Query 046569
Match_columns 202
No_of_seqs 176 out of 3241
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 23:47:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046569.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046569hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1p5q_A FKBP52, FK506-binding p 100.0 3.9E-30 1.3E-34 206.3 26.0 200 2-201 77-295 (336)
2 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 6.1E-30 2.1E-34 213.0 25.3 202 1-202 197-417 (457)
3 2if4_A ATFKBP42; FKBP-like, al 100.0 5.5E-31 1.9E-35 211.4 17.9 200 1-200 104-328 (338)
4 3rkv_A Putative peptidylprolyl 99.9 6.6E-25 2.3E-29 157.6 13.3 138 63-200 4-162 (162)
5 4gco_A Protein STI-1; structur 99.9 4.3E-23 1.5E-27 142.8 16.3 114 67-180 10-125 (126)
6 2fbn_A 70 kDa peptidylprolyl i 99.9 2.5E-22 8.6E-27 148.6 17.3 155 47-201 15-187 (198)
7 2hr2_A Hypothetical protein; a 99.9 3.9E-22 1.3E-26 142.2 11.6 127 63-189 4-155 (159)
8 1ihg_A Cyclophilin 40; ppiase 99.8 6E-20 2E-24 149.0 18.1 138 62-199 215-370 (370)
9 3upv_A Heat shock protein STI1 99.8 9.2E-20 3.2E-24 125.1 14.6 115 69-183 3-125 (126)
10 4gcn_A Protein STI-1; structur 99.8 7E-20 2.4E-24 126.6 13.2 113 66-179 4-125 (127)
11 3gyz_A Chaperone protein IPGC; 99.8 5.5E-19 1.9E-23 126.0 15.8 104 67-170 33-138 (151)
12 2xcb_A PCRH, regulatory protei 99.8 1.3E-18 4.5E-23 122.1 15.4 123 67-189 15-139 (142)
13 3sz7_A HSC70 cochaperone (SGT) 99.8 1.1E-18 3.8E-23 125.2 15.3 121 68-188 9-133 (164)
14 2vgx_A Chaperone SYCD; alterna 99.8 1.3E-18 4.6E-23 123.3 14.6 121 67-187 18-140 (148)
15 1kt0_A FKBP51, 51 kDa FK506-bi 99.8 1.1E-19 3.8E-24 151.2 10.0 196 1-197 85-377 (457)
16 4ga2_A E3 SUMO-protein ligase 99.8 1.4E-18 4.9E-23 123.4 13.0 114 68-181 29-145 (150)
17 3q49_B STIP1 homology and U bo 99.8 6.8E-18 2.3E-22 116.8 13.4 120 69-188 8-134 (137)
18 3urz_A Uncharacterized protein 99.8 6.3E-17 2.2E-21 120.7 18.5 114 70-183 4-135 (208)
19 4ga2_A E3 SUMO-protein ligase 99.8 2.4E-18 8.1E-23 122.2 9.3 112 76-187 3-116 (150)
20 1elw_A TPR1-domain of HOP; HOP 99.7 1.5E-16 5.3E-21 106.2 15.7 113 69-181 3-117 (118)
21 4gyw_A UDP-N-acetylglucosamine 99.7 5.8E-17 2E-21 141.5 16.2 122 68-189 7-130 (723)
22 1a17_A Serine/threonine protei 99.7 9E-16 3.1E-20 108.9 19.2 121 63-183 6-128 (166)
23 2vyi_A SGTA protein; chaperone 99.7 4.3E-16 1.5E-20 105.8 16.1 121 64-184 6-128 (131)
24 1hxi_A PEX5, peroxisome target 99.7 5.5E-17 1.9E-21 111.1 10.8 100 72-171 19-120 (121)
25 2xev_A YBGF; tetratricopeptide 99.7 1.9E-16 6.4E-21 108.3 13.4 113 72-184 4-124 (129)
26 2pl2_A Hypothetical conserved 99.7 1E-16 3.6E-21 120.3 12.9 116 71-187 40-168 (217)
27 2dba_A Smooth muscle cell asso 99.7 5.2E-16 1.8E-20 108.1 14.9 111 70-180 28-143 (148)
28 1elr_A TPR2A-domain of HOP; HO 99.7 5.4E-16 1.8E-20 105.5 14.3 117 69-186 3-128 (131)
29 2lni_A Stress-induced-phosphop 99.7 4E-16 1.4E-20 106.6 13.6 114 69-182 15-130 (133)
30 4gyw_A UDP-N-acetylglucosamine 99.7 3.1E-16 1E-20 136.9 14.9 119 69-187 42-162 (723)
31 4i17_A Hypothetical protein; T 99.7 1E-15 3.4E-20 115.0 15.9 118 70-187 7-134 (228)
32 2pl2_A Hypothetical conserved 99.7 2E-15 6.7E-20 113.3 16.2 112 72-183 7-131 (217)
33 3vtx_A MAMA; tetratricopeptide 99.7 2.8E-15 9.4E-20 108.8 15.9 127 70-197 5-167 (184)
34 1na0_A Designed protein CTPR3; 99.7 1E-14 3.5E-19 98.1 16.6 113 70-182 9-123 (125)
35 2h6f_A Protein farnesyltransfe 99.7 8.5E-16 2.9E-20 125.0 13.1 119 68-186 95-216 (382)
36 1zu2_A Mitochondrial import re 99.7 4.1E-16 1.4E-20 110.9 9.3 103 82-184 14-139 (158)
37 2h6f_A Protein farnesyltransfe 99.7 1.9E-15 6.5E-20 123.0 13.8 114 69-182 130-246 (382)
38 3urz_A Uncharacterized protein 99.6 6.1E-15 2.1E-19 109.9 14.9 106 76-182 60-202 (208)
39 3k9i_A BH0479 protein; putativ 99.6 1.2E-15 4E-20 103.4 9.7 98 82-179 2-104 (117)
40 1hh8_A P67PHOX, NCF-2, neutrop 99.6 7E-15 2.4E-19 108.9 14.6 128 68-197 4-147 (213)
41 2c2l_A CHIP, carboxy terminus 99.6 5E-15 1.7E-19 115.5 14.1 100 70-169 4-105 (281)
42 3vtx_A MAMA; tetratricopeptide 99.6 2.1E-14 7.3E-19 104.1 16.4 101 71-171 74-176 (184)
43 4gco_A Protein STI-1; structur 99.6 6.6E-15 2.3E-19 101.4 13.0 98 99-197 10-107 (126)
44 4i17_A Hypothetical protein; T 99.6 1.3E-14 4.4E-19 108.9 15.2 116 71-186 43-169 (228)
45 3gyz_A Chaperone protein IPGC; 99.6 1.1E-15 3.7E-20 108.8 8.7 104 93-197 25-130 (151)
46 2e2e_A Formate-dependent nitri 99.6 2.2E-14 7.6E-19 103.5 14.7 115 69-183 43-162 (177)
47 1wao_1 Serine/threonine protei 99.6 2.5E-15 8.7E-20 125.5 10.1 116 68-183 4-121 (477)
48 2kck_A TPR repeat; tetratricop 99.6 1.5E-14 5.1E-19 95.6 10.9 100 71-170 7-111 (112)
49 3ieg_A DNAJ homolog subfamily 99.6 1.2E-13 4.1E-18 108.9 17.6 115 73-187 237-357 (359)
50 3uq3_A Heat shock protein STI1 99.6 4.4E-14 1.5E-18 106.7 14.3 110 69-178 138-255 (258)
51 2fo7_A Synthetic consensus TPR 99.6 1.3E-13 4.3E-18 93.6 15.3 125 72-197 3-129 (136)
52 1xnf_A Lipoprotein NLPI; TPR, 99.6 1.8E-13 6.1E-18 104.6 17.7 113 67-179 40-154 (275)
53 3as5_A MAMA; tetratricopeptide 99.6 2.9E-13 9.9E-18 97.0 16.7 127 70-197 42-170 (186)
54 2vsy_A XCC0866; transferase, g 99.6 6.3E-14 2.1E-18 119.0 15.3 129 68-197 21-154 (568)
55 3qky_A Outer membrane assembly 99.6 5.4E-14 1.9E-18 107.7 13.1 107 70-176 15-137 (261)
56 3uq3_A Heat shock protein STI1 99.6 5.4E-13 1.8E-17 100.7 18.0 119 70-188 79-225 (258)
57 2yhc_A BAMD, UPF0169 lipoprote 99.6 2.8E-13 9.4E-18 101.9 16.2 109 70-178 4-138 (225)
58 2vgx_A Chaperone SYCD; alterna 99.6 3.7E-14 1.3E-18 100.2 10.5 99 91-189 8-108 (148)
59 4abn_A Tetratricopeptide repea 99.5 8.8E-14 3E-18 116.0 14.2 119 71-189 171-311 (474)
60 1hh8_A P67PHOX, NCF-2, neutrop 99.5 1.3E-13 4.3E-18 102.0 13.5 101 70-170 37-155 (213)
61 3qky_A Outer membrane assembly 99.5 4.7E-13 1.6E-17 102.4 17.1 114 70-183 52-198 (261)
62 4abn_A Tetratricopeptide repea 99.5 1.6E-13 5.4E-18 114.5 15.5 113 70-183 102-226 (474)
63 3as5_A MAMA; tetratricopeptide 99.5 2.6E-13 8.9E-18 97.2 13.5 120 69-188 7-128 (186)
64 2pzi_A Probable serine/threoni 99.5 4.8E-14 1.6E-18 122.5 10.8 125 71-197 434-560 (681)
65 2q7f_A YRRB protein; TPR, prot 99.5 9.3E-13 3.2E-17 98.7 16.4 118 70-187 57-176 (243)
66 2vq2_A PILW, putative fimbrial 99.5 1.2E-12 4E-17 96.8 16.6 116 72-187 44-164 (225)
67 1fch_A Peroxisomal targeting s 99.5 2.2E-13 7.5E-18 108.4 13.3 118 70-187 217-347 (368)
68 3ieg_A DNAJ homolog subfamily 99.5 7.1E-13 2.4E-17 104.5 16.1 110 70-179 3-117 (359)
69 1w3b_A UDP-N-acetylglucosamine 99.5 4E-13 1.4E-17 108.2 14.8 118 70-187 237-356 (388)
70 2r5s_A Uncharacterized protein 99.5 2.7E-13 9.2E-18 98.1 12.3 126 74-200 10-173 (176)
71 4eqf_A PEX5-related protein; a 99.5 2.2E-13 7.5E-18 108.7 12.7 112 76-187 183-298 (365)
72 1w3b_A UDP-N-acetylglucosamine 99.5 4.4E-13 1.5E-17 108.0 14.5 117 69-185 66-184 (388)
73 3upv_A Heat shock protein STI1 99.5 5.1E-13 1.7E-17 91.0 12.8 91 99-189 1-91 (126)
74 3qou_A Protein YBBN; thioredox 99.5 3.4E-13 1.2E-17 105.3 13.2 128 69-197 116-281 (287)
75 2q7f_A YRRB protein; TPR, prot 99.5 6E-13 2.1E-17 99.8 14.1 118 70-187 91-210 (243)
76 3u4t_A TPR repeat-containing p 99.5 2E-13 7E-18 104.3 11.6 106 72-177 39-149 (272)
77 2xcb_A PCRH, regulatory protei 99.5 2.4E-13 8.1E-18 95.0 11.0 98 92-189 6-105 (142)
78 4eqf_A PEX5-related protein; a 99.5 2.7E-13 9.4E-18 108.2 12.6 118 70-187 213-344 (365)
79 2kat_A Uncharacterized protein 99.5 5.5E-13 1.9E-17 89.6 12.2 99 88-186 3-105 (115)
80 2pzi_A Probable serine/threoni 99.5 2.7E-14 9.3E-19 124.1 6.9 111 69-180 466-578 (681)
81 2ho1_A Type 4 fimbrial biogene 99.5 1.6E-12 5.6E-17 98.2 15.9 112 72-183 73-188 (252)
82 3u4t_A TPR repeat-containing p 99.5 8.6E-13 2.9E-17 100.8 14.4 115 70-184 74-190 (272)
83 2e2e_A Formate-dependent nitri 99.5 5.4E-14 1.8E-18 101.5 7.1 121 76-197 16-141 (177)
84 2vq2_A PILW, putative fimbrial 99.5 2.4E-12 8.3E-17 95.1 16.2 113 71-183 77-195 (225)
85 2gw1_A Mitochondrial precursor 99.5 1E-12 3.5E-17 108.8 15.6 104 66-170 2-107 (514)
86 2y4t_A DNAJ homolog subfamily 99.5 2.3E-12 8E-17 105.2 17.4 113 67-179 23-140 (450)
87 2l6j_A TPR repeat-containing p 99.5 1.6E-14 5.4E-19 95.9 3.6 90 70-159 4-101 (111)
88 2ho1_A Type 4 fimbrial biogene 99.5 1.1E-12 3.7E-17 99.2 14.1 119 69-187 36-158 (252)
89 2y4t_A DNAJ homolog subfamily 99.5 3.2E-12 1.1E-16 104.4 17.9 113 73-185 260-378 (450)
90 4gcn_A Protein STI-1; structur 99.5 2.7E-13 9.1E-18 93.3 9.5 72 99-170 5-76 (127)
91 3cv0_A Peroxisome targeting si 99.5 1.3E-12 4.6E-17 101.8 14.6 120 70-189 172-305 (327)
92 3hym_B Cell division cycle pro 99.5 1.8E-12 6.3E-17 101.2 15.2 120 70-189 90-212 (330)
93 1xnf_A Lipoprotein NLPI; TPR, 99.5 1.4E-12 4.8E-17 99.5 13.8 116 81-197 16-137 (275)
94 2fo7_A Synthetic consensus TPR 99.5 2.7E-12 9.2E-17 86.9 13.6 100 70-169 35-136 (136)
95 3hym_B Cell division cycle pro 99.5 2.4E-12 8.1E-17 100.5 15.1 115 73-187 162-287 (330)
96 3fp2_A TPR repeat-containing p 99.5 5.5E-13 1.9E-17 111.2 11.8 113 59-172 14-128 (537)
97 1na3_A Designed protein CTPR2; 99.5 2.7E-12 9.2E-17 81.9 12.5 84 99-182 6-89 (91)
98 1hxi_A PEX5, peroxisome target 99.4 4.4E-12 1.5E-16 86.4 13.8 94 103-197 18-111 (121)
99 3mkr_A Coatomer subunit epsilo 99.4 3.6E-12 1.2E-16 99.8 14.8 112 72-183 132-247 (291)
100 3edt_B KLC 2, kinesin light ch 99.4 3.2E-12 1.1E-16 97.4 14.2 130 67-197 40-195 (283)
101 2yhc_A BAMD, UPF0169 lipoprote 99.4 5.5E-12 1.9E-16 94.7 15.1 127 70-197 41-210 (225)
102 1qqe_A Vesicular transport pro 99.4 4.9E-12 1.7E-16 98.8 15.3 104 68-171 75-193 (292)
103 3sz7_A HSC70 cochaperone (SGT) 99.4 2.9E-12 1E-16 91.4 12.7 98 99-197 8-105 (164)
104 1fch_A Peroxisomal targeting s 99.4 3.9E-12 1.3E-16 101.1 14.7 120 76-197 188-311 (368)
105 2l6j_A TPR repeat-containing p 99.4 3.5E-12 1.2E-16 84.4 12.2 83 101-183 3-91 (111)
106 3mkr_A Coatomer subunit epsilo 99.4 2.5E-12 8.7E-17 100.6 13.0 95 82-176 178-275 (291)
107 4g1t_A Interferon-induced prot 99.4 4.4E-12 1.5E-16 104.4 14.9 114 70-183 51-185 (472)
108 1qqe_A Vesicular transport pro 99.4 3.4E-12 1.2E-16 99.7 13.1 105 69-173 116-236 (292)
109 3fp2_A TPR repeat-containing p 99.4 4.5E-12 1.5E-16 105.7 13.7 111 77-187 283-395 (537)
110 3ma5_A Tetratricopeptide repea 99.4 3.1E-12 1.1E-16 84.1 10.1 82 99-180 4-87 (100)
111 2gw1_A Mitochondrial precursor 99.4 7.8E-12 2.7E-16 103.5 13.9 113 71-183 373-496 (514)
112 3cv0_A Peroxisome targeting si 99.4 7.8E-12 2.7E-16 97.5 12.7 107 70-176 21-129 (327)
113 2vsy_A XCC0866; transferase, g 99.4 4.3E-12 1.5E-16 107.7 11.9 114 83-197 2-117 (568)
114 3q49_B STIP1 homology and U bo 99.4 1.1E-11 3.8E-16 85.1 11.9 91 99-189 6-96 (137)
115 3n71_A Histone lysine methyltr 99.4 1.8E-11 6E-16 102.5 15.2 130 67-197 306-461 (490)
116 2hr2_A Hypothetical protein; a 99.4 8.7E-12 3E-16 88.7 11.2 95 101-196 10-127 (159)
117 2kc7_A BFR218_protein; tetratr 99.4 1.3E-12 4.4E-17 85.2 6.5 67 107-173 5-72 (99)
118 2xpi_A Anaphase-promoting comp 99.4 2.2E-11 7.5E-16 103.0 15.6 106 73-178 478-592 (597)
119 2xpi_A Anaphase-promoting comp 99.4 2.7E-11 9.3E-16 102.4 16.0 127 70-197 373-501 (597)
120 3ulq_A Response regulator aspa 99.3 2.6E-11 8.9E-16 97.7 14.8 121 67-187 140-281 (383)
121 1na3_A Designed protein CTPR2; 99.3 2.1E-11 7.2E-16 77.7 11.0 82 69-150 8-91 (91)
122 3edt_B KLC 2, kinesin light ch 99.3 1.9E-11 6.4E-16 93.1 12.7 99 67-165 82-198 (283)
123 3ro3_A PINS homolog, G-protein 99.3 5.3E-11 1.8E-15 83.0 13.9 121 67-187 6-146 (164)
124 1ouv_A Conserved hypothetical 99.3 1.2E-10 4E-15 89.4 15.8 107 71-181 7-121 (273)
125 2ifu_A Gamma-SNAP; membrane fu 99.3 2.3E-11 8E-16 95.6 12.0 100 69-170 115-228 (307)
126 3u3w_A Transcriptional activat 99.3 3.2E-11 1.1E-15 94.0 12.4 96 70-165 155-266 (293)
127 3nf1_A KLC 1, kinesin light ch 99.3 5.7E-11 1.9E-15 91.9 13.5 130 67-197 66-221 (311)
128 1p5q_A FKBP52, FK506-binding p 99.3 3.7E-11 1.3E-15 95.9 12.7 98 68-165 194-294 (336)
129 2kck_A TPR repeat; tetratricop 99.3 9.7E-12 3.3E-16 81.8 7.8 98 99-197 3-103 (112)
130 3u3w_A Transcriptional activat 99.3 3.2E-11 1.1E-15 93.9 12.0 128 70-197 115-263 (293)
131 2lni_A Stress-induced-phosphop 99.3 5.6E-11 1.9E-15 80.6 11.7 98 99-197 13-110 (133)
132 2qfc_A PLCR protein; TPR, HTH, 99.3 1.4E-10 4.9E-15 90.3 15.2 120 70-189 115-255 (293)
133 2kc7_A BFR218_protein; tetratr 99.3 2.5E-11 8.5E-16 79.0 9.2 89 74-170 4-95 (99)
134 3rkv_A Putative peptidylprolyl 99.3 3E-11 1E-15 85.8 10.1 96 100-196 9-122 (162)
135 3q15_A PSP28, response regulat 99.3 6.8E-11 2.3E-15 95.2 13.1 120 68-187 139-278 (378)
136 1a17_A Serine/threonine protei 99.3 6.2E-11 2.1E-15 83.6 11.4 96 70-165 47-146 (166)
137 3q15_A PSP28, response regulat 99.3 1.3E-10 4.4E-15 93.6 14.7 101 68-168 180-293 (378)
138 3nf1_A KLC 1, kinesin light ch 99.3 9.8E-11 3.4E-15 90.5 13.2 99 67-165 108-224 (311)
139 3ulq_A Response regulator aspa 99.3 1.1E-10 3.7E-15 94.0 13.9 101 67-167 181-295 (383)
140 1elw_A TPR1-domain of HOP; HOP 99.3 1.5E-10 5.3E-15 76.5 12.2 96 101-197 3-98 (118)
141 4a1s_A PINS, partner of inscut 99.2 1.4E-10 4.9E-15 93.5 14.2 119 67-185 45-181 (411)
142 2ond_A Cleavage stimulation fa 99.2 1.6E-10 5.5E-15 90.7 13.9 115 70-184 99-217 (308)
143 2ifu_A Gamma-SNAP; membrane fu 99.2 6.8E-11 2.3E-15 92.9 11.7 101 68-169 74-188 (307)
144 2fbn_A 70 kDa peptidylprolyl i 99.2 3.5E-11 1.2E-15 88.3 9.4 116 81-197 15-148 (198)
145 2vyi_A SGTA protein; chaperone 99.2 2.5E-10 8.4E-15 76.8 13.0 91 99-189 9-99 (131)
146 2xev_A YBGF; tetratricopeptide 99.2 1.1E-10 3.7E-15 79.2 10.9 94 103-197 3-102 (129)
147 3gw4_A Uncharacterized protein 99.2 1.7E-10 5.8E-15 84.1 11.6 119 69-187 25-164 (203)
148 4g1t_A Interferon-induced prot 99.2 1.1E-10 3.6E-15 96.1 11.7 111 70-180 94-219 (472)
149 2ond_A Cleavage stimulation fa 99.2 1.7E-10 5.8E-15 90.5 12.3 111 69-179 49-177 (308)
150 2c2l_A CHIP, carboxy terminus 99.2 1.4E-10 5E-15 90.1 11.3 91 100-190 2-92 (281)
151 3sf4_A G-protein-signaling mod 99.2 3.9E-10 1.4E-14 90.3 14.2 120 68-187 185-324 (406)
152 1pc2_A Mitochondria fission pr 99.2 1.8E-10 6.1E-15 81.1 10.6 100 86-185 14-120 (152)
153 3rjv_A Putative SEL1 repeat pr 99.2 1.9E-10 6.6E-15 85.6 11.4 109 71-181 51-173 (212)
154 3rjv_A Putative SEL1 repeat pr 99.2 2E-10 6.8E-15 85.5 11.5 111 69-182 17-137 (212)
155 2dba_A Smooth muscle cell asso 99.2 2.6E-10 8.8E-15 78.8 11.3 98 99-197 25-125 (148)
156 3qww_A SET and MYND domain-con 99.2 4.2E-10 1.4E-14 92.8 14.3 111 70-180 298-431 (433)
157 1ouv_A Conserved hypothetical 99.2 1.1E-09 3.8E-14 83.9 15.9 107 71-181 39-157 (273)
158 3ro2_A PINS homolog, G-protein 99.2 4.5E-10 1.5E-14 87.2 13.6 116 70-185 5-138 (338)
159 3ro3_A PINS homolog, G-protein 99.2 4.3E-10 1.5E-14 78.3 12.1 100 69-168 48-161 (164)
160 1dce_A Protein (RAB geranylger 99.2 1.2E-09 4.3E-14 92.9 17.2 134 64-197 22-170 (567)
161 4f3v_A ESX-1 secretion system 99.2 3.6E-10 1.2E-14 87.8 12.6 106 72-178 137-249 (282)
162 2if4_A ATFKBP42; FKBP-like, al 99.2 3E-11 1E-15 96.5 6.7 101 72-172 232-335 (338)
163 1elr_A TPR2A-domain of HOP; HO 99.2 2.3E-10 7.7E-15 77.1 10.0 97 100-197 2-105 (131)
164 1na0_A Designed protein CTPR3; 99.2 8.6E-10 2.9E-14 73.5 12.8 96 101-197 8-103 (125)
165 1dce_A Protein (RAB geranylger 99.2 1.1E-09 3.7E-14 93.4 16.0 116 68-183 61-191 (567)
166 2qfc_A PLCR protein; TPR, HTH, 99.2 4.5E-09 1.5E-13 81.7 18.3 121 67-187 72-213 (293)
167 1wao_1 Serine/threonine protei 99.2 3E-11 1E-15 100.8 6.0 100 70-169 40-154 (477)
168 3ro2_A PINS homolog, G-protein 99.1 8.5E-10 2.9E-14 85.6 13.5 129 68-197 181-329 (338)
169 3sf4_A G-protein-signaling mod 99.1 3.9E-10 1.3E-14 90.3 11.8 119 69-187 126-284 (406)
170 4a1s_A PINS, partner of inscut 99.1 4.4E-10 1.5E-14 90.7 11.6 118 68-185 164-318 (411)
171 3qwp_A SET and MYND domain-con 99.1 2.2E-09 7.5E-14 88.4 15.9 113 70-182 287-422 (429)
172 2v5f_A Prolyl 4-hydroxylase su 99.1 1.4E-09 4.9E-14 71.9 12.0 84 102-185 5-95 (104)
173 2r5s_A Uncharacterized protein 99.1 2.3E-10 7.8E-15 82.5 8.8 76 89-164 93-172 (176)
174 3bee_A Putative YFRE protein; 99.1 8.7E-10 3E-14 71.6 9.6 75 99-173 3-80 (93)
175 3k9i_A BH0479 protein; putativ 99.1 6.7E-10 2.3E-14 74.6 9.4 77 67-143 24-102 (117)
176 2v5f_A Prolyl 4-hydroxylase su 99.1 1.8E-09 6.1E-14 71.4 11.1 74 70-143 5-87 (104)
177 3dra_A Protein farnesyltransfe 99.1 4.1E-09 1.4E-13 83.0 13.9 114 71-184 104-234 (306)
178 3dra_A Protein farnesyltransfe 99.1 4.3E-09 1.5E-13 82.9 13.9 114 70-183 67-193 (306)
179 3gw4_A Uncharacterized protein 99.0 5.4E-09 1.8E-13 76.0 12.2 101 67-167 63-178 (203)
180 3dss_A Geranylgeranyl transfer 99.0 3.1E-08 1.1E-12 78.7 17.4 114 70-183 64-192 (331)
181 1ihg_A Cyclophilin 40; ppiase 99.0 2.2E-09 7.4E-14 86.8 10.9 91 68-158 271-363 (370)
182 3q7a_A Farnesyltransferase alp 99.0 1.9E-08 6.4E-13 80.4 15.5 109 79-187 63-176 (349)
183 2xm6_A Protein corresponding t 99.0 7E-09 2.4E-13 86.3 13.4 109 71-181 329-451 (490)
184 3dss_A Geranylgeranyl transfer 99.0 1.6E-08 5.3E-13 80.4 14.7 119 78-196 37-170 (331)
185 3qou_A Protein YBBN; thioredox 99.0 1.8E-09 6E-14 84.1 9.0 94 71-164 152-283 (287)
186 1klx_A Cysteine rich protein B 99.0 1.1E-08 3.6E-13 71.1 11.4 97 76-176 31-135 (138)
187 3ma5_A Tetratricopeptide repea 98.9 3.7E-09 1.3E-13 69.1 7.8 78 69-146 6-87 (100)
188 1zu2_A Mitochondrial import re 98.9 5.3E-09 1.8E-13 74.2 8.9 72 113-184 13-94 (158)
189 2ooe_A Cleavage stimulation fa 98.9 2E-08 6.8E-13 84.4 13.6 127 70-197 321-451 (530)
190 3q7a_A Farnesyltransferase alp 98.9 2.1E-08 7.3E-13 80.1 12.8 116 68-183 86-214 (349)
191 1hz4_A MALT regulatory protein 98.9 4.9E-08 1.7E-12 77.9 14.8 99 70-168 53-167 (373)
192 4f3v_A ESX-1 secretion system 98.9 1.8E-08 6.3E-13 78.2 11.2 123 74-198 106-235 (282)
193 2f4e_A ATFKBP42; FKBP-like, al 98.9 3.5E-09 1.2E-13 77.1 6.5 70 1-70 104-179 (180)
194 2ooe_A Cleavage stimulation fa 98.8 3.7E-08 1.3E-12 82.7 12.7 109 70-178 272-398 (530)
195 3n71_A Histone lysine methyltr 98.8 2.5E-08 8.6E-13 83.4 10.8 99 68-166 349-465 (490)
196 2kat_A Uncharacterized protein 98.8 6.4E-08 2.2E-12 64.3 10.2 68 120-187 3-70 (115)
197 1nzn_A CGI-135 protein, fissio 98.8 9.5E-08 3.2E-12 64.9 10.8 102 84-185 15-123 (126)
198 2xm6_A Protein corresponding t 98.8 3.3E-07 1.1E-11 76.2 15.8 104 72-179 77-192 (490)
