Query 046564
Match_columns 160
No_of_seqs 106 out of 805
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 23:40:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046564.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046564hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 1.7E-28 5.7E-33 211.1 11.2 146 5-156 212-366 (413)
2 1t6e_X Xylanase inhibitor; two 99.9 1.9E-24 6.4E-29 183.2 12.3 140 3-156 190-335 (381)
3 3aup_A SBG7S, BG, basic 7S glo 99.9 3.7E-24 1.3E-28 182.5 12.0 138 3-156 215-353 (403)
4 2ewy_A Beta-secretase 2; BACE2 99.7 1.6E-16 5.3E-21 134.0 10.3 130 3-151 184-319 (383)
5 2qp8_A Beta-secretase 1; BACE1 99.6 5.8E-16 2E-20 131.2 9.6 129 4-151 196-331 (395)
6 3vf3_A Beta-secretase 1; struc 99.6 5E-15 1.7E-19 125.6 11.8 129 4-151 203-338 (402)
7 3lpj_A Beta-secretase 1; alzhe 99.6 6.3E-15 2.2E-19 127.3 10.0 130 4-152 249-385 (455)
8 1lya_B Cathepsin D; lysosomal 99.5 1.9E-14 6.5E-19 114.1 9.1 113 4-154 89-204 (241)
9 1j71_A Candidapepsin, aspartic 99.5 2.2E-14 7.6E-19 119.0 9.2 110 4-153 183-292 (334)
10 1mpp_A Pepsin; hydrolase(acid 99.5 1.3E-14 4.5E-19 121.4 7.8 125 3-154 194-323 (361)
11 3cms_A Chymosin B; hydrolase, 99.5 1.9E-14 6.3E-19 119.0 8.3 110 4-154 179-290 (323)
12 2qzx_A Candidapepsin-5; aspart 99.5 1.8E-14 6.1E-19 119.8 8.2 114 3-154 182-300 (342)
13 1tzs_A Cathepsin E; hydrolase, 99.5 3.7E-14 1.3E-18 118.5 9.7 112 3-154 190-305 (351)
14 1htr_B Gastricsin; aspartyl pr 99.5 1.6E-14 5.4E-19 119.5 6.8 112 4-154 179-291 (329)
15 1am5_A Pepsin, acid proteinase 99.5 3.5E-14 1.2E-18 117.2 8.0 110 3-154 177-287 (324)
16 1dpj_A Proteinase A; proteinas 99.5 1.2E-13 4E-18 114.3 11.0 109 4-154 182-292 (329)
17 1ibq_A Aspergillopepsin; aspar 99.5 4.6E-14 1.6E-18 116.8 8.0 114 3-154 176-292 (325)
18 2apr_A Rhizopuspepsin; hydrola 99.5 5.7E-14 2E-18 116.2 8.4 108 3-152 181-289 (325)
19 1izd_A Aspartic proteinase; su 99.5 5.1E-14 1.7E-18 116.6 7.0 112 4-154 178-290 (323)
20 4aa9_A Chymosin; hydrolase, as 99.5 9.9E-14 3.4E-18 114.0 7.4 110 4-154 176-287 (320)
21 1miq_A Plasmepsin; aspartic pr 99.4 2E-13 6.9E-18 115.5 8.3 110 4-155 229-341 (375)
22 1oew_A Endothiapepsin; hydrola 99.4 1.1E-13 3.8E-18 114.7 6.5 113 3-154 180-296 (329)
23 3fv3_A SAPP1P-secreted asparti 99.4 3.5E-13 1.2E-17 111.5 9.4 114 3-153 184-298 (339)
24 1qdm_A Prophytepsin; aspartic 99.4 3.2E-13 1.1E-17 118.0 9.4 60 4-76 221-280 (478)
25 3c9x_A Trichoderma reesei aspa 99.4 2.2E-13 7.5E-18 112.9 7.8 113 3-154 181-297 (329)
26 1yg9_A Aspartic protease BLA G 99.4 2E-13 6.9E-18 113.3 7.5 110 4-153 183-295 (330)
27 1bxo_A Protein (penicillopepsi 99.4 2.1E-13 7.2E-18 112.7 7.1 112 3-154 177-290 (323)
28 3pvk_A Candidapepsin-2; hydrol 99.4 3.2E-13 1.1E-17 111.8 7.6 114 3-153 181-299 (342)
29 2x0b_A Renin; hydrolase-hormon 99.4 2.2E-13 7.6E-18 115.9 5.9 112 4-154 232-346 (383)
30 3k1w_A Renin; protease, altern 99.3 8.9E-13 3E-17 109.1 6.2 111 4-153 189-302 (341)
31 3psg_A Pepsinogen; hydrolase(a 99.3 1.9E-12 6.4E-17 109.3 7.4 110 3-153 221-332 (370)
32 1wkr_A Polyporopepsin; hydrola 99.3 1.8E-12 6.1E-17 107.6 7.0 114 3-153 172-295 (340)
33 2bju_A Plasmepsin II; aspartic 99.3 1.5E-12 5.1E-17 113.3 4.4 110 4-155 305-417 (453)
34 3qvc_A Histo-aspartic protease 99.1 1.1E-10 3.9E-15 101.3 5.2 109 4-155 304-416 (451)
35 1b5f_A Protein (cardosin A); h 98.8 4.3E-09 1.5E-13 83.6 4.6 60 4-76 178-237 (239)
36 1b5f_B Protein (cardosin A); h 95.9 0.0085 2.9E-07 39.8 4.0 37 111-154 12-51 (87)
37 3s8i_A Protein DDI1 homolog 1; 81.0 1.8 6.2E-05 31.5 4.2 35 19-71 23-57 (148)
38 2i1a_A DNA damage-inducible pr 75.3 4.1 0.00014 28.8 4.7 33 19-69 25-57 (148)
39 4ay0_A Chaperone protein CAF1M 46.1 11 0.00038 29.1 2.4 18 19-36 156-173 (218)
40 1lya_A Cathepsin D; lysosomal 43.5 31 0.0011 22.7 4.1 15 52-66 30-44 (97)
41 3slz_A GAG-Pro-POL polyprotein 31.4 46 0.0016 23.7 3.6 28 24-66 23-50 (132)
42 1l4i_A SFAE protein; periplasm 29.6 31 0.0011 26.1 2.5 17 19-35 146-162 (206)
43 4djm_A DRAB; chaperone, PILI; 26.9 25 0.00087 27.4 1.6 18 19-36 178-195 (239)
44 2co7_B SAFB chaperone, putativ 23.3 32 0.0011 26.4 1.6 18 19-36 161-178 (221)
45 2hah_A Protease, retropepsin; 22.8 89 0.003 21.7 3.7 26 24-65 15-40 (116)
46 2hs1_A HIV-1 protease; ultra-h 21.7 1E+02 0.0035 20.8 3.7 26 25-65 10-35 (99)
47 2hiy_A Hypothetical protein; C 21.6 15 0.00053 27.5 -0.6 39 20-58 6-54 (183)
48 3ec0_A Protease; HIV-2, inhibi 20.8 1E+02 0.0035 20.8 3.6 25 25-64 10-34 (99)
49 1klf_A FIMC chaperone, chapero 20.0 31 0.0011 26.1 0.9 17 19-35 146-162 (205)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=99.95 E-value=1.7e-28 Score=211.09 Aligned_cols=146 Identities=46% Similarity=0.815 Sum_probs=123.0
Q ss_pred cccccCcccCCCC---------CcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHH
Q 046564 5 LIKIPLISTLAFR---------SDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDF 75 (160)
Q Consensus 5 ~~~TPL~~~~~~~---------s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~ 75 (160)
++||||+.++..+ +.+|+|+|++|+||++.++++++.|.++++|.+|+||||||++|+||+++|++|+++|
T Consensus 212 l~~tPl~~~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~ 291 (413)
T 3vla_A 212 LTYTPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAF 291 (413)
T ss_dssp SEEEECBCCSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHH
T ss_pred eeEeecccCCccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHH
Confidence 8999999986432 2589999999999999999999999998889999999999999999999999999999
Q ss_pred HHHhcccCcccCCCCCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCCCeEEEEEEeCC
Q 046564 76 AKRAFDKKMIGLAPLAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKRNVMCLGFLDGG 155 (160)
Q Consensus 76 ~~~~~~~~~~~~~~~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~~~~CLa~~~~~ 155 (160)
.+++..+++++++....|+.||+.+....++. ...+|+|+|||.|+ ++.|.|+++||++.++++..||+|+.++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~-~~~lP~i~f~f~g~-----~~~~~l~~~~y~~~~~~~~~Cl~~~~~~ 365 (413)
T 3vla_A 292 IKESAARNITRVASVAPFGACFSTDNILSTRL-GPSVPSIDLVLQSE-----SVVWTITGSNSMVYINDNVVCLGVVDGG 365 (413)
T ss_dssp HHHHHHTTCCEECCCTTCSCEEECTTCCEETT-EECCCCEEEECSST-----TCEEEECHHHHEEEEETTEEEECEEEEE
T ss_pred HHHhcccCCCcCCCCCCCcceeccCCcccccc-ccCCCcEEEEEcCC-----cEEEEeCccceEEEeCCCcEEEEEEecC
Confidence 99986444666655567899999865422111 23699999999984 5899999999999988889999999765
Q ss_pred C
Q 046564 156 P 156 (160)
Q Consensus 156 ~ 156 (160)
.
T Consensus 366 ~ 366 (413)
T 3vla_A 366 S 366 (413)
T ss_dssp S
T ss_pred C
Confidence 3
No 2
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=99.91 E-value=1.9e-24 Score=183.15 Aligned_cols=140 Identities=29% Similarity=0.505 Sum_probs=111.9
Q ss_pred CCcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhcc-
Q 046564 3 GLLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFD- 81 (160)
Q Consensus 3 ~~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~- 81 (160)
..+.||||+.++.. .+|+|+|++|+||++.++++.+.|. .+|+||||||++|+||+++|++|+++|.+++..
T Consensus 190 g~l~~tPl~~~~~~--~~y~v~l~~i~vg~~~~~~~~~~~~-----~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~ 262 (381)
T 1t6e_X 190 QSMPYTPLVTKGGS--PAHYISARSIVVGDTRVPVPEGALA-----TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQ 262 (381)
T ss_dssp TTCCEEECBCCTTC--CSCEECEEEEEETTEECCCCTTCSC-----TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC
T ss_pred CcceeeccccCCCC--cceEEEEEEEEEcCEEecCCHHHcc-----CCCEEEECCCccEEeCHHHHHHHHHHHHHhhccc
Confidence 46899999988654 3699999999999999998877774 478999999999999999999999999998851
Q ss_pred ----cCcccC-CCCCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCCCeEEEEEEeCCC
Q 046564 82 ----KKMIGL-APLAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKRNVMCLGFLDGGP 156 (160)
Q Consensus 82 ----~~~~~~-~~~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~~~~CLa~~~~~~ 156 (160)
.+++++ +....++.||+.+....... ...+|+|+|+|.| |+.|+|+++||++.+.++..||+|++++.
T Consensus 263 ~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~-~~~~P~i~f~f~g------g~~~~l~~~~y~~~~~~~~~Cl~~~~~~~ 335 (381)
T 1t6e_X 263 HANGAPVARAVEAVAPFGVCYDTKTLGNNLG-GYAVPNVQLGLDG------GSDWTMTGKNSMVDVKQGTACVAFVEMKG 335 (381)
T ss_dssp -------CCEECCCTTCSCEEEGGGCCEETT-EECCCCEEEEETT------SCEEEECHHHHEEEEETTEEEESEEECCC
T ss_pred ccccccccccCCCCCCCCccCCCCCCccccc-CCcCCeEEEEECC------CcEEEeCCCeEEEEcCCCeEEEEEEcCCC
Confidence 124444 33457899998764321111 1368999999997 58999999999999877889999998754
No 3
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=99.91 E-value=3.7e-24 Score=182.53 Aligned_cols=138 Identities=32% Similarity=0.557 Sum_probs=104.2
Q ss_pred CCcccccCcccCCCCCcceEEEeEEEEECCEEe-eecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhcc
Q 046564 3 GLLIKIPLISTLAFRSDDYFINLKSIKVDGKVV-SFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFD 81 (160)
Q Consensus 3 ~~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l-~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~ 81 (160)
+.+.||||+.++. .+|+|+|++|+||++.+ .++.+.|.++..|.+|+||||||++|+||+++|++|+++|.+++..
