Query 046560
Match_columns 333
No_of_seqs 194 out of 1294
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 13:20:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046560.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046560hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 6.1E-79 1.3E-83 575.4 31.0 310 24-333 24-350 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 6.4E-73 1.4E-77 530.0 28.8 299 28-328 1-314 (315)
3 PRK15381 pathogenicity island 100.0 1.6E-59 3.5E-64 445.7 23.2 257 24-331 139-403 (408)
4 cd01847 Triacylglycerol_lipase 100.0 1.9E-59 4.1E-64 432.2 22.7 260 27-329 1-281 (281)
5 cd01846 fatty_acyltransferase_ 100.0 1.4E-54 3.1E-59 397.3 23.4 256 29-327 1-269 (270)
6 COG3240 Phospholipase/lecithin 100.0 1E-39 2.2E-44 299.0 16.3 290 20-330 22-334 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.9 2.7E-25 5.9E-30 197.3 11.5 215 30-325 1-234 (234)
8 cd01832 SGNH_hydrolase_like_1 99.0 8.5E-09 1.8E-13 88.6 13.6 179 29-327 1-184 (185)
9 cd04501 SGNH_hydrolase_like_4 99.0 3.9E-08 8.5E-13 84.4 16.7 113 165-328 70-182 (183)
10 cd01839 SGNH_arylesterase_like 98.9 2E-08 4.4E-13 88.2 14.1 195 29-330 1-206 (208)
11 cd01836 FeeA_FeeB_like SGNH_hy 98.9 3.9E-08 8.4E-13 85.0 14.2 112 165-330 78-190 (191)
12 cd01844 SGNH_hydrolase_like_6 98.8 2.2E-07 4.7E-12 79.5 16.6 172 29-328 1-176 (177)
13 PRK10528 multifunctional acyl- 98.8 8E-08 1.7E-12 83.5 13.0 28 304-331 158-185 (191)
14 cd01830 XynE_like SGNH_hydrola 98.8 1.5E-07 3.2E-12 82.6 14.7 103 172-327 100-202 (204)
15 cd01823 SEST_like SEST_like. A 98.8 3.9E-07 8.5E-12 82.7 16.5 124 174-327 127-258 (259)
16 cd01838 Isoamyl_acetate_hydrol 98.7 2E-07 4.4E-12 80.5 12.8 111 173-329 87-199 (199)
17 cd01834 SGNH_hydrolase_like_2 98.7 2.6E-07 5.5E-12 79.4 13.4 121 159-328 63-191 (191)
18 cd01821 Rhamnogalacturan_acety 98.7 4.5E-07 9.8E-12 78.9 13.9 110 173-329 89-198 (198)
19 PF13472 Lipase_GDSL_2: GDSL-l 98.7 3.7E-07 8E-12 76.7 12.9 110 159-321 63-179 (179)
20 cd01820 PAF_acetylesterase_lik 98.7 2.8E-07 6.1E-12 81.4 12.6 114 165-333 100-214 (214)
21 cd01824 Phospholipase_B_like P 98.7 3.1E-06 6.8E-11 78.3 19.0 253 25-332 8-286 (288)
22 cd01827 sialate_O-acetylestera 98.7 7.7E-07 1.7E-11 76.6 14.0 113 159-329 69-187 (188)
23 cd01825 SGNH_hydrolase_peri1 S 98.6 3.3E-07 7.2E-12 78.7 9.4 111 173-331 76-187 (189)
24 cd01822 Lysophospholipase_L1_l 98.5 2.5E-06 5.5E-11 72.4 14.2 25 305-329 152-176 (177)
25 cd01835 SGNH_hydrolase_like_3 98.5 8.1E-06 1.8E-10 70.6 15.6 79 194-327 113-191 (193)
26 cd01831 Endoglucanase_E_like E 98.4 1.1E-05 2.5E-10 68.3 14.1 23 307-329 146-168 (169)
27 cd00229 SGNH_hydrolase SGNH_hy 98.3 6.3E-06 1.4E-10 68.7 11.1 115 158-327 66-186 (187)
28 cd01833 XynB_like SGNH_hydrola 98.3 1.1E-05 2.3E-10 67.4 11.3 106 165-329 51-157 (157)
29 cd01841 NnaC_like NnaC (CMP-Ne 98.3 2.9E-05 6.4E-10 65.8 13.6 110 165-327 62-172 (174)
30 cd01828 sialate_O-acetylestera 98.1 3.3E-05 7.3E-10 65.2 10.8 108 165-329 59-168 (169)
31 cd01829 SGNH_hydrolase_peri2 S 98.0 4.2E-05 9.2E-10 66.4 10.4 112 171-330 88-199 (200)
32 cd04502 SGNH_hydrolase_like_7 98.0 0.0002 4.4E-09 60.6 13.9 109 165-328 61-170 (171)
33 PF14606 Lipase_GDSL_3: GDSL-l 97.8 0.00019 4.2E-09 61.2 9.9 172 28-329 2-177 (178)
34 cd04506 SGNH_hydrolase_YpmR_li 97.6 0.00054 1.2E-08 59.6 10.5 100 174-327 102-203 (204)
35 COG2755 TesA Lysophospholipase 97.2 0.0094 2E-07 52.2 13.5 24 308-331 187-210 (216)
36 cd01826 acyloxyacyl_hydrolase_ 97.1 0.0041 9E-08 57.3 9.7 125 173-327 148-304 (305)
37 cd01840 SGNH_hydrolase_yrhL_li 97.0 0.0032 7E-08 52.2 7.6 25 305-329 126-150 (150)
38 KOG3670 Phospholipase [Lipid t 96.0 0.52 1.1E-05 44.9 16.2 30 302-331 323-352 (397)
39 KOG3035 Isoamyl acetate-hydrol 95.4 0.038 8.3E-07 48.2 5.9 110 174-330 96-209 (245)
40 COG2845 Uncharacterized protei 87.6 2.6 5.6E-05 39.2 7.6 109 175-330 206-318 (354)
41 cd01842 SGNH_hydrolase_like_5 86.8 8.5 0.00019 32.9 9.8 21 308-328 161-181 (183)
42 PLN02757 sirohydrochlorine fer 81.8 4 8.7E-05 34.1 5.7 64 180-266 60-126 (154)
43 PRK13384 delta-aminolevulinic 78.5 7.4 0.00016 36.2 6.7 64 175-256 58-121 (322)
44 cd04824 eu_ALAD_PBGS_cysteine_ 77.2 8.4 0.00018 35.8 6.7 66 175-256 48-114 (320)
45 cd00384 ALAD_PBGS Porphobilino 76.4 9.8 0.00021 35.3 6.9 65 174-256 47-111 (314)
46 cd04823 ALAD_PBGS_aspartate_ri 75.8 9.1 0.0002 35.6 6.5 66 174-256 50-116 (320)
47 PF02633 Creatininase: Creatin 74.4 16 0.00035 32.5 7.8 61 176-263 84-144 (237)
48 cd03416 CbiX_SirB_N Sirohydroc 72.4 9.1 0.0002 29.0 5.0 53 180-255 46-98 (101)
49 PRK09283 delta-aminolevulinic 71.1 14 0.00031 34.4 6.7 64 175-256 56-119 (323)
50 PF00490 ALAD: Delta-aminolevu 70.9 13 0.00029 34.7 6.4 65 176-256 55-119 (324)
51 PF08885 GSCFA: GSCFA family; 70.1 30 0.00066 31.3 8.5 104 173-324 147-250 (251)
52 PF01903 CbiX: CbiX; InterPro 64.8 4.2 9.1E-05 31.1 1.7 54 181-257 40-93 (105)
53 cd03414 CbiX_SirB_C Sirohydroc 56.3 39 0.00084 26.2 5.9 51 179-254 46-96 (117)
54 KOG2794 Delta-aminolevulinic a 54.5 36 0.00079 31.0 5.9 67 174-256 65-131 (340)
55 cd03412 CbiK_N Anaerobic cobal 50.5 61 0.0013 25.8 6.3 52 177-254 55-106 (127)
56 COG0113 HemB Delta-aminolevuli 50.0 28 0.00061 32.3 4.6 67 174-256 57-123 (330)
57 PF06908 DUF1273: Protein of u 46.6 63 0.0014 27.6 6.0 28 172-199 23-50 (177)
58 PF08331 DUF1730: Domain of un 46.6 53 0.0011 23.8 4.9 65 190-256 9-78 (78)
59 PF08029 HisG_C: HisG, C-termi 46.5 21 0.00045 25.9 2.6 21 180-200 52-72 (75)
60 TIGR03455 HisG_C-term ATP phos 41.2 32 0.00069 26.4 3.1 23 178-200 74-96 (100)
61 PRK13660 hypothetical protein; 31.2 2.6E+02 0.0057 24.0 7.4 58 173-258 24-81 (182)
62 cd00419 Ferrochelatase_C Ferro 28.4 1.6E+02 0.0034 23.8 5.4 37 180-230 79-115 (135)
63 PRK07807 inosine 5-monophospha 28.4 82 0.0018 31.4 4.4 60 178-265 226-287 (479)
64 COG0276 HemH Protoheme ferro-l 27.4 1.8E+02 0.0039 27.4 6.2 22 181-202 105-126 (320)
65 KOG4079 Putative mitochondrial 27.0 30 0.00064 28.1 0.9 16 189-204 42-57 (169)
66 cd03411 Ferrochelatase_N Ferro 27.0 67 0.0015 26.6 3.1 24 180-203 101-124 (159)
67 PRK13717 conjugal transfer pro 25.9 1.1E+02 0.0023 24.7 3.8 26 221-246 70-95 (128)
68 COG1031 Uncharacterized Fe-S o 25.8 2.6E+02 0.0056 27.8 7.0 70 177-258 217-286 (560)
69 PF07555 NAGidase: beta-N-acet 25.8 3.2E+02 0.0069 25.5 7.6 25 174-198 87-111 (306)
70 TIGR01091 upp uracil phosphori 25.0 1.7E+02 0.0036 25.5 5.3 48 178-257 136-183 (207)
71 COG1209 RfbA dTDP-glucose pyro 24.4 2.8E+02 0.0062 25.5 6.7 84 182-276 36-148 (286)
72 cd03413 CbiK_C Anaerobic cobal 23.1 87 0.0019 24.0 2.8 19 180-198 44-62 (103)
73 COG3581 Uncharacterized protei 22.0 1.2E+02 0.0027 29.3 4.0 47 186-257 327-373 (420)
74 PF08282 Hydrolase_3: haloacid 21.9 39 0.00085 29.2 0.8 16 26-41 201-216 (254)
75 PRK06520 5-methyltetrahydropte 21.8 1.4E+02 0.003 28.7 4.5 30 168-197 160-189 (368)
76 cd03409 Chelatase_Class_II Cla 20.9 1.2E+02 0.0027 22.3 3.3 23 180-202 47-69 (101)
77 PRK06233 hypothetical protein; 20.8 1.5E+02 0.0032 28.5 4.5 30 169-198 162-191 (372)
78 PRK00129 upp uracil phosphorib 20.5 2.7E+02 0.0059 24.2 5.8 46 179-256 139-184 (209)
79 PF06812 ImpA-rel_N: ImpA-rela 20.1 40 0.00087 23.2 0.3 8 307-314 53-60 (62)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=6.1e-79 Score=575.43 Aligned_cols=310 Identities=44% Similarity=0.810 Sum_probs=274.0
Q ss_pred CCCccEEEEcCCCcccCCCCCccchhcccCCCCCCCCCCCCCCcccccCCccHHHHHHHhcCCCCCCCCCCCCCCCCCCc
Q 046560 24 NEKLLGIMAFGDSILDTGNNNNLISLIKCNFPPYGQDFIGGKPTGRFCNGKVLTDLIAEGLGVKETVPAYFDPNLQSKDL 103 (333)
Q Consensus 24 ~~~~~~l~vFGDSlsD~Gn~~~l~~~~~~~~~Pyg~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~p~yl~~~~~~~~~ 103 (333)
+..+++|||||||++|+||++++.+..+++.||||++|++++||||||||++|+||||+.||+++++|||+++..++.++
T Consensus 24 ~~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~~ppyl~~~~~~~~~ 103 (351)
T PLN03156 24 CAKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPAIPAYLDPSYNISDF 103 (351)
T ss_pred cCCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCCCCCCcCcccCchhh
Confidence 56799999999999999999887766678899999999987799999999999999999999966899999886666789
Q ss_pred CCccceeecccccCCCCCCCccccCHHHHHHHHHHHHHHHHHhhChhhHhhhhccceEEEE---eecC------------
Q 046560 104 ATGVCFASGGAGLDPLTSSITSVIPISEQLENFREYIRKLEGLVGEEGANKIISNSLFLLL---IKYD------------ 168 (333)
Q Consensus 104 ~~g~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~aLf~i~---n~~~------------ 168 (333)
.+|+|||+|||++++.+......+++..||++|..+++++....|...+++.++++||+|| |||.
T Consensus 104 ~~GvNFA~agag~~~~~~~~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~~i~iG~NDy~~~~~~~~~~~~~ 183 (351)
T PLN03156 104 ATGVCFASAGTGYDNATSDVLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALYLISIGTNDFLENYYTFPGRRSQ 183 (351)
T ss_pred cccceeecCCccccCCCccccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeEEEEecchhHHHHhhcccccccc
Confidence 9999999999998876543234578999999999998887776676556677899999999 6652
Q ss_pred --hhHHHHHHHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhC
Q 046560 169 --ISTYTSMLVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFL 246 (333)
Q Consensus 169 --~~~~~~~~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~ 246 (333)
++++++.+++.+.+.|++||++|||||+|+|+||+||+|..+.....+..+|.+.+|+++..||++|++++++|++++
T Consensus 184 ~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~ 263 (351)
T PLN03156 184 YTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMGGSECVEEYNDVALEFNGKLEKLVTKLNKEL 263 (351)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 245777889999999999999999999999999999999876543223468999999999999999999999999999
Q ss_pred CCCeEEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHHH
Q 046560 247 PQAKIVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPIL 326 (333)
Q Consensus 247 ~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~ 326 (333)
|+++|+++|+|+++.++++||++|||++++++||+.|.++....|+.....+|++|++|+|||++||||++|++||+.++
T Consensus 264 pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~~~~~~C~~~~~~~C~~p~~yvfWD~~HPTe~a~~~iA~~~~ 343 (351)
T PLN03156 264 PGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMFEMGYLCNRNNPFTCSDADKYVFWDSFHPTEKTNQIIANHVV 343 (351)
T ss_pred CCCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCCCCccccCCCCCCccCCccceEEecCCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888888889997553489999999999999999999999999999
Q ss_pred hcccCCC
Q 046560 327 QDLKKNF 333 (333)
Q Consensus 327 ~~~~~~~ 333 (333)
++++++|
T Consensus 344 ~~l~~~~ 350 (351)
T PLN03156 344 KTLLSKF 350 (351)
T ss_pred HHHHHhh
Confidence 9987654
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=6.4e-73 Score=529.96 Aligned_cols=299 Identities=51% Similarity=0.822 Sum_probs=262.0
Q ss_pred cEEEEcCCCcccCCCCCccchhcccCCCCCCCCCCCCCCcccccCCccHHHHHHHhcCCCCCCCCCCCCCCCCCCcCCcc
Q 046560 28 LGIMAFGDSILDTGNNNNLISLIKCNFPPYGQDFIGGKPTGRFCNGKVLTDLIAEGLGVKETVPAYFDPNLQSKDLATGV 107 (333)
Q Consensus 28 ~~l~vFGDSlsD~Gn~~~l~~~~~~~~~Pyg~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~p~yl~~~~~~~~~~~g~ 107 (333)
++||+||||++|+||+.++.+..+++.||||++|+++ |+||||||++|+||||+.||++..+|+|+.+.. +.++.+|+
T Consensus 1 ~al~vFGDS~sD~Gn~~~~~~~~~~~~~PyG~~~~~~-p~GRfSnG~~~~d~la~~lgl~~~~p~~~~~~~-~~~~~~G~ 78 (315)
T cd01837 1 PALFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPGR-PTGRFSNGRLIIDFIAEALGLPLLPPPYLSPNG-SSDFLTGV 78 (315)
T ss_pred CcEEEecCccccCCCccccccccccCCCCCcCcCCCC-CCccccCCchhhhhhhhhccCCCCCCCccCccc-cchhhccc
Confidence 4799999999999999877654457799999999984 999999999999999999999755788876532 25678899
Q ss_pred ceeecccccCCCCCCCccccCHHHHHHHHHHHHHHHHHhhChhhHhhhhccceEEEE---eecC------------hhHH
Q 046560 108 CFASGGAGLDPLTSSITSVIPISEQLENFREYIRKLEGLVGEEGANKIISNSLFLLL---IKYD------------ISTY 172 (333)
Q Consensus 108 NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~aLf~i~---n~~~------------~~~~ 172 (333)
|||+|||++.+.+.....+++|..||++|+++++++....|.+.+.+..+++||+|| |||. ..++
T Consensus 79 NfA~gGA~~~~~~~~~~~~~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~ 158 (315)
T cd01837 79 NFASGGAGILDSTGFLGSVISLSVQLEYFKEYKERLRALVGEEAAADILSKSLFLISIGSNDYLNNYFANPTRQYEVEAY 158 (315)
T ss_pred eecccCCccccCCcceeeeecHHHHHHHHHHHHHHHHHhhCHHHHHHHHhCCEEEEEecccccHHHHhcCccccCCHHHH
Confidence 999999999876533234679999999999998887777777666777899999998 7752 3468
Q ss_pred HHHHHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEE
Q 046560 173 TSMLVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIV 252 (333)
Q Consensus 173 ~~~~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~ 252 (333)
++.+++++.++|++||++|||||+|+|+||+||+|..+.....+..+|.+.+|+++..||++|+++|++|++++|+++|+
T Consensus 159 ~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~ 238 (315)
T cd01837 159 VPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPGAKFV 238 (315)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 89999999999999999999999999999999999988654333468999999999999999999999999999999999
Q ss_pred EeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHHHhc
Q 046560 253 YVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPILQD 328 (333)
Q Consensus 253 ~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 328 (333)
++|+|+++.++++||++|||+++.++||+.|..+....|+.....+|.+|++|+|||++|||+++|++||+.++.+
T Consensus 239 ~~D~y~~~~~i~~np~~yGf~~~~~aCc~~g~~~~~~~c~~~~~~~C~~p~~y~fwD~~HpT~~~~~~ia~~~~~g 314 (315)
T cd01837 239 YADIYNALLDLIQNPAKYGFENTLKACCGTGGPEGGLLCNPCGSTVCPDPSKYVFWDGVHPTEAANRIIADALLSG 314 (315)
T ss_pred EEehhHHHHHHHhChhhcCCcCCCcCccCCCCCCcccccCCCCCCcCCCccceEEeCCCChHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999988766677887654458999999999999999999999999999876
No 3
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=1.6e-59 Score=445.75 Aligned_cols=257 Identities=20% Similarity=0.296 Sum_probs=215.9
Q ss_pred CCCccEEEEcCCCcccCCCCCccchhcccCCCCCCCCCCCCCCcccccCCccHHHHHHHhcCCCCCCCCCCCCCCCCCCc
Q 046560 24 NEKLLGIMAFGDSILDTGNNNNLISLIKCNFPPYGQDFIGGKPTGRFCNGKVLTDLIAEGLGVKETVPAYFDPNLQSKDL 103 (333)
Q Consensus 24 ~~~~~~l~vFGDSlsD~Gn~~~l~~~~~~~~~Pyg~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~p~yl~~~~~~~~~ 103 (333)
...|++||+||||++|+||+.++.+. ...||||++| +||||||++|+|||| .|||++.