199 1hz4_A MALT regulatory protein 98.7 1.8E-07 6.1E-12 74.6 13.2 120 65-184 9-149 (373)
200 1jvw_A Macrophage infectivity 98.7 7.9E-08 2.7E-12 68.9 8.4 64 1-66 89-153 (167)
201 3o5e_A Peptidyl-prolyl CIS-tra 98.7 3.9E-08 1.3E-12 68.9 6.2 53 1-53 89-142 (144)
202 3e4b_A ALGK; tetratricopeptide 98.6 4.4E-07 1.5E-11 75.0 12.7 105 72-181 178-294 (452)
203 3b7x_A FK506-binding protein 6 98.6 6.8E-08 2.3E-12 66.9 6.3 53 1-53 80-133 (134)
204 3kz7_A FK506-binding protein 3 98.6 7.2E-08 2.5E-12 65.3 6.3 52 1-52 65-118 (119)
205 3o5q_A Peptidyl-prolyl CIS-tra 98.6 6.6E-08 2.3E-12 66.4 6.1 53 1-53 73-126 (128)
206 2vn1_A 70 kDa peptidylprolyl i 98.6 7.9E-08 2.7E-12 66.1 6.5 54 1-54 73-127 (129)
207 2ppn_A FK506-binding protein 1 98.6 8.4E-08 2.9E-12 63.7 6.3 52 1-52 54-106 (107)
208 3e4b_A ALGK; tetratricopeptide 98.6 5.7E-07 1.9E-11 74.3 12.6 91 71-165 249-351 (452)
209 4b4t_Q 26S proteasome regulato 98.6 4E-07 1.4E-11 73.8 11.4 100 68-167 53-206 (434)
210 1klx_A Cysteine rich protein B 98.6 4.6E-07 1.6E-11 62.7 9.8 93 84-182 9-105 (138)
211 1yat_A FK506 binding protein; 98.6 1.1E-07 3.8E-12 63.8 6.3 52 1-52 60-112 (113)
212 3ly7_A Transcriptional activat 98.6 1.1E-06 3.9E-11 70.4 13.1 101 70-171 196-345 (372)
213 2awg_A 38 kDa FK-506 binding p 98.6 1.2E-07 4.2E-12 64.1 6.3 53 1-53 64-117 (118)
214 2lgo_A FKBP; infectious diseas 98.6 1.2E-07 4E-12 65.3 6.2 52 1-52 78-130 (130)
215 2jwx_A FKBP38NTD, FK506-bindin 98.5 1.2E-07 4.2E-12 67.2 6.0 54 1-54 94-149 (157)
216 2y78_A Peptidyl-prolyl CIS-tra 98.5 1.3E-07 4.4E-12 65.4 5.9 52 1-52 81-133 (133)
217 2pbc_A FK506-binding protein 2 98.5 1E-07 3.6E-12 62.7 4.8 54 1-54 44-98 (102)
218 4dip_A Peptidyl-prolyl CIS-tra 98.5 1.7E-07 5.7E-12 64.1 5.9 53 1-54 70-123 (125)
219 1r9h_A FKB-6, FK506 binding pr 98.5 2.3E-07 8E-12 64.2 6.3 55 1-55 68-123 (135)
220 3u64_A Protein TP_0956; tetrat 98.5 1.8E-06 6.2E-11 66.8 11.5 84 86-169 179-273 (301)
221 3o48_A Mitochondria fission 1 98.4 4.3E-06 1.5E-10 57.0 11.3 86 100-185 38-127 (134)
222 2d9f_A FK506-binding protein 8 98.4 1.4E-07 4.8E-12 65.3 3.9 59 1-59 68-128 (135)
223 3mv2_B Coatomer subunit epsilo 98.4 2.8E-06 9.4E-11 66.8 11.4 99 75-178 181-295 (310)
224 1y8m_A FIS1; mitochondria, unk 98.4 7.9E-06 2.7E-10 56.4 12.1 86 100-185 37-126 (144)
225 1xi4_A Clathrin heavy chain; a 98.4 4E-06 1.4E-10 77.2 13.1 106 71-182 1196-1326(1630)
226 3mv2_B Coatomer subunit epsilo 98.4 6E-06 2E-10 64.9 12.4 116 73-189 103-230 (310)
227 1pc2_A Mitochondria fission pr 98.4 6.1E-06 2.1E-10 57.9 11.0 75 70-144 32-113 (152)
228 4b4t_Q 26S proteasome regulato 98.4 4.5E-06 1.5E-10 67.6 11.9 97 70-166 135-246 (434)
229 1xi4_A Clathrin heavy chain; a 98.4 3.8E-06 1.3E-10 77.3 12.1 89 75-168 1054-1166(1630)
230 3bee_A Putative YFRE protein; 98.4 5E-06 1.7E-10 53.6 9.5 68 70-137 6-78 (93)
231 1b89_A Protein (clathrin heavy 98.3 1.7E-06 5.9E-11 71.0 8.9 105 72-183 124-254 (449)
232 1q1c_A FK506-binding protein 4 98.3 8.4E-07 2.9E-11 68.9 6.5 59 2-60 220-280 (280)
233 3qww_A SET and MYND domain-con 98.3 4.2E-06 1.4E-10 68.9 10.9 72 68-139 338-424 (433)
234 2lkn_A AH receptor-interacting 98.2 1.4E-06 4.8E-11 62.1 5.1 57 1-57 67-161 (165)
235 3jxv_A 70 kDa peptidyl-prolyl 98.2 1.9E-06 6.5E-11 69.2 6.3 54 1-54 177-236 (356)
236 3qwp_A SET and MYND domain-con 98.2 4.9E-06 1.7E-10 68.4 8.9 79 68-146 327-423 (429)
237 1u79_A FKBP-type peptidyl-prol 98.2 1.8E-06 6.1E-11 59.2 5.3 52 1-52 65-128 (129)
238 3u64_A Protein TP_0956; tetrat 98.2 4.2E-05 1.4E-09 59.3 12.7 84 99-182 149-251 (301)
239 3ffl_A Anaphase-promoting comp 98.2 6.9E-05 2.4E-09 53.1 12.6 109 71-180 21-165 (167)
240 1q1c_A FK506-binding protein 4 98.1 3.9E-06 1.4E-10 65.1 6.2 54 1-54 105-159 (280)
241 1b89_A Protein (clathrin heavy 98.0 6.4E-06 2.2E-10 67.7 5.1 69 102-183 122-190 (449)
242 3ffl_A Anaphase-promoting comp 97.8 0.00026 9E-09 50.1 9.4 78 69-147 62-166 (167)
243 3jxv_A 70 kDa peptidyl-prolyl 97.7 4.6E-06 1.6E-10 67.0 0.1 54 1-54 65-119 (356)
244 1nzn_A CGI-135 protein, fissio 97.7 0.00054 1.9E-08 46.3 10.3 73 72-144 37-116 (126)
245 2ff4_A Probable regulatory pro 97.6 0.0027 9.2E-08 51.4 14.7 96 69-164 114-233 (388)
246 4e6h_A MRNA 3'-END-processing 97.4 0.0058 2E-07 53.1 15.5 123 75-198 383-531 (679)
247 4h7y_A Dual specificity protei 97.4 0.0048 1.6E-07 43.0 11.9 85 87-172 36-130 (161)
248 3ly7_A Transcriptional activat 97.4 0.00047 1.6E-08 55.3 7.9 66 72-137 279-345 (372)
249 4e6h_A MRNA 3'-END-processing 97.4 0.0017 6E-08 56.3 12.1 79 87-165 326-407 (679)
250 3o48_A Mitochondria fission 1 97.4 0.0048 1.7E-07 41.9 11.6 72 74-145 44-121 (134)
251 4gns_B Protein CSD3, chitin bi 97.3 0.0018 6E-08 56.7 11.0 62 102-163 337-398 (754)
252 1y8m_A FIS1; mitochondria, unk 97.3 0.006 2.1E-07 42.0 11.1 71 73-143 42-118 (144)
253 1hxv_A Trigger factor; FKBP fo 97.2 0.00043 1.5E-08 46.1 4.3 47 1-52 65-112 (113)
254 3kae_A CDC27, possible protein 96.9 0.019 6.5E-07 40.9 11.0 99 75-176 38-154 (242)
255 3txn_A 26S proteasome regulato 96.8 0.023 7.8E-07 46.0 12.2 91 75-165 104-210 (394)
256 1ya0_A SMG-7 transcript varian 96.8 0.015 5.2E-07 48.5 11.4 82 102-183 152-233 (497)
257 4b4t_R RPN7, 26S proteasome re 96.3 0.076 2.6E-06 43.4 12.3 96 73-168 134-240 (429)
258 4g26_A Pentatricopeptide repea 96.2 0.1 3.6E-06 43.5 12.9 99 73-171 108-212 (501)
259 3pr9_A FKBP-type peptidyl-prol 95.9 0.007 2.4E-07 42.6 3.7 32 1-32 52-84 (157)
260 2uy1_A Cleavage stimulation fa 95.9 0.14 4.8E-06 42.5 12.3 56 87-143 196-253 (493)
261 2uy1_A Cleavage stimulation fa 95.8 0.15 5.3E-06 42.3 12.0 106 72-182 288-396 (493)
262 4g26_A Pentatricopeptide repea 95.7 0.31 1E-05 40.6 13.5 87 84-170 84-176 (501)
263 4gns_B Protein CSD3, chitin bi 95.6 0.04 1.4E-06 48.3 8.1 57 72-128 339-397 (754)
264 1zbp_A Hypothetical protein VP 95.5 0.13 4.4E-06 39.3 9.7 65 111-175 6-70 (273)
265 4dt4_A FKBP-type 16 kDa peptid 95.5 0.012 4E-07 41.9 3.8 32 1-32 63-95 (169)
266 4b4t_P 26S proteasome regulato 95.4 0.55 1.9E-05 38.5 13.9 96 70-165 137-247 (445)
267 1ix5_A FKBP; ppiase, isomerase 95.2 0.014 5E-07 40.7 3.3 32 1-32 53-85 (151)
268 1zbp_A Hypothetical protein VP 95.2 0.22 7.4E-06 38.0 9.9 91 78-168 5-132 (273)
269 2kr7_A FKBP-type peptidyl-prol 95.2 0.02 6.7E-07 40.0 3.9 32 1-32 45-77 (151)
270 3cgm_A SLYD, peptidyl-prolyl C 95.1 0.02 6.9E-07 40.2 3.8 32 1-32 35-67 (158)
271 3prb_A FKBP-type peptidyl-prol 95.0 0.022 7.5E-07 42.6 3.9 32 1-32 52-84 (231)
272 2v6y_A AAA family ATPase, P60 94.6 0.31 1.1E-05 30.1 7.9 33 66-98 7-39 (83)
273 2k8i_A SLYD, peptidyl-prolyl C 94.4 0.033 1.1E-06 39.7 3.5 32 1-32 40-72 (171)
274 1ya0_A SMG-7 transcript varian 94.3 0.31 1.1E-05 40.7 9.7 79 70-148 152-232 (497)
275 2kfw_A FKBP-type peptidyl-prol 94.1 0.041 1.4E-06 40.1 3.5 32 1-32 40-72 (196)
276 2w2u_A Hypothetical P60 katani 93.9 0.32 1.1E-05 30.1 6.9 36 63-98 12-47 (83)
277 1w26_A Trigger factor, TF; cha 93.2 0.11 3.7E-06 42.6 4.9 49 1-54 193-242 (432)
278 2v6x_A Vacuolar protein sortin 92.6 0.66 2.3E-05 28.7 6.9 34 65-98 8-41 (85)
279 3lpz_A GET4 (YOR164C homolog); 92.4 3.2 0.00011 32.7 12.1 93 67-159 32-159 (336)
280 4fhn_B Nucleoporin NUP120; pro 92.1 0.54 1.9E-05 43.2 8.5 89 74-162 846-964 (1139)
281 4a5x_A MITD1, MIT domain-conta 91.7 1.4 4.9E-05 27.3 7.6 31 68-98 14-44 (86)
282 3mkq_A Coatomer beta'-subunit; 91.6 1.1 3.7E-05 38.8 9.6 30 99-128 678-707 (814)
283 1wfd_A Hypothetical protein 15 91.5 1.6 5.3E-05 27.5 7.8 33 66-98 11-43 (93)
284 3spa_A Mtrpol, DNA-directed RN 90.7 4.4 0.00015 37.0 12.4 94 72-165 129-230 (1134)
285 3mkq_B Coatomer subunit alpha; 90.3 3.6 0.00012 29.2 9.6 45 113-162 16-60 (177)
286 4b4t_S RPN3, 26S proteasome re 90.2 0.75 2.6E-05 38.5 6.8 72 99-170 228-304 (523)
287 2cpt_A SKD1 protein, vacuolar 90.0 2.3 7.9E-05 28.0 7.9 34 65-98 13-46 (117)
288 3txn_A 26S proteasome regulato 89.5 7.2 0.00024 31.4 15.6 113 69-181 18-187 (394)
289 3mkr_B Coatomer subunit alpha; 89.4 5.9 0.0002 30.9 10.8 102 73-174 105-236 (320)
290 3mv2_A Coatomer subunit alpha; 88.8 7.1 0.00024 30.5 12.4 106 70-175 114-246 (325)
291 4h7y_A Dual specificity protei 88.3 2.1 7E-05 29.8 6.8 57 81-137 71-129 (161)
292 2ff4_A Probable regulatory pro 87.7 3.1 0.0001 33.3 8.7 60 71-130 172-233 (388)
293 4b4t_R RPN7, 26S proteasome re 87.0 1.5 5.2E-05 35.6 6.6 76 101-176 130-210 (429)
294 2wpv_A GET4, UPF0363 protein Y 86.7 9.6 0.00033 29.6 12.3 93 68-160 31-158 (312)
295 3mkq_A Coatomer beta'-subunit; 86.4 8.4 0.00029 33.2 11.4 28 71-98 682-709 (814)
296 3mkq_B Coatomer subunit alpha; 86.3 6.8 0.00023 27.8 8.8 45 81-128 16-60 (177)
297 1qsa_A Protein (soluble lytic 85.2 4.6 0.00016 34.6 8.8 79 86-164 268-347 (618)
298 2crb_A Nuclear receptor bindin 84.7 2.5 8.4E-05 26.5 5.1 31 68-98 13-43 (97)
299 3kae_A CDC27, possible protein 84.3 9.3 0.00032 27.3 13.1 64 69-132 61-144 (242)
300 3spa_A Mtrpol, DNA-directed RN 84.2 17 0.00057 33.4 12.1 79 99-177 124-208 (1134)
301 3ax2_A Mitochondrial import re 84.2 4.1 0.00014 24.4 5.8 36 142-177 23-58 (73)
302 1t11_A Trigger factor, TF; hel 83.1 0.31 1.1E-05 39.4 0.7 49 1-54 196-245 (392)
303 2crb_A Nuclear receptor bindin 82.7 2.2 7.5E-05 26.7 4.3 28 136-163 15-42 (97)
304 3t5v_B Nuclear mRNA export pro 82.7 3.6 0.00012 33.9 6.9 65 105-169 179-254 (455)
305 1wy6_A Hypothetical protein ST 81.9 10 0.00035 26.0 8.3 50 116-165 105-154 (172)
306 4b4t_S RPN3, 26S proteasome re 81.4 4.5 0.00015 33.9 7.0 64 72-135 233-303 (523)
307 2vkj_A TM1634; membrane protei 81.0 7.8 0.00027 24.1 7.5 45 68-112 51-100 (106)
308 2cfu_A SDSA1; SDS-hydrolase, l 79.1 5.2 0.00018 34.5 7.0 59 137-197 450-508 (658)
309 3t5x_A PCI domain-containing p 77.8 9 0.00031 27.7 7.0 52 68-119 12-70 (203)
310 3t5x_A PCI domain-containing p 74.0 6 0.00021 28.6 5.2 55 99-153 11-70 (203)
311 4gq2_M Nucleoporin NUP120; bet 73.9 8 0.00027 34.9 7.0 52 108-163 816-867 (950)
312 3ax2_A Mitochondrial import re 69.5 15 0.00052 21.8 5.6 25 74-98 21-45 (73)
313 4gq2_M Nucleoporin NUP120; bet 68.2 21 0.00071 32.2 8.3 38 137-174 898-936 (950)
314 1om2_A Protein (mitochondrial 66.9 7.4 0.00025 24.5 3.7 34 142-175 26-59 (95)
315 4b4t_P 26S proteasome regulato 65.8 52 0.0018 26.6 15.9 84 100-183 135-227 (445)
316 1wy6_A Hypothetical protein ST 65.2 27 0.00094 23.9 6.4 55 78-132 99-155 (172)
317 4fhn_B Nucleoporin NUP120; pro 65.0 10 0.00034 34.9 5.7 53 107-163 817-869 (1139)
318 3t5v_B Nuclear mRNA export pro 64.5 49 0.0017 27.1 9.2 71 65-135 171-254 (455)
319 1om2_A Protein (mitochondrial 64.2 22 0.00076 22.3 5.5 37 62-98 12-48 (95)
320 2ijq_A Hypothetical protein; s 64.0 34 0.0011 23.8 8.9 60 71-130 33-103 (161)
321 2dl1_A Spartin; SPG20, MIT, st 61.4 31 0.0011 22.5 7.8 36 63-98 15-50 (116)
322 4a1g_A Mitotic checkpoint seri 61.3 37 0.0013 23.3 6.9 63 99-167 68-132 (152)
323 2cfu_A SDSA1; SDS-hydrolase, l 59.2 17 0.00058 31.3 5.8 49 103-151 450-498 (658)
324 2br9_A 14-3-3E, 14-3-3 protein 58.1 38 0.0013 25.1 6.8 15 149-163 186-200 (234)
325 4a5x_A MITD1, MIT domain-conta 57.8 30 0.001 21.2 7.6 27 139-165 19-45 (86)
326 3myv_A SUSD superfamily protei 57.2 26 0.0009 28.4 6.5 31 100-130 188-218 (454)
327 2rpa_A Katanin P60 ATPase-cont 56.3 19 0.00066 21.7 4.1 26 73-98 15-40 (78)
328 2dl1_A Spartin; SPG20, MIT, st 55.8 18 0.0006 23.7 4.1 43 117-167 18-60 (116)
329 4gq4_A Menin; tumor suppressor 55.5 84 0.0029 25.6 8.9 63 121-183 283-356 (489)
330 3esl_A Checkpoint serine/threo 54.8 57 0.002 23.5 12.6 93 91-184 58-164 (202)
331 3kez_A Putative sugar binding 54.7 30 0.001 28.2 6.4 32 99-130 193-224 (461)
332 3re2_A Predicted protein; meni 54.7 18 0.00062 28.9 4.7 40 89-128 276-322 (472)
333 3ubw_A 14-3-3E, 14-3-3 protein 52.7 52 0.0018 24.8 6.8 15 149-163 212-226 (261)
334 3u84_A Menin; MLL, JUND, ledgf 52.0 21 0.00071 29.1 4.7 28 135-162 317-344 (550)
335 3uzd_A 14-3-3 protein gamma; s 51.7 56 0.0019 24.4 6.8 12 116-127 188-199 (248)
336 1o9d_A 14-3-3-like protein C; 51.7 54 0.0019 24.7 6.8 42 88-129 153-205 (260)
337 3mcx_A SUSD superfamily protei 51.5 34 0.0012 27.9 6.3 33 99-131 199-231 (477)
338 3lew_A SUSD-like carbohydrate 51.5 37 0.0013 28.0 6.5 29 102-130 203-231 (495)
339 2v6y_A AAA family ATPase, P60 51.1 38 0.0013 20.4 6.6 12 120-131 10-21 (83)
340 2w2u_A Hypothetical P60 katani 50.6 40 0.0014 20.4 6.9 21 144-164 27-47 (83)
341 2rpa_A Katanin P60 ATPase-cont 49.5 18 0.00062 21.8 3.2 25 106-130 16-40 (78)
342 2cwy_A Hypothetical protein TT 49.2 45 0.0015 20.7 6.9 24 75-98 6-29 (94)
343 2ymb_A MITD1, MIT domain-conta 48.7 3.7 0.00013 31.0 0.0 36 63-98 16-51 (257)
344 2yhe_A SEC-alkyl sulfatase; hy 54.2 3.7 0.00013 35.5 0.0 60 137-198 462-521 (668)
345 2ket_A Cathelicidin-6; antimic 47.5 8.6 0.00029 17.3 1.1 13 189-201 5-17 (27)
346 3eab_A Spastin; spastin, MIT, 46.9 28 0.00095 21.6 3.8 32 67-98 13-47 (89)
347 2ijq_A Hypothetical protein; s 46.8 69 0.0024 22.2 7.9 60 106-165 36-104 (161)
348 1ccd_A Clara cell 17 KD protei 46.4 45 0.0015 19.9 4.7 45 156-200 20-64 (77)
349 4gq4_A Menin; tumor suppressor 45.3 30 0.001 28.1 4.7 43 88-130 282-331 (489)
350 2wb7_A PT26-6P; extra chromoso 44.8 1.1E+02 0.0037 25.5 8.0 34 117-150 454-488 (526)
351 2jpu_A ORF C02003 protein; sol 44.7 38 0.0013 22.6 4.5 30 69-98 6-35 (129)
352 3myv_A SUSD superfamily protei 44.5 67 0.0023 26.0 6.9 46 119-164 165-218 (454)
353 2npm_A 14-3-3 domain containin 43.7 86 0.0029 23.6 6.8 47 115-164 176-226 (260)
354 3iqu_A 14-3-3 protein sigma; s 43.4 94 0.0032 23.0 6.9 24 104-127 177-201 (236)
355 4abx_A DNA repair protein RECN 43.1 35 0.0012 23.8 4.5 66 120-185 74-140 (175)
356 2cpt_A SKD1 protein, vacuolar 42.6 49 0.0017 21.5 4.8 17 155-171 44-60 (117)
357 3pmr_A Amyloid-like protein 1; 41.7 1E+02 0.0034 22.5 9.3 84 102-186 93-183 (219)
358 3re2_A Predicted protein; meni 41.6 1E+02 0.0036 24.7 7.1 62 121-182 276-348 (472)
359 2o8p_A 14-3-3 domain containin 41.5 63 0.0021 23.8 5.6 47 84-130 139-196 (227)
360 3mcx_A SUSD superfamily protei 41.0 84 0.0029 25.6 7.1 48 118-165 176-231 (477)
361 2pmr_A Uncharacterized protein 41.0 62 0.0021 19.9 5.1 30 64-93 33-62 (87)
362 3lew_A SUSD-like carbohydrate 40.7 80 0.0027 25.9 6.9 48 119-166 175-233 (495)
363 3snx_A SUSD homolog, putative 40.0 67 0.0023 26.1 6.3 32 100-131 189-220 (460)
364 3qnk_A Putative lipoprotein; a 40.0 69 0.0024 26.4 6.5 29 136-164 182-210 (517)
365 1utg_A Uteroglobin; steroid bi 38.7 44 0.0015 19.5 3.7 45 156-200 18-62 (70)
366 2zan_A Vacuolar protein sortin 38.7 6.5 0.00022 32.0 0.0 33 66-98 7-39 (444)
367 3kez_A Putative sugar binding 38.3 74 0.0025 25.8 6.3 46 119-164 171-224 (461)
368 2oo2_A Hypothetical protein AF 38.2 69 0.0023 19.6 4.9 31 64-94 29-59 (86)
369 2wvi_A Mitotic checkpoint seri 38.1 99 0.0034 21.4 11.5 79 99-183 63-144 (164)
370 2xze_A STAM-binding protein; h 37.5 94 0.0032 21.0 5.8 37 62-98 32-68 (146)
371 3umh_A Amyloid beta A4 protein 36.8 1.2E+02 0.0041 22.0 9.2 83 102-185 86-175 (211)
372 1qsa_A Protein (soluble lytic 36.7 2E+02 0.0068 24.5 10.0 108 75-183 219-332 (618)
373 3jq1_A SUSD superfamily protei 35.5 61 0.0021 26.5 5.4 31 100-130 178-208 (481)
374 3u84_A Menin; MLL, JUND, ledgf 35.5 1.7E+02 0.0057 24.0 7.5 41 89-129 298-345 (550)
375 2npu_A FKBP12-rapamycin comple 34.6 77 0.0026 20.9 4.7 53 78-130 48-102 (126)
376 1wfd_A Hypothetical protein 15 33.0 86 0.003 19.3 7.0 17 147-163 26-42 (93)
377 3bu8_A Telomeric repeat-bindin 32.8 57 0.002 23.9 4.1 62 119-180 89-158 (235)
378 2v6x_A Vacuolar protein sortin 32.5 82 0.0028 18.8 7.4 20 145-164 22-41 (85)
379 2yin_A DOCK2, dedicator of cyt 30.0 1.9E+02 0.0065 23.4 7.4 23 73-95 38-60 (436)
380 3hdx_A SUSD homolog, SUSD supe 30.0 1.4E+02 0.0048 24.2 6.7 29 137-165 198-226 (478)
381 3bqo_A Telomeric repeat-bindin 29.8 28 0.00096 25.2 2.1 37 143-179 124-160 (211)
382 2cwy_A Hypothetical protein TT 29.6 1E+02 0.0035 19.0 5.5 56 107-164 6-67 (94)
383 2yhe_A SEC-alkyl sulfatase; hy 34.4 12 0.00042 32.3 0.0 52 103-154 462-513 (668)
384 3snx_A SUSD homolog, putative 28.0 1E+02 0.0036 25.0 5.6 30 136-165 191-220 (460)
385 4aez_C MAD3, mitotic spindle c 27.9 1.8E+02 0.0061 21.3 7.2 63 99-167 117-181 (223)
386 2ca5_A MXIH; transport protein 27.7 1.1E+02 0.0037 18.7 6.1 28 152-179 26-53 (85)
387 3dza_A Uncharacterized putativ 27.6 1.7E+02 0.0057 20.9 8.4 60 71-130 109-178 (191)
388 2qx5_A Nucleoporin NIC96; mRNA 27.1 3E+02 0.01 23.7 9.2 30 139-169 539-570 (661)
389 2g0u_A Type III secretion syst 26.7 1.2E+02 0.0041 18.8 7.1 42 151-192 31-72 (92)
390 3efz_A 14-3-3 protein; 14-3-3, 24.7 2.3E+02 0.0078 21.4 6.6 52 114-165 171-226 (268)
391 4b4t_O 26S proteasome regulato 24.2 2.6E+02 0.0091 22.0 10.4 85 80-164 86-197 (393)
392 2vkj_A TM1634; membrane protei 24.2 1.3E+02 0.0046 18.6 6.7 30 137-166 54-83 (106)
393 2e2a_A Protein (enzyme IIA); h 24.1 1.4E+02 0.0048 19.0 4.4 31 68-98 18-48 (105)
394 1wcr_A PTS system, N, N'-diace 23.5 1.5E+02 0.005 18.8 4.4 31 68-98 16-46 (103)
395 3qnk_A Putative lipoprotein; a 23.1 2.4E+02 0.008 23.2 6.9 25 105-129 185-209 (517)
396 3jq1_A SUSD superfamily protei 22.7 97 0.0033 25.3 4.4 46 119-164 155-208 (481)
397 3i4g_A SUSD-like carbohydrate 22.5 2.1E+02 0.007 23.7 6.4 29 136-164 198-226 (528)
398 3hdx_A SUSD homolog, SUSD supe 22.3 95 0.0033 25.3 4.3 31 101-131 196-226 (478)
399 4gof_A Small glutamine-rich te 22.2 60 0.0021 17.8 2.1 19 152-170 30-48 (52)
400 3ph0_C ASCG; type III secretio 22.0 1.2E+02 0.004 17.1 6.2 49 107-156 11-60 (61)
401 3k1s_A PTS system, cellobiose- 21.5 1.7E+02 0.0057 18.8 4.4 31 68-98 20-50 (109)
402 3l8r_A PTCA, putative PTS syst 20.3 1.8E+02 0.0061 19.0 4.4 31 68-98 35-65 (120)
403 1xkm_A Distinctin chain A; por 20.3 43 0.0015 14.9 1.0 14 1-14 4-17 (26)
404 3rk3_E Complexin-1; snare prot 20.1 1.3E+02 0.0044 16.9 4.5 31 167-197 5-35 (63)
No 1
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.98 E-value=3.9e-30 Score=206.33 Aligned_cols=200 Identities=33% Similarity=0.515 Sum_probs=191.8
Q ss_pred cchHHHHHHhccccccEEEEEecccc-cccCCccc-ccCCCceEEEEEEEccccCCCCccCCCHHHHHHHHHHHHHHhHH
Q 046569 2 VNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSE-LVCANSVLYYEVTLIDFTKEKPFWKMDTHEKIEACERKKHDGNL 79 (202)
Q Consensus 2 v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~ 79 (202)
++.+|+.++..|+.||++.+.++|.+ |+..|... .+|+++.+.|.+.+..+......+.......+..+..+...|+.
