
T 4at0_A 344 GQMTLFHQDNQAFLIIDEASYEEGAAATTATPFLRVQPKWAAETVEELESDMGLPAGALQSTVEVYNKHAA--EGSDPLL 421 (510)
T ss_dssp HHCCCCCSTTCCEEEEEHHHHHHHHHSCCSCGGGCCCCSEEESSHHHHHHHTTCCTTHHHHHHHHHHHHHT--TTCCTTT
T ss_pred HHHHHhCCCCeEEEEECHHHHHhhhcccccccchhhhhcccCCCHHHHHHHhCcCHHHHHHHHHHHHHHHh--cCCCccc
Confidence 0 00001111222222211110000 00001111 1246788899999999999886 688864
Q ss_pred -CC-----C-------eec-cccccccccCcccCCCCceeeecCCCCCCcccCeeeecccccccccCCCCCChhhHHHHH
Q 046556 385 -KE-----P-------IPV-LPTVHYNMGGIPTNHHGEVVTIKGDDPDEVVPGLMAAGEAACASVHGANRLGANSLLDIV 450 (633)
Q Consensus 385 -~~-----~-------i~v-~p~~~~~~GGi~vd~~~~vl~~d~~~~~T~ipGLyAaGe~a~~g~~Ga~rlgg~~l~~a~ 450 (633)
++ | +++ .|..|+|+||++||+++|||+. ++++|||||||||++ +|+||+||++|++|++|+
T Consensus 422 gk~~~~l~pi~~Pfya~~~~~~~~~~t~GGl~~d~~~~Vl~~----~g~~I~GLyAaGe~~-gg~~g~~y~~G~sl~~~~ 496 (510)
T 4at0_A 422 HKKSEWVKPIGTPVAALDLRGFTLGFTLGGLRTTVNSEVLHV----SGEPIPGLFAAGRCT-SGVCAGGYASGTSLGDGS 496 (510)
T ss_dssp CCCGGGCCCCCSSEEEEECTTCEEEEECCEECBCTTCEEEBT----TSSEEEEEEECGGGB-CCSCSSSCCTTHHHHHHH
T ss_pred CCCcccccCCCCCEEEEEeecCcccccCcCeeECCCCceECC----CCCCcCCeeeceecc-cCCCcCCCCcHHhHHHHH
Confidence 22 1 234 5889999999999999999986 559999999999998 599999999999999999
Q ss_pred HHHHHHHHHHHH
Q 046556 451 VFGRACANRVAE 462 (633)
Q Consensus 451 ~~G~~Ag~~aa~ 462 (633)
+|||+||++|++
T Consensus 497 ~fGr~Ag~~aa~ 508 (510)
T 4at0_A 497 FYGRRAGISAAK 508 (510)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 999999999975
No 13
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=100.00 E-value=2.6e-32 Score=295.89 Aligned_cols=357 Identities=18% Similarity=0.250 Sum_probs=219.7
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHHHH
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI 125 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v 125 (633)
.++||+|||||++|++||+.|+++|.+|+||||....++.+..+.++.+.... ...++.++.. +.. ++...
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~---~~~~~~~~~~-~~~-----~~~~~ 95 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTN---RLPLDEIVKH-IPG-----NGRFL 95 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEE---CSCHHHHHHT-CTB-----TGGGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccC---cccHHHHHHH-hcc-----ChHHH
Confidence 45899999999999999999999999999999986654444344344332221 1223222211 110 11111
Q ss_pred HH-H-HHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCCEEEE
Q 046556 126 QY-M-CREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFV 203 (633)
Q Consensus 126 ~~-~-~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv~i~~ 203 (633)
.. + .....+.++|+.++|+++.....+.+++ ....+..+...|.+.+++.|+++++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~~p----------------------~~~~~~~l~~~L~~~~~~~GV~i~~ 153 (447)
T 2i0z_A 96 YSAFSIFNNEDIITFFENLGVKLKEEDHGRMFP----------------------VSNKAQSVVDALLTRLKDLGVKIRT 153 (447)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCCEEECGGGEEEE----------------------TTCCHHHHHHHHHHHHHHTTCEEEC
T ss_pred HHHHHhcCHHHHHHHHHhcCCceEEeeCCEEEC----------------------CCCCHHHHHHHHHHHHHHCCCEEEe
Confidence 11 1 1123466788899999886543222211 1224578889999999999999999
Q ss_pred EEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCCCCCCCCCCCCchHHHHHHHHcCCCccCcc--ccc
Q 046556 204 EYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVSRAGLPLEDLE--FVQ 281 (633)
Q Consensus 204 ~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e--~~~ 281 (633)
+++|++|.. ++++|++|.+ .+|+ .++|+.||+|||+++. ..+++||||+.++.++|+.+..+. +++
T Consensus 154 ~~~V~~i~~-~~~~v~~V~~---~~G~--~i~Ad~VVlAtGg~s~------~~~g~tG~g~~la~~~G~~~~~~~p~~~~ 221 (447)
T 2i0z_A 154 NTPVETIEY-ENGQTKAVIL---QTGE--VLETNHVVIAVGGKSV------PQTGSTGDGYAWAEKAGHTITELFPTEVP 221 (447)
T ss_dssp SCCEEEEEE-ETTEEEEEEE---TTCC--EEECSCEEECCCCSSS------GGGSCSSHHHHHHHHTTCCEEEEEECSCC
T ss_pred CcEEEEEEe-cCCcEEEEEE---CCCC--EEECCEEEECCCCCcC------CCCCCCcHHHHHHHHCCCCcccCcceeee
Confidence 999999998 5778888876 4665 4899999999999983 234789999999999999987655 445
Q ss_pred ccccccc-----CCcceeeeccccCCCcEEE-CCCCCccccccCCc---cccccchhH--HhHHHHHHHHhcC--CCCCC
Q 046556 282 FHPTGIY-----GAGCLLLKVGSRGEGGILR-NSEGERFMERYAPT---AKDLASRDV--VSRSMTMEIREGR--GVGPL 348 (633)
Q Consensus 282 ~~p~~~~-----~~~~~~~~~~~~g~g~~~v-n~~G~rf~~~~~~~---~~~l~~r~~--~~~~i~~e~~~g~--g~~~~ 348 (633)
+++...+ ..+..+ ....+.+ |.+|+||.++.... ...+....+ .+..+...+ ++. +.
T Consensus 222 ~~~~~~~~~~~~~~g~~~------~~~~~~~~~~~g~r~~~~~ge~~~t~~~~~g~~~l~~s~~~~~~~-~~~~~~~--- 291 (447)
T 2i0z_A 222 ILSNEPFIRDRSLQGLAL------RDINLSVLNPKGKAIISHKMDMLFTHFGLSGPAALRCSQFVVKAL-KKFKTNT--- 291 (447)
T ss_dssp EECCCHHHHTTTTTTCEE------EEEEEEECC----CEEEEEEEEEECSSEEESHHHHHHHHHHHHHH-HHHCCSC---
T ss_pred eecCCcccccccccCccc------CCeEEEEEecCCceEecccCCeEEECCcccHHHHHHHHHHHHHHH-hcccCCc---
Confidence 5433211 011110 1123556 67888865531110 001111111 222222233 221 11
Q ss_pred CCeEEEecC-CCChhHHHHHh--------------------H-HHHHHHHHHcCCCCCC-----------------CCee
Q 046556 349 KDHIYLHLN-HLPPDVLKERL--------------------P-GISETAAIFAGVDVTK-----------------EPIP 389 (633)
Q Consensus 349 ~~~v~~d~~-~~~~~~l~~~~--------------------~-~~~~~~~~~~G~d~~~-----------------~~i~ 389 (633)
..+.+|+. ..+.+.+.+.+ + .+.+.+....|+|+.+ ..++
T Consensus 292 -~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 370 (447)
T 2i0z_A 292 -IQMSIDALPEENSEQLFQRMLKQMKEDPKKGIKNVLKGYVPERYFLFLLEKNEIDGSEQAGQVSHEKIRALVKDFKEFT 370 (447)
T ss_dssp -EEEEEESCTTSCHHHHHHHHHHHHTTSTTSBHHHHTTTSSCHHHHHHHHHHTTCCTTSBGGGSCHHHHHHHHHHHHHEE
T ss_pred -eEEEEECCCCCCHHHHHHHHHHHHHhChhhhHHHhccccChHHHHHHHHHHcCCCcCCchhhCCHHHHHHHHHHhhCCE
Confidence 13566653 34455443322 1 1233334446888654 2233
Q ss_pred ccc-------cccccccCcccCC-CCceeeecCCCCCCcccCeeeecccccccccCCCCCChhhHHHHHHHHHHHHHHHH
Q 046556 390 VLP-------TVHYNMGGIPTNH-HGEVVTIKGDDPDEVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVA 461 (633)
Q Consensus 390 v~p-------~~~~~~GGi~vd~-~~~vl~~d~~~~~T~ipGLyAaGe~a~~g~~Ga~rlgg~~l~~a~~~G~~Ag~~aa 461 (633)
+.| .+|+|+|||.+|+ +.+.+ +.+.|||||||||++ ++|| |+||++|++|++||++||++|+
T Consensus 371 ~~~~~~~~~~~a~~T~GGv~~~~i~~~t~------~~~~i~GLy~aGEv~--~v~g--~~GG~~l~~a~~~G~~Ag~~aa 440 (447)
T 2i0z_A 371 VNVNGTQSIEKAFVTGGGVSVKEINPKEM------SSKFTNGLYFCGEVL--DIHG--YTGGYNITSALVTGRIAGTTAG 440 (447)
T ss_dssp EEECEECCGGGCSSEEEEECGGGEETTTT------EESSSBTEEECGGGB--SCBC--CTTTHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCccEEEEeCCceeeeccccccc------ccCcCCCEEEEEeec--cCcc--CCCcHHHHHHHHHHHHHHHHHH
Confidence 333 3899999999998 22211 226899999999998 4898 8999999999999999999999
Q ss_pred HHhCC
Q 046556 462 EIQRP 466 (633)
Q Consensus 462 ~~~~~ 466 (633)
++++.
T Consensus 441 ~~~~~ 445 (447)
T 2i0z_A 441 ENAKM 445 (447)
T ss_dssp HHHC-
T ss_pred Hhhhh
Confidence 88653
No 14
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.91 E-value=2.2e-23 Score=221.89 Aligned_cols=187 Identities=14% Similarity=0.178 Sum_probs=122.3
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHHHH
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI 125 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v 125 (633)
.++||+|||||++|++||+.|+++|.+|+|+||....++....+.||.+..... . ..+.. .+....... ....
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~-~-~~~~~----~~~~~~~~~-~~~l 75 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNL-E-VTPAH----YLSQNPHFV-KSAL 75 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEES-S-CCGGG----EECSCTTST-HHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCC-c-cCHHH----hccCCHHHH-HHHH
Confidence 468999999999999999999999999999999865544443344444321110 0 00000 000000000 1111
Q ss_pred HHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCCEEEEEE
Q 046556 126 QYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEY 205 (633)
Q Consensus 126 ~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv~i~~~~ 205 (633)
..+ ...+.++|+.++|+++.....+.+++ .+ ....+...|.+.+++.|+++++++
T Consensus 76 ~~~--~~~~~~~~~~~~Gi~~~~~~~g~~~p----------------------~~-~~~~l~~~L~~~~~~~Gv~i~~~~ 130 (401)
T 2gqf_A 76 ARY--TNWDFISLVAEQGITYHEKELGQLFC----------------------DE-GAEQIVEMLKSECDKYGAKILLRS 130 (401)
T ss_dssp HHS--CHHHHHHHHHHTTCCEEECSTTEEEE----------------------TT-CTHHHHHHHHHHHHHHTCEEECSC
T ss_pred HhC--CHHHHHHHHHhCCCceEECcCCEEcc----------------------CC-CHHHHHHHHHHHHHHCCCEEEeCC
Confidence 111 13356778889999886543332221 11 346788889999999999999999
Q ss_pred EEEEEEEcc---CCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCCCCCCCCCCCCchHHHHHHHHcCCCccCc
Q 046556 206 FALDLIMNS---DGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVSRAGLPLEDL 277 (633)
Q Consensus 206 ~v~~L~~d~---~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~ 277 (633)
.|+++..++ ++.+ .+.+ .+| .++|+.||+|||+++.. ..+++|+|+.++.++|+.+..+
T Consensus 131 ~v~~i~~~~~g~~~~~-~v~~---~~g---~i~ad~VVlAtG~~s~p------~~g~~G~g~~la~~~G~~i~~~ 192 (401)
T 2gqf_A 131 EVSQVERIQNDEKVRF-VLQV---NST---QWQCKNLIVATGGLSMP------GLGATPFGYQIAEQFGIPVIPP 192 (401)
T ss_dssp CEEEEEECCSCSSCCE-EEEE---TTE---EEEESEEEECCCCSSCG------GGTCCSHHHHHHHHTTCCEEEE
T ss_pred EEEEEEcccCcCCCeE-EEEE---CCC---EEECCEEEECCCCccCC------CCCCChHHHHHHHHCCCCcccC
Confidence 999998731 3443 3332 344 48999999999998742 2378999999999999987654
No 15
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.89 E-value=3.5e-22 Score=213.27 Aligned_cols=189 Identities=20% Similarity=0.267 Sum_probs=122.6
Q ss_pred ccccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHH
Q 046556 44 VDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQD 123 (633)
Q Consensus 44 ~~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~ 123 (633)
++.++||+|||||+||++||+.|+++|.+|+|+||....++....+.||.+....... .... ......... ..
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~--~~~~----~~~~~~~~~-~~ 96 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHA--SPRN----FLSGNPHFC-KS 96 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTC--SGGG----EEESSTTTT-HH
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCC--CHHH----HhhcCHHHH-HH
Confidence 3467999999999999999999999999999999987655444444444433221100 0000 000000000 01
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCCEEEE
Q 046556 124 AIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFV 203 (633)
Q Consensus 124 ~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv~i~~ 203 (633)
....+ ...+.++++++.|+++.....+..+. ......+.+.|.+.+++.|+++++
T Consensus 97 ~l~~~--~~~~~~~~~~~~Gi~~~~~~~g~~~~-----------------------~~~~~~l~~~L~~~l~~~Gv~i~~ 151 (417)
T 3v76_A 97 ALARY--RPQDFVALVERHGIGWHEKTLGQLFC-----------------------DHSAKDIIRMLMAEMKEAGVQLRL 151 (417)
T ss_dssp HHHHS--CHHHHHHHHHHTTCCEEECSTTEEEE-----------------------SSCHHHHHHHHHHHHHHHTCEEEC
T ss_pred HHHhc--CHHHHHHHHHHcCCCcEEeeCCEEee-----------------------CCCHHHHHHHHHHHHHHCCCEEEE
Confidence 11111 12356678888999876554433221 223467888999999999999999
Q ss_pred EEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCCCCCCCCCCCCchHHHHHHHHcCCCccCcc
Q 046556 204 EYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVSRAGLPLEDLE 278 (633)
Q Consensus 204 ~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e 278 (633)
+++|+++.. +++. +.|.+ .+| .+.||.||+|||+++. ...+.+|+|+.++...|..+..+.
T Consensus 152 ~~~V~~i~~-~~~~-~~V~~---~~g---~i~ad~VIlAtG~~S~------p~~gs~g~g~~la~~~G~~i~~~~ 212 (417)
T 3v76_A 152 ETSIGEVER-TASG-FRVTT---SAG---TVDAASLVVASGGKSI------PKMGATGLAYRIAEQFGLPVVETR 212 (417)
T ss_dssp SCCEEEEEE-ETTE-EEEEE---TTE---EEEESEEEECCCCSSC------GGGTCCCHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEEEE-eCCE-EEEEE---CCc---EEEeeEEEECCCCccC------CCCCCCcHHHHHHHHCCCCEeccc
Confidence 999999988 4443 23332 455 5899999999999872 223679999999999999876543
No 16
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.72 E-value=1.4e-17 Score=183.63 Aligned_cols=155 Identities=22% Similarity=0.295 Sum_probs=93.0
Q ss_pred ccccccEEEECCchHHHHHHHHHHhCCCcEEEEeecC--CCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCC
Q 046556 44 VDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF--PTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGD 121 (633)
Q Consensus 44 ~~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~--~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~ 121 (633)
+..+|||||||||+||++||+.|++.|.+|+|+|+.. ....++..+.||+. ..++.+.+.....+
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia-----------~~~lv~el~al~g~-- 84 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVA-----------KGQITREIDALGGE-- 84 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHH-----------HHHHHHHHHHHTCS--
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhh-----------HHHHHHHHHhcccH--
Confidence 4456999999999999999999999999999999863 22212222223221 01111111111110
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhC-CCE
Q 046556 122 QDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKH-NTQ 200 (633)
Q Consensus 122 ~~~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~-gv~ 200 (633)
...++...|+.|....... + ..........+ ...+...|.+.+++. |++
T Consensus 85 -------------~~~~~d~~gi~f~~l~~~k------g---------pav~~~r~~~D--r~~l~~~L~~~l~~~~GV~ 134 (641)
T 3cp8_A 85 -------------MGKAIDATGIQFRMLNRSK------G---------PAMHSPRAQAD--KTQYSLYMRRIVEHEPNID 134 (641)
T ss_dssp -------------HHHHHHHHEEEEEEECSSS------C---------TTTCEEEEEEC--HHHHHHHHHHHHHTCTTEE
T ss_pred -------------HHHHHHhcCCchhhccccc------C---------ccccchhhhcC--HHHHHHHHHHHHHhCCCCE
Confidence 1122334456654322110 0 00001111122 246677788888774 999
Q ss_pred EEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCC
Q 046556 201 FFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGR 248 (633)
Q Consensus 201 i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 248 (633)
++ +..|++|.. ++++|.||.+ .+|+ .|.|+.||+|||++..
T Consensus 135 I~-~~~V~~L~~-d~g~V~GV~t---~~G~--~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 135 LL-QDTVIGVSA-NSGKFSSVTV---RSGR--AIQAKAAILACGTFLN 175 (641)
T ss_dssp EE-ECCEEEEEE-ETTEEEEEEE---TTSC--EEEEEEEEECCTTCBT
T ss_pred EE-eeEEEEEEe-cCCEEEEEEE---CCCc--EEEeCEEEECcCCCCC
Confidence 86 458999988 6788998876 5675 4899999999999864
No 17
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.65 E-value=4.3e-16 Score=159.57 Aligned_cols=36 Identities=31% Similarity=0.320 Sum_probs=32.5
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
+++|||+|||||+||++||++|+++|++|+|+||..
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 356999999999999999999999999999999964
No 18
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.64 E-value=6.3e-14 Score=153.55 Aligned_cols=167 Identities=20% Similarity=0.188 Sum_probs=96.9
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHH--HHHHHHHhcCCC---CC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWR--WHMYDTVKGSDW---LG 120 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~--~~~~d~~~~~~~---~~ 120 (633)
.++||+|||||++|++||+.|++.|++|+|+|++....+..... ++.............. ..-......+.. +.
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~-~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~ 184 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDT-FGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK 184 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHH-HHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccch-hcccccccccccccceeccCCcccccCCceEEEec
Confidence 45899999999999999999999999999999975421110000 0000000000000000 000000000000 00
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCCE
Q 046556 121 DQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQ 200 (633)
Q Consensus 121 ~~~~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv~ 200 (633)
++.. ...+.++++..+|.+.....++. .+ ........+...|.+.+++.|++
T Consensus 185 ~~~~------~~~~v~~~~~~~G~~~~i~~~~~---------p~-------------~G~~~~~~l~~~L~~~l~~~Gv~ 236 (549)
T 3nlc_A 185 DPNF------YGRKVITEFVEAGAPEEILYVSK---------PH-------------IGTFKLVTMIEKMRATIIELGGE 236 (549)
T ss_dssp CTTC------HHHHHHHHHHHTTCCGGGGTBSS---------CC-------------CCHHHHHHHHHHHHHHHHHTTCE
T ss_pred cccc------cHHHHHHHHHHcCCCceEeeccc---------cc-------------cccchHHHHHHHHHHHHHhcCCE
Confidence 1000 11234456677787654322110 00 00001256778888889899999
Q ss_pred EEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 201 FFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 201 i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
++++++|++|.. +++++.+|.+ .+|+. +.|+.||+|+|.++
T Consensus 237 I~~~t~V~~I~~-~~~~v~gV~l---~~G~~--i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 237 IRFSTRVDDLHM-EDGQITGVTL---SNGEE--IKSRHVVLAVGHSA 277 (549)
T ss_dssp EESSCCEEEEEE-SSSBEEEEEE---TTSCE--EECSCEEECCCTTC
T ss_pred EEeCCEEEEEEE-eCCEEEEEEE---CCCCE--EECCEEEECCCCCh
Confidence 999999999998 6788888877 56764 89999999999876
No 19
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.63 E-value=1.1e-14 Score=160.06 Aligned_cols=154 Identities=19% Similarity=0.270 Sum_probs=92.6
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecC--CCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHH
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF--PTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQD 123 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~--~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~ 123 (633)
.+|||||||||+||+.||+.|++.|++|+|||+.. ....++..+.||+. ..++.+.+.....
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia-----------~g~lv~eldalgg----- 89 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIA-----------KGIVVREIDALGG----- 89 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTT-----------HHHHHHHHHHHTC-----
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccc-----------hHHHHHHHHHhhh-----
Confidence 46999999999999999999999999999999963 21111111112210 0011111110000
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHh-CCCEEE
Q 046556 124 AIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMK-HNTQFF 202 (633)
Q Consensus 124 ~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~-~gv~i~ 202 (633)
....++...|+.|....... +...+......+ ...+...|.+.+++ .|+++
T Consensus 90 ----------~~~~~~d~~gi~f~~l~~~k---------------Gpav~~~r~~~D--r~~~~~~L~~~Le~~~GVeI- 141 (637)
T 2zxi_A 90 ----------EMGKAIDQTGIQFKMLNTRK---------------GKAVQSPRAQAD--KKRYREYMKKVCENQENLYI- 141 (637)
T ss_dssp ----------SHHHHHHHHEEEEEEESTTS---------------CGGGCEEEEEEC--HHHHHHHHHHHHHTCTTEEE-
T ss_pred ----------HHHHHhhhcccceeeccccc---------------CccccchhhhCC--HHHHHHHHHHHHHhCCCCEE-
Confidence 01112233455554221100 000111111122 25677888888887 59999
Q ss_pred EEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCC
Q 046556 203 VEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRA 249 (633)
Q Consensus 203 ~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 249 (633)
.+++|++|.. ++++|+||.+ .+|. .|.|+.||+|||++...
T Consensus 142 ~~~~Vt~L~~-e~g~V~GV~t---~dG~--~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 142 KQEEVVDIIV-KNNQVVGVRT---NLGV--EYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp EESCEEEEEE-SSSBEEEEEE---TTSC--EEECSEEEECCTTCBTC
T ss_pred EEeEEEEEEe-cCCEEEEEEE---CCCc--EEEeCEEEEccCCCccC
Confidence 4679999998 6789999887 5675 48999999999998753
No 20
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.61 E-value=2.1e-14 Score=158.53 Aligned_cols=154 Identities=22% Similarity=0.332 Sum_probs=91.8
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecC--CCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHH
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF--PTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQD 123 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~--~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~ 123 (633)
.+|||||||||+||++||+.|++.|.+|+|||+.. ....++..+.|++. ..++.+.+......
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia-----------~~~lv~ei~algg~---- 91 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIG-----------KGHLVKEVDALGGL---- 91 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTT-----------HHHHHHHHHHTTCS----
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchh-----------hHHHHHHHHHhccH----
Confidence 46999999999999999999999999999999863 21111111112210 01111111110000
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHh-CCCEEE
Q 046556 124 AIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMK-HNTQFF 202 (633)
Q Consensus 124 ~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~-~gv~i~ 202 (633)
...+....++.|....... +...+......+ ...+...|.+.+++ .|+++
T Consensus 92 -----------~~~~~d~~gi~f~~l~~~k---------------gpav~~~r~~~D--r~~~~~~L~e~Le~~~GV~I- 142 (651)
T 3ces_A 92 -----------MAKAIDQAGIQFRILNASK---------------GPAVRATRAQAD--RVLYRQAVRTALENQPNLMI- 142 (651)
T ss_dssp -----------HHHHHHHHEEEEEEESTTS---------------CGGGCEEEEEEC--HHHHHHHHHHHHHTCTTEEE-
T ss_pred -----------HHHHhhhcccchhhhhccc---------------CcccccchhhCC--HHHHHHHHHHHHHhCCCCEE-
Confidence 0112223344443221100 000011111112 24677788888887 69999
Q ss_pred EEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCC
Q 046556 203 VEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRA 249 (633)
Q Consensus 203 ~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 249 (633)
.+++|++|.. ++++|+||.+ .+|. .|.|+.||+|||+++..
T Consensus 143 ~~~~V~~L~~-e~g~V~GV~t---~dG~--~I~Ad~VVLATGt~s~~ 183 (651)
T 3ces_A 143 FQQAVEDLIV-ENDRVVGAVT---QMGL--KFRAKAVVLTVGTFLDG 183 (651)
T ss_dssp EECCEEEEEE-SSSBEEEEEE---TTSE--EEEEEEEEECCSTTTCC
T ss_pred EEEEEEEEEe-cCCEEEEEEE---CCCC--EEECCEEEEcCCCCccC
Confidence 5679999998 6788999877 5674 48999999999998753
No 21
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.61 E-value=5.3e-15 Score=151.87 Aligned_cols=36 Identities=31% Similarity=0.501 Sum_probs=33.5
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
+.+|||+|||||+||++||++|++.|++|+|+||..
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 357999999999999999999999999999999964
No 22
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.57 E-value=1.4e-15 Score=166.95 Aligned_cols=53 Identities=28% Similarity=0.427 Sum_probs=40.6
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALG 98 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~ 98 (633)
.+|||+|||+|+||+.||++|++.|++|+|||+..+...++....||.|.+.+
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~G 93 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVG 93 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccc
Confidence 46999999999999999999999999999999865432223333455555444
No 23
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.54 E-value=2.2e-15 Score=164.76 Aligned_cols=155 Identities=19% Similarity=0.207 Sum_probs=87.9
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHHHH
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI 125 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v 125 (633)
.+|||+|||||+||++||+.|++.|.+|+|+||......++....||.+...+ |.|...
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~g---------------------ciPsk~ 63 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVG---------------------CIPKKL 63 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHS---------------------HHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccC---------------------CcccHH
Confidence 46999999999999999999999999999999854433333334455544332 223333
Q ss_pred HHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCCEEEEEE
Q 046556 126 QYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEY 205 (633)
Q Consensus 126 ~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv~i~~~~ 205 (633)
..........+..+..+|+.+..... .... ......+.....+...+...+++.+++++...
T Consensus 64 l~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~ 125 (488)
T 3dgz_A 64 MHQAALLGGMIRDAHHYGWEVAQPVQ--HNWK----------------TMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK 125 (488)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSSCC--CCHH----------------HHHHHHHHHHHHHHHHHHHHHHHTTCEEECCE
T ss_pred HHHHHHHHHHHHHHHhcCcccCCcCc--cCHH----------------HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE
Confidence 33344445555666777876542110 0000 00000000011222233344556799986554
Q ss_pred EEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 206 FALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 206 ~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
+.. . +...+ .+. ..+|+...+.+|.||||||+..
T Consensus 126 -~~~--~-~~~~v---~v~-~~~g~~~~~~~d~lViATGs~p 159 (488)
T 3dgz_A 126 -ASF--V-DEHTV---RGV-DKGGKATLLSAEHIVIATGGRP 159 (488)
T ss_dssp -EEE--S-SSSEE---EEE-CTTSCEEEEEEEEEEECCCEEE
T ss_pred -EEE--c-cCCeE---EEE-eCCCceEEEECCEEEEcCCCCC
Confidence 221 2 23322 222 2567666799999999999754
No 24
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.52 E-value=2.9e-15 Score=164.90 Aligned_cols=156 Identities=19% Similarity=0.173 Sum_probs=89.2
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHHH
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDA 124 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~ 124 (633)
..+|||+|||||+||++||+.|++.|++|+|+||......++.+..||.+...+ |.|..
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~G---------------------ciPsk 88 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVG---------------------CIPKK 88 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHS---------------------HHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcC---------------------ccchH
Confidence 457999999999999999999999999999999965443344444566554332 22333
Q ss_pred HHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCCEEEEE
Q 046556 125 IQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVE 204 (633)
Q Consensus 125 v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv~i~~~ 204 (633)
...........+..+..+|+.+..... .... ......+.....+...+...+++.+++++.+
T Consensus 89 ~l~~~~~~~~~~~~~~~~g~~~~~~~~--~d~~----------------~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g 150 (519)
T 3qfa_A 89 LMHQAALLGQALQDSRNYGWKVEETVK--HDWD----------------RMIEAVQNHIGSLNWGYRVALREKKVVYENA 150 (519)
T ss_dssp HHHHHHHHHHHHHHHHHTTBCCCSSCC--BCHH----------------HHHHHHHHHHHHHHHHHHHHHHHTTCEEECS
T ss_pred HHHHHHHHHHHHHHHHhcCcccCCcCc--cCHH----------------HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 333333444555667777876532110 0000 0000000001122223334455679998766
Q ss_pred EEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 205 YFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 205 ~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
. +..+ +...+ .+. ..+|+...+.+|.||||||+..
T Consensus 151 ~-a~~~---d~~~v---~v~-~~~g~~~~i~~d~lViATGs~p 185 (519)
T 3qfa_A 151 Y-GQFI---GPHRI---KAT-NNKGKEKIYSAERFLIATGERP 185 (519)
T ss_dssp E-EEEE---ETTEE---EEE-CTTCCCCEEEEEEEEECCCEEE
T ss_pred E-EEEe---eCCEE---EEE-cCCCCEEEEECCEEEEECCCCc
Confidence 5 2222 22322 222 2456555699999999999754
No 25
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.50 E-value=3.9e-13 Score=137.81 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=32.6
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
..|||+|||||+||++||++|+++|++|+|+|+..
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 35899999999999999999999999999999863
No 26
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.49 E-value=4.7e-14 Score=144.98 Aligned_cols=112 Identities=18% Similarity=0.236 Sum_probs=75.7
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHHHHH
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQ 126 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v~ 126 (633)
.+||+|||||+||++||+.|+++|++|+|+||. . |+.....+...
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~-gg~~~~~~~~~-------------------------------- 59 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--P-GGQLTEAGIVD-------------------------------- 59 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--T-TGGGGGCCEEC--------------------------------
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--C-CCeeccccccc--------------------------------
Confidence 589999999999999999999999999999996 2 21111100000
Q ss_pred HHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCCEEEEEEE
Q 046556 127 YMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYF 206 (633)
Q Consensus 127 ~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv~i~~~~~ 206 (633)
.+.+. ....+..+...+.+.+++.|++++. ++
T Consensus 60 -------------------------------~~~~~----------------~~~~~~~~~~~~~~~~~~~~v~~~~-~~ 91 (323)
T 3f8d_A 60 -------------------------------DYLGL----------------IEIQASDMIKVFNKHIEKYEVPVLL-DI 91 (323)
T ss_dssp -------------------------------CSTTS----------------TTEEHHHHHHHHHHHHHTTTCCEEE-SC
T ss_pred -------------------------------ccCCC----------------CCCCHHHHHHHHHHHHHHcCCEEEE-EE
Confidence 00000 0012356777788888889999988 88
Q ss_pred EEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCC
Q 046556 207 ALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGR 248 (633)
Q Consensus 207 v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 248 (633)
|+++.. +++.+. +.. .+|+ .+.+|.||+|||+...
T Consensus 92 v~~i~~-~~~~~~-v~~---~~g~--~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 92 VEKIEN-RGDEFV-VKT---KRKG--EFKADSVILGIGVKRR 126 (323)
T ss_dssp EEEEEE-C--CEE-EEE---SSSC--EEEEEEEEECCCCEEC
T ss_pred EEEEEe-cCCEEE-EEE---CCCC--EEEcCEEEECcCCCCc
Confidence 999987 444321 222 4554 4889999999998753
No 27
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.49 E-value=5.3e-14 Score=145.31 Aligned_cols=117 Identities=18% Similarity=0.202 Sum_probs=77.6
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHHHH
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI 125 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v 125 (633)
..+||+|||||+||++||+.|++.|++|+|+||....+|.... ...
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~------~~~---------------------------- 51 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSA------LYP---------------------------- 51 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH------HCT----------------------------
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehh------cCC----------------------------
Confidence 3589999999999999999999999999999997432211100 000
Q ss_pred HHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCCEEEEEE
Q 046556 126 QYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEY 205 (633)
Q Consensus 126 ~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv~i~~~~ 205 (633)
+..+. ...+. ....+..+...+.+.+.+.+++++.++
T Consensus 52 -----------------~~~~~----------~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (332)
T 3lzw_A 52 -----------------EKYIY----------DVAGF----------------PKIRAQELINNLKEQMAKFDQTICLEQ 88 (332)
T ss_dssp -----------------TSEEC----------CSTTC----------------SSEEHHHHHHHHHHHHTTSCCEEECSC
T ss_pred -----------------CceEe----------ccCCC----------------CCCCHHHHHHHHHHHHHHhCCcEEccC
Confidence 00000 00000 001235777788888888899999999
Q ss_pred EEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCc
Q 046556 206 FALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGY 246 (633)
Q Consensus 206 ~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 246 (633)
+|+++..++++.+ -+.+ .+|+ +.+|.||+|||..
T Consensus 89 ~v~~i~~~~~~~~-~v~~---~~g~---~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 89 AVESVEKQADGVF-KLVT---NEET---HYSKTVIITAGNG 122 (332)
T ss_dssp CEEEEEECTTSCE-EEEE---SSEE---EEEEEEEECCTTS
T ss_pred EEEEEEECCCCcE-EEEE---CCCE---EEeCEEEECCCCC
Confidence 9999987333222 2222 4553 8899999999984
No 28
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.48 E-value=1.3e-14 Score=158.32 Aligned_cols=155 Identities=19% Similarity=0.231 Sum_probs=84.3
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCC-CcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHH
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTR-SHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQD 123 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~-g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~ 123 (633)
..+|||+|||||+||++||+.|++.|++|+|+||..... .++.+..||.+.+.+ |.|.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~g---------------------ciPs 65 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVG---------------------CIPK 65 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHS---------------------HHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccC---------------------chhh
Confidence 356999999999999999999999999999999643221 222233455543332 2233
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCCEEEE
Q 046556 124 AIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFV 203 (633)
Q Consensus 124 ~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv~i~~ 203 (633)
............+..+..+|+.+..... .... ......+..-..+...+...+++.+++++.
T Consensus 66 k~l~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 127 (483)
T 3dgh_A 66 KLMHQASLLGEAVHEAAAYGWNVDDKIK--PDWH----------------KLVQSVQNHIKSVNWVTRVDLRDKKVEYIN 127 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHTTBCCCCCCC--BCHH----------------HHHHHHHHHHHHHHHHHHHHHHHTTCEEEC
T ss_pred HHHHHHHHHHHHHHHHHhcCcccCCcCc--cCHH----------------HHHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 3333333444455566677776542110 0000 000000000011222233345567899876
Q ss_pred EEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 204 EYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 204 ~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
+... + . +...+ .+. ..+|+ ..+.+|.||||||+..
T Consensus 128 g~a~--~-~-~~~~v---~v~-~~~g~-~~~~~d~lviATGs~p 162 (483)
T 3dgh_A 128 GLGS--F-V-DSHTL---LAK-LKSGE-RTITAQTFVIAVGGRP 162 (483)
T ss_dssp SEEE--E-E-ETTEE---EEE-CTTCC-EEEEEEEEEECCCEEE
T ss_pred eEEE--E-c-cCCEE---EEE-eCCCe-EEEEcCEEEEeCCCCc
Confidence 5432 2 2 22322 222 24555 4689999999999754
No 29
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.47 E-value=1.1e-12 Score=138.64 Aligned_cols=61 Identities=23% Similarity=0.232 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..+...|.+.+.+.|++++.+++|+++.. ++++++++... .+++...++|+.||.|+|..+
T Consensus 102 ~~~~~~L~~~a~~~G~~~~~~~~v~~~~~-~~~~~~~v~~~--~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIK-ENGKVAGAKIR--HNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEE-ETTEEEEEEEE--ETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCcEEeeeeeeeeeee-ccceeeeeeec--ccccceEEEEeEEEeCCcccc
Confidence 46777888899999999999999999998 68888888765 367777899999999999765
No 30
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.42 E-value=4.4e-13 Score=140.43 Aligned_cols=184 Identities=14% Similarity=0.102 Sum_probs=101.1
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecC-CCCCcccccccceeeecCCCCcCCHHH--------HHHHHHhcC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF-PTRSHTVAAQGGINAALGNMTEDDWRW--------HMYDTVKGS 116 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~-~~~g~t~~~~Gg~~~~~~~~~~d~~~~--------~~~d~~~~~ 116 (633)
.++||+|||||++|++||+.|+++|++|+|+||.. ...+.+..+.|.+..... ........ .+.++....