T Consensus 215 ~~l~~~Pl~~~~~---~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~ 291 (403)
T 3aup_A 215 HDLAFTPLTITLQ---GEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPK 291 (403)
T ss_dssp TTEEEEECEECTT---SCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCG
T ss_pred CceeecccccCCC---CcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhcc
Confidence 3789999998763 48999999999999999 8888889888889999999999999999999999999999988862
Q ss_pred cCcccCCCCCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCCCeEEEEEEeCCC
Q 046564 82 KKMIGLAPLAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKRNVMCLGFLDGGP 156 (160)
Q Consensus 82 ~~~~~~~~~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~~~~CLa~~~~~~ 156 (160)
+++++....+++||+-+.. ..+|+|+|+|.|+. ++.|.|+++||++...++..|++|++++.
T Consensus 292 --~~~~~~~~~~~~c~~c~~~-------~~~P~i~f~f~g~~----~~~~~l~~~~y~~~~~~~~~C~~~~~~~~ 353 (403)
T 3aup_A 292 --QAQVKSVAPFGLCFNSNKI-------NAYPSVDLVMDKPN----GPVWRISGEDLMVQAQPGVTCLGVMNGGM 353 (403)
T ss_dssp --GGEECCCTTCSCEECGGGC-------CCCCCEEEEESSTT----CCEEEECHHHHEEEC---CEEECEEECCS
T ss_pred --ccccCCCCCCCceEECCCc-------CcCCcEEEEEcCCC----ceEEEEcccceEEEcCCCeEEEEEEcCCC
Confidence 4555445578899986532 25899999999821 27999999999998877789999998764
No 4
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=99.67 E-value=1.6e-16 Score=133.95 Aligned_cols=130 Identities=16% Similarity=0.216 Sum_probs=96.8
Q ss_pred CCcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhccc
Q 046564 3 GLLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDK 82 (160)
Q Consensus 3 ~~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~ 82 (160)
..+.|||++.+ .+|+|+|.+|+||++.+.++...|. .+++||||||++++||+++|++|.+++.++..
T Consensus 184 g~l~~~p~~~~-----~~~~v~l~~i~v~g~~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~-- 251 (383)
T 2ewy_A 184 GDIWYTPIKEE-----WYYQIEILKLEIGGQSLNLDCREYN-----ADKAIVDSGTTLLRLPQKVFDAVVEAVARASL-- 251 (383)
T ss_dssp SCEEEEECSSB-----TTBBCCEEEEEETTEECCCCTTTTT-----SSCEEECTTCSSEEEEHHHHHHHHHHHHHTTC--
T ss_pred CccEEEecCCC-----ceEEEEEEEEEECCEEccccccccC-----CccEEEEcCCccccCCHHHHHHHHHHHhhhcc--
Confidence 45789999853 4799999999999999988765552 35799999999999999999999999987764
Q ss_pred CcccCCC---CCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeC---CCeEEEEE
Q 046564 83 KMIGLAP---LAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIK---RNVMCLGF 151 (160)
Q Consensus 83 ~~~~~~~---~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~---~~~~CLa~ 151 (160)
.++.+. ...+..|++.+.... ..+|+|+|+|.|++ +.++..|.|++++|++... ++..|++|
T Consensus 252 -~~~~~~~~~~~~~~~C~~~~~~~~-----~~~P~i~f~f~g~~-~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~ 319 (383)
T 2ewy_A 252 -IPEFSDGFWTGSQLACWTNSETPW-----SYFPKISIYLRDEN-SSRSFRITILPQLYIQPMMGAGLNYECYRF 319 (383)
T ss_dssp -SSCCCHHHHHTSEEEEECSSSCGG-----GGSCCEEEEEECSS-TTEEEEEEECHHHHEEEECCCTTCSEEEEE
T ss_pred -cccCccccccccccccccCCcccH-----hhCCcEEEEECCCC-CCceEEEEEChHHheeecccCCCCceeEEE
Confidence 222211 012467998653221 25899999999831 1122589999999999874 36789875
No 5
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=99.64 E-value=5.8e-16 Score=131.23 Aligned_cols=129 Identities=13% Similarity=0.138 Sum_probs=94.5
Q ss_pred CcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhcccC
Q 046564 4 LLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDKK 83 (160)
Q Consensus 4 ~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~~ 83 (160)
.+.|||++.. .+|+|.|.+|+||++.++++...|. .+++||||||++++||+++|++|.++|.++..
T Consensus 196 ~l~~~p~~~~-----~~~~v~l~~i~v~g~~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~--- 262 (395)
T 2qp8_A 196 SLWYTPIRRE-----WYYEVIIVRVEINGQDLKMDCKEYN-----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS--- 262 (395)
T ss_dssp EEEEEECCSB-----TTBBCCEEEEEETTEECCCCGGGGG-----SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT---
T ss_pred ceEEeccCCC-----ceEEEEEEEEEECCEEcccCccccC-----CceEEEEcCCCcEecCHHHHHHHHHHHhhhcc---
Confidence 4678998752 4799999999999999988766552 35799999999999999999999999988764
Q ss_pred cccCCC---CCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCC----CeEEEEE
Q 046564 84 MIGLAP---LAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKR----NVMCLGF 151 (160)
Q Consensus 84 ~~~~~~---~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~----~~~CLa~ 151 (160)
.++.+. ......|++.+... ...+|+|+|+|.|++ ..+...|.|++++|++...+ ...|++|
T Consensus 263 ~~~~~~~~~~~~~~~C~~~~~~~-----~~~~P~i~f~f~g~~-~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~ 331 (395)
T 2qp8_A 263 TEKFPDGFWLGEQLVCWQAGTTP-----WNIFPVISLYLMGEV-TNQSFRITILPQQYLRPVEDVATSQDDCYKF 331 (395)
T ss_dssp TSCCCHHHHTTCSCEEESTTCCC-----GGGSCCEEEEEECSS-TTEEEEEEECHHHHEEEECCTTCCSCEEEEE
T ss_pred cccCCccccccccccccccccch-----HhhCCcEEEEEccCC-CCceEEEEECHHHhEeecccCCCCCceEEEE
Confidence 222211 01135799865322 135899999999831 01113799999999998753 3589754
No 6
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=99.60 E-value=5e-15 Score=125.58 Aligned_cols=129 Identities=13% Similarity=0.132 Sum_probs=95.6
Q ss_pred CcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhcccC
Q 046564 4 LLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDKK 83 (160)
Q Consensus 4 ~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~~ 83 (160)
.+.|+|+... .+|.|+|.+|+||++.+.++...|. ..++||||||++++||+++|+++.+++.++..
T Consensus 203 ~l~~~p~~~~-----~~w~v~l~~i~v~g~~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~--- 269 (402)
T 3vf3_A 203 SLWYTPIRRE-----WYYEVIIVRVEINGQDLKMDCKEYN-----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS--- 269 (402)
T ss_dssp EEEEEECSSB-----TTBEECEEEEEETTEECCCCGGGGG-----SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT---
T ss_pred ceEEEeCCcC-----cEEEEEEeEEEECCEEecccccccC-----CCeEEEECCCCcccCCHHHHHHHHHHHhhhcc---
Confidence 4678998752 4799999999999999988755442 35799999999999999999999999988764
Q ss_pred cccCCC---CCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCCC----eEEEEE
Q 046564 84 MIGLAP---LAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKRN----VMCLGF 151 (160)
Q Consensus 84 ~~~~~~---~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~~----~~CLa~ 151 (160)
..+... ...+..|++...... ..+|+|+|+|.|.+ ..+...|.|++++|++...+. ..|++|
T Consensus 270 ~~~~~~~~~~~~~~~C~~~~~~~~-----~~~P~i~f~f~g~~-~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~ 338 (402)
T 3vf3_A 270 TEKFPDGFWLGEQLVCWQAGTTPW-----NIFPVISLYLMGEV-TNQSFRITILPQQYLRPVEDVATSQDDCYKF 338 (402)
T ss_dssp TSCCCTTGGGTCSCEEEETTCCCG-----GGSCCEEEEEECSS-TTEEEEEEECHHHHEEECCCGGGTTEEEEEE
T ss_pred ccccCccccccccccccccccchH-----hhCCceEEEEecCC-CCceEEEEECHHHheehhccCCCCCceEEEE
Confidence 222211 122578998764321 25899999999831 001126999999999987542 589975
No 7
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=99.57 E-value=6.3e-15 Score=127.29 Aligned_cols=130 Identities=13% Similarity=0.128 Sum_probs=96.3
Q ss_pred CcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhcccC
Q 046564 4 LLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDKK 83 (160)
Q Consensus 4 ~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~~ 83 (160)
.+.|||+... .+|.|+|.+|+||++.+.++...|. ..++||||||++++||+++|+++.+++.++..
T Consensus 249 ~l~~~p~~~~-----~~w~v~l~~i~v~g~~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~--- 315 (455)
T 3lpj_A 249 SLWYTPIRRE-----WYYEVIIVRVEINGQDLKMDCKEYN-----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS--- 315 (455)
T ss_dssp EEEEEECCSB-----TTBBCCEEEEEETTEECCCCGGGGG-----SSCEEECTTSSSEEEEHHHHHHHHHHHHHHTT---
T ss_pred ceEEEecCCC-----ceeEEEEeEEEECCEEccccccccC-----CCeEEEECCCcceeCCHHHHHHHHHHhhhhcc---
Confidence 4678998752 4799999999999999988765442 45799999999999999999999999988764
Q ss_pred cccCCC---CCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCCC----eEEEEEE
Q 046564 84 MIGLAP---LAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKRN----VMCLGFL 152 (160)
Q Consensus 84 ~~~~~~---~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~~----~~CLa~~ 152 (160)
..+... ...+..|++...... ..+|+|+|+|.|.+ ..+...|.|++++|++.+.+. ..|++|.
T Consensus 316 ~~~~~~~~~~g~~~~C~~~~~~~~-----~~~P~i~f~f~g~~-~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~ 385 (455)
T 3lpj_A 316 TEKFPDGFWLGEQLVCWQAGTTPW-----NIFPVISLYLMGEV-TNQSFRITILPQQYLRPVEDVATSQDDCYKFA 385 (455)
T ss_dssp TSCCCHHHHTTCSCEEESTTCCCG-----GGSCCEEEEEECSS-TTEEEEEEECHHHHEEEECCTTCCSCEEEEEC
T ss_pred ccccCcccccCcceecccccCCch-----hcCCcEEEEEcCCC-cCceEEEEECHHHheEeccCCCCCCceEEEEe
Confidence 222211 122578998764322 25899999999831 000125999999999988642 5899853
No 8
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.54 E-value=1.9e-14 Score=114.12 Aligned_cols=113 Identities=14% Similarity=0.187 Sum_probs=84.1
Q ss_pred CcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhcccC
Q 046564 4 LLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDKK 83 (160)
Q Consensus 4 ~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~~ 83 (160)
.+.|+|+... .+|.|+|.+|+|+++.+.. ....++||||||++++||+++|+++.+++.++..
T Consensus 89 ~l~~~p~~~~-----~~~~v~l~~i~v~~~~~~~---------~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~--- 151 (241)
T 1lya_B 89 SLSYLNVTRK-----AYWQVHLDQVEVASGLTLC---------KEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPL--- 151 (241)
T ss_dssp EEEEEECSSB-----TTBEEEEEEEEETTSCEES---------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEE---
T ss_pred ceEEEECccc-----cEEEEEEeEEEECCeeEec---------cCCCEEEEECCCccccCCHHHHHHHHHHhCCeec---
Confidence 4788998742 5899999999999986521 1235799999999999999999999988743221
Q ss_pred cccCCCCCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCC--CeEEE-EEEeC
Q 046564 84 MIGLAPLAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKR--NVMCL-GFLDG 154 (160)
Q Consensus 84 ~~~~~~~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~--~~~CL-a~~~~ 154 (160)
.... -.-.|++.+ .+|+|+|+|. |+.+.|++++|++...+ +..|+ +|...