T Consensus 77 ~~~~~e~al~~~~~Ge~~~l~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~ 156 (336)
T 1p5q_A 77 LPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTV 156 (336)
T ss_dssp CCHHHHHHHTTCCTTCEEEEEECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEECCCCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHhcCCCCCeEEEEECCccccCcCCCCccCCCCCCeEEEEEEEeecccccchhcCCHHHHHHHHHHHHHHHHH
Confidence 58899999999999999999999999 99999665 69999999999999999999999999999999999999999999
Q ss_pred HHHcCcHHHHHHHHHHHHH--hHH---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHH
Q 046569 80 LFRAGKYWRASKKYEKATN--GLR---------------LSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRR 142 (202)
Q Consensus 80 ~~~~~~~~~A~~~y~~al~--~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 142 (202)
++..|+|++|+..|.+++. |.. ..++.++|.||..+|+|++|+.+|+++++++|+++.+++++
T Consensus 157 ~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l 236 (336)
T 1p5q_A 157 YFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRR 236 (336)
T ss_dssp HHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 9999999999999999999 555 68999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 046569 143 SQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSMLSKM 201 (202)
Q Consensus 143 g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~ 201 (202)
|.+|..+|++++|+.+|++++.++|++..+...+..+...+.+..+++++.|++||+++
T Consensus 237 g~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~ 295 (336)
T 1p5q_A 237 GEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERL 295 (336)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999875
No 2
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.97 E-value=6.1e-30 Score=213.02 Aligned_cols=202 Identities=32% Similarity=0.567 Sum_probs=185.1
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCcc-cccCCCceEEEEEEEccccCCCCccCCCHHHHHHHHHHHHHHhH
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVS-ELVCANSVLYYEVTLIDFTKEKPFWKMDTHEKIEACERKKHDGN 78 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~a~~~~~~g~ 78 (202)
+|+.+++.++..|+.||++.+.++|.+ |+..|.. ..+|++..+.|.+.+..+.+....|.+.....+..+..++..|+
T Consensus 197 ~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~ 276 (457)
T 1kt0_A 197 DIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGT 276 (457)
T ss_dssp TCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEECCCCGGGSCHHHHHHHHHHHHHHHH
T ss_pred cCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCCCEEEEEhhhhhcccCcchhhcCHHHHHHHHHHHHHHHH
Confidence 378999999999999999999999999 9999854 47999999999999999999999999999999999999999999
Q ss_pred HHHHcCcHHHHHHHHHHHHH--hHH---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHH
Q 046569 79 LLFRAGKYWRASKKYEKATN--GLR---------------LSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFR 141 (202)
Q Consensus 79 ~~~~~~~~~~A~~~y~~al~--~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 141 (202)
.+++.|+|.+|+..|.+|+. |.. ..+|+|+|.||+++|+|++|+.+|+++++++|+++.+|++
T Consensus 277 ~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~ 356 (457)
T 1kt0_A 277 VYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYR 356 (457)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHH
Confidence 99999999999999999999 555 7899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Q 046569 142 RSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSMLSKMG 202 (202)
Q Consensus 142 ~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~~ 202 (202)
+|.+|..+|++++|+.+|++++.++|++..+...+..+...+.+..++++..|++||+++.
T Consensus 357 ~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~f~k~~ 417 (457)
T 1kt0_A 357 RGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMFKKFA 417 (457)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999999999999999999999999863
No 3
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.97 E-value=5.5e-31 Score=211.43 Aligned_cols=200 Identities=32% Similarity=0.452 Sum_probs=153.3
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCc--ccccCCCceEEEEEEEccccCCC---CccCCCHHHHHHHHHHHH
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEV--SELVCANSVLYYEVTLIDFTKEK---PFWKMDTHEKIEACERKK 74 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~i~l~~~~~~~---~~~~~~~~~~~~~a~~~~ 74 (202)
+||+||+.++.+|+.||++.|.+++.+ ||..+. .+.||+++++.|.+.+..+.... ..|.+...+++..+..++
T Consensus 104 ~~i~g~e~~l~~m~~Ge~~~~~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~~~e~~~~~~~~~~~~~~~a~~~~ 183 (338)
T 2if4_A 104 KELAGLAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAADRRK 183 (338)
T ss_dssp GGGHHHHHHHHHCCBTCEEEEEECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEECCCCCBTTTBCCHHHHHHHHHHHH
T ss_pred cccHHHHHHHhcCCCCCeEEEEECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecCCccccccccCCHHHHHHHHHHHH
Confidence 389999999999999999999999999 999986 47899999999999999887543 467788999999999999
Q ss_pred HHhHHHHHcCcHHHHHHHHHHHHH--hHHH-----------------HHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC
Q 046569 75 HDGNLLFRAGKYWRASKKYEKATN--GLRL-----------------SCYLNNAACKLKLEDYSEASSLCTKVLELEPLN 135 (202)
Q Consensus 75 ~~g~~~~~~~~~~~A~~~y~~al~--~~~~-----------------~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 135 (202)
..|+.++..|+|.+|+..|.+++. |... .+++++|.||+++|+|++|+.+|+++++++|++
T Consensus 184 ~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~ 263 (338)
T 2if4_A 184 MDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKN 263 (338)
T ss_dssp HHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999998 5554 499999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 046569 136 VKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSMLSK 200 (202)
Q Consensus 136 ~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~ 200 (202)
+.+|+++|.+|..+|++++|+.+|++++.++|+++.++..+..+....+...+++++.|++||+.
T Consensus 264 ~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~ 328 (338)
T 2if4_A 264 PKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKG 328 (338)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHTTC------------------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999999999999999999999999999888888888999999999975
No 4
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.93 E-value=6.6e-25 Score=157.64 Aligned_cols=138 Identities=28% Similarity=0.378 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--------------------hHHHHHHHHHHHHHHHhcCHHHHH
Q 046569 63 THEKIEACERKKHDGNLLFRAGKYWRASKKYEKATN--------------------GLRLSCYLNNAACKLKLEDYSEAS 122 (202)
Q Consensus 63 ~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--------------------~~~~~~~~~~a~~~~~~~~~~~A~ 122 (202)
++++...+..+.+.|+.+++.|+|.+|+..|.+++. |....++.++|.||+.+|+|++|+
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~ 83 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAE 83 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 345677899999999999999999999999999997 234579999999999999999999
Q ss_pred HHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 046569 123 SLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNR-DVKLVYMELKENQREYAKYQAEIFGSMLSK 200 (202)
Q Consensus 123 ~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~ 200 (202)
.+|+++++++|+++.+|+++|.++..+|++++|+.+|++++.++|+++ .+...+..+...+++..+++++.|++||+.
T Consensus 84 ~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~ 162 (162)
T 3rkv_A 84 ETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKADSRVTYSKMFQP 162 (162)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTSSCC--------
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999999998 889999999999999999999999999973
No 5
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.91 E-value=4.3e-23 Score=142.82 Aligned_cols=114 Identities=25% Similarity=0.407 Sum_probs=109.5
Q ss_pred HHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHH
Q 046569 67 IEACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQ 144 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 144 (202)
+..+..++++|+.+++.|+|++|+..|+++|+ |.++.++.++|.+|..+|++++|+.+|+++++++|+++.+|+++|.
T Consensus 10 P~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~ 89 (126)
T 4gco_A 10 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAA 89 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 45688999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 046569 145 AYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELK 180 (202)
Q Consensus 145 ~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 180 (202)
++..+|++++|+.+|+++++++|+|+.++..+..+.
T Consensus 90 ~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 90 CLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 999999999999999999999999999999887763
No 6
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.90 E-value=2.5e-22 Score=148.63 Aligned_cols=155 Identities=29% Similarity=0.386 Sum_probs=130.2
Q ss_pred EEEccccCCCCccCCCHHHHHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHH----------------HHHHHH
Q 046569 47 VTLIDFTKEKPFWKMDTHEKIEACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRL----------------SCYLNN 108 (202)
Q Consensus 47 i~l~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~----------------~~~~~~ 108 (202)
..+..+......|.++..+....+..+...|+.++..|+|++|+..|.+++. |..+ .++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 94 (198)
T 2fbn_A 15 ENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNL 94 (198)
T ss_dssp -------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHH
Confidence 4556677788899999999999999999999999999999999999999998 4443 899999
Q ss_pred HHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 046569 109 AACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAK 188 (202)
Q Consensus 109 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~ 188 (202)
|.+|..+|+|++|+.+|++++.++|+++.+++++|.++..+|++++|+..|++++.++|+++.+...+..+...+.+..+
T Consensus 95 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~ 174 (198)
T 2fbn_A 95 ATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARK 174 (198)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhcC
Q 046569 189 YQAEIFGSMLSKM 201 (202)
Q Consensus 189 ~~~~~~~~~f~~~ 201 (202)
.++..|++||+..
T Consensus 175 ~~~~~~~~~f~~~ 187 (198)
T 2fbn_A 175 KDKLTFGGMFDKG 187 (198)
T ss_dssp -------------
T ss_pred HHHHHHHHHhccc
Confidence 9999999999864
No 7
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.88 E-value=3.9e-22 Score=142.24 Aligned_cols=127 Identities=14% Similarity=0.092 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hH-------H-----HHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 046569 63 THEKIEACERKKHDGNLLFRAGKYWRASKKYEKATN--GL-------R-----LSCYLNNAACKLKLEDYSEASSLCTKV 128 (202)
Q Consensus 63 ~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~-------~-----~~~~~~~a~~~~~~~~~~~A~~~~~~a 128 (202)
+-.....+..+...|+.+++.|+|++|+..|++||. |. . ..+|+|+|.++.++|+|++|+.+|+++
T Consensus 4 ~~~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kA 83 (159)
T 2hr2_A 4 PLKEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKA 83 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 333456788999999999999999999999999999 55 3 349999999999999999999999999
Q ss_pred hhh-------CCCChHHH----HHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 046569 129 LEL-------EPLNVKAL----FRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKY 189 (202)
Q Consensus 129 l~~-------~p~~~~~~----~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~ 189 (202)
|++ +|+++++| +++|.++..+|++++|+.+|+++++++|++..+...+..+++.++....+
T Consensus 84 L~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~~~~k 155 (159)
T 2hr2_A 84 LHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDRIAQ 155 (159)
T ss_dssp HHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHHHHHH
T ss_pred HHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 999 99999999 99999999999999999999999999999999999999998888765543
No 8
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.85 E-value=6e-20 Score=148.96 Aligned_cols=138 Identities=31% Similarity=0.540 Sum_probs=127.5
Q ss_pred CHHHHHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH------------------hHHHHHHHHHHHHHHHhcCHHHHHH
Q 046569 62 DTHEKIEACERKKHDGNLLFRAGKYWRASKKYEKATN------------------GLRLSCYLNNAACKLKLEDYSEASS 123 (202)
Q Consensus 62 ~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~------------------~~~~~~~~~~a~~~~~~~~~~~A~~ 123 (202)
........+..+...|+.+++.|+|++|+..|+++++ +....++.++|.+|+++|+|++|+.
T Consensus 215 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~ 294 (370)
T 1ihg_A 215 DVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVD 294 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHH
Confidence 4677888899999999999999999999999999985 4667899999999999999999999
Q ss_pred HHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 046569 124 LCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSMLS 199 (202)
Q Consensus 124 ~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~ 199 (202)
+|+++++++|+++.+++++|.+|..+|++++|+.+|+++++++|++..+...+..+...+++..++++..|++||+
T Consensus 295 ~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~~~~kmf~ 370 (370)
T 1ihg_A 295 SCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKAAYAKMFA 370 (370)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999995
No 9
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.84 E-value=9.2e-20 Score=125.09 Aligned_cols=115 Identities=24% Similarity=0.363 Sum_probs=110.3
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHH
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAY 146 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 146 (202)
.+..+...|..++..|+|++|+..|.+++. |.++.++.++|.+|..+|++++|+.+|+++++++|+++.+++.+|.++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQ 82 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 477889999999999999999999999999 899999999999999999999999999999999999999999999999
Q ss_pred hcCCCHHHHHHHHHHHHhcC------CCCHHHHHHHHHHHHHH
Q 046569 147 LKTSELEKDEADIKRALTID------PNNRDVKLVYMELKENQ 183 (202)
Q Consensus 147 ~~~~~~~~A~~~~~~a~~l~------p~~~~~~~~l~~~~~~~ 183 (202)
..+|++++|+.+|++++.++ |+++.+...+..+...+
T Consensus 83 ~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 83 IAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 99999999999999999999 99999999998887654
No 10
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.84 E-value=7e-20 Score=126.64 Aligned_cols=113 Identities=23% Similarity=0.317 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCCh-------
Q 046569 66 KIEACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNV------- 136 (202)
Q Consensus 66 ~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~------- 136 (202)
..+.+..+++.|+.+++.|+|++|+..|++||+ |..+.+|.++|.+|..+|+|++|+.+|+++++++|++.
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a 83 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIA 83 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHH
Confidence 356688899999999999999999999999999 99999999999999999999999999999999988663
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 046569 137 KALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMEL 179 (202)
Q Consensus 137 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~ 179 (202)
.+++++|.++..+|++++|+..|++++...|+ ++....+..+
T Consensus 84 ~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~l 125 (127)
T 4gcn_A 84 KAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKEL 125 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHHh
Confidence 58999999999999999999999999999885 5555555444
No 11
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.82 E-value=5.5e-19 Score=125.96 Aligned_cols=104 Identities=12% Similarity=0.087 Sum_probs=100.4
Q ss_pred HHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHH
Q 046569 67 IEACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQ 144 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 144 (202)
+..+..++..|..++..|+|++|+..|.+++. |.++.+|.++|.+|..+|+|++|+.+|++++.++|+++.+|+++|.
T Consensus 33 p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~ 112 (151)
T 3gyz_A 33 DDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQ 112 (151)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHH
Confidence 45677899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHhcCCCCH
Q 046569 145 AYLKTSELEKDEADIKRALTIDPNNR 170 (202)
Q Consensus 145 ~~~~~~~~~~A~~~~~~a~~l~p~~~ 170 (202)
+|..+|++++|+.+|++++.+.|+.+
T Consensus 113 ~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 113 CQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999876
No 12
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.81 E-value=1.3e-18 Score=122.10 Aligned_cols=123 Identities=15% Similarity=0.132 Sum_probs=113.1
Q ss_pred HHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHH
Q 046569 67 IEACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQ 144 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 144 (202)
+.....+...|..++..|+|++|+..|.+++. |.++.++.++|.+|..+|++++|+.+|++++.++|+++.+++.+|.
T Consensus 15 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 94 (142)
T 2xcb_A 15 EDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAE 94 (142)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHH
Confidence 34467788999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 046569 145 AYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKY 189 (202)
Q Consensus 145 ~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~ 189 (202)
++..+|++++|+.+|++++.++|+++........+...++...++
T Consensus 95 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l~~~ 139 (142)
T 2xcb_A 95 CHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAVTAR 139 (142)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999988887777777777665433
No 13
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.81 E-value=1.1e-18 Score=125.15 Aligned_cols=121 Identities=17% Similarity=0.149 Sum_probs=112.4
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHH
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQA 145 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 145 (202)
..+..+...|..++..|+|++|+..|.+++. |..+.++.++|.+|..+|+|++|+.+|+++++++|+++.+|+++|.+
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 88 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLA 88 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4578899999999999999999999999999 88999999999999999999999999999999999999999999999
Q ss_pred HhcCCCHHHHHHHHHHHHhcCCCCHH--HHHHHHHHHHHHHHHHH
Q 046569 146 YLKTSELEKDEADIKRALTIDPNNRD--VKLVYMELKENQREYAK 188 (202)
Q Consensus 146 ~~~~~~~~~A~~~~~~a~~l~p~~~~--~~~~l~~~~~~~~~~~~ 188 (202)
+..+|++++|+.+|++++.++|++.. ....+..++.++++...
T Consensus 89 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~ 133 (164)
T 3sz7_A 89 RFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEEANR 133 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999976 77777777777766543
No 14
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.80 E-value=1.3e-18 Score=123.31 Aligned_cols=121 Identities=13% Similarity=0.131 Sum_probs=110.2
Q ss_pred HHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHH
Q 046569 67 IEACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQ 144 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 144 (202)
+.....+...|..++..|+|++|+..|.+++. |.++.+++++|.++..+|+|++|+.+|++++.++|+++.+++++|.
T Consensus 18 p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 97 (148)
T 2vgx_A 18 SDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAE 97 (148)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 34567888999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 046569 145 AYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYA 187 (202)
Q Consensus 145 ~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~ 187 (202)
++..+|++++|+.+|++++.++|+++........+...++..+
T Consensus 98 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l~ 140 (148)
T 2vgx_A 98 CLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSMLEAIK 140 (148)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHC-
T ss_pred HHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHHHHH
Confidence 9999999999999999999999998877666666666665433
No 15
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.80 E-value=1.1e-19 Score=151.16 Aligned_cols=196 Identities=20% Similarity=0.249 Sum_probs=151.4
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCcccccCCCceEEEEEEEccccCCCCc---------------cC----
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSELVCANSVLYYEVTLIDFTKEKPF---------------WK---- 60 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~---------------~~---- 60 (202)
+|++||+.++.+|+.||+..|.+++.+ ||..|.++.||+++++.|.|++..+...... +.
T Consensus 85 ~~i~g~~~~l~~m~~Ge~~~~~i~~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~~~~~~~dg~~~k~i~~~g~~~~~p~~ 164 (457)
T 1kt0_A 85 QVIKAWDIGVATMKRGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNE 164 (457)
T ss_dssp TSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEECEETTSSSSEEEEEEECCBCSCCCCT
T ss_pred chhhHHHHHHhhCCCCCEEEEEEChHHhccccCCCCCCCCCCcEEEEEeeceeecccccCCcceEEEEEecCCCCCCCCC
Confidence 489999999999999999999999999 9999988899999999999999876532000 00
Q ss_pred -------------------------CC------HHHHHHHHHHHHHH-----------------hHHHH-----------
Q 046569 61 -------------------------MD------THEKIEACERKKHD-----------------GNLLF----------- 81 (202)
Q Consensus 61 -------------------------~~------~~~~~~~a~~~~~~-----------------g~~~~----------- 81 (202)
+. ....+..+...... |...+
T Consensus 165 g~~V~v~y~g~~~g~~f~~~~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~ 244 (457)
T 1kt0_A 165 GATVEIHLEGRCGGRMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYE 244 (457)
T ss_dssp TCEEEEEEEEEETTEEEEEEEEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEE
T ss_pred CCEEEEEEEEEeCCeEEecCceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCCCEEEEE
Confidence 00 01112222211111 11100
Q ss_pred -HcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC---------------hHHHHHHH
Q 046569 82 -RAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLN---------------VKALFRRS 143 (202)
Q Consensus 82 -~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~~g 143 (202)
..++|++|+..|..++. +....++.++|.++++.|+|++|+..|++++.++|.+ ..+|+++|
T Consensus 245 ~~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla 324 (457)
T 1kt0_A 245 VTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLA 324 (457)
T ss_dssp EEEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHH
Confidence 22345566666666665 7889999999999999999999999999999999988 69999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 144 QAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 144 ~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
.||..+|++++|+.+|++++.++|++..+...+..+...+.+..+. ...|.+.
T Consensus 325 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A-~~~~~~a 377 (457)
T 1kt0_A 325 MCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESA-KGDFEKV 377 (457)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHH-HHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHH-HHHHHHH
Confidence 9999999999999999999999999999999999888777666543 2344443
No 16
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.79 E-value=1.4e-18 Score=123.36 Aligned_cols=114 Identities=15% Similarity=0.066 Sum_probs=104.5
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHH
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQA 145 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 145 (202)
.....+...|..++..|+|++|+..|.++++ |.++.+|.++|.+|..+|++++|+.+|+++++++|+++.+++++|.+
T Consensus 29 ~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 108 (150)
T 4ga2_A 29 QKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAEL 108 (150)
T ss_dssp HHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4456678899999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HhcCCCHHHHHHH-HHHHHhcCCCCHHHHHHHHHHHH
Q 046569 146 YLKTSELEKDEAD-IKRALTIDPNNRDVKLVYMELKE 181 (202)
Q Consensus 146 ~~~~~~~~~A~~~-~~~a~~l~p~~~~~~~~l~~~~~ 181 (202)
+...|++++|... ++++++++|+++.+...+..+..