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRNSEVIHAGIY-YPADSLKARLCVRGKHLLYEYCAAR 81 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTTSSSCCEECCCCS-SCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCccCcCCccccccCcc-CCCCCHhHHHHHHHHHHHHHHHHHc
Confidence 45899999999999999999999999999999985 444444444333322111 11222110 011111100
Q ss_pred C--C-----C---CCHHHHHHHHHHHHHHHHHHHHCCCc-ccccCCCcccccccCCcccccCCCCccceeEEcc---CCc
Q 046556 117 D--W-----L---GDQDAIQYMCREAPKAVIELENYGLP-FSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAA---DRT 182 (633)
Q Consensus 117 ~--~-----~---~~~~~v~~~~~~~~~~~~~l~~~Gv~-f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~---~~~ 182 (633)
. + + .+.... +......+++...|++ +........ ...++... .....+.. ...
T Consensus 82 ~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~p~~~--------~~~~~~~~~~~~~~ 148 (369)
T 3dme_A 82 GVPHQRLGKLIVATSDAEA----SQLDSIARRAGANGVDDLQHIDGAAA-RRLEPALH--------CTAALVSPSTGIVD 148 (369)
T ss_dssp TCCEECCCEEEEECSHHHH----TTHHHHHHHHHHTTCCCCEEEEHHHH-HHHCTTCC--------CSEEEEETTCEEEC
T ss_pred CCCcccCCEEEEecCHHHH----HHHHHHHHHHHHcCCCceeecCHHHH-HHhCCCce--------eeeeeECCCCEEEC
Confidence 0 0 0 011111 1112233344555654 322110000 00000000 00001111 112
Q ss_pred hHHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 183 GHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 183 g~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
...+...|.+.+++.|++++++++|++|.. +++.++.+.+ .+|+...+.||.||+|+|+++
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~-~~~~~~~v~~---~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRV-RPEGGFELDF---GGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-CTTSSEEEEE---CTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEE-cCCceEEEEE---CCCceeEEEeCEEEECCCcch
Confidence 467888999999999999999999999998 4444333443 567545699999999999886
No 31
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.42 E-value=5.2e-13 Score=138.28 Aligned_cols=118 Identities=23% Similarity=0.265 Sum_probs=77.2
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHHHH
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI 125 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v 125 (633)
..+||+|||||+||++||+.|++.|++|+|+|+....+|... ..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~--------~~---------------------------- 47 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLT--------AL---------------------------- 47 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHH--------HT----------------------------
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeee--------cc----------------------------
Confidence 468999999999999999999999999999999643211100 00
Q ss_pred HHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCCEEEEEE
Q 046556 126 QYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEY 205 (633)
Q Consensus 126 ~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv~i~~~~ 205 (633)
.+... ++ ...+.+ ...+..+...+.+.+.+.+++++.++
T Consensus 48 ------------------~~~~~-----~~--~~~~~~----------------~~~~~~~~~~l~~~~~~~~~~~~~~~ 86 (335)
T 2zbw_A 48 ------------------YPEKY-----IY--DVAGFP----------------KVYAKDLVKGLVEQVAPFNPVYSLGE 86 (335)
T ss_dssp ------------------CTTSE-----EC--CSTTCS----------------SEEHHHHHHHHHHHHGGGCCEEEESC
T ss_pred ------------------CCCce-----ee--ccCCCC----------------CCCHHHHHHHHHHHHHHcCCEEEeCC
Confidence 00000 00 000000 01235667777788888899999999
Q ss_pred EEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 206 FALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 206 ~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
.|+++.. +++. +.+.. .+|+ .+.+|.||+|||..+
T Consensus 87 ~v~~i~~-~~~~---~~v~~-~~g~--~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 87 RAETLER-EGDL---FKVTT-SQGN--AYTAKAVIIAAGVGA 121 (335)
T ss_dssp CEEEEEE-ETTE---EEEEE-TTSC--EEEEEEEEECCTTSE
T ss_pred EEEEEEE-CCCE---EEEEE-CCCC--EEEeCEEEECCCCCC
Confidence 9999987 3442 22222 4564 388999999999853
No 32
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.41 E-value=1.3e-13 Score=150.09 Aligned_cols=37 Identities=38% Similarity=0.555 Sum_probs=33.9
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPT 82 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~ 82 (633)
.+|||+|||||++|++||+.|++.|++|+|+||....
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 38 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGK 38 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 4699999999999999999999999999999997543
No 33
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.41 E-value=8.4e-13 Score=146.30 Aligned_cols=64 Identities=19% Similarity=0.190 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 183 GHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 183 g~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
...+...|.+.+++.|++++++++|++|.. ++++++||.+.+..+|+...++|+.||+|+|.|+
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~-~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIY-DQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEE-cCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 467888999999999999999999999999 6889999999876678777899999999999886
No 34
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.41 E-value=3.9e-13 Score=141.93 Aligned_cols=185 Identities=14% Similarity=0.165 Sum_probs=107.3
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHH------HHHHHHhc-C-
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRW------HMYDTVKG-S- 116 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~------~~~d~~~~-~- 116 (633)
..++||+|||||++|+++|+.|+++|.+|+||||.....+.+..+.|.+...... ...... .+.++... +
T Consensus 3 ~~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~~~~gas~~~~g~~~~~~~~--~~~~~l~~~~~~~~~~l~~~~~~ 80 (382)
T 1y56_B 3 PEKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIGSGSTFRCGTGIRQQFND--EANVRVMKRSVELWKKYSEEYGF 80 (382)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSHHHHCCCCCCCCCSS--HHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCccccccCeeeecCCC--hHHHHHHHHHHHHHHHHHHHhCC
Confidence 4578999999999999999999999999999999866555555555544332211 100000 01111110 0
Q ss_pred C----C-C---CCHHHHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEcc--CCchHHH
Q 046556 117 D----W-L---GDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAA--DRTGHAL 186 (633)
Q Consensus 117 ~----~-~---~~~~~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~--~~~g~~l 186 (633)
. + + .+++... ......+++.++|+++......... ..++..... .......... ......+
T Consensus 81 ~~~~~g~l~~~~~~~~~~----~~~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~~----~~~~~~~~~~~~~~~~~~l 151 (382)
T 1y56_B 81 SFKQTGYLFLLYDDEEVK----TFKRNIEIQNKFGVPTKLITPEEAK-EIVPLLDIS----EVIAASWNPTDGKADPFEA 151 (382)
T ss_dssp CEECCCEEEEECSHHHHH----HHHHHHHHHHHTTCCCEEECHHHHH-HSSTTCCCT----TCCEEEEETTCCEECHHHH
T ss_pred CeeccceEEEEeCHHHHH----HHHHHHHHHHhcCCCcEEeCHHHHH-HhCCCCCcc----cceEEEEcCCCeeECHHHH
Confidence 0 0 0 1222111 1223345566677765432111100 000100000 0000001100 0124678
Q ss_pred HHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 187 LHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 187 ~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
...|.+.+++.|++++++++|++|.. ++++++||.+ .+| .++||.||+|+|+++
T Consensus 152 ~~~l~~~~~~~Gv~i~~~~~v~~i~~-~~~~v~gv~~---~~g---~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 152 TTAFAVKAKEYGAKLLEYTEVKGFLI-ENNEIKGVKT---NKG---IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEE---TTE---EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHCCCEEECCceEEEEEE-ECCEEEEEEE---CCc---EEECCEEEECcchhH
Confidence 88899999999999999999999998 5778888765 455 489999999999876
No 35
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.40 E-value=6e-13 Score=139.38 Aligned_cols=120 Identities=21% Similarity=0.306 Sum_probs=78.4
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHHH
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDA 124 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~ 124 (633)
+..+||+|||||++|++||+.|++.|++|+|+|+....+|... ..
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~--------~~--------------------------- 56 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLA--------AL--------------------------- 56 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH--------HT---------------------------
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccc--------cc---------------------------
Confidence 3468999999999999999999999999999999643211110 00
Q ss_pred HHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCCEEEEE
Q 046556 125 IQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVE 204 (633)
Q Consensus 125 v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv~i~~~ 204 (633)
.+.. ..+ ...+. ....+..+...+.+.+.+.+++++.+
T Consensus 57 -------------------~~~~-----~~~--~~~~~----------------~~~~~~~~~~~l~~~~~~~~~~~~~~ 94 (360)
T 3ab1_A 57 -------------------YPEK-----HIY--DVAGF----------------PEVPAIDLVESLWAQAERYNPDVVLN 94 (360)
T ss_dssp -------------------CTTS-----EEC--CSTTC----------------SSEEHHHHHHHHHHHHHTTCCEEECS
T ss_pred -------------------CCCc-----ccc--cCCCC----------------CCCCHHHHHHHHHHHHHHhCCEEEcC
Confidence 0000 000 00000 00123567777888888889999999
Q ss_pred EEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 205 YFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 205 ~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
+.|+.+..++++.+ -+.+ .+|+ .+.++.||+|||+.+
T Consensus 95 ~~v~~i~~~~~~~~-~v~~---~~g~--~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 95 ETVTKYTKLDDGTF-ETRT---NTGN--VYRSRAVLIAAGLGA 131 (360)
T ss_dssp CCEEEEEECTTSCE-EEEE---TTSC--EEEEEEEEECCTTCS
T ss_pred CEEEEEEECCCceE-EEEE---CCCc--EEEeeEEEEccCCCc
Confidence 99999987333332 2222 4564 388999999999854
No 36
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.40 E-value=5.3e-13 Score=145.96 Aligned_cols=37 Identities=30% Similarity=0.480 Sum_probs=32.1
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCC
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFP 81 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~ 81 (633)
+.++||+|||||+||++||+.|++.|++|+|+||...
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 59 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRST 59 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 3469999999999999999999999999999998643
No 37
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.40 E-value=1.5e-12 Score=135.63 Aligned_cols=58 Identities=17% Similarity=0.107 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGR 248 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 248 (633)
..+...+.+.+++.|++++.+++|+++.. +++.+.++.+ .+| .+.+|.||+|||.++.
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~-~~~~~~~v~~---~~g---~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSH-FGERLRVVAR---DGR---QWLARAVISATGTWGE 133 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEE-ETTEEEEEET---TSC---EEEEEEEEECCCSGGG
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEE-CCCcEEEEEe---CCC---EEEeCEEEECCCCCCC
Confidence 56777788888889999999999999988 4554433332 455 4899999999998664
No 38
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.40 E-value=1.8e-12 Score=131.15 Aligned_cols=143 Identities=22% Similarity=0.273 Sum_probs=97.7
Q ss_pred ccccEEEECCchHHHHHHHHHHhC-CCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHHH
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEH-GFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDA 124 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~-G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~ 124 (633)
.++||+|||||++|++||+.|++. |.+|+|+||....++++. ..+++.... ...
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~-~~~~~~~~~---------------------~~~--- 92 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAW-LGGQLFSAM---------------------IVR--- 92 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTT-CCSTTCCCE---------------------EEE---
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCcee-cCCcchHHH---------------------HcC---
Confidence 468999999999999999999997 999999999865544332 222211000 000
Q ss_pred HHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHh-CCCEEEE
Q 046556 125 IQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMK-HNTQFFV 203 (633)
Q Consensus 125 v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~-~gv~i~~ 203 (633)
....+++.++|++|... +.+.. ......+...|.+++.+ .|+++++
T Consensus 93 --------~~~~~~l~~~G~~~~~~--~~~~~-----------------------~~~~~~~~~~l~~~~~~~~gv~i~~ 139 (284)
T 1rp0_A 93 --------KPAHLFLDEIGVAYDEQ--DTYVV-----------------------VKHAALFTSTIMSKLLARPNVKLFN 139 (284)
T ss_dssp --------TTTHHHHHHHTCCCEEC--SSEEE-----------------------ESCHHHHHHHHHHHHHTSTTEEEEE
T ss_pred --------cHHHHHHHHcCCCcccC--CCEEE-----------------------ecCHHHHHHHHHHHHHhcCCCEEEc
Confidence 01234666778887642 11100 00235677778888776 6999999
Q ss_pred EEEEEEEEEccCCcEEEEEEEEc---------CCCeEEEEEcCeEEEccCCcC
Q 046556 204 EYFALDLIMNSDGTCQGVIALNM---------EDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 204 ~~~v~~L~~d~~g~v~Gv~~~~~---------~~G~~~~i~A~~VVlAtGg~~ 247 (633)
+++|+++.. +++++.|+.+.+. .+++...+.||.||+|+|+.+
T Consensus 140 ~~~V~~i~~-~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s 191 (284)
T 1rp0_A 140 AVAAEDLIV-KGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDG 191 (284)
T ss_dssp TEEEEEEEE-ETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSS
T ss_pred CcEEEEEEe-cCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCch
Confidence 999999998 6788989887531 113445799999999999876
No 39
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.38 E-value=3.2e-12 Score=130.87 Aligned_cols=145 Identities=21% Similarity=0.258 Sum_probs=98.8
Q ss_pred ccccEEEECCchHHHHHHHHHHhC--CCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHH
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEH--GFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQD 123 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~--G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~ 123 (633)
.++||+|||||++||+||+.|+++ |++|+|+||....+++.. ..+.... .....
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~-~~g~~~~---------------------~~~~~-- 133 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAW-LGGQLFS---------------------AMVMR-- 133 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTT-CCBTTCC---------------------CEEEE--
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccc-cCCccch---------------------hhhcc--
Confidence 469999999999999999999997 999999999865443322 1111000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHh-CCCEEE
Q 046556 124 AIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMK-HNTQFF 202 (633)
Q Consensus 124 ~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~-~gv~i~ 202 (633)
+...+++.++|++|... |.+. .. . ....+...|.+++++ .|++++
T Consensus 134 ---------~~~~~~L~~~Gv~~~~~--G~~~------------------~~----~-~~~d~~~~L~~~a~~~~gV~i~ 179 (344)
T 3jsk_A 134 ---------KPADVFLDEVGVPYEDE--GDYV------------------VV----K-HAALFTSTVLSKVLQRPNVKLF 179 (344)
T ss_dssp ---------TTTHHHHHHHTCCCEEC--SSEE------------------EE----S-CHHHHHHHHHHHHHTCTTEEEE
T ss_pred ---------hHHHHHHHHcCCccccc--CCeE------------------EE----e-cHHHHHHHHHHHHHhCCCCEEE
Confidence 12245677889887642 1111 00 0 124677888888888 599999
Q ss_pred EEEEEEEEEEccC----------------C--cEEEEEEEEc---CCC------eEEEEEcCeEEEccCCcCC
Q 046556 203 VEYFALDLIMNSD----------------G--TCQGVIALNM---EDG------TLHRFRAASTILATGGYGR 248 (633)
Q Consensus 203 ~~~~v~~L~~d~~----------------g--~v~Gv~~~~~---~~G------~~~~i~A~~VVlAtGg~~~ 248 (633)
.++.|++|+.+++ + +|.||++... .+| ....|+|+.||+|||+.+.
T Consensus 180 ~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 180 NATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGP 252 (344)
T ss_dssp ETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSS
T ss_pred eCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCch
Confidence 9999999998442 3 8999987531 122 3457999999999998774
No 40
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.38 E-value=1.7e-12 Score=139.76 Aligned_cols=63 Identities=21% Similarity=0.378 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHHHhCCCEEEEEE---EEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCCCC
Q 046556 183 GHALLHTLYGQAMKHNTQFFVEY---FALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYF 251 (633)
Q Consensus 183 g~~l~~~l~~~a~~~gv~i~~~~---~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~ 251 (633)
...++..|.+.+++.|++|++++ +|++|.. ++++++||.+ .+|+ .++||.||+|||+++..+.
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~-~~~~v~gV~t---~~G~--~i~Ad~VV~AtG~~s~~l~ 225 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIF-ENNDVKGAVT---ADGK--IWRAERTFLCAGASAGQFL 225 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEE-ETTEEEEEEE---TTTE--EEECSEEEECCGGGGGGTS
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEe-cCCeEEEEEE---CCCC--EEECCEEEECCCCChhhhc
Confidence 46788899999999999999999 9999998 6788988877 5675 4899999999999986443
No 41
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.38 E-value=9.7e-13 Score=143.55 Aligned_cols=34 Identities=29% Similarity=0.432 Sum_probs=32.5
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.+|||+|||||++|++||+.|++.|++|+|+||.
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 5799999999999999999999999999999994
No 42
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.38 E-value=4.1e-14 Score=154.30 Aligned_cols=36 Identities=31% Similarity=0.447 Sum_probs=33.2
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
..++||+|||||+||++||+.|++.|++|+|+||..
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 356999999999999999999999999999999863
No 43
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.38 E-value=1.6e-12 Score=141.83 Aligned_cols=37 Identities=32% Similarity=0.600 Sum_probs=33.6
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCC
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFP 81 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~ 81 (633)
+.++||+|||||++|++||+.|++.|++|+|+|+...
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~ 40 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKT 40 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3468999999999999999999999999999999643
No 44
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.36 E-value=8.7e-12 Score=132.53 Aligned_cols=189 Identities=16% Similarity=0.130 Sum_probs=106.9
Q ss_pred cccccEEEECCchHHHHHHHHHHh-CC-CcEEEEeecCCCCCcccccccceeeecCCCCcCCHHH------HHHHHHhcC
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSE-HG-FNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRW------HMYDTVKGS 116 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~-~G-~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~------~~~d~~~~~ 116 (633)
+.++||+|||||++|+++|+.|++ +| .+|+||||....++.+..+.|.+...... ...... .+.++....
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~~gas~~~~g~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~ 96 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAGGNMARNTTIIRSNYLW--DESAGIYEKSLKLWEQLPEDL 96 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTTCSGGGTSCCCBCCCCSS--HHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCCCCcccccCceeeecCCC--HHHHHHHHHHHHHHHHHHHHh
Confidence 457899999999999999999999 99 99999999876666665555554432211 100000 011111100
Q ss_pred C----CC--------CCHHHHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCccccc-CCCCccceeEEc--cCC
Q 046556 117 D----WL--------GDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDF-GKGGQAYRCACA--ADR 181 (633)
Q Consensus 117 ~----~~--------~~~~~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~-~~g~~~~r~~~~--~~~ 181 (633)
. +. .+++.. +......+++.+.|+++......... ..++...... ............ ...
T Consensus 97 ~~~~~~~~~g~l~~~~~~~~~----~~~~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 171 (405)
T 2gag_B 97 EYDFLFSQRGVLNLAHTLGDV----RESVRRVEANKLNGVDAEWLDPSQVK-EACPIINTSDDIRYPVMGATWQPRAGIA 171 (405)
T ss_dssp TCCCCCBCCCEEEEECSHHHH----HHHHHHHHHHHTBTCCCEEECHHHHH-HHCTTSCCSTTSSSCCCEEEEETTCBBC
T ss_pred CCCcCEecccEEEEEcCHHHH----HHHHHHHHHHHhcCCCceEeCHHHHH-hhCCCCcccccccccceeEEEeCCCccC
Confidence 0 00 011111 11223445556667655322111000 0000000000 000000011111 111
Q ss_pred chHHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 182 TGHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 182 ~g~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
....+...|.+.+++.|++++++++|++|.. ++++++++.+ .+| .+.||.||+|+|+++
T Consensus 172 ~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~-~~~~~~~v~~---~~g---~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 172 KHDHVAWAFARKANEMGVDIIQNCEVTGFIK-DGEKVTGVKT---TRG---TIHAGKVALAGAGHS 230 (405)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEE---TTC---CEEEEEEEECCGGGH
T ss_pred CHHHHHHHHHHHHHHCCCEEEcCCeEEEEEE-eCCEEEEEEe---CCc---eEECCEEEECCchhH
Confidence 3457888899999999999999999999998 5677877765 455 489999999999875
No 45
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.35 E-value=4.9e-12 Score=140.49 Aligned_cols=65 Identities=14% Similarity=0.154 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCC
Q 046556 183 GHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGR 248 (633)
Q Consensus 183 g~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 248 (633)
...++..+.+.+++.|++|+++++|++|.. ++++|+||.+.+..+|+...|+|+.||+|||.|+.
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~-~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~ 251 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLY-EGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVD 251 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHH
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEE-eCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHH
Confidence 457788888889999999999999999998 57789999887755676667999999999998873
No 46
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.34 E-value=1.8e-11 Score=126.58 Aligned_cols=125 Identities=22% Similarity=0.237 Sum_probs=77.9
Q ss_pred cccccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCH
Q 046556 43 IVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQ 122 (633)
Q Consensus 43 ~~~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~ 122 (633)
.....+||+|||||++|++||+.|+++|++|+|+|+... .....||......
T Consensus 18 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~----~~~~~gg~~~~~~------------------------ 69 (338)
T 3itj_A 18 GSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMA----NGIAAGGQLTTTT------------------------ 69 (338)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSB----TTBCTTCGGGGSS------------------------
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCC----CCCCcCcccccch------------------------
Confidence 344568999999999999999999999999999999531 0111122111000
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCCEEE
Q 046556 123 DAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFF 202 (633)
Q Consensus 123 ~~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv~i~ 202 (633)
.+. .+.+.+ ....+..+...+.+.+++.|++++
T Consensus 70 ----------------------~~~----------~~~~~~---------------~~~~~~~~~~~~~~~~~~~gv~i~ 102 (338)
T 3itj_A 70 ----------------------EIE----------NFPGFP---------------DGLTGSELMDRMREQSTKFGTEII 102 (338)
T ss_dssp ----------------------EEC----------CSTTCT---------------TCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred ----------------------hhc----------ccCCCc---------------ccCCHHHHHHHHHHHHHHcCCEEE
Confidence 000 000000 001235777788888888999999
Q ss_pred EEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 203 VEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 203 ~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
.++ |+++.. +++.+. +......++. .+.++.||+|||...
T Consensus 103 ~~~-v~~i~~-~~~~~~-v~~~~~~~~~--~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 103 TET-VSKVDL-SSKPFK-LWTEFNEDAE--PVTTDAIILATGASA 142 (338)
T ss_dssp CSC-EEEEEC-SSSSEE-EEETTCSSSC--CEEEEEEEECCCEEE
T ss_pred EeE-EEEEEE-cCCEEE-EEEEecCCCc--EEEeCEEEECcCCCc
Confidence 988 988877 445442 2221112333 478999999999854
No 47
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.34 E-value=4.9e-13 Score=145.19 Aligned_cols=36 Identities=36% Similarity=0.532 Sum_probs=33.0
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFP 81 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~ 81 (633)
.+|||+|||||+||++||+.|++.|.+|+|+||...
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~ 38 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGE 38 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSS
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCC
Confidence 468999999999999999999999999999997543
No 48
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.34 E-value=7.4e-13 Score=143.71 Aligned_cols=33 Identities=42% Similarity=0.618 Sum_probs=31.8
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
++||+|||||+||++||+.|++.|++|+|+||.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 489999999999999999999999999999997
No 49
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.34 E-value=1.2e-13 Score=150.04 Aligned_cols=34 Identities=26% Similarity=0.452 Sum_probs=32.2
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.+|||+|||||++|++||+.|+++|++|+|+||.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3689999999999999999999999999999994
No 50
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.33 E-value=1.7e-13 Score=149.23 Aligned_cols=35 Identities=26% Similarity=0.405 Sum_probs=32.8
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
.++||+|||||+||++||+.|++.|++|+|+||..
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46899999999999999999999999999999973
No 51
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.33 E-value=2.3e-11 Score=138.11 Aligned_cols=182 Identities=12% Similarity=0.120 Sum_probs=99.4
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCC-CcccccccceeeecCCCCcCCHHHHH-------HHHHhcCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTR-SHTVAAQGGINAALGNMTEDDWRWHM-------YDTVKGSD 117 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~-g~t~~~~Gg~~~~~~~~~~d~~~~~~-------~d~~~~~~ 117 (633)
..+||+|||||++|++||+.|+++|++|+|+||....+ +++....|.+...... ........+ .+....-.
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~ 349 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSK-HDEALNRFFSNAFTFARRFYDQLP 349 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCS-SCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCC-CccHHHHHHHHHHHHHHHHHHHCC
Confidence 34899999999999999999999999999999965444 4444444444322211 111111111 11111000
Q ss_pred --------C----CCCHHHHHHHHHHHHHHHHHHHHCCCccc---ccCCCcccccccCCcccccCCCCccceeEEc--cC
Q 046556 118 --------W----LGDQDAIQYMCREAPKAVIELENYGLPFS---RTEDGKIYQRAFGGQSLDFGKGGQAYRCACA--AD 180 (633)
Q Consensus 118 --------~----~~~~~~v~~~~~~~~~~~~~l~~~Gv~f~---~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~--~~ 180 (633)
+ ..+.. ..+.++++...|++.. ....... ....+ ..... + ..... ..
T Consensus 350 ~~~~~~~~g~l~~~~~~~--------~~~~~~~~~~~g~~~~~~~~l~~~~~-~~~~~-l~~~~--g----g~~~p~~g~ 413 (676)
T 3ps9_A 350 VKFDHDWCGVTQLGWDEK--------SQHKIAQMLSMDLPAELAVAVEANAV-EQITG-VATNC--S----GITYPQGGW 413 (676)
T ss_dssp SCCCEECCCEEEECCSHH--------HHHHHHHHHTSCCCTTTCEEECHHHH-HHHHS-SCCSS--C----EEEETTCEE
T ss_pred CCcCcCcCCeeeecCCHH--------HHHHHHHHHhcCCcHHHhhhCCHHHH-HHhhC-CCccC--C----cEEecCCee
Confidence 0 00111 1112233344454422 1000000 00000 00000 0 00000 01
Q ss_pred CchHHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCCCC
Q 046556 181 RTGHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYF 251 (633)
Q Consensus 181 ~~g~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~ 251 (633)
.....++..|.+.+++.|++|+++++|++|.. +++++ +|.+ .+|.. +.|+.||+|||+++..+.
T Consensus 414 v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~-~~~~v-~V~t---~~G~~--i~Ad~VVlAtG~~s~~l~ 477 (676)
T 3ps9_A 414 LCPAELTRNVLELAQQQGLQIYYQYQLQNFSR-KDDCW-LLNF---AGDQQ--ATHSVVVLANGHQISRFS 477 (676)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEESCCEEEEEE-ETTEE-EEEE---TTSCE--EEESEEEECCGGGGGCST
T ss_pred eCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEE-eCCeE-EEEE---CCCCE--EECCEEEECCCcchhccc
Confidence 13468889999999999999999999999998 55653 4443 45554 899999999999976443
No 52
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.33 E-value=3.2e-12 Score=134.83 Aligned_cols=57 Identities=12% Similarity=0.088 Sum_probs=46.7
Q ss_pred hHHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 183 GHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 183 g~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
...+...|.+.+++.|++++++++|++|.. +++++ ++.+ .+| .+.||.||+|+|.++
T Consensus 163 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~-~~~~~-~v~~---~~g---~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 163 PYFVCKAYVKAAKMLGAEIFEHTPVLHVER-DGEAL-FIKT---PSG---DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCCCEEEC-SSSSE-EEEE---TTE---EEEEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCcEEEEEE-ECCEE-EEEc---CCc---eEEcCEEEECCChhH
Confidence 467888999999999999999999999987 55665 5543 444 489999999999876
No 53
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.31 E-value=3.4e-11 Score=136.95 Aligned_cols=63 Identities=19% Similarity=0.063 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCCCC
Q 046556 183 GHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYF 251 (633)
Q Consensus 183 g~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~ 251 (633)
...++..|.+.+++.|++|+++++|++|.. +++++ +|.+ .+|+ ..+.|+.||+|+|+++..+.
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~-~~~~v-~V~t---~~G~-~~i~Ad~VVlAtG~~s~~l~ 473 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKR-IDSQW-QLTF---GQSQ-AAKHHATVILATGHRLPEWE 473 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEE-CSSSE-EEEE---C-CC-CCEEESEEEECCGGGTTCST
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEE-eCCeE-EEEe---CCCc-EEEECCEEEECCCcchhccc
Confidence 468889999999999999999999999998 45553 4443 4453 13899999999999976443
No 54
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.29 E-value=1.4e-11 Score=133.26 Aligned_cols=65 Identities=15% Similarity=0.138 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRA 249 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 249 (633)
..+...|.+.+.+.|++++.+++|+++.. ++++|+||.+.+..+|+...+.||.||.|+|..+..
T Consensus 100 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~-~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 100 PLYNQRVLKEAQDRGVEIWDLTTAMKPIF-EDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTT
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEE-ECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhh
Confidence 56788888988889999999999999998 678898988865226776679999999999998754
No 55
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.29 E-value=1.9e-11 Score=124.39 Aligned_cols=144 Identities=19% Similarity=0.314 Sum_probs=96.7
Q ss_pred ccccEEEECCchHHHHHHHHHHhC--CCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHH
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEH--GFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQD 123 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~--G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~ 123 (633)
.++||+|||||++|++||+.|+++ |.+|+|+|+....++++.. .+...... ...
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~-~g~~~~~~---------------------~~~-- 119 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL-GGQLFSAM---------------------VMR-- 119 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC-CGGGCCCE---------------------EEE--
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccc-cCcccchh---------------------hhh--
Confidence 467999999999999999999998 9999999997665444322 11111000 000
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhC-CCEEE
Q 046556 124 AIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKH-NTQFF 202 (633)
Q Consensus 124 ~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~-gv~i~ 202 (633)
.+...++.++|++|... +.++. ......+...|.+.+.+. |++++
T Consensus 120 ---------~~~~~~L~~~Gv~~~~~--g~~~~-----------------------~~~~~~~~~~L~~~a~~~~GV~i~ 165 (326)
T 2gjc_A 120 ---------KPAHLFLQELEIPYEDE--GDYVV-----------------------VKHAALFISTVLSKVLQLPNVKLF 165 (326)
T ss_dssp ---------TTTHHHHHHTTCCCEEC--SSEEE-----------------------ESCHHHHHHHHHHHHHTSTTEEEE
T ss_pred ---------hHHHHHHHhhCcccccC--CCeEE-----------------------EcchHHHHHHHHHHHHHhcCcEEE
Confidence 11245677889988643 21111 002356778888888885 99999
Q ss_pred EEEEEEEEEEcc--C-C--cEEEEEEEEc---CCC------eEEEEEc---------------CeEEEccCCcC
Q 046556 203 VEYFALDLIMNS--D-G--TCQGVIALNM---EDG------TLHRFRA---------------ASTILATGGYG 247 (633)
Q Consensus 203 ~~~~v~~L~~d~--~-g--~v~Gv~~~~~---~~G------~~~~i~A---------------~~VVlAtGg~~ 247 (633)
.++.|++|+.++ + + +|+||++... .+| ....|.| +.||+|||.-+
T Consensus 166 ~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~ 239 (326)
T 2gjc_A 166 NATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDG 239 (326)
T ss_dssp TTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC-
T ss_pred ecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCc
Confidence 999999999843 3 5 9999987421 122 3346899 99999999654
No 56
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.28 E-value=4e-11 Score=131.29 Aligned_cols=64 Identities=14% Similarity=0.094 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCC
Q 046556 183 GHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGR 248 (633)
Q Consensus 183 g~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 248 (633)
...+...|.+.+++.|++++++++|++|.. ++ ++++|.+.+..+|+...++||.||+|+|.++.
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~-~~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARR-EN-GLWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEE-ET-TEEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEE-eC-CEEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 467889999999999999999999999988 44 68888887655777667999999999998863
No 57
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.28 E-value=3.6e-12 Score=138.49 Aligned_cols=35 Identities=40% Similarity=0.671 Sum_probs=32.6
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeecCC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFP 81 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~ 81 (633)
++||+|||||+||++||+.|++.|++|+|+|+...
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~ 36 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGA 36 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 48999999999999999999999999999999743
No 58
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.28 E-value=3.6e-12 Score=138.53 Aligned_cols=37 Identities=38% Similarity=0.592 Sum_probs=33.5
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPT 82 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~ 82 (633)
.++||+|||||+||++||+.|++.|++|+|+|+....
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGAL 41 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 3589999999999999999999999999999997443
No 59
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.28 E-value=1.3e-13 Score=150.68 Aligned_cols=36 Identities=22% Similarity=0.217 Sum_probs=33.3
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
..+|||+|||||+||++||+.|++.|++|+|+||..
T Consensus 6 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 6 VINVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 346999999999999999999999999999999964
No 60
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.27 E-value=2.9e-10 Score=116.66 Aligned_cols=36 Identities=39% Similarity=0.675 Sum_probs=32.9
Q ss_pred ccccccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 44 VDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 44 ~~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
|+.++||+|||||++|++||+.|++.|++|+|+||.
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 48 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA 48 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 345789999999999999999999999999999995
No 61
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.27 E-value=6.2e-12 Score=128.63 Aligned_cols=33 Identities=27% Similarity=0.467 Sum_probs=31.3
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEE-Eeec
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTAC-ITKL 79 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~v-lEk~ 79 (633)
.+||+|||||+||++||..|+++|.+|+| +||.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 47999999999999999999999999999 9994
No 62
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.27 E-value=9.2e-12 Score=133.85 Aligned_cols=50 Identities=12% Similarity=0.012 Sum_probs=36.6
Q ss_pred HhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCC
Q 046556 195 MKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGR 248 (633)
Q Consensus 195 ~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 248 (633)
++.+++++.+++|+.+.. +...+ .+.+..+++...+.+|++|||||+...
T Consensus 68 ~~~~i~~~~~~~V~~id~-~~~~~---~~~~~~~~~~~~~~yd~lVIATGs~p~ 117 (437)
T 4eqs_A 68 DRKQITVKTYHEVIAIND-ERQTV---SVLNRKTNEQFEESYDKLILSPGASAN 117 (437)
T ss_dssp HHHCCEEEETEEEEEEET-TTTEE---EEEETTTTEEEEEECSEEEECCCEEEC
T ss_pred HhcCCEEEeCCeEEEEEc-cCcEE---EEEeccCCceEEEEcCEEEECCCCccc
Confidence 456999999999999865 33332 233335667777999999999998654
No 63
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.27 E-value=2.1e-11 Score=129.15 Aligned_cols=61 Identities=23% Similarity=0.236 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..+...|.+.+++.|++++.+++|+++.. ++++++||.+.+ .+....+.||.||.|+|.++
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~~~~v~gv~~~~--~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIK-ENGKVAGAKIRH--NNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEE-ETTEEEEEEEEE--TTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEE-eCCEEEEEEEEE--CCeEEEEEcCEEEECCCcch
Confidence 56778888989889999999999999998 678898888864 34445699999999999775
No 64
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.27 E-value=5.9e-12 Score=136.27 Aligned_cols=33 Identities=33% Similarity=0.431 Sum_probs=31.8
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
++||+|||||+||++||..|++.|++|+|+||.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 589999999999999999999999999999997
No 65
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.26 E-value=5.8e-12 Score=137.63 Aligned_cols=33 Identities=33% Similarity=0.543 Sum_probs=31.2
Q ss_pred ccccEEEECCchHHHHHHHHHHh-CCCcEEEEee
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSE-HGFNTACITK 78 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~-~G~~V~vlEk 78 (633)
.++||+|||||+||++||+.|++ .|++|+|+|+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 46899999999999999999999 9999999994
No 66
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.26 E-value=2.4e-12 Score=140.31 Aligned_cols=36 Identities=44% Similarity=0.674 Sum_probs=33.2
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFP 81 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~ 81 (633)
.++||+|||||++|++||+.|++.|++|+|+||...
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 39 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGK 39 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 468999999999999999999999999999999543
No 67
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.26 E-value=3.3e-11 Score=132.38 Aligned_cols=64 Identities=16% Similarity=0.125 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRA 249 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 249 (633)
..+...|.+.+++.|++++++++|+++.. ++++++||.+.+ .+|+...+.||.||.|+|..+.+
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~-~~~~v~gv~~~~-~dG~~~~i~ad~VI~AdG~~S~v 174 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLF-EGERAVGVRYRN-TEGVELMAHARFIVDASGNRTRV 174 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEE-ETTEEEEEEEEC-SSSCEEEEEEEEEEECCCTTCSS
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEE-ECCEEEEEEEEe-CCCCEEEEEcCEEEECCCcchHH
Confidence 57788899999899999999999999998 678899988764 56776679999999999988754
No 68
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.26 E-value=1.6e-11 Score=126.66 Aligned_cols=45 Identities=22% Similarity=0.319 Sum_probs=38.5
Q ss_pred CcccCeeeecccccccccCCCCCChhhHHHHHHHHHHHHHHHHHHhC
Q 046556 419 EVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQR 465 (633)
Q Consensus 419 T~ipGLyAaGe~a~~g~~Ga~rlgg~~l~~a~~~G~~Ag~~aa~~~~ 465 (633)
|++|||||+||++ +.++|.+|+|- .++.++.+|+.||+.|.++++
T Consensus 281 t~vpGv~aaGDaa-~~v~g~~rmGp-~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 281 AGVDNMYFAGMEV-AELDGLNRMGP-TFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp TTSBTEEECTHHH-HHHHTCCBCCS-CCHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCEEEEchHh-ccccCCCcCch-HHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999998 68999999874 345567899999999998874
No 69
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.26 E-value=8.2e-12 Score=136.32 Aligned_cols=33 Identities=39% Similarity=0.583 Sum_probs=30.9
Q ss_pred ccccEEEECCchHHHHHHHHHHh-CCCcEEEEee
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSE-HGFNTACITK 78 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~-~G~~V~vlEk 78 (633)
.+|||+|||||++|++||+.|++ .|++|+|+|+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 35899999999999999999999 9999999993
No 70
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.25 E-value=3e-11 Score=130.36 Aligned_cols=60 Identities=12% Similarity=0.262 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHHHhCCCEEEEEEEEEEEEEc--------------cCCcEEEEEEEEcCCCeEEEE--EcCeEEEccCCc
Q 046556 183 GHALLHTLYGQAMKHNTQFFVEYFALDLIMN--------------SDGTCQGVIALNMEDGTLHRF--RAASTILATGGY 246 (633)
Q Consensus 183 g~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d--------------~~g~v~Gv~~~~~~~G~~~~i--~A~~VVlAtGg~ 246 (633)
...+...|.+.+++.|++++++++|++|..+ +++++++|.+ .+| .+ .|+.||+|+|++
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t---~~g---~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVL---SDG---TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEE---TTS---CEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEe---CCC---EEeecCCEEEECCCcC
Confidence 4688889999999999999999999999872 2456667665 556 37 999999999988
Q ss_pred CC
Q 046556 247 GR 248 (633)
Q Consensus 247 ~~ 248 (633)
+.