T Consensus 152 ---~~g~-~~~~C~~~~----------~~p~i~f~f~-------g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~ 204 (241)
T 1lya_B 152 ---IQGE-YMIPCEKVS----------TLPAITLKLG-------GKGYKLSPEDYTLKVSQAGKTLCLSGFMGM 204 (241)
T ss_dssp ---ETTE-EEEEGGGGG----------GSCCEEEEET-------TEEEEECTTTSEEEETTTTSSEEEESEEEC
T ss_pred ---cCCc-EEEECCCCc----------cCCeEEEEEC-------CEEEEECHHHhEEEccCCCCCeeEEEEEec
Confidence 0111 112487542 4799999994 48999999999998853 57899 48764
No 9
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=99.53 E-value=2.2e-14 Score=118.99 Aligned_cols=110 Identities=12% Similarity=0.081 Sum_probs=84.4
Q ss_pred CcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhcccC
Q 046564 4 LLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDKK 83 (160)
Q Consensus 4 ~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~~ 83 (160)
.+.|+|++.+ .+|+|.|.+|+|||+.+..+ .++||||||++++||+++|++|.+++.++..
T Consensus 183 ~l~~~p~~~~-----~~~~v~l~~i~v~g~~~~~~-----------~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~--- 243 (334)
T 1j71_A 183 TLTALPVTSS-----VELRVHLGSINFDGTSVSTN-----------ADVVLDSGTTITYFSQSTADKFARIVGATWD--- 243 (334)
T ss_dssp EEEEEECCCS-----SSCEEEEEEEEETTEEEEEE-----------EEEEECTTCSSEEECHHHHHHHHHHHTCEEE---
T ss_pred ceEEEEccCC-----CeEEEEEeEEEECCEeccCC-----------ccEEEeCCCCcEecCHHHHHHHHHHcCCccc---
Confidence 4678998753 37999999999999987542 4699999999999999999999999865442
Q ss_pred cccCCCCCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCCCeEEEEEEe
Q 046564 84 MIGLAPLAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKRNVMCLGFLD 153 (160)
Q Consensus 84 ~~~~~~~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~~~~CLa~~~ 153 (160)
.....-.+..|+. .|.|+|+|.| |+.|.|++++|++...++..|++...
T Consensus 244 --~~~~~~~~~~C~~-------------~p~i~f~f~~------g~~~~i~~~~y~~~~~~~~~C~~~i~ 292 (334)
T 1j71_A 244 --SRNEIYRLPSCDL-------------SGDAVFNFDQ------GVKITVPLSELILKDSDSSICYFGIS 292 (334)
T ss_dssp --TTTTEEECSSSCC-------------CSEEEEEEST------TCEEEEEGGGGEEECSSSSCEEESEE
T ss_pred --CCCceEEEEcCCC-------------CCceEEEEcC------CcEEEECHHHheeecCCCCeeEEEEe
Confidence 1111111245752 5999999986 68999999999998766556987443
No 10
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=99.53 E-value=1.3e-14 Score=121.40 Aligned_cols=125 Identities=14% Similarity=0.019 Sum_probs=91.2
Q ss_pred CCcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceE-EeccccceeechHHHHHHHHHHHHHhcc
Q 046564 3 GLLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAK-ISTFTPYAVLHSAIYNALAKDFAKRAFD 81 (160)
Q Consensus 3 ~~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~i-iDSGt~~T~L~~~~Y~~l~~a~~~~~~~ 81 (160)
..+.|||++.+...+ .+|+|.|.+|+|+++.+..+ ...++| |||||++++||+++|++|.+++.++..
T Consensus 194 g~l~~~p~~~~~~~~-~~~~v~l~~i~v~~~~~~~~---------~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~- 262 (361)
T 1mpp_A 194 GDIQYTDVLKSRGGY-FFWDAPVTGVKIDGSDAVSF---------DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT- 262 (361)
T ss_dssp SCCEEEECEEETTEE-EEEEEEEEEEEETTEEEEEE---------EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE-
T ss_pred CceEEEEcccCCCce-eEEEEEEeEEEECCeeeccC---------CCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc-
Confidence 468899999765322 37889999999999987532 125799 999999999999999999998854322
Q ss_pred cCcccCCCCCCCcccccccCCCccCCCCCCc-CeEEEEEc-CCCCCCCceEEEEecCceEEEeC-CCeEEE-EEEeC
Q 046564 82 KKMIGLAPLAPFGARFNTKNVATTKNAGPAV-PTMDLELR-GIGNSSSNTYWRICGANSMARIK-RNVMCL-GFLDG 154 (160)
Q Consensus 82 ~~~~~~~~~~~fdlCy~~s~~~~~~~~~~~v-P~v~l~F~-g~~~~~~g~~~~l~~~n~~~~~~-~~~~CL-a~~~~ 154 (160)
.... .-...|++.. .+ |+|+|+|+ |+ ...+|+.|.|++++|++... ++..|+ +|.+.
T Consensus 263 ----~~~g-~~~~~C~~~~----------~~~p~i~f~f~~g~-~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~ 323 (361)
T 1mpp_A 263 ----ESQQ-GYTVPCSKYQ----------DSKTTFSLVLQKSG-SSSDTIDVSVPISKMLLPVDKSGETCMFIVLPD 323 (361)
T ss_dssp ----EETT-EEEEEHHHHT----------TCCCEEEEEEECTT-CSSCEEEEEEEGGGGEEECSSSSCEEEESEEEE
T ss_pred ----CCCC-cEEEECCCcc----------cCCCcEEEEEEcCC-cCCCCeEEEECHHHhEEecCCCCCeeEEEEEeC
Confidence 1111 1124698642 46 99999994 31 01125899999999999876 457998 88864
No 11
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=99.52 E-value=1.9e-14 Score=118.96 Aligned_cols=110 Identities=17% Similarity=0.202 Sum_probs=84.2
Q ss_pred CcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhcccC
Q 046564 4 LLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDKK 83 (160)
Q Consensus 4 ~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~~ 83 (160)
.+.|||+... .+|+|+|.+|+||++.+.++. ..++||||||++++||+++|++|.+++.+..
T Consensus 179 ~l~~~p~~~~-----~~~~v~l~~i~v~~~~~~~~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~---- 240 (323)
T 3cms_A 179 SLHWVPVTVQ-----QYWQFTVDSVTISGVVVACEG---------GCQAILDTGTSKLVGPSSDILNIQQAIGATQ---- 240 (323)
T ss_dssp EEEEEECSSB-----TTBEEEEEEEEETTEEEESTT---------CEEEEECTTCCSEEECHHHHHHHHHHHTCEE----
T ss_pred ceEEEECccC-----CeEEEEEeeEEECCEEeecCC---------CcEEEEecCCccEeCCHHHHHHHHHHhCCee----
Confidence 4789999742 489999999999999876431 3579999999999999999999988874221
Q ss_pred cccCCCCCCC-cccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCCCeEEEE-EEeC
Q 046564 84 MIGLAPLAPF-GARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKRNVMCLG-FLDG 154 (160)
Q Consensus 84 ~~~~~~~~~f-dlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~~~~CLa-~~~~ 154 (160)
. . ...+ -.|++.+ .+|+|+|+|.| +.|.|++++|++. ++..|+. |...
T Consensus 241 --~-~-~g~~~~~C~~~~----------~~P~i~f~f~g-------~~~~i~~~~y~~~--~~~~C~~~i~~~ 290 (323)
T 3cms_A 241 --N-Q-YGEFDIDCDNLS----------YMPTVVFEING-------KMYPLTPSAYTSQ--DQGFCTSGFQSE 290 (323)
T ss_dssp --E-T-TTEEEECTTCTT----------TSCCEEEEETT-------EEEEECHHHHEEE--ETTEEEESEEEC
T ss_pred --c-C-CCcEEEECCCCc----------cCceEEEEECC-------EEEEECHHHhccC--CCCEEEEEEEeC
Confidence 1 1 1112 3588642 47999999954 8999999999998 4568995 8765
No 12
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=99.52 E-value=1.8e-14 Score=119.77 Aligned_cols=114 Identities=13% Similarity=0.140 Sum_probs=85.0
Q ss_pred CCcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhccc
Q 046564 3 GLLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDK 82 (160)
Q Consensus 3 ~~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~ 82 (160)
..+.|+|++.+ .+|+|.|.+|+|||+.+..+ .++||||||++++||+++|++|.+++.++..
T Consensus 182 g~l~~~p~~~~-----~~~~v~l~~i~v~g~~~~~~-----------~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~-- 243 (342)
T 2qzx_A 182 GSLVDLPITSE-----KKLTVGLRSVNVRGRNVDAN-----------TNVLLDSGTTISYFTRSIVRNILYAIGAQMK-- 243 (342)
T ss_dssp SCCEEEECCCS-----SSCEEEEEEEEETTEEEEEE-----------EEEEECTTCSSEEECHHHHHHHHHHHTCEEE--
T ss_pred cceEEEeccCC-----ceEEEEEeEEEECCEecCCC-----------cCEEEeCCCCCEEcCHHHHHHHHHHhCCeee--
Confidence 46789999754 37999999999999987642 4699999999999999999999999865543
Q ss_pred CcccCCCCCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeC-----CCeEEEEEEeC
Q 046564 83 KMIGLAPLAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIK-----RNVMCLGFLDG 154 (160)
Q Consensus 83 ~~~~~~~~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~-----~~~~CLa~~~~ 154 (160)
..+.....-.-.|+. .|.|+|+|.| |+.|.|++++|++... ++..|++....
T Consensus 244 -~~~~~~~~~~~~C~~-------------~p~i~f~f~~------g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~ 300 (342)
T 2qzx_A 244 -FDSAGNKVYVADCKT-------------SGTIDFQFGN------NLKISVPVSEFLFQTYYTSGKPFPKCEVRIRE 300 (342)
T ss_dssp -ECTTSCEEEEECTTC-------------CCEEEEEETT------TEEEEEEGGGGEECCBCTTSCBCSSEEESEEE
T ss_pred -eccCCCcEEEEECCC-------------CCcEEEEECC------CcEEEEcHHHhcccccccCCCCCCccEEEEec
Confidence 111111000124742 5999999986 6999999999998752 24689985543
No 13
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=99.52 E-value=3.7e-14 Score=118.50 Aligned_cols=112 Identities=18% Similarity=0.183 Sum_probs=84.3
Q ss_pred CCcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhccc
Q 046564 3 GLLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDK 82 (160)
Q Consensus 3 ~~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~ 82 (160)
..+.|||+... .+|+|.|.+|+||++.+.. ....++||||||++++||+++|++|.+++.+...
T Consensus 190 g~l~~~p~~~~-----~~~~v~l~~i~v~~~~~~~---------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-- 253 (351)
T 1tzs_A 190 GSLNWVPVTKQ-----AYWQIALDNIQVGGTVMFC---------SEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPV-- 253 (351)
T ss_dssp SCCEEEECSEE-----TTEEEEEEEEEETTEEEEC---------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC--
T ss_pred CceEEEecCCC-----ceEEEEeCEEEECCceEEc---------CCCceEEeccCCcceeCCHHHHHHHHHHhCCccc--
Confidence 46789999752 4899999999999998642 1235799999999999999999999888743211
Q ss_pred CcccCCCCCCC-cccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCC--CeEEE-EEEeC
Q 046564 83 KMIGLAPLAPF-GARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKR--NVMCL-GFLDG 154 (160)
Q Consensus 83 ~~~~~~~~~~f-dlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~--~~~CL-a~~~~ 154 (160)
. ..+ -.|++.. .+|+|+|+|.| +.|.|++++|++.... +..|+ +|...