T Consensus 109 ~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~ 145 (150)
T 4ga2_A 109 LCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLD 145 (150)
T ss_dssp HHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 9999999887765 59999999999999888777654
No 17
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.77 E-value=6.8e-18 Score=116.80 Aligned_cols=120 Identities=28% Similarity=0.380 Sum_probs=111.5
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHH
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAY 146 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 146 (202)
.+..+...|..++..|+|++|+..|.+++. |..+.++.++|.++..+|++++|+.++++++.++|+++.+++.+|.++
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 87 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 87 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHH
Confidence 367788999999999999999999999999 889999999999999999999999999999999999999999999999
Q ss_pred hcCCCHHHHHHHHHHHHhcCCC-----CHHHHHHHHHHHHHHHHHHH
Q 046569 147 LKTSELEKDEADIKRALTIDPN-----NRDVKLVYMELKENQREYAK 188 (202)
Q Consensus 147 ~~~~~~~~A~~~~~~a~~l~p~-----~~~~~~~l~~~~~~~~~~~~ 188 (202)
...|++++|+..|++++.++|+ +..+...+..+........+
T Consensus 88 ~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~e 134 (137)
T 3q49_B 88 LEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIE 134 (137)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998 78888888888776655443
No 18
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.77 E-value=6.3e-17 Score=120.68 Aligned_cols=114 Identities=14% Similarity=0.105 Sum_probs=108.1
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHH----------------HHHHHHHhcCHHHHHHHHHHHhhh
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLN----------------NAACKLKLEDYSEASSLCTKVLEL 131 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~----------------~a~~~~~~~~~~~A~~~~~~al~~ 131 (202)
+..+...|..++..|+|++|+..|.+++. |.++.+++. +|.+|..+|++++|+..|++++++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 56778899999999999999999999999 999999999 999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 046569 132 EPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQ 183 (202)
Q Consensus 132 ~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 183 (202)
+|+++.+++.+|.++...|++++|+.+|++++.++|+++.+...+..+.-..
T Consensus 84 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~ 135 (208)
T 3urz_A 84 APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLT 135 (208)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998876443
No 19
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.76 E-value=2.4e-18 Score=122.20 Aligned_cols=112 Identities=14% Similarity=0.077 Sum_probs=102.4
Q ss_pred HhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHH
Q 046569 76 DGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELE 153 (202)
Q Consensus 76 ~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~ 153 (202)
.|..+..+|++++|+..|++++. |..+..++++|.+|+.+|+|++|+.+|+++++++|+++.+|+.+|.++..+|+++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~ 82 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTD 82 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchH
Confidence 57777888999999999999999 8899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 046569 154 KDEADIKRALTIDPNNRDVKLVYMELKENQREYA 187 (202)
Q Consensus 154 ~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~ 187 (202)
+|+.+|+++++++|+++.+...+..+.....+..
T Consensus 83 ~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~ 116 (150)
T 4ga2_A 83 KAVECYRRSVELNPTQKDLVLKIAELLCKNDVTD 116 (150)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChH
Confidence 9999999999999999999999998877765543
No 20
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.74 E-value=1.5e-16 Score=106.25 Aligned_cols=113 Identities=22% Similarity=0.221 Sum_probs=107.5
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHH
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAY 146 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 146 (202)
.+..+...|..++..|++++|+..|.+++. |..+.++.++|.++..+|++++|+..+++++..+|+++.+++.+|.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 467788999999999999999999999999 888999999999999999999999999999999999999999999999
Q ss_pred hcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 046569 147 LKTSELEKDEADIKRALTIDPNNRDVKLVYMELKE 181 (202)
Q Consensus 147 ~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 181 (202)
...|++++|...|++++.++|+++.+...+..+.+
T Consensus 83 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 83 EFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 99999999999999999999999999988887754
No 21
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.74 E-value=5.8e-17 Score=141.46 Aligned_cols=122 Identities=14% Similarity=0.114 Sum_probs=91.3
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHH
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQA 145 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 145 (202)
..+..+...|+.+...|++++|+..|++||+ |.+..+++++|.+|..+|++++|+.+|+++++++|+++.+|+++|.+
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~ 86 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNT 86 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4466777777777777777777777777777 77777777777777777777777777777777777777777777777
Q ss_pred HhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 046569 146 YLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKY 189 (202)
Q Consensus 146 ~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~ 189 (202)
+..+|++++|+.+|+++++++|++..+...+..+...+.+..+.
T Consensus 87 l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eA 130 (723)
T 4gyw_A 87 LKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEA 130 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 77777777777777777777777777777777776666555433
No 22
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.73 E-value=9e-16 Score=108.93 Aligned_cols=121 Identities=23% Similarity=0.338 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHH
Q 046569 63 THEKIEACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALF 140 (202)
Q Consensus 63 ~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 140 (202)
.......+..+...|..++..|+|++|+..|.+++. |....++.++|.++..+|++++|+..+.+++.++|.++.+++
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 85 (166)
T 1a17_A 6 ADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYY 85 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 345667889999999999999999999999999999 888999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 046569 141 RRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQ 183 (202)
Q Consensus 141 ~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 183 (202)
.+|.++...|++++|+..|++++.++|.+..+...+..+....
T Consensus 86 ~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~ 128 (166)
T 1a17_A 86 RRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIV 128 (166)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998887766664433
No 23
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.73 E-value=4.3e-16 Score=105.83 Aligned_cols=121 Identities=26% Similarity=0.290 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHH
Q 046569 64 HEKIEACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFR 141 (202)
Q Consensus 64 ~~~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 141 (202)
......+..+...|..++..|++++|+..|.+++. |..+.++.++|.++...|++++|+..+.+++..+|+++.+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 85 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGR 85 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hcchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHH
Confidence 34456688899999999999999999999999998 8889999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 046569 142 RSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQR 184 (202)
Q Consensus 142 ~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~ 184 (202)
+|.++...|++++|...|++++.++|+++.+...+..+...+.
T Consensus 86 ~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~ 128 (131)
T 2vyi_A 86 MGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLR 128 (131)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999988888776553
No 24
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.72 E-value=5.5e-17 Score=111.10 Aligned_cols=100 Identities=11% Similarity=0.080 Sum_probs=90.5
Q ss_pred HHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcC
Q 046569 72 RKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKT 149 (202)
Q Consensus 72 ~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~ 149 (202)
.+...|..++..|++++|+..|.+++. |.++.+++++|.++..+|++++|+..|+++++++|+++.+++.+|.++...
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 457889999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCCCHH
Q 046569 150 SELEKDEADIKRALTIDPNNRD 171 (202)
Q Consensus 150 ~~~~~A~~~~~~a~~l~p~~~~ 171 (202)
|++++|+..|++++.++|++..
T Consensus 99 g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 99 HNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHC-------
T ss_pred CCHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999998754
No 25
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.72 E-value=1.9e-16 Score=108.32 Aligned_cols=113 Identities=10% Similarity=0.083 Sum_probs=103.3
Q ss_pred HHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHH---HHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC---hHHHHHHH
Q 046569 72 RKKHDGNLLFRAGKYWRASKKYEKATN--GLRL---SCYLNNAACKLKLEDYSEASSLCTKVLELEPLN---VKALFRRS 143 (202)
Q Consensus 72 ~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~~g 143 (202)
.+...|..++..|+|++|+..|.+++. |..+ .+++++|.++...|++++|+..+++++..+|++ +.+++.+|
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la 83 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLG 83 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHH
Confidence 467889999999999999999999999 5444 899999999999999999999999999999999 88999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 046569 144 QAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQR 184 (202)
Q Consensus 144 ~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~ 184 (202)
.++..+|++++|...|++++...|+++.+......+.....
T Consensus 84 ~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~ 124 (129)
T 2xev_A 84 LSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSIRL 124 (129)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHC-
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHh
Confidence 99999999999999999999999999988887777766543
No 26
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.72 E-value=1e-16 Score=120.26 Aligned_cols=116 Identities=17% Similarity=0.162 Sum_probs=70.4
Q ss_pred HHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHh-----------cCHHHHHHHHHHHhhhCCCChH
Q 046569 71 ERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKL-----------EDYSEASSLCTKVLELEPLNVK 137 (202)
Q Consensus 71 ~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~-----------~~~~~A~~~~~~al~~~p~~~~ 137 (202)
..+...|..+...|++++|+..|.++++ |.++.++.++|.++..+ |++++|+..++++++++|+++.
T Consensus 40 ~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~ 119 (217)
T 2pl2_A 40 EALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAP 119 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHH
Confidence 3445556666666666666666666665 55666666666666666 6666666666666666666666
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 046569 138 ALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYA 187 (202)
Q Consensus 138 ~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~ 187 (202)
+++.+|.++..+|++++|+..|++++.++ +++.+...+..+.....+..
T Consensus 120 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~ 168 (217)
T 2pl2_A 120 LHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLD 168 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHH
Confidence 66666666666666666666666666666 55666666665555554444
No 27
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=5.2e-16 Score=108.13 Aligned_cols=111 Identities=34% Similarity=0.530 Sum_probs=105.3
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHH---HHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHH
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLR---LSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQ 144 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 144 (202)
+..+...|..++..|+|++|+..|.+++. |.. ..++.++|.+|..+|++++|+..+++++.++|+++.+++.+|.
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 107 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQ 107 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHH
Confidence 67788999999999999999999999999 554 8999999999999999999999999999999999999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 046569 145 AYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELK 180 (202)
Q Consensus 145 ~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 180 (202)
++...|++++|..+|++++.++|++..+...+..+.
T Consensus 108 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 108 ALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999998887764
No 28
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.71 E-value=5.4e-16 Score=105.47 Aligned_cols=117 Identities=23% Similarity=0.304 Sum_probs=109.0
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC-------hHHH
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLN-------VKAL 139 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-------~~~~ 139 (202)
.+..+...|..++..|++++|+..|.+++. |..+.++.++|.++..+|++++|+.++.+++.+.|.+ +.++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 467788999999999999999999999999 8889999999999999999999999999999998877 8999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 046569 140 FRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREY 186 (202)
Q Consensus 140 ~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~ 186 (202)
+.+|.++...|++++|..+|++++.+.| ++.....+..+...+++.
T Consensus 83 ~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ 128 (131)
T 1elr_A 83 ARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKEQ 128 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999 688888888888777654
No 29
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.70 E-value=4e-16 Score=106.63 Aligned_cols=114 Identities=26% Similarity=0.348 Sum_probs=107.9
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHH
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAY 146 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 146 (202)
....+...|..++..|+|++|+..|.+++. |....++.++|.++...|++++|+..++++++.+|.++.+++.+|.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 94 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAAL 94 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 367888999999999999999999999999 888999999999999999999999999999999999999999999999
Q ss_pred hcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 046569 147 LKTSELEKDEADIKRALTIDPNNRDVKLVYMELKEN 182 (202)
Q Consensus 147 ~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 182 (202)
...|++++|+..|++++.++|.+..+...+..+...
T Consensus 95 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 130 (133)
T 2lni_A 95 EAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMA 130 (133)
T ss_dssp HHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 999999999999999999999999888888877654
No 30
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.69 E-value=3.1e-16 Score=136.91 Aligned_cols=119 Identities=15% Similarity=0.158 Sum_probs=112.4
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHH
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAY 146 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 146 (202)
.+..+...|..+.+.|++++|+..|++||+ |..+.+++++|.+|..+|++++|+.+|+++++++|+++.+|+++|.+|
T Consensus 42 ~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~ 121 (723)
T 4gyw_A 42 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIH 121 (723)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 456788999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred hcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 046569 147 LKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYA 187 (202)
Q Consensus 147 ~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~ 187 (202)
..+|++++|+.+|+++++++|+++.+...+..+...+.+..
T Consensus 122 ~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~ 162 (723)
T 4gyw_A 122 KDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWT 162 (723)
T ss_dssp HHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCT
T ss_pred HHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHH
Confidence 99999999999999999999999999999998877664433
No 31
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.69 E-value=1e-15 Score=114.97 Aligned_cols=118 Identities=18% Similarity=0.181 Sum_probs=105.5
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--h-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHH
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--G-LRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAY 146 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 146 (202)
+..+...|..++..|+|++|+..|.+++. | ....+++++|.++..+|++++|+.+++++++.+|+++.+++.+|.++
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 86 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAY 86 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence 36788999999999999999999999999 5 88899999999999999999999999999999999999999999999
Q ss_pred hcCCCHHHHHHHHHHHHhcCCCCHHH-------HHHHHHHHHHHHHHH
Q 046569 147 LKTSELEKDEADIKRALTIDPNNRDV-------KLVYMELKENQREYA 187 (202)
Q Consensus 147 ~~~~~~~~A~~~~~~a~~l~p~~~~~-------~~~l~~~~~~~~~~~ 187 (202)
..+|++++|+..|++++.++|+++.. ...+..+.....+..
T Consensus 87 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~ 134 (228)
T 4i17_A 87 RDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIE 134 (228)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHH
Confidence 99999999999999999999999954 555555544444433
No 32
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.68 E-value=2e-15 Score=113.26 Aligned_cols=112 Identities=20% Similarity=0.143 Sum_probs=57.8
Q ss_pred HHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcC
Q 046569 72 RKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKT 149 (202)
Q Consensus 72 ~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~ 149 (202)
.+...|..++..|++++|+..|++++. |.++.++.++|.++..+|++++|+..++++++++|+++.+++.+|.++...
T Consensus 7 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~ 86 (217)
T 2pl2_A 7 NPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVAL 86 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 344445555555555555555555554 455555555555555555555555555555555555555555555555555
Q ss_pred -----------CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 046569 150 -----------SELEKDEADIKRALTIDPNNRDVKLVYMELKENQ 183 (202)
Q Consensus 150 -----------~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 183 (202)
|++++|+..|++++.++|+++.+...+..+...+
T Consensus 87 ~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~ 131 (217)
T 2pl2_A 87 YRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALL 131 (217)
T ss_dssp HHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred hhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHc
Confidence 5555555555555555555555555444444433
No 33
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.68 E-value=2.8e-15 Score=108.82 Aligned_cols=127 Identities=13% Similarity=0.088 Sum_probs=90.4
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh----------------
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLEL---------------- 131 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---------------- 131 (202)
+..+...|+.++..|+|++|+..|+++++ |.++.++.++|.+|..+|++++|+..+.+++..
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANF 84 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 55677788888888888888888888887 666666666666666666666666655555444
Q ss_pred ------------------CCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 046569 132 ------------------EPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEI 193 (202)
Q Consensus 132 ------------------~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~ 193 (202)
+|.++.+++.+|.++..+|++++|+..|+++++++|.++.+...+..+...+.+..+... .
T Consensus 85 ~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~-~ 163 (184)
T 3vtx_A 85 MIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVK-Y 163 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH-H
T ss_pred HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHH-H
Confidence 566667777777888888888888888888888888888777777777777666554332 4
Q ss_pred HHhh
Q 046569 194 FGSM 197 (202)
Q Consensus 194 ~~~~ 197 (202)
|++.
T Consensus 164 ~~~a 167 (184)
T 3vtx_A 164 FKKA 167 (184)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 34
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.67 E-value=1e-14 Score=98.06 Aligned_cols=113 Identities=29% Similarity=0.404 Sum_probs=106.6
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHh
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYL 147 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 147 (202)
+..+...|..++..|++++|+..|.+++. |....++.++|.++...|++++|+..+++++..+|.++.+++.+|.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 88 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY 88 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 56778899999999999999999999998 7888999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 046569 148 KTSELEKDEADIKRALTIDPNNRDVKLVYMELKEN 182 (202)
Q Consensus 148 ~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 182 (202)
..|++++|...|++++.++|+++.+...+..+...
T Consensus 89 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 89 KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 99999999999999999999999999888877543
No 35
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.66 E-value=8.5e-16 Score=125.03 Aligned_cols=119 Identities=14% Similarity=0.042 Sum_probs=85.5
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHhhhCCCChHHHHHHHH
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLED-YSEASSLCTKVLELEPLNVKALFRRSQ 144 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~~g~ 144 (202)
..+..+...|..+...|++++|+..|.++|. |.+..+|+++|.++..+|+ +++|+.+|+++++++|+++.+|+++|.
T Consensus 95 ~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~ 174 (382)
T 2h6f_A 95 KFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRV 174 (382)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 3455666677777777777777777777777 7777777777777777775 777777777777777777777777777
Q ss_pred HHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 046569 145 AYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREY 186 (202)
Q Consensus 145 ~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~ 186 (202)
++..+|++++|+.+|++++.++|++..+...+..+...+.+.
T Consensus 175 ~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~ 216 (382)
T 2h6f_A 175 LVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLW 216 (382)
T ss_dssp HHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCC
T ss_pred HHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCCh
Confidence 777777777777777777777777777777776666655443
No 36
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.66 E-value=4.1e-16 Score=110.93 Aligned_cols=103 Identities=15% Similarity=0.158 Sum_probs=94.3
Q ss_pred HcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCH----------HHHHHHHHHHhhhCCCChHHHHHHHHHHhcC
Q 046569 82 RAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDY----------SEASSLCTKVLELEPLNVKALFRRSQAYLKT 149 (202)
Q Consensus 82 ~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~ 149 (202)
+.+.|++|+..|.+++. |.++.+|.++|.++..++++ ++|+..|+++++++|++..+|+++|.+|..+
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~l 93 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSF 93 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHh
Confidence 45789999999999999 99999999999999999876 5999999999999999999999999999988
Q ss_pred C-----------CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 046569 150 S-----------ELEKDEADIKRALTIDPNNRDVKLVYMELKENQR 184 (202)
Q Consensus 150 ~-----------~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~ 184 (202)
| ++++|+.+|++|++++|++...+..+..+.+.-+
T Consensus 94 g~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ka~e 139 (158)
T 1zu2_A 94 AFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQ 139 (158)
T ss_dssp HHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHH
T ss_pred cccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhCHh
Confidence 5 8999999999999999999998888877665443
No 37
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.65 E-value=1.9e-15 Score=122.96 Aligned_cols=114 Identities=13% Similarity=0.015 Sum_probs=109.0
Q ss_pred HHHHHHHHhHHHHHcCc-HHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHH
Q 046569 69 ACERKKHDGNLLFRAGK-YWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQA 145 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~-~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 145 (202)
.+..+..+|..+...|+ +++|+..|.++|. |.+..+|+++|.++..+|++++|+.+|+++++++|++..+|+++|.+
T Consensus 130 ~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~ 209 (382)
T 2h6f_A 130 NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWV 209 (382)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHH
Confidence 45667889999999997 9999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 046569 146 YLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKEN 182 (202)
Q Consensus 146 ~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 182 (202)
+..+|++++|+.+|++++.++|++..+...+..+...
T Consensus 210 ~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 210 IQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISN 246 (382)
T ss_dssp HHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988776
No 38
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.65 E-value=6.1e-15 Score=109.85 Aligned_cols=106 Identities=16% Similarity=0.155 Sum_probs=93.7
Q ss_pred HhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcC----
Q 046569 76 DGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKT---- 149 (202)
Q Consensus 76 ~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~---- 149 (202)
.|..++..|++++|+..|.++++ |.++.++.++|.+|..+|++++|+.+|+++++++|+++.+++++|.+|+..
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~ 139 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQE 139 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHH
Confidence 99999999999999999999999 999999999999999999999999999999999999999998888776433
Q ss_pred -------------------------------CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 046569 150 -------------------------------SELEKDEADIKRALTIDPNNRDVKLVYMELKEN 182 (202)
Q Consensus 150 -------------------------------~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 182 (202)
|++++|+.+|++++.++|++ .+...+.++.+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~-~~~~~l~~i~~~ 202 (208)
T 3urz_A 140 KKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST-EAQKTLDKILRI 202 (208)
T ss_dssp HHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH-HHHHHHHHHHHH
Confidence 46889999999999999974 455556655433
No 39
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.64 E-value=1.2e-15 Score=103.43 Aligned_cols=98 Identities=14% Similarity=0.134 Sum_probs=87.2
Q ss_pred HcCcHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHH
Q 046569 82 RAGKYWRASKKYEKATN-----GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDE 156 (202)
Q Consensus 82 ~~~~~~~A~~~y~~al~-----~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~ 156 (202)
..|++++|+..|.++++ |..+.++.++|.+|..+|+|++|+..++++++++|+++.+++++|.++..+|++++|+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 35889999999999997 7888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHH
Q 046569 157 ADIKRALTIDPNNRDVKLVYMEL 179 (202)
Q Consensus 157 ~~~~~a~~l~p~~~~~~~~l~~~ 179 (202)
..|++++.+.|+++.+......+
T Consensus 82 ~~~~~al~~~p~~~~~~~~~~ai 104 (117)
T 3k9i_A 82 ELLLKIIAETSDDETIQSYKQAI 104 (117)
T ss_dssp HHHHHHHHHHCCCHHHHHTHHHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHH
Confidence 99999999999998876544433
No 40
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.64 E-value=7e-15 Score=108.89 Aligned_cols=128 Identities=17% Similarity=0.166 Sum_probs=112.5
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHh
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATNGLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYL 147 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 147 (202)
..+..++..|..++..|+|++|+..|.+++.+ .+.+++++|.+|..+|++++|+..|++++.++|+++.+++++|.++.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~ 82 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQDP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYY 82 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSSSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 34667889999999999999999999999865 57899999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhcCCCCH----------------HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 148 KTSELEKDEADIKRALTIDPNNR----------------DVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 148 ~~~~~~~A~~~~~~a~~l~p~~~----------------~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
..|++++|+.+|++++.+.|.+. .+...+..+...+.+..+.. ..|.+.
T Consensus 83 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~-~~~~~a 147 (213)
T 1hh8_A 83 QTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAE-EQLALA 147 (213)
T ss_dssp HTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHH-HHHHHH
T ss_pred HcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHH-HHHHHH
Confidence 99999999999999999998877 88888888877766555433 244443
No 41
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.64 E-value=5e-15 Score=115.47 Aligned_cols=100 Identities=31% Similarity=0.440 Sum_probs=97.0
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHh
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYL 147 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 147 (202)
+..+...|+.++..|+|++|+..|.+++. |..+.+++++|.+|..+|++++|+.+++++++++|+++.+++++|.++.
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 83 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 56788999999999999999999999999 8899999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhcCCCC
Q 046569 148 KTSELEKDEADIKRALTIDPNN 169 (202)
Q Consensus 148 ~~~~~~~A~~~~~~a~~l~p~~ 169 (202)
.+|++++|+..|++++.++|++
T Consensus 84 ~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 84 EMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999976
No 42
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.63 E-value=2.1e-14 Score=104.07 Aligned_cols=101 Identities=15% Similarity=0.104 Sum_probs=89.2
Q ss_pred HHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhc
Q 046569 71 ERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLK 148 (202)
Q Consensus 71 ~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~ 148 (202)
..+...|..+...+++..|+..+.+++. |....++..+|.+|..+|++++|+..|+++++++|.++.+|+++|.+|..
T Consensus 74 ~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~ 153 (184)
T 3vtx_A 74 EAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEG 153 (184)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHH
Confidence 3445566666777777777777777766 88899999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCCCHH
Q 046569 149 TSELEKDEADIKRALTIDPNNRD 171 (202)
Q Consensus 149 ~~~~~~A~~~~~~a~~l~p~~~~ 171 (202)
+|++++|+.+|+++++++|+++.
T Consensus 154 ~g~~~~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 154 KGLRDEAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp TTCHHHHHHHHHHHHHTTHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCccCHH
Confidence 99999999999999999998653
No 43
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.63 E-value=6.6e-15 Score=101.36 Aligned_cols=98 Identities=16% Similarity=0.119 Sum_probs=90.5
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYME 178 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~ 178 (202)
|..+..+.++|.+|++.|+|++|+.+|+++++++|.++.+|+++|.++..+|++++|+.+|+++++++|++..+...+..
T Consensus 10 P~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~ 89 (126)
T 4gco_A 10 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAA 89 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 046569 179 LKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~ 197 (202)
+...+.+..+... .|.+.
T Consensus 90 ~~~~~~~~~~A~~-~~~~a 107 (126)
T 4gco_A 90 CLVAMREWSKAQR-AYEDA 107 (126)
T ss_dssp HHHHTTCHHHHHH-HHHHH
T ss_pred HHHHCCCHHHHHH-HHHHH
Confidence 9888877765433 55554
No 44
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.63 E-value=1.3e-14 Score=108.86 Aligned_cols=116 Identities=17% Similarity=0.149 Sum_probs=107.5
Q ss_pred HHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCCh-------HHHHH
Q 046569 71 ERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNV-------KALFR 141 (202)
Q Consensus 71 ~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-------~~~~~ 141 (202)
..+...|..++..|+|++|+..|.+++. |....++.++|.+|..+|++++|+..++++++++|+++ .+|+.
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 122 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLK 122 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 4566799999999999999999999999 89999999999999999999999999999999999998 77999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHHHHH
Q 046569 142 RSQAYLKTSELEKDEADIKRALTIDPN--NRDVKLVYMELKENQREY 186 (202)
Q Consensus 142 ~g~~~~~~~~~~~A~~~~~~a~~l~p~--~~~~~~~l~~~~~~~~~~ 186 (202)
+|.++...|++++|+..|+++++++|+ +..+...+..+.......
T Consensus 123 ~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 123 EGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 889998888886655443
No 45
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.63 E-value=1.1e-15 Score=108.80 Aligned_cols=104 Identities=10% Similarity=0.005 Sum_probs=93.4
Q ss_pred HHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCH
Q 046569 93 YEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNR 170 (202)
Q Consensus 93 y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~ 170 (202)
|.+++. |.++.+++++|.+++..|+|++|+..|++++.++|+++.+|+++|.++..+|++++|+.+|++++.++|+++
T Consensus 25 l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~ 104 (151)
T 3gyz_A 25 LKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDY 104 (151)
T ss_dssp TGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCC
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCc
Confidence 444444 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 171 DVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 171 ~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
.+...+..+...+.+..+... .|.+.