T Consensus 139 ~~~~~ai~vFGDSlsDtGnn~y~~t~--~~~PPyG~~f-----tGRFSNG~v~~DfLA--------~~pyl~~------- 196 (408)
T PRK15381 139 LGDITRLVFFGDSLSDSLGRMFEKTH--HILPSYGQYF-----GGRFTNGFTWTEFLS--------SPHFLGK------- 196 (408)
T ss_pred cCCCCeEEEeCCccccCCCccccccc--cCCCCCCCCC-----CcccCCCchhhheec--------cccccCC-------
Confidence 36899999999999999887766443 4689999876 799999999999999 2557641
Q ss_pred CCccceeecccccCCCCCC--C-ccccCHHHHHHHHHHHHHHHHHhhChhhHhhhhccceEEEE---eecC--hhHHHHH
Q 046560 104 ATGVCFASGGAGLDPLTSS--I-TSVIPISEQLENFREYIRKLEGLVGEEGANKIISNSLFLLL---IKYD--ISTYTSM 175 (333)
Q Consensus 104 ~~g~NfA~gGA~~~~~~~~--~-~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~aLf~i~---n~~~--~~~~~~~ 175 (333)
+|+|||+|||++...... . ....+|..||++|+.. +++||+|| |||. ..++++.
T Consensus 197 -~G~NFA~GGA~~~t~~~~~~~~~~~~~L~~Qv~~~~~~-----------------~~aL~lV~iG~NDy~~~~~~~v~~ 258 (408)
T PRK15381 197 -EMLNFAEGGSTSASYSCFNCIGDFVSNTDRQVASYTPS-----------------HQDLAIFLLGANDYMTLHKDNVIM 258 (408)
T ss_pred -CCceEeecccccccccccccccCccCCHHHHHHHHHhc-----------------CCcEEEEEeccchHHHhHHHHHHH
Confidence 689999999998632110 0 1236799999985431 56899998 8875 3457789
Q ss_pred HHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEec
Q 046560 176 LVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYVD 255 (333)
Q Consensus 176 ~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 255 (333)
+++++..+|++||++|||||+|+|+||+||+|..+.. ...+.+|.++..||++|+++|++|++++|+++|+++|
T Consensus 259 vV~~~~~~l~~Ly~lGARk~vV~nlpPlGC~P~~~~~------~~~~~~N~~a~~fN~~L~~~L~~L~~~~pg~~ivy~D 332 (408)
T PRK15381 259 VVEQQIDDIEKIISGGVNNVLVMGIPDLSLTPYGKHS------DEKRKLKDESIAHNALLKTNVEELKEKYPQHKICYYE 332 (408)
T ss_pred HHHHHHHHHHHHHHcCCcEEEEeCCCCCCCcchhhcc------CchHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 9999999999999999999999999999999987642 1257899999999999999999999999999999999
Q ss_pred cchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHHHhcccC
Q 046560 256 IYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPILQDLKK 331 (333)
Q Consensus 256 ~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~~~~ 331 (333)
+|+++.++++||++|||++++. ||+.|..+....|.+... .|. +|+|||.+|||+++|+++|+.+-+=|..
T Consensus 333 ~y~~~~~ii~nP~~yGF~~~~~-cCg~G~~~~~~~C~p~~~-~C~---~YvFWD~vHPTe~ah~iiA~~~~~~i~~ 403 (408)
T PRK15381 333 TADAFKVIMEAASNIGYDTENP-YTHHGYVHVPGAKDPQLD-ICP---QYVFNDLVHPTQEVHHCFAIMLESFIAH 403 (408)
T ss_pred hHHHHHHHHhCHHhcCCCcccc-ccCCCccCCccccCcccC-CCC---ceEecCCCCChHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999876 999887666677876544 785 9999999999999999999998776554
No 4
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=1.9e-59 Score=432.22 Aligned_cols=260 Identities=19% Similarity=0.252 Sum_probs=215.2
Q ss_pred ccEEEEcCCCcccCCCCCccchhcccCCCCCCCCCCCCCCcccccCCccHHHHHHHhcCCCCCCCCCCCCCCCCCCcCCc
Q 046560 27 LLGIMAFGDSILDTGNNNNLISLIKCNFPPYGQDFIGGKPTGRFCNGKVLTDLIAEGLGVKETVPAYFDPNLQSKDLATG 106 (333)
Q Consensus 27 ~~~l~vFGDSlsD~Gn~~~l~~~~~~~~~Pyg~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~p~yl~~~~~~~~~~~g 106 (333)
|++|||||||++|+||++++. ++ ++|+||||||++++|++++.+|++ .+ +++ .+.+..+|
T Consensus 1 ~~~i~vFGDSl~D~Gn~~~~~--------~~------~~~~gRFsnG~~~~d~~~~~~~~~-~~---~~~--~~~~~~~G 60 (281)
T cd01847 1 FSRVVVFGDSLSDVGTYNRAG--------VG------AAGGGRFTVNDGSIWSLGVAEGYG-LT---TGT--ATPTTPGG 60 (281)
T ss_pred CCceEEecCcccccCCCCccc--------cC------CCCCcceecCCcchHHHHHHHHcC-CC---cCc--CcccCCCC
Confidence 579999999999999987652 11 128999999999999999999985 22 221 24567789
Q ss_pred cceeecccccCCCCCCC---ccccCHHHHHHHHHHHHHHHHHhhChhhHhhhhccceEEEE---eecC------------
Q 046560 107 VCFASGGAGLDPLTSSI---TSVIPISEQLENFREYIRKLEGLVGEEGANKIISNSLFLLL---IKYD------------ 168 (333)
Q Consensus 107 ~NfA~gGA~~~~~~~~~---~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~aLf~i~---n~~~------------ 168 (333)
+|||+|||++.+.+... ...++|..||++|++.+. ...+++||+|| |||.
T Consensus 61 ~NfA~gGa~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~------------~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~ 128 (281)
T cd01847 61 TNYAQGGARVGDTNNGNGAGAVLPSVTTQIANYLAAGG------------GFDPNALYTVWIGGNDLIAALAALTTATTT 128 (281)
T ss_pred ceeeccCccccCCCCccccccCCCCHHHHHHHHHHhcC------------CCCCCeEEEEecChhHHHHHHhhccccccc
Confidence 99999999988754321 235789999999987542 12688999998 6651
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhh
Q 046560 169 ---ISTYTSMLVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSF 245 (333)
Q Consensus 169 ---~~~~~~~~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~ 245 (333)
+.++++.+++++..+|++|+++|||+|+|+++||+||+|..+... ..|.+.+++++..||++|+.+|++|+.+
T Consensus 129 ~~~~~~~~~~~~~~~~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~----~~~~~~~n~~~~~~N~~L~~~l~~l~~~ 204 (281)
T cd01847 129 QAAAVAAAATAAADLASQVKNLLDAGARYILVPNLPDVSYTPEAAGTP----AAAAALASALSQTYNQTLQSGLNQLGAN 204 (281)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCcccCcchhhcc----chhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 235678899999999999999999999999999999999887643 3588999999999999999999999764
Q ss_pred CCCCeEEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHH
Q 046560 246 LPQAKIVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPI 325 (333)
Q Consensus 246 ~~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~ 325 (333)
+|+++|+|.++.++++||++|||++++++||+.+... .|+......|.+|++|+|||++||||++|++||+++
T Consensus 205 ----~i~~~D~~~~~~~i~~nP~~yGf~~~~~~CC~~~~~~---~~~~~~~~~c~~~~~y~fwD~~HpTe~~~~~ia~~~ 277 (281)
T cd01847 205 ----NIIYVDTATLLKEVVANPAAYGFTNTTTPACTSTSAA---GSGAATLVTAAAQSTYLFADDVHPTPAGHKLIAQYA 277 (281)
T ss_pred ----eEEEEEHHHHHHHHHhChHhcCccCCCccccCCCCcc---ccccccccCCCCccceeeccCCCCCHHHHHHHHHHH
Confidence 8999999999999999999999999999999865432 254333348999999999999999999999999999
Q ss_pred Hhcc
Q 046560 326 LQDL 329 (333)
Q Consensus 326 ~~~~ 329 (333)
++.+
T Consensus 278 ~~~l 281 (281)
T cd01847 278 LSRL 281 (281)
T ss_pred HHhC
Confidence 8753
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=1.4e-54 Score=397.26 Aligned_cols=256 Identities=24% Similarity=0.398 Sum_probs=212.8
Q ss_pred EEEEcCCCcccCCCCCccchhcccCCCCCCCCCCCCCCcccccCCccHHHHHHHhcCCCCCCCCCCCCCCCCCCcCCccc
Q 046560 29 GIMAFGDSILDTGNNNNLISLIKCNFPPYGQDFIGGKPTGRFCNGKVLTDLIAEGLGVKETVPAYFDPNLQSKDLATGVC 108 (333)
Q Consensus 29 ~l~vFGDSlsD~Gn~~~l~~~~~~~~~Pyg~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~p~yl~~~~~~~~~~~g~N 108 (333)
++|+|||||+|+||+.++... ..+|.+..| |+||||||++|+|+||+.+|++. ..+|+|
T Consensus 1 ~l~vFGDS~sD~Gn~~~~~~~---~~~~~~~~~----~~grfsnG~~w~d~la~~lg~~~--------------~~~~~N 59 (270)
T cd01846 1 RLVVFGDSLSDTGNIFKLTGG---SNPPPSPPY----FGGRFSNGPVWVEYLAATLGLSG--------------LKQGYN 59 (270)
T ss_pred CeEEeeCccccCCcchhhcCC---CCCCCCCCC----CCCccCCchhHHHHHHHHhCCCc--------------cCCcce
Confidence 589999999999998654321 123333333 78999999999999999999841 235899
Q ss_pred eeecccccCCCCC--CCccccCHHHHHHHHHHHHHHHHHhhChhhHhhhhccceEEEE---eecCh--------hHHHHH
Q 046560 109 FASGGAGLDPLTS--SITSVIPISEQLENFREYIRKLEGLVGEEGANKIISNSLFLLL---IKYDI--------STYTSM 175 (333)
Q Consensus 109 fA~gGA~~~~~~~--~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~aLf~i~---n~~~~--------~~~~~~ 175 (333)
||+|||++..... ......++..||++|+++++. +..+++|++|+ ||+.. ...++.
T Consensus 60 ~A~~Ga~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~-----------~~~~~~l~~i~~G~ND~~~~~~~~~~~~~~~~~ 128 (270)
T cd01846 60 YAVGGATAGAYNVPPYPPTLPGLSDQVAAFLAAHKL-----------RLPPDTLVAIWIGANDLLNALDLPQNPDTLVTR 128 (270)
T ss_pred eEecccccCCcccCCCCCCCCCHHHHHHHHHHhccC-----------CCCCCcEEEEEeccchhhhhccccccccccHHH
Confidence 9999999876432 123356899999999887541 23577899998 77632 357889
Q ss_pred HHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEec
Q 046560 176 LVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYVD 255 (333)
Q Consensus 176 ~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 255 (333)
+++++.+.|++|+++|+|+|+|+++||++|+|..+..... ..+.++.+++.||++|++++++|++++|+++|+++|
T Consensus 129 ~~~~~~~~i~~l~~~g~~~i~v~~~p~~~~~P~~~~~~~~----~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 204 (270)
T cd01846 129 AVDNLFQALQRLYAAGARNFLVLNLPDLGLTPAFQAQGDA----VAARATALTAAYNAKLAEKLAELKAQHPGVNILLFD 204 (270)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccCCcc----cHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 9999999999999999999999999999999998865432 126899999999999999999999999999999999
Q ss_pred cchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHHHh
Q 046560 256 IYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPILQ 327 (333)
Q Consensus 256 ~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 327 (333)
+|.++.++++||++|||+++.++||+.+. |.... ..|.+|++|+|||++|||+++|++||+++++
T Consensus 205 ~~~~~~~~~~~p~~yGf~~~~~~C~~~~~------~~~~~-~~c~~~~~y~fwD~~HpT~~~~~~iA~~~~~ 269 (270)
T cd01846 205 TNALFNDILDNPAAYGFTNVTDPCLDYVY------SYSPR-EACANPDKYLFWDEVHPTTAVHQLIAEEVAA 269 (270)
T ss_pred hHHHHHHHHhCHHhcCCCcCcchhcCCCc------ccccc-CCCCCccceEEecCCCccHHHHHHHHHHHHh
Confidence 99999999999999999999999998532 64433 4899999999999999999999999999986
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=100.00 E-value=1e-39 Score=298.98 Aligned_cols=290 Identities=23% Similarity=0.328 Sum_probs=205.0
Q ss_pred ccccCCCccEEEEcCCCcccCCCCCccchhcccCCC-CCCCCCCCCCCccccc--CCccHHHHHHHhcCCCCCCCCC---
Q 046560 20 QLQENEKLLGIMAFGDSILDTGNNNNLISLIKCNFP-PYGQDFIGGKPTGRFC--NGKVLTDLIAEGLGVKETVPAY--- 93 (333)
Q Consensus 20 ~~~~~~~~~~l~vFGDSlsD~Gn~~~l~~~~~~~~~-Pyg~~~~~~~~~GRfS--nG~~~~d~la~~lgl~~~~p~y--- 93 (333)
+.+..++|++|+||||||||+|+....... ...+ -||. ++..+++ +|.+|+++.++.+|.-...+.+
T Consensus 22 ~~~~~~~~~~l~vfGDSlSDsg~~~~~a~~--~~~~~~~~~-----~~gp~~~~G~~~~~~~~~p~~lg~l~~~~~~~~~ 94 (370)
T COG3240 22 PAPSLAPFQRLVVFGDSLSDSGNYYRPAGH--HGDPGSYGT-----IPGPSYQNGNGYTYVTVVPETLGQLGVNHDFTYA 94 (370)
T ss_pred CcccccccceEEEeccchhhcccccCcccc--cCCcccccc-----ccCCcccCCCceeeeccchhhhcccccccccccc
Confidence 344467899999999999999997533211 1111 1221 1333444 4678888888888810000111
Q ss_pred -CCCCCCCCCcCCccceeecccccCCCC---CCCccccCHHHHHHHHHHHHHHHHHhhChhh-HhhhhccceEEEE---e
Q 046560 94 -FDPNLQSKDLATGVCFASGGAGLDPLT---SSITSVIPISEQLENFREYIRKLEGLVGEEG-ANKIISNSLFLLL---I 165 (333)
Q Consensus 94 -l~~~~~~~~~~~g~NfA~gGA~~~~~~---~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~-~~~~~~~aLf~i~---n 165 (333)
-+++....-...|.|||+|||++.... .......++.+|+.+|+....... ++++. ........|+.+| |
T Consensus 95 ~~~~~~~~~~~a~gnd~A~gga~~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~--v~~~~~~~~l~p~~l~~~~ggan 172 (370)
T COG3240 95 AADPNGLYIHWAGGNDLAVGGARSTEPNTGNSIGASATSLAQQVGAFLAAGQGGF--VWPNYPAQGLDPSALYFLWGGAN 172 (370)
T ss_pred ccCcccccCcccccccHhhhccccccccccccccccccchHHHHHHHHHhcCCcc--ccccccccccCHHHHHHHhhcch
Confidence 122211222367999999999965433 112346789999999988754210 01110 0112245666666 6
Q ss_pred ecC---------hhHHHHHHHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHH
Q 046560 166 KYD---------ISTYTSMLVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLL 236 (333)
Q Consensus 166 ~~~---------~~~~~~~~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~ 236 (333)
||- .+.+.....+++...|++|.++|||+|+|+++||++.+|....... -.+.+.+++..||.-|.
T Consensus 173 d~~~~~~~~a~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~~~-----~~~~a~~~t~~~Na~L~ 247 (370)
T COG3240 173 DYLALPMLKAAAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAYGT-----EAIQASQATIAFNASLT 247 (370)
T ss_pred hhhcccccchhhhHHHhcchhhHHHHHHHHHHHhhccEEEEeeccccccccccccccc-----hHHHHHHHHHHHHHHHH
Confidence 652 1123334456799999999999999999999999999998875421 23378899999999999
Q ss_pred HHHHHHhhhCCCCeEEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHH
Q 046560 237 AEMKNLSSFLPQAKIVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEK 316 (333)
Q Consensus 237 ~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~ 316 (333)
+.|++++ .+|+.+|++.++++||.||++|||+|++.+||.....++ .|....+..|..|++|+|||.+|||++
T Consensus 248 ~~L~~~g-----~nIi~iD~~~llk~im~nPa~fGlant~~~~c~~~~~~~--~~~a~~p~~~~~~~~ylFaD~vHPTt~ 320 (370)
T COG3240 248 SQLEQLG-----GNIIRIDTYTLLKEIMTNPAEFGLANTTAPACDATVSNP--ACSASLPALCAAPQKYLFADSVHPTTA 320 (370)
T ss_pred HHHHHhc-----CcEEEeEhHHHHHHHHhCHHhcCcccCCCcccCcccCCc--ccccccccccCCccceeeecccCCchH
Confidence 9999985 799999999999999999999999999999998655443 676655546777889999999999999
Q ss_pred HHHHHHHHHHhccc
Q 046560 317 AYMIIASPILQDLK 330 (333)
Q Consensus 317 ~h~~iA~~~~~~~~ 330 (333)
+|++||++++..+.