T Consensus 254 s~ 255 (448)
T 3axb_A 254 SN 255 (448)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 71
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.24 E-value=5e-12 Score=133.10 Aligned_cols=181 Identities=18% Similarity=0.109 Sum_probs=98.6
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCC-CcccccccceeeecCCCCcCCHHHH---HHHHHhcC-CC-
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTR-SHTVAAQGGINAALGNMTEDDWRWH---MYDTVKGS-DW- 118 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~-g~t~~~~Gg~~~~~~~~~~d~~~~~---~~d~~~~~-~~- 118 (633)
+.++||+|||||++|+++|+.|+ +|++|+||||....+ +.+..+.|.+....+ .+..... ..+....- ..
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g~~as~~~~g~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~ 82 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPGYHSTGRSAAHYTVAYG---TPQVRALTAASRAFFDNPPAGF 82 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTTSSGGGSCCCEECSSSS---CHHHHHHHHHHHHHHHSCCTTS
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCccccccccccceeecccC---CHHHHHHHHHHHHHHHHhhhhh
Confidence 45689999999999999999999 699999999985444 444444333322221 1111111 11111100 00
Q ss_pred -----C--------CCHHHHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEcc---CCc
Q 046556 119 -----L--------GDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAA---DRT 182 (633)
Q Consensus 119 -----~--------~~~~~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~---~~~ 182 (633)
+ ...+. .+......+++...|+++......... ..++...... .....+.. ...
T Consensus 83 ~~~~~~~~~g~l~~~~~~~----~~~~~~~~~~~~~~g~~~~~l~~~~~~-~~~p~l~~~~-----~~~~~~~~~~~~~~ 152 (381)
T 3nyc_A 83 CEHPLLSPRPEMVVDFSDD----PEELRRQYESGKALVPQMRLLDAEQAC-SIVPVLRRDK-----VFGATYDPTGADID 152 (381)
T ss_dssp CSSCSEEECCEEEECSSCC----HHHHHHHHHHHHHHCTTCEEECHHHHH-HHSTTBCGGG-----CCCEEEETTCEEEC
T ss_pred CCcccccccceEEEechHH----HHHHHHHHHHHHHcCCCcEEeCHHHHH-HhCCCccccc-----ceEEEEcCCCceEC
Confidence 0 00000 111223344455566654322111000 0000000000 00000100 012
Q ss_pred hHHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 183 GHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 183 g~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
...++..|.+.+++.|++++++++|++|.. +++. ++|.+ .+| .++|+.||+|+|+++
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~-~~~~-~~V~t---~~g---~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRR-VDGA-WEVRC---DAG---SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEE-ETTE-EEEEC---SSE---EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEE-eCCe-EEEEe---CCC---EEEcCEEEECCChhH
Confidence 467889999999999999999999999998 4554 44443 444 489999999999886
No 72
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.23 E-value=1e-10 Score=129.16 Aligned_cols=52 Identities=19% Similarity=0.247 Sum_probs=44.2
Q ss_pred HhCCCEEEEEEEEEEEEEcc---CCcEEEEEEEEcCCCeEEEEEcC-eEEEccCCcC
Q 046556 195 MKHNTQFFVEYFALDLIMNS---DGTCQGVIALNMEDGTLHRFRAA-STILATGGYG 247 (633)
Q Consensus 195 ~~~gv~i~~~~~v~~L~~d~---~g~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~~ 247 (633)
.+.|++|++++.|++|+.|+ +++++||.+.+ .+|+.+.++|+ .||||+|+++
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~-~~G~~~~v~A~kEVILsAGa~~ 293 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGT-HKGNTHNVYAKHEVLLAAGSAV 293 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSCEEEEEEEES-STTCEEEEEEEEEEEECSCTTT
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEe-cCCcEEEEEECCEEEEeCCccC
Confidence 46799999999999999942 67999999864 47888889996 5999999986
No 73
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.22 E-value=2.7e-11 Score=134.87 Aligned_cols=65 Identities=25% Similarity=0.408 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEc---CCCeE-------EEEEcCeEEEccCCcCC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNM---EDGTL-------HRFRAASTILATGGYGR 248 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~---~~G~~-------~~i~A~~VVlAtGg~~~ 248 (633)
..+...|.+++++.|++|+.++.|++|..+++++|+||.+.+. .+|+. ..++||.||+|+|+++.
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 5788889999999999999999999999855578999877421 24532 36899999999999874
No 74
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.22 E-value=2.1e-10 Score=121.68 Aligned_cols=56 Identities=21% Similarity=0.328 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..++..|.+.+++.|++++++++|++|.. +++.+. | .. .+| .++|+.||+|+|+++
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~-~~~~v~-v--~t-~~g---~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVP-DADGVS-V--TT-DRG---TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEE-ETTEEE-E--EE-SSC---EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEE-cCCeEE-E--EE-CCC---EEEcCEEEEcCCcCh
Confidence 56788899999999999999999999988 455432 3 22 344 489999999999885
No 75
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.22 E-value=4.3e-11 Score=129.66 Aligned_cols=34 Identities=26% Similarity=0.445 Sum_probs=32.4
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.++||+|||||++|++||.+|++.|++|+|+|+.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK 36 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC
Confidence 4689999999999999999999999999999997
No 76
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.22 E-value=1.1e-11 Score=125.52 Aligned_cols=33 Identities=27% Similarity=0.372 Sum_probs=31.5
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
+||+|||||+||++||..|++.|.+|+|+||..
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 799999999999999999999999999999963
No 77
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.20 E-value=2.5e-11 Score=131.62 Aligned_cols=34 Identities=32% Similarity=0.528 Sum_probs=32.4
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
++||+|||||+||++||..|++.|.+|+|+|+..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5899999999999999999999999999999975
No 78
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.19 E-value=6.3e-10 Score=104.06 Aligned_cols=55 Identities=22% Similarity=0.192 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCc
Q 046556 183 GHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGY 246 (633)
Q Consensus 183 g~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 246 (633)
+..+...+.+.+++.|++++.+ +|+++.. +++.+ .+.+ .+| .+.||.||+|+|..
T Consensus 55 ~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~-~~~~~-~v~~---~~g---~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 55 GEELLRRLEAHARRYGAEVRPG-VVKGVRD-MGGVF-EVET---EEG---VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CCCEEEE-CSSSE-EEEC---SSC---EEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHHcCCEEEeC-EEEEEEE-cCCEE-EEEE---CCC---EEEECEEEECCCCC
Confidence 3567778888888999999999 9999987 34432 2222 455 48999999999943
No 79
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.19 E-value=2.1e-12 Score=141.36 Aligned_cols=34 Identities=32% Similarity=0.517 Sum_probs=32.2
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
++||+|||||+||++||..|++.|++|+|+|+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899999999999999999999999999999973
No 80
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.18 E-value=9.2e-12 Score=136.32 Aligned_cols=34 Identities=24% Similarity=0.205 Sum_probs=32.1
Q ss_pred cccEEEECCchHHHHHHHHHHhC---CCcEEEEeecC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEH---GFNTACITKLF 80 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~---G~~V~vlEk~~ 80 (633)
++||+|||||++|++||+.|++. |++|+|+||..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 47999999999999999999999 99999999975
No 81
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.18 E-value=8.9e-11 Score=131.19 Aligned_cols=51 Identities=14% Similarity=0.027 Sum_probs=38.0
Q ss_pred HHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 193 QAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 193 ~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
.+++.+++++.++.|+++.. +++.+ .+.+..+|+...+.+|.||+|||+..
T Consensus 102 ~~~~~gi~v~~~~~V~~id~-~~~~v---~v~~~~~g~~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 102 MSKRFNLDIRVLSEVVKINK-EEKTI---TIKNVTTNETYNEAYDVLILSPGAKP 152 (588)
T ss_dssp HHHHTTCEEECSEEEEEEET-TTTEE---EEEETTTCCEEEEECSEEEECCCEEE
T ss_pred HHHhcCcEEEECCEEEEEEC-CCCEE---EEeecCCCCEEEEeCCEEEECCCCCC
Confidence 34567999999999999976 44433 34444567766789999999999754
No 82
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.17 E-value=1.9e-10 Score=127.82 Aligned_cols=61 Identities=18% Similarity=0.081 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..+...|.+.+++.|++++++++|+++.. +++.+++|.+.+ +|+...+.|+.||.|+|..+
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~-~~g~~~~V~~~~--~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDL-SDPDRVVLTVRR--GGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEC-CSTTCEEEEEEE--TTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEE-cCCCEEEEEEec--CCceEEEEcCEEEECCCCcc
Confidence 57788888899999999999999999988 467777887753 67666799999999999765
No 83
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.17 E-value=3.7e-11 Score=139.61 Aligned_cols=182 Identities=14% Similarity=0.115 Sum_probs=102.6
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCC-cEEEEeecCCC--CCcccccccceeeecCCCCcCCH-HHH---HHHHHhc-C-
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGF-NTACITKLFPT--RSHTVAAQGGINAALGNMTEDDW-RWH---MYDTVKG-S- 116 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~~~~--~g~t~~~~Gg~~~~~~~~~~d~~-~~~---~~d~~~~-~- 116 (633)
.++||+|||||++|+++|+.|+++|. +|+||||.... ++++..+. |+..... .... ... ..+.... .
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~~~~gss~~~~-G~~~~~~---~~~~~~~l~~~s~~~~~~l~~ 78 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAP-GLVFQTN---PSKTMASFAKYTVEKLLSLTE 78 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTTCCCSGGGTCC-CEECCCC---SCHHHHHHHHHHHHHHHHCEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCCCCcccceeCC-ceeecCC---CCHHHHHHHHHHHHHHHHHHh
Confidence 46899999999999999999999998 99999998653 34444333 3322111 1111 000 0011110 0
Q ss_pred ---------CC---CCCHHHHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEcc-C--C
Q 046556 117 ---------DW---LGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAA-D--R 181 (633)
Q Consensus 117 ---------~~---~~~~~~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~-~--~ 181 (633)
.. ..+++... ......+++..+|+++......... ..++..... ......+.. + .
T Consensus 79 ~~~~~~~~~G~l~~~~~~~~~~----~l~~~~~~~~~~G~~~~~l~~~e~~-~~~p~l~~~-----~~~gg~~~~~~g~v 148 (830)
T 1pj5_A 79 DGVSCFNQVGGLEVATTETRLA----DLKRKLGYAAAWGIEGRLLSPAECQ-ELYPLLDGE-----NILGGLHVPSDGLA 148 (830)
T ss_dssp TTEESEECCCEEEEESSHHHHH----HHHHHHHHHHHHTCCCEEECHHHHH-HHCTTSCGG-----GCCEEEEETTCEEE
T ss_pred hCCCCeeecCcEEEEeCHHHHH----HHHHHHHHHHHcCCCeEEECHHHHH-HhCccCCcc-----ceEEEEEECCCceE
Confidence 00 01222211 1222344555667654322111000 000000000 000001110 0 1
Q ss_pred chHHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCC
Q 046556 182 TGHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGR 248 (633)
Q Consensus 182 ~g~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 248 (633)
....++..|.+.+++.|++|+++++|++|.. +++++++|.+ .+| .+.|+.||+|+|+++.
T Consensus 149 ~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~-~~~~v~~V~t---~~G---~i~Ad~VV~AaG~~s~ 208 (830)
T 1pj5_A 149 SAARAVQLLIKRTESAGVTYRGSTTVTGIEQ-SGGRVTGVQT---ADG---VIPADIVVSCAGFWGA 208 (830)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEE---TTE---EEECSEEEECCGGGHH
T ss_pred cHHHHHHHHHHHHHHcCCEEECCceEEEEEE-eCCEEEEEEE---CCc---EEECCEEEECCccchH
Confidence 3467889999999999999999999999998 5777777765 455 4899999999999863
No 84
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.16 E-value=2.2e-11 Score=132.39 Aligned_cols=36 Identities=39% Similarity=0.565 Sum_probs=33.2
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFP 81 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~ 81 (633)
.++||+|||||+||++||..|++.|++|+|+|+...
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 40 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNET 40 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 458999999999999999999999999999999743
No 85
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=99.16 E-value=4.7e-11 Score=131.97 Aligned_cols=52 Identities=33% Similarity=0.475 Sum_probs=43.7
Q ss_pred HhCCCEEEEEEEEEEEEEcc-CCcEEEEEEEEcCCCeEEEEEc-CeEEEccCCcC
Q 046556 195 MKHNTQFFVEYFALDLIMNS-DGTCQGVIALNMEDGTLHRFRA-ASTILATGGYG 247 (633)
Q Consensus 195 ~~~gv~i~~~~~v~~L~~d~-~g~v~Gv~~~~~~~G~~~~i~A-~~VVlAtGg~~ 247 (633)
.+.|++|++++.|++|+.|+ +++++||.+.+ .+|+.+.++| |.||||+|+++
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~-~~g~~~~v~A~keVILsaGa~~ 270 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVT-AAGNELNFFADREVILSQGVFE 270 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEE-TTSCEEEEEEEEEEEECSHHHH
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEe-CCCcEEEEEeeeEEEEcccccC
Confidence 35699999999999999942 68999999976 3577788999 56999999975
No 86
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.16 E-value=2e-10 Score=120.54 Aligned_cols=60 Identities=13% Similarity=0.198 Sum_probs=47.2
Q ss_pred hHHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCCC
Q 046556 183 GHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAY 250 (633)
Q Consensus 183 g~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 250 (633)
...++..|.+.+++.|++++++++|++|.. +++.+ .+.+ .+|+ +.||.||+|+|+++..+
T Consensus 148 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~-~~~~~-~v~~---~~g~---~~a~~vV~a~G~~s~~l 207 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQLFNCPVTAIRH-DDDGV-TIET---ADGE---YQAKKAIVCAGTWVKDL 207 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-CSSSE-EEEE---SSCE---EEEEEEEECCGGGGGGT
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEE-cCCEE-EEEE---CCCe---EEcCEEEEcCCccHHhh
Confidence 457888899999999999999999999988 44443 3332 4553 89999999999987544
No 87
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.16 E-value=5.2e-11 Score=128.58 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=32.3
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.++||+|||||++|++||.+|++.|++|+|+|+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK 36 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC
Confidence 4689999999999999999999999999999997
No 88
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.15 E-value=1.1e-10 Score=125.94 Aligned_cols=34 Identities=21% Similarity=0.344 Sum_probs=31.2
Q ss_pred cccEEEECCchHHHHHHHHHHhC--CCcEEEEeecC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEH--GFNTACITKLF 80 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~--G~~V~vlEk~~ 80 (633)
.+||+|||||+||++||..|++. |.+|+|+|+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 36899999999999999999997 78999999974
No 89
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.15 E-value=8e-11 Score=124.24 Aligned_cols=35 Identities=23% Similarity=0.234 Sum_probs=31.6
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
+++.|+|||||+||++||..|...+.+|+|+|+..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~ 42 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEK 42 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCC
Confidence 45779999999999999999987889999999964
No 90
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.15 E-value=2e-10 Score=122.66 Aligned_cols=61 Identities=16% Similarity=0.043 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..+...|.+.+++.|++++++++|+++..+ ++.++ +.+.+ .+|+...++||.||.|+|..+
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~~~-v~v~~-~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFF-GTDSV-TTIED-INGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEE-TTEEE-EEEEE-TTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEe-CCEEE-EEEEc-CCCCEEEEEcCEEEECCCCch
Confidence 577888888898889999999999999884 44332 23332 678777799999999999776
No 91
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.14 E-value=1.2e-10 Score=128.10 Aligned_cols=36 Identities=25% Similarity=0.361 Sum_probs=33.6
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
..++||+|||||++|++||+.|++.|++|+|+|+..
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 76 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 76 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 456899999999999999999999999999999975
No 92
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.14 E-value=2.8e-10 Score=120.06 Aligned_cols=184 Identities=16% Similarity=0.220 Sum_probs=96.5
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCC--CcccccccceeeecCCCCcCCHHH------HHHHHHhc-C-
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTR--SHTVAAQGGINAALGNMTEDDWRW------HMYDTVKG-S- 116 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~--g~t~~~~Gg~~~~~~~~~~d~~~~------~~~d~~~~-~- 116 (633)
++||+|||||++|+++|+.|+++|++|+||||..... +.+..+.+.+....+. ....... .+.++... +
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~l~~~~~~ 81 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGE-GREYVPLALRSQELWYELEKETHH 81 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTT-CGGGHHHHHHHHHHHHHHHHHCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcC-CchHHHHHHHHHHHHHHHHHHhCC
Confidence 5899999999999999999999999999999986554 3333222222111111 0011110 01111110 0
Q ss_pred CCC--------CCHHHHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccC--CchHHH
Q 046556 117 DWL--------GDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAAD--RTGHAL 186 (633)
Q Consensus 117 ~~~--------~~~~~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~--~~g~~l 186 (633)
..+ ...+.. ......++++...|+++......... ..+++.... ......+...+ .....+
T Consensus 82 ~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~~----~~~~~~~~~~~~~~~~~~~ 152 (389)
T 2gf3_A 82 KIFTKTGVLVFGPKGES----AFVAETMEAAKEHSLTVDLLEGDEIN-KRWPGITVP----ENYNAIFEPNSGVLFSENC 152 (389)
T ss_dssp CCEECCCEEEEEETTCC----HHHHHHHHHHHHTTCCCEEEETHHHH-HHSTTCCCC----TTEEEEEETTCEEEEHHHH
T ss_pred cceeecceEEEcCCCch----HHHHHHHHHHHHcCCCcEEcCHHHHH-HhCCCcccC----CCceEEEeCCCcEEeHHHH
Confidence 000 000000 01122234555667654322111110 001110000 00000011000 123678
Q ss_pred HHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCC
Q 046556 187 LHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGR 248 (633)
Q Consensus 187 ~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 248 (633)
+..|.+.+++.|++++++++|++|.. +++.+ .+.+ .+| .+.|+.||+|+|.++.
T Consensus 153 ~~~l~~~~~~~Gv~i~~~~~v~~i~~-~~~~~-~v~~---~~g---~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 153 IRAYRELAEARGAKVLTHTRVEDFDI-SPDSV-KIET---ANG---SYTADKLIVSMGAWNS 206 (389)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEE-CSSCE-EEEE---TTE---EEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHCCCEEEcCcEEEEEEe-cCCeE-EEEe---CCC---EEEeCEEEEecCccHH
Confidence 88999999999999999999999988 44443 2332 344 4899999999998763
No 93
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.13 E-value=2.5e-10 Score=126.03 Aligned_cols=63 Identities=25% Similarity=0.201 Sum_probs=47.3
Q ss_pred hHHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEE--EEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 183 GHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGV--IALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 183 g~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv--~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
...+...|.+.+++.|++++++++|+++..++++++.++ .+.+ .++ ...++|+.||.|+|+++
T Consensus 119 ~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~-~~~-~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 119 QDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAG-PDG-EYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEE-TTE-EEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEc-CCC-eEEEEeCEEEECCCCcc
Confidence 357788899999999999999999999998444333333 3333 223 45799999999999876
No 94
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.11 E-value=2.1e-10 Score=124.44 Aligned_cols=34 Identities=29% Similarity=0.461 Sum_probs=32.4
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.++||+|||||++|++||++|++.|++|+|+|+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999999999999999999999997
No 95
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.11 E-value=9.1e-10 Score=120.25 Aligned_cols=157 Identities=22% Similarity=0.226 Sum_probs=89.9
Q ss_pred ccccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHH
Q 046556 44 VDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQD 123 (633)
Q Consensus 44 ~~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~ 123 (633)
++.++||+|||||++||++|+.|+++|.+|+|+||......... +.. +.
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r----~~~--l~------------------------- 56 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESR----GLG--FT------------------------- 56 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCC----SEE--EC-------------------------
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCC----cce--EC-------------------------
Confidence 45679999999999999999999999999999999744321110 110 00
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCC-CCccceeEEccCCchHHHHHHHHHHHHhCCCEEE
Q 046556 124 AIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGK-GGQAYRCACAADRTGHALLHTLYGQAMKHNTQFF 202 (633)
Q Consensus 124 ~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~-g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv~i~ 202 (633)
+..++.|+++|+.-............+++....+.. ....+.... .....+...|.+.+++.|++++
T Consensus 57 ---------~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~l~~~L~~~~~~~gv~v~ 124 (500)
T 2qa1_A 57 ---------ARTMEVFDQRGILPRFGEVETSTQGHFGGLPIDFGVLEGAWQAAKT---VPQSVTETHLEQWATGLGADIR 124 (500)
T ss_dssp ---------HHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEEGGGSTTGGGCEEE---EEHHHHHHHHHHHHHHTTCEEE
T ss_pred ---------HHHHHHHHHCCCHHHHHhccccccccccceecccccCCCCCCceee---cCHHHHHHHHHHHHHHCCCEEE
Confidence 011222334443211000000000001111111000 000000000 0124677888888888999999
Q ss_pred EEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 203 VEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 203 ~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
.+++|+++.. +++.|+ +.+.+ .+| ...++|+.||.|+|+.+
T Consensus 125 ~~~~v~~i~~-~~~~v~-v~~~~-~~g-~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 125 RGHEVLSLTD-DGAGVT-VEVRG-PEG-KHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp ETCEEEEEEE-ETTEEE-EEEEE-TTE-EEEEEESEEEECCCTTC
T ss_pred CCcEEEEEEE-cCCeEE-EEEEc-CCC-CEEEEeCEEEECCCcch
Confidence 9999999988 455554 55544 344 45699999999999887
No 96
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.10 E-value=3.2e-10 Score=125.67 Aligned_cols=60 Identities=15% Similarity=0.049 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..+...|.+.+++.|++|+.+++|+++.. +++.++ +.+.+ .+|+ ..++|+.||.|+|+.+
T Consensus 148 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~-~~~~v~-v~~~~-~~G~-~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 148 SRTEALLAEHAREAGAEIPRGHEVTRLRQ-DAEAVE-VTVAG-PSGP-YPVRARYGVGCDGGRS 207 (570)
T ss_dssp HHHHHHHHHHHHHHTEECCBSCEEEECCB-CSSCEE-EEEEE-TTEE-EEEEESEEEECSCSSC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEE-cCCeEE-EEEEe-CCCc-EEEEeCEEEEcCCCCc
Confidence 56778888888888999999999999988 444443 44332 4553 4699999999999876
No 97
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.10 E-value=6.1e-11 Score=126.24 Aligned_cols=57 Identities=23% Similarity=0.232 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHHHhCCCEEEEEEEEE---------EEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 183 GHALLHTLYGQAMKHNTQFFVEYFAL---------DLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 183 g~~l~~~l~~~a~~~gv~i~~~~~v~---------~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
...+...|.+.+++.|++++++++|+ +|.. +++++ +|.+ .+| .++||.||+|+|.++
T Consensus 171 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~-~~~~v-~v~~---~~g---~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTV-TNTHQ-IVVH---ETR---QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CB---CCE---EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEe-eCCeE-EEEE---CCc---EEECCEEEECCCccH
Confidence 35788899999999999999999999 8876 45555 4433 344 489999999999876
No 98
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.07 E-value=1.4e-09 Score=118.81 Aligned_cols=156 Identities=19% Similarity=0.218 Sum_probs=89.3
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHHH
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDA 124 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~ 124 (633)
+.++||+|||||++||++|+.|+++|.+|+|+||......... +.. + .
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r----~~~--l-----------------------~--- 57 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESR----GLG--F-----------------------T--- 57 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCC----SEE--E-----------------------C---
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCc----eeE--E-----------------------C---
Confidence 4568999999999999999999999999999999643321100 110 0 0
Q ss_pred HHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCC-ccceeEEccCCchHHHHHHHHHHHHhCCCEEEE
Q 046556 125 IQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGG-QAYRCACAADRTGHALLHTLYGQAMKHNTQFFV 203 (633)
Q Consensus 125 v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~-~~~r~~~~~~~~g~~l~~~l~~~a~~~gv~i~~ 203 (633)
+..++.|+.+|+.-............+++....+.... ..+.... .....+...|.+.+.+.|++|+.
T Consensus 58 --------~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~l~~~L~~~~~~~gv~v~~ 126 (499)
T 2qa2_A 58 --------ARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDFGVLEGAHYGVKA---VPQSTTESVLEEWALGRGAELLR 126 (499)
T ss_dssp --------HHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEGGGSTTCCCEEEE---EEHHHHHHHHHHHHHHTTCEEEE
T ss_pred --------HHHHHHHHHCCCHHHHHhccccccceecceecccccCCCCCCceEe---cCHHHHHHHHHHHHHhCCCEEEc
Confidence 11122334444421100000000000111111100000 0000000 01256778888888889999999
Q ss_pred EEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 204 EYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 204 ~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
+++|+++.. +++.|+ +.+.+ .+| ...++|+.||.|+|+.+
T Consensus 127 ~~~v~~i~~-~~~~v~-v~~~~-~~g-~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 127 GHTVRALTD-EGDHVV-VEVEG-PDG-PRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp SCEEEEEEE-CSSCEE-EEEEC-SSC-EEEEEEEEEEECCCTTC
T ss_pred CCEEEEEEE-eCCEEE-EEEEc-CCC-cEEEEeCEEEEccCccc
Confidence 999999988 445454 44433 344 35699999999999887
No 99
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.06 E-value=6.6e-10 Score=118.57 Aligned_cols=35 Identities=40% Similarity=0.597 Sum_probs=32.0
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCc--EEEEeecC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFN--TACITKLF 80 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~--V~vlEk~~ 80 (633)
..+||+|||||+||++||..|+++|.+ |+|+|+..
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 44 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREP 44 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCC
Confidence 458999999999999999999999987 99999964
No 100
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.06 E-value=5.1e-11 Score=128.72 Aligned_cols=34 Identities=29% Similarity=0.334 Sum_probs=31.4
Q ss_pred ccEEEECCchHHHHHHHHHHhC--CCcEEEEeecCC
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEH--GFNTACITKLFP 81 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~--G~~V~vlEk~~~ 81 (633)
.||+|||||+||++||..|++. |.+|+|+|+...
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 5899999999999999999998 899999999753
No 101
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.06 E-value=1.5e-09 Score=117.89 Aligned_cols=33 Identities=24% Similarity=0.233 Sum_probs=30.5
Q ss_pred ccEEEECCchHHHHHHHHHHhC--CCcEEEEeecC
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEH--GFNTACITKLF 80 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~--G~~V~vlEk~~ 80 (633)
.||+|||||+||++||..|++. |.+|+|+|+..
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~ 38 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQAS 38 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 5899999999999999999998 89999999974
No 102
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.05 E-value=7.9e-10 Score=119.36 Aligned_cols=33 Identities=18% Similarity=0.078 Sum_probs=30.9
Q ss_pred ccEEEECCchHHHHHHHHHHhC--CCcEEEEeecC
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEH--GFNTACITKLF 80 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~--G~~V~vlEk~~ 80 (633)
+||+|||||+||++||..|++. |.+|+|+|+..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMND 35 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 5899999999999999999998 99999999964
No 103
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.05 E-value=1.5e-09 Score=106.05 Aligned_cols=58 Identities=19% Similarity=0.188 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHhC-CCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCC
Q 046556 184 HALLHTLYGQAMKH-NTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGR 248 (633)
Q Consensus 184 ~~l~~~l~~~a~~~-gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 248 (633)
..+...|.+.+++. |++++ +++|+++.. ++++++++.+ .+|+ .+.||.||+|+|.++.
T Consensus 68 ~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~-~~~~v~~v~~---~~g~--~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 68 WAFHARAKYLLEGLRPLHLF-QATATGLLL-EGNRVVGVRT---WEGP--PARGEKVVLAVGSFLG 126 (232)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEE-ETTEEEEEEE---TTSC--CEECSEEEECCTTCSS
T ss_pred HHHHHHHHHHHHcCCCcEEE-EeEEEEEEE-eCCEEEEEEE---CCCC--EEECCEEEECCCCChh
Confidence 45667788888886 99998 579999988 5677777765 5665 4899999999998753
No 104
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.02 E-value=1.2e-10 Score=129.65 Aligned_cols=49 Identities=12% Similarity=0.083 Sum_probs=36.4
Q ss_pred HhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 195 MKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 195 ~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
++.|++++.+++|+++.. +++.+ .+.+..+|+...+.+|.||+|||+..
T Consensus 69 ~~~~i~~~~~~~V~~id~-~~~~v---~~~~~~~g~~~~~~~d~lviAtG~~p 117 (565)
T 3ntd_A 69 ARFNVEVRVKHEVVAIDR-AAKLV---TVRRLLDGSEYQESYDTLLLSPGAAP 117 (565)
T ss_dssp HHHCCEEETTEEEEEEET-TTTEE---EEEETTTCCEEEEECSEEEECCCEEE
T ss_pred HhcCcEEEECCEEEEEEC-CCCEE---EEEecCCCCeEEEECCEEEECCCCCC
Confidence 346999999999999976 44433 34444457666799999999999854
No 105
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.01 E-value=2.1e-10 Score=124.87 Aligned_cols=34 Identities=24% Similarity=0.344 Sum_probs=31.1
Q ss_pred ccEEEECCchHHHHHHHHHHhC--CCcEEEEeecCC
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEH--GFNTACITKLFP 81 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~--G~~V~vlEk~~~ 81 (633)
.||+|||||+||++||..|++. |.+|+|+|+...
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 72 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEI 72 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 5999999999999999999996 899999999643
No 106
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.01 E-value=6.3e-10 Score=121.42 Aligned_cols=142 Identities=21% Similarity=0.153 Sum_probs=87.8
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHHH
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDA 124 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~ 124 (633)
...+||+|||||++|+++|+.|++.|.+|+||||....++... . .. .+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~-----~--~~-----------------------~~-- 137 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNV-----L--HL-----------------------WP-- 137 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCE-----E--EC-----------------------CH--
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCc-----c--cC-----------------------Ch--
Confidence 3468999999999999999999999999999999754321100 0 00 00
Q ss_pred HHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCCEEEEE
Q 046556 125 IQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVE 204 (633)
Q Consensus 125 v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv~i~~~ 204 (633)
..++.+...|+.... +.+ ..... .. .....+...|.+.+++.|++++++
T Consensus 138 ---------~~~~~l~~~g~~~~~---~~~-----~~~~~---------~~-----~~~~~l~~~L~~~~~~~gv~v~~~ 186 (497)
T 2bry_A 138 ---------FTIHDLRALGAKKFY---GRF-----CTGTL---------DH-----ISIRQLQLLLLKVALLLGVEIHWG 186 (497)
T ss_dssp ---------HHHHHHHTTTHHHHC---TTT-----TCTTC---------CE-----EEHHHHHHHHHHHHHHTTCEEEES
T ss_pred ---------hHHHHHHHcCCcccc---ccc-----ccccc---------cc-----CCHHHHHHHHHHHHHhCCCEEEeC
Confidence 011122233321100 000 00000 00 122567788888888899999999
Q ss_pred EEEEEEEEcc-CCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCC
Q 046556 205 YFALDLIMNS-DGTCQGVIALNMEDGTLHRFRAASTILATGGYGRA 249 (633)
Q Consensus 205 ~~v~~L~~d~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 249 (633)
++|+++..++ ++..++|.+.+..+|+...+.||.||+|+|+.+..
T Consensus 187 ~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 187 VKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp CEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred CEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 9999998732 24445565532114533348999999999998743
No 107
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.00 E-value=4.2e-10 Score=122.77 Aligned_cols=34 Identities=21% Similarity=0.103 Sum_probs=31.8
Q ss_pred cccEEEECCchHHHHHHHHHHhCC---CcEEEEeecC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHG---FNTACITKLF 80 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G---~~V~vlEk~~ 80 (633)
++||+|||||+||++||..|++.| .+|+|+|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCC
Confidence 589999999999999999999988 9999999964
No 108
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.99 E-value=1.8e-09 Score=114.48 Aligned_cols=59 Identities=14% Similarity=0.079 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHhC-CCEEEEEEEEEEEEEccCCcEE-EEEEEEcCCCeEEEEEcCeEEEccCCcCC
Q 046556 184 HALLHTLYGQAMKH-NTQFFVEYFALDLIMNSDGTCQ-GVIALNMEDGTLHRFRAASTILATGGYGR 248 (633)
Q Consensus 184 ~~l~~~l~~~a~~~-gv~i~~~~~v~~L~~d~~g~v~-Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 248 (633)
..+...|.+.+++. |++++++++|+++.. +++.++ .+.+ .+|+ .+.||.||.|+|.++.
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~-~~~~v~g~v~~---~~g~--~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQR-DERHAIDQVRL---NDGR--VLRPRVVVGADGIASY 167 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEE-CTTSCEEEEEE---TTSC--EEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEE-cCCceEEEEEE---CCCC--EEECCEEEECCCCChH
Confidence 57888899988887 999999999999988 455554 3333 5676 4899999999998773
No 109
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.98 E-value=8e-10 Score=121.81 Aligned_cols=52 Identities=15% Similarity=0.238 Sum_probs=42.2
Q ss_pred HhCCCEEEEEEEEEEEEEc---cC-CcEEEEEEEEcCCC-eEEEEEc-CeEEEccCCcC
Q 046556 195 MKHNTQFFVEYFALDLIMN---SD-GTCQGVIALNMEDG-TLHRFRA-ASTILATGGYG 247 (633)
Q Consensus 195 ~~~gv~i~~~~~v~~L~~d---~~-g~v~Gv~~~~~~~G-~~~~i~A-~~VVlAtGg~~ 247 (633)
.+.|++|++++.|++|+.| ++ ++++||.+.+ .+| +.+.++| |.||||+|+++
T Consensus 219 ~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~-~~g~~~~~v~A~kEVILsAGai~ 276 (566)
T 3fim_B 219 SRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAE-QEGAPTTTVCAKKEVVLSAGSVG 276 (566)
T ss_dssp TCTTEEEESSCEEEEEECCEEETTEEECCEEEEES-STTSCCEEEEEEEEEEECCHHHH
T ss_pred cCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEE-CCCceEEEEEeeeEEEEecCCcC
Confidence 4679999999999999994 13 6899999875 345 6677899 67999999875
No 110
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.98 E-value=3.4e-10 Score=118.68 Aligned_cols=33 Identities=30% Similarity=0.326 Sum_probs=30.3
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
-.||+|||||+||++||..|++.| +|+|+|+..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~ 40 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEP 40 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCC
Confidence 469999999999999999999999 999999964
No 111
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.98 E-value=1.4e-09 Score=115.10 Aligned_cols=63 Identities=13% Similarity=-0.035 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRA 249 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 249 (633)
..+...|.+.+.+.|++++.+++|+++..++++.+ .|.+. .+|+...++||.||.|+|..+..
T Consensus 103 ~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~--~~g~~~~~~a~~vV~AdG~~S~v 165 (394)
T 1k0i_A 103 TEVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFE--RDGERLRLDCDYIAGCDGFHGIS 165 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEE--ETTEEEEEECSEEEECCCTTCST
T ss_pred HHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEe--cCCcEEEEEeCEEEECCCCCcHH
Confidence 46777888888888999999999999987323333 34442 36765579999999999988753
No 112
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.97 E-value=2.6e-10 Score=122.95 Aligned_cols=32 Identities=19% Similarity=0.142 Sum_probs=30.3
Q ss_pred cEEEECCchHHHHHHHHHHhC--CCcEEEEeecC
Q 046556 49 DAVVVGAGGAGLRAAIGLSEH--GFNTACITKLF 80 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~--G~~V~vlEk~~ 80 (633)
||+|||||+||++||..|++. |.+|+|+|+..
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCC
Confidence 899999999999999999997 89999999964
No 113
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.96 E-value=2.7e-09 Score=112.63 Aligned_cols=33 Identities=24% Similarity=0.165 Sum_probs=30.3
Q ss_pred cccEEEECCchHHHHHHHHHHhCC--CcEEEEeec
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHG--FNTACITKL 79 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G--~~V~vlEk~ 79 (633)
.+||+|||||+||++||..|++.| .+|+|+|+.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECC
Confidence 589999999999999999999998 468999985
No 114
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.96 E-value=1.8e-09 Score=112.96 Aligned_cols=40 Identities=25% Similarity=0.468 Sum_probs=35.7
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCC
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRS 84 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g 84 (633)
..++||+|||||++|+++|+.|+++|.+|+||||..+..|
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 4568999999999999999999999999999999765543
No 115
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.95 E-value=8e-09 Score=114.20 Aligned_cols=59 Identities=12% Similarity=0.067 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..+...|.+.+.+. ++++++|+++.. +++.|+ +.+.+..+|+...++||.||.|+|+.+
T Consensus 138 ~~l~~~L~~~a~~~---v~~~~~v~~~~~-~~~~v~-v~~~~~~~G~~~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 138 HWLAPLLAEAVGER---LRTRSRLDSFEQ-RDDHVR-ATITDLRTGATRAVHARYLVACDGASS 196 (549)
T ss_dssp HHHHHHHHHHHGGG---EECSEEEEEEEE-CSSCEE-EEEEETTTCCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHHh---cccCcEEEEEEE-eCCEEE-EEEEECCCCCEEEEEeCEEEECCCCCc
Confidence 45667777877766 889999999998 455554 455443457666799999999999887
No 116
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.95 E-value=2.7e-10 Score=123.15 Aligned_cols=35 Identities=34% Similarity=0.529 Sum_probs=32.4
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeecCC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFP 81 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~ 81 (633)
+|||+|||||+||++||..|++.|++|+|+|+...