T Consensus 105 ~~~~~lg~~~~~lg~~~eA~~-~~~~a 130 (151)
T 3gyz_A 105 TPVFHTGQCQLRLKAPLKAKE-CFELV 130 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHH-HHHHH
Confidence 999999999888877664443 45444
No 46
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.61 E-value=2.2e-14 Score=103.54 Aligned_cols=115 Identities=11% Similarity=0.149 Sum_probs=104.4
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHH-HHHhcCH--HHHHHHHHHHhhhCCCChHHHHHHH
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAAC-KLKLEDY--SEASSLCTKVLELEPLNVKALFRRS 143 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~-~~~~~~~--~~A~~~~~~al~~~p~~~~~~~~~g 143 (202)
....+...|..++..|++++|+..|.+++. |.++.++.++|.+ +...|++ ++|+..+++++..+|+++.+++.+|
T Consensus 43 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 122 (177)
T 2e2e_A 43 NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLA 122 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 356788999999999999999999999999 8889999999999 8899999 9999999999999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 046569 144 QAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQ 183 (202)
Q Consensus 144 ~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 183 (202)
.++...|++++|+..|++++.++|++......+..+.+..
T Consensus 123 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~~~~ 162 (177)
T 2e2e_A 123 SDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESINMAK 162 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHH
Confidence 9999999999999999999999999876665555554433
No 47
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.60 E-value=2.5e-15 Score=125.53 Aligned_cols=116 Identities=24% Similarity=0.345 Sum_probs=108.7
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHH
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQA 145 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 145 (202)
..+..+...|..++..|+|++|+..|++|++ |....++.++|.+|..+|++++|+.+++++++++|+++.+++++|.+
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~ 83 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAAS 83 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3466777889999999999999999999999 88999999999999999999999999999999999999999999999
Q ss_pred HhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 046569 146 YLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQ 183 (202)
Q Consensus 146 ~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 183 (202)
|..+|++++|+..|+++++++|++..+...+..+....
T Consensus 84 ~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~ 121 (477)
T 1wao_1 84 NMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIV 121 (477)
T ss_dssp HHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988888875444
No 48
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.59 E-value=1.5e-14 Score=95.64 Aligned_cols=100 Identities=21% Similarity=0.199 Sum_probs=94.6
Q ss_pred HHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCC--ChHHHHHHHHHH
Q 046569 71 ERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPL--NVKALFRRSQAY 146 (202)
Q Consensus 71 ~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~~g~~~ 146 (202)
..+...|..++..|++++|+..|.+++. |....++.++|.++..+|++++|+.+++++++.+|. ++.+++.+|.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~ 86 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADAL 86 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHH
Confidence 3456789999999999999999999999 888899999999999999999999999999999999 999999999999
Q ss_pred hcC-CCHHHHHHHHHHHHhcCCCCH
Q 046569 147 LKT-SELEKDEADIKRALTIDPNNR 170 (202)
Q Consensus 147 ~~~-~~~~~A~~~~~~a~~l~p~~~ 170 (202)
... |++++|+.++++++...|.++
T Consensus 87 ~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 87 RYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp TTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHhCCHHHHHHHHHHHhhcccCCC
Confidence 999 999999999999999999763
No 49
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.59 E-value=1.2e-13 Score=108.91 Aligned_cols=115 Identities=25% Similarity=0.321 Sum_probs=106.1
Q ss_pred HHHHhHHHHHcCcHHHHHHHHHHHHH--hHH----HHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHH
Q 046569 73 KKHDGNLLFRAGKYWRASKKYEKATN--GLR----LSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAY 146 (202)
Q Consensus 73 ~~~~g~~~~~~~~~~~A~~~y~~al~--~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 146 (202)
....|..++..|++++|+..|.+++. |.. ..++..+|.++...|++++|+..++++++.+|+++.+++.+|.++
T Consensus 237 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (359)
T 3ieg_A 237 LIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAY 316 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 44668999999999999999999999 333 356788999999999999999999999999999999999999999
Q ss_pred hcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 046569 147 LKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYA 187 (202)
Q Consensus 147 ~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~ 187 (202)
...|++++|..+|+++++++|+++.+...+..+...+++.+
T Consensus 317 ~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~ 357 (359)
T 3ieg_A 317 LIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQSQ 357 (359)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999887654
No 50
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.58 E-value=4.4e-14 Score=106.72 Aligned_cols=110 Identities=25% Similarity=0.371 Sum_probs=79.3
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHH
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAY 146 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 146 (202)
.+..+...|..++..|++++|+..|.+++. |..+.++.++|.++..+|++++|+..++++++.+|+++.+++.+|.++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 217 (258)
T 3uq3_A 138 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQ 217 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 344556677777777777777777777776 666677777777777777777777777777777777777777777777
Q ss_pred hcCCCHHHHHHHHHHHHhcC------CCCHHHHHHHHH
Q 046569 147 LKTSELEKDEADIKRALTID------PNNRDVKLVYME 178 (202)
Q Consensus 147 ~~~~~~~~A~~~~~~a~~l~------p~~~~~~~~l~~ 178 (202)
...|++++|...|+++++++ |++..+...+..
T Consensus 218 ~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~ 255 (258)
T 3uq3_A 218 IAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYK 255 (258)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHH
Confidence 77777777777777777777 766666666554
No 51
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.58 E-value=1.3e-13 Score=93.60 Aligned_cols=125 Identities=24% Similarity=0.338 Sum_probs=110.5
Q ss_pred HHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcC
Q 046569 72 RKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKT 149 (202)
Q Consensus 72 ~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~ 149 (202)
.+...|..++..|++++|+..|.+++. |....++..+|.++...|++++|+..+.+++...|.++.+++.+|.++...
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQ 82 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHh
Confidence 467789999999999999999999998 778889999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 150 SELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 150 ~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
|++++|+..+++++...|.+..+...+..+.....+..+. ...+.++
T Consensus 83 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A-~~~~~~~ 129 (136)
T 2fo7_A 83 GDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEA-IEYYQKA 129 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHH-HHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHH-HHHHHHH
Confidence 9999999999999999999999888888877666554433 2344444
No 52
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.58 E-value=1.8e-13 Score=104.56 Aligned_cols=113 Identities=18% Similarity=0.071 Sum_probs=104.7
Q ss_pred HHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHH
Q 046569 67 IEACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQ 144 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 144 (202)
...+..+...|..++..|++++|+..|.+++. |..+.++.++|.+|...|++++|+.+++++++++|.++.+++.+|.
T Consensus 40 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~ 119 (275)
T 1xnf_A 40 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGI 119 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHH
Confidence 34577888999999999999999999999999 8889999999999999999999999999999999999999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 046569 145 AYLKTSELEKDEADIKRALTIDPNNRDVKLVYMEL 179 (202)
Q Consensus 145 ~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~ 179 (202)
++...|++++|+..|++++.++|++..........
T Consensus 120 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (275)
T 1xnf_A 120 ALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA 154 (275)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 99999999999999999999999998665555443
No 53
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.57 E-value=2.9e-13 Score=96.96 Aligned_cols=127 Identities=19% Similarity=0.173 Sum_probs=112.6
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHh
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYL 147 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 147 (202)
...+...|..++..|++++|+..|.+++. |....++.++|.++...|++++|+..+++++..+|.++.+++.+|.++.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 121 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALD 121 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHH
Confidence 45677889999999999999999999998 8889999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 148 KTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 148 ~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
..|++++|...+++++..+|.++.+...++.+.....+..+.. ..+.+.
T Consensus 122 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~-~~~~~~ 170 (186)
T 3as5_A 122 NLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEAL-PHFKKA 170 (186)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHH
T ss_pred HcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHH-HHHHHH
Confidence 9999999999999999999999999999988877765554332 244443
No 54
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.57 E-value=6.3e-14 Score=119.01 Aligned_cols=129 Identities=9% Similarity=0.028 Sum_probs=116.4
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHH
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQA 145 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 145 (202)
..+..+...|..++..|++++|+..|+++++ |....++.++|.+|..+|++++|+..++++++++|+++.+++++|.+
T Consensus 21 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~ 100 (568)
T 2vsy_A 21 QDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHA 100 (568)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 3466788999999999999999999999999 88999999999999999999999999999999999999999999999
Q ss_pred HhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHhh
Q 046569 146 YLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQ---REYAKYQAEIFGSM 197 (202)
Q Consensus 146 ~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~ 197 (202)
+...|++++|+..|+++++++|++..+...+..+...+ .+..+. ...|.+.
T Consensus 101 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A-~~~~~~a 154 (568)
T 2vsy_A 101 LEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVL-SAQVRAA 154 (568)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHH-HHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHH-HHHHHHH
Confidence 99999999999999999999999999999999988777 554433 2344443
No 55
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.56 E-value=5.4e-14 Score=107.70 Aligned_cols=107 Identities=16% Similarity=0.189 Sum_probs=98.3
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHH---HHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC---hHHHHH
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLR---LSCYLNNAACKLKLEDYSEASSLCTKVLELEPLN---VKALFR 141 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~ 141 (202)
+..++..|..++..|+|++|+..|.+++. |.. +.+++++|.+|+.+|+|++|+..|++++...|++ +.+++.
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~ 94 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYE 94 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHH
Confidence 67888999999999999999999999999 555 8999999999999999999999999999998854 678999
Q ss_pred HHHHHhc--------CCCHHHHHHHHHHHHhcCCCCHHHHHHH
Q 046569 142 RSQAYLK--------TSELEKDEADIKRALTIDPNNRDVKLVY 176 (202)
Q Consensus 142 ~g~~~~~--------~~~~~~A~~~~~~a~~l~p~~~~~~~~l 176 (202)
+|.++.. .|++++|+..|++++..+|+++.+...+
T Consensus 95 lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~ 137 (261)
T 3qky_A 95 RAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDAT 137 (261)
T ss_dssp HHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHH
T ss_pred HHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHH
Confidence 9999999 9999999999999999999987666443
No 56
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.55 E-value=5.4e-13 Score=100.68 Aligned_cols=119 Identities=18% Similarity=0.194 Sum_probs=109.0
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH----------------------------hHHHHHHHHHHHHHHHhcCHHHH
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN----------------------------GLRLSCYLNNAACKLKLEDYSEA 121 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~----------------------------~~~~~~~~~~a~~~~~~~~~~~A 121 (202)
+..+...|..+...|++++|+..|.+++. |..+.++.++|.++...|++++|
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 158 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNA 158 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHH
Confidence 56778889999999999999999888876 67788999999999999999999
Q ss_pred HHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 046569 122 SSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAK 188 (202)
Q Consensus 122 ~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~ 188 (202)
+..+++++..+|.++.+++.+|.++...|++++|+..|++++.++|+++.+...+..+...+.+..+
T Consensus 159 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~ 225 (258)
T 3uq3_A 159 VKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYAS 225 (258)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHH
Confidence 9999999999999999999999999999999999999999999999999999999888777765543
No 57
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.55 E-value=2.8e-13 Score=101.88 Aligned_cols=109 Identities=13% Similarity=0.134 Sum_probs=96.8
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--h---HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChH---HHHH
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--G---LRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVK---ALFR 141 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~---~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~ 141 (202)
+..++..|..++..|+|++|+..|++++. | ....+++++|.+|..+|+|++|+..|+++++.+|+++. +++.
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~ 83 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYM 83 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHH
Confidence 46788999999999999999999999998 3 44689999999999999999999999999999999865 8999
Q ss_pred HHHHHhc------------------CCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 046569 142 RSQAYLK------------------TSELEKDEADIKRALTIDPNNRDVKLVYME 178 (202)
Q Consensus 142 ~g~~~~~------------------~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~ 178 (202)
+|.++.. .|++++|+..|++++..+|+++.+...+..
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~ 138 (225)
T 2yhc_A 84 RGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKR 138 (225)
T ss_dssp HHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHH
T ss_pred HHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHH
Confidence 9999886 689999999999999999999765544433
No 58
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.55 E-value=3.7e-14 Score=100.25 Aligned_cols=99 Identities=9% Similarity=0.028 Sum_probs=91.3
Q ss_pred HHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCC
Q 046569 91 KKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPN 168 (202)
Q Consensus 91 ~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~ 168 (202)
..|.+++. |....+++++|.++...|+|++|+..|++++.++|+++.+|+.+|.++...|++++|+.+|++++.++|+
T Consensus 8 ~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~ 87 (148)
T 2vgx_A 8 GTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIX 87 (148)
T ss_dssp CSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred hhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 45777877 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHH
Q 046569 169 NRDVKLVYMELKENQREYAKY 189 (202)
Q Consensus 169 ~~~~~~~l~~~~~~~~~~~~~ 189 (202)
++.+...+..+...+.+..+.
T Consensus 88 ~~~~~~~lg~~~~~~g~~~~A 108 (148)
T 2vgx_A 88 EPRFPFHAAECLLQXGELAEA 108 (148)
T ss_dssp CTHHHHHHHHHHHHTTCHHHH
T ss_pred CchHHHHHHHHHHHcCCHHHH
Confidence 999999998887777665543
No 59
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.55 E-value=8.8e-14 Score=116.01 Aligned_cols=119 Identities=12% Similarity=0.028 Sum_probs=111.2
Q ss_pred HHHHHHhHHHHHc---------CcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHh--------cCHHHHHHHHHHHhhh
Q 046569 71 ERKKHDGNLLFRA---------GKYWRASKKYEKATN--GLRLSCYLNNAACKLKL--------EDYSEASSLCTKVLEL 131 (202)
Q Consensus 71 ~~~~~~g~~~~~~---------~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~--------~~~~~A~~~~~~al~~ 131 (202)
..+...|..+... |++++|+..|.++++ |....+++++|.+|..+ |++++|+.+|++++++
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 250 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV 250 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh
Confidence 5667888889998 999999999999999 99999999999999999 9999999999999999
Q ss_pred CC---CChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 046569 132 EP---LNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKY 189 (202)
Q Consensus 132 ~p---~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~ 189 (202)
+| .++.+|+++|.+|..+|++++|+..|++++.++|+++.+...+..+...+.+..+.
T Consensus 251 ~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eA 311 (474)
T 4abn_A 251 DRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSL 311 (474)
T ss_dssp CGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99 99999999999999999999999999999999999999999999888877765543
No 60
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.54 E-value=1.3e-13 Score=102.04 Aligned_cols=101 Identities=18% Similarity=0.147 Sum_probs=95.9
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCCh-----------
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNV----------- 136 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----------- 136 (202)
+..+...|..++..|++++|+..|.+++. |..+.+++++|.+|..+|++++|+.++++++++.|.+.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 116 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQF 116 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhcccc
Confidence 45788999999999999999999999999 88999999999999999999999999999999888877
Q ss_pred -----HHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCH
Q 046569 137 -----KALFRRSQAYLKTSELEKDEADIKRALTIDPNNR 170 (202)
Q Consensus 137 -----~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~ 170 (202)
.+++++|.++..+|++++|...|++++.++|++.
T Consensus 117 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 117 KLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp EEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred CccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 9999999999999999999999999999999763
No 61
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.54 E-value=4.7e-13 Score=102.44 Aligned_cols=114 Identities=13% Similarity=0.129 Sum_probs=103.3
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHH--------hcCHHHHHHHHHHHhhhCCCCh
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN-----GLRLSCYLNNAACKLK--------LEDYSEASSLCTKVLELEPLNV 136 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~-----~~~~~~~~~~a~~~~~--------~~~~~~A~~~~~~al~~~p~~~ 136 (202)
...+...|..++..|+|++|+..|.+++. +..+.+++++|.++.. +|++++|+..|+++++..|+++
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 56788999999999999999999999999 4678899999999999 9999999999999999999987
Q ss_pred HHH-----------------HHHHHHHhcCCCHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHH
Q 046569 137 KAL-----------------FRRSQAYLKTSELEKDEADIKRALTIDPNN---RDVKLVYMELKENQ 183 (202)
Q Consensus 137 ~~~-----------------~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~---~~~~~~l~~~~~~~ 183 (202)
.+. +.+|.+|...|++++|+..|++++...|++ +.+...+..+...+
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~ 198 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAY 198 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHh
Confidence 666 889999999999999999999999999985 56777777776655
No 62
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.54 E-value=1.6e-13 Score=114.50 Aligned_cols=113 Identities=13% Similarity=-0.003 Sum_probs=108.3
Q ss_pred HHHHHHHhHHHHHcCcH-HHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHH
Q 046569 70 CERKKHDGNLLFRAGKY-WRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAY 146 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~-~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 146 (202)
+..+...|..++..|+| ++|+..|.++++ |..+.+++++|.+|..+|++++|+.+|+++++++|+ ..+++.+|.++
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~ 180 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVL 180 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHH
Confidence 56778899999999999 999999999999 899999999999999999999999999999999998 79999999999
Q ss_pred hcC---------CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 046569 147 LKT---------SELEKDEADIKRALTIDPNNRDVKLVYMELKENQ 183 (202)
Q Consensus 147 ~~~---------~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 183 (202)
..+ |++++|+..|++++.++|++..+...+..+...+
T Consensus 181 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 226 (474)
T 4abn_A 181 RQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSL 226 (474)
T ss_dssp TTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 999 9999999999999999999999999999988777
No 63
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.53 E-value=2.6e-13 Score=97.21 Aligned_cols=120 Identities=16% Similarity=0.167 Sum_probs=110.9
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHH
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAY 146 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 146 (202)
.+..+...|..++..|++++|+..|.+++. |....++..+|.++...|++++|+..+++++..+|.++.+++.+|.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 86 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTY 86 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 356778899999999999999999999998 788999999999999999999999999999999999999999999999
Q ss_pred hcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 046569 147 LKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAK 188 (202)
Q Consensus 147 ~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~ 188 (202)
...|++++|...+++++..+|.+..+...+..+.....+..+
T Consensus 87 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 128 (186)
T 3as5_A 87 VQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDE 128 (186)
T ss_dssp HHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHH
Confidence 999999999999999999999999999888887766655443
No 64
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.52 E-value=4.8e-14 Score=122.53 Aligned_cols=125 Identities=13% Similarity=0.128 Sum_probs=110.6
Q ss_pred HHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhc
Q 046569 71 ERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLK 148 (202)
Q Consensus 71 ~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~ 148 (202)
..+...|..++..|+|++|+..|+++++ |.+..+++++|.+|..+|++++|+.+|+++++++|+++.+++++|.++..
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~ 513 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAEL 513 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 4667889999999999999999999998 88999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 149 TSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 149 ~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
+|++++ +..|+++++++|++..+...+..+...+.+..+.. ..|.+.
T Consensus 514 ~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~-~~~~~a 560 (681)
T 2pzi_A 514 AGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAV-RTLDEV 560 (681)
T ss_dssp HTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHTS
T ss_pred cCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHH-HHHHhh
Confidence 999999 99999999999999999999998887776665433 244443
No 65
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.52 E-value=9.3e-13 Score=98.72 Aligned_cols=118 Identities=18% Similarity=0.174 Sum_probs=101.1
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHh
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYL 147 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 147 (202)
...+...|..++..|++++|+..|.+++. |....++..+|.++..+|++++|+..++++++.+|.++.+++.+|.++.
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 136 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLV 136 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 56677888889999999999999999988 7788888899999999999999999999999999888888999999999
Q ss_pred cCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 046569 148 KTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYA 187 (202)
Q Consensus 148 ~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~ 187 (202)
..|++++|+..+++++.++|.+..+...+..+.....+..
T Consensus 137 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 176 (243)
T 2q7f_A 137 KLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLD 176 (243)
T ss_dssp HTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCH
T ss_pred HhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHH
Confidence 9999999999999999999888888888877766655443
No 66
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.51 E-value=1.2e-12 Score=96.79 Aligned_cols=116 Identities=14% Similarity=0.007 Sum_probs=67.8
Q ss_pred HHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHhh--hCCCChHHHHHHHHHH
Q 046569 72 RKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKL-EDYSEASSLCTKVLE--LEPLNVKALFRRSQAY 146 (202)
Q Consensus 72 ~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~--~~p~~~~~~~~~g~~~ 146 (202)
.+...|..+...|++++|+..|.+++. |....++.++|.++... |++++|+..+++++. ..|.++.+++.+|.++
T Consensus 44 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~ 123 (225)
T 2vq2_A 44 AWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICS 123 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHH
Confidence 344455555555666666666666555 55555666666666666 666666666666665 3444455666666666
Q ss_pred hcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 046569 147 LKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYA 187 (202)
Q Consensus 147 ~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~ 187 (202)
...|++++|+..|++++..+|.+..+...+..+.....+..
T Consensus 124 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 164 (225)
T 2vq2_A 124 AKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLG 164 (225)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHH
Confidence 66666666666666666666666665555555555444433
No 67
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.51 E-value=2.2e-13 Score=108.43 Aligned_cols=118 Identities=13% Similarity=0.085 Sum_probs=106.8
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHh
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYL 147 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 147 (202)
+..+...|..+...|++++|+..|.+++. |..+.++.++|.++..+|++++|+..++++++++|+++.+++.+|.++.
T Consensus 217 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 296 (368)
T 1fch_A 217 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCI 296 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 45677889999999999999999999998 8888999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhcCCCC-----------HHHHHHHHHHHHHHHHHH
Q 046569 148 KTSELEKDEADIKRALTIDPNN-----------RDVKLVYMELKENQREYA 187 (202)
Q Consensus 148 ~~~~~~~A~~~~~~a~~l~p~~-----------~~~~~~l~~~~~~~~~~~ 187 (202)
..|++++|...|++++.++|++ ..+...+..+...+.+..
T Consensus 297 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 347 (368)
T 1fch_A 297 NLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSD 347 (368)
T ss_dssp HHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGG
T ss_pred HCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChH
Confidence 9999999999999999999988 788888888877775544
No 68
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.51 E-value=7.1e-13 Score=104.48 Aligned_cols=110 Identities=23% Similarity=0.296 Sum_probs=104.1
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHh
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYL 147 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 147 (202)
+..+...|..++..|+|++|+..|.+++. |..+.++.++|.++..+|++++|+..+++++.++|+++.+++.+|.++.
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 82 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLL 82 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHH
Confidence 56788999999999999999999999999 8899999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhcCC---CCHHHHHHHHHH
Q 046569 148 KTSELEKDEADIKRALTIDP---NNRDVKLVYMEL 179 (202)
Q Consensus 148 ~~~~~~~A~~~~~~a~~l~p---~~~~~~~~l~~~ 179 (202)
..|++++|+..|++++.++| +++.+...+..+
T Consensus 83 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~ 117 (359)
T 3ieg_A 83 KQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKA 117 (359)
T ss_dssp HHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHH
Confidence 99999999999999999999 888887777543
No 69
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.51 E-value=4e-13 Score=108.17 Aligned_cols=118 Identities=15% Similarity=0.116 Sum_probs=83.3
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHh
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYL 147 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 147 (202)
...+...|..++..|++++|+..|.++++ |..+.++.++|.++...|++++|+..++++++++|+++.++..+|.++.
T Consensus 237 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 316 (388)
T 1w3b_A 237 AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKR 316 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHH
Confidence 34455667777777777777777777776 6666777777777777777777777777777777777777777777777
Q ss_pred cCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 046569 148 KTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYA 187 (202)
Q Consensus 148 ~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~ 187 (202)
..|++++|+..|++++.++|++..+...+..+.....+..
T Consensus 317 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~ 356 (388)
T 1w3b_A 317 EQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ 356 (388)
T ss_dssp TTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCH
T ss_pred HcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHH
Confidence 7777777777777777777777777776666655544433
No 70
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.51 E-value=2.7e-13 Score=98.06 Aligned_cols=126 Identities=15% Similarity=0.141 Sum_probs=85.2
Q ss_pred HHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHH-------------------------------
Q 046569 74 KHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSE------------------------------- 120 (202)
Q Consensus 74 ~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~------------------------------- 120 (202)
...|..+...|++++|+..|.+++. |.++.++.++|.++...|++++
T Consensus 10 ~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~ 89 (176)
T 2r5s_A 10 LKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAA 89 (176)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcc
Confidence 3444455555555555555555554 4455555555555555555444
Q ss_pred ---HHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046569 121 ---ASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNN--RDVKLVYMELKENQREYAKYQAEIFG 195 (202)
Q Consensus 121 ---A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~--~~~~~~l~~~~~~~~~~~~~~~~~~~ 195 (202)
|+..++++++++|+++.+++.+|.++...|++++|+..|++++.++|+. +.++..+..+...+....+ ....|+
T Consensus 90 ~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~-A~~~y~ 168 (176)
T 2r5s_A 90 ESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNA-IASKYR 168 (176)
T ss_dssp SCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCH-HHHHHH
T ss_pred cchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCc-HHHHHH
Confidence 4555666667788999999999999999999999999999999999875 5688888888777655443 333566
Q ss_pred hhhhc
Q 046569 196 SMLSK 200 (202)
Q Consensus 196 ~~f~~ 200 (202)
+.+..
T Consensus 169 ~al~~ 173 (176)
T 2r5s_A 169 RQLYS 173 (176)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 71
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.50 E-value=2.2e-13 Score=108.75 Aligned_cols=112 Identities=13% Similarity=0.033 Sum_probs=96.1
Q ss_pred HhHHHHHcCcHHHHHHHHHHHHH--hH--HHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCC
Q 046569 76 DGNLLFRAGKYWRASKKYEKATN--GL--RLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSE 151 (202)
Q Consensus 76 ~g~~~~~~~~~~~A~~~y~~al~--~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~ 151 (202)
.|..+...|++++|+..|.+++. |. .+.++.++|.+|...|++++|+..++++++++|+++.+|+.+|.++...|+
T Consensus 183 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 262 (365)
T 4eqf_A 183 MSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDR 262 (365)
T ss_dssp ------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 37788888999999999999998 66 788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 046569 152 LEKDEADIKRALTIDPNNRDVKLVYMELKENQREYA 187 (202)
Q Consensus 152 ~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~ 187 (202)
+++|+..|++++.++|++..+...+..+...+.+..