T Consensus 321 ~H~liAeyila~l~ 334 (370)
T COG3240 321 VHHLIAEYILARLA 334 (370)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998774
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.92 E-value=2.7e-25 Score=197.29 Aligned_cols=215 Identities=30% Similarity=0.419 Sum_probs=154.6
Q ss_pred EEEcCCCcccCCCCCccchhcccCCCCCCCCCCCCCCcccccCCccHHHHHHHhcCCCCCCCCCCCCCCCCCCcCCccce
Q 046560 30 IMAFGDSILDTGNNNNLISLIKCNFPPYGQDFIGGKPTGRFCNGKVLTDLIAEGLGVKETVPAYFDPNLQSKDLATGVCF 109 (333)
Q Consensus 30 l~vFGDSlsD~Gn~~~l~~~~~~~~~Pyg~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~p~yl~~~~~~~~~~~g~Nf 109 (333)
|++||||+||. +|+++|..|.+.++..+.-. . ..+ ....-..+.|+
T Consensus 1 i~~fGDS~td~---------------------------~~~~~~~~~~~~~~~~l~~~-~---~~~---~~~~~~~~~n~ 46 (234)
T PF00657_consen 1 IVVFGDSLTDG---------------------------GGDSNGGGWPEGLANNLSSC-L---GAN---QRNSGVDVSNY 46 (234)
T ss_dssp EEEEESHHHHT---------------------------TTSSTTCTHHHHHHHHCHHC-C---HHH---HHCTTEEEEEE
T ss_pred CEEEeehhccc---------------------------CCCCCCcchhhhHHHHHhhc-c---ccc---cCCCCCCeecc
Confidence 68999999999 24677899999999987211 0 000 00111346899
Q ss_pred eecccccCCCCCCCcc-ccCHHHHHHHHHHHHHHHHHhhChhhHhhhhccceEEEE---eec-------ChhHHHHHHHH
Q 046560 110 ASGGAGLDPLTSSITS-VIPISEQLENFREYIRKLEGLVGEEGANKIISNSLFLLL---IKY-------DISTYTSMLVS 178 (333)
Q Consensus 110 A~gGA~~~~~~~~~~~-~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~aLf~i~---n~~-------~~~~~~~~~v~ 178 (333)
|++|+++......... ...+..|+...... ....+.+|++|+ ||+ .....++.+++
T Consensus 47 a~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~lv~i~~G~ND~~~~~~~~~~~~~~~~~~~ 113 (234)
T PF00657_consen 47 AISGATSDGDLYNLWAQVQNISQQISRLLDS-------------KSFYDPDLVVIWIGTNDYFNNRDSSDNNTSVEEFVE 113 (234)
T ss_dssp E-TT--CC-HGGCCCCTCHHHHHHHHHHHHH-------------HHHHTTSEEEEE-SHHHHSSCCSCSTTHHHHHHHHH
T ss_pred ccCCCccccccchhhHHHHHHHHHhhccccc-------------cccCCcceEEEecccCcchhhcccchhhhhHhhHhh
Confidence 9999996532210001 11122333222111 112366889888 886 34667889999
Q ss_pred HHHHHHHHHHhcCce-----EEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCC-CCeEE
Q 046560 179 WTSTIIKDLYEVGVR-----KIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLP-QAKIV 252 (333)
Q Consensus 179 ~~~~~i~~L~~~GAr-----~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~-~~~i~ 252 (333)
.+.+.|++|.+.|+| +++++++||++|.|....... ....|.+.+++.+..||++|++.++++++.++ +.++.
T Consensus 114 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~n~~l~~~~~~l~~~~~~~~~v~ 192 (234)
T PF00657_consen 114 NLRNAIKRLRSNGARLIIVANIVVINLPPIGCLPAWSSNNK-DSASCIERLNAIVAAFNSALREVAAQLRKDYPKGANVP 192 (234)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEEEEEHHC-GGGSTTHHHTHT-TTCTTHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCTEE
T ss_pred hhhhhhhHHhccCCccccccccccccccccccccccccccc-cccccchhhHHHHHHHHHHHHHHhhhcccccccCCceE
Confidence 999999999999999 999999999999888665432 24579999999999999999999999988765 78999
Q ss_pred EeccchhHHhh--hcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHH
Q 046560 253 YVDIYNPLLDL--INNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPI 325 (333)
Q Consensus 253 ~~D~~~~~~~i--~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~ 325 (333)
++|+++.+.++ ..+|.. ++|+|||++|||+++|++||++|
T Consensus 193 ~~D~~~~~~~~~~~~~~~~---------------------------------~~~~~~D~~Hpt~~g~~~iA~~i 234 (234)
T PF00657_consen 193 YFDIYSIFSDMYGIQNPEN---------------------------------DKYMFWDGVHPTEKGHKIIAEYI 234 (234)
T ss_dssp EEEHHHHHHHHHHHHHGGH---------------------------------HHCBBSSSSSB-HHHHHHHHHHH
T ss_pred EEEHHHHHHHhhhccCccc---------------------------------ceeccCCCcCCCHHHHHHHHcCC
Confidence 99999999998 666655 47999999999999999999986
No 8
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=99.00 E-value=8.5e-09 Score=88.55 Aligned_cols=179 Identities=19% Similarity=0.173 Sum_probs=105.9
Q ss_pred EEEEcCCCcccCCCCCccchhcccCCCCCCCCCCCCCCcccccCCccHHHHHHHhcCCCCCCCCCCCCCCCCCCcCCccc
Q 046560 29 GIMAFGDSILDTGNNNNLISLIKCNFPPYGQDFIGGKPTGRFCNGKVLTDLIAEGLGVKETVPAYFDPNLQSKDLATGVC 108 (333)
Q Consensus 29 ~l~vFGDSlsD~Gn~~~l~~~~~~~~~Pyg~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~p~yl~~~~~~~~~~~g~N 108 (333)
+|++||||+++--... +....+..|++.|++.+.-+ . + + ..-.|
T Consensus 1 ~i~~~GDSit~G~~~~-----------------------~~~~~~~~~~~~l~~~l~~~-~-~--------~---~~~~N 44 (185)
T cd01832 1 RYVALGDSITEGVGDP-----------------------VPDGGYRGWADRLAAALAAA-D-P--------G---IEYAN 44 (185)
T ss_pred CeeEecchhhcccCCC-----------------------CCCCccccHHHHHHHHhccc-C-C--------C---ceEee
Confidence 4889999999833210 01123678999999988541 0 0 0 12479
Q ss_pred eeecccccCCCCCCCccccCHHHHHHHHHHHHHHHHHhhChhhHhhhhccceEEEE---eecCh-hHHHHHHHHHHHHHH
Q 046560 109 FASGGAGLDPLTSSITSVIPISEQLENFREYIRKLEGLVGEEGANKIISNSLFLLL---IKYDI-STYTSMLVSWTSTII 184 (333)
Q Consensus 109 fA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~aLf~i~---n~~~~-~~~~~~~v~~~~~~i 184 (333)
.+++|++... .+..|+..- .. ..-.+.+|. ||... ....++..+++...|
T Consensus 45 ~g~~G~~~~~---------~~~~~~~~~---~~--------------~~~d~vii~~G~ND~~~~~~~~~~~~~~~~~~i 98 (185)
T cd01832 45 LAVRGRRTAQ---------ILAEQLPAA---LA--------------LRPDLVTLLAGGNDILRPGTDPDTYRADLEEAV 98 (185)
T ss_pred ccCCcchHHH---------HHHHHHHHH---Hh--------------cCCCEEEEeccccccccCCCCHHHHHHHHHHHH
Confidence 9999987421 012232211 00 012344443 66532 233455666777777
Q ss_pred HHHHhcCceEEEEecCCCC-CcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEeccchhHHhh
Q 046560 185 KDLYEVGVRKIAIFSTLPL-GCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYVDIYNPLLDL 263 (333)
Q Consensus 185 ~~L~~~GAr~~vv~~lppl-g~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i 263 (333)
+++...+++ ++++++||. +..|. ....++....+|+.|++..++. ++.++|++..+.
T Consensus 99 ~~i~~~~~~-vil~~~~~~~~~~~~------------~~~~~~~~~~~n~~l~~~a~~~-------~v~~vd~~~~~~-- 156 (185)
T cd01832 99 RRLRAAGAR-VVVFTIPDPAVLEPF------------RRRVRARLAAYNAVIRAVAARY-------GAVHVDLWEHPE-- 156 (185)
T ss_pred HHHHhCCCE-EEEecCCCccccchh------------HHHHHHHHHHHHHHHHHHHHHc-------CCEEEecccCcc--
Confidence 777767775 777888887 32221 1223455778888877766542 467888765421
Q ss_pred hcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHHHh
Q 046560 264 INNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPILQ 327 (333)
Q Consensus 264 ~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 327 (333)
+ . . .+++.-|++||++++|++||+.+.+
T Consensus 157 ---------------~-~-------------------~-~~~~~~DgiHpn~~G~~~~A~~i~~ 184 (185)
T cd01832 157 ---------------F-A-------------------D-PRLWASDRLHPSAAGHARLAALVLA 184 (185)
T ss_pred ---------------c-C-------------------C-ccccccCCCCCChhHHHHHHHHHhh
Confidence 0 0 0 0123349999999999999999875
No 9
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.98 E-value=3.9e-08 Score=84.38 Aligned_cols=113 Identities=19% Similarity=0.254 Sum_probs=70.6
Q ss_pred eecChhHHHHHHHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhh
Q 046560 165 IKYDISTYTSMLVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSS 244 (333)
Q Consensus 165 n~~~~~~~~~~~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~ 244 (333)
||.....-..+..+.+.+.|+.+.+.|++ ++++..+|....+... +....++....||+.+++..++.
T Consensus 70 ND~~~~~~~~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~~---------~~~~~~~~~~~~n~~~~~~a~~~-- 137 (183)
T cd04501 70 NDIIVNTSLEMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWKP---------QWLRPANKLKSLNRWLKDYAREN-- 137 (183)
T ss_pred CccccCCCHHHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccch---------hhcchHHHHHHHHHHHHHHHHHc--
Confidence 76643222345566777777777778876 5555666654333211 11234566778888777766542
Q ss_pred hCCCCeEEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHH
Q 046560 245 FLPQAKIVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASP 324 (333)
Q Consensus 245 ~~~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~ 324 (333)
++.++|.+..+.+... . .....+..|++||++++|+++|+.
T Consensus 138 -----~v~~vd~~~~~~~~~~-------~---------------------------~~~~~~~~DgvHp~~~Gy~~~a~~ 178 (183)
T cd04501 138 -----GLLFLDFYSPLLDERN-------V---------------------------GLKPGLLTDGLHPSREGYRVMAPL 178 (183)
T ss_pred -----CCCEEechhhhhcccc-------c---------------------------cccccccCCCCCCCHHHHHHHHHH
Confidence 4778999886554211 0 011244569999999999999999
Q ss_pred HHhc
Q 046560 325 ILQD 328 (333)
Q Consensus 325 ~~~~ 328 (333)
+.+.
T Consensus 179 i~~~ 182 (183)
T cd04501 179 AEKA 182 (183)
T ss_pred HHHh
Confidence 8865
No 10
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.95 E-value=2e-08 Score=88.17 Aligned_cols=195 Identities=12% Similarity=0.051 Sum_probs=108.9
Q ss_pred EEEEcCCCcccCCCCCccchhcccCCCCCCCCCCCCCCcccccCCccHHHHHHHhcCCCCCCCCCCCCCCCCCCcCCccc
Q 046560 29 GIMAFGDSILDTGNNNNLISLIKCNFPPYGQDFIGGKPTGRFCNGKVLTDLIAEGLGVKETVPAYFDPNLQSKDLATGVC 108 (333)
Q Consensus 29 ~l~vFGDSlsD~Gn~~~l~~~~~~~~~Pyg~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~p~yl~~~~~~~~~~~g~N 108 (333)
+|++||||++. |-.. - -.+|++.+..|+..|++.|+-. . + -..-+|
T Consensus 1 ~I~~~GDSiT~-G~~~------------~--------~~~~~~~~~~w~~~L~~~l~~~-~-~-----------~~~viN 46 (208)
T cd01839 1 TILCFGDSNTW-GIIP------------D--------TGGRYPFEDRWPGVLEKALGAN-G-E-----------NVRVIE 46 (208)
T ss_pred CEEEEecCccc-CCCC------------C--------CCCcCCcCCCCHHHHHHHHccC-C-C-----------CeEEEe
Confidence 47899999984 2210 0 0135566789999999998642 1 1 023479
Q ss_pred eeecccccCCCCCCCccccCHHHHHHHHHHHHHHHHHhhChhhHhhhhccceEEEE---eecChh--HHHHHHHHHHHHH
Q 046560 109 FASGGAGLDPLTSSITSVIPISEQLENFREYIRKLEGLVGEEGANKIISNSLFLLL---IKYDIS--TYTSMLVSWTSTI 183 (333)
Q Consensus 109 fA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~aLf~i~---n~~~~~--~~~~~~v~~~~~~ 183 (333)
.+++|.++..... . .....-++.+.+.... ...-.+++|+ ||.... .-.+...+.+.+.
T Consensus 47 ~Gv~G~tt~~~~~-~---~~~~~~l~~l~~~l~~------------~~~pd~vii~lGtND~~~~~~~~~~~~~~~l~~l 110 (208)
T cd01839 47 DGLPGRTTVLDDP-F---FPGRNGLTYLPQALES------------HSPLDLVIIMLGTNDLKSYFNLSAAEIAQGLGAL 110 (208)
T ss_pred cCcCCcceeccCc-c---ccCcchHHHHHHHHHh------------CCCCCEEEEeccccccccccCCCHHHHHHHHHHH
Confidence 9999988532110 0 0111112222222110 0122455554 775311 1123445555555
Q ss_pred HHHHHhc------CceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEeccc
Q 046560 184 IKDLYEV------GVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYVDIY 257 (333)
Q Consensus 184 i~~L~~~------GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 257 (333)
++.+.+. +..++++.+.||+...+... ..+....++....||+.+++..++. ++.++|.+
T Consensus 111 v~~i~~~~~~~~~~~~~iil~~pp~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~ 176 (208)
T cd01839 111 VDIIRTAPIEPGMPAPKILIVAPPPIRTPKGSL-------AGKFAGAEEKSKGLADAYRALAEEL-------GCHFFDAG 176 (208)
T ss_pred HHHHHhccccccCCCCCEEEEeCCccCccccch-------hhhhccHHHHHHHHHHHHHHHHHHh-------CCCEEcHH
Confidence 5555554 46678888888872221111 1123344567778888877766543 35567765
Q ss_pred hhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHHHhccc
Q 046560 258 NPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPILQDLK 330 (333)
Q Consensus 258 ~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~~~ 330 (333)
.++.. ...|++|||+++|++||+.+++.+.
T Consensus 177 ~~~~~-------------------------------------------~~~DGvH~~~~G~~~~a~~l~~~i~ 206 (208)
T cd01839 177 SVGST-------------------------------------------SPVDGVHLDADQHAALGQALASVIR 206 (208)
T ss_pred HHhcc-------------------------------------------CCCCccCcCHHHHHHHHHHHHHHHh
Confidence 43210 1259999999999999999988764
No 11
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.91 E-value=3.9e-08 Score=85.01 Aligned_cols=112 Identities=18% Similarity=0.224 Sum_probs=71.2
Q ss_pred eecChhHHHHHHHHHHHHHHHHHHh-cCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHh
Q 046560 165 IKYDISTYTSMLVSWTSTIIKDLYE-VGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLS 243 (333)
Q Consensus 165 n~~~~~~~~~~~v~~~~~~i~~L~~-~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~ 243 (333)
||.....-.++..+++.+.++++.+ ....+|++.++||++..|.... ......++....+|+.+++..++
T Consensus 78 ND~~~~~~~~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~-------~~~~~~~~~~~~~n~~~~~~a~~-- 148 (191)
T cd01836 78 NDVTHLTSIARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQ-------PLRWLLGRRARLLNRALERLASE-- 148 (191)
T ss_pred cCcCCCCCHHHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcH-------HHHHHHHHHHHHHHHHHHHHHhc--
Confidence 7764322345566777777777766 3456899999999887653221 11233445556667666665543
Q ss_pred hhCCCCeEEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHH
Q 046560 244 SFLPQAKIVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIAS 323 (333)
Q Consensus 244 ~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~ 323 (333)
++ .+.++|++..+. .+++.-|++||++++|+++|+
T Consensus 149 --~~--~~~~id~~~~~~-----------------------------------------~~~~~~DglHpn~~Gy~~~a~ 183 (191)
T cd01836 149 --AP--RVTLLPATGPLF-----------------------------------------PALFASDGFHPSAAGYAVWAE 183 (191)
T ss_pred --CC--CeEEEecCCccc-----------------------------------------hhhccCCCCCCChHHHHHHHH
Confidence 33 456677765431 123335999999999999999
Q ss_pred HHHhccc
Q 046560 324 PILQDLK 330 (333)
Q Consensus 324 ~~~~~~~ 330 (333)
.+.+.+.
T Consensus 184 ~l~~~i~ 190 (191)
T cd01836 184 ALAPAIA 190 (191)
T ss_pred HHHHHHh
Confidence 9988653
No 12
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.85 E-value=2.2e-07 Score=79.54 Aligned_cols=172 Identities=17% Similarity=0.172 Sum_probs=99.2
Q ss_pred EEEEcCCCcccCCCCCccchhcccCCCCCCCCCCCCCCcccccCCccHHHHHHHhcCCCCCCCCCCCCCCCCCCcCCccc
Q 046560 29 GIMAFGDSILDTGNNNNLISLIKCNFPPYGQDFIGGKPTGRFCNGKVLTDLIAEGLGVKETVPAYFDPNLQSKDLATGVC 108 (333)
Q Consensus 29 ~l~vFGDSlsD~Gn~~~l~~~~~~~~~Pyg~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~p~yl~~~~~~~~~~~g~N 108 (333)
+|++||||++.-.... +-+..|+..+++.++++ -+|
T Consensus 1 ~iv~~GDSit~G~g~~--------------------------~~~~~~~~~~~~~~~~~------------------v~N 36 (177)
T cd01844 1 PWVFYGTSISQGACAS--------------------------RPGMAWTAILARRLGLE------------------VIN 36 (177)
T ss_pred CEEEEeCchhcCcCCC--------------------------CCCCcHHHHHHHHhCCC------------------eEE
Confidence 4789999998754311 11348899999988763 269
Q ss_pred eeecccccCCCCCCCccccCHHHHHHHHHHHHHHHHHhhChhhHhhhhccceEEE--E-eecChhHHHHHHHHHHHHHHH
Q 046560 109 FASGGAGLDPLTSSITSVIPISEQLENFREYIRKLEGLVGEEGANKIISNSLFLL--L-IKYDISTYTSMLVSWTSTIIK 185 (333)
Q Consensus 109 fA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~aLf~i--~-n~~~~~~~~~~~v~~~~~~i~ 185 (333)
.+++|++... ..+. +.... ..-.+++| + ||..... +..+++.+.++
T Consensus 37 ~g~~G~~~~~------------~~~~---~~~~~-------------~~pd~vii~~G~ND~~~~~---~~~~~~~~~i~ 85 (177)
T cd01844 37 LGFSGNARLE------------PEVA---ELLRD-------------VPADLYIIDCGPNIVGAEA---MVRERLGPLVK 85 (177)
T ss_pred eeecccccch------------HHHH---HHHHh-------------cCCCEEEEEeccCCCccHH---HHHHHHHHHHH
Confidence 9999986311 0111 11110 11234444 3 7764332 56778888888
Q ss_pred HHHhcCc-eEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEeccchhHHhhh
Q 046560 186 DLYEVGV-RKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYVDIYNPLLDLI 264 (333)
Q Consensus 186 ~L~~~GA-r~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~ 264 (333)
+|.+... .+|++++.||. |...... +..... ...+.++.+.+++++++ ..-++.++|.+.++..
T Consensus 86 ~i~~~~p~~~iil~~~~~~---~~~~~~~-----~~~~~~----~~~~~~~~~~~~~~~~~-~~~~v~~id~~~~~~~-- 150 (177)
T cd01844 86 GLRETHPDTPILLVSPRYC---PDAELTP-----GRGKLT----LAVRRALREAFEKLRAD-GVPNLYYLDGEELLGP-- 150 (177)
T ss_pred HHHHHCcCCCEEEEecCCC---CccccCc-----chhHHH----HHHHHHHHHHHHHHHhc-CCCCEEEecchhhcCC--
Confidence 8887764 46777776664 2211110 112223 33444444444444433 2336788887543311
Q ss_pred cCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHHHhc
Q 046560 265 NNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPILQD 328 (333)
Q Consensus 265 ~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 328 (333)
. .-++.|++|||+++|++||+.+...