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 35 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKA 35 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 37999999999999999999999999999999743
No 117
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.93 E-value=1.5e-08 Score=108.23 Aligned_cols=57 Identities=16% Similarity=0.224 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..+.+.|.+.+++.|++|+++++|++|.. ++++++||.+ +|+ .+.||.||+|+|.+.
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~-~~~~~~gv~~----~g~--~~~ad~VV~a~~~~~ 252 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILI-ENGKAAGIIA----DDR--IHDADLVISNLGHAA 252 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEE----TTE--EEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEE-ECCEEEEEEE----CCE--EEECCEEEECCCHHH
Confidence 56888999999999999999999999998 6788888865 354 489999999999764
No 118
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.91 E-value=3.4e-09 Score=112.82 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=30.5
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCc--EEEEeecC
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFN--TACITKLF 80 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~--V~vlEk~~ 80 (633)
.||+|||||+||++||..|++.|.+ |+|+|+..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~ 37 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEP 37 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCC
Confidence 3899999999999999999999987 99999864
No 119
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.91 E-value=2.3e-09 Score=118.07 Aligned_cols=55 Identities=24% Similarity=0.309 Sum_probs=43.4
Q ss_pred HHHHhCCCEEEEEEEEEEEEEccC--CcEEEEEEEEcCCCeEEEE---EcCeEEEccCCcC
Q 046556 192 GQAMKHNTQFFVEYFALDLIMNSD--GTCQGVIALNMEDGTLHRF---RAASTILATGGYG 247 (633)
Q Consensus 192 ~~a~~~gv~i~~~~~v~~L~~d~~--g~v~Gv~~~~~~~G~~~~i---~A~~VVlAtGg~~ 247 (633)
..+++.|++|++++.|++|+.+++ ++++||.+.+ .+|+.+.+ .++.||||+|+++
T Consensus 202 ~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~-~~g~~~~~~v~a~k~VILaaGa~~ 261 (536)
T 1ju2_A 202 NKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRD-SNGTPHQAFVRSKGEVIVSAGTIG 261 (536)
T ss_dssp GGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEEC-TTSCEEEEEEEEEEEEEECCHHHH
T ss_pred hhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEe-CCCceEEEEeccCCEEEEcCcccC
Confidence 344567999999999999999432 4899999875 46766555 5689999999985
No 120
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.90 E-value=5.5e-09 Score=115.03 Aligned_cols=49 Identities=10% Similarity=0.120 Sum_probs=42.5
Q ss_pred hCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 196 KHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 196 ~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
+.+++++.++.|++++. ++++++||.+.+ .+....+.|+.||||+|+++
T Consensus 223 r~nl~v~~~~~v~~i~~-~~~~a~gv~~~~--~~~~~~~~a~~VILsAGai~ 271 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKL-EGNQVRSLEVVG--RQGSAEVFADQIVLCAGALE 271 (526)
T ss_dssp CTTEEEECSCEEEEEEE-ETTEEEEEEEEE--TTEEEEEEEEEEEECSHHHH
T ss_pred CCCeEEEeCCEEEEEEe-cCCeEEEEEEEe--cCceEEEeecceEEcccccC
Confidence 56899999999999999 689999999875 45566789999999999876
No 121
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.90 E-value=6.9e-09 Score=110.29 Aligned_cols=56 Identities=13% Similarity=-0.009 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGR 248 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 248 (633)
..+...|.+.+.+ ++|+++++|+++.. +++.++ +.+ .+|+ .+.||.||.|+|..+.
T Consensus 127 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~-~~~~v~-v~~---~~g~--~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 127 AELQREMLDYWGR--DSVQFGKRVTRCEE-DADGVT-VWF---TDGS--SASGDLLIAADGSHSA 182 (407)
T ss_dssp HHHHHHHHHHHCG--GGEEESCCEEEEEE-ETTEEE-EEE---TTSC--EEEESEEEECCCTTCS
T ss_pred HHHHHHHHHhCCc--CEEEECCEEEEEEe-cCCcEE-EEE---cCCC--EEeeCEEEECCCcChH
Confidence 5677788887766 89999999999988 455432 222 5676 4899999999998874
No 122
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.90 E-value=9.9e-09 Score=112.55 Aligned_cols=60 Identities=15% Similarity=0.099 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRA 249 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 249 (633)
..+...|.+.+++.|++++.+ +|+++..++++.+++|.+ .+|+ .+.||.||.|+|.++..
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~---~~g~--~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHT---KQHG--EISGDLFVDCTGFRGLL 232 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEE---SSSC--EEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEE---CCCC--EEEcCEEEECCCcchHH
Confidence 578888999999999999999 999998855677777766 4665 48999999999988754
No 123
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.89 E-value=1.5e-08 Score=107.82 Aligned_cols=62 Identities=15% Similarity=0.020 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHh-CC-CEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCC
Q 046556 184 HALLHTLYGQAMK-HN-TQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGR 248 (633)
Q Consensus 184 ~~l~~~l~~~a~~-~g-v~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 248 (633)
..+...|.+.+.+ .| ++++++++|+++.. +++ ++ +.+.+..+|+...+.||.||.|+|..+.
T Consensus 107 ~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 107 GELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG-RV-LIGARDGHGKPQALGADVLVGADGIHSA 170 (410)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT-EE-EEEEEETTSCEEEEEESEEEECCCTTCH
T ss_pred HHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc-cE-EEEecCCCCCceEEecCEEEECCCccch
Confidence 4677788888876 36 58999999999987 444 33 4443323475556999999999998773
No 124
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.89 E-value=1.6e-08 Score=110.61 Aligned_cols=58 Identities=12% Similarity=0.070 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..+.+.|.+.+++.|++|+++++|++|.. ++++++||.+ .+|+. +.||.||.+++...
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~---~~g~~--~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMET-TGNKIEAVHL---EDGRR--FLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEE---TTSCE--EECSCEEECCC---
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEe-eCCeEEEEEe---cCCcE--EEcCEEEECCCHHH
Confidence 57889999999999999999999999999 7899999987 67875 89999999988553
No 125
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.88 E-value=4e-08 Score=109.16 Aligned_cols=54 Identities=13% Similarity=0.092 Sum_probs=45.1
Q ss_pred HHhCCCEEEEEEEEEEEEEccC---CcEEEEEEEEcCCCeEEEEEc-CeEEEccCCcCC
Q 046556 194 AMKHNTQFFVEYFALDLIMNSD---GTCQGVIALNMEDGTLHRFRA-ASTILATGGYGR 248 (633)
Q Consensus 194 a~~~gv~i~~~~~v~~L~~d~~---g~v~Gv~~~~~~~G~~~~i~A-~~VVlAtGg~~~ 248 (633)
+.+.|++|++++.|++|+.+++ ++++||.+.+ .+|+.+.++| +.||||+|+++.
T Consensus 241 ~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~-~~g~~~~v~A~k~VILaaG~~~s 298 (587)
T 1gpe_A 241 YQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGT-NKAVNFDVFAKHEVLLAAGSAIS 298 (587)
T ss_dssp TTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEE-ETTEEEEEEEEEEEEECSCTTTH
T ss_pred hcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEe-CCCcEEEEEecccEEEccCCCCC
Confidence 3457999999999999998432 5899999976 5788888999 889999999863
No 126
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.88 E-value=1.3e-08 Score=112.23 Aligned_cols=60 Identities=20% Similarity=0.264 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRA 249 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 249 (633)
..+...|.+.+++.|++++.+ +|+++..++++.+++|.+ .+|+ .+.||.||.|+|..+..
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~---~~g~--~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLT---KEGR--TLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEE---TTSC--EECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEE---CCCc--EEEeCEEEECCCCchhh
Confidence 577888999998899999999 899998855666777765 5665 48999999999988754
No 127
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.87 E-value=1.1e-08 Score=108.74 Aligned_cols=33 Identities=27% Similarity=0.437 Sum_probs=30.7
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC--cEEEEeecC
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF--NTACITKLF 80 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~--~V~vlEk~~ 80 (633)
.||+|||||+||++||..|++.|. +|+|+|+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCC
Confidence 479999999999999999999998 899999964
No 128
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.86 E-value=2.5e-08 Score=110.24 Aligned_cols=60 Identities=17% Similarity=0.164 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHhC-CCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCC
Q 046556 184 HALLHTLYGQAMKH-NTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRA 249 (633)
Q Consensus 184 ~~l~~~l~~~a~~~-gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 249 (633)
..+...|.+.+++. |++++.+ +|+++..++++.+++|.+ .+|+ .+.||.||+|+|..+..
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~---~~G~--~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRT---ATGR--VFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEE---TTSC--EEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEE---CCCC--EEECCEEEECCCCchhh
Confidence 56888899999888 9999999 999998755677777765 5665 48999999999988754
No 129
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.84 E-value=1.2e-08 Score=114.88 Aligned_cols=65 Identities=9% Similarity=0.049 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHhCCC--EEEEEEEEEEEEEccC--CcEEEEEEEEc---CCCeEEEEEcCeEEEccCCcCC
Q 046556 184 HALLHTLYGQAMKHNT--QFFVEYFALDLIMNSD--GTCQGVIALNM---EDGTLHRFRAASTILATGGYGR 248 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv--~i~~~~~v~~L~~d~~--g~v~Gv~~~~~---~~G~~~~i~A~~VVlAtGg~~~ 248 (633)
..+...|.+.+++.|+ +|+.+++|+++..+++ +..+.|.+.+. .+|+...++||.||.|+|+.+.
T Consensus 141 ~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 141 ARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp HHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchH
Confidence 5677888899988876 9999999999998542 22344555431 2566667999999999998873
No 130
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.83 E-value=7.5e-10 Score=115.29 Aligned_cols=46 Identities=28% Similarity=0.355 Sum_probs=38.6
Q ss_pred cEEEECCchHHHHHHHHHHhCC------CcEEEEeecCCCCCccccccccee
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHG------FNTACITKLFPTRSHTVAAQGGIN 94 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G------~~V~vlEk~~~~~g~t~~~~Gg~~ 94 (633)
||+|||||++|+++|+.|+++| .+|+||||.....+.|..+.|.++
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~aS~~~~g~~~ 53 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQ 53 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGSGGGTCCCBCC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCCccccCcceee
Confidence 8999999999999999999998 899999998765565555555444
No 131
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.81 E-value=3.3e-08 Score=105.10 Aligned_cols=35 Identities=23% Similarity=0.255 Sum_probs=31.6
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCC--cEEEEeecC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGF--NTACITKLF 80 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~--~V~vlEk~~ 80 (633)
..+||+|||||+||++||..|++.|. +|+|+|+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 42 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEA 42 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCC
Confidence 45899999999999999999999987 599999864
No 132
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.81 E-value=4.4e-08 Score=108.01 Aligned_cols=51 Identities=25% Similarity=0.419 Sum_probs=43.2
Q ss_pred hCCCEEEEEEEEEEEEEccC-CcEEEEEEEEcCCCeEEEEEcC-eEEEccCCcC
Q 046556 196 KHNTQFFVEYFALDLIMNSD-GTCQGVIALNMEDGTLHRFRAA-STILATGGYG 247 (633)
Q Consensus 196 ~~gv~i~~~~~v~~L~~d~~-g~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~~ 247 (633)
+.|++|++++.|++|+. ++ ++++||.+.+..+|+...++|+ .||||+|++.
T Consensus 221 ~~~~~i~~~~~V~~i~~-~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~ 273 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVF-DADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAID 273 (546)
T ss_dssp CTTEEEECSCEEEEEEE-CTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHH
T ss_pred CCCcEEEeCCEEEEEEE-CCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccC
Confidence 57999999999999999 45 8999999875323777789998 8999999974
No 133
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.81 E-value=1.8e-08 Score=108.09 Aligned_cols=58 Identities=12% Similarity=0.213 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCc
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGY 246 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 246 (633)
..+.+.|.+.+++.|++|++++.|++|..|++++++||.+ .+|+. +.|+.||+|+|-+
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~---~~G~~--i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKS---SDGEI--AYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEE---TTSCE--EEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEE---CCCcE--EECCEEEECCCcc
Confidence 4788999999999999999999999999856789999987 56764 8999999999855
No 134
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.80 E-value=6.3e-08 Score=106.48 Aligned_cols=60 Identities=13% Similarity=0.132 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHh-CCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCCC
Q 046556 184 HALLHTLYGQAMK-HNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRA 249 (633)
Q Consensus 184 ~~l~~~l~~~a~~-~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 249 (633)
..+...|.+.+++ .|++++.+ +|+++..++++.++++.+ .+|+. +.||.||.|+|..+..
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~---~~g~~--i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLIT---KQNGE--ISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEE---SSSCE--EECSEEEECSGGGCCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEE---CCCCE--EEcCEEEECCCcchHH
Confidence 5677888899988 89999999 699998854566667665 45554 8999999999988754
No 135
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.80 E-value=3.5e-08 Score=104.51 Aligned_cols=36 Identities=28% Similarity=0.315 Sum_probs=33.1
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFP 81 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~ 81 (633)
..+||+|||||++||++|+.|+++|.+|+|+||...
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 358999999999999999999999999999999743
No 136
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.80 E-value=2.1e-08 Score=105.49 Aligned_cols=54 Identities=19% Similarity=0.072 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..+...|.+.+.+.|++++++++|+++.. ++ .|.+ .+|+ .+.||.||.|+|..+
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~---~~g~--~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTL---QTGE--VLEADLIVGADGVGS 160 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEE---TTSC--EEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEE---CCCC--EEEcCEEEECCCccH
Confidence 57788888888889999999999999965 33 2333 4665 489999999999876
No 137
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.78 E-value=4.3e-08 Score=105.53 Aligned_cols=63 Identities=16% Similarity=0.085 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCe-EEEEEcCeEEEccCCcCC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGT-LHRFRAASTILATGGYGR 248 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~-~~~i~A~~VVlAtGg~~~ 248 (633)
..+.+.|.+.+++.+..++++++|+++.. +++.+ .|.+.+..+|+ ...+.+|.||+|||.++.
T Consensus 115 ~~l~~~l~~~~~~~~~~i~~~t~V~~v~~-~~~~~-~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 115 HTIQEYQRIYAQPLLPFIKLATDVLDIEK-KDGSW-VVTYKGTKAGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp HHHHHHHHHHHGGGGGGEECSEEEEEEEE-ETTEE-EEEEEESSTTCCEEEEEESEEEECCCSSSS
T ss_pred HHHHHHHHHHHHHhhCeEEeCCEEEEEEe-CCCeE-EEEEeecCCCCeeEEEEeCEEEECCCCCCC
Confidence 46677777777777888889999999977 44432 34444323465 456899999999998764
No 138
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.77 E-value=2e-08 Score=112.30 Aligned_cols=51 Identities=12% Similarity=0.172 Sum_probs=43.9
Q ss_pred CCCEEEEEEEEEEEEEccC-CcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 197 HNTQFFVEYFALDLIMNSD-GTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 197 ~gv~i~~~~~v~~L~~d~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
.|++|++++.|++|+.+++ ++++||.+.+..+|+...+.|+.||+|+|.+.
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~ 324 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVH 324 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTH
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcC
Confidence 4899999999999998432 48999999876678888899999999999875
No 139
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.76 E-value=3.8e-08 Score=106.41 Aligned_cols=63 Identities=17% Similarity=0.077 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEcc-CCcEEEE--EEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNS-DGTCQGV--IALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~-~g~v~Gv--~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..+...+...+.+.+++++++++|+++..++ +++..++ .+.+ .+|+...+.+|.||+|||+..
T Consensus 127 ~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~-g~g~~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 127 MEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRN-ADGEELVRTTRALVVSPGGTP 192 (463)
T ss_dssp HHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEE-TTSCEEEEEESEEEECCCCEE
T ss_pred HHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEec-CCCceEEEEeCEEEECCCCCC
Confidence 4566667777777899999999999997732 2444333 3333 235566799999999999844
No 140
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.76 E-value=6.5e-08 Score=105.68 Aligned_cols=56 Identities=16% Similarity=0.182 Sum_probs=44.3
Q ss_pred HHHHHhC-CCEEEEEEEEEEEEEccCC-cEEEEEEEEcCCC---eEEEEEcCeEEEccCCcC
Q 046556 191 YGQAMKH-NTQFFVEYFALDLIMNSDG-TCQGVIALNMEDG---TLHRFRAASTILATGGYG 247 (633)
Q Consensus 191 ~~~a~~~-gv~i~~~~~v~~L~~d~~g-~v~Gv~~~~~~~G---~~~~i~A~~VVlAtGg~~ 247 (633)
+..+++. +++|++++.|++|+.++++ +++||.+.+ .+| +...++|+.||||+|+++
T Consensus 228 l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~-~~g~~~~~~~v~A~~VIlaaG~~~ 288 (504)
T 1n4w_A 228 LAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKD-TDGKLLATKEISCRYLFLGAGSLG 288 (504)
T ss_dssp HHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEEC-TTCCEEEEEEEEEEEEEECSHHHH
T ss_pred HHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC-CCCccceeEEEeeCEEEEccCCCC
Confidence 3445555 5999999999999995434 899999864 356 566799999999999985
No 141
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.74 E-value=3.6e-08 Score=108.68 Aligned_cols=138 Identities=18% Similarity=0.180 Sum_probs=83.2
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccc-cceeeecCCCCcCCHHHHHHHHHhcCCCCCCHH
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQ-GGINAALGNMTEDDWRWHMYDTVKGSDWLGDQD 123 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~-Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~ 123 (633)
..++||+|||||++|+++|+.|++.|.+|+|+||....+|...... -|....... .. ..+...++
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s---~~-----------y~~~f~~~ 84 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVES---ID-----------YSYSFSPE 84 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCT---TT-----------SSCCSCHH
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCc---hh-----------cccccccc
Confidence 3468999999999999999999999999999999754433221110 011000000 00 00000000
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCC--EE
Q 046556 124 AIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNT--QF 201 (633)
Q Consensus 124 ~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv--~i 201 (633)
. +..++.. . .-..+..+...+.+.+++.++ .+
T Consensus 85 ~--------------~~~~~~~------------------~--------------~~~~~~ei~~yl~~~~~~~g~~~~i 118 (549)
T 4ap3_A 85 L--------------EQEWNWS------------------E--------------KYATQPEILAYLEHVADRFDLRRDI 118 (549)
T ss_dssp H--------------HHHCCCS------------------S--------------SSCBHHHHHHHHHHHHHHTTCGGGE
T ss_pred c--------------ccCCCCc------------------c--------------CCCCHHHHHHHHHHHHHHcCCCccE
Confidence 0 0000000 0 001345777778888888887 88
Q ss_pred EEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 202 FVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 202 ~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
+++++|+++..++++....|.+ .+|+. +.||.||+|||.++
T Consensus 119 ~~~~~V~~i~~~~~~~~w~V~~---~~G~~--i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 119 RFDTRVTSAVLDEEGLRWTVRT---DRGDE--VSARFLVVAAGPLS 159 (549)
T ss_dssp ECSCCEEEEEEETTTTEEEEEE---TTCCE--EEEEEEEECCCSEE
T ss_pred EECCEEEEEEEcCCCCEEEEEE---CCCCE--EEeCEEEECcCCCC
Confidence 9999999998754443433443 56764 89999999999654
No 142
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.74 E-value=1.6e-08 Score=111.82 Aligned_cols=57 Identities=18% Similarity=0.229 Sum_probs=43.6
Q ss_pred HHHHHHh-CCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeE---EEEEcCeEEEccCCcC
Q 046556 190 LYGQAMK-HNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTL---HRFRAASTILATGGYG 247 (633)
Q Consensus 190 l~~~a~~-~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~---~~i~A~~VVlAtGg~~ 247 (633)
+++.+++ .|++|++++.|++|+. ++++++||.+.+..+|+. ....+|.||||+|+++
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~-~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~ 261 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVR-NGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFG 261 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEE-ETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHH
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEE-eCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhc
Confidence 4455554 5999999999999999 578999999865324642 2337899999999976
No 143
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.72 E-value=3.6e-07 Score=97.40 Aligned_cols=55 Identities=11% Similarity=0.180 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..+.+.|.+.+++.|++|+++++|++|.. +++++ | . .+|+ .+.||.||+|+|.+.
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~-~~~~v--V-~---~~g~--~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINI-EEKKV--Y-T---RDNE--EYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEET-TTTEE--E-E---TTCC--EEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEE-ECCEE--E-E---eCCc--EEEeCEEEECCCHHH
Confidence 57888999999999999999999999988 56665 3 2 3555 389999999999654
No 144
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.72 E-value=7e-08 Score=99.02 Aligned_cols=34 Identities=41% Similarity=0.591 Sum_probs=32.4
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
..+||+|||||+||++||+.|++.|++|+|+||.
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 40 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG 40 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC
Confidence 4689999999999999999999999999999997
No 145
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.71 E-value=1.4e-07 Score=101.89 Aligned_cols=66 Identities=14% Similarity=0.119 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHHHhCCCE--EEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCC
Q 046556 183 GHALLHTLYGQAMKHNTQ--FFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGR 248 (633)
Q Consensus 183 g~~l~~~l~~~a~~~gv~--i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 248 (633)
...+...+.+.+++.|++ +++++.|+.+..++++....|.+.+..+|+...+.+|.||+|||.++.
T Consensus 100 ~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~ 167 (464)
T 2xve_A 100 REVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFST 167 (464)
T ss_dssp HHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCSSSS
T ss_pred HHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCCC
Confidence 457777888888888988 889999999987333223344554434566567899999999997654
No 146
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.71 E-value=6e-08 Score=100.41 Aligned_cols=37 Identities=24% Similarity=0.170 Sum_probs=33.2
Q ss_pred ccEEEECCchHHHHHHHHHHh---CCCcEEEEeecCCCCC
Q 046556 48 YDAVVVGAGGAGLRAAIGLSE---HGFNTACITKLFPTRS 84 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~---~G~~V~vlEk~~~~~g 84 (633)
+||+|||||++|+++|+.|++ .|++|+|+||....+|
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg 41 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGG 41 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCG
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCcc
Confidence 589999999999999999999 9999999999765443
No 147
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.71 E-value=1e-07 Score=100.98 Aligned_cols=36 Identities=19% Similarity=0.337 Sum_probs=33.3
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFP 81 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~ 81 (633)
.++||+|||||++|+++|+.|++.|.+|+|+||...
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 458999999999999999999999999999999753
No 148
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.71 E-value=5e-08 Score=100.51 Aligned_cols=38 Identities=29% Similarity=0.348 Sum_probs=34.2
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRS 84 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g 84 (633)
.+||+|||||++|+++|+.|+++|.+|+|+||....+|
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg 39 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGG 39 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcc
Confidence 37999999999999999999999999999999865444
No 149
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.71 E-value=6.9e-08 Score=106.54 Aligned_cols=40 Identities=33% Similarity=0.310 Sum_probs=35.2
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCC
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRS 84 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g 84 (633)
..++||+|||||++|+++|+.|++.|.+|+|+||....+|
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG 53 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGG 53 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 3468999999999999999999999999999999755433
No 150
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.69 E-value=5.7e-08 Score=106.85 Aligned_cols=137 Identities=23% Similarity=0.208 Sum_probs=83.9
Q ss_pred ccccEEEECCchHHHHHHHHHH-hCCCcEEEEeecCCCCCccccc--ccceeeecCCCCcCCHHHHHHHHHhcCCCCCCH
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLS-EHGFNTACITKLFPTRSHTVAA--QGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQ 122 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa-~~G~~V~vlEk~~~~~g~t~~~--~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~ 122 (633)
.++||+|||||++|++||+.|+ +.|.+|+|+||....+|..... .|..+...... ..+...+
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~---------------~~~~~~~ 71 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHL---------------YRFSFDR 71 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGG---------------SSCCSCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcce---------------eeecccc
Confidence 4589999999999999999999 8999999999975443322111 11111000000 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCC--E
Q 046556 123 DAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNT--Q 200 (633)
Q Consensus 123 ~~v~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv--~ 200 (633)
.. ...++.. .. -..+..+...+.+.+++.|+ .
T Consensus 72 ~~--------------~~~~~~~------------------~~--------------~~~~~ei~~~l~~~~~~~g~~~~ 105 (540)
T 3gwf_A 72 DL--------------LQESTWK------------------TT--------------YITQPEILEYLEDVVDRFDLRRH 105 (540)
T ss_dssp HH--------------HHHCCCS------------------BS--------------EEEHHHHHHHHHHHHHHTTCGGG
T ss_pred cc--------------ccCCCCc------------------cc--------------CCCHHHHHHHHHHHHHHcCCcce
Confidence 00 0011000 00 00235677778888888888 8
Q ss_pred EEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCC
Q 046556 201 FFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGR 248 (633)
Q Consensus 201 i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 248 (633)
++++++|+++..++++....|.+ .+|+ .+.|+.||+|||.++.
T Consensus 106 i~~~~~V~~i~~~~~~~~~~V~~---~~G~--~i~ad~lV~AtG~~s~ 148 (540)
T 3gwf_A 106 FKFGTEVTSALYLDDENLWEVTT---DHGE--VYRAKYVVNAVGLLSA 148 (540)
T ss_dssp EEESCCEEEEEEETTTTEEEEEE---TTSC--EEEEEEEEECCCSCCS
T ss_pred eEeccEEEEEEEeCCCCEEEEEE---cCCC--EEEeCEEEECCccccc
Confidence 99999999998854444433443 5676 4899999999998654
No 151
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.68 E-value=6.7e-07 Score=90.86 Aligned_cols=47 Identities=13% Similarity=0.215 Sum_probs=39.7
Q ss_pred CCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccC
Q 046556 197 HNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATG 244 (633)
Q Consensus 197 ~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 244 (633)
.|++++.++.++++.. +++++.++.+.+..+|+...+.+|.||+|+|
T Consensus 193 ~gv~v~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 239 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKG-DGSKVVGLEYRDRVSGDIHNIELAGIFVQIG 239 (310)
T ss_dssp TTEEEESSEEEEEEEE-SSSSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred CCeEEecCCceEEEEc-CCCcEEEEEEEECCCCcEEEEEcCEEEEeeC
Confidence 5899999999999987 5678888888765567767799999999998
No 152
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.66 E-value=1.4e-07 Score=96.06 Aligned_cols=32 Identities=31% Similarity=0.481 Sum_probs=30.9
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
+||+|||||++|++||+.|++.|. +|+|+|+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC
Confidence 699999999999999999999999 99999995
No 153
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.64 E-value=1.9e-07 Score=105.37 Aligned_cols=35 Identities=43% Similarity=0.449 Sum_probs=32.7
Q ss_pred ccccEEEECCchHHHHHHHHHHh-----CCCcEEEEeecC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSE-----HGFNTACITKLF 80 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~-----~G~~V~vlEk~~ 80 (633)
.++||||||||++||++|+.|++ .|.+|+||||..
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~ 46 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 46 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCC
Confidence 46899999999999999999999 999999999964
No 154
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.63 E-value=2.5e-07 Score=101.01 Aligned_cols=56 Identities=14% Similarity=0.136 Sum_probs=43.7
Q ss_pred HHHHHhC-CCEEEEEEEEEEEEEccCC-cEEEEEEEEcCCC---eEEEEEcCeEEEccCCcC
Q 046556 191 YGQAMKH-NTQFFVEYFALDLIMNSDG-TCQGVIALNMEDG---TLHRFRAASTILATGGYG 247 (633)
Q Consensus 191 ~~~a~~~-gv~i~~~~~v~~L~~d~~g-~v~Gv~~~~~~~G---~~~~i~A~~VVlAtGg~~ 247 (633)
+..+++. +++|++++.|++|+.++++ +++||.+.+ .+| +...++|+.||||+|+++
T Consensus 233 l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~-~~g~~~~~~~~~A~~VIlaaGa~~ 293 (507)
T 1coy_A 233 LAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQID-EQGNVVATKVVTADRVFFAAGSVG 293 (507)
T ss_dssp HHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEEC-TTSCEEEEEEEEEEEEEECSHHHH
T ss_pred HHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC-CCCcccccEEEEeCEEEEccCccC
Confidence 3344444 6999999999999995435 799999864 355 466799999999999985
No 155
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.63 E-value=1.6e-07 Score=98.05 Aligned_cols=58 Identities=17% Similarity=0.218 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCC
Q 046556 183 GHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGR 248 (633)
Q Consensus 183 g~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 248 (633)
+..+...+...+++.|++++.++.|+++.. +++.+. +.+ .++ .+.+|.||+|||.++.
T Consensus 87 ~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~-~~~~~~-v~~---~~g---~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 87 GETYAEYLQVVANHYELNIFENTVVTNISA-DDAYYT-IAT---TTE---TYHADYIFVATGDYNF 144 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-CSSSEE-EEE---SSC---CEEEEEEEECCCSTTS
T ss_pred HHHHHHHHHHHHHHcCCeEEeCCEEEEEEE-CCCeEE-EEe---CCC---EEEeCEEEECCCCCCc
Confidence 356667777778889999999999999987 333321 222 344 3789999999998763
No 156
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.61 E-value=1.4e-07 Score=95.90 Aligned_cols=59 Identities=22% Similarity=0.175 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccC-CcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSD-GTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..+...+.+.+++.|++++.+++|+.+..+.+ +....+.+ .+|+ .+.++.||+|||...
T Consensus 56 ~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~---~~g~--~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 56 QKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIET---ASGA--VLKARSIIVATGAKW 115 (310)
T ss_dssp HHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEE---TTSC--EEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEE---CCCC--EEEeCEEEECcCCCc
Confidence 45666777777888999999999999865221 22222332 4664 388999999999865
No 157
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.61 E-value=1.2e-06 Score=88.94 Aligned_cols=48 Identities=8% Similarity=0.162 Sum_probs=38.6
Q ss_pred hCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccC
Q 046556 196 KHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATG 244 (633)
Q Consensus 196 ~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 244 (633)
+.||+++.++.++++.. +++++.++.+.+..+|+...+.+|.||+|+|
T Consensus 191 ~~gv~v~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 238 (311)
T 2q0l_A 191 NDKIEFLTPYVVEEIKG-DASGVSSLSIKNTATNEKRELVVPGFFIFVG 238 (311)
T ss_dssp CTTEEEETTEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred CCCeEEEeCCEEEEEEC-CCCcEeEEEEEecCCCceEEEecCEEEEEec
Confidence 36899999999999987 4567777777654467766789999999998
No 158
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.59 E-value=1.7e-07 Score=103.13 Aligned_cols=139 Identities=16% Similarity=0.001 Sum_probs=81.9
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHHHH
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI 125 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v 125 (633)
.++||||||||++|+++|+.|++.|.+|+|+||....+|.... +...+. ..+.. .+ .
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~-----~~yPg~-~~d~~-~~----------------~ 64 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYW-----NRYPGC-RLDTE-SY----------------A 64 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHH-----CCCTTC-BCSSC-HH----------------H
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccc-----CCCCce-eecCc-hh----------------h
Confidence 4589999999999999999999999999999997544332110 000100 00000 00 0
Q ss_pred HHHHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCC--EEEE
Q 046556 126 QYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNT--QFFV 203 (633)
Q Consensus 126 ~~~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv--~i~~ 203 (633)
.. ..|........ ..+. .-..+..+...+.+.+++.++ .+++
T Consensus 65 y~----------------~~f~~~~~~~~------~~~~--------------~~~~~~ei~~yl~~~~~~~~l~~~i~~ 108 (545)
T 3uox_A 65 YG----------------YFALKGIIPEW------EWSE--------------NFASQPEMLRYVNRAADAMDVRKHYRF 108 (545)
T ss_dssp HC----------------HHHHTTSSTTC------CCSB--------------SSCBHHHHHHHHHHHHHHHTCGGGEEC
T ss_pred cc----------------cccCcccccCC------Cccc--------------cCCCHHHHHHHHHHHHHHcCCcCcEEE
Confidence 00 00100000000 0000 001345677777777777777 7888
Q ss_pred EEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcCC
Q 046556 204 EYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGR 248 (633)
Q Consensus 204 ~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 248 (633)
+++|+++..++++...-|.+ .+|+ .+.||.||+|||.++.
T Consensus 109 ~~~V~~~~~~~~~~~w~V~~---~~G~--~~~ad~lV~AtG~~s~ 148 (545)
T 3uox_A 109 NTRVTAARYVENDRLWEVTL---DNEE--VVTCRFLISATGPLSA 148 (545)
T ss_dssp SCCEEEEEEEGGGTEEEEEE---TTTE--EEEEEEEEECCCSCBC
T ss_pred CCEEEEEEEeCCCCEEEEEE---CCCC--EEEeCEEEECcCCCCC
Confidence 99999998744433333433 5776 4899999999997653
No 159
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.57 E-value=1.2e-06 Score=96.03 Aligned_cols=47 Identities=13% Similarity=0.198 Sum_probs=40.1
Q ss_pred CCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccC
Q 046556 197 HNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATG 244 (633)
Q Consensus 197 ~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 244 (633)
.||+++.++.++++.. +++++.++.+.+..+|+...+.+|.||+|+|
T Consensus 404 ~gV~v~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 450 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKG-DGSKVVGLEYRDRVSGDIHSVALAGIFVQIG 450 (521)
T ss_dssp TTEEEECSEEEEEEEE-CSSSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CCcEEEeCCEEEEEEc-CCCcEEEEEEEeCCCCceEEEEcCEEEECcC
Confidence 5899999999999987 5678889888765567777799999999998
No 160
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.55 E-value=2.7e-07 Score=101.13 Aligned_cols=59 Identities=20% Similarity=0.219 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccC-CcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSD-GTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..+...+.+.+++.|++++.+++|+.+..+.+ +....+.+ .+|+ .+.++.||+|||+..
T Consensus 267 ~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~---~~g~--~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 267 QKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIET---ASGA--VLKARSIIIATGAKW 326 (521)
T ss_dssp HHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEE---TTSC--EEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEE---CCCC--EEEcCEEEECCCCCc
Confidence 56667777888889999999999999965211 22222333 5665 388999999999865
No 161
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.54 E-value=6.1e-07 Score=100.22 Aligned_cols=35 Identities=31% Similarity=0.526 Sum_probs=32.5
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
...+||+|||||+||++||..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 34689999999999999999999999999999984
No 162
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.53 E-value=1.1e-07 Score=103.59 Aligned_cols=39 Identities=28% Similarity=0.326 Sum_probs=34.0
Q ss_pred cccccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCC
Q 046556 43 IVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPT 82 (633)
Q Consensus 43 ~~~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~ 82 (633)
++...+||+|||||++|++||+.|++. ++|+|+|+....
T Consensus 104 ~~~~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~ 142 (493)
T 1y56_A 104 IERVVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWL 142 (493)
T ss_dssp CEEEEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSS
T ss_pred cccccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCC
Confidence 334568999999999999999999999 999999997543
No 163
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.52 E-value=4.3e-07 Score=92.69 Aligned_cols=34 Identities=24% Similarity=0.386 Sum_probs=31.8
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
..+||+|||||+||++||+.|++.|++|+|+|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC
Confidence 3589999999999999999999999999999975
No 164
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.50 E-value=2.4e-07 Score=95.21 Aligned_cols=33 Identities=24% Similarity=0.270 Sum_probs=31.5
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEee
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITK 78 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk 78 (633)
..+||+|||||++|+++|+.|++.|++|+|+|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEec
Confidence 458999999999999999999999999999998
No 165
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.50 E-value=4.1e-07 Score=93.75 Aligned_cols=35 Identities=23% Similarity=0.331 Sum_probs=32.4
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
...+||+|||||++|++||+.|++.|++|+|+|+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 46 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT 46 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 34689999999999999999999999999999975
No 166
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.48 E-value=3.8e-07 Score=97.46 Aligned_cols=39 Identities=33% Similarity=0.419 Sum_probs=34.7
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcc
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHT 86 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t 86 (633)
+||+|||||++|++||+.|+++|.+|+|||+....+|.+
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~ 40 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRA 40 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCee
Confidence 799999999999999999999999999999965554443
No 167
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.47 E-value=4.4e-07 Score=98.85 Aligned_cols=33 Identities=12% Similarity=0.276 Sum_probs=30.7
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
+..|||||||.||+++|..|++.+++|+|||+.