T Consensus 263 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~ 298 (365)
T 4eqf_A 263 SEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYR 298 (365)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCH
T ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHH
Confidence 999999999999999999999998888877765544
No 72
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.50 E-value=4.4e-13 Score=107.96 Aligned_cols=117 Identities=20% Similarity=0.108 Sum_probs=90.6
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHH
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAY 146 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 146 (202)
.+..+...|..+...|++++|+..|.+++. |....++.++|.++...|++++|+..+.++++.+|+++.++..+|.++
T Consensus 66 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 145 (388)
T 1w3b_A 66 LAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLL 145 (388)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 345677788888888888888888888887 777777888888888888888888888888888887777777788888
Q ss_pred hcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 046569 147 LKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQRE 185 (202)
Q Consensus 147 ~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~ 185 (202)
...|++++|...|++++..+|++..+...+..+.....+
T Consensus 146 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 184 (388)
T 1w3b_A 146 KALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGE 184 (388)
T ss_dssp HTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC
T ss_pred HHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 888888888888888887777777777777666544433
No 73
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.50 E-value=5.1e-13 Score=91.04 Aligned_cols=91 Identities=18% Similarity=0.192 Sum_probs=84.6
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYME 178 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~ 178 (202)
|..+..+.++|.+++..|+|++|+..|+++++++|+++.+|+++|.++..+|++++|+.+|++++.++|+++.+...+..
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 046569 179 LKENQREYAKY 189 (202)
Q Consensus 179 ~~~~~~~~~~~ 189 (202)
+...+.+..+.
T Consensus 81 ~~~~~~~~~~A 91 (126)
T 3upv_A 81 AQIAVKEYASA 91 (126)
T ss_dssp HHHHTTCHHHH
T ss_pred HHHHHhCHHHH
Confidence 88777665543
No 74
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.50 E-value=3.4e-13 Score=105.29 Aligned_cols=128 Identities=11% Similarity=0.014 Sum_probs=109.3
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHH-------------------
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTK------------------- 127 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~------------------- 127 (202)
....+...|..+...|++++|+..|.+++. |.++.++.++|.++...|++++|+..+++
T Consensus 116 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l 195 (287)
T 3qou_A 116 EEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIEL 195 (287)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHH
Confidence 345678999999999999999999999999 99999999999999999999987655554
Q ss_pred ---------------HhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHHHHHHHHH
Q 046569 128 ---------------VLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNN--RDVKLVYMELKENQREYAKYQ 190 (202)
Q Consensus 128 ---------------al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~--~~~~~~l~~~~~~~~~~~~~~ 190 (202)
++..+|+++.+++.+|.++...|++++|+..|++++..+|++ ..++..+..+...+.+.....
T Consensus 196 ~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~ 275 (287)
T 3qou_A 196 LXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALA 275 (287)
T ss_dssp HHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHH
T ss_pred HhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHH
Confidence 466689999999999999999999999999999999999998 889999998888775544322
Q ss_pred HHHHHhh
Q 046569 191 AEIFGSM 197 (202)
Q Consensus 191 ~~~~~~~ 197 (202)
..|++.
T Consensus 276 -~~~r~a 281 (287)
T 3qou_A 276 -SXYRRQ 281 (287)
T ss_dssp -HHHHHH
T ss_pred -HHHHHH
Confidence 344444
No 75
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.50 E-value=6e-13 Score=99.77 Aligned_cols=118 Identities=16% Similarity=0.106 Sum_probs=106.0
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHh
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYL 147 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 147 (202)
...+...|..+...|++++|+..|.+++. |....++..+|.++...|++++|+..+++++..+|+++.+++.+|.++.
T Consensus 91 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 170 (243)
T 2q7f_A 91 ATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLA 170 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 44556788999999999999999999998 7788899999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 046569 148 KTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYA 187 (202)
Q Consensus 148 ~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~ 187 (202)
..|++++|+..|++++..+|+++.+...+..+........
T Consensus 171 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 210 (243)
T 2q7f_A 171 NEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENRE 210 (243)
T ss_dssp HHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTT
T ss_pred HcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHH
Confidence 9999999999999999999999999888888876665544
No 76
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.50 E-value=2e-13 Score=104.30 Aligned_cols=106 Identities=8% Similarity=-0.001 Sum_probs=71.4
Q ss_pred HHHHHhHHHHHcCcHHHHHHHHHHHHH-h----HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHH
Q 046569 72 RKKHDGNLLFRAGKYWRASKKYEKATN-G----LRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAY 146 (202)
Q Consensus 72 ~~~~~g~~~~~~~~~~~A~~~y~~al~-~----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 146 (202)
.+...|..++..|++++|+..|.+++. + ....++.++|.++..+|++++|+.+++++++++|.++.++..+|.++
T Consensus 39 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~ 118 (272)
T 3u4t_A 39 IYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYF 118 (272)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 445566666666667777766666666 1 22344667777777777777777777777777777777777777777
Q ss_pred hcCCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 046569 147 LKTSELEKDEADIKRALTIDPNNRDVKLVYM 177 (202)
Q Consensus 147 ~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~ 177 (202)
...|++++|+..|++++.++|.++.+...+.
T Consensus 119 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~ 149 (272)
T 3u4t_A 119 YNKGNFPLAIQYMEKQIRPTTTDPKVFYELG 149 (272)
T ss_dssp HHTTCHHHHHHHHGGGCCSSCCCHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 7777777777777777777777766666666
No 77
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.50 E-value=2.4e-13 Score=95.00 Aligned_cols=98 Identities=7% Similarity=0.008 Sum_probs=88.0
Q ss_pred HHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCC
Q 046569 92 KYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNN 169 (202)
Q Consensus 92 ~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~ 169 (202)
.|.+++. |....+++++|.+++..|+|++|+..|++++..+|+++.+|+.+|.++...|++++|+.+|++++.++|++
T Consensus 6 ~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 85 (142)
T 2xcb_A 6 TLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINE 85 (142)
T ss_dssp ---CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC
Confidence 4556666 88999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 046569 170 RDVKLVYMELKENQREYAKY 189 (202)
Q Consensus 170 ~~~~~~l~~~~~~~~~~~~~ 189 (202)
+.+...+..+...+.+..+.
T Consensus 86 ~~~~~~lg~~~~~~g~~~~A 105 (142)
T 2xcb_A 86 PRFPFHAAECHLQLGDLDGA 105 (142)
T ss_dssp THHHHHHHHHHHHTTCHHHH
T ss_pred cHHHHHHHHHHHHcCCHHHH
Confidence 99999998887777665543
No 78
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.49 E-value=2.7e-13 Score=108.18 Aligned_cols=118 Identities=14% Similarity=0.133 Sum_probs=106.9
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHh
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYL 147 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 147 (202)
+..+...|..+...|++++|+..|.+++. |..+.++.++|.+|...|++++|+..|+++++++|+++.+++.+|.++.
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 292 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCI 292 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 45677899999999999999999999999 8889999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhcCCCC------------HHHHHHHHHHHHHHHHHH
Q 046569 148 KTSELEKDEADIKRALTIDPNN------------RDVKLVYMELKENQREYA 187 (202)
Q Consensus 148 ~~~~~~~A~~~~~~a~~l~p~~------------~~~~~~l~~~~~~~~~~~ 187 (202)
..|++++|+..|++++.++|++ ..+...+..+...+.+..
T Consensus 293 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 344 (365)
T 4eqf_A 293 NLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPE 344 (365)
T ss_dssp HHTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCHH
T ss_pred HCCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcHH
Confidence 9999999999999999999884 456667777666665544
No 79
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.49 E-value=5.5e-13 Score=89.58 Aligned_cols=99 Identities=8% Similarity=0.024 Sum_probs=87.9
Q ss_pred HHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhc
Q 046569 88 RASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTI 165 (202)
Q Consensus 88 ~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l 165 (202)
.|+..|.+++. |..+.+++++|.+|...|++++|+..|++++.++|+++.+|+.+|.++...|++++|+..|++++.+
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAA 82 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 57889999998 8889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC--CHHHHHHHHHHHHHHHHH
Q 046569 166 DPN--NRDVKLVYMELKENQREY 186 (202)
Q Consensus 166 ~p~--~~~~~~~l~~~~~~~~~~ 186 (202)
+|. +......+......+.+.
T Consensus 83 ~~~~~~~~~~~~l~~~l~~l~~~ 105 (115)
T 2kat_A 83 AQSRGDQQVVKELQVFLRRLARE 105 (115)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHhccc
Confidence 884 456666665555555443
No 80
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.49 E-value=2.7e-14 Score=124.09 Aligned_cols=111 Identities=13% Similarity=0.010 Sum_probs=105.4
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHH
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAY 146 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 146 (202)
.+..+...|..++..|+|++|+..|+++++ |.+..+++++|.++..+|++++ +.+|+++++++|+++.+|+++|.++
T Consensus 466 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~ 544 (681)
T 2pzi_A 466 RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARAR 544 (681)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHH
Confidence 345667899999999999999999999999 9999999999999999999999 9999999999999999999999999
Q ss_pred hcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 046569 147 LKTSELEKDEADIKRALTIDPNNRDVKLVYMELK 180 (202)
Q Consensus 147 ~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 180 (202)
..+|++++|+.+|+++++++|++..+...+..+.
T Consensus 545 ~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~ 578 (681)
T 2pzi_A 545 SAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTL 578 (681)
T ss_dssp HHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHH
Confidence 9999999999999999999999999998888875
No 81
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.49 E-value=1.6e-12 Score=98.23 Aligned_cols=112 Identities=14% Similarity=0.107 Sum_probs=59.9
Q ss_pred HHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh--hCCCChHHHHHHHHHHh
Q 046569 72 RKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLE--LEPLNVKALFRRSQAYL 147 (202)
Q Consensus 72 ~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~~g~~~~ 147 (202)
.+...|..++..|++++|+..|.+++. |....++.++|.++...|++++|+..+++++. ..|.++.+++.+|.++.
T Consensus 73 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~ 152 (252)
T 2ho1_A 73 AHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSL 152 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHH
Confidence 334455555555555555555555555 44455555555555555555555555555555 44445555555555555
Q ss_pred cCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 046569 148 KTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQ 183 (202)
Q Consensus 148 ~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 183 (202)
..|++++|+..|++++.++|.+..+...+..+....
T Consensus 153 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 188 (252)
T 2ho1_A 153 QMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKE 188 (252)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHc
Confidence 555555555555555555555555555554444443
No 82
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.49 E-value=8.6e-13 Score=100.79 Aligned_cols=115 Identities=19% Similarity=0.217 Sum_probs=104.8
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHh
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYL 147 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 147 (202)
+..+...|..+...|++++|+..|.++++ |..+.++.++|.+|..+|++++|+..++++++++|.++.+++.+|...+
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 153 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYY 153 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 44578899999999999999999999999 8889999999999999999999999999999999999999999994445
Q ss_pred cCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 046569 148 KTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQR 184 (202)
Q Consensus 148 ~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~ 184 (202)
..+++++|+..|+++++++|++..+...+..+...+.
T Consensus 154 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~ 190 (272)
T 3u4t_A 154 YNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQD 190 (272)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcC
Confidence 5569999999999999999999988888887766654
No 83
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.48 E-value=5.4e-14 Score=101.48 Aligned_cols=121 Identities=15% Similarity=0.107 Sum_probs=102.8
Q ss_pred HhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHH-HhcCCCH
Q 046569 76 DGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQA-YLKTSEL 152 (202)
Q Consensus 76 ~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~-~~~~~~~ 152 (202)
.+..++..|++++|+..|.+++. |..+.++..+|.+|...|++++|+..|.+++.++|+++.+++.+|.+ +...|++
T Consensus 16 ~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~ 95 (177)
T 2e2e_A 16 PLHQFASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQH 95 (177)
T ss_dssp TTCCCC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTC
T ss_pred hhhhhhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCc
Confidence 34446678999999999999999 88999999999999999999999999999999999999999999999 8899999
Q ss_pred --HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 153 --EKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 153 --~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
++|+..|++++.++|+++.+...+..+........+... .|.+.
T Consensus 96 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~-~~~~a 141 (177)
T 2e2e_A 96 MTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIE-LWQKV 141 (177)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH-HHHHH
T ss_pred chHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHH-HHHHH
Confidence 999999999999999999999999988877766554333 45444
No 84
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.48 E-value=2.4e-12 Score=95.09 Aligned_cols=113 Identities=15% Similarity=0.130 Sum_probs=74.5
Q ss_pred HHHHHHhHHHHHc-CcHHHHHHHHHHHHH----hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHH
Q 046569 71 ERKKHDGNLLFRA-GKYWRASKKYEKATN----GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQA 145 (202)
Q Consensus 71 ~~~~~~g~~~~~~-~~~~~A~~~y~~al~----~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 145 (202)
..+...|..++.. |++++|+..|.+++. |....++.++|.++...|++++|+..+.++++.+|.++.+++.+|.+
T Consensus 77 ~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 156 (225)
T 2vq2_A 77 EINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELART 156 (225)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHH
Confidence 3445566666666 777777777776665 44556666777777777777777777777777777666677777777
Q ss_pred HhcCCCHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHH
Q 046569 146 YLKTSELEKDEADIKRALTIDP-NNRDVKLVYMELKENQ 183 (202)
Q Consensus 146 ~~~~~~~~~A~~~~~~a~~l~p-~~~~~~~~l~~~~~~~ 183 (202)
+...|++++|...+++++.++| .+......+..+....
T Consensus 157 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (225)
T 2vq2_A 157 KMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKAL 195 (225)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 7777777777777777777766 6666655555554443
No 85
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.48 E-value=1e-12 Score=108.77 Aligned_cols=104 Identities=29% Similarity=0.295 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHH
Q 046569 66 KIEACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRS 143 (202)
Q Consensus 66 ~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 143 (202)
+.+.+..+...|+.++..|+|.+|+..|++++. | ++.++.++|.++..+|++++|+.+++++++++|+++.+++.+|
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 80 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKE-DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRA 80 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc-cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 356788999999999999999999999999999 6 5889999999999999999999999999999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHhcCCCCH
Q 046569 144 QAYLKTSELEKDEADIKRALTIDPNNR 170 (202)
Q Consensus 144 ~~~~~~~~~~~A~~~~~~a~~l~p~~~ 170 (202)
.++..+|++++|+..|++++.++|.+.
T Consensus 81 ~~~~~~g~~~~A~~~~~~~~~~~~~~~ 107 (514)
T 2gw1_A 81 SANEGLGKFADAMFDLSVLSLNGDFND 107 (514)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHSSSCCG
T ss_pred HHHHHHhhHHHHHHHHHHHHhcCCCcc
Confidence 999999999999999999999999764
No 86
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.48 E-value=2.3e-12 Score=105.23 Aligned_cols=113 Identities=22% Similarity=0.293 Sum_probs=105.7
Q ss_pred HHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHH
Q 046569 67 IEACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQ 144 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 144 (202)
+..+..+...|..++..|+|++|+..|.+++. |..+.++.++|.+|..+|++++|+..++++++.+|+++.+++.+|.
T Consensus 23 p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 102 (450)
T 2y4t_A 23 MADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGH 102 (450)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 45578889999999999999999999999999 8889999999999999999999999999999999999999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHhcCCCCH---HHHHHHHHH
Q 046569 145 AYLKTSELEKDEADIKRALTIDPNNR---DVKLVYMEL 179 (202)
Q Consensus 145 ~~~~~~~~~~A~~~~~~a~~l~p~~~---~~~~~l~~~ 179 (202)
++...|++++|+..|++++.++|++. .+...+..+
T Consensus 103 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~ 140 (450)
T 2y4t_A 103 LLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKS 140 (450)
T ss_dssp HHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHH
Confidence 99999999999999999999999998 776666444
No 87
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.48 E-value=1.6e-14 Score=95.93 Aligned_cols=90 Identities=24% Similarity=0.381 Sum_probs=54.2
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC------hHHHHH
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLN------VKALFR 141 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~ 141 (202)
+..+...|..++..|+|++|+..|.+++. |..+.++.++|.++..+|++++|+.+++++++++|++ ..++++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 83 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYR 83 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 34455566666666666666666666665 5556666666666666666666666666666666665 556666
Q ss_pred HHHHHhcCCCHHHHHHHH
Q 046569 142 RSQAYLKTSELEKDEADI 159 (202)
Q Consensus 142 ~g~~~~~~~~~~~A~~~~ 159 (202)
+|.++..+|+++.|+..+
T Consensus 84 ~~~~~~~~~~~~~a~~~~ 101 (111)
T 2l6j_A 84 LELAQGAVGSVQIPVVEV 101 (111)
T ss_dssp HHHHHHHHHCCCCCSSSS
T ss_pred HHHHHHHHHhHhhhHhHH
Confidence 666666665555554443
No 88
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.48 E-value=1.1e-12 Score=99.23 Aligned_cols=119 Identities=14% Similarity=-0.005 Sum_probs=110.4
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHH
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAY 146 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 146 (202)
.+..+...|..++..|++++|+..|.+++. |....++..+|.++...|++++|+..+.++++.+|.++.+++.+|.++
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 115 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFL 115 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHH
Confidence 377889999999999999999999999999 888999999999999999999999999999999999999999999999
Q ss_pred hcCCCHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH
Q 046569 147 LKTSELEKDEADIKRALT--IDPNNRDVKLVYMELKENQREYA 187 (202)
Q Consensus 147 ~~~~~~~~A~~~~~~a~~--l~p~~~~~~~~l~~~~~~~~~~~ 187 (202)
...|++++|+..|++++. ..|.+..+...+..+.....+..
T Consensus 116 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 158 (252)
T 2ho1_A 116 YEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPA 158 (252)
T ss_dssp HHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHH
T ss_pred HHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHH
Confidence 999999999999999999 88888888888888776665544
No 89
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.48 E-value=3.2e-12 Score=104.38 Aligned_cols=113 Identities=26% Similarity=0.330 Sum_probs=104.2
Q ss_pred HHHHhHHHHHcCcHHHHHHHHHHHHH--hHH----HHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHH
Q 046569 73 KKHDGNLLFRAGKYWRASKKYEKATN--GLR----LSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAY 146 (202)
Q Consensus 73 ~~~~g~~~~~~~~~~~A~~~y~~al~--~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 146 (202)
....|..++..|++++|+..|.+++. |.. ..++.++|.++..+|++++|+..+++++.++|+++.+|+.+|.++
T Consensus 260 ~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 339 (450)
T 2y4t_A 260 LIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAY 339 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 34569999999999999999999999 443 558999999999999999999999999999999999999999999
Q ss_pred hcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 046569 147 LKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQRE 185 (202)
Q Consensus 147 ~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~ 185 (202)
...|++++|...|+++++++|+++.+...+..+...+++
T Consensus 340 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 378 (450)
T 2y4t_A 340 LIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQ 378 (450)
T ss_dssp HHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999988776654
No 90
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.47 E-value=2.7e-13 Score=93.27 Aligned_cols=72 Identities=15% Similarity=0.223 Sum_probs=68.2
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCH
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNR 170 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~ 170 (202)
++.+.++.++|.++++.|+|++|+.+|+++++++|+++.+|+++|.+|..+|++++|+.+|+++++++|++.
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~ 76 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR 76 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc
Confidence 356778999999999999999999999999999999999999999999999999999999999999998774
No 91
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.47 E-value=1.3e-12 Score=101.85 Aligned_cols=120 Identities=14% Similarity=0.130 Sum_probs=110.5
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHh
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYL 147 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 147 (202)
...+...|..+...|++++|+..|.+++. |....++.++|.++...|++++|+..++++++.+|+++.+++.+|.++.
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 251 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYS 251 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 45667889999999999999999999999 8889999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhcCCC------------CHHHHHHHHHHHHHHHHHHHH
Q 046569 148 KTSELEKDEADIKRALTIDPN------------NRDVKLVYMELKENQREYAKY 189 (202)
Q Consensus 148 ~~~~~~~A~~~~~~a~~l~p~------------~~~~~~~l~~~~~~~~~~~~~ 189 (202)
..|++++|...|++++.++|. +..+...+..+...+.+..+.
T Consensus 252 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 305 (327)
T 3cv0_A 252 NMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLV 305 (327)
T ss_dssp HTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHH
Confidence 999999999999999999999 788888888888777665533
No 92
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.47 E-value=1.8e-12 Score=101.16 Aligned_cols=120 Identities=15% Similarity=0.008 Sum_probs=106.4
Q ss_pred HHHHHHHhHHHHHcC-cHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHH
Q 046569 70 CERKKHDGNLLFRAG-KYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAY 146 (202)
Q Consensus 70 a~~~~~~g~~~~~~~-~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 146 (202)
...+...|..++..| ++++|+..|.+++. |..+.++..+|.++...|++++|+..+++++...|++..+++.+|.++
T Consensus 90 ~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~ 169 (330)
T 3hym_B 90 PVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEY 169 (330)
T ss_dssp THHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 345678889999999 99999999999998 888889999999999999999999999999999999999999999999
Q ss_pred hcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 046569 147 LKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKY 189 (202)
Q Consensus 147 ~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~ 189 (202)
...|++++|+..|++++..+|.++.+...+..+.....+..+.
T Consensus 170 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A 212 (330)
T 3hym_B 170 GLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTA 212 (330)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHH
Confidence 9999999999999999999999999988888887766555433
No 93
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.46 E-value=1.4e-12 Score=99.50 Aligned_cols=116 Identities=9% Similarity=-0.060 Sum_probs=103.5
Q ss_pred HHcCcHHHHHHHHHHHHH------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHH
Q 046569 81 FRAGKYWRASKKYEKATN------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEK 154 (202)
Q Consensus 81 ~~~~~~~~A~~~y~~al~------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~ 154 (202)
...++|++|+..|.++++ |..+.++..+|.++...|++++|+..+++++.++|+++.+++.+|.++...|++++
T Consensus 16 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~ 95 (275)
T 1xnf_A 16 QPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDA 95 (275)
T ss_dssp CCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHH
T ss_pred CccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHH
Confidence 345889999999999998 67899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 155 DEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 155 A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
|+.+|++++.++|.+..+...+..+.....+..+.. ..|.++
T Consensus 96 A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~a 137 (275)
T 1xnf_A 96 AYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQ-DDLLAF 137 (275)
T ss_dssp HHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHH-HHHHHH
T ss_pred HHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHH-HHHHHH
Confidence 999999999999999999999998887766555332 244444
No 94
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.46 E-value=2.7e-12 Score=86.90 Aligned_cols=100 Identities=28% Similarity=0.418 Sum_probs=93.8
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHh
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYL 147 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 147 (202)
...+...|..++..|++++|+..|.+++. |....++.++|.++...|++++|+..+.+++...|.++.+++.+|.++.
T Consensus 35 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 114 (136)
T 2fo7_A 35 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY 114 (136)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 34566789999999999999999999998 7788899999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhcCCCC
Q 046569 148 KTSELEKDEADIKRALTIDPNN 169 (202)
Q Consensus 148 ~~~~~~~A~~~~~~a~~l~p~~ 169 (202)
..|++++|...|++++.++|++
T Consensus 115 ~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 115 KQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHccHHHHHHHHHHHHccCCCC
Confidence 9999999999999999999864
No 95
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.46 E-value=2.4e-12 Score=100.54 Aligned_cols=115 Identities=10% Similarity=-0.041 Sum_probs=80.0
Q ss_pred HHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhC---------CCChHHHHH
Q 046569 73 KKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELE---------PLNVKALFR 141 (202)
Q Consensus 73 ~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~---------p~~~~~~~~ 141 (202)
+...|..+...|++++|+..|.+++. |..+.++.++|.++...|++++|+..+++++... |.++.+++.
T Consensus 162 ~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 241 (330)
T 3hym_B 162 MLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNN 241 (330)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHH
Confidence 34466666667777777777777766 6666777777777777777777777777777664 555667777
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 046569 142 RSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYA 187 (202)
Q Consensus 142 ~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~ 187 (202)
+|.++...|++++|+..|++++.++|++..+...+..+...+.+..
T Consensus 242 la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~ 287 (330)
T 3hym_B 242 LGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFE 287 (330)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccHH
Confidence 7777777777777777777777777777777777776666655544
No 96
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.45 E-value=5.5e-13 Score=111.22 Aligned_cols=113 Identities=24% Similarity=0.319 Sum_probs=99.5
Q ss_pred cCCCHHHHHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCCh
Q 046569 59 WKMDTHEKIEACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNV 136 (202)
Q Consensus 59 ~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 136 (202)
..++..+....+..+...|..++..|+|++|+..|++++. |.++.++.++|.+|..+|++++|+..|++++.++|+++
T Consensus 14 ~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 93 (537)
T 3fp2_A 14 KGLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHS 93 (537)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred cCCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchH
Confidence 4457788888999999999999999999999999999999 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHH
Q 046569 137 KALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDV 172 (202)
Q Consensus 137 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~ 172 (202)
.+++.+|.++...|++++|+..|+ ++.++|+....
T Consensus 94 ~~~~~la~~~~~~g~~~~A~~~~~-~~~~~~~~~~~ 128 (537)
T 3fp2_A 94 KALLRRASANESLGNFTDAMFDLS-VLSLNGDFDGA 128 (537)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHH-HHC--------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHH-HHhcCCCCChH
Confidence 999999999999999999999996 88888876543
No 97
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.45 E-value=2.7e-12 Score=81.93 Aligned_cols=84 Identities=30% Similarity=0.430 Sum_probs=75.5
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYME 178 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~ 178 (202)
+....+++++|.++...|++++|+..+.+++..+|+++.+++.+|.++...|++++|+..|++++.++|+++.+...+..
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 35677899999999999999999999999999999999999999999999999999999999999999999988888877
Q ss_pred HHHH
Q 046569 179 LKEN 182 (202)
Q Consensus 179 ~~~~ 182 (202)
+...
T Consensus 86 ~~~~ 89 (91)
T 1na3_A 86 AKQK 89 (91)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6543
No 98
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.44 E-value=4.4e-12 Score=86.42 Aligned_cols=94 Identities=16% Similarity=0.105 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 046569 103 SCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKEN 182 (202)
Q Consensus 103 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 182 (202)
..++.+|.+++..|++++|+..++++++.+|+++.+|+.+|.++...|++++|+..|++++.++|+++.+...+..+...