T Consensus 151 --~------------------------------------~~~~~DglHpn~~Gy~~~a~~l~~~ 176 (177)
T cd01844 151 --D------------------------------------GEALVDGIHPTDLGHMRYADRFEPV 176 (177)
T ss_pred --C------------------------------------CCCCCCCCCCCHHHHHHHHHHHhhc
Confidence 0 0134599999999999999998764
No 13
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=98.82 E-value=8e-08 Score=83.46 Aligned_cols=28 Identities=25% Similarity=0.342 Sum_probs=23.9
Q ss_pred CceecCCCChhHHHHHHHHHHHHhcccC
Q 046560 304 EFVFWDSAHPSEKAYMIIASPILQDLKK 331 (333)
Q Consensus 304 ~ylfwD~~HPT~~~h~~iA~~~~~~~~~ 331 (333)
+++..|++||++++|+.+|+.+.+.+.+
T Consensus 158 ~~~~~DGiHpn~~Gy~~~A~~i~~~l~~ 185 (191)
T PRK10528 158 QWMQDDGIHPNRDAQPFIADWMAKQLQP 185 (191)
T ss_pred hhcCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 3566799999999999999999987754
No 14
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.81 E-value=1.5e-07 Score=82.56 Aligned_cols=103 Identities=14% Similarity=0.126 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeE
Q 046560 172 YTSMLVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKI 251 (333)
Q Consensus 172 ~~~~~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 251 (333)
.++...+.+...++++.+.|++ +++.++||..-.+.. ... .+..++++.+.+.+.. ...
T Consensus 100 ~~~~~~~~l~~ii~~~~~~~~~-vil~t~~P~~~~~~~-----------~~~----~~~~~~~~n~~~~~~~----~~~- 158 (204)
T cd01830 100 TAEELIAGYRQLIRRAHARGIK-VIGATITPFEGSGYY-----------TPA----REATRQAVNEWIRTSG----AFD- 158 (204)
T ss_pred CHHHHHHHHHHHHHHHHHCCCe-EEEecCCCCCCCCCC-----------CHH----HHHHHHHHHHHHHccC----CCC-
Confidence 4566777888888888888874 777888875432211 111 1223333433333321 111
Q ss_pred EEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHHHh
Q 046560 252 VYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPILQ 327 (333)
Q Consensus 252 ~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 327 (333)
.++|++..+.+... ...-..+|+.+|++||++++|++||+.+..
T Consensus 159 ~~vD~~~~~~~~~~--------------------------------~~~~~~~~~~~DGvHpn~~Gy~~~A~~i~~ 202 (204)
T cd01830 159 AVVDFDAALRDPAD--------------------------------PSRLRPAYDSGDHLHPNDAGYQAMADAVDL 202 (204)
T ss_pred eeeEhHHhhcCCCC--------------------------------chhcccccCCCCCCCCCHHHHHHHHHhcCC
Confidence 24787765433100 000012566789999999999999998754
No 15
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.77 E-value=3.9e-07 Score=82.66 Aligned_cols=124 Identities=13% Similarity=0.056 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHhc-CceEEEEecCCCCCccccccccc-------CCCCCCcchhhhHHHHHHHHHHHHHHHHHhhh
Q 046560 174 SMLVSWTSTIIKDLYEV-GVRKIAIFSTLPLGCLPILRTLH-------GGLMRSCGDDDNKAAELFNSKLLAEMKNLSSF 245 (333)
Q Consensus 174 ~~~v~~~~~~i~~L~~~-GAr~~vv~~lpplg~~P~~~~~~-------~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~ 245 (333)
+...+++...|++|.+. .--+|++++.|++-- .-.... ........+..++....+|+.+++..++.
T Consensus 127 ~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~i~~~a~~~--- 201 (259)
T cd01823 127 DEVGARLKAVLDRIRERAPNARVVVVGYPRLFP--PDGGDCDKSCSPGTPLTPADRPELNQLVDKLNALIRRAAADA--- 201 (259)
T ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEeccccccc--CCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 44556666777777654 334688999887531 100000 00000123455666777777777666544
Q ss_pred CCCCeEEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHH
Q 046560 246 LPQAKIVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPI 325 (333)
Q Consensus 246 ~~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~ 325 (333)
.+.++.++|++..+..- ..|....... .. .+......-|++||++++|+.||+.+
T Consensus 202 -~~~~v~fvD~~~~f~~~-------------~~~~~~~~~~--------~~---~~~~~~~~~d~~HPn~~G~~~~A~~i 256 (259)
T cd01823 202 -GDYKVRFVDTDAPFAGH-------------RACSPDPWSR--------SV---LDLLPTRQGKPFHPNAAGHRAIADLI 256 (259)
T ss_pred -CCceEEEEECCCCcCCC-------------ccccCCCccc--------cc---cCCCCCCCccCCCCCHHHHHHHHHHH
Confidence 22568889998754431 2232111000 00 01123345699999999999999998
Q ss_pred Hh
Q 046560 326 LQ 327 (333)
Q Consensus 326 ~~ 327 (333)
.+
T Consensus 257 ~~ 258 (259)
T cd01823 257 VD 258 (259)
T ss_pred hh
Confidence 75
No 16
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=98.73 E-value=2e-07 Score=80.52 Aligned_cols=111 Identities=14% Similarity=0.157 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHh--cCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCe
Q 046560 173 TSMLVSWTSTIIKDLYE--VGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAK 250 (333)
Q Consensus 173 ~~~~v~~~~~~i~~L~~--~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~ 250 (333)
.+...+.+...|+++.+ .|+ ++++++.||+.......... .........++....||+.+++..++. .
T Consensus 87 ~~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~-------~ 156 (199)
T cd01838 87 LDEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSLE--DGGSQPGRTNELLKQYAEACVEVAEEL-------G 156 (199)
T ss_pred HHHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhhc--cccCCccccHHHHHHHHHHHHHHHHHh-------C
Confidence 34555566666666655 455 57777887765322110000 001123445677788888777665543 3
Q ss_pred EEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHHHhcc
Q 046560 251 IVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPILQDL 329 (333)
Q Consensus 251 i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~~ 329 (333)
+.++|++..+... +. ....++.|++||++++|+++|+.+.+.+
T Consensus 157 ~~~iD~~~~~~~~---~~---------------------------------~~~~~~~Dg~Hpn~~G~~~~a~~l~~~~ 199 (199)
T cd01838 157 VPVIDLWTAMQEE---AG---------------------------------WLESLLTDGLHFSSKGYELLFEEIVKVI 199 (199)
T ss_pred CcEEEHHHHHHhc---cC---------------------------------chhhhcCCCCCcCHhHHHHHHHHHHhhC
Confidence 6678988766531 00 0023346999999999999999998753
No 17
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.73 E-value=2.6e-07 Score=79.37 Aligned_cols=121 Identities=12% Similarity=0.151 Sum_probs=77.5
Q ss_pred ceEEEE---eecCh----hHHHHHHHHHHHHHHHHHH-hcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHH
Q 046560 159 SLFLLL---IKYDI----STYTSMLVSWTSTIIKDLY-EVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAEL 230 (333)
Q Consensus 159 aLf~i~---n~~~~----~~~~~~~v~~~~~~i~~L~-~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~ 230 (333)
.+++|+ ||... ....+...+++.+.|+.+. .....+|++.+.+|....+... .-.+..+.....
T Consensus 63 d~v~l~~G~ND~~~~~~~~~~~~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~~--------~~~~~~~~~~~~ 134 (191)
T cd01834 63 DVVSIMFGINDSFRGFDDPVGLEKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDPL--------PDGAEYNANLAA 134 (191)
T ss_pred CEEEEEeecchHhhcccccccHHHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCCC--------CChHHHHHHHHH
Confidence 455554 66542 1335566777788888874 3334567777766543322100 012455677788
Q ss_pred HHHHHHHHHHHHhhhCCCCeEEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCC
Q 046560 231 FNSKLLAEMKNLSSFLPQAKIVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDS 310 (333)
Q Consensus 231 ~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~ 310 (333)
||+.+++..++. ++.++|++..+.+....+ +..++++|+
T Consensus 135 ~n~~l~~~a~~~-------~~~~iD~~~~~~~~~~~~----------------------------------~~~~~~~D~ 173 (191)
T cd01834 135 YADAVRELAAEN-------GVAFVDLFTPMKEAFQKA----------------------------------GEAVLTVDG 173 (191)
T ss_pred HHHHHHHHHHHc-------CCeEEecHHHHHHHHHhC----------------------------------CCccccCCC
Confidence 888887765432 477899999887643321 124567899
Q ss_pred CChhHHHHHHHHHHHHhc
Q 046560 311 AHPSEKAYMIIASPILQD 328 (333)
Q Consensus 311 ~HPT~~~h~~iA~~~~~~ 328 (333)
+||++++|++||+.+.++
T Consensus 174 ~Hpn~~G~~~~a~~~~~~ 191 (191)
T cd01834 174 VHPNEAGHRALARLWLEA 191 (191)
T ss_pred CCCCHHHHHHHHHHHHhC
Confidence 999999999999999763
No 18
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=98.69 E-value=4.5e-07 Score=78.93 Aligned_cols=110 Identities=11% Similarity=0.044 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEE
Q 046560 173 TSMLVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIV 252 (333)
Q Consensus 173 ~~~~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~ 252 (333)
.+...+++.+.|+++-+.|++-| +++.||... + .. + ...+.....||+.+++..++. .+.
T Consensus 89 ~~~~~~nl~~ii~~~~~~~~~~i-l~tp~~~~~---~----~~----~-~~~~~~~~~~~~~~~~~a~~~-------~~~ 148 (198)
T cd01821 89 YTTYKEYLRRYIAEARAKGATPI-LVTPVTRRT---F----DE----G-GKVEDTLGDYPAAMRELAAEE-------GVP 148 (198)
T ss_pred HHHHHHHHHHHHHHHHHCCCeEE-EECCccccc---c----CC----C-CcccccchhHHHHHHHHHHHh-------CCC
Confidence 46667788888888888888744 455444211 1 00 0 022334567777777766554 366
Q ss_pred EeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHHHhcc
Q 046560 253 YVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPILQDL 329 (333)
Q Consensus 253 ~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~~ 329 (333)
++|++..+.+..+.-.. .... .. . .++..|++||++++|++||+.+++.+
T Consensus 149 ~vD~~~~~~~~~~~~g~---~~~~------------------~~-~-----~~~~~DgvHp~~~G~~~~a~~i~~~~ 198 (198)
T cd01821 149 LIDLNAASRALYEAIGP---EKSK------------------KY-F-----PEGPGDNTHFSEKGADVVARLVAEEL 198 (198)
T ss_pred EEecHHHHHHHHHHhCh---HhHH------------------hh-C-----cCCCCCCCCCCHHHHHHHHHHHHhhC
Confidence 89999988775542110 0000 00 0 24456999999999999999998753
No 19
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=98.69 E-value=3.7e-07 Score=76.67 Aligned_cols=110 Identities=19% Similarity=0.235 Sum_probs=71.5
Q ss_pred ceEEEE---eecCh----hHHHHHHHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHH
Q 046560 159 SLFLLL---IKYDI----STYTSMLVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELF 231 (333)
Q Consensus 159 aLf~i~---n~~~~----~~~~~~~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~ 231 (333)
.+++|. ||... ....+...+.+.+.|+.+...+ +++++.+||..-.+... +.+........+
T Consensus 63 d~vvi~~G~ND~~~~~~~~~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 131 (179)
T PF13472_consen 63 DLVVISFGTNDVLNGDENDTSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRDP---------KQDYLNRRIDRY 131 (179)
T ss_dssp SEEEEE--HHHHCTCTTCHHHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTTT---------HTTCHHHHHHHH
T ss_pred CEEEEEcccccccccccccccHHHHHHHHHHHHHhhcccC--cEEEecCCCcccccccc---------cchhhhhhHHHH
Confidence 355554 66533 2456778888888888888888 88888888765433211 123455667778
Q ss_pred HHHHHHHHHHHhhhCCCCeEEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCC
Q 046560 232 NSKLLAEMKNLSSFLPQAKIVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSA 311 (333)
Q Consensus 232 N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~ 311 (333)
|+.+++..++. .+.++|+...+.+ +. ....++++.|++
T Consensus 132 ~~~~~~~a~~~-------~~~~id~~~~~~~----~~-------------------------------~~~~~~~~~D~~ 169 (179)
T PF13472_consen 132 NQAIRELAKKY-------GVPFIDLFDAFDD----HD-------------------------------GWFPKYYFSDGV 169 (179)
T ss_dssp HHHHHHHHHHC-------TEEEEEHHHHHBT----TT-------------------------------SCBHTCTBTTSS
T ss_pred HHHHHHHHHHc-------CCEEEECHHHHcc----cc-------------------------------ccchhhcCCCCC
Confidence 88777655432 5778999887443 10 011246668999
Q ss_pred ChhHHHHHHH
Q 046560 312 HPSEKAYMII 321 (333)
Q Consensus 312 HPT~~~h~~i 321 (333)
|||+++|++|
T Consensus 170 Hp~~~G~~~~ 179 (179)
T PF13472_consen 170 HPNPAGHQLI 179 (179)
T ss_dssp SBBHHHHHHH
T ss_pred CcCHHHhCcC
Confidence 9999999986
No 20
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=98.69 E-value=2.8e-07 Score=81.38 Aligned_cols=114 Identities=18% Similarity=0.194 Sum_probs=70.2
Q ss_pred eecChhHHHHHHHHHHHHHHHHHHhcC-ceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHh
Q 046560 165 IKYDISTYTSMLVSWTSTIIKDLYEVG-VRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLS 243 (333)
Q Consensus 165 n~~~~~~~~~~~v~~~~~~i~~L~~~G-Ar~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~ 243 (333)
||.....-.+.+.+++.+.|+++.+.. -.+|++++++|.+..| ..+.+....+|+.+++...
T Consensus 100 ND~~~~~~~~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~--------------~~~~~~~~~~n~~l~~~~~--- 162 (214)
T cd01820 100 NNIGHTTTAEEIAEGILAIVEEIREKLPNAKILLLGLLPRGQNP--------------NPLRERNAQVNRLLAVRYD--- 162 (214)
T ss_pred cccCCCCCHHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCc--------------hhHHHHHHHHHHHHHHHhc---
Confidence 776432234456677777777776653 3468888888765321 1223445677777665432
Q ss_pred hhCCCCeEEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHH
Q 046560 244 SFLPQAKIVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIAS 323 (333)
Q Consensus 244 ~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~ 323 (333)
+ ...+.++|++..+.+- . | ...+.++.|++||++++|+++|+
T Consensus 163 -~--~~~v~~vd~~~~~~~~---~---------------g-----------------~~~~~~~~DGlHpn~~Gy~~~a~ 204 (214)
T cd01820 163 -G--LPNVTFLDIDKGFVQS---D---------------G-----------------TISHHDMPDYLHLTAAGYRKWAD 204 (214)
T ss_pred -C--CCCEEEEeCchhhccc---C---------------C-----------------CcCHhhcCCCCCCCHHHHHHHHH
Confidence 1 1257788987654310 0 0 01122347999999999999999
Q ss_pred HHHhcccCCC
Q 046560 324 PILQDLKKNF 333 (333)
Q Consensus 324 ~~~~~~~~~~ 333 (333)
.+.+.+.+.|
T Consensus 205 ~l~~~l~~~~ 214 (214)
T cd01820 205 ALHPTLARLL 214 (214)
T ss_pred HHHHHHHhhC
Confidence 9998876543
No 21
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=98.66 E-value=3.1e-06 Score=78.25 Aligned_cols=253 Identities=16% Similarity=0.106 Sum_probs=127.7
Q ss_pred CCccEEEEcCCCcccCCCCCccchhcccCCCCC-CCCCCCCCCcccccCCccHHHHHHHhcCCCCCCCCCCCCCCCCCCc
Q 046560 25 EKLLGIMAFGDSILDTGNNNNLISLIKCNFPPY-GQDFIGGKPTGRFCNGKVLTDLIAEGLGVKETVPAYFDPNLQSKDL 103 (333)
Q Consensus 25 ~~~~~l~vFGDSlsD~Gn~~~l~~~~~~~~~Py-g~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~p~yl~~~~~~~~~ 103 (333)
..|+-|-.+|||++ .||..-..... ...-.| |.+|..+ -.+.+.+=.+.+.+|-+. + +-+.-|..........
T Consensus 8 ~DI~viaA~GDSlt-ag~ga~~~~~~-~~~~e~rG~s~~~G-g~~~~~~~~Tlpnil~~f-n--p~l~G~s~~~~~~~~~ 81 (288)
T cd01824 8 GDIKVIAALGDSLT-AGNGAGSANNL-DLLTEYRGLSWSIG-GDSTLRGLTTLPNILREF-N--PSLYGYSVGTGDETLP 81 (288)
T ss_pred ccCeEEeecccccc-ccCCCCCCCcc-ccccccCCceEecC-CcccccccccHHHHHHHh-C--CCcccccCCCCCCCCc
Confidence 57899999999998 44432100000 000001 2233111 111222334555655543 2 1111111110001122
Q ss_pred CCccceeecccccCCCCCCCccccCHHHHHHHHHHHHHHHHHhhChhhHhhhh-ccceEEE--E-eecCh------hHHH
Q 046560 104 ATGVCFASGGAGLDPLTSSITSVIPISEQLENFREYIRKLEGLVGEEGANKII-SNSLFLL--L-IKYDI------STYT 173 (333)
Q Consensus 104 ~~g~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~-~~aLf~i--~-n~~~~------~~~~ 173 (333)
....|.|+.|+++. +|..|++...+..++ . .. .+.- .-.|.+| + ||.-. ....
T Consensus 82 ~~~~N~av~Ga~s~----------dL~~qa~~lv~r~~~---~-~~---i~~~~dwklVtI~IG~ND~c~~~~~~~~~~~ 144 (288)
T cd01824 82 DSGFNVAEPGAKSE----------DLPQQARLLVRRMKK---D-PR---VDFKNDWKLITIFIGGNDLCSLCEDANPGSP 144 (288)
T ss_pred ccceeecccCcchh----------hHHHHHHHHHHHHhh---c-cc---cccccCCcEEEEEecchhHhhhcccccCcCH
Confidence 35679999999853 477888765433221 0 00 0110 1123333 3 66421 1234
Q ss_pred HHHHHHHHHHHHHHHhcCce-EEEEecCCCCCcccccccccCC----CCCCcc----------hhhhHHHHHHHHHHHHH
Q 046560 174 SMLVSWTSTIIKDLYEVGVR-KIAIFSTLPLGCLPILRTLHGG----LMRSCG----------DDDNKAAELFNSKLLAE 238 (333)
Q Consensus 174 ~~~v~~~~~~i~~L~~~GAr-~~vv~~lpplg~~P~~~~~~~~----~~~~c~----------~~~~~~~~~~N~~L~~~ 238 (333)
....+++.+.++.|.+..-| .++++++|++..++........ ....|. +.+.++...|++.+++.