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESS
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCC
Confidence 357999999999999999999999999999985
No 168
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.44 E-value=1.2e-07 Score=93.61 Aligned_cols=38 Identities=29% Similarity=0.348 Sum_probs=34.5
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRS 84 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g 84 (633)
++||+|||||||||+||+.|+++|++|+|+||....+|
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG 39 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGG 39 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC
Confidence 48999999999999999999999999999999765544
No 169
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.44 E-value=1.1e-06 Score=95.30 Aligned_cols=57 Identities=12% Similarity=-0.016 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..+.+.|.+.+.+.|++|+++++|++|.. +++.++.|.+ ++. .+.||.||+|++...
T Consensus 234 ~~l~~~l~~~l~~~g~~i~~~~~V~~i~~-~~~~~~~v~~----~~~--~~~ad~vv~a~p~~~ 290 (477)
T 3nks_A 234 EMLPQALETHLTSRGVSVLRGQPVCGLSL-QAEGRWKVSL----RDS--SLEADHVISAIPASV 290 (477)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEE-CGGGCEEEEC----SSC--EEEESEEEECSCHHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEE-cCCceEEEEE----CCe--EEEcCEEEECCCHHH
Confidence 36788888888889999999999999988 4444333422 343 389999999998654
No 170
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.43 E-value=4.7e-07 Score=99.38 Aligned_cols=41 Identities=32% Similarity=0.401 Sum_probs=36.0
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcc
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHT 86 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t 86 (633)
..+||+|||||+|||+||..|+++|.+|+|+|+....+|.+
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~ 43 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRT 43 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCce
Confidence 35799999999999999999999999999999976655543
No 171
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.40 E-value=7.6e-07 Score=96.01 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=32.0
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.++||+|||||+||++||.+|++.|++|+|+|+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 4589999999999999999999999999999994
No 172
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.40 E-value=6.2e-07 Score=97.22 Aligned_cols=40 Identities=23% Similarity=0.268 Sum_probs=34.7
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCc
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSH 85 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~ 85 (633)
..+||+|||||++||+||+.|+++|.+|+|+|+....+|.
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr 54 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGA 54 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCce
Confidence 4689999999999999999999999999999998665554
No 173
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.38 E-value=6.5e-05 Score=79.19 Aligned_cols=32 Identities=28% Similarity=0.258 Sum_probs=28.2
Q ss_pred cEEEECCchHHHHHHHHHHhCC--CcEEEEeecC
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHG--FNTACITKLF 80 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G--~~V~vlEk~~ 80 (633)
.|||||||+||++||.+|++.+ .+|+|||+..
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 3999999999999999998865 5899999863
No 174
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.37 E-value=3.7e-07 Score=98.57 Aligned_cols=39 Identities=18% Similarity=0.227 Sum_probs=34.7
Q ss_pred cccEEEECCchHHHHHHHHHHhCC------CcEEEEeecCCCCCc
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHG------FNTACITKLFPTRSH 85 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G------~~V~vlEk~~~~~g~ 85 (633)
.+||+|||||++||+||+.|+++| .+|+|+|+....+|.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~ 49 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGK 49 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCce
Confidence 479999999999999999999999 999999997655443
No 175
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.31 E-value=1.5e-06 Score=91.87 Aligned_cols=33 Identities=27% Similarity=0.395 Sum_probs=30.8
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeecCC
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKLFP 81 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~ 81 (633)
.|+|||||++||++|+.|+++|++|+|+||...
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 599999999999999999999999999999643
No 176
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.30 E-value=4.2e-05 Score=85.23 Aligned_cols=31 Identities=23% Similarity=0.256 Sum_probs=29.3
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|||||..|+-+|..+++.|.+|+|+++.
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 5999999999999999999999999999974
No 177
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.28 E-value=2.6e-06 Score=91.48 Aligned_cols=49 Identities=18% Similarity=0.306 Sum_probs=39.0
Q ss_pred cCcccCCC-CceeeecCCCCCCcccCeeeecccccccccCCCCCChhhHHHHHHHHHHHHHHHHHHhCC
Q 046556 399 GGIPTNHH-GEVVTIKGDDPDEVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQRP 466 (633)
Q Consensus 399 GGi~vd~~-~~vl~~d~~~~~T~ipGLyAaGe~a~~g~~Ga~rlgg~~l~~a~~~G~~Ag~~aa~~~~~ 466 (633)
|.|.+|+. .+ |++||+||+|||+ .+. .....|+..|+.||++|..++..
T Consensus 396 G~i~vd~~~~~----------Ts~~~VfA~GD~~-~g~--------~~v~~A~~~G~~aA~~i~~~L~~ 445 (456)
T 2vdc_G 396 GTLLVDHRTKM----------TNMDGVFAAGDIV-RGA--------SLVVWAIRDGRDAAEGIHAYAKA 445 (456)
T ss_dssp SSBCCCTTTCB----------CSSTTEEECGGGG-SSC--------CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEECCCCCc----------CCCCCEEEecccc-CCc--------hHHHHHHHHHHHHHHHHHHHhhc
Confidence 67888876 55 9999999999997 321 23567899999999999988754
No 178
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.27 E-value=8.6e-06 Score=96.30 Aligned_cols=31 Identities=19% Similarity=0.296 Sum_probs=29.1
Q ss_pred cEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
.|+|||||..|+-+|..+++.|. +|+|+++.
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~ 365 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRK 365 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEec
Confidence 79999999999999999999997 89999985
No 179
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.27 E-value=2.7e-06 Score=99.86 Aligned_cols=38 Identities=34% Similarity=0.359 Sum_probs=34.3
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCC
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPT 82 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~ 82 (633)
...+||||||+|+||++||+.|++.|++|+|+|+....
T Consensus 126 ~~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~ 163 (965)
T 2gag_A 126 HVHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEA 163 (965)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 35689999999999999999999999999999997543
No 180
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.26 E-value=1.9e-05 Score=85.98 Aligned_cols=65 Identities=15% Similarity=0.125 Sum_probs=49.8
Q ss_pred hHHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCC------cEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 183 GHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDG------TCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 183 g~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g------~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..++.+.|...+.+.+..+.++++|+++..++.+ ...-|.+.+..+|+..++.|+.||+|||...
T Consensus 144 r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P 214 (501)
T 4b63_A 144 RLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTA 214 (501)
T ss_dssp HHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCC
Confidence 3577778888888888889999999999863322 2344566666778888899999999999754
No 181
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.19 E-value=1.8e-05 Score=90.20 Aligned_cols=40 Identities=28% Similarity=0.389 Sum_probs=35.6
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCC
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRS 84 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g 84 (633)
...+||+|||+|++|++||+.|++.|++|+|+|+....+|
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 3468999999999999999999999999999999765554
No 182
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.18 E-value=2.2e-05 Score=84.38 Aligned_cols=50 Identities=20% Similarity=0.238 Sum_probs=37.7
Q ss_pred cCcccCCCCceeeecCCCCCCc-ccCeeeecccccccccCCCCCChhhHHHHHHHHHHHHHHHHHHhCC
Q 046556 399 GGIPTNHHGEVVTIKGDDPDEV-VPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQRP 466 (633)
Q Consensus 399 GGi~vd~~~~vl~~d~~~~~T~-ipGLyAaGe~a~~g~~Ga~rlgg~~l~~a~~~G~~Ag~~aa~~~~~ 466 (633)
|||.+|+.++ |+ +||+||+|||+ .+..| .+..++..|+.+|.+++..+..
T Consensus 346 g~i~vn~~~r----------t~~~p~vya~Gd~~-~g~~~-------~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 346 LGVVPNMEGR----------VVDVPGLYCSGWVK-RGPTG-------VITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp TTBCCEETTE----------ETTCTTEEECTHHH-HCTTC-------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeeECCCCc----------CcCCCCEEEEEeCC-cCCCc-------cHHHHHHHHHHHHHHHHHHHHh
Confidence 6788888877 66 89999999997 33322 1346788899999999887643
No 183
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.17 E-value=1.3e-05 Score=90.78 Aligned_cols=40 Identities=28% Similarity=0.350 Sum_probs=35.3
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCC
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRS 84 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g 84 (633)
...+||+|||||+||++||+.|+++|++|+|+||....+|
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG 428 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGG 428 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 4568999999999999999999999999999999754433
No 184
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.10 E-value=2.4e-06 Score=90.61 Aligned_cols=32 Identities=25% Similarity=0.225 Sum_probs=30.3
Q ss_pred cEEEECCchHHHHHHHHHHh---CCCcEEEEeecC
Q 046556 49 DAVVVGAGGAGLRAAIGLSE---HGFNTACITKLF 80 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~---~G~~V~vlEk~~ 80 (633)
||+|||||++|++||..|++ .|.+|+|+|+..
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~ 37 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR 37 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC
Confidence 79999999999999999999 899999999964
No 185
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.09 E-value=1.7e-06 Score=94.58 Aligned_cols=41 Identities=27% Similarity=0.304 Sum_probs=36.7
Q ss_pred ccccEEEECCchHHHHHHHHHHh-CCCcEEEEeecCCCCCcc
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSE-HGFNTACITKLFPTRSHT 86 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~-~G~~V~vlEk~~~~~g~t 86 (633)
.++||||||||++||+||+.|++ .|.+|+|+|+....+|.+
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLA 50 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCe
Confidence 46999999999999999999998 599999999988777754
No 186
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.08 E-value=3.6e-06 Score=89.96 Aligned_cols=34 Identities=32% Similarity=0.536 Sum_probs=31.4
Q ss_pred cccEEEECCchHHHHHHHHHHhCCC--cEEEEeecC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGF--NTACITKLF 80 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~--~V~vlEk~~ 80 (633)
.+||+|||||+||++||..|++.|. +|+|+|+..
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDAT 39 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCC
Confidence 5799999999999999999999998 799999863
No 187
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.05 E-value=3.1e-06 Score=91.10 Aligned_cols=57 Identities=12% Similarity=0.137 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEcc--CCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNS--DGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~--~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..+.+.|.+.+++.|++|++++.|++|.. + +++++||.+ +|+ .+.||.||+|+|.++
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~-~~~~~~~~~V~~----~g~--~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLY-KKDTGKFEGVKT----KLG--TFKAPLVIADPTYFP 300 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEE-ETTTTEEEEEEE----TTE--EEECSCEEECGGGCG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEE-ECCCCeEEEEEE----CCe--EEECCEEEECCCccc
Confidence 47888999999999999999999999998 5 788888765 354 389999999999774
No 188
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.93 E-value=5.8e-05 Score=76.69 Aligned_cols=55 Identities=13% Similarity=0.139 Sum_probs=42.5
Q ss_pred HHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCC-CeEEEEEcCeEEEccCC
Q 046556 190 LYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMED-GTLHRFRAASTILATGG 245 (633)
Q Consensus 190 l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~-G~~~~i~A~~VVlAtGg 245 (633)
+.+.+++.||+++.++.|+++.. +++++.++.+.+..+ |+...+.+|.||+|+|-
T Consensus 190 l~~~l~~~gv~i~~~~~v~~i~~-~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 190 LMDKVENGNIILHTNRTLEEVTG-DQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGH 245 (320)
T ss_dssp HHHHHHTSSEEEECSCEEEEEEE-CSSSEEEEEEECCTTCCCCEEEECSEEEECSCE
T ss_pred HHHhcccCCeEEEcCceeEEEEc-CCCceEEEEEEeccCCCceEEEEcCEEEEEeCC
Confidence 44556678999999999999987 556888888754223 55456899999999993
No 189
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.87 E-value=9.6e-05 Score=78.35 Aligned_cols=96 Identities=25% Similarity=0.283 Sum_probs=74.8
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcccccccceeeecCCCCcCCHHHHHHHHHhcCCCCCCHHHHHH
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQY 127 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~~~~Gg~~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v~~ 127 (633)
-.|+|||+|..|+-+|..+++.|.+|+++++.......
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~------------------------------------------ 190 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR------------------------------------------ 190 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh------------------------------------------
Confidence 46999999999999999999999999999985321000
Q ss_pred HHHHHHHHHHHHHHCCCcccccCCCcccccccCCcccccCCCCccceeEEccCCchHHHHHHHHHHHHhCCCEEEEEEEE
Q 046556 128 MCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFA 207 (633)
Q Consensus 128 ~~~~~~~~~~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~l~~~a~~~gv~i~~~~~v 207 (633)
..+..+...+.+.+++.|+++++++.|
T Consensus 191 -----------------------------------------------------~~~~~~~~~l~~~l~~~GV~i~~~~~v 217 (415)
T 3lxd_A 191 -----------------------------------------------------VAGEALSEFYQAEHRAHGVDLRTGAAM 217 (415)
T ss_dssp -----------------------------------------------------TSCHHHHHHHHHHHHHTTCEEEETCCE
T ss_pred -----------------------------------------------------hcCHHHHHHHHHHHHhCCCEEEECCEE
Confidence 000233444556677889999999999
Q ss_pred EEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccC
Q 046556 208 LDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATG 244 (633)
Q Consensus 208 ~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 244 (633)
+++.. +++++.++.+ .+|+. +.||.||+|+|
T Consensus 218 ~~i~~-~~~~v~~v~l---~dG~~--i~aD~Vv~a~G 248 (415)
T 3lxd_A 218 DCIEG-DGTKVTGVRM---QDGSV--IPADIVIVGIG 248 (415)
T ss_dssp EEEEE-SSSBEEEEEE---SSSCE--EECSEEEECSC
T ss_pred EEEEe-cCCcEEEEEe---CCCCE--EEcCEEEECCC
Confidence 99988 6788888876 56764 89999999999
No 190
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.87 E-value=0.00014 Score=78.54 Aligned_cols=59 Identities=12% Similarity=0.118 Sum_probs=41.2
Q ss_pred HHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCc
Q 046556 188 HTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGY 246 (633)
Q Consensus 188 ~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 246 (633)
..+.+.+++.|++++.++.|+++..++++..+.+.+.+..+|+...+.+|.||+|+|-.
T Consensus 228 ~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 286 (478)
T 1v59_A 228 KATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRR 286 (478)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCC
Confidence 34555667789999999999999762144555565543334554568999999999943
No 191
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.84 E-value=9.1e-05 Score=78.25 Aligned_cols=54 Identities=11% Similarity=0.177 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCC
Q 046556 186 LLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGG 245 (633)
Q Consensus 186 l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 245 (633)
+...+.+.+++.|++++.++.|+++.. +++++.++.+ .+|+. +.||.||+|+|-
T Consensus 186 ~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~V~~---~dG~~--i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 186 ISSYFHDRHSGAGIRMHYGVRATEIAA-EGDRVTGVVL---SDGNT--LPCDLVVVGVGV 239 (404)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEE---TTSCE--EECSEEEECCCE
T ss_pred HHHHHHHHHHhCCcEEEECCEEEEEEe-cCCcEEEEEe---CCCCE--EEcCEEEECcCC
Confidence 344556667788999999999999987 5678888876 56764 899999999993
No 192
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.84 E-value=1.1e-05 Score=84.58 Aligned_cols=43 Identities=23% Similarity=0.259 Sum_probs=37.2
Q ss_pred ccccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcc
Q 046556 44 VDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHT 86 (633)
Q Consensus 44 ~~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t 86 (633)
....+||+|||||++||+||+.|+++|.+|+|+|+....+|.+
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~ 68 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNA 68 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGG
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCcc
Confidence 3457999999999999999999999999999999976555443
No 193
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.82 E-value=1.1e-05 Score=85.33 Aligned_cols=41 Identities=20% Similarity=0.233 Sum_probs=36.7
Q ss_pred ccccEEEECCchHHHHHHHHHHhC-CCcEEEEeecCCCCCcc
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEH-GFNTACITKLFPTRSHT 86 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~-G~~V~vlEk~~~~~g~t 86 (633)
.++||+|||||++||+||..|+++ |.+|+|+|+....+|.+
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~ 47 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNA 47 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 468999999999999999999999 99999999987666554
No 194
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.79 E-value=0.00012 Score=74.44 Aligned_cols=50 Identities=12% Similarity=0.191 Sum_probs=40.8
Q ss_pred HHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccC
Q 046556 194 AMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATG 244 (633)
Q Consensus 194 a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 244 (633)
+.+.|++++.+++++++.. +++++.++.+.+..+|+...+.+|.||+|+|
T Consensus 200 l~~~gv~i~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 249 (319)
T 3cty_A 200 IKKRNIPYIMNAQVTEIVG-DGKKVTGVKYKDRTTGEEKLIETDGVFIYVG 249 (319)
T ss_dssp HHHTTCCEECSEEEEEEEE-SSSSEEEEEEEETTTCCEEEECCSEEEECCC
T ss_pred HhcCCcEEEcCCeEEEEec-CCceEEEEEEEEcCCCceEEEecCEEEEeeC
Confidence 3467999999999999987 5667888888654467766799999999998
No 195
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.78 E-value=2.4e-05 Score=83.64 Aligned_cols=33 Identities=30% Similarity=0.443 Sum_probs=30.8
Q ss_pred ccEEEECCchHHHHHHHHHHh---CCCcEEEEeecC
Q 046556 48 YDAVVVGAGGAGLRAAIGLSE---HGFNTACITKLF 80 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~---~G~~V~vlEk~~ 80 (633)
.||+|||||+||++||..|++ .|.+|+|+|+..
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 589999999999999999999 899999999863
No 196
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.78 E-value=1.4e-05 Score=85.76 Aligned_cols=41 Identities=34% Similarity=0.424 Sum_probs=36.2
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcc
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHT 86 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t 86 (633)
.++||+|||||++||+||+.|+++|.+|+|+|+....+|..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCce
Confidence 46899999999999999999999999999999976655543
No 197
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.75 E-value=1.9e-05 Score=85.74 Aligned_cols=41 Identities=24% Similarity=0.396 Sum_probs=36.7
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcc
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHT 86 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t 86 (633)
..+||+|||||++||+||+.|+++|.+|+|+|+....+|.+
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 46799999999999999999999999999999987666643
No 198
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.74 E-value=0.0002 Score=73.05 Aligned_cols=48 Identities=10% Similarity=0.080 Sum_probs=41.1
Q ss_pred CCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCC
Q 046556 197 HNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGG 245 (633)
Q Consensus 197 ~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 245 (633)
.||+++.++.++++.. +++++.++.+.+..+|+...+.+|.||+|+|-
T Consensus 222 ~gv~i~~~~~v~~i~~-~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 222 EKIEILYNTVALEAKG-DGKLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp TTEEEECSEEEEEEEE-SSSSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred CCeEEeecceeEEEEc-ccCcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 4999999999999988 56788889887766777678999999999993
No 199
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.74 E-value=0.00022 Score=76.73 Aligned_cols=32 Identities=22% Similarity=0.327 Sum_probs=30.2
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||||..|+-+|..+++.|.+|+|+|+.
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 201 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYM 201 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 46999999999999999999999999999985
No 200
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.74 E-value=0.00021 Score=78.14 Aligned_cols=58 Identities=14% Similarity=0.221 Sum_probs=42.6
Q ss_pred HHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCc
Q 046556 187 LHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGY 246 (633)
Q Consensus 187 ~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 246 (633)
...+.+.+++.|+++++++.|+++..++++++.++.+.. .+|+ ..+.||.||+|+|-.
T Consensus 258 ~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~-~~G~-~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 258 RAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMT-PNGE-MRIETDFVFLGLGEQ 315 (523)
T ss_dssp HHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEE-TTEE-EEEECSCEEECCCCE
T ss_pred HHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEE-CCCc-EEEEcCEEEECcCCc
Confidence 344556677889999999999999874456665554432 4664 358999999999944
No 201
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.73 E-value=2.4e-05 Score=83.11 Aligned_cols=41 Identities=22% Similarity=0.336 Sum_probs=36.0
Q ss_pred ccccEEEECCchHHHHHHHHHHhCC-CcEEEEeecCCCCCcc
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHG-FNTACITKLFPTRSHT 86 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G-~~V~vlEk~~~~~g~t 86 (633)
..+||+|||||++||+||+.|+++| .+|+|+|+....+|.+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKC 46 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcc
Confidence 4579999999999999999999999 8999999976665543
No 202
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.70 E-value=2e-05 Score=86.27 Aligned_cols=40 Identities=25% Similarity=0.349 Sum_probs=35.8
Q ss_pred ccccEEEECCchHHHHHHHHHHhCC-CcEEEEeecCCCCCc
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHG-FNTACITKLFPTRSH 85 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G-~~V~vlEk~~~~~g~ 85 (633)
..+||+|||||++||+||..|+++| .+|+|+|+....+|.
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr 47 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGR 47 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCc
Confidence 4579999999999999999999999 999999998766554
No 203
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.70 E-value=2.7e-05 Score=80.98 Aligned_cols=40 Identities=25% Similarity=0.243 Sum_probs=35.3
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeec-CCCCC
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL-FPTRS 84 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~-~~~~g 84 (633)
...+||+|||+|++||+||+.|+++|.+|+|+|+. ...+|
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGG 82 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGG 82 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBT
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCC
Confidence 45689999999999999999999999999999997 55433
No 204
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.70 E-value=2.2e-05 Score=85.46 Aligned_cols=41 Identities=29% Similarity=0.363 Sum_probs=35.5
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCc
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSH 85 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~ 85 (633)
...+||+|||||++||+||+.|+++|.+|+|+|+....+|.
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~ 51 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGK 51 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCc
Confidence 34689999999999999999999999999999998766553
No 205
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.69 E-value=0.00015 Score=77.69 Aligned_cols=33 Identities=30% Similarity=0.474 Sum_probs=31.1
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
..+|+|||+|++|+.+|..+++.|.+|+|+|+.
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~ 181 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDIL 181 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecC
Confidence 468999999999999999999999999999986
No 206
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.68 E-value=2.3e-05 Score=81.79 Aligned_cols=39 Identities=26% Similarity=0.272 Sum_probs=35.0
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcc
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHT 86 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t 86 (633)
+||+|||||++|++||..|+++|.+|+|+|+....+|.+
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 40 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNA 40 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcce
Confidence 699999999999999999999999999999986655543
No 207
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.67 E-value=9.9e-06 Score=86.48 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=30.8
Q ss_pred ccEEEECCchHHHHHHHHHHh--CCCcEEEEeecC
Q 046556 48 YDAVVVGAGGAGLRAAIGLSE--HGFNTACITKLF 80 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~--~G~~V~vlEk~~ 80 (633)
.||+|||||+||++||..|++ .|.+|+|+|+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCC
Confidence 589999999999999999999 789999999963
No 208
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.66 E-value=2.5e-05 Score=83.31 Aligned_cols=34 Identities=29% Similarity=0.358 Sum_probs=31.6
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
.+||+|||||++|+++|+.|+++|++|+|+||..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4799999999999999999999999999999964
No 209
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.65 E-value=6.7e-05 Score=81.28 Aligned_cols=43 Identities=30% Similarity=0.223 Sum_probs=37.2
Q ss_pred cccccEEEECCchHHHHHHHHHHhCC-CcEEEEeecCCCCCccc
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHG-FNTACITKLFPTRSHTV 87 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G-~~V~vlEk~~~~~g~t~ 87 (633)
...+||+|||||++||+||+.|+++| .+|+|+|+....+|...
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~ 50 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSR 50 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGC
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeee
Confidence 34689999999999999999999998 79999999876665544
No 210
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.63 E-value=0.00038 Score=75.13 Aligned_cols=32 Identities=25% Similarity=0.322 Sum_probs=30.1
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||+|..|+-+|..+++.|.+|+|+++.
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 210 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFL 210 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEecc
Confidence 36999999999999999999999999999985
No 211
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.63 E-value=0.00023 Score=76.89 Aligned_cols=53 Identities=11% Similarity=0.022 Sum_probs=37.9
Q ss_pred HHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCC
Q 046556 189 TLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGG 245 (633)
Q Consensus 189 ~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 245 (633)
.+.+.+++.||++++++.|+++..+++++++.+.+ .+|+ ..+.+|.||+|+|-
T Consensus 231 ~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~---~~G~-~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 231 TITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHM---NDSK-SIDDVDELIWTIGR 283 (479)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEE---TTSC-EEEEESEEEECSCE
T ss_pred HHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEE---CCCc-EEEEcCEEEECCCC
Confidence 34555667899999999999998733443444544 5673 35899999999994
No 212
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.62 E-value=4.3e-05 Score=81.55 Aligned_cols=57 Identities=18% Similarity=0.175 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..+.+.|.+.+++.|++|+++++|++|.. ++++++++.. +|+ .+.||.||+|+|.+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~-~~~~v~~v~~----~g~--~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIM-ENGKVVGVKS----EGE--VARCKQLICDPSYVP 290 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEE-ETTEEEEEEE----TTE--EEECSEEEECGGGCG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEE-eCCEEEEEEE----CCe--EEECCEEEECCCCCc
Confidence 57888999989899999999999999998 6788887753 465 389999999999775
No 213
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.62 E-value=0.00054 Score=73.46 Aligned_cols=32 Identities=19% Similarity=0.335 Sum_probs=30.3
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-+|+|||||..|+-+|..+++.|.+|+|+|+.
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 202 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGA 202 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcC
Confidence 47999999999999999999999999999985
No 214
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.62 E-value=0.00029 Score=74.99 Aligned_cols=53 Identities=19% Similarity=0.140 Sum_probs=39.8
Q ss_pred HHHHHHHHhCCCEEEEEEEEEEEEEc-cCCcEEEEEEEEcCCCeEEEEEcCeEEEccCC
Q 046556 188 HTLYGQAMKHNTQFFVEYFALDLIMN-SDGTCQGVIALNMEDGTLHRFRAASTILATGG 245 (633)
Q Consensus 188 ~~l~~~a~~~gv~i~~~~~v~~L~~d-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 245 (633)
..+.+.+++.|+++++++.|+++..+ +++++.++.+ .+|+ .+.||.||+|+|-
T Consensus 195 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~---~~G~--~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 195 AFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLC---EDGT--RLPADLVIAGIGL 248 (431)
T ss_dssp HHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEE---TTSC--EEECSEEEECCCE
T ss_pred HHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEe---CCCC--EEEcCEEEECCCC
Confidence 34455666789999999999999752 2467777765 5675 3899999999993
No 215
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.61 E-value=0.00024 Score=76.07 Aligned_cols=32 Identities=25% Similarity=0.240 Sum_probs=30.1
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||||..|+-+|..+++.|.+|+|+|+.
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 199 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMF 199 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeC
Confidence 36999999999999999999999999999985
No 216
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.61 E-value=0.00066 Score=73.53 Aligned_cols=56 Identities=14% Similarity=0.080 Sum_probs=40.8
Q ss_pred HHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccC
Q 046556 188 HTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATG 244 (633)
Q Consensus 188 ~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 244 (633)
..+.+.+++.||+++.++.++++..++++.+ .+.+.+..+|+...+.+|.||+|+|
T Consensus 229 ~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~vi~a~G 284 (488)
T 3dgz_A 229 SLVTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDTVLWAIG 284 (488)
T ss_dssp HHHHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESEEEECSC
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCEEEEccc
Confidence 3445556778999999999999977333433 4555554457766789999999999
No 217
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.60 E-value=4.1e-05 Score=83.20 Aligned_cols=57 Identities=14% Similarity=0.163 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHhCC-CEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 184 HALLHTLYGQAMKHN-TQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 184 ~~l~~~l~~~a~~~g-v~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..+.+.|.+.+.+.| ++|+++++|++|.. +++.+. |.+ .+|+ .+.||.||+|+|...
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~-~~~~v~-v~~---~~g~--~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVN-ERDAAR-VTA---RDGR--EFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEE-CSSSEE-EEE---TTCC--EEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEE-cCCEEE-EEE---CCCC--EEEcCEEEECCCHHH
Confidence 578888888888888 99999999999988 444432 333 4665 389999999999543
No 218
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.60 E-value=0.00028 Score=73.03 Aligned_cols=51 Identities=16% Similarity=0.174 Sum_probs=41.0
Q ss_pred HHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccC
Q 046556 192 GQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATG 244 (633)
Q Consensus 192 ~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 244 (633)
+..++.|++++.++.|+++.. +++++.++.+. ..+|+...+.+|.||+|+|
T Consensus 210 ~~~~~~gv~i~~~~~v~~i~~-~~~~v~~v~~~-~~~g~~~~i~~D~vi~a~G 260 (360)
T 3ab1_A 210 RARANGTIDVYLETEVASIEE-SNGVLTRVHLR-SSDGSKWTVEADRLLILIG 260 (360)
T ss_dssp HHHHHTSEEEESSEEEEEEEE-ETTEEEEEEEE-ETTCCEEEEECSEEEECCC
T ss_pred HHhhcCceEEEcCcCHHHhcc-CCCceEEEEEE-ecCCCeEEEeCCEEEECCC
Confidence 334567999999999999987 56788888775 2467656799999999999
No 219
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.59 E-value=0.00042 Score=72.50 Aligned_cols=32 Identities=25% Similarity=0.356 Sum_probs=30.3
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-+|+|||+|..|+.+|..+++.|.+|+|+|+.
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 177 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPC 177 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 47999999999999999999999999999985
No 220
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.59 E-value=0.0004 Score=75.31 Aligned_cols=56 Identities=18% Similarity=0.163 Sum_probs=40.2
Q ss_pred HHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccC
Q 046556 187 LHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATG 244 (633)
Q Consensus 187 ~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 244 (633)
...+.+.+++.|++++.+++|+++.. +++.+ .+.+.+..+|+...+.+|.||+|+|
T Consensus 242 ~~~l~~~l~~~gV~v~~~~~v~~i~~-~~~~~-~v~~~~~~~g~~~~i~~D~Vi~a~G 297 (491)
T 3urh_A 242 AKQLQRMLTKQGIDFKLGAKVTGAVK-SGDGA-KVTFEPVKGGEATTLDAEVVLIATG 297 (491)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEEE-ETTEE-EEEEEETTSCCCEEEEESEEEECCC
T ss_pred HHHHHHHHHhCCCEEEECCeEEEEEE-eCCEE-EEEEEecCCCceEEEEcCEEEEeeC
Confidence 34455566778999999999999987 44433 3455443346545689999999999
No 221
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.57 E-value=0.00064 Score=69.35 Aligned_cols=53 Identities=8% Similarity=0.086 Sum_probs=40.8
Q ss_pred HHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccC
Q 046556 190 LYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATG 244 (633)
Q Consensus 190 l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 244 (633)
+.+.+++.|++++.++.++++.. ++++.++.+.+..+|+...+.+|.||+|+|
T Consensus 197 l~~~l~~~gv~v~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G 249 (335)
T 2zbw_A 197 LMKAHEEGRLEVLTPYELRRVEG--DERVRWAVVFHNQTQEELALEVDAVLILAG 249 (335)
T ss_dssp HHHHHHTTSSEEETTEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred HHhccccCCeEEecCCcceeEcc--CCCeeEEEEEECCCCceEEEecCEEEEeec
Confidence 34445677999999999999976 366777777543367656799999999999
No 222
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.57 E-value=0.00032 Score=75.29 Aligned_cols=32 Identities=22% Similarity=0.329 Sum_probs=30.0
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||||.+|+.+|..+++.|.+|+|+|+.
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~ 199 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYM 199 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecC
Confidence 46999999999999999999999999999985
No 223
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.56 E-value=0.00064 Score=73.49 Aligned_cols=56 Identities=18% Similarity=0.160 Sum_probs=41.4
Q ss_pred HHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccC
Q 046556 188 HTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATG 244 (633)
Q Consensus 188 ~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 244 (633)
..+.+.+++.||+++.++.|+++..++++.+ .+.+.+..+++...+.+|.||+|+|
T Consensus 231 ~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G 286 (483)
T 3dgh_A 231 ELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIG 286 (483)
T ss_dssp HHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSC
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECcc
Confidence 3345566778999999999999987434444 4666554446666799999999999
No 224
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.51 E-value=0.00041 Score=74.32 Aligned_cols=53 Identities=15% Similarity=0.097 Sum_probs=39.6
Q ss_pred HHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCc
Q 046556 187 LHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGY 246 (633)
Q Consensus 187 ~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 246 (633)
...+.+.+++.|++++++++|+++.. +++++.++.. +|+ .+.||.||+|+|-.
T Consensus 194 ~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~v~~v~~----~g~--~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 194 TDILAKDYEAHGVNLVLGSKVAAFEE-VDDEIITKTL----DGK--EIKSDIAILCIGFR 246 (452)
T ss_dssp HHHHHHHHHHTTCEEEESSCEEEEEE-ETTEEEEEET----TSC--EEEESEEEECCCEE
T ss_pred HHHHHHHHHHCCCEEEcCCeeEEEEc-CCCeEEEEEe----CCC--EEECCEEEECcCCC
Confidence 34455666788999999999999976 4666655532 454 48999999999943
No 225
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.51 E-value=0.00048 Score=74.06 Aligned_cols=31 Identities=23% Similarity=0.292 Sum_probs=29.6
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|||+|..|+-+|..+++.|.+|+|+++.
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~ 198 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSFGSEVTVVALE 198 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEEcC
Confidence 6999999999999999999999999999985
No 226
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.49 E-value=5.4e-05 Score=81.73 Aligned_cols=38 Identities=24% Similarity=0.148 Sum_probs=34.2
Q ss_pred cccEEEECCchHHHHHHHHHHhCC--CcEEEEeecCCCCC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHG--FNTACITKLFPTRS 84 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G--~~V~vlEk~~~~~g 84 (633)
.+||+|||||++||+||+.|+++| .+|+|+|+....+|
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG 43 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGG 43 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCc
Confidence 479999999999999999999999 99999999765544
No 227
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.49 E-value=0.00049 Score=74.35 Aligned_cols=33 Identities=27% Similarity=0.400 Sum_probs=30.6
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.-+|+|||+|..|+-+|..+++.|.+|+|+++.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 218 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERN 218 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCG
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeC
Confidence 357999999999999999999999999999985
No 228
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.48 E-value=0.00077 Score=68.52 Aligned_cols=47 Identities=13% Similarity=0.247 Sum_probs=38.4
Q ss_pred hCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccC
Q 046556 196 KHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATG 244 (633)
Q Consensus 196 ~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 244 (633)
+.|++++.+++++++.. ++++.++.+.+..+|+...+.+|.||+|+|
T Consensus 200 ~~gv~i~~~~~v~~i~~--~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 246 (325)
T 2q7v_A 200 NPKMKFIWDTAVEEIQG--ADSVSGVKLRNLKTGEVSELATDGVFIFIG 246 (325)
T ss_dssp CTTEEEECSEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred cCCceEecCCceEEEcc--CCcEEEEEEEECCCCcEEEEEcCEEEEccC
Confidence 35899999999999976 367788887654477766799999999998
No 229
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.48 E-value=0.00043 Score=74.54 Aligned_cols=32 Identities=25% Similarity=0.265 Sum_probs=30.0
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||||..|+-.|..+++.|.+|+|+++.
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~ 209 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFA 209 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcC
Confidence 46999999999999999999999999999986
No 230
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.47 E-value=0.00079 Score=72.65 Aligned_cols=32 Identities=31% Similarity=0.279 Sum_probs=29.9
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||||..|+-.|..+++.|.+|+|+++.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRH 219 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeC
Confidence 36999999999999999999999999999985
No 231
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.46 E-value=9.2e-05 Score=76.23 Aligned_cols=33 Identities=33% Similarity=0.201 Sum_probs=31.4
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
+||+|||||+||+.||+.|+++|.+|+|+|+..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 589999999999999999999999999999865
No 232
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.45 E-value=0.00029 Score=74.53 Aligned_cols=52 Identities=23% Similarity=0.239 Sum_probs=39.4
Q ss_pred HHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCC
Q 046556 187 LHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGG 245 (633)
Q Consensus 187 ~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 245 (633)
...+.+.+++.||++++++.|+++.. ++++.++.+ .+|+. +.||.||+|+|-
T Consensus 188 ~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~---~dg~~--i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 188 GAWLRGLLTELGVQVELGTGVVGFSG--EGQLEQVMA---SDGRS--FVADSALICVGA 239 (410)
T ss_dssp HHHHHHHHHHHTCEEECSCCEEEEEC--SSSCCEEEE---TTSCE--EECSEEEECSCE
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEec--cCcEEEEEE---CCCCE--EEcCEEEEeeCC
Confidence 34455566778999999999999876 346666665 56764 889999999993
No 233
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.45 E-value=8.9e-05 Score=77.75 Aligned_cols=40 Identities=23% Similarity=0.272 Sum_probs=35.4
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcc
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHT 86 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t 86 (633)
++||+|||+|++|+++|..|+++|.+|+|+|+....+|.+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 42 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNS 42 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcc
Confidence 3799999999999999999999999999999976655543
No 234
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.43 E-value=7.2e-05 Score=78.32 Aligned_cols=34 Identities=29% Similarity=0.300 Sum_probs=31.5
Q ss_pred cEEEECCchHHHHHHHHHHhC--CCcEEEEeecCCC
Q 046556 49 DAVVVGAGGAGLRAAIGLSEH--GFNTACITKLFPT 82 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~--G~~V~vlEk~~~~ 82 (633)
||+|||||++||++|+.|+++ |.+|+|+||....
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 799999999999999999999 9999999997543
No 235
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.42 E-value=0.00078 Score=72.13 Aligned_cols=53 Identities=13% Similarity=0.071 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCc
Q 046556 186 LLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGY 246 (633)
Q Consensus 186 l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 246 (633)
+...+.+.+++.|+++++++.|+++.. +++++ .+.+ .++ .+.||.||+|+|-.