T Consensus 254 -----~--g~~~~~C~~~~----------~~P~i~f~f~g-------~~~~i~~~~yi~~~~~~~~~~C~~~~~~~ 305 (351)
T 1tzs_A 254 -----D--GEYAVECANLN----------VMPDVTFTING-------VPYTLSPTAYTLLDFVDGMQFCSSGFQGL 305 (351)
T ss_dssp -----S--SSEEECGGGGG----------GSCCEEEEETT-------EEEEECTTTSEECC-----CCEEESEEEC
T ss_pred -----C--CeEEEeCCCCc----------cCCcEEEEECC-------EEEEECHHHhEeeccCCCCCeEEEEEEEC
Confidence 1 222 3598642 47999999954 8999999999987642 46899 68764
No 14
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=99.51 E-value=1.6e-14 Score=119.51 Aligned_cols=112 Identities=11% Similarity=0.113 Sum_probs=84.4
Q ss_pred CcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhcccC
Q 046564 4 LLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDKK 83 (160)
Q Consensus 4 ~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~~ 83 (160)
.+.|||+... .+|+|+|.+|+||++.+.. ..+..++||||||++++||+++|++|.+++.++..
T Consensus 179 ~l~~~p~~~~-----~~~~v~l~~i~v~~~~~~~--------~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~--- 242 (329)
T 1htr_B 179 QIYWAPVTQE-----LYWQIGIEEFLIGGQASGW--------CSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQED--- 242 (329)
T ss_dssp EEEEEEBCSS-----SSCEEEECEEEETTEECCT--------TTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEEC---
T ss_pred ceEEEECCCC-----ceEEEEEeEEEECCceeee--------cCCCceEEEecCCccEECCHHHHHHHHHHhCCeec---
Confidence 4788998742 4799999999999997541 12245799999999999999999999988743221
Q ss_pred cccCCCCCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCCCeEEE-EEEeC
Q 046564 84 MIGLAPLAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKRNVMCL-GFLDG 154 (160)
Q Consensus 84 ~~~~~~~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~~~~CL-a~~~~ 154 (160)
... .-.-.|++.. .+|+|+|+|.| +.|.|++++|++... + .|+ +|...
T Consensus 243 ---~~g-~~~~~C~~~~----------~~P~i~f~f~g-------~~~~i~~~~y~~~~~-g-~C~~~~~~~ 291 (329)
T 1htr_B 243 ---EYG-QFLVNCNSIQ----------NLPSLTFIING-------VEFPLPPSSYILSNN-G-YCTVGVEPT 291 (329)
T ss_dssp ---TTS-CEEECGGGGG----------GSCCEEEEETT-------EEEEECHHHHEEECS-S-CEEESEEEE
T ss_pred ---CCC-eEEEeCCCcc----------cCCcEEEEECC-------EEEEECHHHhcccCC-C-EEEEEEEEC
Confidence 111 1123598642 47999999954 899999999999876 5 899 68754
No 15
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=99.50 E-value=3.5e-14 Score=117.23 Aligned_cols=110 Identities=16% Similarity=0.229 Sum_probs=84.8
Q ss_pred CCcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhccc
Q 046564 3 GLLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDK 82 (160)
Q Consensus 3 ~~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~ 82 (160)
..+.|||+... .+|.|.|.+|+||++.+.. .+ .++||||||++++||+++|+++.+++.++ .
T Consensus 177 g~l~~~p~~~~-----~~~~v~l~~i~v~~~~~~~---------~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~-- 238 (324)
T 1am5_A 177 GSIHWIPVTAE-----KYWQVALDGITVNGQTAAC---------EG-CQAIVDTGTSKIVAPVSALANIMKDIGAS-E-- 238 (324)
T ss_dssp SCCEEEEEEEE-----TTEEEEECEEEETTEECCC---------CC-EEEEECTTCSSEEECTTTHHHHHHHHTCE-E--
T ss_pred CceEEEecCCC-----cEEEEEEeEEEECCceeec---------cC-ceEEEecCCccEECCHHHHHHHHHHhCCc-c--
Confidence 46789999752 4799999999999987531 12 67999999999999999999999887543 1
Q ss_pred CcccCCCCCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCCCeEEE-EEEeC
Q 046564 83 KMIGLAPLAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKRNVMCL-GFLDG 154 (160)
Q Consensus 83 ~~~~~~~~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~~~~CL-a~~~~ 154 (160)
... .-.-.|++.. .+|+|+|+|.| +.|+|++++|++.. +..|+ +|...
T Consensus 239 ----~~g-~~~~~C~~~~----------~~P~i~f~f~g-------~~~~i~~~~y~~~~--~~~C~~~~~~~ 287 (324)
T 1am5_A 239 ----NQG-EMMGNCASVQ----------SLPDITFTING-------VKQPLPPSAYIEGD--QAFCTSGLGSS 287 (324)
T ss_dssp ----CCC-CEECCTTSSS----------SSCCEEEEETT-------EEEEECHHHHEEES--SSCEEECEEEC
T ss_pred ----cCC-cEEEeCCCcc----------cCCcEEEEECC-------EEEEECHHHhcccC--CCeEEEEEEEC
Confidence 011 1124587642 47999999954 89999999999987 56899 68764
No 16
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=99.50 E-value=1.2e-13 Score=114.26 Aligned_cols=109 Identities=12% Similarity=0.178 Sum_probs=82.8
Q ss_pred CcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhcccC
Q 046564 4 LLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDKK 83 (160)
Q Consensus 4 ~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~~ 83 (160)
.+.|+|+... .+|+|.|++|+||++.+.. +..++||||||++++||+++|++|.+++.++
T Consensus 182 ~l~~~p~~~~-----~~~~v~l~~i~v~~~~~~~----------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~----- 241 (329)
T 1dpj_A 182 DITWLPVRRK-----AYWEVKFEGIGLGDEYAEL----------ESHGAAIDTGTSLITLPSGLAEMINAEIGAK----- 241 (329)
T ss_dssp EEEEEECSSB-----TTBEEEEEEEEETTEEEEC----------SSCEEEECTTCSCEEECHHHHHHHHHHHTCE-----
T ss_pred ceEEEEcCCC-----ceEEEEeeeEEECCeEecC----------CCccEEeeCCCCcEECCHHHHHHHHHHhCCc-----
Confidence 4678998742 4899999999999998752 2457999999999999999999998887422
Q ss_pred cccCCCCCCCc-ccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCCCeEEE-EEEeC
Q 046564 84 MIGLAPLAPFG-ARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKRNVMCL-GFLDG 154 (160)
Q Consensus 84 ~~~~~~~~~fd-lCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~~~~CL-a~~~~ 154 (160)
......+. .|... ..+|+|+|+|.| +.|.|++++|++... ..|+ +|...
T Consensus 242 ---~~~~g~~~~~C~~~----------~~~P~i~f~f~g-------~~~~i~~~~y~~~~~--~~C~~~~~~~ 292 (329)
T 1dpj_A 242 ---KGWTGQYTLDCNTR----------DNLPDLIFNFNG-------YNFTIGPYDYTLEVS--GSCISAITPM 292 (329)
T ss_dssp ---ECTTSSEEECGGGG----------GGCCCEEEEETT-------EEEEECTTTSEEEET--TEEEECEEEC
T ss_pred ---cCCCCeEEEECCCC----------CcCCcEEEEECC-------EEEEECHHHhEecCC--CEEEEEEEec
Confidence 11112222 36532 257999999976 799999999999875 4799 67754
No 17
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=99.49 E-value=4.6e-14 Score=116.82 Aligned_cols=114 Identities=14% Similarity=0.038 Sum_probs=82.6
Q ss_pred CCcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhccc
Q 046564 3 GLLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDK 82 (160)
Q Consensus 3 ~~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~ 82 (160)
..+.|||++.++ .+|+|+|.+|+||++.+. . ...++||||||++++||+++|+++.+++..+..
T Consensus 176 g~l~~~p~~~~~----~~w~v~l~~i~v~~~~~~--~--------~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~-- 239 (325)
T 1ibq_A 176 GSITYTDADSSQ----GYWGFSTDGYSIGDGSSS--S--------SGFSAIADTGTTLILLDDEIVSAYYEQVSGAQE-- 239 (325)
T ss_dssp SCCEEEECBCTT----SSCEEEECEEEETTSCCB--S--------CCEEEEECTTCCSEEECHHHHHHHHTTSTTCBC--
T ss_pred CceEEEEcCCCC----ceEEEEECcEEECCeecc--C--------CCceEEEeCCCCcEeCCHHHHHHHHHhCCCceE--
Confidence 468899997532 589999999999998653 1 235799999999999999999999887632211
Q ss_pred CcccCCCCCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeC--CCeEEEE-EEeC
Q 046564 83 KMIGLAPLAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIK--RNVMCLG-FLDG 154 (160)
Q Consensus 83 ~~~~~~~~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~--~~~~CLa-~~~~ 154 (160)
......-.+ .|+. .+|+|+|+| | |+.|.|++++|++... +...|++ |...
T Consensus 240 --~~~~g~~~~-~C~~------------~~P~i~f~f-g------g~~~~i~~~~~~~~~~~~~~~~C~~~i~~~ 292 (325)
T 1ibq_A 240 --SYEAGGYVF-SCST------------DLPDFTVVI-G------DYKAVVPGKYINYAPVSTGSSTCYGGIQSN 292 (325)
T ss_dssp --CSSSSSCEE-ETTC------------CCCCEEEEE-T------TEEEEECHHHHEEEESSTTCSEEEESEEEC
T ss_pred --cCcCCeEEE-EcCC------------CCCcEEEEE-C------CEEEEECHHHhcccccCCCCCeEEEEEEcC
Confidence 111111112 4872 369999999 4 4899999999988763 3379998 5554
No 18
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=99.49 E-value=5.7e-14 Score=116.23 Aligned_cols=108 Identities=13% Similarity=0.151 Sum_probs=83.1
Q ss_pred CCcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhccc
Q 046564 3 GLLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDK 82 (160)
Q Consensus 3 ~~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~ 82 (160)
..+.|||+..++ .+|+|.|.+|+||++ + +.. ..++||||||++++||+++|++++++|.+++..
T Consensus 181 g~l~~~p~~~~~----~~~~v~l~~i~vg~~-~--~~~--------~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~- 244 (325)
T 2apr_A 181 GSLTTVPIDNSR----GWWGITVDRATVGTS-T--VAS--------SFDGILDTGTTLLILPNNIAASVARAYGASDNG- 244 (325)
T ss_dssp SCCEEEECBCTT----SSCEEEECEEEETTE-E--EEC--------CEEEEECTTCSSEEEEHHHHHHHHHHHTCEECS-
T ss_pred CceEEEEccCCC----CEEEEEEeEEEECCE-e--cCC--------CceEEEecCCccEECCHHHHHHHHHHHhcccCC-
Confidence 468899997533 589999999999993 2 211 347999999999999999999999999876642
Q ss_pred CcccCCCCCCCc-ccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCCCeEEEEEE
Q 046564 83 KMIGLAPLAPFG-ARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKRNVMCLGFL 152 (160)
Q Consensus 83 ~~~~~~~~~~fd-lCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~~~~CLa~~ 152 (160)
. ..+. .|+.. .+|+|+|+|.| + .|.|++++|++... +..|++..
T Consensus 245 -~------g~~~~~C~~~-----------~~p~i~f~f~g------~-~~~ip~~~~~~~~~-~~~C~~~i 289 (325)
T 2apr_A 245 -D------GTYTISCDTS-----------AFKPLVFSING------A-SFQVSPDSLVFEEF-QGQCIAGF 289 (325)
T ss_dssp -S------SCEEECSCGG-----------GCCCEEEEETT------E-EEEECGGGGEEEEE-TTEEEESE
T ss_pred -C------CeEEEECCCC-----------CCCcEEEEECC------E-EEEECHHHEEEcCC-CCeEEEEE
Confidence 1 1222 48631 37999999988 4 99999999988655 67899853
No 19
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=99.47 E-value=5.1e-14 Score=116.58 Aligned_cols=112 Identities=10% Similarity=0.023 Sum_probs=81.7
Q ss_pred CcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhcccC
Q 046564 4 LLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDKK 83 (160)
Q Consensus 4 ~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~~ 83 (160)
.+.|||++.++ .+|+|+|.+|+||+ .+ +. ...++||||||++++||+++|+++.+++..+..