T Consensus 145 ~~~~~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~~p~~c~~~~~~~C~c~~~~~~~~~~~~~~~~~~y~~~~~ei 224 (288)
T cd01824 145 QTFVKNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTKKPLQCETLLAPECPCLLGPTENSYQDLKKFYKEYQNEVEEI 224 (288)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhccCCccccccCCCcCCCcCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 56677888888888887755 5777778877655543211000 011232 35667778888887777
Q ss_pred HHHHhhhCCCCeEEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHH
Q 046560 239 MKNLSSFLPQAKIVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAY 318 (333)
Q Consensus 239 l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h 318 (333)
.++-+-+..+..+++ ..++.+.+..+.. ...+ .+++-||.+||++++|
T Consensus 225 a~~~~~~~~~f~vv~---qPf~~~~~~~~~~----------------------------~g~d-~~~~~~D~~Hps~~G~ 272 (288)
T cd01824 225 VESGEFDREDFAVVV---QPFFEDTSLPPLP----------------------------DGPD-LSFFSPDCFHFSQRGH 272 (288)
T ss_pred HhcccccccCccEEe---eCchhcccccccc----------------------------CCCc-chhcCCCCCCCCHHHH
Confidence 665332223344444 2222222111000 0011 2688899999999999
Q ss_pred HHHHHHHHhcccCC
Q 046560 319 MIIASPILQDLKKN 332 (333)
Q Consensus 319 ~~iA~~~~~~~~~~ 332 (333)
.++|+.++..+++.
T Consensus 273 ~~ia~~lwn~m~~p 286 (288)
T cd01824 273 AIAANALWNNLLEP 286 (288)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999988764
No 22
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.65 E-value=7.7e-07 Score=76.57 Aligned_cols=113 Identities=18% Similarity=0.173 Sum_probs=64.4
Q ss_pred ceEEEE---eecChh--HHHHHHHHHHHHHHHHHHhcCc-eEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHH
Q 046560 159 SLFLLL---IKYDIS--TYTSMLVSWTSTIIKDLYEVGV-RKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFN 232 (333)
Q Consensus 159 aLf~i~---n~~~~~--~~~~~~v~~~~~~i~~L~~~GA-r~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N 232 (333)
.+.+|. ||.... ...+...+++.+.|+++.+.+. .++++.+.||...... +. ...+.....+|
T Consensus 69 d~Vii~~G~ND~~~~~~~~~~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~~~~~----------~~-~~~~~~~~~~~ 137 (188)
T cd01827 69 NIVIIKLGTNDAKPQNWKYKDDFKKDYETMIDSFQALPSKPKIYICYPIPAYYGDG----------GF-INDNIIKKEIQ 137 (188)
T ss_pred CEEEEEcccCCCCCCCCccHHHHHHHHHHHHHHHHHHCCCCeEEEEeCCcccccCC----------Cc-cchHHHHHHHH
Confidence 455554 775321 1234445667777777766653 4777777766532110 11 11223445566
Q ss_pred HHHHHHHHHHhhhCCCCeEEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCC
Q 046560 233 SKLLAEMKNLSSFLPQAKIVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAH 312 (333)
Q Consensus 233 ~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~H 312 (333)
+.+++..++ -.+.++|++..+.. + + .+.-|++|
T Consensus 138 ~~~~~~a~~-------~~~~~vD~~~~~~~---~-----------------------------------~--~~~~Dg~H 170 (188)
T cd01827 138 PMIDKIAKK-------LNLKLIDLHTPLKG---K-----------------------------------P--ELVPDWVH 170 (188)
T ss_pred HHHHHHHHH-------cCCcEEEccccccC---C-----------------------------------c--cccCCCCC
Confidence 665554433 23556787753311 0 0 12349999
Q ss_pred hhHHHHHHHHHHHHhcc
Q 046560 313 PSEKAYMIIASPILQDL 329 (333)
Q Consensus 313 PT~~~h~~iA~~~~~~~ 329 (333)
|++++|++||+.+.+.+
T Consensus 171 pn~~G~~~~A~~i~~~i 187 (188)
T cd01827 171 PNEKGAYILAKVVYKAI 187 (188)
T ss_pred cCHHHHHHHHHHHHHHh
Confidence 99999999999998875
No 23
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.57 E-value=3.3e-07 Score=78.73 Aligned_cols=111 Identities=14% Similarity=0.016 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHHHhc-CceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeE
Q 046560 173 TSMLVSWTSTIIKDLYEV-GVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKI 251 (333)
Q Consensus 173 ~~~~v~~~~~~i~~L~~~-GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 251 (333)
.+...+++...|+++.+. .-.+|++++.||....+.. +....+.....+|+.+++..++ + + +
T Consensus 76 ~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~a~~----~-~--v 138 (189)
T cd01825 76 ASEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTGA----------GRWRTPPGLDAVIAAQRRVAKE----E-G--I 138 (189)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCCC----------CCcccCCcHHHHHHHHHHHHHH----c-C--C
Confidence 345567777777777664 4556777777765332210 1111223345666666665433 2 2 6
Q ss_pred EEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHHHhcccC
Q 046560 252 VYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPILQDLKK 331 (333)
Q Consensus 252 ~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~~~~ 331 (333)
.++|++..+.+. | +. .......++..|++||++++|++||+.+.+.+.+
T Consensus 139 ~~vd~~~~~~~~---------------~-~~---------------~~~~~~~~~~~Dg~Hp~~~G~~~~a~~i~~~i~~ 187 (189)
T cd01825 139 AFWDLYAAMGGE---------------G-GI---------------WQWAEPGLARKDYVHLTPRGYERLANLLYEALLK 187 (189)
T ss_pred eEEeHHHHhCCc---------------c-hh---------------hHhhcccccCCCcccCCcchHHHHHHHHHHHHHh
Confidence 788988765321 1 00 0111224566799999999999999999988764
No 24
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=98.55 E-value=2.5e-06 Score=72.39 Aligned_cols=25 Identities=28% Similarity=0.397 Sum_probs=21.6
Q ss_pred ceecCCCChhHHHHHHHHHHHHhcc
Q 046560 305 FVFWDSAHPSEKAYMIIASPILQDL 329 (333)
Q Consensus 305 ylfwD~~HPT~~~h~~iA~~~~~~~ 329 (333)
++.-|++||++++|++||+.+.+.+
T Consensus 152 ~~~~DgvHpn~~G~~~~a~~i~~~i 176 (177)
T cd01822 152 LMQSDGIHPNAEGQPIIAENVWPAL 176 (177)
T ss_pred hhCCCCCCcCHHHHHHHHHHHHHhh
Confidence 3456999999999999999998765
No 25
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.47 E-value=8.1e-06 Score=70.58 Aligned_cols=79 Identities=18% Similarity=0.277 Sum_probs=48.9
Q ss_pred EEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEeccchhHHhhhcCCCCCCCc
Q 046560 194 KIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYVDIYNPLLDLINNPVKSGFS 273 (333)
Q Consensus 194 ~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~ 273 (333)
+++++++||..... ....+.....+|+.+++..++. .+.++|++..+.+. +.
T Consensus 113 ~vi~~~~~p~~~~~-------------~~~~~~~~~~~n~~~~~~a~~~-------~~~~vd~~~~~~~~---~~----- 164 (193)
T cd01835 113 PVLVVGPTPVDEAK-------------MPYSNRRIARLETAFAEVCLRR-------DVPFLDTFTPLLNH---PQ----- 164 (193)
T ss_pred cEEEEeCCCccccc-------------cchhhHHHHHHHHHHHHHHHHc-------CCCeEeCccchhcC---cH-----
Confidence 47777777654211 0123455677777777665542 35688888765541 10
Q ss_pred cCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHHHh
Q 046560 274 VPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPILQ 327 (333)
Q Consensus 274 n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 327 (333)
. ..+++..|++||++++|++||+.+..
T Consensus 165 -~--------------------------~~~~~~~Dg~Hpn~~G~~~~a~~~~~ 191 (193)
T cd01835 165 -W--------------------------RRELAATDGIHPNAAGYGWLAWLVLH 191 (193)
T ss_pred -H--------------------------HHhhhccCCCCCCHHHHHHHHHHHhc
Confidence 0 00133359999999999999999864
No 26
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=98.39 E-value=1.1e-05 Score=68.30 Aligned_cols=23 Identities=22% Similarity=0.193 Sum_probs=20.8
Q ss_pred ecCCCChhHHHHHHHHHHHHhcc
Q 046560 307 FWDSAHPSEKAYMIIASPILQDL 329 (333)
Q Consensus 307 fwD~~HPT~~~h~~iA~~~~~~~ 329 (333)
+.|++||++++|++||+.+++.+
T Consensus 146 ~~DgiHPn~~G~~~iA~~l~~~i 168 (169)
T cd01831 146 IGCDWHPTVAGHQKIAKHLLPAI 168 (169)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHh
Confidence 46999999999999999998765
No 27
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.33 E-value=6.3e-06 Score=68.73 Aligned_cols=115 Identities=16% Similarity=0.084 Sum_probs=75.6
Q ss_pred cceEEEE---eecChh--HHHHHHHHHHHHHHHHHHh-cCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHH
Q 046560 158 NSLFLLL---IKYDIS--TYTSMLVSWTSTIIKDLYE-VGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELF 231 (333)
Q Consensus 158 ~aLf~i~---n~~~~~--~~~~~~v~~~~~~i~~L~~-~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~ 231 (333)
-.++++. ||.... .......+.+.+.++.+.+ ....+|++++.|+....|. ..+.....+
T Consensus 66 ~d~vil~~G~ND~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~--------------~~~~~~~~~ 131 (187)
T cd00229 66 PDLVIIELGTNDLGRGGDTSIDEFKANLEELLDALRERAPGAKVILITPPPPPPREG--------------LLGRALPRY 131 (187)
T ss_pred CCEEEEEecccccccccccCHHHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCch--------------hhHHHHHHH
Confidence 3455554 665321 1234455566666666664 4567888888888776664 223445677
Q ss_pred HHHHHHHHHHHhhhCCCCeEEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCC
Q 046560 232 NSKLLAEMKNLSSFLPQAKIVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSA 311 (333)
Q Consensus 232 N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~ 311 (333)
|+.+++..++.... ..+.++|++..+... +..+++||++
T Consensus 132 ~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~--------------------------------------~~~~~~~Dg~ 170 (187)
T cd00229 132 NEAIKAVAAENPAP---SGVDLVDLAALLGDE--------------------------------------DKSLYSPDGI 170 (187)
T ss_pred HHHHHHHHHHcCCC---cceEEEEhhhhhCCC--------------------------------------ccccccCCCC
Confidence 88888777666432 346677777654432 2357889999
Q ss_pred ChhHHHHHHHHHHHHh
Q 046560 312 HPSEKAYMIIASPILQ 327 (333)
Q Consensus 312 HPT~~~h~~iA~~~~~ 327 (333)
|||+++|+++|+.+++
T Consensus 171 H~~~~G~~~~a~~i~~ 186 (187)
T cd00229 171 HPNPAGHKLIAEALAS 186 (187)
T ss_pred CCchhhHHHHHHHHhc
Confidence 9999999999999875
No 28
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.28 E-value=1.1e-05 Score=67.39 Aligned_cols=106 Identities=15% Similarity=0.222 Sum_probs=72.5
Q ss_pred eecChhHHHHHHHHHHHHHHHHHHhcCc-eEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHh
Q 046560 165 IKYDISTYTSMLVSWTSTIIKDLYEVGV-RKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLS 243 (333)
Q Consensus 165 n~~~~~~~~~~~v~~~~~~i~~L~~~GA-r~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~ 243 (333)
||.....-.+...+++.+.|+++.+... -+|++.++||....+ .+.....||+.+++.+++.+
T Consensus 51 ND~~~~~~~~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~~----------------~~~~~~~~n~~l~~~~~~~~ 114 (157)
T cd01833 51 NDLVLNRDPDTAPDRLRALIDQMRAANPDVKIIVATLIPTTDAS----------------GNARIAEYNAAIPGVVADLR 114 (157)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCcc----------------hhHHHHHHHHHHHHHHHHHh
Confidence 7753322234566777777777776643 246666666542211 15677899999999998876
Q ss_pred hhCCCCeEEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHH
Q 046560 244 SFLPQAKIVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIAS 323 (333)
Q Consensus 244 ~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~ 323 (333)
.. +..+.++|++..+.+ +++.+|++||++++|+.||+
T Consensus 115 ~~--~~~v~~vd~~~~~~~-----------------------------------------~~~~~Dg~Hpn~~Gy~~~a~ 151 (157)
T cd01833 115 TA--GSPVVLVDMSTGYTT-----------------------------------------ADDLYDGLHPNDQGYKKMAD 151 (157)
T ss_pred cC--CCCEEEEecCCCCCC-----------------------------------------cccccCCCCCchHHHHHHHH
Confidence 53 567888898764421 23457999999999999999
Q ss_pred HHHhcc
Q 046560 324 PILQDL 329 (333)
Q Consensus 324 ~~~~~~ 329 (333)
.+++++
T Consensus 152 ~~~~~~ 157 (157)
T cd01833 152 AWYEAL 157 (157)
T ss_pred HHHhhC
Confidence 998763
No 29
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=98.25 E-value=2.9e-05 Score=65.85 Aligned_cols=110 Identities=19% Similarity=0.256 Sum_probs=71.6
Q ss_pred eecChhHHHHHHHHHHHHHHHHHHhc-CceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHh
Q 046560 165 IKYDISTYTSMLVSWTSTIIKDLYEV-GVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLS 243 (333)
Q Consensus 165 n~~~~~~~~~~~v~~~~~~i~~L~~~-GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~ 243 (333)
||.....-.+...+++.+.++++.+. ...+++++++||..-.+. +....++....||+.+++..++.
T Consensus 62 ND~~~~~~~~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~-----------~~~~~~~~~~~~n~~l~~~a~~~- 129 (174)
T cd01841 62 NDIGKEVSSNQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDE-----------IKTRSNTRIQRLNDAIKELAPEL- 129 (174)
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCcccc-----------cccCCHHHHHHHHHHHHHHHHHC-
Confidence 77543223445667777777777665 356788889887643221 12234566788999888765543
Q ss_pred hhCCCCeEEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHH
Q 046560 244 SFLPQAKIVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIAS 323 (333)
Q Consensus 244 ~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~ 323 (333)
.+.++|++..+.+-. + ...+.+..|++||++++|+++|+
T Consensus 130 ------~~~~id~~~~~~~~~------------------~-----------------~~~~~~~~DglH~n~~Gy~~~a~ 168 (174)
T cd01841 130 ------GVTFIDLNDVLVDEF------------------G-----------------NLKKEYTTDGLHFNPKGYQKLLE 168 (174)
T ss_pred ------CCEEEEcHHHHcCCC------------------C-----------------CccccccCCCcccCHHHHHHHHH
Confidence 367889988653210 0 00124457999999999999999
Q ss_pred HHHh
Q 046560 324 PILQ 327 (333)
Q Consensus 324 ~~~~ 327 (333)
.+.+
T Consensus 169 ~l~~ 172 (174)
T cd01841 169 ILEE 172 (174)
T ss_pred HHHh
Confidence 9865
No 30
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.11 E-value=3.3e-05 Score=65.22 Aligned_cols=108 Identities=21% Similarity=0.286 Sum_probs=68.4
Q ss_pred eecChhHHHHHHHHHHHHHHHHHHh--cCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHH
Q 046560 165 IKYDISTYTSMLVSWTSTIIKDLYE--VGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNL 242 (333)
Q Consensus 165 n~~~~~~~~~~~v~~~~~~i~~L~~--~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l 242 (333)
||.....-.+...+.+.+.|+.+.+ .++ +|++.++||.+ + .....+..+..+|+.+++..++
T Consensus 59 ND~~~~~~~~~~~~~l~~li~~~~~~~~~~-~vi~~~~~p~~--~------------~~~~~~~~~~~~n~~l~~~a~~- 122 (169)
T cd01828 59 NDLAQGTSDEDIVANYRTILEKLRKHFPNI-KIVVQSILPVG--E------------LKSIPNEQIEELNRQLAQLAQQ- 122 (169)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-eEEEEecCCcC--c------------cCcCCHHHHHHHHHHHHHHHHH-
Confidence 7653222234556666777777766 454 58888888765 1 0122345667899988876652
Q ss_pred hhhCCCCeEEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHH
Q 046560 243 SSFLPQAKIVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIA 322 (333)
Q Consensus 243 ~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA 322 (333)
. ++.++|++..+.+- . | +..+++.+|++||++++|+++|
T Consensus 123 ----~--~~~~id~~~~~~~~----~--~-----------------------------~~~~~~~~DgiHpn~~G~~~~a 161 (169)
T cd01828 123 ----E--GVTFLDLWAVFTNA----D--G-----------------------------DLKNEFTTDGLHLNAKGYAVWA 161 (169)
T ss_pred ----C--CCEEEechhhhcCC----C--C-----------------------------CcchhhccCccccCHHHHHHHH
Confidence 2 45677887654220 0 0 0123566799999999999999
Q ss_pred HHHHhcc
Q 046560 323 SPILQDL 329 (333)
Q Consensus 323 ~~~~~~~ 329 (333)
+.+.+.+
T Consensus 162 ~~i~~~~ 168 (169)
T cd01828 162 AALQPYL 168 (169)
T ss_pred HHHHHhh
Confidence 9998754
No 31
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.04 E-value=4.2e-05 Score=66.35 Aligned_cols=112 Identities=10% Similarity=0.039 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCe
Q 046560 171 TYTSMLVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAK 250 (333)
Q Consensus 171 ~~~~~~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~ 250 (333)
++.+...+++...++++-+.|++ +++++.||+.- ...++....+|+.+++..++ . .
T Consensus 88 ~~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~----------------~~~~~~~~~~~~~~~~~a~~----~---~ 143 (200)
T cd01829 88 EWEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRS----------------PKLSADMVYLNSLYREEVAK----A---G 143 (200)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCC----------------hhHhHHHHHHHHHHHHHHHH----c---C
Confidence 34455666777777777666776 77777777531 11234556777776665543 2 3
Q ss_pred EEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHHHhccc
Q 046560 251 IVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPILQDLK 330 (333)
Q Consensus 251 i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~~~ 330 (333)
+.++|++..+.+ ...|+... ......++..++..|++|||+++|+++|+.+.+.++
T Consensus 144 ~~~id~~~~~~~-------------~~~~~~~~-----------~~~~~~~~~~~~~~DgvH~~~~G~~~~a~~i~~~l~ 199 (200)
T cd01829 144 GEFVDVWDGFVD-------------ENGRFTYS-----------GTDVNGKKVRLRTNDGIHFTAAGGRKLAFYVEKLIR 199 (200)
T ss_pred CEEEEhhHhhcC-------------CCCCeeee-----------ccCCCCcEEEeecCCCceECHHHHHHHHHHHHHHhh
Confidence 678899876532 01122110 000112233566679999999999999999998764
No 32
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.01 E-value=0.0002 Score=60.59 Aligned_cols=109 Identities=17% Similarity=0.174 Sum_probs=66.3
Q ss_pred eecChhHHHHHHHHHHHHHHHHHHhcCc-eEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHh
Q 046560 165 IKYDISTYTSMLVSWTSTIIKDLYEVGV-RKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLS 243 (333)
Q Consensus 165 n~~~~~~~~~~~v~~~~~~i~~L~~~GA-r~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~ 243 (333)
||.....-.+...+++.+.++++.+.+. .+++++++||. |. . +..+.....+|+.+++..++
T Consensus 61 ND~~~~~~~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~---~~--~----------~~~~~~~~~~n~~~~~~a~~-- 123 (171)
T cd04502 61 NDLASGRTPEEVLRDFRELVNRIRAKLPDTPIAIISIKPS---PA--R----------WALRPKIRRFNALLKELAET-- 123 (171)
T ss_pred CcccCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEEecCC---Cc--c----------hhhHHHHHHHHHHHHHHHhc--
Confidence 7753322255667777888888877653 35666666542 11 0 11233456777776666432
Q ss_pred hhCCCCeEEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHH
Q 046560 244 SFLPQAKIVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIAS 323 (333)
Q Consensus 244 ~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~ 323 (333)
. -.+.++|++..+.+.-. ....+++..|++||++++|+++|+
T Consensus 124 --~--~~v~~vD~~~~~~~~~~----------------------------------~~~~~~~~~DGlH~n~~Gy~~~a~ 165 (171)
T cd04502 124 --R--PNLTYIDVASPMLDADG----------------------------------KPRAELFQEDGLHLNDAGYALWRK 165 (171)
T ss_pred --C--CCeEEEECcHHHhCCCC----------------------------------CcChhhcCCCCCCCCHHHHHHHHH
Confidence 1 24678898875542100 001245667999999999999999
Q ss_pred HHHhc
Q 046560 324 PILQD 328 (333)
Q Consensus 324 ~~~~~ 328 (333)
.+...