T Consensus 191 ~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v-~v~~---~~g---~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 191 MVAEVQKSLEKQAVIFHFEETVLGIEE-TANGI-VLET---SEQ---EISCDSGIFALNLH 243 (452)
T ss_dssp HHHHHHHHHHTTTEEEEETCCEEEEEE-CSSCE-EEEE---SSC---EEEESEEEECSCCB
T ss_pred HHHHHHHHHHHcCCEEEeCCEEEEEEc-cCCeE-EEEE---CCC---EEEeCEEEECcCCC
Confidence 344456667788999999999999987 56666 4444 344 48999999999954
No 236
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.42 E-value=0.00069 Score=73.47 Aligned_cols=52 Identities=12% Similarity=0.174 Sum_probs=38.1
Q ss_pred HHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCC
Q 046556 188 HTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGG 245 (633)
Q Consensus 188 ~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 245 (633)
..+.+.+++.||++++++.|+++.. +++..+.+.+ .+|+ .+.+|.||+|+|-
T Consensus 239 ~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~~~~v~~---~~G~--~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 239 EEVTKQLTANGIEIMTNENPAKVSL-NTDGSKHVTF---ESGK--TLDVDVVMMAIGR 290 (495)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEE-CTTSCEEEEE---TTSC--EEEESEEEECSCE
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEE-cCCceEEEEE---CCCc--EEEcCEEEECCCC
Confidence 3455566778999999999999987 3333334443 5675 4899999999993
No 237
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.42 E-value=0.00092 Score=72.43 Aligned_cols=33 Identities=24% Similarity=0.243 Sum_probs=30.5
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
-.|+|||||..|+-+|..+++.|.+|+|+++..
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 207 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG 207 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC
Confidence 469999999999999999999999999999863
No 238
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.41 E-value=0.00093 Score=68.10 Aligned_cols=50 Identities=10% Similarity=0.144 Sum_probs=39.8
Q ss_pred HhCCCEEEEEEEEEEEEEccCC--cEEEEEEEEcCCCeEEEEEcCeEEEccCC
Q 046556 195 MKHNTQFFVEYFALDLIMNSDG--TCQGVIALNMEDGTLHRFRAASTILATGG 245 (633)
Q Consensus 195 ~~~gv~i~~~~~v~~L~~d~~g--~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 245 (633)
++.||+++.++.++++.. +++ ++.++.+.+..+|+...+.+|.||+|+|-
T Consensus 206 ~~~gv~i~~~~~v~~i~~-~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 257 (333)
T 1vdc_A 206 SNPKIDVIWNSSVVEAYG-DGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGH 257 (333)
T ss_dssp TCTTEEEECSEEEEEEEE-SSSSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred hCCCeeEecCCceEEEeC-CCCccceeeEEEEecCCCceEEEecCEEEEEeCC
Confidence 357999999999999987 444 78788876544676667999999999993
No 239
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.41 E-value=4.8e-05 Score=81.09 Aligned_cols=31 Identities=26% Similarity=0.401 Sum_probs=28.2
Q ss_pred cEEEECCchHHHHHHHHHHhCC--CcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHG--FNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G--~~V~vlEk~ 79 (633)
.|||||||+||++||.+|++.+ .+|+|||+.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~ 36 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDR 36 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSS
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCC
Confidence 4999999999999999999865 799999985
No 240
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.41 E-value=0.00074 Score=73.33 Aligned_cols=55 Identities=16% Similarity=0.122 Sum_probs=38.9
Q ss_pred HHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 188 HTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 188 ~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
..+.+.+++.||++++++.|+++..++++. ..+.+ .+|+. .+.+|.||+|+|-..
T Consensus 221 ~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~---~~g~~-~~~~D~vi~a~G~~p 275 (500)
T 1onf_A 221 NVLENDMKKNNINIVTFADVVEIKKVSDKN-LSIHL---SDGRI-YEHFDHVIYCVGRSP 275 (500)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEE---TTSCE-EEEESEEEECCCBCC
T ss_pred HHHHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEE---CCCcE-EEECCEEEECCCCCc
Confidence 345556677899999999999998733332 33433 46754 489999999999544
No 241
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.40 E-value=0.00063 Score=73.67 Aligned_cols=54 Identities=15% Similarity=0.086 Sum_probs=39.0
Q ss_pred HHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCc
Q 046556 187 LHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGY 246 (633)
Q Consensus 187 ~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 246 (633)
...+.+.+++.|+++++++.|+++.. +++..+.+.+ .+|+ .+.+|.||+|+|-.
T Consensus 234 ~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~~~~v~~---~~G~--~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 234 RKQLTEQLRANGINVRTHENPAKVTK-NADGTRHVVF---ESGA--EADYDVVMLAIGRV 287 (490)
T ss_dssp HHHHHHHHHHTTEEEEETCCEEEEEE-CTTSCEEEEE---TTSC--EEEESEEEECSCEE
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEE-cCCCEEEEEE---CCCc--EEEcCEEEEccCCC
Confidence 34455666788999999999999987 3333334443 5675 48999999999943
No 242
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.40 E-value=9.2e-05 Score=80.43 Aligned_cols=40 Identities=30% Similarity=0.352 Sum_probs=35.5
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCc
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSH 85 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~ 85 (633)
..+||+|||||++||+||..|+++|.+|+|+|+....+|.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~ 71 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGR 71 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCc
Confidence 4579999999999999999999999999999997655553
No 243
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.38 E-value=0.00068 Score=73.06 Aligned_cols=53 Identities=21% Similarity=0.172 Sum_probs=40.0
Q ss_pred HHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCC
Q 046556 186 LLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGG 245 (633)
Q Consensus 186 l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 245 (633)
+...+.+.+++.|++++.++.|+++.. +++++. +.+ .+|+ .+.||.||+|+|-
T Consensus 204 ~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~-v~~---~~g~--~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 204 LSQMLRHDLEKNDVVVHTGEKVVRLEG-ENGKVA-RVI---TDKR--TLDADLVILAAGV 256 (472)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEE-EEE---ESSC--EEECSEEEECSCE
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEc-cCCeEE-EEE---eCCC--EEEcCEEEECCCC
Confidence 344455667788999999999999987 567665 433 3565 4899999999993
No 244
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.38 E-value=0.0011 Score=71.22 Aligned_cols=32 Identities=22% Similarity=0.263 Sum_probs=30.0
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||+|..|+-.|..+++.|.+|+|+++.
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 206 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFA 206 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecC
Confidence 46999999999999999999999999999985
No 245
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.37 E-value=0.0012 Score=70.98 Aligned_cols=32 Identities=22% Similarity=0.398 Sum_probs=30.1
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||||..|+-.|..+++.|.+|+|+++.
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 203 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFL 203 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcC
Confidence 46999999999999999999999999999985
No 246
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.34 E-value=0.00061 Score=68.65 Aligned_cols=49 Identities=10% Similarity=0.141 Sum_probs=40.8
Q ss_pred HhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCC
Q 046556 195 MKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGG 245 (633)
Q Consensus 195 ~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 245 (633)
++.|++++.++.++++.. +++++.++.+. ..+|+...+.+|.||+|+|-
T Consensus 194 ~~~gv~~~~~~~v~~i~~-~~~~~~~v~~~-~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 194 KNEKIELITSASVDEVYG-DKMGVAGVKVK-LKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp HCTTEEEECSCEEEEEEE-ETTEEEEEEEE-CTTSCEEEECCSCEEECSCE
T ss_pred hcCCeEEEeCcEEEEEEc-CCCcEEEEEEE-cCCCCeEEeecCeEEEEEcC
Confidence 467999999999999987 56788888775 35787677999999999993
No 247
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.34 E-value=0.0013 Score=70.81 Aligned_cols=32 Identities=22% Similarity=0.262 Sum_probs=30.0
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||+|..|+-.|..+++.|.+|+++++.
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 212 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAM 212 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecC
Confidence 36999999999999999999999999999985
No 248
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.32 E-value=0.00015 Score=77.79 Aligned_cols=36 Identities=31% Similarity=0.384 Sum_probs=33.1
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFP 81 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~ 81 (633)
..+||+|||||+||++||..|++.|++|+|+|+...
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~ 156 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDR 156 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence 457999999999999999999999999999999743
No 249
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.31 E-value=0.0014 Score=69.21 Aligned_cols=32 Identities=22% Similarity=0.330 Sum_probs=30.2
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||+|..|+-+|..+++.|.+|+|+++.
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 177 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQ 177 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeC
Confidence 46999999999999999999999999999986
No 250
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.31 E-value=0.0023 Score=68.58 Aligned_cols=47 Identities=17% Similarity=0.034 Sum_probs=37.2
Q ss_pred CCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCC
Q 046556 197 HNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGG 245 (633)
Q Consensus 197 ~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 245 (633)
.|++++.++.|+++.. +++. ..+.+.+..+|+...+.+|.||+|||-
T Consensus 329 ~~v~i~~~~~v~~v~~-~~~~-~~v~~~~~~~g~~~~~~~D~Vv~AtG~ 375 (463)
T 3s5w_A 329 PRHAFRCMTTVERATA-TAQG-IELALRDAGSGELSVETYDAVILATGY 375 (463)
T ss_dssp CCSEEETTEEEEEEEE-ETTE-EEEEEEETTTCCEEEEEESEEEECCCE
T ss_pred CCeEEEeCCEEEEEEe-cCCE-EEEEEEEcCCCCeEEEECCEEEEeeCC
Confidence 5999999999999987 4443 345665555788778999999999993
No 251
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.31 E-value=0.00093 Score=72.35 Aligned_cols=32 Identities=28% Similarity=0.348 Sum_probs=30.0
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||||..|+-.|..+++.|.+|+|+++.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~ 226 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVV 226 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcc
Confidence 36999999999999999999999999999985
No 252
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.29 E-value=0.0016 Score=65.79 Aligned_cols=47 Identities=15% Similarity=0.339 Sum_probs=39.1
Q ss_pred hCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccC
Q 046556 196 KHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATG 244 (633)
Q Consensus 196 ~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 244 (633)
+.||+++.++.++++.. + +++.++.+.+..+|+...+.+|.||+|+|
T Consensus 202 ~~gv~~~~~~~v~~i~~-~-~~~~~v~~~~~~~g~~~~~~~D~vv~a~G 248 (323)
T 3f8d_A 202 KPNVEFVLNSVVKEIKG-D-KVVKQVVVENLKTGEIKELNVNGVFIEIG 248 (323)
T ss_dssp CTTEEEECSEEEEEEEE-S-SSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CCCcEEEeCCEEEEEec-c-CceeEEEEEECCCCceEEEEcCEEEEEEC
Confidence 35999999999999976 3 67888888765568766799999999999
No 253
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.28 E-value=0.0011 Score=71.56 Aligned_cols=51 Identities=18% Similarity=0.240 Sum_probs=38.1
Q ss_pred HHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCC
Q 046556 188 HTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGG 245 (633)
Q Consensus 188 ~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 245 (633)
..+.+.+++.|++++.++.|+++.. +++++ .+.+ .+|+ .+.||.||+|+|-
T Consensus 236 ~~l~~~l~~~Gv~i~~~~~V~~i~~-~~~~v-~v~~---~~g~--~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 236 QLLNDAMVAKGISIIYEATVSQVQS-TENCY-NVVL---TNGQ--TICADRVMLATGR 286 (484)
T ss_dssp HHHHHHHHHHTCEEESSCCEEEEEE-CSSSE-EEEE---TTSC--EEEESEEEECCCE
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEEe-eCCEE-EEEE---CCCc--EEEcCEEEEeeCC
Confidence 3455566778999999999999987 45554 4443 5665 4889999999993
No 254
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.28 E-value=0.00098 Score=71.60 Aligned_cols=55 Identities=15% Similarity=0.164 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCc
Q 046556 186 LLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGY 246 (633)
Q Consensus 186 l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 246 (633)
+...+.+.+++.|++++.++.|+++.. +++.++.+.. ..+|+ +.||.||+|+|-.
T Consensus 213 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~~~~v~~--~~~g~---i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 213 MRRGLHAAMEEKGIRILCEDIIQSVSA-DADGRRVATT--MKHGE---IVADQVMLALGRM 267 (463)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEE-CTTSCEEEEE--SSSCE---EEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEECCCEEEEEEE-cCCCEEEEEE--cCCCe---EEeCEEEEeeCcc
Confidence 334455667788999999999999987 4333334441 25664 8899999999943
No 255
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.25 E-value=0.0035 Score=68.30 Aligned_cols=31 Identities=26% Similarity=0.323 Sum_probs=29.1
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|||+|..|+-.|..+++.|.+|+|+++.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 4999999999999999999999999999874
No 256
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.24 E-value=0.00053 Score=73.64 Aligned_cols=32 Identities=28% Similarity=0.387 Sum_probs=30.1
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||||.+|+-+|..+++.|.+|+|+++.
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 203 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEAR 203 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 36999999999999999999999999999986
No 257
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.22 E-value=0.00022 Score=76.91 Aligned_cols=40 Identities=30% Similarity=0.315 Sum_probs=34.1
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCC-cEEEEeecCCCCCc
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGF-NTACITKLFPTRSH 85 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~~~~~g~ 85 (633)
..+||+|||+|++|+++|+.|++.|. +|+|+|+....+|.
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~ 43 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGR 43 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCc
Confidence 45799999999999999999999998 89999997655443
No 258
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.19 E-value=0.0019 Score=70.15 Aligned_cols=32 Identities=22% Similarity=0.314 Sum_probs=29.9
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.++|||+|..|+-.|..+++.|.+|+++++.
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 214 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQ 214 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcC
Confidence 46999999999999999999999999999985
No 259
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.17 E-value=0.0016 Score=66.07 Aligned_cols=49 Identities=10% Similarity=0.179 Sum_probs=39.2
Q ss_pred HHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccC
Q 046556 194 AMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATG 244 (633)
Q Consensus 194 a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 244 (633)
+++.||+++.++.++++.. +++ +.++.+.+..+|+...+.+|.||+|+|
T Consensus 199 l~~~gv~~~~~~~v~~i~~-~~~-~~~v~~~~~~~g~~~~~~~D~vv~a~G 247 (332)
T 3lzw_A 199 LHASKVNVLTPFVPAELIG-EDK-IEQLVLEEVKGDRKEILEIDDLIVNYG 247 (332)
T ss_dssp HHHSSCEEETTEEEEEEEC-SSS-CCEEEEEETTSCCEEEEECSEEEECCC
T ss_pred HhcCCeEEEeCceeeEEec-CCc-eEEEEEEecCCCceEEEECCEEEEeec
Confidence 4567999999999999976 333 667877765566667799999999999
No 260
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.11 E-value=0.003 Score=69.63 Aligned_cols=31 Identities=32% Similarity=0.392 Sum_probs=29.7
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|||+|..|+-+|..+++.|.+|+++++.
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 183 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELA 183 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcC
Confidence 6999999999999999999999999999985
No 261
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.09 E-value=0.0013 Score=70.98 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=30.0
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||||..|+-.|..+++.|.+|+|+|+.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~ 217 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMM 217 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEEC
Confidence 46999999999999999999999999999985
No 262
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.05 E-value=0.00044 Score=78.73 Aligned_cols=36 Identities=28% Similarity=0.337 Sum_probs=33.2
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFP 81 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~ 81 (633)
..+||+|||||+||++||..|+++|++|+|+|+...
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~ 423 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 423 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 457999999999999999999999999999999754
No 263
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.04 E-value=0.0027 Score=68.17 Aligned_cols=32 Identities=16% Similarity=0.230 Sum_probs=29.8
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||+|..|+-.|..+++.|.+|+|+++.
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 208 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARN 208 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEEC
Confidence 36999999999999999999999999999985
No 264
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.03 E-value=0.00049 Score=77.68 Aligned_cols=36 Identities=31% Similarity=0.373 Sum_probs=33.2
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFP 81 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~ 81 (633)
..+||+|||||+||++||..|++.|++|+|+|+...
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~ 407 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSE 407 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 458999999999999999999999999999999743
No 265
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.03 E-value=0.0016 Score=67.65 Aligned_cols=32 Identities=31% Similarity=0.491 Sum_probs=30.2
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||||..|+-+|..+++.|.+|+|+++.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 175 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRG 175 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 47999999999999999999999999999985
No 266
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.02 E-value=0.002 Score=65.80 Aligned_cols=49 Identities=12% Similarity=0.182 Sum_probs=37.0
Q ss_pred HhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCC
Q 046556 195 MKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGG 245 (633)
Q Consensus 195 ~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 245 (633)
++.||+++.++.++++.. + +++.++.+.+..+|+...+.+|.||+|+|-
T Consensus 202 ~~~gV~v~~~~~v~~i~~-~-~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2a87_A 202 NNDKIRFLTNHTVVAVDG-D-TTVTGLRVRDTNTGAETTLPVTGVFVAIGH 250 (335)
T ss_dssp HCTTEEEECSEEEEEEEC-S-SSCCEEEEEEETTSCCEEECCSCEEECSCE
T ss_pred ccCCcEEEeCceeEEEec-C-CcEeEEEEEEcCCCceEEeecCEEEEccCC
Confidence 357999999999999976 3 355667665434565556899999999993
No 267
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.02 E-value=0.00047 Score=77.61 Aligned_cols=40 Identities=23% Similarity=0.342 Sum_probs=35.4
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCC
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRS 84 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g 84 (633)
...+||+|||+|++||+||+.|+++|.+|+|+|+....+|
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 4568999999999999999999999999999999765544
No 268
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.97 E-value=0.0028 Score=70.28 Aligned_cols=32 Identities=25% Similarity=0.388 Sum_probs=29.9
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||+|..|+-+|..+++.|.+|+++++.
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 219 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMA 219 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 46999999999999999999999999999975
No 269
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.93 E-value=0.004 Score=62.68 Aligned_cols=48 Identities=15% Similarity=0.107 Sum_probs=37.3
Q ss_pred CCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCC
Q 046556 197 HNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGG 245 (633)
Q Consensus 197 ~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 245 (633)
.+++.+..+.+.++.. .+....++.+.+...++...+.+|.||+|+|-
T Consensus 201 ~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~ 248 (314)
T 4a5l_A 201 PKIEVIWNSELVELEG-DGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGH 248 (314)
T ss_dssp TTEEEECSEEEEEEEE-SSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred cceeeEeeeeeEEEEe-eeeccceeEEeecccccceeeccccceEeccc
Confidence 4566667777888877 56778888887766677778999999999993
No 270
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.93 E-value=0.0038 Score=67.52 Aligned_cols=51 Identities=12% Similarity=0.150 Sum_probs=37.8
Q ss_pred HHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCC
Q 046556 188 HTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGG 245 (633)
Q Consensus 188 ~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 245 (633)
..+.+.+++.||++++++.|+++.. +++++ .+.+ .+|+ .+.||.||+|+|-
T Consensus 230 ~~~~~~l~~~GV~v~~~~~V~~i~~-~~~~~-~v~l---~dG~--~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 230 NWTMEKVRREGVKVMPNAIVQSVGV-SSGKL-LIKL---KDGR--KVETDHIVAAVGL 280 (493)
T ss_dssp HHHHHHHHTTTCEEECSCCEEEEEE-ETTEE-EEEE---TTSC--EEEESEEEECCCE
T ss_pred HHHHHHHHhcCCEEEeCCEEEEEEe-cCCeE-EEEE---CCCC--EEECCEEEECCCC
Confidence 3445566788999999999999976 44543 4443 5675 4899999999993
No 271
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.92 E-value=0.00065 Score=78.03 Aligned_cols=40 Identities=23% Similarity=0.342 Sum_probs=35.4
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCC
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRS 84 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g 84 (633)
....||+|||+|++||+||+.|+++|++|+|+|+....+|
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCC
Confidence 3457999999999999999999999999999999765544
No 272
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.80 E-value=0.00093 Score=78.96 Aligned_cols=54 Identities=19% Similarity=0.204 Sum_probs=41.2
Q ss_pred HHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEc---CC-------CeEEEEEcCeEEEccCCc
Q 046556 192 GQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNM---ED-------GTLHRFRAASTILATGGY 246 (633)
Q Consensus 192 ~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~---~~-------G~~~~i~A~~VVlAtGg~ 246 (633)
+.+++.|++++.++.++++.. +++++.++.+.+. .+ |+...+.||.||+|+|-.
T Consensus 378 ~~~~~~Gv~~~~~~~~~~i~~-~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~ 441 (1025)
T 1gte_A 378 ELAKEEKCEFLPFLSPRKVIV-KGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSV 441 (1025)
T ss_dssp HHHHHTTCEEECSEEEEEEEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEE
T ss_pred HHHHHcCCEEEeCCCceEEEc-cCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCC
Confidence 456678999999999999987 5788988876421 12 334578999999999963
No 273
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.80 E-value=0.0054 Score=65.45 Aligned_cols=32 Identities=25% Similarity=0.426 Sum_probs=30.1
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||+|..|+-.|..+++.|.+|+|+++.
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 180 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRG 180 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcC
Confidence 37999999999999999999999999999985
No 274
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.79 E-value=0.00064 Score=72.86 Aligned_cols=35 Identities=23% Similarity=0.311 Sum_probs=31.8
Q ss_pred cccEEEECCchHHHHHHHHHHh-C------CCcEEEEeecCC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSE-H------GFNTACITKLFP 81 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~-~------G~~V~vlEk~~~ 81 (633)
.+||+|||||+||+.||..|++ . |.+|+|+|+.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 4789999999999999999999 7 999999999743
No 275
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.78 E-value=0.00068 Score=73.51 Aligned_cols=36 Identities=17% Similarity=0.230 Sum_probs=31.7
Q ss_pred cccccEEEECCchHHHHHHHHHHhC--CCcEEEEeecC
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEH--GFNTACITKLF 80 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~--G~~V~vlEk~~ 80 (633)
+..+||+|||||+||++||..|++. |.+|+|||+..
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~ 46 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDP 46 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 3468999999999999999888776 88999999974
No 276
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=96.76 E-value=0.0077 Score=65.72 Aligned_cols=31 Identities=23% Similarity=0.319 Sum_probs=29.1
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.++|||||..|+-.|..+++.|.+|+|+++.
T Consensus 225 ~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~ 255 (542)
T 4b1b_A 225 KTLVVGASYVALECSGFLNSLGYDVTVAVRS 255 (542)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEeccc
Confidence 5999999999999999999999999999874
No 277
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.58 E-value=0.0012 Score=70.68 Aligned_cols=35 Identities=31% Similarity=0.326 Sum_probs=32.0
Q ss_pred cccEEEECCchHHHHHHHHHHhCC--CcEEEEeecCC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHG--FNTACITKLFP 81 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G--~~V~vlEk~~~ 81 (633)
.+||+|||+|+||+.||..|++.| .+|+|+|+...
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~ 42 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 42 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCc
Confidence 478999999999999999999988 99999999743
No 278
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.57 E-value=0.0054 Score=65.26 Aligned_cols=31 Identities=32% Similarity=0.452 Sum_probs=29.7
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|||||..|+-.|..+++.|.+|+|+++.
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 179 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRS 179 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred EEEEECCccchhhhHHHHHhcCCcceeeeee
Confidence 6999999999999999999999999999985
No 279
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.52 E-value=0.0076 Score=64.62 Aligned_cols=32 Identities=38% Similarity=0.430 Sum_probs=30.0
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||+|..|+-.|..+++.|.+|+|+++.
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 204 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEML 204 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeC
Confidence 36999999999999999999999999999985
No 280
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.52 E-value=0.0022 Score=70.94 Aligned_cols=56 Identities=13% Similarity=0.191 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEEEEEEEEEEccC-CcEEEEEEEEcCCCeEEEEEcCeEEEccC
Q 046556 184 HALLHTLYGQAMKHNTQFFVEYFALDLIMNSD-GTCQGVIALNMEDGTLHRFRAASTILATG 244 (633)
Q Consensus 184 ~~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 244 (633)
..+.+.|.+.++..|+++++++.|.+|+.+++ |+++||.. .+|+. ++|+.||....
T Consensus 378 g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~---~~Ge~--i~A~~VVs~~~ 434 (650)
T 1vg0_A 378 GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVID---QFGQR--IISKHFIIEDS 434 (650)
T ss_dssp THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEE---TTSCE--EECSEEEEEGG
T ss_pred hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEe---CCCCE--EEcCEEEEChh
Confidence 47888899999999999999999999998333 89999873 56765 89999888544
No 281
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.51 E-value=0.0042 Score=72.82 Aligned_cols=54 Identities=19% Similarity=0.246 Sum_probs=39.9
Q ss_pred HHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEc--C--CCeEEEEEcCeEEEccCCcC
Q 046556 194 AMKHNTQFFVEYFALDLIMNSDGTCQGVIALNM--E--DGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 194 a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~--~--~G~~~~i~A~~VVlAtGg~~ 247 (633)
+++.||+++.++.++++..++++++.++.+.+. . +|+...+.+|.||+|+|-..
T Consensus 326 l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P 383 (965)
T 2gag_A 326 AVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNP 383 (965)
T ss_dssp HHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEE
T ss_pred HHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCc
Confidence 356799999999999997622577888877541 1 25456799999999999543
No 282
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.44 E-value=0.012 Score=63.80 Aligned_cols=55 Identities=15% Similarity=0.073 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCe--EEEEEcCeEEEccC
Q 046556 185 ALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGT--LHRFRAASTILATG 244 (633)
Q Consensus 185 ~l~~~l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~--~~~i~A~~VVlAtG 244 (633)
.+...+.+.+++.||+++++++|+++. +++.+.... ..+|+ ...|.||.||.|+|
T Consensus 273 ~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~---~~dg~~~~~~i~ad~viwa~G 329 (502)
T 4g6h_A 273 KLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTK---HEDGKITEETIPYGTLIWATG 329 (502)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEE---CTTSCEEEEEEECSEEEECCC
T ss_pred HHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEE---ecCcccceeeeccCEEEEccC
Confidence 344445666778899999999999983 233222221 24554 24689999999999
No 283
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.00 E-value=0.017 Score=59.51 Aligned_cols=31 Identities=32% Similarity=0.455 Sum_probs=29.0
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|||+|..|+-+|..+++.|.+|+++++.
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~ 198 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKNGSDIALYTST 198 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECC-
T ss_pred EEEEECCCcCHHHHHHHHHhcCCeEEEEecC
Confidence 6999999999999999999999999999985
No 284
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=95.96 E-value=0.0023 Score=71.70 Aligned_cols=34 Identities=21% Similarity=0.328 Sum_probs=31.7
Q ss_pred cccEEEECCchHHHHHHHHHHhCC--------CcEEEEeecC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHG--------FNTACITKLF 80 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G--------~~V~vlEk~~ 80 (633)
..+|+|||+|++||+||+.|+++| .+|+|+|+..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccC
Confidence 468999999999999999999998 9999999976
No 285
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.88 E-value=0.0029 Score=66.14 Aligned_cols=33 Identities=21% Similarity=0.237 Sum_probs=30.6
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
-.|+|||||..|+-+|..|++.|.+|+|+++..
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~ 179 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILE 179 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC
Confidence 469999999999999999999999999999863
No 286
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.75 E-value=0.083 Score=52.89 Aligned_cols=31 Identities=13% Similarity=0.255 Sum_probs=29.6
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|||||..|+-+|..+++.|.+|+|+++.
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 177 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRR 177 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEecc
Confidence 6999999999999999999999999999985
No 287
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=95.60 E-value=0.032 Score=59.55 Aligned_cols=58 Identities=12% Similarity=0.117 Sum_probs=42.0
Q ss_pred HHHHHHHHHHh------CCCEEEEEEEEEEEEEccCCcEEEEEEEEc-------------CCCeEEEEEcCeEEEccCC
Q 046556 186 LLHTLYGQAMK------HNTQFFVEYFALDLIMNSDGTCQGVIALNM-------------EDGTLHRFRAASTILATGG 245 (633)
Q Consensus 186 l~~~l~~~a~~------~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~-------------~~G~~~~i~A~~VVlAtGg 245 (633)
+...|.+.+++ .|+++++++.++++.. + +++.++.+.+. .+|+...+.|+.||+|+|-
T Consensus 248 ~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~-~-~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~ 324 (456)
T 1lqt_A 248 NIKVLRGYADREPRPGHRRMVFRFLTSPIEIKG-K-RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGY 324 (456)
T ss_dssp HHHHHHHHHTCC-CTTSEEEEEECSEEEEEEEC-S-SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHHHhhcCCCCCCceEEEEeCCCCeEEec-C-CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccc
Confidence 34455555655 7899999999999976 3 56767766421 2466567999999999993
No 288
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=95.55 E-value=0.016 Score=57.41 Aligned_cols=48 Identities=19% Similarity=0.117 Sum_probs=38.0
Q ss_pred CcccCCCCceeeecCCCCCCcccCeeeecccccccccCCCCCChhhHHHHHHHHHHHHHHHHHHhCC
Q 046556 400 GIPTNHHGEVVTIKGDDPDEVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQRP 466 (633)
Q Consensus 400 Gi~vd~~~~vl~~d~~~~~T~ipGLyAaGe~a~~g~~Ga~rlgg~~l~~a~~~G~~Ag~~aa~~~~~ 466 (633)
.+.+|.+.+ |++|||||+|||++ .. .....|+..|++||.+++.++..
T Consensus 246 ~i~vd~~~~----------t~~~~vya~GD~~~-~~--------~~~~~A~~~g~~aa~~i~~~l~~ 293 (297)
T 3fbs_A 246 TIVTDPMKQ----------TTARGIFACGDVAR-PA--------GSVALAVGDGAMAGAAAHRSILF 293 (297)
T ss_dssp EECCCTTCB----------CSSTTEEECSGGGC-TT--------CCHHHHHHHHHHHHHHHHHHHHC
T ss_pred eEEeCCCCc----------cCCCCEEEEeecCC-ch--------HHHHHHHHhHHHHHHHHHHHHhh
Confidence 688887766 99999999999972 21 23557789999999999988754
No 289
>2lfc_A Fumarate reductase, flavoprotein subunit; structural genomics, northeast structural genomics consortiu PSI-biology; NMR {Lactobacillus plantarum}
Probab=95.31 E-value=0.0069 Score=54.69 Aligned_cols=28 Identities=25% Similarity=0.418 Sum_probs=22.3
Q ss_pred cceeee-ccccCC--CcEEECCCCCccccccC
Q 046556 291 GCLLLK-VGSRGE--GGILRNSEGERFMERYA 319 (633)
Q Consensus 291 ~~~~~~-~~~~g~--g~~~vn~~G~rf~~~~~ 319 (633)
+.++ + +.+++. |+++||.+|+||++|..
T Consensus 7 ~~l~-~~e~~rg~~~G~i~VN~~G~RFvnE~~ 37 (160)
T 2lfc_A 7 AKLT-TYASKQATDMGAIYVNSKGDRIVNESN 37 (160)
T ss_dssp CSCC-HHHHHHHHHHTCEEECSSSCEEESSCS
T ss_pred ceee-echhhccccCCEEEECCCCcCccCCCC
Confidence 3444 5 778888 89999999999999754
No 290
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=95.21 E-value=0.3 Score=53.17 Aligned_cols=33 Identities=15% Similarity=0.189 Sum_probs=30.7
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
-.|+|||+|..|+-+|..+++.|.+|+|+++.+
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 211 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTP 211 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 469999999999999999999999999999864
No 291
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=94.94 E-value=0.14 Score=55.88 Aligned_cols=33 Identities=15% Similarity=0.137 Sum_probs=30.7
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
-.|+|||+|..|+-.|..+++.+.+|+|+++.+
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~ 218 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTP 218 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCC
Confidence 469999999999999999999999999999864
No 292
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=94.83 E-value=0.047 Score=61.94 Aligned_cols=32 Identities=13% Similarity=0.095 Sum_probs=29.7
Q ss_pred ccEEEEC--CchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVG--AGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIG--gG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+||| ||..|+-+|..|++.|.+|+|+++.
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~ 562 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGV 562 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEecc
Confidence 3699999 9999999999999999999999985
No 293
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=94.74 E-value=0.072 Score=59.85 Aligned_cols=50 Identities=8% Similarity=0.104 Sum_probs=36.6
Q ss_pred HHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 190 LYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 190 l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
+.+.+++.||+++.++.|+++.. + ++.+. .+|+...+.+|.||+|+|-..
T Consensus 579 ~~~~l~~~GV~v~~~~~v~~i~~--~----~v~~~--~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 579 HRTTLLSRGVKMIPGVSYQKIDD--D----GLHVV--INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHTTCEEECSCEEEEEET--T----EEEEE--ETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHhcCCEEEeCcEEEEEeC--C----eEEEe--cCCeEEEEeCCEEEECCCccc
Confidence 44556778999999999998853 2 23332 367656799999999999543
No 294
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=93.72 E-value=0.054 Score=54.14 Aligned_cols=49 Identities=18% Similarity=0.195 Sum_probs=38.8
Q ss_pred cCcccCCCCceeeecCCCCCCcccCeeeecccccccccCCCCCChhhHHHHHHHHHHHHHHHHHHhC
Q 046556 399 GGIPTNHHGEVVTIKGDDPDEVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQR 465 (633)
Q Consensus 399 GGi~vd~~~~vl~~d~~~~~T~ipGLyAaGe~a~~g~~Ga~rlgg~~l~~a~~~G~~Ag~~aa~~~~ 465 (633)
|.|.||+++| |++||+||||||++.++ ..+..|+..|++||.+|..++.
T Consensus 252 G~I~vd~~~~----------Ts~p~IyA~GDv~~~~~--------~~~~~A~~~G~~AA~~i~~~L~ 300 (304)
T 4fk1_A 252 GTFVIDDFGR----------TSEKNIYLAGETTTQGP--------SSLIIAASQGNKAAIAINSDIT 300 (304)
T ss_dssp SSSCSSTTCB----------CSSTTEEECSHHHHTSC--------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEECcCCc----------cCCCCEEEEeccCCCcc--------hHHHHHHHHHHHHHHHHHHHHh
Confidence 6788998877 99999999999972121 2355678899999999988764
No 295
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=93.32 E-value=0.1 Score=55.27 Aligned_cols=57 Identities=14% Similarity=0.124 Sum_probs=38.9
Q ss_pred cCcccCCCCceeeecCCCCCC-cccCeeeecccccccccCCC--CC---ChhhHHHHHHHHHHHHHHHHHHhCCC
Q 046556 399 GGIPTNHHGEVVTIKGDDPDE-VVPGLMAAGEAACASVHGAN--RL---GANSLLDIVVFGRACANRVAEIQRPG 467 (633)
Q Consensus 399 GGi~vd~~~~vl~~d~~~~~T-~ipGLyAaGe~a~~g~~Ga~--rl---gg~~l~~a~~~G~~Ag~~aa~~~~~~ 467 (633)
|.|.||+..| | +.||+||+|||+ .+.+.+ .+ .......|...|++||+++..++.+.
T Consensus 284 G~i~Vd~~l~----------t~~~~~Ifa~GD~~--~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~ 346 (437)
T 3sx6_A 284 GFVLVDEHQR----------SKKYANIFAAGIAI--AIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGR 346 (437)
T ss_dssp SCBCBCTTSB----------BSSCTTEEECGGGB--CCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CcEEeChhcc----------CCCCCCEEEEEEEe--ccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5577776555 5 899999999997 322211 01 01234467889999999999998764
No 296
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=92.64 E-value=0.13 Score=54.29 Aligned_cols=57 Identities=11% Similarity=0.091 Sum_probs=38.1
Q ss_pred CcccCCCCceeeecCCCCCCcccCeeeecccccccccCC--CCC---ChhhHHHHHHHHHHHHHHHHHHhCCC
Q 046556 400 GIPTNHHGEVVTIKGDDPDEVVPGLMAAGEAACASVHGA--NRL---GANSLLDIVVFGRACANRVAEIQRPG 467 (633)
Q Consensus 400 Gi~vd~~~~vl~~d~~~~~T~ipGLyAaGe~a~~g~~Ga--~rl---gg~~l~~a~~~G~~Ag~~aa~~~~~~ 467 (633)
.|.||+..| -+++||+||+|||+ ++.+. ..+ .......|...|++||+++..++.+.
T Consensus 274 ~i~Vd~~l~---------t~~~~~Ifa~GD~~--~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~ 335 (430)
T 3h28_A 274 MVIVNRCFQ---------NPTYKNIFGVGVVT--AIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp CBCCCTTSB---------CSSSTTEEECSTTB--CCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEecCcccc---------CCCCCCEEEEEeee--ccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCC
Confidence 466666554 13899999999997 32221 000 01234567889999999999998764
No 297
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=92.55 E-value=0.12 Score=54.87 Aligned_cols=44 Identities=25% Similarity=0.225 Sum_probs=38.6
Q ss_pred ccccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCccc
Q 046556 44 VDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTV 87 (633)
Q Consensus 44 ~~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t~ 87 (633)
++.++||||||+|++||+||+.|+++|.+|+|+||....+|.+.
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 51 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAA 51 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc
Confidence 34578999999999999999999999999999999877766543
No 298
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=92.49 E-value=0.39 Score=49.57 Aligned_cols=41 Identities=27% Similarity=0.203 Sum_probs=34.1
Q ss_pred CcccCeeeecccccccccCCCCCChhhHHHHHHHHHHHHHHHHHHhCCCCC
Q 046556 419 EVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQRPGEK 469 (633)
Q Consensus 419 T~ipGLyAaGe~a~~g~~Ga~rlgg~~l~~a~~~G~~Ag~~aa~~~~~~~~ 469 (633)
+.+||||+||+.+ |+.| ..+|+..|.+||.+|+..+++...