T Consensus 178 ~l~~~p~~~~~----~~w~v~l~~i~v~~-~~--~~--------~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~~--- 239 (323)
T 1izd_A 178 SITYTDVDNSQ----GFWGFTADGYSIGS-DS--SS--------DSITGIADTGTTLLLLDDSIVDAYYEQVNGASY--- 239 (323)
T ss_dssp EEEEEECBCTT----SSCEEEESEEEETT-EE--EC--------CCEEEEECTTCCSEEECHHHHHHHHTTSTTCEE---
T ss_pred ceEEEECCCCC----ceEEEEECeEEECC-cc--cC--------CCceEEEeCCCcceeCCHHHHHHHHHhCCCcEE---
Confidence 47899997533 57999999999999 43 21 134799999999999999999998877632111
Q ss_pred cccCCCCCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCCCeEEEE-EEeC
Q 046564 84 MIGLAPLAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKRNVMCLG-FLDG 154 (160)
Q Consensus 84 ~~~~~~~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~~~~CLa-~~~~ 154 (160)
......-.++ |++ .+|+|+|+| | |++|.|++++|++...++..|++ |...
T Consensus 240 -~~~~g~~~~~-C~~------------~~P~i~f~f-g------g~~~~i~~~~~~~~~~~~~~C~~~i~~~ 290 (323)
T 1izd_A 240 -DSSQGGYVFP-SSA------------SLPDFSVTI-G------DYTATVPGEYISFADVGNGQTFGGIQSN 290 (323)
T ss_dssp -ETTTTEEEEE-TTC------------CCCCEEEEE-T------TEEEEECHHHHEEEECSTTEEEESEEEC
T ss_pred -cCcCCEEEEE-CCC------------CCceEEEEE-C------CEEEecCHHHeEEecCCCCeEEEEEEcC
Confidence 1111111123 862 379999999 4 48999999999988766678998 6654
No 20
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=99.45 E-value=9.9e-14 Score=114.03 Aligned_cols=110 Identities=15% Similarity=0.137 Sum_probs=82.8
Q ss_pred CcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhcccC
Q 046564 4 LLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDKK 83 (160)
Q Consensus 4 ~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~~ 83 (160)
.+.|+|+... .+|.|+|.+|+||++.+..+ +..++||||||++++||+++|+++.+++.+...
T Consensus 176 ~l~~~p~~~~-----~~w~v~l~~i~v~~~~~~~~---------~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~--- 238 (320)
T 4aa9_A 176 SLHWVPVTLQ-----QYWQFTVDSVTINGVAVACV---------GGCQAILDTGTSVLFGPSSDILKIQMAIGATEN--- 238 (320)
T ss_dssp EEEEEECSSB-----TTBEEEECEEEETTEEEEST---------TCEEEEECTTCSSEEEEHHHHHHHHHHTTCEEC---
T ss_pred ceEEEEcccC-----CceEEEEeEEEECCEEeccC---------CCcEEEEECCCCcEECCHHHHHHHHHHhCCccc---
Confidence 4688998642 47999999999999987643 235799999999999999999999888742211
Q ss_pred cccCCCCCC-CcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCCCeEEEE-EEeC
Q 046564 84 MIGLAPLAP-FGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKRNVMCLG-FLDG 154 (160)
Q Consensus 84 ~~~~~~~~~-fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~~~~CLa-~~~~ 154 (160)
.... .-.|.+.. .+|+|+|+|.| +.|.|++++|+.. ++..|+. |...
T Consensus 239 -----~~g~~~~~C~~~~----------~~p~i~f~f~g-------~~~~l~~~~y~~~--~~~~C~~~i~~~ 287 (320)
T 4aa9_A 239 -----RYGEFDVNCGNLR----------SMPTVVFEING-------RDYPLSPSAYTSK--DQGFCTSGFQGD 287 (320)
T ss_dssp -----TTSCEEECGGGGG----------GCCCEEEEETT-------EEEEECHHHHEEE--ETTEEEESEEEE
T ss_pred -----CCCcEEEeCCCCC----------cCceEEEEECC-------EEEEECHHHhccC--CCCeEEEEEEcC
Confidence 1111 12477542 47999999965 8999999999976 4568994 7653
No 21
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=99.44 E-value=2e-13 Score=115.50 Aligned_cols=110 Identities=14% Similarity=0.146 Sum_probs=84.8
Q ss_pred CcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhcccC
Q 046564 4 LLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDKK 83 (160)
Q Consensus 4 ~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~~ 83 (160)
.+.|||+... .+|.|.|. |+|||+.+ +..++||||||++++||+++|+++.+++.++..
T Consensus 229 ~l~~~p~~~~-----~~w~v~l~-i~v~g~~~------------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~--- 287 (375)
T 1miq_A 229 NITYEKLNHD-----LYWQIDLD-VHFGKQTM------------EKANVIVDSGTTTITAPSEFLNKFFANLNVIKV--- 287 (375)
T ss_dssp EEEEEEBSSS-----SSSEEEEE-EEETTEEE------------EEEEEEECTTBSSEEECHHHHHHHHHHHTCEEC---
T ss_pred ceEEEecCCC-----ceEEEEEE-EEECCEEc------------ccceEEecCCCccEEcCHHHHHHHHHHhCCccc---
Confidence 4788998641 58999999 99999986 135799999999999999999999998854321
Q ss_pred cccCCCCCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeC--CCeEEE-EEEeCC
Q 046564 84 MIGLAPLAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIK--RNVMCL-GFLDGG 155 (160)
Q Consensus 84 ~~~~~~~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~--~~~~CL-a~~~~~ 155 (160)
.... .-+..|++ . .+|+|+|+|.| +.|.|++++|++... ++..|+ +|+..+
T Consensus 288 --~~~g-~~~~~C~~-~----------~~P~i~f~f~g-------~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~ 341 (375)
T 1miq_A 288 --PFLP-FYVTTCDN-K----------EMPTLEFKSAN-------NTYTLEPEYYMNPILEVDDTLCMITMLPVD 341 (375)
T ss_dssp --TTSS-CEEEETTC-T----------TCCCEEEECSS-------CEEEECGGGSEEESSSSSCSEEEESEEECC
T ss_pred --CCCC-eEEEECCC-C----------CCCcEEEEECC-------EEEEECHHHhEeeccCCCCCeEEEEEEECC
Confidence 1111 12346986 1 37999999954 899999999999875 357898 888765
No 22
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=99.44 E-value=1.1e-13 Score=114.66 Aligned_cols=113 Identities=11% Similarity=0.053 Sum_probs=82.6
Q ss_pred CCcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhccc
Q 046564 3 GLLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDK 82 (160)
Q Consensus 3 ~~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~ 82 (160)
..+.|||++.++ .+|+|+|.+|+||++.+.. ...++||||||++++||+++|+++.+++..+..
T Consensus 180 g~l~~~p~~~~~----~~~~v~l~~i~v~~~~~~~----------~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~~-- 243 (329)
T 1oew_A 180 GSITYTAVSTKQ----GFWEWTSTGYAVGSGTFKS----------TSIDGIADTGTTLLYLPATVVSAYWAQVSGAKS-- 243 (329)
T ss_dssp SCCEEEECBCTT----SSCEEEEEEEEETTSCCEE----------EEEEEEECTTCCSEEECHHHHHHHHTTSTTCEE--
T ss_pred cceEEEEccCCC----ceEEEEEeeEEECCeeccC----------CCceEEEeCCCCCEECCHHHHHHHHHhCCCcEE--
Confidence 468899998543 5899999999999986531 124799999999999999999998776632211
Q ss_pred CcccCCCCCCC-cccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEe-C-CCeEEEE-EEeC
Q 046564 83 KMIGLAPLAPF-GARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARI-K-RNVMCLG-FLDG 154 (160)
Q Consensus 83 ~~~~~~~~~~f-dlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~-~-~~~~CLa-~~~~ 154 (160)
. .....+ -.|+. .+|+|+|+| | |+.|.|++++|++.. + +...|++ |...
T Consensus 244 --~--~~~g~~~~~C~~------------~~P~i~f~f-g------g~~~~ip~~~~~~~~~~~~~~~C~~~i~~~ 296 (329)
T 1oew_A 244 --S--SSVGGYVFPCSA------------TLPSFTFGV-G------SARIVIPGDYIDFGPISTGSSSCFGGIQSS 296 (329)
T ss_dssp --E--TTTTEEEEETTC------------CCCCEEEEE-T------TEEEEECHHHHEEEESSTTCSEEEESEEES
T ss_pred --c--CCCCEEEEECCC------------CCCcEEEEE-C------CEEEEECHHHeeeeecCCCCCeEEEEEEeC
Confidence 1 111122 35872 379999999 5 589999999998876 3 2479998 5544
No 23
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=99.43 E-value=3.5e-13 Score=111.54 Aligned_cols=114 Identities=18% Similarity=0.176 Sum_probs=86.3
Q ss_pred CCcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhccc
Q 046564 3 GLLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDK 82 (160)
Q Consensus 3 ~~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~ 82 (160)
..+.|+|+..+ .+|+|+|.+|+|+|+.++.. .++||||||++++||+++|+++.+++.++...
T Consensus 184 g~l~~~p~~~~-----~~~~v~l~~i~v~g~~~~~~-----------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~- 246 (339)
T 3fv3_A 184 GKLVAEQVTSS-----QALTISLASVNLKGSSFSFG-----------DGALLDSGTTLTYFPSDFAAQLADKAGARLVQ- 246 (339)
T ss_dssp SCCEEEEBCCS-----SSCEEEEEEEEESSCEEEEE-----------EEEEECTTBSSEEECHHHHHHHHHHHTCEEEE-
T ss_pred cceEEEecccC-----ccEEEEEEEEEECCEeecCC-----------ccEEEeCCCCCEecCHHHHHHHHHHcCCEEcc-
Confidence 46789998753 37999999999999987642 46999999999999999999999999744321
Q ss_pred CcccCCCCCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCCCeEE-EEEEe
Q 046564 83 KMIGLAPLAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKRNVMC-LGFLD 153 (160)
Q Consensus 83 ~~~~~~~~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~~~~C-La~~~ 153 (160)
.+.... .-.-.|+.. ..|+|+|+|.+ |+.+.|++++|++...++ .| ++|.+
T Consensus 247 -~~~~~~-~~~~~C~~~-----------~~p~i~f~f~~------g~~~~v~~~~~~~~~~~~-~C~~~i~~ 298 (339)
T 3fv3_A 247 -VARDQY-LYFIDCNTD-----------TSGTTVFNFGN------GAKITVPNTEYVYQNGDG-TCLWGIQP 298 (339)
T ss_dssp -EETTEE-EEEECTTCC-----------CCSEEEEEETT------SCEEEEEGGGGEEECSSS-CEEESEEE
T ss_pred -ccccCc-eEEEecCCC-----------CCCcEEEEECC------CCEEEECHHHheeeCCCC-eEEEEEEe
Confidence 000111 112368751 37999999986 589999999999887554 57 78876
No 24
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=99.43 E-value=3.2e-13 Score=118.01 Aligned_cols=60 Identities=15% Similarity=0.162 Sum_probs=50.4
Q ss_pred CcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHH
Q 046564 4 LLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFA 76 (160)
Q Consensus 4 ~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~ 76 (160)
.+.|||+... .+|+|+|.+|+|||+.+.++. +..++||||||++++||+++|++|.+++.