T Consensus 166 ~l~~~ 170 (171)
T cd04502 166 VIKPA 170 (171)
T ss_pred HHHhh
Confidence 98754
No 33
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=97.80 E-value=0.00019 Score=61.18 Aligned_cols=172 Identities=19% Similarity=0.265 Sum_probs=78.6
Q ss_pred cEEEEcCCCcccCCCCCccchhcccCCCCCCCCCCCCCCcccccCCccHHHHHHHhcCCCCCCCCCCCCCCCCCCcCCcc
Q 046560 28 LGIMAFGDSILDTGNNNNLISLIKCNFPPYGQDFIGGKPTGRFCNGKVLTDLIAEGLGVKETVPAYFDPNLQSKDLATGV 107 (333)
Q Consensus 28 ~~l~vFGDSlsD~Gn~~~l~~~~~~~~~Pyg~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~p~yl~~~~~~~~~~~g~ 107 (333)
+++++.|+|.+.-+... +-|..|+-.+++.+|++ -+
T Consensus 2 k~~v~YGsSItqG~~As--------------------------rpg~~~~~~~aR~l~~~------------------~i 37 (178)
T PF14606_consen 2 KRWVAYGSSITQGACAS--------------------------RPGMAYPAILARRLGLD------------------VI 37 (178)
T ss_dssp -EEEEEE-TT-TTTT-S--------------------------SGGGSHHHHHHHHHT-E------------------EE
T ss_pred CeEEEECChhhcCCCCC--------------------------CCcccHHHHHHHHcCCC------------------eE
Confidence 46888898888766521 12679999999999985 27
Q ss_pred ceeecccccCCCCCCCccccCHHHHHHHHHHHHHHHHHhhChhhHhhhhccceEEEE---eecChhHHHHHHHHHHHHHH
Q 046560 108 CFASGGAGLDPLTSSITSVIPISEQLENFREYIRKLEGLVGEEGANKIISNSLFLLL---IKYDISTYTSMLVSWTSTII 184 (333)
Q Consensus 108 NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~aLf~i~---n~~~~~~~~~~~v~~~~~~i 184 (333)
|.+++|++- ++..+..+.+. .+.++|++. | ++++++ .+++...|
T Consensus 38 NLGfsG~~~------------le~~~a~~ia~----------------~~a~~~~ld~~~N-~~~~~~----~~~~~~fv 84 (178)
T PF14606_consen 38 NLGFSGNGK------------LEPEVADLIAE----------------IDADLIVLDCGPN-MSPEEF----RERLDGFV 84 (178)
T ss_dssp EEE-TCCCS--------------HHHHHHHHH----------------S--SEEEEEESHH-CCTTTH----HHHHHHHH
T ss_pred eeeecCccc------------cCHHHHHHHhc----------------CCCCEEEEEeecC-CCHHHH----HHHHHHHH
Confidence 999999873 44555544432 133788875 4 444444 44555666
Q ss_pred HHHHhcC-ceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEeccchhHHhh
Q 046560 185 KDLYEVG-VRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYVDIYNPLLDL 263 (333)
Q Consensus 185 ~~L~~~G-Ar~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i 263 (333)
+.|-+.= -.-|++....+- |. .............+|+.+++.+++++++ .+-++.|+|-..++.+
T Consensus 85 ~~iR~~hP~tPIllv~~~~~---~~---------~~~~~~~~~~~~~~~~~~r~~v~~l~~~-g~~nl~~l~g~~llg~- 150 (178)
T PF14606_consen 85 KTIREAHPDTPILLVSPIPY---PA---------GYFDNSRGETVEEFREALREAVEQLRKE-GDKNLYYLDGEELLGD- 150 (178)
T ss_dssp HHHHTT-SSS-EEEEE-------TT---------TTS--TTS--HHHHHHHHHHHHHHHHHT-T-TTEEEE-HHHCS---
T ss_pred HHHHHhCCCCCEEEEecCCc---cc---------cccCchHHHHHHHHHHHHHHHHHHHHHc-CCCcEEEeCchhhcCc-
Confidence 6665543 455666553221 11 1122333456789999999999999764 3456777765543211
Q ss_pred hcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHHHhcc
Q 046560 264 INNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPILQDL 329 (333)
Q Consensus 264 ~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~~ 329 (333)
. .-..-|++|||..+|..+|+.+...+
T Consensus 151 ---------d------------------------------~e~tvDgvHP~DlG~~~~a~~l~~~i 177 (178)
T PF14606_consen 151 ---------D------------------------------HEATVDGVHPNDLGMMRMADALEPVI 177 (178)
T ss_dssp ------------------------------------------------------------------
T ss_pred ---------c------------------------------cccccccccccccccccccccccccC
Confidence 0 01124999999999999999886543
No 34
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=97.62 E-value=0.00054 Score=59.64 Aligned_cols=100 Identities=16% Similarity=0.204 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHhcCce-EEEEecCC-CCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeE
Q 046560 174 SMLVSWTSTIIKDLYEVGVR-KIAIFSTL-PLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKI 251 (333)
Q Consensus 174 ~~~v~~~~~~i~~L~~~GAr-~~vv~~lp-plg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 251 (333)
+....++.+.|+++.+.+.+ +|+|++++ |.. ... .-....++.+..||+.+++..++. .++
T Consensus 102 ~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~p~~-----~~~------~~~~~~~~~~~~~n~~~~~~a~~~------~~v 164 (204)
T cd04506 102 ETYQNNLKKIFKEIRKLNPDAPIFLVGLYNPFY-----VYF------PNITEINDIVNDWNEASQKLASQY------KNA 164 (204)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEecCCccc-----ccc------chHHHHHHHHHHHHHHHHHHHHhC------CCe
Confidence 44566777777777776533 56676653 321 100 011235678888998877765432 247
Q ss_pred EEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHHHh
Q 046560 252 VYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPILQ 327 (333)
Q Consensus 252 ~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 327 (333)
.++|++..+..-- +..++..|++||++++|++||+.+++
T Consensus 165 ~~vd~~~~~~~~~-------------------------------------~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 203 (204)
T cd04506 165 YFVPIFDLFSDGQ-------------------------------------NKYLLTSDHFHPNDKGYQLIADRVFK 203 (204)
T ss_pred EEEehHHhhcCCc-------------------------------------ccccccccCcCCCHHHHHHHHHHHHh
Confidence 7888887554210 11245569999999999999999876
No 35
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=97.22 E-value=0.0094 Score=52.24 Aligned_cols=24 Identities=33% Similarity=0.511 Sum_probs=21.8
Q ss_pred cCCCChhHHHHHHHHHHHHhcccC
Q 046560 308 WDSAHPSEKAYMIIASPILQDLKK 331 (333)
Q Consensus 308 wD~~HPT~~~h~~iA~~~~~~~~~ 331 (333)
+|++||+.++|+.+|+.+.+.+.+
T Consensus 187 ~Dg~H~n~~Gy~~~a~~l~~~l~~ 210 (216)
T COG2755 187 EDGLHPNAKGYQALAEALAEVLAK 210 (216)
T ss_pred CCCCCcCHhhHHHHHHHHHHHHHH
Confidence 899999999999999999987653
No 36
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=97.07 E-value=0.0041 Score=57.28 Aligned_cols=125 Identities=14% Similarity=0.152 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHHHHhcCce--EEEEecCCCCCcc---------ccc-----ccccC-CC------CCCcc------hh
Q 046560 173 TSMLVSWTSTIIKDLYEVGVR--KIAIFSTLPLGCL---------PIL-----RTLHG-GL------MRSCG------DD 223 (333)
Q Consensus 173 ~~~~v~~~~~~i~~L~~~GAr--~~vv~~lpplg~~---------P~~-----~~~~~-~~------~~~c~------~~ 223 (333)
+++--+++.+.++.|.+...+ +|++.++|++..+ |.. .+... .+ -..|. +.
T Consensus 148 ~eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~~~L~~~~~~r~hplg~~~~~vty~~~y~~lncl~~spC~gw~~~n~t 227 (305)
T cd01826 148 PEEFYENVMEALKYLDTKLPNGSHVILVGLVDGRILYDTLHNRLHPIGQLNKDVTYPNLYDYLNCLQVSPCWGWLNSNET 227 (305)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEEEEeccchhhhhhhhccccccchhcccccchhhhhhhhcccccCCcccccccccc
Confidence 455677788888888888755 8999999994222 000 00000 00 01342 34
Q ss_pred hhHHHHHHHHHHHHHHHHHhhh--CCCCeEEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCC
Q 046560 224 DNKAAELFNSKLLAEMKNLSSF--LPQAKIVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDN 301 (333)
Q Consensus 224 ~~~~~~~~N~~L~~~l~~l~~~--~~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~ 301 (333)
..+++..+=++|..+..++.++ +....+++.|.. +..+.. .+-..| ..
T Consensus 228 ~rn~t~~~a~~l~~~~~~ia~~~~f~nF~v~~~~f~--l~~v~~------------~~~~~g----------------~~ 277 (305)
T cd01826 228 LRNLTSERAAQLSNVLKRIAANETFNNFDVHYIDFP--IQQIVD------------MWIAFG----------------GQ 277 (305)
T ss_pred chhHHHHHHHHHHHHHHHHHhhccccceeEEEecch--HHHHhh------------HHHhcC----------------CC
Confidence 4455566666666666666543 334667776663 222222 222111 11
Q ss_pred CCCcee-cCCCChhHHHHHHHHHHHHh
Q 046560 302 VSEFVF-WDSAHPSEKAYMIIASPILQ 327 (333)
Q Consensus 302 p~~ylf-wD~~HPT~~~h~~iA~~~~~ 327 (333)
+-+++. -|++||++.+|.++|+.++.
T Consensus 278 ~~~~i~~~DgfHpsq~g~~l~a~~lW~ 304 (305)
T cd01826 278 TWQLIEPVDGFHPSQIANALLAEVFWK 304 (305)
T ss_pred chhhcccccCCCccHHHHHHHHHHhhc
Confidence 234555 69999999999999999875
No 37
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=96.98 E-value=0.0032 Score=52.22 Aligned_cols=25 Identities=20% Similarity=0.409 Sum_probs=21.3
Q ss_pred ceecCCCChhHHHHHHHHHHHHhcc
Q 046560 305 FVFWDSAHPSEKAYMIIASPILQDL 329 (333)
Q Consensus 305 ylfwD~~HPT~~~h~~iA~~~~~~~ 329 (333)
++..|++||++++|+++|+.+.+.+
T Consensus 126 ~~~~DgiHpn~~G~~~~a~~i~~ai 150 (150)
T cd01840 126 WFYGDGVHPNPAGAKLYAALIAKAI 150 (150)
T ss_pred hhcCCCCCCChhhHHHHHHHHHHhC
Confidence 4456999999999999999998753
No 38
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=95.97 E-value=0.52 Score=44.88 Aligned_cols=30 Identities=23% Similarity=0.186 Sum_probs=26.3
Q ss_pred CCCceecCCCChhHHHHHHHHHHHHhcccC
Q 046560 302 VSEFVFWDSAHPSEKAYMIIASPILQDLKK 331 (333)
Q Consensus 302 p~~ylfwD~~HPT~~~h~~iA~~~~~~~~~ 331 (333)
+..++--|-.|.++.+|.++|.++++.+++
T Consensus 323 d~~ffa~DcfHlS~~GHa~~ak~lWNnl~e 352 (397)
T KOG3670|consen 323 DLTFFAPDCFHLSQRGHAIAAKHLWNNLFE 352 (397)
T ss_pred CchhcccCccccchHHHHHHHHHHHHHhhc
Confidence 446777899999999999999999998875
No 39
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=95.41 E-value=0.038 Score=48.18 Aligned_cols=110 Identities=15% Similarity=0.167 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHhcC-ceEEEEecCCCCCcccccccccCCCCCCcc---hhhhHHHHHHHHHHHHHHHHHhhhCCCC
Q 046560 174 SMLVSWTSTIIKDLYEVG-VRKIAIFSTLPLGCLPILRTLHGGLMRSCG---DDDNKAAELFNSKLLAEMKNLSSFLPQA 249 (333)
Q Consensus 174 ~~~v~~~~~~i~~L~~~G-Ar~~vv~~lpplg~~P~~~~~~~~~~~~c~---~~~~~~~~~~N~~L~~~l~~l~~~~~~~ 249 (333)
++-++++.+.++-|-..- -.+|++.+-||+...-...... ..|. ++.|+.+..|++.+.+..+++
T Consensus 96 ~Ey~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~~----e~~~~~~~RtNe~~~~Ya~ac~~la~e~------- 164 (245)
T KOG3035|consen 96 EEYKDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQEQ----EPYVLGPERTNETVGTYAKACANLAQEI------- 164 (245)
T ss_pred HHHHHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHhc----cchhccchhhhhHHHHHHHHHHHHHHHh-------
Confidence 445666666666665554 4578888888876653333221 2233 358999999999999988776
Q ss_pred eEEEeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHHHhcc
Q 046560 250 KIVYVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPILQDL 329 (333)
Q Consensus 250 ~i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~~ 329 (333)
++..+|.++.+.+.- |-.+-.|||++|.|..+++++.++++..+
T Consensus 165 ~l~~vdlws~~Q~~~------------------------------------dw~~~~ltDGLHlS~~G~~ivf~Ei~kvl 208 (245)
T KOG3035|consen 165 GLYVVDLWSKMQESD------------------------------------DWQTSCLTDGLHLSPKGNKIVFDEILKVL 208 (245)
T ss_pred CCeeeeHHhhhhhcc------------------------------------cHHHHHhccceeeccccchhhHHHHHHHH
Confidence 355677776655410 11123478999999999999999999866
Q ss_pred c
Q 046560 330 K 330 (333)
Q Consensus 330 ~ 330 (333)
+
T Consensus 209 ~ 209 (245)
T KOG3035|consen 209 K 209 (245)
T ss_pred H
Confidence 4
No 40
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=87.60 E-value=2.6 Score=39.23 Aligned_cols=109 Identities=12% Similarity=0.125 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHhcCc---eEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeE
Q 046560 175 MLVSWTSTIIKDLYEVGV---RKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKI 251 (333)
Q Consensus 175 ~~v~~~~~~i~~L~~~GA---r~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 251 (333)
...+.+.+-+.++.+.-. -+++.+++|++- .+.+|+-...+|+.+++.++++.. ++
T Consensus 206 ~W~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~r----------------~~~l~~dm~~ln~iy~~~vE~~~g-----k~ 264 (354)
T COG2845 206 EWTKEYEKRVDAILKIAHTHKVPVLWVGMPPFR----------------KKKLNADMVYLNKIYSKAVEKLGG-----KF 264 (354)
T ss_pred HHHHHHHHHHHHHHHHhcccCCcEEEeeCCCcc----------------ccccchHHHHHHHHHHHHHHHhCC-----eE
Confidence 445566666666655433 378889998742 345677788999999999988843 32
Q ss_pred EEeccchhHHhhhcC-CCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHHHHhccc
Q 046560 252 VYVDIYNPLLDLINN-PVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASPILQDLK 330 (333)
Q Consensus 252 ~~~D~~~~~~~i~~n-P~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~~~ 330 (333)
+|+++.+-+.-.+ -..+|+. .-..+-++.-=|++|.|.++-+.+|.+++.-+.
T Consensus 265 --i~i~d~~v~e~G~~f~~~~~D------------------------~NGq~vrlR~~DGIh~T~~Gkrkla~~~~k~I~ 318 (354)
T COG2845 265 --IDIWDGFVDEGGKDFVTTGVD------------------------INGQPVRLRAKDGIHFTKEGKRKLAFYLEKPIR 318 (354)
T ss_pred --EEecccccccCCceeEEeccc------------------------cCCceEEEeccCCceechhhHHHHHHHHHHHHH
Confidence 3444422211110 1111111 011123455569999999999999999987654
No 41
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=86.80 E-value=8.5 Score=32.89 Aligned_cols=21 Identities=19% Similarity=0.109 Sum_probs=18.9
Q ss_pred cCCCChhHHHHHHHHHHHHhc
Q 046560 308 WDSAHPSEKAYMIIASPILQD 328 (333)
Q Consensus 308 wD~~HPT~~~h~~iA~~~~~~ 328 (333)
.|++|..+.+|+.+++.+++-
T Consensus 161 ~DgVHwn~~a~r~ls~lll~h 181 (183)
T cd01842 161 RDGVHWNYVAHRRLSNLLLAH 181 (183)
T ss_pred CCCcCcCHHHHHHHHHHHHHh
Confidence 399999999999999998764
No 42
>PLN02757 sirohydrochlorine ferrochelatase
Probab=81.79 E-value=4 Score=34.06 Aligned_cols=64 Identities=13% Similarity=0.191 Sum_probs=44.7
Q ss_pred HHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEecc---
Q 046560 180 TSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYVDI--- 256 (333)
Q Consensus 180 ~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~--- 256 (333)
+.++|++|.+.|+|+|+| +|.++.... .....+.+.++++++++|+.+|.+...
T Consensus 60 l~eal~~l~~~g~~~vvV--------vP~FL~~G~---------------H~~~DIp~~v~~~~~~~p~~~i~~~~pLG~ 116 (154)
T PLN02757 60 IKDAFGRCVEQGASRVIV--------SPFFLSPGR---------------HWQEDIPALTAEAAKEHPGVKYLVTAPIGL 116 (154)
T ss_pred HHHHHHHHHHCCCCEEEE--------EEhhhcCCc---------------chHhHHHHHHHHHHHHCCCcEEEECCCCCC
Confidence 456677888899999998 566665321 224457888889999999999886643
Q ss_pred chhHHhhhcC
Q 046560 257 YNPLLDLINN 266 (333)
Q Consensus 257 ~~~~~~i~~n 266 (333)
+..+.+++.+
T Consensus 117 ~p~l~~ll~~ 126 (154)
T PLN02757 117 HELMVDVVND 126 (154)
T ss_pred CHHHHHHHHH
Confidence 4455555543
No 43
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=78.52 E-value=7.4 Score=36.20 Aligned_cols=64 Identities=22% Similarity=0.298 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEe
Q 046560 175 MLVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYV 254 (333)
Q Consensus 175 ~~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~ 254 (333)
..++.+.+.++++.++|.+.|+++++|+. .-+ .+ .+..+. |..+.+.++.+++++|+.-| ..