T Consensus 326 k~~~~Lf~AGqi~--G~~G--------y~eAaa~Gl~AG~naa~~~~g~~p 366 (443)
T 3g5s_A 326 REAEGLYAAGVLA--GVEG--------YLESAATGFLAGLNAARKALGLPP 366 (443)
T ss_dssp TTEEEEEECGGGG--TBCS--------HHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cCCCCEEECcccc--ccHH--------HHHHHHhHHHHHHHHHHHhcCCCC
Confidence 5699999999997 5544 458999999999999999877543
No 299
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=92.24 E-value=0.18 Score=52.69 Aligned_cols=52 Identities=15% Similarity=0.072 Sum_probs=35.8
Q ss_pred HHHHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCcC
Q 046556 190 LYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYG 247 (633)
Q Consensus 190 l~~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 247 (633)
+.+.+.+.|++++.+ +|+.+.. ++.. +.+.+ .+++...+.+|.||+|||...
T Consensus 62 ~~~~~~~~gv~~~~~-~v~~i~~-~~~~---V~~~~-g~~~~~~~~~d~lViAtG~~~ 113 (409)
T 3h8l_A 62 LSEALPEKGIQFQEG-TVEKIDA-KSSM---VYYTK-PDGSMAEEEYDYVIVGIGAHL 113 (409)
T ss_dssp HHHHTGGGTCEEEEC-EEEEEET-TTTE---EEEEC-TTSCEEEEECSEEEECCCCEE
T ss_pred HHHHHhhCCeEEEEe-eEEEEeC-CCCE---EEEcc-CCcccceeeCCEEEECCCCCc
Confidence 445556789999877 8888865 3333 33433 344456789999999999754
No 300
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=91.95 E-value=0.12 Score=49.42 Aligned_cols=33 Identities=30% Similarity=0.537 Sum_probs=31.9
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
++||+|||||++|+.||+.|++.|.+|+|||+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 589999999999999999999999999999996
No 301
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.82 E-value=0.17 Score=44.98 Aligned_cols=32 Identities=25% Similarity=0.219 Sum_probs=29.8
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||+|..|...|..|.+.|.+|+++++.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 45999999999999999999999999999985
No 302
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=91.71 E-value=0.11 Score=54.99 Aligned_cols=42 Identities=19% Similarity=0.182 Sum_probs=37.0
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcc
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHT 86 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t 86 (633)
+.++||+|||+|++|++||..|+++|.+|+|+|+....+|.+
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~ 45 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGES 45 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccc
Confidence 356899999999999999999999999999999986665543
No 303
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=91.57 E-value=0.18 Score=53.19 Aligned_cols=57 Identities=11% Similarity=0.068 Sum_probs=36.9
Q ss_pred CcccCCCCceeeecCCCCCCcccCeeeecccccccccCCC---CCCh--hhHHHHHHHHHHHHHHHHHHhCCC
Q 046556 400 GIPTNHHGEVVTIKGDDPDEVVPGLMAAGEAACASVHGAN---RLGA--NSLLDIVVFGRACANRVAEIQRPG 467 (633)
Q Consensus 400 Gi~vd~~~~vl~~d~~~~~T~ipGLyAaGe~a~~g~~Ga~---rlgg--~~l~~a~~~G~~Ag~~aa~~~~~~ 467 (633)
.+.+|+..| .|+.||+||+|||+ .+...+ ...+ .+-..|.-.|+.+|++++..+++.
T Consensus 274 ~i~vd~~lq---------~t~~~~IfAiGD~a--~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~ 335 (430)
T 3hyw_A 274 MVIVNRCFQ---------NPTYKNIFGVGVVT--AIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp CBCCCTTSB---------CSSSTTEEECSTTB--CCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEeccccc---------CCCCCCEEEeccEE--ecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 355665554 38899999999997 332211 0111 122346778999999999988764
No 304
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.78 E-value=0.31 Score=42.37 Aligned_cols=32 Identities=22% Similarity=0.199 Sum_probs=30.0
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||.|..|...|..|.+.|.+|+++|+.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 35999999999999999999999999999985
No 305
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.59 E-value=0.26 Score=42.79 Aligned_cols=31 Identities=23% Similarity=0.381 Sum_probs=29.4
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|+|+|..|...|..|.+.|.+|+++|+.
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 4999999999999999999999999999985
No 306
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.99 E-value=0.3 Score=42.02 Aligned_cols=31 Identities=29% Similarity=0.379 Sum_probs=29.1
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|||+|..|...|..|.+.|.+|+++++.
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 5999999999999999999999999999974
No 307
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=88.69 E-value=0.36 Score=40.03 Aligned_cols=31 Identities=26% Similarity=0.305 Sum_probs=28.8
Q ss_pred cEEEECCchHHHHHHHHHHhCC-CcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHG-FNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G-~~V~vlEk~ 79 (633)
.|+|+|+|..|...+..|.+.| .+|+++++.
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 4999999999999999999999 899999874
No 308
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=88.34 E-value=0.41 Score=41.25 Aligned_cols=31 Identities=19% Similarity=0.216 Sum_probs=29.0
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|+|+|..|...|..|.+.|.+|+++++.
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4999999999999999999999999999874
No 309
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=88.14 E-value=0.37 Score=45.68 Aligned_cols=32 Identities=22% Similarity=0.355 Sum_probs=29.6
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|||||||..|...|..|.+.|++|+|++..
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 46999999999999999999999999999863
No 310
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=88.04 E-value=0.58 Score=41.22 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=29.4
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|+|+|..|...|..|.+.|.+|+++++.
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 4999999999999999999999999999985
No 311
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=87.67 E-value=0.34 Score=47.45 Aligned_cols=32 Identities=19% Similarity=0.309 Sum_probs=29.8
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
--|||||||-.|...|..|.+.|++|+|++..
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 35999999999999999999999999999974
No 312
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=87.12 E-value=0.43 Score=45.57 Aligned_cols=39 Identities=18% Similarity=0.210 Sum_probs=31.5
Q ss_pred CcccCeeeecccccccccCCCCCChhhHHHHHHHHHHHHHHHHHHhCCC
Q 046556 419 EVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQRPG 467 (633)
Q Consensus 419 T~ipGLyAaGe~a~~g~~Ga~rlgg~~l~~a~~~G~~Ag~~aa~~~~~~ 467 (633)
++.++||+|||++ .| .++..|+.+|+.||+.+.++++..
T Consensus 292 ~~~~~v~l~GDa~-~g---------~gv~~A~~sG~~aA~~I~~~L~~e 330 (336)
T 3kkj_A 292 DADLGIYVCGDWC-LS---------GRVEGAWLSGQEAARRLLEHLQLE 330 (336)
T ss_dssp ETTTTEEECCGGG-TT---------SSHHHHHHHHHHHHHHHHHHTTC-
T ss_pred eCCCCEEEEeccc-CC---------cCHHHHHHHHHHHHHHHHHHhhcc
Confidence 6789999999975 21 236678999999999999998753
No 313
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=86.94 E-value=0.9 Score=50.12 Aligned_cols=42 Identities=17% Similarity=0.139 Sum_probs=37.6
Q ss_pred cccccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcc
Q 046556 45 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHT 86 (633)
Q Consensus 45 ~~~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t 86 (633)
+.+|||||||+|..|+..|..|++.|.+|++|||....+|+.
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~ 47 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNW 47 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcc
Confidence 347999999999999999999999999999999987766654
No 314
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=86.74 E-value=0.5 Score=43.05 Aligned_cols=32 Identities=22% Similarity=0.199 Sum_probs=29.6
Q ss_pred ccEEEECCchHHHHHHHHHHhC-CCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEH-GFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~-G~~V~vlEk~ 79 (633)
-.|+|||.|..|...|..|.+. |.+|+++|+.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 3599999999999999999999 9999999985
No 315
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=86.21 E-value=0.7 Score=48.78 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=30.6
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeecCCC
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPT 82 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~ 82 (633)
.|+|||.|.+|+++|..|+++|++|++.|.....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred EEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 4899999999999999999999999999986543
No 316
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=85.76 E-value=0.6 Score=48.35 Aligned_cols=33 Identities=27% Similarity=0.264 Sum_probs=30.6
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
...|+|||+|.+|+.+|..|...|++|+++|+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 222 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVR 222 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCC
Confidence 457999999999999999999999999999985
No 317
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=84.57 E-value=0.83 Score=42.92 Aligned_cols=31 Identities=13% Similarity=0.240 Sum_probs=29.2
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|||+|..|...|..|.+.|.+|+++|+.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 3899999999999999999999999999975
No 318
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=84.01 E-value=0.89 Score=45.21 Aligned_cols=31 Identities=19% Similarity=0.269 Sum_probs=29.0
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||+|.-|...|..++++|++|+++++.
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 4999999999999999999999999999874
No 319
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=83.87 E-value=0.85 Score=46.74 Aligned_cols=32 Identities=22% Similarity=0.158 Sum_probs=29.5
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|+|+|.+|+.++..|+..|++|+++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46999999999999999999999999999874
No 320
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=83.23 E-value=0.71 Score=47.37 Aligned_cols=33 Identities=30% Similarity=0.311 Sum_probs=30.4
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
...|+|||+|..|+.+|..|...|++|+++++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 216 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVR 216 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCC
Confidence 457999999999999999999999999999975
No 321
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=83.19 E-value=1.4 Score=46.91 Aligned_cols=39 Identities=28% Similarity=0.437 Sum_probs=35.1
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCc
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSH 85 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~ 85 (633)
++||+|||+|++||+||+.|+++|.+|+|+|+....+|.
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr 77 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGR 77 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 389999999999999999999999999999997665544
No 322
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=83.05 E-value=0.83 Score=48.57 Aligned_cols=32 Identities=9% Similarity=-0.035 Sum_probs=30.0
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||+|.+|+-.|..+++.|.+|+|+++.
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~ 229 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYR 229 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECS
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEEC
Confidence 46999999999999999999999999999975
No 323
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=82.89 E-value=0.86 Score=48.09 Aligned_cols=32 Identities=13% Similarity=-0.055 Sum_probs=29.8
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCc-EEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFN-TACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~-V~vlEk~ 79 (633)
-.|+|||+|.+|+-.|..+++.|.+ |+|+++.
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~ 245 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLG 245 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCC
Confidence 4699999999999999999999998 9999885
No 324
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=82.81 E-value=0.76 Score=48.69 Aligned_cols=31 Identities=23% Similarity=0.167 Sum_probs=29.4
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|||.|.+|+++|..|.++|++|.+.|+.
T Consensus 11 ~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~ 41 (451)
T 3lk7_A 11 KVLVLGLARSGEAAARLLAKLGAIVTVNDGK 41 (451)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 5999999999999999999999999999985
No 325
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=82.49 E-value=0.94 Score=47.11 Aligned_cols=32 Identities=28% Similarity=0.284 Sum_probs=29.5
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||+|.+|+.+|..|...|++|+++++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~ 204 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTR 204 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 46999999999999999999999999999874
No 326
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=82.44 E-value=1 Score=45.57 Aligned_cols=32 Identities=9% Similarity=0.094 Sum_probs=29.3
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
..|.|||+|..|...|..++..|. +|+|+|..
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 469999999999999999999998 99999875
No 327
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=81.94 E-value=0.89 Score=43.88 Aligned_cols=35 Identities=26% Similarity=0.287 Sum_probs=31.1
Q ss_pred cccEEEECCchHHHHHHHHHHhCCC-cEEEEeecCC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGF-NTACITKLFP 81 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~~~ 81 (633)
...|+|||+|..|..+|..|++.|. +++|+|....
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 4579999999999999999999997 8999998643
No 328
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=81.68 E-value=1.2 Score=45.51 Aligned_cols=31 Identities=23% Similarity=0.217 Sum_probs=29.1
Q ss_pred EEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 50 AVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 50 VlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
|+|||||..|..+|+.|.+.|++|++++..+
T Consensus 4 I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 4 ICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 8999999999999999999999999999754
No 329
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=81.51 E-value=1.2 Score=44.62 Aligned_cols=32 Identities=25% Similarity=0.298 Sum_probs=29.5
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|.|||+|.-|..-|..++.+|++|+|+|..
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 35999999999999999999999999999974
No 330
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=81.36 E-value=1.1 Score=46.23 Aligned_cols=33 Identities=24% Similarity=0.224 Sum_probs=29.9
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.-.|+|||+|.+|+.+|..|...|++|+++++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~ 204 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVR 204 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 356999999999999999999999999999875
No 331
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=81.35 E-value=0.55 Score=46.28 Aligned_cols=46 Identities=26% Similarity=0.499 Sum_probs=38.4
Q ss_pred CcccCeeeecccccccccCCCCCChhhHHHHHHHHHHHHHHHHHHhCC
Q 046556 419 EVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQRP 466 (633)
Q Consensus 419 T~ipGLyAaGe~a~~g~~Ga~rlgg~~l~~a~~~G~~Ag~~aa~~~~~ 466 (633)
|.+||+|++|+++ ..++|..+++. .+..++.+|..||..+.++++.
T Consensus 231 ~~~p~i~a~G~~~-~~~~g~~~~gp-~~~~~~~sG~~~a~~i~~~l~~ 276 (284)
T 1rp0_A 231 EVVPGMIVTGMEV-AEIDGAPRMGP-TFGAMMISGQKAGQLALKALGL 276 (284)
T ss_dssp EEETTEEECTHHH-HHHHTCEECCS-CCHHHHHHHHHHHHHHHHHTTC
T ss_pred cccCCEEEEeeeh-hhhcCCCCcCh-HHHHHHHhHHHHHHHHHHHhhh
Confidence 6789999999987 56788877765 4667789999999999998864
No 332
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=81.34 E-value=1 Score=46.09 Aligned_cols=34 Identities=29% Similarity=0.411 Sum_probs=30.9
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
.+..|+|+|+|.||+.+|-.+...|+ +|+++|+.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 34679999999999999999999999 99999985
No 333
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=80.68 E-value=1.5 Score=44.25 Aligned_cols=37 Identities=16% Similarity=0.238 Sum_probs=31.9
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCC-cEEEEeecCCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGF-NTACITKLFPT 82 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~~~~ 82 (633)
....|+|||+|..|+.+|..|+..|. +++|+|.....
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve 70 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 70 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEec
Confidence 35679999999999999999999997 78899886543
No 334
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=80.51 E-value=1.3 Score=45.39 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=29.6
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|+|+|..|..+|..|+..|++|+++++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 46999999999999999999999999999874
No 335
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=80.49 E-value=1.3 Score=44.40 Aligned_cols=31 Identities=19% Similarity=0.373 Sum_probs=29.2
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||+|.-|...|..|++.|.+|.++.+.
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4999999999999999999999999999885
No 336
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=80.30 E-value=1.3 Score=43.21 Aligned_cols=31 Identities=19% Similarity=0.297 Sum_probs=28.6
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.++|+|+|.+|..+|..|++.|.+|+|+.+.
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 5999999999999999999999999998774
No 337
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=79.70 E-value=0.86 Score=39.65 Aligned_cols=32 Identities=16% Similarity=0.117 Sum_probs=28.6
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
..|+|||+|..|...|..|.+.|.+|+++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 35999999999999999999999998888874
No 338
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=79.14 E-value=1.6 Score=45.01 Aligned_cols=32 Identities=34% Similarity=0.365 Sum_probs=29.5
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||+|..|..+|..|+..|++|+++++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46999999999999999999999999999874
No 339
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=79.12 E-value=1.2 Score=47.54 Aligned_cols=38 Identities=26% Similarity=0.322 Sum_probs=30.3
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeecCCCCCcc
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHT 86 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~~~g~t 86 (633)
+|||||||++||+||+.|+++|++|+|+|+....+|.+
T Consensus 3 ~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~ 40 (501)
T 4dgk_A 3 PTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRA 40 (501)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------
T ss_pred CEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcE
Confidence 69999999999999999999999999999987766543
No 340
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=78.90 E-value=1.4 Score=44.03 Aligned_cols=31 Identities=26% Similarity=0.345 Sum_probs=29.2
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||+|.-|...|..|++.|.+|.++.+.
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 4999999999999999999999999999985
No 341
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=78.89 E-value=1.2 Score=48.52 Aligned_cols=33 Identities=15% Similarity=0.224 Sum_probs=30.6
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
-.|+|||+|..|+-+|..+++.+.+|+|+++.+
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 224 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSA 224 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 469999999999999999999999999999864
No 342
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=78.42 E-value=1.5 Score=43.34 Aligned_cols=36 Identities=25% Similarity=0.304 Sum_probs=31.9
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCC-cEEEEeecCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGF-NTACITKLFP 81 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~~~ 81 (633)
....|+|||.|..|..+|..|++.|. ++.|+|....
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 45689999999999999999999997 8999998654
No 343
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=78.05 E-value=1.9 Score=42.29 Aligned_cols=31 Identities=26% Similarity=0.377 Sum_probs=29.0
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||+|.-|...|..++++|++|+++++.
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4999999999999999999999999999874
No 344
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=77.94 E-value=1.8 Score=43.72 Aligned_cols=31 Identities=23% Similarity=0.262 Sum_probs=29.0
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||+|.-|...|..|+++|.+|.++++.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 4999999999999999999999999999873
No 345
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=77.78 E-value=1.8 Score=42.23 Aligned_cols=32 Identities=25% Similarity=0.530 Sum_probs=29.4
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
..++|||+|.+|-++|..|++.|.+|.|+.|.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt 150 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRS 150 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999875
No 346
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=77.72 E-value=1.6 Score=44.74 Aligned_cols=34 Identities=26% Similarity=0.355 Sum_probs=30.6
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
.+..|+|+|+|.+|..+|-.|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 34679999999999999999999998 79999985
No 347
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=77.70 E-value=2 Score=43.78 Aligned_cols=32 Identities=22% Similarity=0.238 Sum_probs=29.6
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
..|.|||+|.-|.+.|..++++|.+|.++++.
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 35999999999999999999999999999874
No 348
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=77.27 E-value=1.9 Score=43.09 Aligned_cols=31 Identities=23% Similarity=0.343 Sum_probs=28.7
Q ss_pred cEEEECCchHHHHHHHHHHhCCC--cEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGF--NTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~--~V~vlEk~ 79 (633)
.|.|||+|..|...|..+++.|. +|+++++.
T Consensus 9 kI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 9 KLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 59999999999999999999998 89999874
No 349
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=77.25 E-value=1.7 Score=46.04 Aligned_cols=32 Identities=28% Similarity=0.275 Sum_probs=29.6
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||+|..|...|..|.+.|++|+|+++.
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 35999999999999999999999999999974
No 350
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=76.86 E-value=2 Score=43.25 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=28.2
Q ss_pred cEEEECCchHHHH-HHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLR-AAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~-AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||.|.+|++ +|..|.++|++|.+.|+.
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEEEECHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 4899999999996 788899999999999985
No 351
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=76.63 E-value=2.1 Score=42.72 Aligned_cols=32 Identities=22% Similarity=0.348 Sum_probs=29.0
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
..++|+|+|.+|.++|..|++.|. +|+|+.|.
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 469999999999999999999998 79998874
No 352
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=76.55 E-value=1.9 Score=45.64 Aligned_cols=32 Identities=28% Similarity=0.248 Sum_probs=29.1
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
--|+|+|+|..|..+|..|+..|++|++.+..
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 35999999999999999999999999998864
No 353
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=76.37 E-value=1.7 Score=42.99 Aligned_cols=31 Identities=23% Similarity=0.326 Sum_probs=29.2
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||+|.-|...|..|++.|.+|.++++.
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCTTCEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEec
Confidence 4999999999999999999999999999985
No 354
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=75.97 E-value=2.2 Score=41.73 Aligned_cols=32 Identities=19% Similarity=0.263 Sum_probs=29.3
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
.|.|||+|.-|...|..+++.|.+|.++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 38999999999999999999999999998853
No 355
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=75.72 E-value=1.1 Score=45.39 Aligned_cols=45 Identities=29% Similarity=0.553 Sum_probs=36.9
Q ss_pred CcccCeeeecccccccccCCCCCChhhHHHHHHHHHHHHHHHHHHhC
Q 046556 419 EVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQR 465 (633)
Q Consensus 419 T~ipGLyAaGe~a~~g~~Ga~rlgg~~l~~a~~~G~~Ag~~aa~~~~ 465 (633)
.-+||||++|=.+ ..++|.+|+| --++..+.+|+.||+.|.+.++
T Consensus 291 ~v~~gl~~~gm~~-~~~~g~~rmg-p~fg~m~~sg~~~a~~~~~~~~ 335 (344)
T 3jsk_A 291 EIVPGLIVGGMEL-SEIDGANRMG-PTFGAMALSGVKAAHEAIRVFD 335 (344)
T ss_dssp EEETTEEECGGGH-HHHHTCEECC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEcCCEEEechhh-HhhcCCCCCC-cccceeeecCHHHHHHHHHHHH
Confidence 4589999999987 5899999986 3455668999999999887653
No 356
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=75.72 E-value=2.4 Score=44.16 Aligned_cols=31 Identities=16% Similarity=0.205 Sum_probs=29.6
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|||||.|-.|...|..|.+.|.+|++||+.
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~g~~vvvId~d 36 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSSGVKMVVLDHD 36 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 4999999999999999999999999999985
No 357
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=75.66 E-value=1.7 Score=42.41 Aligned_cols=32 Identities=22% Similarity=0.294 Sum_probs=29.2
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
..++|+|+|.+|..+|..|++.|.+|+|+.+.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 35999999999999999999999999999874
No 358
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=75.09 E-value=2.3 Score=44.54 Aligned_cols=33 Identities=21% Similarity=0.248 Sum_probs=30.2
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
...|.|||.|-.||..|..+++.|.+|+.+|-.
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did 53 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVN 53 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECC
Confidence 356999999999999999999999999999864
No 359
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=75.03 E-value=2.4 Score=45.97 Aligned_cols=37 Identities=16% Similarity=0.238 Sum_probs=32.1
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCC-cEEEEeecCCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGF-NTACITKLFPT 82 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~~~~ 82 (633)
....|+|||+|..|+.+|..|+..|. +++|+|.....
T Consensus 326 ~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve 363 (598)
T 3vh1_A 326 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 363 (598)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCccc
Confidence 34679999999999999999999997 79999876543
No 360
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=74.98 E-value=2 Score=42.51 Aligned_cols=33 Identities=15% Similarity=0.119 Sum_probs=30.3
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
..|.|||.|.-|...|..+++.|++|+++++..
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 469999999999999999999999999999863
No 361
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=74.96 E-value=2.2 Score=42.31 Aligned_cols=32 Identities=19% Similarity=0.242 Sum_probs=28.8
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
..|+|||+|.+|..+|..|++.|. +|+|+.+.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 359999999999999999999998 89998874
No 362
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=74.93 E-value=2.4 Score=41.73 Aligned_cols=32 Identities=34% Similarity=0.404 Sum_probs=28.6
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
..++|+|+|.+|.++|..|++.|. +|.|+.+.
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 469999999999999999999998 69888774
No 363
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=74.82 E-value=2.5 Score=39.33 Aligned_cols=31 Identities=13% Similarity=0.242 Sum_probs=29.1
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||+|..|.+.|..+++.|.+|.++++.
T Consensus 21 ~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 21 EITIFGKGNMGQAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 5999999999999999999999999999875
No 364
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=74.60 E-value=2.3 Score=45.24 Aligned_cols=32 Identities=22% Similarity=0.514 Sum_probs=29.7
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
..|.|||.|.-|+..|..++++|.+|+++++.
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 45999999999999999999999999999874
No 365
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=74.53 E-value=2.6 Score=45.77 Aligned_cols=37 Identities=16% Similarity=0.238 Sum_probs=32.4
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCC-cEEEEeecCCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGF-NTACITKLFPT 82 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~~~~ 82 (633)
....|+|||+|..|+.+|..|+..|. +++|+|.+...
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve 362 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 362 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCc
Confidence 45679999999999999999999997 89999987543
No 366
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=74.48 E-value=2.4 Score=42.93 Aligned_cols=31 Identities=23% Similarity=0.159 Sum_probs=28.9
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||+|..|...|..|++.|.+|.++++.
T Consensus 6 ki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 5999999999999999999999999999874
No 367
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=74.34 E-value=2 Score=41.35 Aligned_cols=35 Identities=23% Similarity=0.286 Sum_probs=30.6
Q ss_pred cccEEEECCchHHHHHHHHHHhCCC-cEEEEeecCC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGF-NTACITKLFP 81 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~~~ 81 (633)
...|+|||.|..|..+|..|++.|. +++|+|....
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 4679999999999999999999997 7888887643
No 368
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=74.32 E-value=2.9 Score=41.83 Aligned_cols=31 Identities=23% Similarity=0.387 Sum_probs=28.4
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||+|..|+-+|..+++.| +|+++.+.
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~ 194 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQH 194 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECC
Confidence 47999999999999999999998 69999875
No 369
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=74.25 E-value=2.3 Score=41.63 Aligned_cols=32 Identities=22% Similarity=0.172 Sum_probs=29.2
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
..++|||+|.+|.++|..|++.|. +|.|+.|.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 150 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRT 150 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 469999999999999999999998 89999875
No 370
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=74.11 E-value=2.4 Score=41.91 Aligned_cols=31 Identities=29% Similarity=0.443 Sum_probs=28.8
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||+|..|...|..+++.|.+|+++++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 4999999999999999999999999999874
No 371
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=73.97 E-value=3 Score=40.19 Aligned_cols=31 Identities=32% Similarity=0.463 Sum_probs=28.9
Q ss_pred cEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
.++|||+|.+|-+++..|.+.|. +|.|+.|.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 69999999999999999999998 89999874
No 372
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=73.75 E-value=1.6 Score=43.91 Aligned_cols=43 Identities=23% Similarity=0.329 Sum_probs=36.0
Q ss_pred cccCeeeecccccccccCCCCCChhhHHHHHHHHHHHHHHHHHHh
Q 046556 420 VVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQ 464 (633)
Q Consensus 420 ~ipGLyAaGe~a~~g~~Ga~rlgg~~l~~a~~~G~~Ag~~aa~~~ 464 (633)
-+||||++|-.+ ..++|.+|+| --++..+.+|+.||+.|.+.+
T Consensus 282 ~~~~~~~~g~~~-~~~~~~~r~g-~~fg~m~~sg~~~a~~~~~~~ 324 (326)
T 2gjc_A 282 GVDNMYFAGMEV-AELDGLNRMG-PTFGAMALSGVHAAEQILKHF 324 (326)
T ss_dssp TSTTEEECTHHH-HHHHTCCBCC-SCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCEEECChHH-HHhcCCCCCC-hhhhhhhhhhHHHHHHHHHHh
Confidence 699999999987 5899999986 445667899999999987754
No 373
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=73.70 E-value=2.8 Score=42.02 Aligned_cols=31 Identities=26% Similarity=0.351 Sum_probs=29.0
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||+|.-|..-|..++++|++|+++++.
T Consensus 8 kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred eEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4999999999999999999999999999874
No 374
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=73.51 E-value=2.4 Score=42.34 Aligned_cols=31 Identities=16% Similarity=0.243 Sum_probs=28.7
Q ss_pred cEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
.|.|||+|..|...|..+++.|. +|++++..
T Consensus 6 kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 6 KIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 59999999999999999999998 99999874
No 375
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=73.44 E-value=2.9 Score=41.69 Aligned_cols=32 Identities=22% Similarity=0.324 Sum_probs=28.8
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
..++|+|+|.+|-++|..|++.|. +|.|+.|.
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 469999999999999999999998 78888874
No 376
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=73.31 E-value=2.7 Score=44.44 Aligned_cols=56 Identities=20% Similarity=0.275 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHhC--------CCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCCc
Q 046556 184 HALLHTLYGQAMKH--------NTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGY 246 (633)
Q Consensus 184 ~~l~~~l~~~a~~~--------gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 246 (633)
..+...|.+.+.+. |++|++++.|++|.. +++.++ |.+ .+|+. +.||.||+|++..
T Consensus 206 ~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~-~~~~v~-v~~---~~g~~--~~ad~vI~a~~~~ 269 (472)
T 1b37_A 206 EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKY-SPGGVT-VKT---EDNSV--YSADYVMVSASLG 269 (472)
T ss_dssp THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEE-CSSCEE-EEE---TTSCE--EEESEEEECSCHH
T ss_pred HHHHHHHHHhccccccccccccccEEEcCCEEEEEEE-cCCcEE-EEE---CCCCE--EEcCEEEEecCHH
Confidence 35667776665544 678999999999998 455554 433 56754 8999999999854
No 377
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=73.06 E-value=2.4 Score=43.15 Aligned_cols=36 Identities=22% Similarity=0.347 Sum_probs=31.5
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCC-cEEEEeecCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGF-NTACITKLFP 81 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~~~ 81 (633)
....|+|||+|..|..+|..|+..|. ++.|+|....
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 35679999999999999999999997 7999998644
No 378
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=73.04 E-value=3 Score=41.92 Aligned_cols=31 Identities=19% Similarity=0.352 Sum_probs=28.8
Q ss_pred cEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
.|.|||+|..|...|..++..|. +|+++|..
T Consensus 16 kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~ 47 (328)
T 2hjr_A 16 KISIIGAGQIGSTIALLLGQKDLGDVYMFDII 47 (328)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 59999999999999999999998 99999874
No 379
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=72.43 E-value=3.1 Score=40.84 Aligned_cols=32 Identities=28% Similarity=0.365 Sum_probs=28.8
Q ss_pred ccEEEEC-CchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVG-AGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIG-gG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.++|+| +|.+|..+|..|++.|++|+++.+.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 3599999 9999999999999999999998874
No 380
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=72.32 E-value=2.6 Score=41.36 Aligned_cols=32 Identities=25% Similarity=0.242 Sum_probs=28.9
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
..++|+|+|.+|-++|..|++.|. +|.|+.|.
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 469999999999999999999998 89888874
No 381
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=72.05 E-value=3 Score=40.68 Aligned_cols=32 Identities=22% Similarity=0.257 Sum_probs=28.5
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
..++|+|+|.+|.++|..|++.|. +|.|+.|.
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 469999999999999999999996 88888774
No 382
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=72.05 E-value=3 Score=41.50 Aligned_cols=30 Identities=27% Similarity=0.362 Sum_probs=27.9
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|||+|.-|...|..|+ +|.+|.++.+.
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHh-cCCceEEEECC
Confidence 4999999999999999999 99999999874
No 383
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=71.51 E-value=3.1 Score=41.54 Aligned_cols=30 Identities=23% Similarity=0.317 Sum_probs=27.8
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEee
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITK 78 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk 78 (633)
..|.|||+|.-|...|..|++.|.+|.++ +
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~ 49 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-A 49 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-C
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-E
Confidence 35999999999999999999999999998 5
No 384
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=71.51 E-value=2.1 Score=45.32 Aligned_cols=31 Identities=23% Similarity=0.288 Sum_probs=29.4
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|+|+|--|...|-.|.+.|.+|+|+|+.
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 3999999999999999999999999999986
No 385
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=71.44 E-value=3.1 Score=41.29 Aligned_cols=31 Identities=29% Similarity=0.303 Sum_probs=28.3
Q ss_pred cEEEECCchHHHHHHHHHHhCCC--cEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGF--NTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~--~V~vlEk~ 79 (633)
.|.|||+|..|...|..++..|. +|.++|..
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 38999999999999999999998 89999874
No 386
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=71.24 E-value=3.3 Score=43.60 Aligned_cols=34 Identities=24% Similarity=0.464 Sum_probs=31.1
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
+..+.|||.|.-|+..|..++++|.+|+++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~ 41 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDA 41 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999863
No 387
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=71.21 E-value=3.4 Score=40.72 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=29.5
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||.|..|..+|..|...|.+|+++++.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 46999999999999999999999999999874
No 388
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=71.18 E-value=3 Score=43.97 Aligned_cols=31 Identities=42% Similarity=0.567 Sum_probs=29.2
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||.|.-|+..|..++++|.+|+++++.
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECC
Confidence 4999999999999999999999999999974
No 389
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=71.07 E-value=3.4 Score=40.85 Aligned_cols=32 Identities=22% Similarity=0.303 Sum_probs=29.4
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
..|+|||.|..|..+|..|...|.+|+++++.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 45999999999999999999999999999874
No 390
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=71.06 E-value=3.5 Score=40.48 Aligned_cols=32 Identities=19% Similarity=0.252 Sum_probs=28.7
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
..++|+|+|.+|...|..|++.|. +|.|+.+.
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 459999999999999999999996 89998874
No 391
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=71.04 E-value=2.2 Score=42.33 Aligned_cols=30 Identities=27% Similarity=0.403 Sum_probs=27.9
Q ss_pred cEEEECCchHHHHHHHHHHhC-----C-CcEEEEee
Q 046556 49 DAVVVGAGGAGLRAAIGLSEH-----G-FNTACITK 78 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~-----G-~~V~vlEk 78 (633)
.|.|||+|.-|...|..|++. | .+|+++++
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 499999999999999999998 9 89999986
No 392
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=71.03 E-value=2.7 Score=41.39 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=27.5
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.++|+|+|..|..+|..|++.| +|+++.+.
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 5999999999999999999999 99998763
No 393
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=70.95 E-value=3.9 Score=40.84 Aligned_cols=32 Identities=22% Similarity=0.292 Sum_probs=29.3
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
-.|.|||+|..|...|..++..|. +|+++|..
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 359999999999999999999999 99999874
No 394
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=70.77 E-value=4.4 Score=38.98 Aligned_cols=31 Identities=23% Similarity=0.170 Sum_probs=28.0
Q ss_pred cEEEECC-c-hHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGA-G-GAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGg-G-~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-|||.|+ | ..|...|..++++|++|+++++.
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCCCchHHHHHHHHHHCCCEEEEecCC
Confidence 4899998 7 69999999999999999999874
No 395
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=70.01 E-value=4.4 Score=37.79 Aligned_cols=31 Identities=19% Similarity=0.273 Sum_probs=28.7
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||+|..|...|..+++.|.+|.++++.
T Consensus 30 ~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 30 KVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5999999999999999999999999999874
No 396
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=69.75 E-value=4.1 Score=42.57 Aligned_cols=30 Identities=30% Similarity=0.449 Sum_probs=28.2
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC---cEEEEe
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF---NTACIT 77 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~---~V~vlE 77 (633)
..|+|+|+|.||..+|..|.+.|. +|.|++
T Consensus 187 ~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 187 ITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 469999999999999999999998 799999
No 397
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=69.65 E-value=3.3 Score=43.89 Aligned_cols=31 Identities=23% Similarity=0.343 Sum_probs=29.0
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||+|.-|...|..++++|++|+++++.
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~ 69 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESD 69 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECC
Confidence 4999999999999999999999999999874
No 398
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=69.58 E-value=3.7 Score=42.12 Aligned_cols=33 Identities=24% Similarity=0.213 Sum_probs=30.2
Q ss_pred cccEEEECC-chHHHHHHHHHHhCCC---cEEEEeec
Q 046556 47 TYDAVVVGA-GGAGLRAAIGLSEHGF---NTACITKL 79 (633)
Q Consensus 47 ~~DVlIIGg-G~AGl~AA~~aa~~G~---~V~vlEk~ 79 (633)
...|+|||+ |.+|+.|+-.|...|+ +|.++|..
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~ 250 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIK 250 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecc
Confidence 457999999 9999999999999998 89999875
No 399
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=69.12 E-value=4.2 Score=37.58 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=27.9
Q ss_pred EEEEC-CchHHHHHHHHHHhCCCcEEEEeec
Q 046556 50 AVVVG-AGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 50 VlIIG-gG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
|+||| +|..|...|..+++.|.+|.++++.
T Consensus 3 i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 3 VALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 89999 9999999999999999999999874
No 400
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=68.98 E-value=4 Score=40.78 Aligned_cols=32 Identities=22% Similarity=0.277 Sum_probs=28.9
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC--cEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF--NTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~--~V~vlEk~ 79 (633)
..|.|||+|..|.+.|+.++..|. .++++|..
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 469999999999999999999987 89999864
No 401
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=68.70 E-value=4.6 Score=42.25 Aligned_cols=36 Identities=31% Similarity=0.395 Sum_probs=31.7
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCC-cEEEEeecCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGF-NTACITKLFP 81 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~~~ 81 (633)
....|+|||+|..|+.+|..|+..|. ++.|+|....
T Consensus 39 ~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~V 75 (434)
T 1tt5_B 39 DTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTI 75 (434)
T ss_dssp HTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBC
T ss_pred cCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEe
Confidence 35679999999999999999999997 8999997644
No 402
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=68.63 E-value=6.1 Score=40.46 Aligned_cols=33 Identities=15% Similarity=0.225 Sum_probs=30.0
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
.-|+|||+|.-|...|..|.+.|++|++++...
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~ 45 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSE 45 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 359999999999999999999999999998753
No 403
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=68.46 E-value=3.8 Score=43.64 Aligned_cols=32 Identities=16% Similarity=0.221 Sum_probs=29.3
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||.|..|..+|..|...|++|+++|+.
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~ 306 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEID 306 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35999999999999999999999999999874
No 404
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=68.07 E-value=3.9 Score=43.08 Aligned_cols=31 Identities=23% Similarity=0.380 Sum_probs=29.3
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||+|.-|..-|..++++|++|+++|..