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHhh
Q 046569 183 QREYAKYQAEIFGSM 197 (202)
Q Consensus 183 ~~~~~~~~~~~~~~~ 197 (202)
..+..+... .|.+.
T Consensus 98 ~g~~~~A~~-~~~~a 111 (121)
T 1hxi_A 98 EHNANAALA-SLRAW 111 (121)
T ss_dssp HHHHHHHHH-HHHHH
T ss_pred cCCHHHHHH-HHHHH
Confidence 877765443 55544
No 99
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.44 E-value=3.6e-12 Score=99.76 Aligned_cols=112 Identities=13% Similarity=0.093 Sum_probs=56.0
Q ss_pred HHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHH--HHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHh
Q 046569 72 RKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNA--ACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYL 147 (202)
Q Consensus 72 ~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a--~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 147 (202)
.+...|..+.+.|++++|+..|.+++. |.........+ .++...|++++|+..|++++..+|+++.+++.+|.++.
T Consensus 132 ~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~ 211 (291)
T 3mkr_A 132 CMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHM 211 (291)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 344455555555666666666655555 32221111111 11112245555555555555555555555555555555
Q ss_pred cCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 046569 148 KTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQ 183 (202)
Q Consensus 148 ~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 183 (202)
.+|++++|...|++++.++|+++.+..++..+....
T Consensus 212 ~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~ 247 (291)
T 3mkr_A 212 AQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHL 247 (291)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 555555555555555555555555555555444433
No 100
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.44 E-value=3.2e-12 Score=97.42 Aligned_cols=130 Identities=22% Similarity=0.194 Sum_probs=110.9
Q ss_pred HHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH----------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh-----
Q 046569 67 IEACERKKHDGNLLFRAGKYWRASKKYEKATN----------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLEL----- 131 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~----------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~----- 131 (202)
...+..+...|..++..|++++|+..|.+++. +....++.++|.+|...|++++|+..+.+++.+
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 119 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVL 119 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHc
Confidence 34577788999999999999999999999996 567789999999999999999999999999988
Q ss_pred ---CCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 132 ---EPLNVKALFRRSQAYLKTSELEKDEADIKRALTI--------DPNNRDVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 132 ---~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l--------~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
+|....+++.+|.++...|++++|+..|++++.+ .|....+...+..+.....+..+.. ..+.+.
T Consensus 120 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~~ 195 (283)
T 3edt_B 120 GKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAE-TLYKEI 195 (283)
T ss_dssp CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHH-HHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHH-HHHHHH
Confidence 4667889999999999999999999999999999 6666778888888877766555333 244443
No 101
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.43 E-value=5.5e-12 Score=94.72 Aligned_cols=127 Identities=8% Similarity=-0.020 Sum_probs=104.9
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hH---HHHHHHHHHHHHHH------------------hcCHHHHHHHHH
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GL---RLSCYLNNAACKLK------------------LEDYSEASSLCT 126 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~---~~~~~~~~a~~~~~------------------~~~~~~A~~~~~ 126 (202)
...+...|..++..|+|++|+..|.++++ |. ...+++.+|.++.. .|++++|+..|+
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 120 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFS 120 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHH
Confidence 35678899999999999999999999999 43 34589999999987 579999999999
Q ss_pred HHhhhCCCChHHH-----------------HHHHHHHhcCCCHHHHHHHHHHHHhcCCCCH---HHHHHHHHHHHHHHHH
Q 046569 127 KVLELEPLNVKAL-----------------FRRSQAYLKTSELEKDEADIKRALTIDPNNR---DVKLVYMELKENQREY 186 (202)
Q Consensus 127 ~al~~~p~~~~~~-----------------~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~---~~~~~l~~~~~~~~~~ 186 (202)
++++..|+++.++ +.+|.+|...|++++|+..|+++++..|+++ .+...+..+...+...
T Consensus 121 ~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~ 200 (225)
T 2yhc_A 121 KLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMN 200 (225)
T ss_dssp HHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCc
Confidence 9999999987655 6789999999999999999999999999987 5566666666666555
Q ss_pred HHHHHHHHHhh
Q 046569 187 AKYQAEIFGSM 197 (202)
Q Consensus 187 ~~~~~~~~~~~ 197 (202)
.+. .+.++++
T Consensus 201 ~~A-~~~~~~l 210 (225)
T 2yhc_A 201 AQA-EKVAKII 210 (225)
T ss_dssp HHH-HHHHHHH
T ss_pred HHH-HHHHHHH
Confidence 543 2344443
No 102
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.43 E-value=4.9e-12 Score=98.78 Aligned_cols=104 Identities=13% Similarity=0.009 Sum_probs=91.6
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHhhhCCCC---
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN--------GLRLSCYLNNAACKLKL-EDYSEASSLCTKVLELEPLN--- 135 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~~~p~~--- 135 (202)
..+..+.+.|..+...|++++|+..|.+|+. .....++.++|.+|... |++++|+.+|++++++.|..
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~ 154 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV 154 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCCh
Confidence 3467888999999999999999999999998 23467899999999995 99999999999999998754
Q ss_pred ---hHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHH
Q 046569 136 ---VKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRD 171 (202)
Q Consensus 136 ---~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~ 171 (202)
..++.++|.++..+|++++|+.+|++++.+.|++..
T Consensus 155 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 155 ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 467889999999999999999999999999988753
No 103
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.43 E-value=2.9e-12 Score=91.36 Aligned_cols=98 Identities=19% Similarity=0.215 Sum_probs=88.1
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYME 178 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~ 178 (202)
+..+..+..+|.+++..|+|++|+..|+++++++|+++.+|+++|.+|..+|++++|+.+|++++.++|++..+...+..
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 87 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGL 87 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 046569 179 LKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~ 197 (202)
+...+.+..+... .|.+.
T Consensus 88 ~~~~~g~~~~A~~-~~~~a 105 (164)
T 3sz7_A 88 ARFDMADYKGAKE-AYEKG 105 (164)
T ss_dssp HHHHTTCHHHHHH-HHHHH
T ss_pred HHHHccCHHHHHH-HHHHH
Confidence 9888776654433 44443
No 104
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.43 E-value=3.9e-12 Score=101.11 Aligned_cols=120 Identities=14% Similarity=0.061 Sum_probs=106.6
Q ss_pred HhHHHHHcCcHHHHHHHHHHHHH--hH--HHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCC
Q 046569 76 DGNLLFRAGKYWRASKKYEKATN--GL--RLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSE 151 (202)
Q Consensus 76 ~g~~~~~~~~~~~A~~~y~~al~--~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~ 151 (202)
.|..+ ..|++++|+..|.+++. |. .+.++.++|.+|...|++++|+..+++++.++|+++.+++.+|.++...|+
T Consensus 188 ~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~ 266 (368)
T 1fch_A 188 LGSLL-SDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQ 266 (368)
T ss_dssp THHHH-HHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHh-hcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCC
Confidence 44444 88999999999999999 77 789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 152 LEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 152 ~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
+++|+..|++++.++|++..+...+..+.....+..+... .|.++
T Consensus 267 ~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~-~~~~a 311 (368)
T 1fch_A 267 SEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVE-HFLEA 311 (368)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHH-HHHHH
Confidence 9999999999999999999999999998877766554332 44443
No 105
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.43 E-value=3.5e-12 Score=84.36 Aligned_cols=83 Identities=12% Similarity=0.109 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCC------HHHHH
Q 046569 101 RLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNN------RDVKL 174 (202)
Q Consensus 101 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~------~~~~~ 174 (202)
.+.++.++|.+++..|+|++|+..|+++++++|+++.+++++|.++..+|++++|+.+|++++.++|++ ..+..
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999999999998 66666
Q ss_pred HHHHHHHHH
Q 046569 175 VYMELKENQ 183 (202)
Q Consensus 175 ~l~~~~~~~ 183 (202)
.+..+...+
T Consensus 83 ~~~~~~~~~ 91 (111)
T 2l6j_A 83 RLELAQGAV 91 (111)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666655544
No 106
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.42 E-value=2.5e-12 Score=100.63 Aligned_cols=95 Identities=11% Similarity=0.078 Sum_probs=89.2
Q ss_pred HcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHH-HHHH
Q 046569 82 RAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEK-DEAD 158 (202)
Q Consensus 82 ~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~-A~~~ 158 (202)
..|++++|+..|++++. |..+.+++++|.++..+|++++|+..++++++++|+++.+++++|.++...|++++ +..+
T Consensus 178 ~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~ 257 (291)
T 3mkr_A 178 GGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRY 257 (291)
T ss_dssp CTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 45899999999999999 89999999999999999999999999999999999999999999999999999987 5689
Q ss_pred HHHHHhcCCCCHHHHHHH
Q 046569 159 IKRALTIDPNNRDVKLVY 176 (202)
Q Consensus 159 ~~~a~~l~p~~~~~~~~l 176 (202)
+++++.++|+++.+....
T Consensus 258 ~~~~~~~~P~~~~~~d~~ 275 (291)
T 3mkr_A 258 LSQLKDAHRSHPFIKEYR 275 (291)
T ss_dssp HHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHhCCCChHHHHHH
Confidence 999999999999887653
No 107
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.42 E-value=4.4e-12 Score=104.39 Aligned_cols=114 Identities=16% Similarity=0.020 Sum_probs=98.2
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH-----------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhC------
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN-----------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELE------ 132 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~-----------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~------ 132 (202)
+..+...|.+++..|+|++|+..|++|++ +.....|.|+|.+|..+|++++|+.++++++++.
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~ 130 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSP 130 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccc
Confidence 45677899999999999999999999987 4556789999999999999999999999999873
Q ss_pred --CCChHHHHHHHHHHhc--CCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 046569 133 --PLNVKALFRRSQAYLK--TSELEKDEADIKRALTIDPNNRDVKLVYMELKENQ 183 (202)
Q Consensus 133 --p~~~~~~~~~g~~~~~--~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 183 (202)
+..+.++..+|.++.. .++|++|+.+|++++.++|+++.+...+..+...+
T Consensus 131 ~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l 185 (472)
T 4g1t_A 131 YRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRL 185 (472)
T ss_dssp SCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 3567889988877765 45799999999999999999999988887765444
No 108
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.41 E-value=3.4e-12 Score=99.68 Aligned_cols=105 Identities=21% Similarity=0.257 Sum_probs=87.7
Q ss_pred HHHHHHHHhHHHHHc-CcHHHHHHHHHHHHH--hH------HHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChH--
Q 046569 69 ACERKKHDGNLLFRA-GKYWRASKKYEKATN--GL------RLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVK-- 137 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~-~~~~~A~~~y~~al~--~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~-- 137 (202)
.+..+...|..+... |++++|+..|++|+. |. ...++.++|.+|..+|+|++|+.+|++++++.|++..
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 195 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQ 195 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTG
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCccc
Confidence 356778899999996 999999999999998 32 3678999999999999999999999999999987643
Q ss_pred -----HHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHH
Q 046569 138 -----ALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVK 173 (202)
Q Consensus 138 -----~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~ 173 (202)
+++++|.++..+|++++|+.+|++++.++|+.....
T Consensus 196 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~ 236 (292)
T 1qqe_A 196 WSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSR 236 (292)
T ss_dssp GGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC--------
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCcH
Confidence 689999999999999999999999999999876543
No 109
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.40 E-value=4.5e-12 Score=105.68 Aligned_cols=111 Identities=18% Similarity=0.189 Sum_probs=68.0
Q ss_pred hHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHH
Q 046569 77 GNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEK 154 (202)
Q Consensus 77 g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~ 154 (202)
|..++..|++++|+..|.+++. |..+.++.++|.++...|++++|+..+++++..+|+++.+++.+|.++...|++++
T Consensus 283 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~ 362 (537)
T 3fp2_A 283 ALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTE 362 (537)
T ss_dssp HHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHH
Confidence 3333333444444444444443 55566666666666666777777777777766666666666667777777777777
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 046569 155 DEADIKRALTIDPNNRDVKLVYMELKENQREYA 187 (202)
Q Consensus 155 A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~ 187 (202)
|+..|++++.++|+++.+...+..+.....+..
T Consensus 363 A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 395 (537)
T 3fp2_A 363 SEAFFNETKLKFPTLPEVPTFFAEILTDRGDFD 395 (537)
T ss_dssp HHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHH
Confidence 777777777777666666666666655544433
No 110
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.39 E-value=3.1e-12 Score=84.11 Aligned_cols=82 Identities=13% Similarity=0.116 Sum_probs=72.0
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCC--CHHHHHHH
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPN--NRDVKLVY 176 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~--~~~~~~~l 176 (202)
|.++.+++++|.+|..+|++++|+..|+++++++|+++.+|+.+|.+|..+|++++|+..|++++.+.|. +......+
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l 83 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSEL 83 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHH
Confidence 5678899999999999999999999999999999999999999999999999999999999999999874 44444444
Q ss_pred HHHH
Q 046569 177 MELK 180 (202)
Q Consensus 177 ~~~~ 180 (202)
..+.
T Consensus 84 ~~~l 87 (100)
T 3ma5_A 84 QDAK 87 (100)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 111
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.38 E-value=7.8e-12 Score=103.46 Aligned_cols=113 Identities=15% Similarity=0.169 Sum_probs=97.9
Q ss_pred HHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHH------HHHHHHHHHHHH---hcCHHHHHHHHHHHhhhCCCChHHH
Q 046569 71 ERKKHDGNLLFRAGKYWRASKKYEKATN--GLRL------SCYLNNAACKLK---LEDYSEASSLCTKVLELEPLNVKAL 139 (202)
Q Consensus 71 ~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~------~~~~~~a~~~~~---~~~~~~A~~~~~~al~~~p~~~~~~ 139 (202)
..+...|..++..|++++|+..|.+++. |... .++.++|.++.. .|++++|+..+++++..+|+++.++
T Consensus 373 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 452 (514)
T 2gw1_A 373 EVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAK 452 (514)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHH
Confidence 4556788889999999999999999988 5443 389999999999 9999999999999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 046569 140 FRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQ 183 (202)
Q Consensus 140 ~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 183 (202)
+.+|.++...|++++|...|++++.++|+++.+...+.......
T Consensus 453 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 496 (514)
T 2gw1_A 453 IGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEAAK 496 (514)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988888776554443
No 112
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.37 E-value=7.8e-12 Score=97.47 Aligned_cols=107 Identities=12% Similarity=0.084 Sum_probs=98.1
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHh
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYL 147 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 147 (202)
+..+...|..++..|++++|+..|.+++. |....++..+|.++...|++++|+..++++++.+|+++.+++.+|.++.
T Consensus 21 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 100 (327)
T 3cv0_A 21 HENPMEEGLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHT 100 (327)
T ss_dssp SSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHH
Confidence 45677899999999999999999999999 8899999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhcCCCCHHHHHHH
Q 046569 148 KTSELEKDEADIKRALTIDPNNRDVKLVY 176 (202)
Q Consensus 148 ~~~~~~~A~~~~~~a~~l~p~~~~~~~~l 176 (202)
..|++++|+..|++++..+|.+......+
T Consensus 101 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 129 (327)
T 3cv0_A 101 NEHNANAALASLRAWLLSQPQYEQLGSVN 129 (327)
T ss_dssp HTTCHHHHHHHHHHHHHTSTTTTTC----
T ss_pred HcCCHHHHHHHHHHHHHhCCccHHHHHHH
Confidence 99999999999999999999986655444
No 113
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.37 E-value=4.3e-12 Score=107.68 Aligned_cols=114 Identities=13% Similarity=0.107 Sum_probs=88.0
Q ss_pred cCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHH
Q 046569 83 AGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIK 160 (202)
Q Consensus 83 ~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~ 160 (202)
.|++++|+..|+++++ |....++.++|.++...|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 81 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQ 81 (568)
T ss_dssp -------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 4789999999999998 88899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 161 RALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 161 ~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
+++.++|++..+...++.+.....+..+.. ..|.+.
T Consensus 82 ~al~~~p~~~~~~~~la~~~~~~g~~~~A~-~~~~~a 117 (568)
T 2vsy_A 82 QASDAAPEHPGIALWLGHALEDAGQAEAAA-AAYTRA 117 (568)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHH
T ss_pred HHHhcCCCCHHHHHHHHHHHHHcCCHHHHH-HHHHHH
Confidence 999999999999999999887776665443 244443
No 114
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.36 E-value=1.1e-11 Score=85.08 Aligned_cols=91 Identities=19% Similarity=0.218 Sum_probs=84.1
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYME 178 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~ 178 (202)
+..+..+..+|.+++..|+|++|+..|.+++.++|+++.+++.+|.++..+|++++|+.+|++++.++|+++.+...+..
T Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 85 (137)
T 3q49_B 6 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 85 (137)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHH
Confidence 44678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 046569 179 LKENQREYAKY 189 (202)
Q Consensus 179 ~~~~~~~~~~~ 189 (202)
+...+....+.
T Consensus 86 ~~~~~~~~~~A 96 (137)
T 3q49_B 86 CQLEMESYDEA 96 (137)
T ss_dssp HHHHTTCHHHH
T ss_pred HHHHHhhHHHH
Confidence 88777665533
No 115
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.36 E-value=1.8e-11 Score=102.48 Aligned_cols=130 Identities=17% Similarity=0.161 Sum_probs=105.7
Q ss_pred HHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH----------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh-----
Q 046569 67 IEACERKKHDGNLLFRAGKYWRASKKYEKATN----------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLEL----- 131 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~----------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~----- 131 (202)
...+....+.+..+..+|+|++|+..|.++++ |.....+.|+|.+|..+|+|++|+..+.+++.+
T Consensus 306 l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~l 385 (490)
T 3n71_A 306 IQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLY 385 (490)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHc
Confidence 44566667788888899999999999999998 778889999999999999999999999999976
Q ss_pred CCCC---hHHHHHHHHHHhcCCCHHHHHHHHHHHHhc-----CCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHhh
Q 046569 132 EPLN---VKALFRRSQAYLKTSELEKDEADIKRALTI-----DPNNRDVKL---VYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 132 ~p~~---~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l-----~p~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
.|++ ...+.++|.+|..+|++++|...|++|+.+ -|+++.+.. .+..+...++++++.|. .|+++
T Consensus 386 G~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~-~~~~~ 461 (490)
T 3n71_A 386 HHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEF-MYHKM 461 (490)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 4555 557999999999999999999999999975 577765555 45555555566665555 44443
No 116
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.36 E-value=8.7e-12 Score=88.74 Aligned_cols=95 Identities=14% Similarity=0.133 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCC-------ChH-----HHHHHHHHHhcCCCHHHHHHHHHHHHhc---
Q 046569 101 RLSCYLNNAACKLKLEDYSEASSLCTKVLELEPL-------NVK-----ALFRRSQAYLKTSELEKDEADIKRALTI--- 165 (202)
Q Consensus 101 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-------~~~-----~~~~~g~~~~~~~~~~~A~~~~~~a~~l--- 165 (202)
....+.++|..++..|+|++|+..|+++++++|+ +.. +|+++|.++..+|+|++|+.+|.+++++
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 4567899999999999999999999999999999 444 9999999999999999999999999999
Q ss_pred ----CCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHh
Q 046569 166 ----DPNNRDVK----LVYMELKENQREYAKYQAEIFGS 196 (202)
Q Consensus 166 ----~p~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~ 196 (202)
+|++..++ ..+..+...+.+..+.-. .|++
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~-~y~k 127 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMP-EFKK 127 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHH
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHH-HHHH
Confidence 99999999 888888887776664433 4443
No 117
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.36 E-value=1.3e-12 Score=85.19 Aligned_cols=67 Identities=18% Similarity=0.306 Sum_probs=34.6
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhhhCCCChH-HHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHH
Q 046569 107 NNAACKLKLEDYSEASSLCTKVLELEPLNVK-ALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVK 173 (202)
Q Consensus 107 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~ 173 (202)
++|.++...|++++|+..|+++++.+|+++. +++.+|.++..+|++++|+..|++++.++|++..+.
T Consensus 5 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 5 KTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 4445555555555555555555555555554 555555555555555555555555555555554443
No 118
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.36 E-value=2.2e-11 Score=102.98 Aligned_cols=106 Identities=16% Similarity=0.117 Sum_probs=59.1
Q ss_pred HHHHhHHHHHcCcHHHHHHHHHHHHH--------hH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHH
Q 046569 73 KKHDGNLLFRAGKYWRASKKYEKATN--------GL-RLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRS 143 (202)
Q Consensus 73 ~~~~g~~~~~~~~~~~A~~~y~~al~--------~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 143 (202)
+...|..+.+.|++++|+..|.++++ |. ...++..+|.+|...|++++|+..++++++++|+++.+|..+|
T Consensus 478 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~ 557 (597)
T 2xpi_A 478 LNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIA 557 (597)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 44455555555555555555555554 11 1445555555555555555555555555555555555555555
Q ss_pred HHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 046569 144 QAYLKTSELEKDEADIKRALTIDPNNRDVKLVYME 178 (202)
Q Consensus 144 ~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~ 178 (202)
.+|...|++++|...|+++++++|+++.+...+..
T Consensus 558 ~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~ 592 (597)
T 2xpi_A 558 LVYLHKKIPGLAITHLHESLAISPNEIMASDLLKR 592 (597)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Confidence 55555555555555555555555555555555443
No 119
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.35 E-value=2.7e-11 Score=102.41 Aligned_cols=127 Identities=9% Similarity=-0.054 Sum_probs=111.4
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHh
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYL 147 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 147 (202)
...+...|..+.+.|++++|+..|.+++. |....+|..++.+|...|++++|+..|++++...|+++.++..+|.++.
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 452 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHM 452 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 45667789999999999999999999998 8888999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 148 KTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 148 ~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
..|++++|...|++++.++|.++.+...+..+.....+..+... .|.++
T Consensus 453 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~-~~~~~ 501 (597)
T 2xpi_A 453 QLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAIN-HFQNA 501 (597)
T ss_dssp HHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHH-HHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHH-HHHHH
Confidence 99999999999999999999999998888888776655543332 44444
No 120
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.35 E-value=2.6e-11 Score=97.68 Aligned_cols=121 Identities=17% Similarity=0.111 Sum_probs=96.2
Q ss_pred HHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH---------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC--
Q 046569 67 IEACERKKHDGNLLFRAGKYWRASKKYEKATN---------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLN-- 135 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~---------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-- 135 (202)
...+..+...|..++..|++++|+..|.+|++ +....++.++|.+|..+|++++|+.++.+++.+.+..
T Consensus 140 ~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 219 (383)
T 3ulq_A 140 IEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ 219 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC
Confidence 34567788888888899999999999999887 3456688899999999999999999999998875533
Q ss_pred ----hHHHHHHHHHHhcCCCHHHHHHHHHHHHh-----cC-CCCHHHHHHHHHHHHHHHHHH
Q 046569 136 ----VKALFRRSQAYLKTSELEKDEADIKRALT-----ID-PNNRDVKLVYMELKENQREYA 187 (202)
Q Consensus 136 ----~~~~~~~g~~~~~~~~~~~A~~~~~~a~~-----l~-p~~~~~~~~l~~~~~~~~~~~ 187 (202)
..+++++|.+|..+|++++|+.+|++++. .+ |....+...++.+...+.+..
T Consensus 220 ~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 281 (383)
T 3ulq_A 220 PQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKID 281 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHH
Confidence 25788899999999999999999999988 45 666777777777766554443
No 121
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.33 E-value=2.1e-11 Score=77.66 Aligned_cols=82 Identities=29% Similarity=0.328 Sum_probs=76.9
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHH
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAY 146 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 146 (202)
.+..+...|..++..|++++|+..|.+++. |....++.++|.++..+|++++|+..+.++++++|+++.++..+|.++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 87 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 87 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 466788999999999999999999999999 888999999999999999999999999999999999999999999998
Q ss_pred hcCC
Q 046569 147 LKTS 150 (202)
Q Consensus 147 ~~~~ 150 (202)
...|
T Consensus 88 ~~~g 91 (91)
T 1na3_A 88 QKQG 91 (91)
T ss_dssp HHHC
T ss_pred HhcC
Confidence 7654
No 122
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.33 E-value=1.9e-11 Score=93.11 Aligned_cols=99 Identities=20% Similarity=0.119 Sum_probs=91.5
Q ss_pred HHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH----------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh-----
Q 046569 67 IEACERKKHDGNLLFRAGKYWRASKKYEKATN----------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLEL----- 131 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~----------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~----- 131 (202)
...+..+...|..+...|++++|+..|.+++. |....++.++|.+|..+|++++|+..+++++.+
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 161 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRL 161 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc
Confidence 34567788999999999999999999999997 567889999999999999999999999999998
Q ss_pred ---CCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhc
Q 046569 132 ---EPLNVKALFRRSQAYLKTSELEKDEADIKRALTI 165 (202)
Q Consensus 132 ---~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l 165 (202)
.|....++..+|.++..+|++++|+..|++++.+
T Consensus 162 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 162 GPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 6777889999999999999999999999999987
No 123
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.33 E-value=5.3e-11 Score=83.00 Aligned_cols=121 Identities=15% Similarity=0.071 Sum_probs=99.2
Q ss_pred HHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC---
Q 046569 67 IEACERKKHDGNLLFRAGKYWRASKKYEKATN--------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLN--- 135 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--- 135 (202)
...+..+...|..++..|++++|+..|.+++. .....++.++|.++..+|++++|+..+++++.+.+..
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 85 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 85 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Confidence 44577889999999999999999999999998 3334689999999999999999999999999876543
Q ss_pred ---hHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHHHHHH
Q 046569 136 ---VKALFRRSQAYLKTSELEKDEADIKRALTIDPNN------RDVKLVYMELKENQREYA 187 (202)
Q Consensus 136 ---~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~~~~~~ 187 (202)
..+++.+|.++...|++++|...+++++.+.+.. ..+...+..+.....+..