T Consensus 221 ~l~~~pv~~~-----~~w~v~l~~i~v~g~~~~~~~--------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~ 280 (478)
T 1qdm_A 221 EHTYVPVTQK-----GYWQFDMGDVLVGGKSTGFCA--------GGCAAIADSGTSLLAGPTAIITEINEKIG 280 (478)
T ss_dssp EEEEEEEEEE-----TTEEEEECCEEETTEECSTTT--------TCEEEEECSSCCSEEECHHHHHHHHHHHT
T ss_pred CceEEeccCC-----CeEEEEEeEEEECCEEEeecC--------CCceEEEcCCCCceeCCHHHHHHHHHHhC
Confidence 4678998742 489999999999999876532 24679999999999999999999999884
No 25
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=99.43 E-value=2.2e-13 Score=112.88 Aligned_cols=113 Identities=12% Similarity=0.096 Sum_probs=82.8
Q ss_pred CCcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhccc
Q 046564 3 GLLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDK 82 (160)
Q Consensus 3 ~~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~ 82 (160)
..+.|||++.++ .+|+|+|.+|+||++.+. . ...++||||||++++||+++|+++.+++..+..
T Consensus 181 g~l~~~p~~~~~----~~~~v~l~~i~v~~~~~~--~--------~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~-- 244 (329)
T 3c9x_A 181 GPVAYTPVDNSQ----GFWEFTASGYSVGGGKLN--R--------NSIDGIADTGTTLLLLDDNVVDAYYANVQSAQY-- 244 (329)
T ss_dssp SCEEEEECBCTT----SSCEEEECCEEETTCCCC--S--------CCEEEEECTTCCSEEECHHHHHHHHTTCTTCEE--
T ss_pred cceEEEEccCCC----ceEEEEEeeEEECCEecc--C--------CCceEEEECCCCcEeCCHHHHHHHHHhCCCcEE--
Confidence 467899998533 589999999999998653 1 134799999999999999999988776632211
Q ss_pred CcccCCCCCCC-cccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeC-C-CeEEEE-EEeC
Q 046564 83 KMIGLAPLAPF-GARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIK-R-NVMCLG-FLDG 154 (160)
Q Consensus 83 ~~~~~~~~~~f-dlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~-~-~~~CLa-~~~~ 154 (160)
. .....+ -.|+. .+|+|+|+|.| +.|.|++++|++... + ...|++ |...
T Consensus 245 --~--~~~~~~~~~C~~------------~~P~i~f~f~g-------~~~~ip~~~~~~~~~~~~~~~C~~~i~~~ 297 (329)
T 3c9x_A 245 --D--NQQEGVVFDCDE------------DLPSFSFGVGS-------STITIPGDLLNLTPLEEGSSTCFGGLQSS 297 (329)
T ss_dssp --E--TTTTEEEEETTC------------CCCCEEEEETT-------EEEEECGGGGEEEESSTTCSEEEESEEEC
T ss_pred --c--CCCCEEEEECCC------------CCCcEEEEECC-------EEEEECHHHeeeeccCCCCCeEEEEEEcC
Confidence 1 111222 24871 37999999975 899999999988763 2 479998 5554
No 26
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=99.43 E-value=2e-13 Score=113.27 Aligned_cols=110 Identities=16% Similarity=0.227 Sum_probs=81.6
Q ss_pred CcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhcccC
Q 046564 4 LLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDKK 83 (160)
Q Consensus 4 ~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~~ 83 (160)
.+.|+|+.. + .+|.|+|.+|+||++.+. . ...++||||||++++||+++|++|.+++.++..
T Consensus 183 ~l~~~p~~~----~-~~w~v~l~~i~v~~~~~~-~---------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~--- 244 (330)
T 1yg9_A 183 EFTYVPLVG----D-DSWKFRLDGVKIGDTTVA-P---------AGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVE--- 244 (330)
T ss_dssp EEEEEEBSC----T-TSCCEECSEEEETTEEEE-C---------TTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEE---
T ss_pred ceEEEECCC----C-CEEEEEeCeEEECCEEEc-C---------CCcEEEEecCCccccCCHHHHHHHHHHhCCccc---
Confidence 478999872 2 578999999999999864 1 135799999999999999999999998743211
Q ss_pred cccCCC-CC-CCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCCCeEEE-EEEe
Q 046564 84 MIGLAP-LA-PFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKRNVMCL-GFLD 153 (160)
Q Consensus 84 ~~~~~~-~~-~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~~~~CL-a~~~ 153 (160)
.... .- .+ .|++.. .+|+|+|+|. |+.|.|++++|++.. +..|+ +|..
T Consensus 245 --~~g~~~~~~~-~C~~~~----------~~p~i~f~fg-------g~~~~l~~~~y~~~~--~~~C~~~i~~ 295 (330)
T 1yg9_A 245 --KTTTRRICKL-DCSKIP----------SLPDVTFVIN-------GRNFNISSQYYIQQN--GNLCYSGFQP 295 (330)
T ss_dssp --ECSSCEEEEE-CGGGGG----------GSCCEEEEET-------TEEEEECHHHHEEEE--TTEEEESEEE
T ss_pred --CCCceEEEEE-ECCCcc----------ccCcEEEEEC-------CEEEEECHHHhcccC--CCcEEEEEEe
Confidence 0000 01 12 276431 4799999994 489999999999987 56899 6765
No 27
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=99.42 E-value=2.1e-13 Score=112.73 Aligned_cols=112 Identities=13% Similarity=0.043 Sum_probs=80.9
Q ss_pred CCcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhccc
Q 046564 3 GLLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDK 82 (160)
Q Consensus 3 ~~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~ 82 (160)
..+.|||++.++ .+|+|+|.+|+||+ + .. ...++||||||++++||+++|+++.+++..+..
T Consensus 177 g~l~~~p~~~~~----~~w~v~l~~i~v~~--~--~~--------~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~-- 238 (323)
T 1bxo_A 177 GSLTYTGVDNSQ----GFWSFNVDSYTAGS--Q--SG--------DGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQ-- 238 (323)
T ss_dssp SCCEEEECBCTT----SSCEEEEEEEEETT--E--EE--------EEEEEEECTTCSSEEECHHHHHHHHTTSTTCEE--
T ss_pred CceEEEECCCCC----CeEEEEEeeEEECC--c--cC--------CCceEEEeCCCCceeCCHHHHHHHHHhCCCceE--
Confidence 468899998543 57999999999999 2 11 134799999999999999999999887632211
Q ss_pred CcccCCCCCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCC-CeEEEE-EEeC
Q 046564 83 KMIGLAPLAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKR-NVMCLG-FLDG 154 (160)
Q Consensus 83 ~~~~~~~~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~-~~~CLa-~~~~ 154 (160)
......-.+ .|+. .+|+|+|+| | |+.+.|++++|++...+ +..|++ |...
T Consensus 239 --~~~~g~~~~-~C~~------------~~P~i~f~f-g------g~~~~l~~~~~~~~~~~~~~~C~~~i~~~ 290 (323)
T 1bxo_A 239 --DSNAGGYVF-DCST------------NLPDFSVSI-S------GYTATVPGSLINYGPSGDGSTCLGGIQSN 290 (323)
T ss_dssp --ETTTTEEEE-CTTC------------CCCCEEEEE-T------TEEEEECHHHHEEEECSSSSCEEESEEEC
T ss_pred --cCcCCEEEE-ECCC------------CCceEEEEE-C------CEEEEECHHHeEEeccCCCCeEEEEEECC
Confidence 111111112 3872 369999999 4 48999999999887643 478998 6654
No 28
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=99.41 E-value=3.2e-13 Score=111.82 Aligned_cols=114 Identities=18% Similarity=0.174 Sum_probs=81.7
Q ss_pred CCcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhccc
Q 046564 3 GLLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDK 82 (160)
Q Consensus 3 ~~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~ 82 (160)
+.+.|+|++.+ .+|.|+|.+|+|+++.+..+ ..++||||||++++||+++|+++.+++.++...
T Consensus 181 g~l~~~p~~~~-----~~~~v~l~~i~v~g~~~~~~----------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~- 244 (342)
T 3pvk_A 181 GSLIALPVTSD-----RELRISLGSVEVSGKTINTD----------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQ- 244 (342)
T ss_dssp SCCEEEECCCS-----SSCEEEEEEEEETTEEEEEE----------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEE-
T ss_pred eeeEEeecCcc-----ceEEEEEeEEEECCEEecCC----------CceEEEeCCCCCeecCHHHHHHHHHHcCCeecc-
Confidence 46789998754 37999999999999988753 246999999999999999999999888544321
Q ss_pred CcccCCCCCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeC--CC---eEEEEEEe
Q 046564 83 KMIGLAPLAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIK--RN---VMCLGFLD 153 (160)
Q Consensus 83 ~~~~~~~~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~--~~---~~CLa~~~ 153 (160)
.......-...|+ ..|+|+|+|.+ |+.+.|++++|++... ++ ..|++...
T Consensus 245 --~~~~~~~~~~~C~-------------~~p~i~f~f~~------g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~ 299 (342)
T 3pvk_A 245 --DSNGNSFYEVDCN-------------LSGDVVFNFSK------NAKISVPASEFAASLQGDDGQPYDKCQLLFD 299 (342)
T ss_dssp --CTTSCEEEEECSC-------------CCSEEEEEEST------TCEEEEEGGGGEEC----------CEEESEE
T ss_pred --cCCCceEEEEecC-------------CCCceEEEECC------CCEEEEcHHHheeeccccCCCcCCeeEEEEe
Confidence 1100000123465 24999999997 5899999999998742 33 68986443
No 29
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=99.40 E-value=2.2e-13 Score=115.88 Aligned_cols=112 Identities=14% Similarity=0.119 Sum_probs=84.1
Q ss_pred CcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhcccC
Q 046564 4 LLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDKK 83 (160)
Q Consensus 4 ~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~~ 83 (160)
.+.|+|+... .+|.|+|.+|+||++.+.. .+..++||||||++++||+++|+++.+++.+..
T Consensus 232 ~l~~~pv~~~-----~~w~v~l~~i~v~~~~~~~---------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~---- 293 (383)
T 2x0b_A 232 NFHYINLIKT-----GVWQIQMKGVSVGSSTLLC---------EDGCLALVDTGASYISGSTSSIEKLMEALGAKK---- 293 (383)
T ss_dssp EEEEEEBSST-----TSCEEEECEEEESSCCCBS---------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE----
T ss_pred ceEEEEcCCC-----ceEEEEEeEEEeCCceEEc---------CCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc----
Confidence 4788998742 4899999999999986421 224579999999999999999999988874221
Q ss_pred cccCCCCCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCC--CeEEE-EEEeC
Q 046564 84 MIGLAPLAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKR--NVMCL-GFLDG 154 (160)
Q Consensus 84 ~~~~~~~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~--~~~CL-a~~~~ 154 (160)
..... .-.|++.+ .+|+|+|+|.| ..|.|++++|++.... +..|+ +|...
T Consensus 294 ---~~g~~-~v~C~~~~----------~~P~i~f~~~g-------~~~~l~~~~yi~~~~~~~~~~C~~~~~~~ 346 (383)
T 2x0b_A 294 ---RLFDY-VVKCNEGP----------TLPDISFHLGG-------KEYTLTSADYVFQESYSSKKLCTLAIHAM 346 (383)
T ss_dssp ---CSSCE-EEEGGGTT----------TCCCEEEEETT-------EEEEECHHHHBCCCCCCTTSEEEBSEEEC
T ss_pred ---cCCcE-EEeccccc----------cCceEEEEECC-------EEEEECHHHhEeeccCCCCCeEEEEEEec
Confidence 11111 12498642 47999999965 8999999999988753 56899 68764
No 30
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=99.34 E-value=8.9e-13 Score=109.08 Aligned_cols=111 Identities=15% Similarity=0.188 Sum_probs=82.8
Q ss_pred CcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhcccC
Q 046564 4 LLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDKK 83 (160)
Q Consensus 4 ~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~~ 83 (160)
.+.|+|+.. + .+|+|.|.+|+||++.+..+. ..++||||||++++||+++|+++.+++.+...