T Consensus 56 kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~ 86 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGLAGIETFLVVRN 86 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECc
Confidence 5999999999999999999999999999975
No 405
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=67.92 E-value=4 Score=41.64 Aligned_cols=31 Identities=16% Similarity=0.152 Sum_probs=28.2
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEee
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITK 78 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk 78 (633)
..|+|+|.|..|..+|..|.+.|++|++.|.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~ 204 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDV 204 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcC
Confidence 3599999999999999999999999998764
No 406
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=67.80 E-value=3.7 Score=40.05 Aligned_cols=32 Identities=19% Similarity=0.364 Sum_probs=28.8
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
..|+|||+|.+|-+++..|.+.|. +|.|+.|.
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 469999999999999999999997 79998874
No 407
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=67.66 E-value=4.2 Score=40.86 Aligned_cols=32 Identities=28% Similarity=0.232 Sum_probs=29.4
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
..|.|||+|.-|...|..|+++|.+|.++++.
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 46999999999999999999999999999874
No 408
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=67.63 E-value=3.3 Score=41.43 Aligned_cols=29 Identities=21% Similarity=0.364 Sum_probs=27.8
Q ss_pred EEEECCchHHHHHHHHHHhCCCcEEEEee
Q 046556 50 AVVVGAGGAGLRAAIGLSEHGFNTACITK 78 (633)
Q Consensus 50 VlIIGgG~AGl~AA~~aa~~G~~V~vlEk 78 (633)
|.|||+|..|...|..++++|.+|.++++
T Consensus 3 I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 89999999999999999999999999987
No 409
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=67.61 E-value=4.5 Score=41.13 Aligned_cols=32 Identities=22% Similarity=0.199 Sum_probs=28.5
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|+|+|+.|+.++..|...|++|++++..
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~ 222 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKATGAEVIVTSSS 222 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEecC
Confidence 35999999999999999999999999998863
No 410
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=67.56 E-value=4.6 Score=40.44 Aligned_cols=31 Identities=19% Similarity=0.251 Sum_probs=28.4
Q ss_pred cEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
.|.|||+|..|...|..++..|. +|+|+|..
T Consensus 6 kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~ 37 (322)
T 1t2d_A 6 KIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 37 (322)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 59999999999999999999998 89898864
No 411
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=67.41 E-value=3.3 Score=43.47 Aligned_cols=31 Identities=23% Similarity=0.214 Sum_probs=28.7
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||.|..|+..|..+++.|.+|+++++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 3899999999999999999999999999874
No 412
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=67.29 E-value=4.5 Score=39.98 Aligned_cols=31 Identities=26% Similarity=0.250 Sum_probs=29.0
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||.|.-|...|..+++.|.+|+++++.
T Consensus 9 ~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 9 HVGIVGLGSMGMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 5999999999999999999999999999874
No 413
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=67.07 E-value=4.4 Score=40.91 Aligned_cols=32 Identities=22% Similarity=0.195 Sum_probs=28.4
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|+|+|..|+.++..|...|++|++++..
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~ 209 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMGAEVSVFARN 209 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 35999999999999999999999999988764
No 414
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=67.06 E-value=5 Score=38.28 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=29.6
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
..|.|||.|.-|...|..|++.|.+|++.++.
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45999999999999999999999999999875
No 415
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=67.02 E-value=3.3 Score=37.90 Aligned_cols=31 Identities=16% Similarity=0.161 Sum_probs=27.3
Q ss_pred cEEEEC-CchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVG-AGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIG-gG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-|+|+| +|..|..++..++..|++|+++++.
T Consensus 41 ~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~ 72 (198)
T 1pqw_A 41 RVLIHSATGGVGMAAVSIAKMIGARIYTTAGS 72 (198)
T ss_dssp EEEETTTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred EEEEeeCCChHHHHHHHHHHHcCCEEEEEeCC
Confidence 489999 6999999999999999999998863
No 416
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=67.00 E-value=4.4 Score=42.11 Aligned_cols=32 Identities=22% Similarity=0.158 Sum_probs=29.5
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||.|..|..+|..|...|++|++.|..
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~d 252 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEID 252 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999874
No 417
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=66.96 E-value=4.6 Score=41.15 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=29.8
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
..|.|||.|.-|...|..+++.|.+|+++++.
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46999999999999999999999999999874
No 418
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=66.85 E-value=5.8 Score=39.34 Aligned_cols=32 Identities=16% Similarity=0.148 Sum_probs=29.2
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
..|.|||.|..|...|..+++.|.+|.++++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCC
Confidence 35999999999999999999999999999874
No 419
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=66.69 E-value=4.6 Score=41.51 Aligned_cols=31 Identities=23% Similarity=0.407 Sum_probs=29.2
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-|+|||+|..|...|..|.+.|++|++++..
T Consensus 16 ~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~ 46 (389)
T 3q2o_A 16 TIGIIGGGQLGRMMALAAKEMGYKIAVLDPT 46 (389)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 5999999999999999999999999999865
No 420
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=66.58 E-value=4.4 Score=42.35 Aligned_cols=30 Identities=13% Similarity=0.345 Sum_probs=27.9
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||.|.-|+..|..+++ |.+|+++++.
T Consensus 38 kIaVIGlG~mG~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 38 KITISGTGYVGLSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp EEEEECCSHHHHHHHHHHHT-TSEEEEECSC
T ss_pred EEEEECcCHHHHHHHHHHHc-CCeEEEEecC
Confidence 59999999999999999998 9999999874
No 421
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=66.47 E-value=2.8 Score=39.63 Aligned_cols=31 Identities=13% Similarity=0.041 Sum_probs=28.6
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|+|+|..|...|..|.+.|. |+++|+.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~ 40 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDE 40 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECC
Confidence 359999999999999999999999 9999986
No 422
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=66.43 E-value=3.8 Score=40.01 Aligned_cols=32 Identities=25% Similarity=0.334 Sum_probs=28.7
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
..|+|||+|..|.+.|..|.+.|.+|.++++.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 45999999999999999999999988888874
No 423
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=66.33 E-value=3.5 Score=44.45 Aligned_cols=31 Identities=39% Similarity=0.580 Sum_probs=27.6
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.++|+|+|.+|.++|..|++.|.+|+++.+.
T Consensus 366 ~vlV~GaGGig~aia~~L~~~G~~V~i~~R~ 396 (523)
T 2o7s_A 366 TVVVIGAGGAGKALAYGAKEKGAKVVIANRT 396 (523)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCC-CEEEESS
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 5999999999999999999999999998874
No 424
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=65.98 E-value=4.7 Score=40.84 Aligned_cols=36 Identities=19% Similarity=0.204 Sum_probs=31.6
Q ss_pred ccccEEEECCchHHHHHHHHHHhCCC-cEEEEeecCC
Q 046556 46 HTYDAVVVGAGGAGLRAAIGLSEHGF-NTACITKLFP 81 (633)
Q Consensus 46 ~~~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~~~ 81 (633)
....|+|||.|..|..+|..|+..|. +++|+|....
T Consensus 35 ~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V 71 (346)
T 1y8q_A 35 RASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQV 71 (346)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCc
Confidence 35679999999999999999999998 8999987644
No 425
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=65.91 E-value=5 Score=40.87 Aligned_cols=32 Identities=25% Similarity=0.247 Sum_probs=28.5
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|+|+|..|+.++..|+..|++|++++..
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~ 220 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFGSKVTVISTS 220 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35999999999999999999999999988864
No 426
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=65.42 E-value=4 Score=43.27 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=29.9
Q ss_pred cEEEECCchHHHHHHHHHHhC-CC-cEEEEeecC
Q 046556 49 DAVVVGAGGAGLRAAIGLSEH-GF-NTACITKLF 80 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~-G~-~V~vlEk~~ 80 (633)
.|.|||.|.-|+..|..++++ |+ +|+++++..
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCC
T ss_pred EEEEECcCHHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 499999999999999999999 99 999999863
No 427
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=65.00 E-value=7.2 Score=38.59 Aligned_cols=32 Identities=28% Similarity=0.367 Sum_probs=29.5
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
..|.|||.|.-|...|..+++.|++|+++++.
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35999999999999999999999999999874
No 428
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=64.96 E-value=5 Score=40.65 Aligned_cols=31 Identities=23% Similarity=0.194 Sum_probs=28.1
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEee
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITK 78 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk 78 (633)
--|+|+|.|..|..+|..|.+.|++|++.|.
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~GakVvvsD~ 206 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAGAQLLVADT 206 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeC
Confidence 4599999999999999999999999997764
No 429
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=64.91 E-value=5.1 Score=39.16 Aligned_cols=31 Identities=19% Similarity=0.192 Sum_probs=29.0
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||.|.-|...|..+++.|++|+++++.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCC
Confidence 4899999999999999999999999999875
No 430
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=64.45 E-value=5.5 Score=40.62 Aligned_cols=31 Identities=26% Similarity=0.249 Sum_probs=27.7
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|+|+|+.|+.++..|...|++|++++..
T Consensus 197 ~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~ 227 (369)
T 1uuf_A 197 KVGVVGIGGLGHMGIKLAHAMGAHVVAFTTS 227 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5999999999999999998899998888864
No 431
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=64.44 E-value=4 Score=42.30 Aligned_cols=32 Identities=28% Similarity=0.401 Sum_probs=28.6
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
-.|+|||+|..|..+|..|...|. +|+++++.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~ 200 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRT 200 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 359999999999999999999998 89888874
No 432
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=64.34 E-value=5.4 Score=39.63 Aligned_cols=31 Identities=26% Similarity=0.412 Sum_probs=27.8
Q ss_pred cEEEECCchHHHHHHHHHHhC--CCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEH--GFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~--G~~V~vlEk~ 79 (633)
.|.|||+|..|...|..+++. |.+|+++|..
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 389999999999999999985 6899999985
No 433
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=64.24 E-value=4.7 Score=40.95 Aligned_cols=31 Identities=26% Similarity=0.347 Sum_probs=27.9
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|+|+|..|+.++..|...|++|+++++.
T Consensus 182 ~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~ 212 (360)
T 1piw_A 182 KVGIVGLGGIGSMGTLISKAMGAETYVISRS 212 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 5999999999999999988899999988864
No 434
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=64.16 E-value=6.2 Score=37.06 Aligned_cols=31 Identities=23% Similarity=0.328 Sum_probs=28.8
Q ss_pred cEEEECC-chHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGA-GGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGg-G~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-|+|.|+ |..|...+..|.++|++|+++.+.
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred eEEEECCCChHHHHHHHHHHhCCCeEEEEECC
Confidence 4999997 999999999999999999999985
No 435
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=64.12 E-value=6 Score=38.18 Aligned_cols=31 Identities=39% Similarity=0.578 Sum_probs=28.4
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|||.|..|...|..+.+.|.+|.++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 6999999999999999999999999888874
No 436
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=64.06 E-value=6.3 Score=36.49 Aligned_cols=30 Identities=23% Similarity=0.348 Sum_probs=28.1
Q ss_pred EEEECC-chHHHHHHHHHHhCCCcEEEEeec
Q 046556 50 AVVVGA-GGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 50 VlIIGg-G~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
|+|+|+ |..|...+..|.++|.+|+++.+.
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 899997 999999999999999999999875
No 437
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=64.02 E-value=6.5 Score=36.19 Aligned_cols=30 Identities=27% Similarity=0.395 Sum_probs=28.0
Q ss_pred EEEECC-chHHHHHHHHHHhCCCcEEEEeec
Q 046556 50 AVVVGA-GGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 50 VlIIGg-G~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
|+|+|+ |..|...+..|.++|++|+++.+.
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 899995 999999999999999999999985
No 438
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=64.00 E-value=6.1 Score=39.17 Aligned_cols=31 Identities=19% Similarity=0.376 Sum_probs=29.2
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||.|.-|...|..+++.|++|+++++.
T Consensus 23 ~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 23 EVGFLGLGIMGKAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 5999999999999999999999999999875
No 439
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=63.89 E-value=4.7 Score=40.49 Aligned_cols=31 Identities=26% Similarity=0.256 Sum_probs=27.9
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|+|+|+.|+.++..|...|++|++++..
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~ 199 (340)
T 3s2e_A 169 WVVISGIGGLGHVAVQYARAMGLRVAAVDID 199 (340)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 5999999999999999999999999998763
No 440
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=63.69 E-value=5.9 Score=40.04 Aligned_cols=31 Identities=26% Similarity=0.483 Sum_probs=27.4
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|+|+|..|+.++..|...|++|+++++.
T Consensus 171 ~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~ 201 (352)
T 1e3j_A 171 TVLVIGAGPIGLVSVLAAKAYGAFVVCTARS 201 (352)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEcCC
Confidence 5999999999999999998899998888753
No 441
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=63.60 E-value=5.8 Score=39.99 Aligned_cols=31 Identities=19% Similarity=0.206 Sum_probs=28.0
Q ss_pred cEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
.|+|+|+|..|+.++..|...|+ +|+++++.
T Consensus 170 ~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~ 201 (348)
T 2d8a_A 170 SVLITGAGPLGLLGIAVAKASGAYPVIVSEPS 201 (348)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCSEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 59999999999999999999999 89988763
No 442
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=63.55 E-value=5.7 Score=38.59 Aligned_cols=32 Identities=31% Similarity=0.471 Sum_probs=27.7
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
..++|+|+|.|+-++++.|++.|. +|.|+.|.
T Consensus 126 ~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt 158 (269)
T 3tum_A 126 KRALVIGCGGVGSAIAYALAEAGIASITLCDPS 158 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCC
Confidence 459999999999999999999996 67777663
No 443
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=63.40 E-value=6 Score=39.77 Aligned_cols=31 Identities=26% Similarity=0.216 Sum_probs=26.8
Q ss_pred cEEEECCchHHHHHHHHHHhC-CCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEH-GFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~-G~~V~vlEk~ 79 (633)
.|+|+|+|..|+.++..|+.. |.+|+.++..
T Consensus 166 ~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~ 197 (348)
T 4eez_A 166 WQVIFGAGGLGNLAIQYAKNVFGAKVIAVDIN 197 (348)
T ss_dssp EEEEECCSHHHHHHHHHHHHTSCCEEEEEESC
T ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEEECc
Confidence 599999999999999999876 6799988863
No 444
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=63.29 E-value=5.7 Score=42.20 Aligned_cols=31 Identities=23% Similarity=0.269 Sum_probs=29.0
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||+|.-|...|..++++|++|+++++.
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~ 37 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGHQVLLYDIS 37 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEECC
Confidence 4999999999999999999999999999874
No 445
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=62.87 E-value=6.2 Score=38.91 Aligned_cols=31 Identities=26% Similarity=0.308 Sum_probs=28.7
Q ss_pred cEEEEC-CchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVG-AGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIG-gG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.||| .|.-|.+.|..+++.|.+|.++++.
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~ 54 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRE 54 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTT
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 499999 9999999999999999999999864
No 446
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=62.85 E-value=6 Score=38.96 Aligned_cols=32 Identities=22% Similarity=0.241 Sum_probs=29.1
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.-.|.|||.|.-|..-|..++ +|++|+++++.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~ 43 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVS 43 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECC
Confidence 456999999999999999999 99999999974
No 447
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=62.83 E-value=6.2 Score=39.94 Aligned_cols=31 Identities=19% Similarity=0.251 Sum_probs=27.3
Q ss_pred cEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
.|+|+|+|..|+.++..|...|+ +|++++..
T Consensus 174 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~ 205 (356)
T 1pl8_A 174 KVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLS 205 (356)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 59999999999999998888999 88888753
No 448
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=62.60 E-value=5 Score=40.85 Aligned_cols=31 Identities=19% Similarity=0.305 Sum_probs=28.1
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|+|+|..|+.++..|+..|++|+++++.
T Consensus 183 ~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~ 213 (366)
T 2cdc_A 183 KVLVVGTGPIGVLFTLLFRTYGLEVWMANRR 213 (366)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 5999999999999999999899999998864
No 449
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=62.56 E-value=7.5 Score=39.76 Aligned_cols=32 Identities=19% Similarity=0.379 Sum_probs=29.0
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
..|+|+|+|..|...+..+.+.|.+|++++..
T Consensus 12 ~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~ 43 (391)
T 1kjq_A 12 TRVMLLGSGELGKEVAIECQRLGVEVIAVDRY 43 (391)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 35999999999999999999999999999865
No 450
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=62.53 E-value=4.8 Score=40.21 Aligned_cols=31 Identities=29% Similarity=0.368 Sum_probs=28.1
Q ss_pred cEEEECCchHHHHHHHHHHhCCC--cEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGF--NTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~--~V~vlEk~ 79 (633)
.|.|||+|..|...|..+++.|. +|+++++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 38999999999999999999998 89999874
No 451
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=62.42 E-value=6.9 Score=40.71 Aligned_cols=32 Identities=19% Similarity=0.184 Sum_probs=29.3
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
..|+|+|+|..|...+..|.+.|++|++++..
T Consensus 36 ~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~ 67 (419)
T 4e4t_A 36 AWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPD 67 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 46999999999999999999999999999854
No 452
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=62.42 E-value=4.8 Score=40.47 Aligned_cols=31 Identities=23% Similarity=0.231 Sum_probs=28.0
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|+|+|..|+.++..|...|++|+++++.
T Consensus 167 ~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~ 197 (339)
T 1rjw_A 167 WVAIYGIGGLGHVAVQYAKAMGLNVVAVDIG 197 (339)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 5999999999999999999999999988863
No 453
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=62.39 E-value=6.1 Score=38.30 Aligned_cols=30 Identities=27% Similarity=0.257 Sum_probs=27.7
Q ss_pred EEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 50 AVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 50 VlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
|.|||+|..|...|..+.+.|.+|.++++.
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 899999999999999999999999998764
No 454
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=62.36 E-value=6.8 Score=39.48 Aligned_cols=31 Identities=26% Similarity=0.237 Sum_probs=28.2
Q ss_pred cEEEECC-chHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGA-GGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGg-G~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|+|+ |..|+.++..|+..|++|+++++.
T Consensus 172 ~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~ 203 (347)
T 2hcy_A 172 WVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG 203 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred EEEEECCCchHHHHHHHHHHHCCCcEEEEcCC
Confidence 5999998 899999999999999999999864
No 455
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=62.35 E-value=5.2 Score=40.89 Aligned_cols=32 Identities=25% Similarity=0.295 Sum_probs=28.0
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
-.|+|+|+|+.|+.++..|...|+ +|++++..
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~ 227 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAGASRIIGIDID 227 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCSCEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 359999999999999999988998 79888764
No 456
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=62.27 E-value=4 Score=41.61 Aligned_cols=31 Identities=29% Similarity=0.272 Sum_probs=28.7
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||+|.-|...|..|+++|.+|.++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 4999999999999999999999999999874
No 457
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=62.24 E-value=4.3 Score=42.00 Aligned_cols=29 Identities=17% Similarity=0.241 Sum_probs=27.0
Q ss_pred cEEEECCchHHHHHHHHHHh-CCCcEEEEe
Q 046556 49 DAVVVGAGGAGLRAAIGLSE-HGFNTACIT 77 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~-~G~~V~vlE 77 (633)
.|.|||+|..|...|..|++ .|.+|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 49999999999999999998 599999998
No 458
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=61.96 E-value=6.5 Score=39.52 Aligned_cols=31 Identities=26% Similarity=0.315 Sum_probs=27.9
Q ss_pred cEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
.|+|+|+|..|+.++..|...|+ +|+++++.
T Consensus 167 ~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~ 198 (343)
T 2dq4_A 167 SVLITGAGPIGLMAAMVVRASGAGPILVSDPN 198 (343)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCSEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 59999999999999999998999 89998763
No 459
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=61.96 E-value=6.8 Score=39.17 Aligned_cols=31 Identities=16% Similarity=0.100 Sum_probs=27.9
Q ss_pred cEEEECC-chHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGA-GGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGg-G~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-|+|+|+ |..|+.++..|+..|++|+++++.
T Consensus 148 ~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~ 179 (333)
T 1v3u_A 148 TVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS 179 (333)
T ss_dssp EEEEESTTBHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEecCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 4999997 999999999999999999998863
No 460
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=61.93 E-value=7.5 Score=35.26 Aligned_cols=31 Identities=19% Similarity=0.427 Sum_probs=28.6
Q ss_pred cEEEECC-chHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGA-GGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGg-G~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-|+|+|+ |..|...+..|.++|.+|+++.+.
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC
Confidence 3999997 999999999999999999999985
No 461
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=61.60 E-value=6.3 Score=39.19 Aligned_cols=31 Identities=35% Similarity=0.573 Sum_probs=28.0
Q ss_pred cEEEECC-chHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGA-GGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGg-G~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
+|+|+|+ |+.|+.++..|+..|++|++++..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~ 180 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGR 180 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCC
Confidence 4999998 999999999999999999998863
No 462
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=61.60 E-value=5.8 Score=39.77 Aligned_cols=31 Identities=26% Similarity=0.373 Sum_probs=27.7
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC--cEEEEee
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF--NTACITK 78 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~--~V~vlEk 78 (633)
..|.|||+|..|.+.|..++..|. +++++|.
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~ 38 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQGITDELVVIDV 38 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEec
Confidence 359999999999999999999887 7888886
No 463
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=61.58 E-value=5.3 Score=41.39 Aligned_cols=30 Identities=27% Similarity=0.299 Sum_probs=27.6
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||.|..|+..|..+++ |.+|+++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECC
Confidence 38899999999999999999 9999999874
No 464
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=61.52 E-value=6.4 Score=39.12 Aligned_cols=31 Identities=19% Similarity=0.282 Sum_probs=28.0
Q ss_pred cEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
.|.|||+|..|...|..++..|. +|+++|..
T Consensus 4 kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 49999999999999999999996 88888864
No 465
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=61.45 E-value=6.6 Score=39.66 Aligned_cols=31 Identities=23% Similarity=0.357 Sum_probs=27.3
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC-cEEEEee
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF-NTACITK 78 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk 78 (633)
-.|+|+|+|+.|+.++..|...|+ +|++++.
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~ 199 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHLGAGRIFAVGS 199 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCSSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCcEEEEECC
Confidence 359999999999999998888998 7888875
No 466
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=61.30 E-value=5.8 Score=40.23 Aligned_cols=31 Identities=19% Similarity=0.291 Sum_probs=27.9
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|+|+|+.|+.++..|...|++|++++..
T Consensus 183 ~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~ 213 (357)
T 2cf5_A 183 RGGILGLGGVGHMGVKIAKAMGHHVTVISSS 213 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 5999999999999999888889999988864
No 467
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=61.27 E-value=7.8 Score=37.54 Aligned_cols=32 Identities=22% Similarity=0.415 Sum_probs=29.7
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeecC
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKLF 80 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~ 80 (633)
.|+|+|+|..|...+..|.++|.+|+++.+..
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 49999999999999999999999999999864
No 468
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=61.26 E-value=5.8 Score=42.27 Aligned_cols=47 Identities=11% Similarity=0.128 Sum_probs=36.3
Q ss_pred HHHHhCCCEEEEEEEEEEEEEccCCcEEEEEEEEcCCCeEEEEEcCeEEEccCC
Q 046556 192 GQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGG 245 (633)
Q Consensus 192 ~~a~~~gv~i~~~~~v~~L~~d~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 245 (633)
+.+++.|++++.++.|+++.. + +++.++.. .+|+ .+.||.||+|+|-
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~-~-~~v~~v~~---~~g~--~i~aD~Vv~a~G~ 311 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEG-N-EKVERVID---MNNH--EYKVDALIFADGR 311 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEEC-S-SSCCEEEE---TTCC--EEECSEEEECCCE
T ss_pred HHHHhCCcEEEeCCeeEEEec-C-CceEEEEe---CCCe--EEEeCEEEECCCc
Confidence 566778999999999999975 3 45555553 4564 4899999999994
No 469
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=61.04 E-value=7.2 Score=42.33 Aligned_cols=34 Identities=21% Similarity=0.129 Sum_probs=31.2
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeecCC
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFP 81 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~~~ 81 (633)
-.++|||+|-.|...|..|.+.|.+|+++|+...
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 4699999999999999999999999999998743
No 470
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=60.66 E-value=6.3 Score=40.04 Aligned_cols=30 Identities=17% Similarity=0.189 Sum_probs=28.0
Q ss_pred EEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 50 AVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 50 VlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
|+|||+|..|...|..|.+.|++|++++..
T Consensus 2 iliiG~g~~g~~~~~a~~~~G~~v~~~~~~ 31 (369)
T 3aw8_A 2 IGILGGGQLGRMLALAGYPLGLSFRFLDPS 31 (369)
T ss_dssp EEEECCSHHHHHHHHHHTTBTCCEEEEESC
T ss_pred EEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 899999999999999999999999999864
No 471
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=60.30 E-value=5.9 Score=38.91 Aligned_cols=31 Identities=23% Similarity=0.343 Sum_probs=28.5
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||.|..|...|..+++.|.+|.++++.
T Consensus 6 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 6 KIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp EEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 5999999999999999999999999998874
No 472
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=60.21 E-value=7.1 Score=37.90 Aligned_cols=31 Identities=26% Similarity=0.283 Sum_probs=27.7
Q ss_pred cEEEECCchHHHHHHHHHHhCCC--cEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGF--NTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~--~V~vlEk~ 79 (633)
.|.|||.|.-|.+.|..+++.|. +|+++++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 38999999999999999999998 88888764
No 473
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=60.15 E-value=9.8 Score=37.32 Aligned_cols=31 Identities=16% Similarity=0.199 Sum_probs=27.5
Q ss_pred cEEEECCc---hHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAG---GAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG---~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-+||.|++ ..|...|..++++|++|+++.+.
T Consensus 32 ~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 32 KGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 48999975 78999999999999999999875
No 474
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=60.01 E-value=6.6 Score=40.60 Aligned_cols=30 Identities=13% Similarity=0.161 Sum_probs=28.6
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEe
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACIT 77 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlE 77 (633)
..|+|+|||..|...+..|.+.|++|++++
T Consensus 25 ~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 25 RKVGVLGGGQLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 459999999999999999999999999999
No 475
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=60.01 E-value=6.4 Score=39.43 Aligned_cols=32 Identities=25% Similarity=0.187 Sum_probs=28.3
Q ss_pred ccEEEECC-chHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGA-GGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGg-G~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|+|+ |..|+.++..|+..|++|+++++.
T Consensus 151 ~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~ 183 (336)
T 4b7c_A 151 ETVVISGAAGAVGSVAGQIARLKGCRVVGIAGG 183 (336)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35999998 999999999999999999998864
No 476
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=59.96 E-value=7.9 Score=38.71 Aligned_cols=32 Identities=13% Similarity=0.071 Sum_probs=29.0
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
..|.|||+|..|.+.|..++..|. +|.|+|..
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~ 40 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFDIA 40 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 359999999999999999999998 89999874
No 477
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=59.82 E-value=6 Score=43.36 Aligned_cols=35 Identities=31% Similarity=0.301 Sum_probs=31.1
Q ss_pred cccEEEECCchHHHHHHHHHHhCCC-cEEEEeecCC
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGF-NTACITKLFP 81 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~~~ 81 (633)
...|+|||+|..|+.+|..|++.|. +++|+|....
T Consensus 17 ~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~V 52 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTI 52 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBC
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEE
Confidence 4569999999999999999999997 8999997644
No 478
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=59.82 E-value=6.4 Score=39.60 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=28.5
Q ss_pred ccEEEECC-chHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGA-GGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGg-G~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|+|+ |..|+.++..|+..|++|++++..
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~ 193 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR 193 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 35999998 999999999999999999998864
No 479
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=59.80 E-value=5.8 Score=39.60 Aligned_cols=32 Identities=25% Similarity=0.399 Sum_probs=29.5
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
..|.|||.|.-|...|..+++.|.+|+++++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCC
Confidence 35999999999999999999999999999874
No 480
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=59.71 E-value=6.9 Score=39.91 Aligned_cols=31 Identities=32% Similarity=0.372 Sum_probs=27.2
Q ss_pred cEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
.|+|+|+|+.|+.++..|...|+ +|++++..
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~ 229 (376)
T 1e3i_A 198 TCAVFGLGCVGLSAIIGCKIAGASRIIAIDIN 229 (376)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 59999999999999999988999 78888753
No 481
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=59.60 E-value=7.2 Score=40.65 Aligned_cols=32 Identities=28% Similarity=0.233 Sum_probs=29.3
Q ss_pred ccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-.|+|||.|..|..+|..|...|++|++.|..
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~d 279 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTEVD 279 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45999999999999999999999999999864
No 482
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=59.59 E-value=7.7 Score=36.53 Aligned_cols=31 Identities=16% Similarity=0.329 Sum_probs=27.3
Q ss_pred cEEEECC-----------------chHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGA-----------------GGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGg-----------------G~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
-|||-|| |--|.+.|..++++|++|+++.+.
T Consensus 10 ~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 10 NIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp EEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred EEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence 3888888 789999999999999999999763
No 483
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=59.53 E-value=6.3 Score=39.99 Aligned_cols=31 Identities=23% Similarity=0.188 Sum_probs=27.6
Q ss_pred cEEEECCchHHHHHHHHHHhC-CCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEH-GFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~-G~~V~vlEk~ 79 (633)
.|+|+|+|+.|+.++..|... |++|++++..
T Consensus 189 ~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~ 220 (359)
T 1h2b_A 189 YVAIVGVGGLGHIAVQLLKVMTPATVIALDVK 220 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 599999999999999888888 9999988863
No 484
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=59.51 E-value=5.8 Score=39.37 Aligned_cols=31 Identities=26% Similarity=0.351 Sum_probs=27.9
Q ss_pred cEEEECCchHHHHHHHHHHhCC--CcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHG--FNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G--~~V~vlEk~ 79 (633)
.|.|||+|..|...|..+++.| .+|+++++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 4899999999999999999998 689999874
No 485
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=59.49 E-value=6.3 Score=36.87 Aligned_cols=31 Identities=16% Similarity=0.199 Sum_probs=27.8
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEE-Eeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTAC-ITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~v-lEk~ 79 (633)
.|.|||+|.-|...|..+++.|.+|++ .++.
T Consensus 25 kI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 25 TYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp CEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 599999999999999999999999988 6653
No 486
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=59.32 E-value=6 Score=38.96 Aligned_cols=31 Identities=19% Similarity=0.318 Sum_probs=28.8
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||.|.-|...|..+++.|++|+++++.
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEcCC
Confidence 4999999999999999999999999999874
No 487
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=59.12 E-value=7.6 Score=37.23 Aligned_cols=30 Identities=17% Similarity=0.179 Sum_probs=26.1
Q ss_pred EEEECCc---hHHHHHHHHHHhCCCcEEEEeec
Q 046556 50 AVVVGAG---GAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 50 VlIIGgG---~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
+||.|++ ..|...|..++++|++|++..+.
T Consensus 9 alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~ 41 (256)
T 4fs3_A 9 YVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRK 41 (256)
T ss_dssp EEEECCCSTTCHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEECCCCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 7888853 57999999999999999999875
No 488
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=59.01 E-value=8.8 Score=36.23 Aligned_cols=30 Identities=20% Similarity=0.264 Sum_probs=27.6
Q ss_pred EEEECC-chHHHHHHHHHHhCCCcEEEEeec
Q 046556 50 AVVVGA-GGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 50 VlIIGg-G~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
|+|.|+ |..|...|..|+++|++|+++.+.
T Consensus 4 vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARAGHTVIGIDRG 34 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 889986 899999999999999999999985
No 489
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=59.00 E-value=6 Score=39.32 Aligned_cols=31 Identities=26% Similarity=0.293 Sum_probs=28.9
Q ss_pred cEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
.|.|||.|.-|...|..+++.|. +|+++++.
T Consensus 26 ~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 26 KLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred EEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 59999999999999999999999 99999874
No 490
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=58.88 E-value=7.3 Score=39.69 Aligned_cols=31 Identities=19% Similarity=0.179 Sum_probs=26.8
Q ss_pred ccEEEECCchHHHHHHHHHHhCCC-cEEEEee
Q 046556 48 YDAVVVGAGGAGLRAAIGLSEHGF-NTACITK 78 (633)
Q Consensus 48 ~DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk 78 (633)
-.|+|+|+|+.|+.++..|...|+ +|++++.
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 215 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLAGATTVILSTR 215 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 359999999999999999988999 7777765
No 491
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=58.84 E-value=5.9 Score=39.49 Aligned_cols=33 Identities=15% Similarity=0.105 Sum_probs=28.9
Q ss_pred cccEEEECCc-hHHHHHHHHHHhCCCcEEEEeec
Q 046556 47 TYDAVVVGAG-GAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 47 ~~DVlIIGgG-~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
...|+|||+| ..|..+|..|...|++|+++++.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 3579999999 67999999999999999999764
No 492
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=58.83 E-value=6.4 Score=40.57 Aligned_cols=31 Identities=26% Similarity=0.207 Sum_probs=27.4
Q ss_pred cEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
.|+|+|+|+.|+.++..|...|+ +|++++..
T Consensus 188 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~ 219 (398)
T 2dph_A 188 HVYIAGAGPVGRCAAAGARLLGAACVIVGDQN 219 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 59999999999999988888898 89888863
No 493
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=58.80 E-value=7.7 Score=38.60 Aligned_cols=31 Identities=26% Similarity=0.283 Sum_probs=28.5
Q ss_pred cEEEECCchHHHHHHHHHHhCCC--cEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGF--NTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~--~V~vlEk~ 79 (633)
.|.|||.|..|.+.|..+++.|. +|+++++.
T Consensus 35 kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 35 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 59999999999999999999998 89888874
No 494
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=58.80 E-value=5.4 Score=39.02 Aligned_cols=31 Identities=23% Similarity=0.251 Sum_probs=28.9
Q ss_pred cEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|.|||.|.-|...|..+++.|++|+++++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRN 33 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSS
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCC
Confidence 4899999999999999999999999999875
No 495
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=58.75 E-value=6 Score=39.80 Aligned_cols=30 Identities=20% Similarity=0.257 Sum_probs=27.1
Q ss_pred cEEEECCchHHHHHHHHHHhC--CCcEEEEee
Q 046556 49 DAVVVGAGGAGLRAAIGLSEH--GFNTACITK 78 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~--G~~V~vlEk 78 (633)
.|+|+|+|..|+.++..|... |++|++++.
T Consensus 173 ~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~ 204 (344)
T 2h6e_A 173 VVIVNGIGGLAVYTIQILKALMKNITIVGISR 204 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHHhcCCCEEEEEeC
Confidence 599999999999999988888 999888875
No 496
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=58.72 E-value=7.2 Score=38.85 Aligned_cols=31 Identities=23% Similarity=0.180 Sum_probs=29.2
Q ss_pred cEEEECCchHHHHHHHHHHhCC-CcEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHG-FNTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G-~~V~vlEk~ 79 (633)
.|.|||.|.-|...|..+++.| .+|+++++.
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCSEEEEECGG
T ss_pred eEEEECccHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4999999999999999999999 999999985
No 497
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=58.71 E-value=8.7 Score=40.96 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=30.4
Q ss_pred cccEEEECCchHHHHHHHHHHhCCCcEEEEeec
Q 046556 47 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 47 ~~DVlIIGgG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
+..|.|||.|.-|...|..++++|.+|.+.++.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~ 42 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRT 42 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 457999999999999999999999999999875
No 498
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=58.67 E-value=6.9 Score=39.17 Aligned_cols=31 Identities=26% Similarity=0.329 Sum_probs=27.9
Q ss_pred cEEEEC-CchHHHHHHHHHHhCCCcEEEEeec
Q 046556 49 DAVVVG-AGGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 49 DVlIIG-gG~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
.|+|+| +|..|+.++..|+..|++|+++++.
T Consensus 151 ~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~ 182 (334)
T 3qwb_A 151 YVLLFAAAGGVGLILNQLLKMKGAHTIAVAST 182 (334)
T ss_dssp EEEESSTTBHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 599999 7999999999999999999998863
No 499
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=58.49 E-value=7.5 Score=39.62 Aligned_cols=31 Identities=26% Similarity=0.416 Sum_probs=27.3
Q ss_pred cEEEECCchHHHHHHHHHHhCCC-cEEEEeec
Q 046556 49 DAVVVGAGGAGLRAAIGLSEHGF-NTACITKL 79 (633)
Q Consensus 49 DVlIIGgG~AGl~AA~~aa~~G~-~V~vlEk~ 79 (633)
.|+|+|+|..|+.++..|+..|+ +|++++..
T Consensus 194 ~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~ 225 (374)
T 2jhf_A 194 TCAVFGLGGVGLSVIMGCKAAGAARIIGVDIN 225 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 59999999999999999999998 78888753
No 500
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=58.48 E-value=7.6 Score=37.56 Aligned_cols=30 Identities=17% Similarity=0.101 Sum_probs=27.5
Q ss_pred EEEECC---chHHHHHHHHHHhCCCcEEEEeec
Q 046556 50 AVVVGA---GGAGLRAAIGLSEHGFNTACITKL 79 (633)
Q Consensus 50 VlIIGg---G~AGl~AA~~aa~~G~~V~vlEk~ 79 (633)
+||.|+ |..|...|..++++|++|+++.+.
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~ 41 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN 41 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHTTTCEEEEEESS
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 899997 688999999999999999999875
Done!