T Consensus 58 ~sid~l~~~~~~~~~~Gi~~v~lFgv~~~-Kd~-----~g------s~A~~~-----~g~v~~air~iK~~~pdl~v-i~ 119 (322)
T PRK13384 58 LPESALADEIERLYALGIRYVMPFGISHH-KDA-----KG------SDTWDD-----NGLLARMVRTIKAAVPEMMV-IP 119 (322)
T ss_pred ECHHHHHHHHHHHHHcCCCEEEEeCCCCC-CCC-----Cc------ccccCC-----CChHHHHHHHHHHHCCCeEE-Ee
Confidence 44678889999999999999999999642 222 11 111111 55677888899999998743 44
Q ss_pred cc
Q 046560 255 DI 256 (333)
Q Consensus 255 D~ 256 (333)
|+
T Consensus 120 DV 121 (322)
T PRK13384 120 DI 121 (322)
T ss_pred ee
Confidence 44
No 44
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=77.15 E-value=8.4 Score=35.80 Aligned_cols=66 Identities=15% Similarity=0.190 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHhcCceEEEEecCCCCC-cccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEE
Q 046560 175 MLVSWTSTIIKDLYEVGVRKIAIFSTLPLG-CLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVY 253 (333)
Q Consensus 175 ~~v~~~~~~i~~L~~~GAr~~vv~~lpplg-~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 253 (333)
..++.+.+.++++.++|.+.|+++++|+-. .-+.. + .+.. .=|..+++.++.+++++|+.- +.
T Consensus 48 ~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~~~Kd~~~----g------s~a~-----~~~g~v~~air~iK~~~pdl~-vi 111 (320)
T cd04824 48 YGVNRLEEFLRPLVAKGLRSVILFGVPLKPGKDDRS----G------SAAD-----DEDGPVIQAIKLIREEFPELL-IA 111 (320)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCCCccccCCcCc----c------cccc-----CCCChHHHHHHHHHHhCCCcE-EE
Confidence 446788899999999999999999997532 22220 0 0111 114456778888999999864 34
Q ss_pred ecc
Q 046560 254 VDI 256 (333)
Q Consensus 254 ~D~ 256 (333)
.|+
T Consensus 112 ~Dv 114 (320)
T cd04824 112 CDV 114 (320)
T ss_pred Eee
Confidence 454
No 45
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=76.43 E-value=9.8 Score=35.32 Aligned_cols=65 Identities=12% Similarity=0.231 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEE
Q 046560 174 SMLVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVY 253 (333)
Q Consensus 174 ~~~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 253 (333)
...++.+.+.++++.++|.+.|+++++|.. .-+.- .+..+. |..+.+.++.+++++|+.-| .
T Consensus 47 r~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~-Kd~~g-----------s~A~~~-----~g~v~~air~iK~~~p~l~v-i 108 (314)
T cd00384 47 RLSVDSLVEEAEELADLGIRAVILFGIPEH-KDEIG-----------SEAYDP-----DGIVQRAIRAIKEAVPELVV-I 108 (314)
T ss_pred eeCHHHHHHHHHHHHHCCCCEEEEECCCCC-CCCCc-----------ccccCC-----CChHHHHHHHHHHhCCCcEE-E
Confidence 345788889999999999999999999642 22211 111111 45567788889999998643 4
Q ss_pred ecc
Q 046560 254 VDI 256 (333)
Q Consensus 254 ~D~ 256 (333)
.|+
T Consensus 109 ~Dv 111 (314)
T cd00384 109 TDV 111 (314)
T ss_pred Eee
Confidence 444
No 46
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=75.81 E-value=9.1 Score=35.62 Aligned_cols=66 Identities=11% Similarity=0.191 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHhcCceEEEEecCCC-CCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEE
Q 046560 174 SMLVSWTSTIIKDLYEVGVRKIAIFSTLP-LGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIV 252 (333)
Q Consensus 174 ~~~v~~~~~~i~~L~~~GAr~~vv~~lpp-lg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~ 252 (333)
...++.+.+.++++.++|.+.|++++++| -..-+.- .+..+. |..+.+.++.+++++|+.- +
T Consensus 50 r~s~d~l~~~v~~~~~~Gi~~v~lFgv~~~~~KD~~g-----------s~A~~~-----~g~v~~air~iK~~~p~l~-v 112 (320)
T cd04823 50 RLSIDELLKEAEEAVDLGIPAVALFPVTPPELKSEDG-----------SEAYNP-----DNLVCRAIRAIKEAFPELG-I 112 (320)
T ss_pred eeCHHHHHHHHHHHHHcCCCEEEEecCCCcccCCccc-----------ccccCC-----CChHHHHHHHHHHhCCCcE-E
Confidence 34578888999999999999999999853 2122211 111111 4566778888999999864 3
Q ss_pred Eecc
Q 046560 253 YVDI 256 (333)
Q Consensus 253 ~~D~ 256 (333)
..|+
T Consensus 113 i~DV 116 (320)
T cd04823 113 ITDV 116 (320)
T ss_pred EEee
Confidence 4454
No 47
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=74.35 E-value=16 Score=32.52 Aligned_cols=61 Identities=21% Similarity=0.292 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEec
Q 046560 176 LVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYVD 255 (333)
Q Consensus 176 ~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 255 (333)
..+-+.+.++.|...|.|+|+|+|=- ++ ....|...+++++.++++..+..+|
T Consensus 84 ~~~~l~di~~sl~~~Gf~~ivivngH----------------gG-----------N~~~l~~~~~~l~~~~~~~~v~~~~ 136 (237)
T PF02633_consen 84 LIALLRDILRSLARHGFRRIVIVNGH----------------GG-----------NIAALEAAARELRQEYPGVKVFVIN 136 (237)
T ss_dssp HHHHHHHHHHHHHHHT--EEEEEESS----------------TT-----------HHHHHHHHHHHHHHHGCC-EEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEECC----------------Hh-----------HHHHHHHHHHHHHhhCCCcEEEEee
Confidence 34445677788899999999998821 11 1124667777888888899999999
Q ss_pred cchhHHhh
Q 046560 256 IYNPLLDL 263 (333)
Q Consensus 256 ~~~~~~~i 263 (333)
.+.+....
T Consensus 137 ~~~~~~~~ 144 (237)
T PF02633_consen 137 WWQLAEDE 144 (237)
T ss_dssp GGGCSHCH
T ss_pred chhccchh
Confidence 98886654
No 48
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=72.43 E-value=9.1 Score=28.98 Aligned_cols=53 Identities=17% Similarity=0.342 Sum_probs=35.7
Q ss_pred HHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEec
Q 046560 180 TSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYVD 255 (333)
Q Consensus 180 ~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 255 (333)
+.+.+++|.+.|+++++| .|.++.... .....+.+.+++++.++++.++.+.+
T Consensus 46 ~~~~l~~l~~~g~~~v~v--------vPlfl~~G~---------------h~~~dip~~~~~~~~~~~~~~i~~~~ 98 (101)
T cd03416 46 LAEALDELAAQGATRIVV--------VPLFLLAGG---------------HVKEDIPAALAAARARHPGVRIRYAP 98 (101)
T ss_pred HHHHHHHHHHcCCCEEEE--------EeeEeCCCc---------------cccccHHHHHHHHHHHCCCeEEEecC
Confidence 345677888899999998 455554321 22235666777788788998887754
No 49
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=71.12 E-value=14 Score=34.41 Aligned_cols=64 Identities=14% Similarity=0.282 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEe
Q 046560 175 MLVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYV 254 (333)
Q Consensus 175 ~~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~ 254 (333)
..++.+.+.++++.++|.+.|+++++|.. .-+. + .+..+. |..+.+.++.+++++|+.-| ..
T Consensus 56 ~s~d~l~~~v~~~~~~Gi~av~LFgv~~~-Kd~~-----g------s~A~~~-----~g~v~rair~iK~~~p~l~v-i~ 117 (323)
T PRK09283 56 LSIDLLVKEAEEAVELGIPAVALFGVPEL-KDED-----G------SEAYNP-----DGLVQRAIRAIKKAFPELGV-IT 117 (323)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCcCCC-CCcc-----c------ccccCC-----CCHHHHHHHHHHHhCCCcEE-EE
Confidence 45777889999999999999999999432 2221 1 111111 45567888889999988643 44
Q ss_pred cc
Q 046560 255 DI 256 (333)
Q Consensus 255 D~ 256 (333)
|+
T Consensus 118 DV 119 (323)
T PRK09283 118 DV 119 (323)
T ss_pred ee
Confidence 54
No 50
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=70.89 E-value=13 Score=34.65 Aligned_cols=65 Identities=12% Similarity=0.350 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEec
Q 046560 176 LVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYVD 255 (333)
Q Consensus 176 ~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 255 (333)
.++.+.+.++++.++|.+.|+++++.+ |......+ .+..+. |..+.+.++.+++.+|+.-| ..|
T Consensus 55 sid~l~~~v~~~~~~GI~~v~lFgvi~----~~~Kd~~g------s~a~~~-----~g~v~~air~iK~~~pdl~v-i~D 118 (324)
T PF00490_consen 55 SIDSLVKEVEEAVDLGIRAVILFGVID----PSKKDEEG------SEAYNP-----DGLVQRAIRAIKKAFPDLLV-ITD 118 (324)
T ss_dssp EHHHHHHHHHHHHHTT--EEEEEEE-S----CSC-BSS-------GGGGST-----TSHHHHHHHHHHHHSTTSEE-EEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeeCC----cccCCcch------hcccCC-----CChHHHHHHHHHHhCCCcEE-EEe
Confidence 367778889999999999999999833 22222111 111211 45667888899999999743 444
Q ss_pred c
Q 046560 256 I 256 (333)
Q Consensus 256 ~ 256 (333)
+
T Consensus 119 v 119 (324)
T PF00490_consen 119 V 119 (324)
T ss_dssp E
T ss_pred c
Confidence 4
No 51
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=70.15 E-value=30 Score=31.32 Aligned_cols=104 Identities=20% Similarity=0.198 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEE
Q 046560 173 TSMLVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIV 252 (333)
Q Consensus 173 ~~~~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~ 252 (333)
++++++.+...++.|....-+-=+|+++.|+ |...+.... . .-..|..++ +.|+..+.++..+++ ++.
T Consensus 147 ~~ei~~~l~~~~~~l~~~nP~~kiilTVSPV---rl~~T~~~~--d--~~~an~~SK---s~Lr~a~~~l~~~~~--~v~ 214 (251)
T PF08885_consen 147 VEEILEDLEAIIDLLRSINPDIKIILTVSPV---RLIATFRDR--D--GLVANQYSK---STLRAAAHELVRAFD--DVD 214 (251)
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEEeccc---hhhcccccc--c--chhhhhhhH---HHHHHHHHHHHhcCC--Cce
Confidence 4678888888888888777765667788775 433332211 1 122233333 457778888887654 567
Q ss_pred EeccchhHHhhhcCCCCCCCccCCcccccccccCCccccCCCCccCCCCCCCceecCCCChhHHHHHHHHHH
Q 046560 253 YVDIYNPLLDLINNPVKSGFSVPDRSCCGTGTIETSVLCNQLIPFTCDNVSEFVFWDSAHPSEKAYMIIASP 324 (333)
Q Consensus 253 ~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~ 324 (333)
||-.|.++.+-+.++.-| ==|..||++.+-..|.+.
T Consensus 215 YFPSYEiv~d~lrdyrfy------------------------------------~~D~~Hps~~aV~~I~~~ 250 (251)
T PF08885_consen 215 YFPSYEIVMDELRDYRFY------------------------------------AEDMRHPSPQAVDYIWER 250 (251)
T ss_pred EcchHhhccCcccccccc------------------------------------cccCCCCCHHHHHHHHhh
Confidence 888887766544432222 117899999988877664
No 52
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=64.78 E-value=4.2 Score=31.06 Aligned_cols=54 Identities=11% Similarity=0.153 Sum_probs=36.1
Q ss_pred HHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEeccc
Q 046560 181 STIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYVDIY 257 (333)
Q Consensus 181 ~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 257 (333)
.+.+++|.+.|+++|+|+ |.++... ....+-+.+.+++++.++|+.+|.+...-
T Consensus 40 ~~~l~~l~~~g~~~ivvv--------P~fL~~G---------------~h~~~DIp~~l~~~~~~~~~~~v~~~~pL 93 (105)
T PF01903_consen 40 EEALERLVAQGARRIVVV--------PYFLFPG---------------YHVKRDIPEALAEARERHPGIEVRVAPPL 93 (105)
T ss_dssp HHCCHHHHCCTCSEEEEE--------EESSSSS---------------HHHHCHHHHHHCHHHHCSTTEEEEE---G
T ss_pred HHHHHHHHHcCCCeEEEE--------eeeecCc---------------cchHhHHHHHHHHHHhhCCceEEEECCCC
Confidence 355688889999999984 6665421 12223477888899999999988876543
No 53
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=56.33 E-value=39 Score=26.20 Aligned_cols=51 Identities=20% Similarity=0.363 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEe
Q 046560 179 WTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYV 254 (333)
Q Consensus 179 ~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~ 254 (333)
.+.+.+++|.+.|+++++| .|.++... ... +.+...+++++.+ |+.++.+.
T Consensus 46 ~~~~~l~~l~~~g~~~i~v--------vP~fL~~G---------------~h~-~~i~~~~~~~~~~-~~~~i~~~ 96 (117)
T cd03414 46 SLPEALERLRALGARRVVV--------LPYLLFTG---------------VLM-DRIEEQVAELAAE-PGIEFVLA 96 (117)
T ss_pred CHHHHHHHHHHcCCCEEEE--------EechhcCC---------------chH-HHHHHHHHHHHhC-CCceEEEC
Confidence 3556777888899999998 45555421 012 2356677778777 77777654
No 54
>KOG2794 consensus Delta-aminolevulinic acid dehydratase [Coenzyme transport and metabolism]
Probab=54.46 E-value=36 Score=31.00 Aligned_cols=67 Identities=19% Similarity=0.364 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEE
Q 046560 174 SMLVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVY 253 (333)
Q Consensus 174 ~~~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 253 (333)
.--++++++.+..|.+.|.|-++++++||- ......+. .+..=|.-.-+.+..|+..+|+. +++
T Consensus 65 r~G~~rL~e~l~plv~~Gl~sViLfgvv~~----~~Kd~~gs-----------~Ads~~gpvi~ai~~lr~~fPdL-~i~ 128 (340)
T KOG2794|consen 65 RLGVNRLKEELAPLVAKGLRSVILFGVVPE----ALKDPTGS-----------EADSDNGPVIRAIRLLRDRFPDL-VIA 128 (340)
T ss_pred HHHHHHHHHHHHHHHHhccceEEEecCCCc----cccCcccc-----------cccCCCCcHHHHHHHHHHhCcce-EEE
Confidence 345778999999999999999999999742 22211110 01112444556788899999997 445
Q ss_pred ecc
Q 046560 254 VDI 256 (333)
Q Consensus 254 ~D~ 256 (333)
.|+
T Consensus 129 cDV 131 (340)
T KOG2794|consen 129 CDV 131 (340)
T ss_pred eee
Confidence 554
No 55
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=50.46 E-value=61 Score=25.84 Aligned_cols=52 Identities=19% Similarity=0.148 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEe
Q 046560 177 VSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYV 254 (333)
Q Consensus 177 v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~ 254 (333)
+..+.+++++|.+.|+++|+|.. ..+.. | ..| ..|.+.+++++ +|..+|.+.
T Consensus 55 ~p~~~eaL~~l~~~G~~~V~V~P--------l~l~~------G---------~e~-~di~~~v~~~~--~~~~~i~~g 106 (127)
T cd03412 55 VDTPEEALAKLAADGYTEVIVQS--------LHIIP------G---------EEY-EKLKREVDAFK--KGFKKIKLG 106 (127)
T ss_pred CCCHHHHHHHHHHCCCCEEEEEe--------CeeEC------c---------HHH-HHHHHHHHHHh--CCCceEEEc
Confidence 34578899999999999999954 33321 1 123 56777787777 566666554
No 56
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=50.04 E-value=28 Score=32.28 Aligned_cols=67 Identities=12% Similarity=0.214 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEE
Q 046560 174 SMLVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVY 253 (333)
Q Consensus 174 ~~~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 253 (333)
...++.+.+.++++.++|.+-|+++++|+-+ .....+ ..+..-|..+++.++.+++.+|+. ++.
T Consensus 57 r~s~d~l~~~~~~~~~lGi~av~LFgvp~~~----~Kd~~g-----------s~A~~~~givqravr~ik~~~p~l-~ii 120 (330)
T COG0113 57 RYSLDRLVEEAEELVDLGIPAVILFGVPDDS----KKDETG-----------SEAYDPDGIVQRAVRAIKEAFPEL-VVI 120 (330)
T ss_pred eccHHHHHHHHHHHHhcCCCEEEEeCCCccc----ccCccc-----------ccccCCCChHHHHHHHHHHhCCCe-EEE
Confidence 4458888899999999999999999998632 111111 001112446677888888888865 334
Q ss_pred ecc
Q 046560 254 VDI 256 (333)
Q Consensus 254 ~D~ 256 (333)
.|+
T Consensus 121 tDv 123 (330)
T COG0113 121 TDV 123 (330)
T ss_pred eee
Confidence 443
No 57
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=46.63 E-value=63 Score=27.58 Aligned_cols=28 Identities=21% Similarity=0.113 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCceEEEEec
Q 046560 172 YTSMLVSWTSTIIKDLYEVGVRKIAIFS 199 (333)
Q Consensus 172 ~~~~~v~~~~~~i~~L~~~GAr~~vv~~ 199 (333)
-+..+-..+.+.|.+|++.|.+.|+.-+
T Consensus 23 ~~~~ik~~L~~~i~~lie~G~~~fi~Gg 50 (177)
T PF06908_consen 23 KIQVIKKALKKQIIELIEEGVRWFITGG 50 (177)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--EEEE--
T ss_pred hHHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 4566788889999999999999998733
No 58
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=46.59 E-value=53 Score=23.77 Aligned_cols=65 Identities=15% Similarity=0.098 Sum_probs=31.5
Q ss_pred cCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHH----HHHHHHHHHhhhCCCCeE-EEecc
Q 046560 190 VGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNS----KLLAEMKNLSSFLPQAKI-VYVDI 256 (333)
Q Consensus 190 ~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~----~L~~~l~~l~~~~~~~~i-~~~D~ 256 (333)
-|||.||++.++=..-.|....... ...+....+.. ...|.. +|+++.+.|+++.|+.+. +++|+
T Consensus 9 p~arSvIv~a~~Y~~~~~~~~~~~~-~~~g~iarYA~-G~DYH~vlk~~L~~l~~~i~~~~~~~~~r~~VDT 78 (78)
T PF08331_consen 9 PGARSVIVLAFPYYPEPPPPPPPPG-PGRGRIARYAW-GRDYHKVLKKKLEQLAEWIRELGPDFEYRIFVDT 78 (78)
T ss_pred CCCcEEEEEEccCCCccccccccCC-CCCeeEeehhc-cCChHHHHHHHHHHHHHHHHHHCCCCCeEEeecC
Confidence 5899999998875441111111100 11233333322 233444 455555556777777543 35553
No 59
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=46.51 E-value=21 Score=25.91 Aligned_cols=21 Identities=14% Similarity=0.314 Sum_probs=15.5
Q ss_pred HHHHHHHHHhcCceEEEEecC
Q 046560 180 TSTIIKDLYEVGVRKIAIFST 200 (333)
Q Consensus 180 ~~~~i~~L~~~GAr~~vv~~l 200 (333)
+.+.+.+|.++||+.|+|..+
T Consensus 52 ~~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 52 VWDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp HHHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHHcCCCEEEEEec
Confidence 345668899999999999765
No 60
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=41.15 E-value=32 Score=26.42 Aligned_cols=23 Identities=22% Similarity=0.403 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHhcCceEEEEecC
Q 046560 178 SWTSTIIKDLYEVGVRKIAIFST 200 (333)
Q Consensus 178 ~~~~~~i~~L~~~GAr~~vv~~l 200 (333)
+.+.+.+.+|.++||+.|+|..+
T Consensus 74 ~~v~~~~~~Lk~~GA~~Ilv~~i 96 (100)
T TIGR03455 74 KVVNELIDKLKAAGARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHHcCCCeEEEech
Confidence 35567788999999999999764
No 61
>PRK13660 hypothetical protein; Provisional
Probab=31.23 E-value=2.6e+02 Score=23.97 Aligned_cols=58 Identities=16% Similarity=0.178 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEE
Q 046560 173 TSMLVSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIV 252 (333)
Q Consensus 173 ~~~~v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~ 252 (333)
+..+-..+.+.|.++++.|.+.|++-+. +| . -.--.+.+-+|++++|+++++
T Consensus 24 ~~~IK~aL~~~l~~~~e~G~~wfi~gga--lG---------------~-----------d~wAaEvvl~LK~~yp~lkL~ 75 (182)
T PRK13660 24 IKYIKKAIKRKLIALLEEGLEWVIISGQ--LG---------------V-----------ELWAAEVVLELKEEYPDLKLA 75 (182)
T ss_pred hHHHHHHHHHHHHHHHHCCCCEEEECCc--ch---------------H-----------HHHHHHHHHHHHhhCCCeEEE
Confidence 4556678889999999999999997441 11 0 111134566777788888776
Q ss_pred Eeccch
Q 046560 253 YVDIYN 258 (333)
Q Consensus 253 ~~D~~~ 258 (333)
.+=-+.