T Consensus 189 ~l~~~p~~~----~-~~w~v~l~~i~v~~~~~~~~~---------~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~--- 251 (341)
T 3k1w_A 189 NFHYINLIK----T-GVWQIQMKGVSVGSSTLLCED---------GCLALVDTGASYISGSTSSIEKLMEALGAKKR--- 251 (341)
T ss_dssp EEEEEECSS----T-TSCEEEECCEEETTEEEECTT---------CEEEEECTTCSSEEECHHHHHHHHHHHTCEEC---
T ss_pred ceEEEecCC----C-CEEEEEEeEEEECCEEeecCC---------CCEEEEECCCChhcCCHHHHHHHHHHcCCeec---
Confidence 467899873 1 589999999999999754322 35799999999999999999999988742211
Q ss_pred cccCCCCCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeC--CCeEEE-EEEe
Q 046564 84 MIGLAPLAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIK--RNVMCL-GFLD 153 (160)
Q Consensus 84 ~~~~~~~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~--~~~~CL-a~~~ 153 (160)
.. .-.-.|... ..+|+|+|+|.| +.+.|++++|++... ++..|+ +|..
T Consensus 252 ---~~--g~~~~C~~~----------~~~p~i~f~f~g-------~~~~l~~~~~~~~~~~~~~~~C~~~i~~ 302 (341)
T 3k1w_A 252 ---LF--DYVVKCNEG----------PTLPDISFHLGG-------KEYTLTSADYVFQESYSSKKLCTLAIHA 302 (341)
T ss_dssp ---SS--CEEEEGGGG----------GGCCCEEEEETT-------EEEEECHHHHBCCSCCCTTSEEEBSEEE
T ss_pred ---CC--CeEEeCCCC----------CcCCcEEEEECC-------EEEEECHHHheeEccCCCCCeEEeEEEe
Confidence 11 111126542 147999999976 899999999998764 367999 4665
No 31
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=99.33 E-value=1.9e-12 Score=109.34 Aligned_cols=110 Identities=15% Similarity=0.224 Sum_probs=81.7
Q ss_pred CCcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhccc
Q 046564 3 GLLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDK 82 (160)
Q Consensus 3 ~~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~ 82 (160)
+.+.|+|+... .+|.|+|.+|+||++.+... +..++||||||++++||+++|+++.+++.+..
T Consensus 221 g~l~~~pv~~~-----~~w~v~l~~i~v~g~~~~~~---------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~--- 283 (370)
T 3psg_A 221 GSLNWVPVSVE-----GYWQITLDSITMDGETIACS---------GGCQAIVDTGTSLLTGPTSAIANIQSDIGASE--- 283 (370)
T ss_dssp SCCEEEECSEE-----TTEEEEECEEESSSSEEECT---------TCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE---
T ss_pred Ccceeeccccc-----ceeEEEEeEEEECCEEEecC---------CCceEEEcCCCCcEECCHHHHHHHHHHhCCcc---
Confidence 56889998753 47999999999999877532 23579999999999999999999987773221
Q ss_pred CcccCCCCCC-CcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeCCCeEEEE-EEe
Q 046564 83 KMIGLAPLAP-FGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIKRNVMCLG-FLD 153 (160)
Q Consensus 83 ~~~~~~~~~~-fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~~~~CLa-~~~ 153 (160)
..... .-.|... ..+|+|+|+|.| ..+.|++++|++. .++ .|+. |..
T Consensus 284 -----~~~g~~~v~C~~~----------~~lP~i~f~~~g-------~~~~l~~~~yi~~-~~~-~C~~~~~~ 332 (370)
T 3psg_A 284 -----NSDGEMVISCSSI----------DSLPDIVFTIDG-------VQYPLSPSAYILQ-DDD-SCTSGFEG 332 (370)
T ss_dssp -----CTTCCEECCGGGG----------GGCCCEEEEETT-------EEEEECHHHHEEE-CSS-CEEESEEE
T ss_pred -----cCCCcEEEECCCc----------ccCCcEEEEECC-------EEEEECHHHhccc-CCC-EEEEEEEe
Confidence 11111 1236543 147999999965 8999999999998 444 5995 654
No 32
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=99.32 E-value=1.8e-12 Score=107.59 Aligned_cols=114 Identities=14% Similarity=0.086 Sum_probs=81.8
Q ss_pred CCcccccCcccCCCCCcceEEEeEEEEECC-EEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhcc
Q 046564 3 GLLIKIPLISTLAFRSDDYFINLKSIKVDG-KVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFD 81 (160)
Q Consensus 3 ~~~~~TPL~~~~~~~s~~YyV~l~gIsVgg-~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~ 81 (160)
..+.|||++.++... .+|.|. .+|+|++ +.+.. .+++||||||++++||+++|+++.+++.++..
T Consensus 172 g~l~~~p~~~~~~~~-~~w~v~-~~i~v~~~~~l~~-----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~- 237 (340)
T 1wkr_A 172 GSITYTPITSTSPAS-AYWGIN-QSIRYGSSTSILS-----------STAGIVDTGTTLTLIASDAFAKYKKATGAVAD- 237 (340)
T ss_dssp SCCEEEECCSSTTGG-GSSEEE-EEEEETTTEEEEE-----------EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC-
T ss_pred cceEEEECccCCCCc-ceEEEE-eeEEECCCeEccC-----------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc-
Confidence 468899999875333 578899 9999999 87641 24799999999999999999999887754322
Q ss_pred cCcccCCCCCC-CcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeC--------CCeEEEEEE
Q 046564 82 KKMIGLAPLAP-FGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIK--------RNVMCLGFL 152 (160)
Q Consensus 82 ~~~~~~~~~~~-fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~--------~~~~CLa~~ 152 (160)
..... .-.|.+.. .+|+|+|+|.| ..|.|++++|+++.. .+.-|++|.
T Consensus 238 ------~~~g~~~~~C~~~~----------~~p~i~f~f~g-------~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~ 294 (340)
T 1wkr_A 238 ------NNTGLLRLTTAQYA----------NLQSLFFTIGG-------QTFELTANAQIWPRNLNTAIGGSASSVYLIVG 294 (340)
T ss_dssp ------TTTSSEEECHHHHH----------TCCCEEEEETT-------EEEEECTGGGBCCGGGGGGGTCCSSCEEBCEE
T ss_pred ------CCCCeEEeeccccc----------cCCcEEEEECC-------EEEEEcHHHhccccccccccCCCCceEEEEEe
Confidence 00111 11365421 47999999965 799999999997653 123345776
Q ss_pred e
Q 046564 153 D 153 (160)
Q Consensus 153 ~ 153 (160)
.
T Consensus 295 ~ 295 (340)
T 1wkr_A 295 D 295 (340)
T ss_dssp E
T ss_pred c
Confidence 5
No 33
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=99.28 E-value=1.5e-12 Score=113.27 Aligned_cols=110 Identities=11% Similarity=0.066 Sum_probs=82.0
Q ss_pred CcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhcccC
Q 046564 4 LLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDKK 83 (160)
Q Consensus 4 ~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~~ 83 (160)
.+.|||+... .+|.|.|. |+|||+ + + +..++||||||++++||+++|+++.+++.+.
T Consensus 305 ~l~~~pv~~~-----~~w~V~l~-I~Vgg~-~-~----------~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~----- 361 (453)
T 2bju_A 305 PLTYEKLNHD-----LYWQITLD-AHVGNI-M-L----------EKANCIVDSGTSAITVPTDFLNKMLQNLDVI----- 361 (453)
T ss_dssp EEEEEEEEEE-----TTEEEEEE-EEETTE-E-E----------EEEEEEECTTCCSEEECHHHHHHHTTTSSCE-----
T ss_pred ceEEEecCCC-----ceEEEEEE-EEECcE-E-e----------ccccEEEcCCCCeEecCHHHHHHHHHHhCCc-----
Confidence 4789999752 47999999 999993 3 1 2357999999999999999999998776421
Q ss_pred cccCCCCCCCcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeC--CCeEEE-EEEeCC
Q 046564 84 MIGLAPLAPFGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIK--RNVMCL-GFLDGG 155 (160)
Q Consensus 84 ~~~~~~~~~fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~--~~~~CL-a~~~~~ 155 (160)
+......-...|++ . .+|+|+|+|.| +.|.|++++|++... ++..|+ +|.+.+
T Consensus 362 -~~~~g~~~~v~C~~-~----------~~P~itf~fgg-------~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~ 417 (453)
T 2bju_A 362 -KVPFLPFYVTLCNN-S----------KLPTFEFTSEN-------GKYTLEPEYYLQHIEDVGPGLCMLNIIGLD 417 (453)
T ss_dssp -ECTTSSCEEEETTC-T----------TCCCEEEECSS-------CEEEECHHHHEEECTTTSTTEEEECEEECC
T ss_pred -ccCCCceEEEecCC-C----------CCCcEEEEECC-------EEEEECHHHhEeecccCCCceEEEEEEeCC
Confidence 11111012346876 1 47999999954 899999999999886 357998 677654
No 34
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=99.05 E-value=1.1e-10 Score=101.29 Aligned_cols=109 Identities=8% Similarity=0.101 Sum_probs=79.1
Q ss_pred CcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHHHHhcccC
Q 046564 4 LLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFAKRAFDKK 83 (160)
Q Consensus 4 ~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~~~~~~~~ 83 (160)
.+.|+|+.. + .+|.|+|. |+||++ . .....+||||||++++||+++|+++.+++.+..
T Consensus 304 ~l~~~pv~~----~-~~w~v~l~-I~Vgg~-~-----------~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~---- 361 (451)
T 3qvc_A 304 PLNYEKLNH----D-LMWQVDLD-VHFGNV-S-----------SKKANVILDSATSVITVPTEFFNQFVESASVFK---- 361 (451)
T ss_dssp EEEEEECSS----T-TSSEEEEE-EEETTE-E-----------EEEEEEEECTTBSSEEECHHHHHHHHTTTTCEE----
T ss_pred ceEEEEccc----C-CeeEEEEE-EEECCc-c-----------CCCceEEEeCCCccccCCHHHHHHHHHHcCCee----
Confidence 478999873 1 57999999 999998 1 113579999999999999999999987773221
Q ss_pred cccCCCCCC-CcccccccCCCccCCCCCCcCeEEEEEcCCCCCCCceEEEEecCceEEEeC--CCeEEEE-EEeCC
Q 046564 84 MIGLAPLAP-FGARFNTKNVATTKNAGPAVPTMDLELRGIGNSSSNTYWRICGANSMARIK--RNVMCLG-FLDGG 155 (160)
Q Consensus 84 ~~~~~~~~~-fdlCy~~s~~~~~~~~~~~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~--~~~~CLa-~~~~~ 155 (160)
.+.... .-.|. . ..+|+|+|+|.| ..+.|++++|++... ++..|+. |...+
T Consensus 362 ---~~~~g~y~v~C~-~----------~~~P~itf~fgg-------~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~ 416 (451)
T 3qvc_A 362 ---VPFLSLYVTTCG-N----------TKLPTLEYRSPN-------KVYTLEPKQYLEPLENIFSALCMLNIVPID 416 (451)
T ss_dssp ---CTTSSCEEEETT-C----------TTCCCEEEEETT-------EEEEECHHHHEEECTTTSTTEEEECEEECC
T ss_pred ---cCCCCeEEeeCC-c----------CcCCcEEEEECC-------EEEEEcHHHheeecccCCCCeEEEEEEeCC
Confidence 111111 12465 1 147999999976 899999999999875 3467985 65543
No 35
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=98.78 E-value=4.3e-09 Score=83.58 Aligned_cols=60 Identities=12% Similarity=0.046 Sum_probs=50.0
Q ss_pred CcccccCcccCCCCCcceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHHHHHHH
Q 046564 4 LLIKIPLISTLAFRSDDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNALAKDFA 76 (160)
Q Consensus 4 ~~~~TPL~~~~~~~s~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l~~a~~ 76 (160)
.+.|+|+... .+|+|+|.+|+||++.+.+.. +..++||||||++++||+++|+++.+++.