T Consensus 76 ~~~PF~ 81 (182)
T PRK13660 76 VITPFE 81 (182)
T ss_pred EEeCcc
Confidence 554443
No 62
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=28.44 E-value=1.6e+02 Score=23.79 Aligned_cols=37 Identities=11% Similarity=0.119 Sum_probs=24.8
Q ss_pred HHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHH
Q 046560 180 TSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAEL 230 (333)
Q Consensus 180 ~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~ 230 (333)
+.+.+++|.+.|+|+|+|+.+ .+.. .|.+.+-++-..
T Consensus 79 ~~~~l~~l~~~G~~~i~v~p~-------gF~~-------D~~Etl~di~~e 115 (135)
T cd00419 79 TDDALEELAKEGVKNVVVVPI-------GFVS-------DHLETLYELDIE 115 (135)
T ss_pred HHHHHHHHHHcCCCeEEEECC-------cccc-------ccHHHHHHHHHH
Confidence 345678889999999999542 2332 477877665443
No 63
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated
Probab=28.37 E-value=82 Score=31.43 Aligned_cols=60 Identities=20% Similarity=0.305 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEeccc
Q 046560 178 SWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYVDIY 257 (333)
Q Consensus 178 ~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 257 (333)
.++.+.++.|.+.|++-++| . .+..|+..+.++++++++++|+..|+--|+-
T Consensus 226 ~~~~~~a~~Lv~aGvd~i~~-D---------------------------~a~~~~~~~~~~i~~ik~~~p~~~v~agnv~ 277 (479)
T PRK07807 226 GDVAAKARALLEAGVDVLVV-D---------------------------TAHGHQEKMLEALRAVRALDPGVPIVAGNVV 277 (479)
T ss_pred hhHHHHHHHHHHhCCCEEEE-e---------------------------ccCCccHHHHHHHHHHHHHCCCCeEEeeccC
Confidence 35677888999999998666 1 1123477788899999999999888775664
Q ss_pred h--hHHhhhc
Q 046560 258 N--PLLDLIN 265 (333)
Q Consensus 258 ~--~~~~i~~ 265 (333)
+ -..++++
T Consensus 278 t~~~a~~l~~ 287 (479)
T PRK07807 278 TAEGTRDLVE 287 (479)
T ss_pred CHHHHHHHHH
Confidence 4 3444444
No 64
>COG0276 HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism]
Probab=27.39 E-value=1.8e+02 Score=27.36 Aligned_cols=22 Identities=23% Similarity=0.539 Sum_probs=17.9
Q ss_pred HHHHHHHHhcCceEEEEecCCC
Q 046560 181 STIIKDLYEVGVRKIAIFSTLP 202 (333)
Q Consensus 181 ~~~i~~L~~~GAr~~vv~~lpp 202 (333)
.+.+++|.+.|.+++|++-+-|
T Consensus 105 ~~~v~~l~~~gv~~iv~~pLyP 126 (320)
T COG0276 105 EEAVEELKKDGVERIVVLPLYP 126 (320)
T ss_pred HHHHHHHHHcCCCeEEEEECCc
Confidence 3567888999999999987755
No 65
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=27.03 E-value=30 Score=28.09 Aligned_cols=16 Identities=13% Similarity=0.374 Sum_probs=14.0
Q ss_pred hcCceEEEEecCCCCC
Q 046560 189 EVGVRKIAIFSTLPLG 204 (333)
Q Consensus 189 ~~GAr~~vv~~lpplg 204 (333)
..|||+||++|+|-+.
T Consensus 42 ~~GARdFVfwNipQiQ 57 (169)
T KOG4079|consen 42 QSGARDFVFWNIPQIQ 57 (169)
T ss_pred ccCccceEEecchhhc
Confidence 6799999999998764
No 66
>cd03411 Ferrochelatase_N Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=27.01 E-value=67 Score=26.65 Aligned_cols=24 Identities=21% Similarity=0.433 Sum_probs=19.6
Q ss_pred HHHHHHHHHhcCceEEEEecCCCC
Q 046560 180 TSTIIKDLYEVGVRKIAIFSTLPL 203 (333)
Q Consensus 180 ~~~~i~~L~~~GAr~~vv~~lppl 203 (333)
+.+.|++|.+.|+++++|+.+-|.
T Consensus 101 i~~~l~~l~~~g~~~iivlPl~P~ 124 (159)
T cd03411 101 IEEALEELKADGVDRIVVLPLYPQ 124 (159)
T ss_pred HHHHHHHHHHcCCCEEEEEECCcc
Confidence 457778899999999999887553
No 67
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=25.94 E-value=1.1e+02 Score=24.65 Aligned_cols=26 Identities=15% Similarity=0.164 Sum_probs=22.8
Q ss_pred chhhhHHHHHHHHHHHHHHHHHhhhC
Q 046560 221 GDDDNKAAELFNSKLLAEMKNLSSFL 246 (333)
Q Consensus 221 ~~~~~~~~~~~N~~L~~~l~~l~~~~ 246 (333)
.+..+.++..||..|.+.|+++++++
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H 95 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKH 95 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 35677899999999999999999875
No 68
>COG1031 Uncharacterized Fe-S oxidoreductase [Energy production and conversion]
Probab=25.82 E-value=2.6e+02 Score=27.83 Aligned_cols=70 Identities=17% Similarity=0.137 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEecc
Q 046560 177 VSWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYVDI 256 (333)
Q Consensus 177 v~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 256 (333)
.+.+.+.|+.||++|+|+|=+--.++ ..+..+.+.++-...-|- +.|.+.....+..-|+.+....|-
T Consensus 217 ~e~Vv~EVkaLY~~GvrhFRlGRQ~d------ifsy~~~~~g~e~P~PnP------ealekL~~Gir~~AP~l~tLHiDN 284 (560)
T COG1031 217 PEDVVEEVKALYRAGVRHFRLGRQAD------IFSYGADDNGGEVPRPNP------EALEKLFRGIRNVAPNLKTLHIDN 284 (560)
T ss_pred HHHHHHHHHHHHHhccceeeeccccc------eeeecccccCCCCCCCCH------HHHHHHHHHHHhhCCCCeeeeecC
Confidence 45566788999999999997744433 222211111111222111 234444555555568888888876
Q ss_pred ch
Q 046560 257 YN 258 (333)
Q Consensus 257 ~~ 258 (333)
-+
T Consensus 285 aN 286 (560)
T COG1031 285 AN 286 (560)
T ss_pred CC
Confidence 43
No 69
>PF07555 NAGidase: beta-N-acetylglucosaminidase ; InterPro: IPR011496 This family consists of both eukaryotic and prokaryotic hyaluronidases. Human Q9HAR0 from SWISSPROT is expressed during meningioma []. Clostridium perfringens, P26831 from SWISSPROT, is involved in pathogenesis and is likely to act on connectivity tissue during gas gangrene []. It catalyses the random hydrolysis of 1->4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate.; PDB: 2WB5_B 2V5C_B 2VUR_A 2V5D_A 2YDS_A 2CBI_A 2XPK_A 2CBJ_B 2J62_A 2X0Y_A ....
Probab=25.76 E-value=3.2e+02 Score=25.52 Aligned_cols=25 Identities=28% Similarity=0.416 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHhcCceEEEEe
Q 046560 174 SMLVSWTSTIIKDLYEVGVRKIAIF 198 (333)
Q Consensus 174 ~~~v~~~~~~i~~L~~~GAr~~vv~ 198 (333)
+.-++.+.+-+++|+++|+|.|-|+
T Consensus 87 ~~d~~~L~~K~~ql~~lGvr~Fail 111 (306)
T PF07555_consen 87 EEDFEALKAKFDQLYDLGVRSFAIL 111 (306)
T ss_dssp HHHHHHHHHHHHHHHCTT--EEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 4567778888999999999999987
No 70
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=25.01 E-value=1.7e+02 Score=25.53 Aligned_cols=48 Identities=17% Similarity=0.208 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEeccc
Q 046560 178 SWTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYVDIY 257 (333)
Q Consensus 178 ~~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 257 (333)
..+..+++.|.+.|+++|.+..+- . + ...++.+.+++|+++|+..-+-
T Consensus 136 ~Tl~~ai~~L~~~G~~~I~v~~ll--~---------------~---------------~~gl~~l~~~~p~v~i~~~~id 183 (207)
T TIGR01091 136 GTMIAALDLLKKRGAKKIKVLSIV--A---------------A---------------PEGIEAVEKAHPDVDIYTAAID 183 (207)
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEe--c---------------C---------------HHHHHHHHHHCCCCEEEEEEEC
Confidence 356778899999999999887751 0 0 1335567778899998876443
No 71
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=24.37 E-value=2.8e+02 Score=25.51 Aligned_cols=84 Identities=20% Similarity=0.229 Sum_probs=46.7
Q ss_pred HHHHHHHhcCceEEEEecCCCCCcccccccccCC--------------CCCCcchhhhHHHHHH---------------H
Q 046560 182 TIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGG--------------LMRSCGDDDNKAAELF---------------N 232 (333)
Q Consensus 182 ~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~--------------~~~~c~~~~~~~~~~~---------------N 232 (333)
-.+.+|..+|.|.|+|..-|- ..|.+....+. ...|....+- +.+.| -
T Consensus 36 y~l~~L~~aGI~dI~II~~~~--~~~~~~~llGdgs~~gv~itY~~Q~~p~GlA~Av~-~a~~fv~~~~f~l~LGDNi~~ 112 (286)
T COG1209 36 YPLETLMLAGIRDILIVVGPE--DKPTFKELLGDGSDFGVDITYAVQPEPDGLAHAVL-IAEDFVGDDDFVLYLGDNIFQ 112 (286)
T ss_pred hHHHHHHHcCCceEEEEecCC--chhhhhhhhcCccccCcceEEEecCCCCcHHHHHH-HHHhhcCCCceEEEecCceec
Confidence 346788899999999998772 12333332211 0112111111 11111 1
Q ss_pred HHHHHHHHHHhhhCCCCeEEEeccchhHHhhhcCCCCCCCccCC
Q 046560 233 SKLLAEMKNLSSFLPQAKIVYVDIYNPLLDLINNPVKSGFSVPD 276 (333)
Q Consensus 233 ~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~ 276 (333)
..|.+.++.+.++-+|+.|...- ++||++||..+..
T Consensus 113 ~~l~~~~~~~~~~~~ga~i~~~~--------V~dP~rfGV~e~d 148 (286)
T COG1209 113 DGLSELLEHFAEEGSGATILLYE--------VDDPSRYGVVEFD 148 (286)
T ss_pred cChHHHHHHHhccCCCcEEEEEE--------cCCcccceEEEEc
Confidence 15677777777666777765543 3489999976543
No 72
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=23.08 E-value=87 Score=24.02 Aligned_cols=19 Identities=16% Similarity=0.564 Sum_probs=15.1
Q ss_pred HHHHHHHHHhcCceEEEEe
Q 046560 180 TSTIIKDLYEVGVRKIAIF 198 (333)
Q Consensus 180 ~~~~i~~L~~~GAr~~vv~ 198 (333)
+.+.+++|.+.|+|+|+|.
T Consensus 44 i~~~l~~l~~~G~~~i~lv 62 (103)
T cd03413 44 LDDVLAKLKKAGIKKVTLM 62 (103)
T ss_pred HHHHHHHHHHcCCCEEEEE
Confidence 3566678889999999984
No 73
>COG3581 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.04 E-value=1.2e+02 Score=29.27 Aligned_cols=47 Identities=32% Similarity=0.461 Sum_probs=31.8
Q ss_pred HHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEeccc
Q 046560 186 DLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYVDIY 257 (333)
Q Consensus 186 ~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 257 (333)
.+++.|+.+++- +-|.||.|.-... +.++.+|++++|+++++-+|.-
T Consensus 327 e~i~~g~~nvIc--lqPFGCmPnhI~~-----------------------kgm~k~lk~~~p~ani~aVd~d 373 (420)
T COG3581 327 ELIESGVDNVIC--LQPFGCMPNHIVS-----------------------KGMIKGLKRDKPKANIAAVDYD 373 (420)
T ss_pred HHHHcCCCceEE--ecCccCCcHHHHH-----------------------HHHHHHHHhcCCCCceEEeecC
Confidence 344567776654 6699999943221 3467788888888888777764
No 74
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=21.89 E-value=39 Score=29.25 Aligned_cols=16 Identities=44% Similarity=0.461 Sum_probs=13.4
Q ss_pred CccEEEEcCCCcccCC
Q 046560 26 KLLGIMAFGDSILDTG 41 (333)
Q Consensus 26 ~~~~l~vFGDSlsD~G 41 (333)
....+++||||.+|..
T Consensus 201 ~~~~~~~~GD~~ND~~ 216 (254)
T PF08282_consen 201 SPEDIIAFGDSENDIE 216 (254)
T ss_dssp SGGGEEEEESSGGGHH
T ss_pred ccceeEEeecccccHh
Confidence 4468999999999974
No 75
>PRK06520 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=21.75 E-value=1.4e+02 Score=28.66 Aligned_cols=30 Identities=27% Similarity=0.461 Sum_probs=26.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhcCceEEEE
Q 046560 168 DISTYTSMLVSWTSTIIKDLYEVGVRKIAI 197 (333)
Q Consensus 168 ~~~~~~~~~v~~~~~~i~~L~~~GAr~~vv 197 (333)
+.++++..++..+.+.++.|+++|+|.|-+
T Consensus 160 ~~~~~~~dlA~al~~Ei~~L~~aG~~~IQi 189 (368)
T PRK06520 160 DLDDYFDDLAKTWRDAIKAFYDAGCRYLQL 189 (368)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEe
Confidence 356889999999999999999999998766
No 76
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=20.92 E-value=1.2e+02 Score=22.32 Aligned_cols=23 Identities=30% Similarity=0.540 Sum_probs=17.7
Q ss_pred HHHHHHHHHhcCceEEEEecCCC
Q 046560 180 TSTIIKDLYEVGVRKIAIFSTLP 202 (333)
Q Consensus 180 ~~~~i~~L~~~GAr~~vv~~lpp 202 (333)
+.+.+++|.+.|.++++|+.+-+
T Consensus 47 i~~~l~~l~~~g~~~vvvvPl~~ 69 (101)
T cd03409 47 TEEAIRELAEEGYQRVVIVPLAP 69 (101)
T ss_pred HHHHHHHHHHcCCCeEEEEeCcc
Confidence 44667888899999999966544
No 77
>PRK06233 hypothetical protein; Provisional
Probab=20.85 E-value=1.5e+02 Score=28.49 Aligned_cols=30 Identities=23% Similarity=0.360 Sum_probs=26.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCceEEEEe
Q 046560 169 ISTYTSMLVSWTSTIIKDLYEVGVRKIAIF 198 (333)
Q Consensus 169 ~~~~~~~~v~~~~~~i~~L~~~GAr~~vv~ 198 (333)
.++++..++..+.+.++.|+++|+|.|-|=
T Consensus 162 ~eel~~dlA~a~~~Ei~~L~~aG~~~IQiD 191 (372)
T PRK06233 162 WDDYLDDLAQAYHDTIQHFYDLGARYIQLD 191 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEEc
Confidence 568899999999999999999999987763
No 78
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=20.52 E-value=2.7e+02 Score=24.18 Aligned_cols=46 Identities=20% Similarity=0.252 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhcCceEEEEecCCCCCcccccccccCCCCCCcchhhhHHHHHHHHHHHHHHHHHhhhCCCCeEEEecc
Q 046560 179 WTSTIIKDLYEVGVRKIAIFSTLPLGCLPILRTLHGGLMRSCGDDDNKAAELFNSKLLAEMKNLSSFLPQAKIVYVDI 256 (333)
Q Consensus 179 ~~~~~i~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 256 (333)
.+..+++.|.+.|+++|.+..+ +.+ ...++.+.+++|+++|+..-+
T Consensus 139 Tl~~ai~~L~~~G~~~I~~~~l--l~~------------------------------~~gl~~l~~~~p~v~i~~~~i 184 (209)
T PRK00129 139 SAIAAIDLLKKRGAKNIKVLCL--VAA------------------------------PEGIKALEEAHPDVEIYTAAI 184 (209)
T ss_pred HHHHHHHHHHHcCCCEEEEEEE--ecC------------------------------HHHHHHHHHHCCCcEEEEEee
Confidence 5667888999999999998775 110 123566777889999876543
No 79
>PF06812 ImpA-rel_N: ImpA-related N-terminal; InterPro: IPR010657 This entry represents a conserved region located towards the N-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans []. Note that many members are hypothetical proteins.
Probab=20.14 E-value=40 Score=23.19 Aligned_cols=8 Identities=63% Similarity=1.614 Sum_probs=6.1
Q ss_pred ecCCCChh
Q 046560 307 FWDSAHPS 314 (333)
Q Consensus 307 fwD~~HPT 314 (333)
|||.+||.
T Consensus 53 ~W~~l~P~ 60 (62)
T PF06812_consen 53 YWDSLHPQ 60 (62)
T ss_pred CCcccCCC
Confidence 68888885
Done!