T Consensus 178 ~l~~~p~~~~-----~~~~v~l~~i~v~~~~~~~~~--------~~~~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 178 DHTYVPVTYQ-----YYWQFGIGDVLIGDKSTGFCA--------PGCQAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp EEEEEEEEEE-----TTEEEEECCEEETTEECCTTT--------TCEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred ceEEEEcccC-----CeEEEEeeEEEECCEEecccC--------CCCEEEEecCcchhhCCHHHHHHHHHHhC
Confidence 4678998753 479999999999999876542 23579999999999999999999998874
No 36
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=95.88 E-value=0.0085 Score=39.80 Aligned_cols=37 Identities=14% Similarity=0.483 Sum_probs=30.3
Q ss_pred CcCeEEEEEcCCCCCCCceEEEEecCceEEEeCC--CeEEE-EEEeC
Q 046564 111 AVPTMDLELRGIGNSSSNTYWRICGANSMARIKR--NVMCL-GFLDG 154 (160)
Q Consensus 111 ~vP~v~l~F~g~~~~~~g~~~~l~~~n~~~~~~~--~~~CL-a~~~~ 154 (160)
.+|+|+|+|.| +.+.|++++|++.... +..|+ +|+..
T Consensus 12 ~~P~i~f~~gg-------~~~~l~~~~yi~~~~~~~~~~C~~~~~~~ 51 (87)
T 1b5f_B 12 SMPNVSFTIGG-------KKFGLTPEQYILKVGKGEATQCISGFTAM 51 (87)
T ss_dssp GCCCEEEEETT-------EEEEECHHHHEEEESCTTTCEEEESEEEC
T ss_pred cCCcEEEEECC-------EEEEECHHHhEEEccCCCCCEEEEEEEEC
Confidence 47999999954 8999999999998753 47899 47754
No 37
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=80.96 E-value=1.8 Score=31.54 Aligned_cols=35 Identities=20% Similarity=0.269 Sum_probs=27.8
Q ss_pred cceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHHHH
Q 046564 19 DDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYNAL 71 (160)
Q Consensus 19 ~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~~l 71 (160)
..|||+.+ |+|+++. ++||||.+.|.+..+..+.+
T Consensus 23 ~~l~v~~~---Ing~~v~---------------~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 23 TMLYINCK---VNGHPLK---------------AFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp CCCEEEEE---ETTEEEE---------------EEECTTCSSCEEEHHHHHHT
T ss_pred CEEEEEEE---ECCEEEE---------------EEEeCCCCcEeeCHHHHHHc
Confidence 46888776 8999764 78999999999998665554
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=75.30 E-value=4.1 Score=28.84 Aligned_cols=33 Identities=18% Similarity=0.272 Sum_probs=25.3
Q ss_pred cceEEEeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechHHHH
Q 046564 19 DDYFINLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSAIYN 69 (160)
Q Consensus 19 ~~YyV~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~~Y~ 69 (160)
..|||. +.|+|+++. .+||||.+.|.+..+.-+
T Consensus 25 ~~~~v~---v~InG~~~~---------------~LvDTGAs~s~is~~~a~ 57 (148)
T 2i1a_A 25 PMLYIN---IEINNYPVK---------------AFVDTGAQTTIMSTRLAK 57 (148)
T ss_dssp CCCEEE---EEETTEEEE---------------EEECTTCSSCEEEHHHHH
T ss_pred ceEEEE---EEECCEEEE---------------EEEECCCCccccCHHHHH
Confidence 457766 678999654 789999999999866543
No 39
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=46.12 E-value=11 Score=29.11 Aligned_cols=18 Identities=17% Similarity=0.623 Sum_probs=15.7
Q ss_pred cceEEEeEEEEECCEEee
Q 046564 19 DDYFINLKSIKVDGKVVS 36 (160)
Q Consensus 19 ~~YyV~l~gIsVgg~~l~ 36 (160)
+-|||+|..|++||+.++
T Consensus 156 tPyyvtl~~l~~~g~~i~ 173 (218)
T 4ay0_A 156 SPFYMNIGELTFGGKSIP 173 (218)
T ss_dssp SSSCEEEEEEEETTEECC
T ss_pred CCCEEEEEEEEECCEEcc
Confidence 469999999999999764
No 40
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=43.47 E-value=31 Score=22.74 Aligned_cols=15 Identities=13% Similarity=-0.086 Sum_probs=13.2
Q ss_pred eEEeccccceeechH
Q 046564 52 AKISTFTPYAVLHSA 66 (160)
Q Consensus 52 ~iiDSGt~~T~L~~~ 66 (160)
++||||...+.++..
T Consensus 30 v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 30 VVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCCCceEEeEc
Confidence 889999999998854
No 41
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=31.44 E-value=46 Score=23.69 Aligned_cols=28 Identities=25% Similarity=0.237 Sum_probs=22.4
Q ss_pred EeEEEEECCEEeeecCcccccccCCCCceEEeccccceeechH
Q 046564 24 NLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHSA 66 (160)
Q Consensus 24 ~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~~ 66 (160)
.+..|.|+|+.+. .++|||...|.|.+.
T Consensus 23 P~v~i~I~G~~~~---------------~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 23 PRITLKVGGQPVT---------------FLVDTGAQHSVLTQN 50 (132)
T ss_dssp SEEEEEETTEEEE---------------EEECTTCSSCEECSC
T ss_pred CEEEEEECCEEEE---------------EEEeCCCCeEEEccc
Confidence 4566899998764 679999999999864
No 42
>1l4i_A SFAE protein; periplasmic chaperone, immunoglobulin fold; 2.20A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1
Probab=29.61 E-value=31 Score=26.15 Aligned_cols=17 Identities=18% Similarity=0.559 Sum_probs=15.0
Q ss_pred cceEEEeEEEEECCEEe
Q 046564 19 DDYFINLKSIKVDGKVV 35 (160)
Q Consensus 19 ~~YyV~l~gIsVgg~~l 35 (160)
+-|||.|..++++|+.+
T Consensus 146 tpy~vtl~~l~~~g~~~ 162 (206)
T 1l4i_A 146 TPYYLTVTDLKAGNKSL 162 (206)
T ss_dssp SSSCEEEEEEEETTEEC
T ss_pred CCceEEEEEEeeCCcEe
Confidence 56999999999999875
No 43
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=26.85 E-value=25 Score=27.44 Aligned_cols=18 Identities=39% Similarity=0.754 Sum_probs=15.6
Q ss_pred cceEEEeEEEEECCEEee
Q 046564 19 DDYFINLKSIKVDGKVVS 36 (160)
Q Consensus 19 ~~YyV~l~gIsVgg~~l~ 36 (160)
+-|||.|..|+++|+.+.
T Consensus 178 tPyyvtl~~l~~~g~~~~ 195 (239)
T 4djm_A 178 TPFYINLSTLTVGGKEVK 195 (239)
T ss_dssp SSSCBCEEEEEETTEECS
T ss_pred CceEEEEEEEEECCEecc
Confidence 569999999999998764
No 44
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=23.31 E-value=32 Score=26.40 Aligned_cols=18 Identities=33% Similarity=0.757 Sum_probs=15.5
Q ss_pred cceEEEeEEEEECCEEee
Q 046564 19 DDYFINLKSIKVDGKVVS 36 (160)
Q Consensus 19 ~~YyV~l~gIsVgg~~l~ 36 (160)
+-|||.|..|+++|+.+.
T Consensus 161 tpy~vtl~~l~~~g~~~~ 178 (221)
T 2co7_B 161 TPFYMNLASVTVGGKPIT 178 (221)
T ss_dssp SSSCBCEEEEEETTEECC
T ss_pred CCcEEEEEEEeeCCeecc
Confidence 469999999999998764
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=22.84 E-value=89 Score=21.70 Aligned_cols=26 Identities=23% Similarity=0.235 Sum_probs=21.4
Q ss_pred EeEEEEECCEEeeecCcccccccCCCCceEEeccccceeech
Q 046564 24 NLKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHS 65 (160)
Q Consensus 24 ~l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~ 65 (160)
.+. |.|+|+... .++|||.-.|.|.+
T Consensus 15 P~v-ikI~Gq~~e---------------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 15 EIL-IFVNGYPIK---------------FLLDTGADITVLNR 40 (116)
T ss_dssp EEE-EEETTEEEE---------------EEECTTCSSCEEEG
T ss_pred CEE-EEECCEEEE---------------EEecCCCCcEEEcc
Confidence 456 999999754 67999999999985
No 46
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=21.71 E-value=1e+02 Score=20.76 Aligned_cols=26 Identities=23% Similarity=0.356 Sum_probs=21.2
Q ss_pred eEEEEECCEEeeecCcccccccCCCCceEEeccccceeech
Q 046564 25 LKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLHS 65 (160)
Q Consensus 25 l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~~ 65 (160)
+.-|.|+|+... .++|||.--|.|.+
T Consensus 10 ~vtvkI~Gq~~e---------------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 10 LVTIKIGGQLKE---------------ALLDTGADDTIIEE 35 (99)
T ss_dssp EEEEEETTEEEE---------------EEECTTCSSEEESC
T ss_pred EEEEEECCEEEE---------------EEeccCCCcEEEec
Confidence 456899998754 67999999999985
No 47
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=21.64 E-value=15 Score=27.49 Aligned_cols=39 Identities=21% Similarity=0.339 Sum_probs=23.7
Q ss_pred ceEEEeEEEEECCE-EeeecC--ccc---ccc--c--CCCCceEEeccc
Q 046564 20 DYFINLKSIKVDGK-VVSFDT--SLL---SID--S--GAVGGAKISTFT 58 (160)
Q Consensus 20 ~YyV~l~gIsVgg~-~l~i~~--~~~---~~~--~--~G~GG~iiDSGt 58 (160)
.|-.=|.||-|||+ ++++.. ..| .+. + --+|+++|+|.-
T Consensus 6 ~yiaLLRGINVGG~nkv~MadLr~~l~~lGf~~V~TyI~SGNvvF~s~~ 54 (183)
T 2hiy_A 6 RYALLVRGINVGGKNKVVMAELRQELTNLGLEKVESYINSGNIFFTSID 54 (183)
T ss_dssp EEEEECSSCSCC-CCCCCHHHHHHHHHHHTCEEEEEETTTTEEEEEECS
T ss_pred hhhhhccceecCCCCcccHHHHHHHHHHcCCccceEEEecCCEEEecCC
Confidence 57777899999995 687642 111 110 0 126889999874
No 48
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=20.84 E-value=1e+02 Score=20.79 Aligned_cols=25 Identities=12% Similarity=0.206 Sum_probs=20.5
Q ss_pred eEEEEECCEEeeecCcccccccCCCCceEEeccccceeec
Q 046564 25 LKSIKVDGKVVSFDTSLLSIDSGAVGGAKISTFTPYAVLH 64 (160)
Q Consensus 25 l~gIsVgg~~l~i~~~~~~~~~~G~GG~iiDSGt~~T~L~ 64 (160)
+.-|.|+|+.+. .++|||.--|.|.
T Consensus 10 ~vti~I~Gq~~e---------------~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 10 VVTAYIEGQPVE---------------VLLDTGADDSIVA 34 (99)
T ss_dssp EEEEEETTEEEE---------------EEECTTCSSCEES
T ss_pred eEEEEECCEEEE---------------EEEecCCCceEEc
Confidence 566899999764 6799999999994
No 49
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=20.00 E-value=31 Score=26.14 Aligned_cols=17 Identities=12% Similarity=0.554 Sum_probs=14.3
Q ss_pred cceEEEeEEEEECCEEe
Q 046564 19 DDYFINLKSIKVDGKVV 35 (160)
Q Consensus 19 ~~YyV~l~gIsVgg~~l 35 (160)
+-|||+|..|+++|+.+
T Consensus 146 tpy~vtl~~l~~~g~~~ 162 (205)
T 1klf_A 146 TPYYLTVTELNAGTRVL 162 (205)
T ss_dssp SSSCEEEEEEESSSSBC
T ss_pred CCCEEEEEEEEeCCccc
Confidence 46999999999988754
Done!