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 146 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHD 146 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHH
Confidence 6689999999999999999999999999885322 345555565555554443
No 124
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.31 E-value=1.2e-10 Score=89.42 Aligned_cols=107 Identities=14% Similarity=0.098 Sum_probs=57.8
Q ss_pred HHHHHHhHHHHHcCcHHHHHHHHHHHHHhHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHhhhCCCChHHHHHHHHHH
Q 046569 71 ERKKHDGNLLFRAGKYWRASKKYEKATNGLRLSCYLNNAACKLK----LEDYSEASSLCTKVLELEPLNVKALFRRSQAY 146 (202)
Q Consensus 71 ~~~~~~g~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 146 (202)
..+...|..++..+++++|+..|.+++++..+.+++++|.+|.. .+++++|+.+|+++++.+ ++.+++.+|.+|
T Consensus 7 ~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~ 84 (273)
T 1ouv_A 7 KELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLY 84 (273)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHH
Confidence 34445555555555555555555555554445555555555555 555555555555555553 455555555555
Q ss_pred hc----CCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 046569 147 LK----TSELEKDEADIKRALTIDPNNRDVKLVYMELKE 181 (202)
Q Consensus 147 ~~----~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 181 (202)
.. .+++++|+..|++++.++ ++.+...+..+..
T Consensus 85 ~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~ 121 (273)
T 1ouv_A 85 YSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYH 121 (273)
T ss_dssp HHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH
T ss_pred hCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHH
Confidence 55 555555555555555542 4444444444443
No 125
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.30 E-value=2.3e-11 Score=95.55 Aligned_cols=100 Identities=12% Similarity=0.074 Sum_probs=86.1
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--h------HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC-----
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN--G------LRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLN----- 135 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----- 135 (202)
.+..+...|..+.. |++++|+..|++|+. + ....++.++|.+|..+|+|++|+.+|++++.+.|.+
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 193 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPT 193 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhH
Confidence 45677788888888 999999999999998 2 346789999999999999999999999999986643
Q ss_pred -hHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCH
Q 046569 136 -VKALFRRSQAYLKTSELEKDEADIKRALTIDPNNR 170 (202)
Q Consensus 136 -~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~ 170 (202)
..+++.+|.++..+|++++|+.+|++++ ++|...
T Consensus 194 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 194 CYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 3478889999999999999999999999 999764
No 126
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.30 E-value=3.2e-11 Score=93.95 Aligned_cols=96 Identities=16% Similarity=0.121 Sum_probs=61.9
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH---------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC-----
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN---------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLN----- 135 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~---------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----- 135 (202)
+..+...|..++..|+|++|+..|.++++ +....+++|+|.+|..+|+|++|+.++++++++.+..
T Consensus 155 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~ 234 (293)
T 3u3w_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMAL 234 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHH
Confidence 33456666666667777777777777664 4445566677777777777777777777666654322
Q ss_pred -hHHHHHHHHHHhcCC-CHHHHHHHHHHHHhc
Q 046569 136 -VKALFRRSQAYLKTS-ELEKDEADIKRALTI 165 (202)
Q Consensus 136 -~~~~~~~g~~~~~~~-~~~~A~~~~~~a~~l 165 (202)
+.+++++|.++..+| ++++|+.+|++|+.+
T Consensus 235 ~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i 266 (293)
T 3u3w_A 235 IGQLYYQRGECLRKLEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 556666777777776 356677777666655
No 127
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.29 E-value=5.7e-11 Score=91.89 Aligned_cols=130 Identities=22% Similarity=0.189 Sum_probs=108.8
Q ss_pred HHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH----------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhC----
Q 046569 67 IEACERKKHDGNLLFRAGKYWRASKKYEKATN----------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELE---- 132 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~----------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~---- 132 (202)
...+..+...|..++..|++++|+..|.+++. +....++.++|.+|..+|++++|+..+.+++.+.
T Consensus 66 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (311)
T 3nf1_A 66 PDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVL 145 (311)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhc
Confidence 34456778899999999999999999999997 5667889999999999999999999999999874
Q ss_pred ----CCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 133 ----PLNVKALFRRSQAYLKTSELEKDEADIKRALTI--------DPNNRDVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 133 ----p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l--------~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
|....++..+|.++...|++++|+..|++++.+ .|....+...++.+.....+..+... .|.++
T Consensus 146 ~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~-~~~~a 221 (311)
T 3nf1_A 146 GKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAET-LYKEI 221 (311)
T ss_dssp CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHH-HHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHH-HHHHH
Confidence 556788999999999999999999999999998 66667777888877776665554332 44443
No 128
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.29 E-value=3.7e-11 Score=95.86 Aligned_cols=98 Identities=13% Similarity=0.028 Sum_probs=90.6
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHH
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQA 145 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 145 (202)
..+..+...|..+++.|+|++|+..|.+++. |.++.+++++|.+|..+|++++|+.+|+++++++|+++.++..+|.+
T Consensus 194 ~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 273 (336)
T 1p5q_A 194 LRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVC 273 (336)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 3467888999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HhcCCCHHHH-HHHHHHHHhc
Q 046569 146 YLKTSELEKD-EADIKRALTI 165 (202)
Q Consensus 146 ~~~~~~~~~A-~~~~~~a~~l 165 (202)
+..+|++++| ...|++.+..
T Consensus 274 ~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 274 QQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 5566666543
No 129
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.29 E-value=9.7e-12 Score=81.81 Aligned_cols=98 Identities=13% Similarity=0.130 Sum_probs=85.8
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCC--CHHHHHHH
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPN--NRDVKLVY 176 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~--~~~~~~~l 176 (202)
|....++..+|.++...|++++|+..++++++++|.++.+++.+|.++...|++++|+.+|++++.++|. +..+...+
T Consensus 3 p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l 82 (112)
T 2kck_A 3 DQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAK 82 (112)
T ss_dssp CSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHH
Confidence 3456788999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHHH-HHHHHHHHHHHHhh
Q 046569 177 MELKENQ-REYAKYQAEIFGSM 197 (202)
Q Consensus 177 ~~~~~~~-~~~~~~~~~~~~~~ 197 (202)
..+...+ .+..+. .+.+.++
T Consensus 83 ~~~~~~~~~~~~~A-~~~~~~~ 103 (112)
T 2kck_A 83 ADALRYIEGKEVEA-EIAEARA 103 (112)
T ss_dssp HHHHTTCSSCSHHH-HHHHHHH
T ss_pred HHHHHHHhCCHHHH-HHHHHHH
Confidence 9888776 655433 2344443
No 130
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.29 E-value=3.2e-11 Score=93.95 Aligned_cols=128 Identities=13% Similarity=0.043 Sum_probs=101.4
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh-------CCC
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLEL-------EPL 134 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-------~p~ 134 (202)
+..+...|..+...+++++|+..|.+++. .....++.++|.+|..+|+|++|+.+|+++++. .+.
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 194 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhH
Confidence 33445688888888999999999999998 233568999999999999999999999999953 123
Q ss_pred ChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 135 NVKALFRRSQAYLKTSELEKDEADIKRALTIDPNN------RDVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 135 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
...+++++|.+|..+|++++|+..+++++.+.+.. ..+...+..+...+.+..++....|++.
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~A 263 (293)
T 3u3w_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKA 263 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHH
Confidence 35689999999999999999999999999987654 6778888888777763322333344443
No 131
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.29 E-value=5.6e-11 Score=80.60 Aligned_cols=98 Identities=16% Similarity=0.183 Sum_probs=86.9
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYME 178 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~ 178 (202)
+.....+..+|.++...|++++|+..+++++..+|.++.+++.+|.++...|++++|+..|++++.++|.+..+...+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 92 (133)
T 2lni_A 13 PDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAA 92 (133)
T ss_dssp SCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 046569 179 LKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~ 197 (202)
+...+.+..+.. ..|.+.
T Consensus 93 ~~~~~~~~~~A~-~~~~~~ 110 (133)
T 2lni_A 93 ALEAMKDYTKAM-DVYQKA 110 (133)
T ss_dssp HHHHTTCHHHHH-HHHHHH
T ss_pred HHHHHhhHHHHH-HHHHHH
Confidence 887776555433 244443
No 132
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.28 E-value=1.4e-10 Score=90.28 Aligned_cols=120 Identities=13% Similarity=-0.003 Sum_probs=96.2
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh---hhCCCCh--
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--------GLRLSCYLNNAACKLKLEDYSEASSLCTKVL---ELEPLNV-- 136 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al---~~~p~~~-- 136 (202)
+..+...|..+...|++++|+..|.+++. .....+++++|.+|..+|+|++|+.++++++ +..|++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~ 194 (293)
T 2qfc_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccc
Confidence 33455677888888999999999999986 2346789999999999999999999999999 4455542
Q ss_pred --HHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHHHHHHHH
Q 046569 137 --KALFRRSQAYLKTSELEKDEADIKRALTIDPNN------RDVKLVYMELKENQREYAKY 189 (202)
Q Consensus 137 --~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~~~~~~~~ 189 (202)
.+++++|.+|..+|++++|+..|++++.+.+.. ..+...+..+...+.+..+.
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A 255 (293)
T 2qfc_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAE 255 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHH
T ss_pred hHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 689999999999999999999999999886431 56667777776666554433
No 133
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.28 E-value=2.5e-11 Score=78.96 Aligned_cols=89 Identities=15% Similarity=0.064 Sum_probs=81.8
Q ss_pred HHHhHHHHHcCcHHHHHHHHHHHHH--hHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCC
Q 046569 74 KHDGNLLFRAGKYWRASKKYEKATN--GLRLS-CYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTS 150 (202)
Q Consensus 74 ~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~-~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~ 150 (202)
...|..++..|+|++|+..|.++++ |..+. +++++|.+|..+|++++|+.+|+++++++|+++.++++ +
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~ 75 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------K 75 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------H
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------H
Confidence 5789999999999999999999999 88888 99999999999999999999999999999999998865 6
Q ss_pred CHHHHHHHHHHHHhcCCCCH
Q 046569 151 ELEKDEADIKRALTIDPNNR 170 (202)
Q Consensus 151 ~~~~A~~~~~~a~~l~p~~~ 170 (202)
.+.++...|+++...+|++.
T Consensus 76 ~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 76 MVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp HHHHHHHHHCCTTHHHHCCS
T ss_pred HHHHHHHHHHHHhccCcccc
Confidence 78889999999988888764
No 134
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.27 E-value=3e-11 Score=85.84 Aligned_cols=96 Identities=15% Similarity=0.143 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh------------------CCCChHHHHHHHHHHhcCCCHHHHHHHHHH
Q 046569 100 LRLSCYLNNAACKLKLEDYSEASSLCTKVLEL------------------EPLNVKALFRRSQAYLKTSELEKDEADIKR 161 (202)
Q Consensus 100 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------------------~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~ 161 (202)
..+..+.++|..+++.|+|++|+..|.+++.+ +|.++.+|+++|.+|..+|++++|+.++++
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 35678999999999999999999999999999 777789999999999999999999999999
Q ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046569 162 ALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGS 196 (202)
Q Consensus 162 a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 196 (202)
++.++|++..+...+..+...+....+... .|.+
T Consensus 89 al~~~p~~~~a~~~~g~~~~~~g~~~~A~~-~~~~ 122 (162)
T 3rkv_A 89 VLKREETNEKALFRRAKARIAAWKLDEAEE-DLKL 122 (162)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHH-HHHH
T ss_pred HHhcCCcchHHHHHHHHHHHHHhcHHHHHH-HHHH
Confidence 999999999999999998888776664433 4443
No 135
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.27 E-value=6.8e-11 Score=95.21 Aligned_cols=120 Identities=11% Similarity=0.005 Sum_probs=80.3
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH---------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCC----
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN---------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPL---- 134 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~---------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~---- 134 (202)
..+..+...|..++..|++..|+..|.+|++ +....++.++|.+|..+|+|++|+..+.+++.+.+.
T Consensus 139 ~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~ 218 (378)
T 3q15_A 139 EKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQND 218 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCH
Confidence 4456666777777777777777777777776 234556777777777777777777777777765321
Q ss_pred --ChHHHHHHHHHHhcCCCHHHHHHHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHH
Q 046569 135 --NVKALFRRSQAYLKTSELEKDEADIKRALT-----IDPNNRDVKLVYMELKENQREYA 187 (202)
Q Consensus 135 --~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~-----l~p~~~~~~~~l~~~~~~~~~~~ 187 (202)
...++.++|.+|..+|++++|+.+|++++. .+|....+...++.+...+.+..
T Consensus 219 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 278 (378)
T 3q15_A 219 RFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQ 278 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHH
Confidence 234667777777777777777777777777 56666666666666665554443
No 136
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.27 E-value=6.2e-11 Score=83.58 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=87.1
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHH--HHH
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRR--SQA 145 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~--g~~ 145 (202)
...+...|..++..|+|++|+..|.+++. |..+.++.++|.++..+|++++|+.++.++++++|.++.++..+ +..
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~ 126 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNK 126 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 55677899999999999999999999999 88899999999999999999999999999999999999888554 455
Q ss_pred HhcCCCHHHHHHHHHHHHhc
Q 046569 146 YLKTSELEKDEADIKRALTI 165 (202)
Q Consensus 146 ~~~~~~~~~A~~~~~~a~~l 165 (202)
+...|++++|+..+.++..+
T Consensus 127 ~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 127 IVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccchHHH
Confidence 88999999999999987665
No 137
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.27 E-value=1.3e-10 Score=93.59 Aligned_cols=101 Identities=19% Similarity=0.016 Sum_probs=93.0
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh-----hCCC
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN--------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLE-----LEPL 134 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-----~~p~ 134 (202)
..+..+...|..+...|+|++|+..|.+|+. +....++.++|.+|..+|++++|+.++++++. .+|.
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~ 259 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDL 259 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChh
Confidence 4567788999999999999999999999998 35667899999999999999999999999999 7788
Q ss_pred ChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCC
Q 046569 135 NVKALFRRSQAYLKTSELEKDEADIKRALTIDPN 168 (202)
Q Consensus 135 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~ 168 (202)
.+.+++.+|.++..+|++++|...+++++.+.+.
T Consensus 260 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 260 LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999654
No 138
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.26 E-value=9.8e-11 Score=90.52 Aligned_cols=99 Identities=21% Similarity=0.162 Sum_probs=90.1
Q ss_pred HHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH----------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh-----
Q 046569 67 IEACERKKHDGNLLFRAGKYWRASKKYEKATN----------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLEL----- 131 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~----------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~----- 131 (202)
...+..+...|..++..|++++|+..|.+++. +....++.++|.++...|++++|+..+++++.+
T Consensus 108 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~ 187 (311)
T 3nf1_A 108 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKL 187 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHh
Confidence 34466778899999999999999999999997 566778999999999999999999999999998
Q ss_pred ---CCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhc
Q 046569 132 ---EPLNVKALFRRSQAYLKTSELEKDEADIKRALTI 165 (202)
Q Consensus 132 ---~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l 165 (202)
.|....++..+|.++...|++++|...|++++.+
T Consensus 188 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 188 GPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 224 (311)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 6667889999999999999999999999999985
No 139
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.26 E-value=1.1e-10 Score=94.03 Aligned_cols=101 Identities=17% Similarity=0.176 Sum_probs=91.8
Q ss_pred HHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh-----hC-
Q 046569 67 IEACERKKHDGNLLFRAGKYWRASKKYEKATN--------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLE-----LE- 132 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-----~~- 132 (202)
...+..+...|..+...|+|++|+..|.+++. +....++.++|.+|..+|++++|+.++++++. .+
T Consensus 181 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~ 260 (383)
T 3ulq_A 181 IRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNIL 260 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccc
Confidence 34567788899999999999999999999998 45557899999999999999999999999999 46
Q ss_pred CCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC
Q 046569 133 PLNVKALFRRSQAYLKTSELEKDEADIKRALTIDP 167 (202)
Q Consensus 133 p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p 167 (202)
|..+.+++++|.++..+|++++|...+++++.+.+
T Consensus 261 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 261 PSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp GGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 77789999999999999999999999999999854
No 140
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.25 E-value=1.5e-10 Score=76.53 Aligned_cols=96 Identities=15% Similarity=0.167 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 046569 101 RLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELK 180 (202)
Q Consensus 101 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 180 (202)
.+..+..+|.++...|++++|+..+++++..+|.++.+++.+|.++...|++++|+..+++++.++|+++.+...+..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHhh
Q 046569 181 ENQREYAKYQAEIFGSM 197 (202)
Q Consensus 181 ~~~~~~~~~~~~~~~~~ 197 (202)
....+..+.. ..|.+.
T Consensus 83 ~~~~~~~~A~-~~~~~~ 98 (118)
T 1elw_A 83 EFLNRFEEAK-RTYEEG 98 (118)
T ss_dssp HHTTCHHHHH-HHHHHH
T ss_pred HHHhhHHHHH-HHHHHH
Confidence 7776655433 344443
No 141
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.25 E-value=1.4e-10 Score=93.55 Aligned_cols=119 Identities=14% Similarity=0.108 Sum_probs=103.9
Q ss_pred HHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hH----HHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh------CCC
Q 046569 67 IEACERKKHDGNLLFRAGKYWRASKKYEKATN--GL----RLSCYLNNAACKLKLEDYSEASSLCTKVLEL------EPL 134 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~ 134 (202)
...+..+...|..++..|+|++|+..|++++. |. ...++.++|.+|..+|++++|+..+++++.+ .|.
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 124 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchH
Confidence 45677888999999999999999999999999 33 3468999999999999999999999999988 566
Q ss_pred ChHHHHHHHHHHhcCCCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHHHH
Q 046569 135 NVKALFRRSQAYLKTSELEKDEADIKRALTI------DPNNRDVKLVYMELKENQRE 185 (202)
Q Consensus 135 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l------~p~~~~~~~~l~~~~~~~~~ 185 (202)
...+++.+|.++...|++++|+..|++++.+ .|....+...+..+......
T Consensus 125 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 125 EAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 7889999999999999999999999999999 45556677777777666655
No 142
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.25 E-value=1.6e-10 Score=90.66 Aligned_cols=115 Identities=9% Similarity=0.002 Sum_probs=88.4
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHH
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLS-CYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAY 146 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~-~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 146 (202)
...+...|..+...|++++|...|+++++ |..+. +|.++|.++.+.|++++|+..|+++++.+|.+...|...+...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~ 178 (308)
T 2ond_A 99 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME 178 (308)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 34556777778888888888888888888 55554 8888888888888888888888888888887777777666553
Q ss_pred h-cCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 046569 147 L-KTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQR 184 (202)
Q Consensus 147 ~-~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~ 184 (202)
. ..|++++|...|++++.++|+++.+...+..+.....
T Consensus 179 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g 217 (308)
T 2ond_A 179 YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLN 217 (308)
T ss_dssp HHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCC
Confidence 3 3688888888888888888888877777776655443
No 143
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.25 E-value=6.8e-11 Score=92.90 Aligned_cols=101 Identities=13% Similarity=0.092 Sum_probs=87.7
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC----
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN--------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLN---- 135 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---- 135 (202)
..+..+...|..+...|+|++|+..|.+|+. .....++.++|.+|.. |++++|+.+|++++.+.|..
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~ 152 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLR 152 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChh
Confidence 3466778889999999999999999999998 2456789999999988 99999999999999987643
Q ss_pred --hHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCC
Q 046569 136 --VKALFRRSQAYLKTSELEKDEADIKRALTIDPNN 169 (202)
Q Consensus 136 --~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~ 169 (202)
..++.++|.+|..+|++++|+.+|++++.+.|.+
T Consensus 153 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 153 QAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 5788999999999999999999999999987654
No 144
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.24 E-value=3.5e-11 Score=88.34 Aligned_cols=116 Identities=12% Similarity=-0.036 Sum_probs=93.8
Q ss_pred HHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCCh----------------HHHHHH
Q 046569 81 FRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNV----------------KALFRR 142 (202)
Q Consensus 81 ~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----------------~~~~~~ 142 (202)
-..++|+.|.+.+..... +.....+.++|.+++..|+|++|+..|++++.+.|.++ .+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 94 (198)
T 2fbn_A 15 ENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNL 94 (198)
T ss_dssp -------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHH
Confidence 344566666666655544 67788899999999999999999999999999999887 899999
Q ss_pred HHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 143 SQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 143 g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
|.++..+|++++|+.+|++++.++|.+..+...++.+...+.+..+.. ..|++.
T Consensus 95 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~-~~~~~a 148 (198)
T 2fbn_A 95 ATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAK-ENLYKA 148 (198)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHH-HHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHH-HHHHHH
Confidence 999999999999999999999999999999999999888777665433 344443
No 145
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.24 E-value=2.5e-10 Score=76.84 Aligned_cols=91 Identities=20% Similarity=0.220 Sum_probs=84.1
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYME 178 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~ 178 (202)
+..+.++..+|.++...|++++|+..+++++..+|+++.+++.+|.++...|++++|+.++++++.++|+++.+...+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 88 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGL 88 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHH
Confidence 66788999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHH
Q 046569 179 LKENQREYAKY 189 (202)
Q Consensus 179 ~~~~~~~~~~~ 189 (202)
+.....+..+.
T Consensus 89 ~~~~~~~~~~A 99 (131)
T 2vyi_A 89 ALSSLNKHVEA 99 (131)
T ss_dssp HHHHTTCHHHH
T ss_pred HHHHhCCHHHH
Confidence 87776655533
No 146
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.24 E-value=1.1e-10 Score=79.22 Aligned_cols=94 Identities=23% Similarity=0.244 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCCh---HHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCC---HHHHHHH
Q 046569 103 SCYLNNAACKLKLEDYSEASSLCTKVLELEPLNV---KALFRRSQAYLKTSELEKDEADIKRALTIDPNN---RDVKLVY 176 (202)
Q Consensus 103 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~---~~~~~~l 176 (202)
.+++++|.+++..|+|++|+..+++++..+|+++ .+++.+|.++...|++++|+..|++++..+|++ +.+...+
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 4678999999999999999999999999999988 899999999999999999999999999999999 8888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 046569 177 MELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~ 197 (202)
..+...+.+..+.. ..|.++
T Consensus 83 a~~~~~~g~~~~A~-~~~~~~ 102 (129)
T 2xev_A 83 GLSQYGEGKNTEAQ-QTLQQV 102 (129)
T ss_dssp HHHHHHTTCHHHHH-HHHHHH
T ss_pred HHHHHHcCCHHHHH-HHHHHH
Confidence 88877766555333 344444
No 147
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.21 E-value=1.7e-10 Score=84.08 Aligned_cols=119 Identities=9% Similarity=0.081 Sum_probs=97.2
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh---CCC---
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN--------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLEL---EPL--- 134 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---~p~--- 134 (202)
.+..+...|..+...|++++|+..|.+++. +....++.++|.+|..+|++++|+..+.+++.+ .++
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 104 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPL 104 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHH
Confidence 467788999999999999999999999998 677889999999999999999999999999988 342
Q ss_pred -ChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC--CCH----HHHHHHHHHHHHHHHHH
Q 046569 135 -NVKALFRRSQAYLKTSELEKDEADIKRALTIDP--NNR----DVKLVYMELKENQREYA 187 (202)
Q Consensus 135 -~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p--~~~----~~~~~l~~~~~~~~~~~ 187 (202)
...+++++|.++...|++++|...+++++.+.+ .++ .+...+..+.....+..
T Consensus 105 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 164 (203)
T 3gw4_A 105 AASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLL 164 (203)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHH
Confidence 356799999999999999999999999998743 232 22345555554444333
No 148
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.21 E-value=1.1e-10 Score=96.10 Aligned_cols=111 Identities=14% Similarity=0.075 Sum_probs=95.1
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH----------hHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHhhhCCCChH
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN----------GLRLSCYLNNAACKLKLE--DYSEASSLCTKVLELEPLNVK 137 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~----------~~~~~~~~~~a~~~~~~~--~~~~A~~~~~~al~~~p~~~~ 137 (202)
+..+.+.|..++..|+|++|+..|.+++. +..+.++.++|.++...+ +|++|+.+|+++++++|+++.
T Consensus 94 ~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~ 173 (472)
T 4g1t_A 94 LVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPE 173 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHH
Confidence 34566789999999999999999999988 345778899998887664 799999999999999999999
Q ss_pred HHHHHHHHHh---cCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 046569 138 ALFRRSQAYL---KTSELEKDEADIKRALTIDPNNRDVKLVYMELK 180 (202)
Q Consensus 138 ~~~~~g~~~~---~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 180 (202)
++..+|.++. ..+++++|+..|+++++++|+++.+...+....
T Consensus 174 ~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~ 219 (472)
T 4g1t_A 174 FTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKL 219 (472)
T ss_dssp HHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHH
Confidence 9999998855 457788999999999999999998887776543
No 149
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.21 E-value=1.7e-10 Score=90.53 Aligned_cols=111 Identities=14% Similarity=0.142 Sum_probs=96.3
Q ss_pred HHHHHHHHhHHHH-------HcCcH-------HHHHHHHHHHHH---hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh
Q 046569 69 ACERKKHDGNLLF-------RAGKY-------WRASKKYEKATN---GLRLSCYLNNAACKLKLEDYSEASSLCTKVLEL 131 (202)
Q Consensus 69 ~a~~~~~~g~~~~-------~~~~~-------~~A~~~y~~al~---~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 131 (202)
.+..+...|..+. ..|++ ++|+..|.+|+. |....+|.++|.++...|++++|+..|++++++
T Consensus 49 ~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 128 (308)
T 2ond_A 49 HPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAI 128 (308)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Confidence 3445566666655 35775 999999999998 788899999999999999999999999999999
Q ss_pred CCCChH-HHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 046569 132 EPLNVK-ALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMEL 179 (202)
Q Consensus 132 ~p~~~~-~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~ 179 (202)
+|.++. +|..+|.++...|++++|...|++++..+|.+..+......+
T Consensus 129 ~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~ 177 (308)
T 2ond_A 129 EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALM 177 (308)
T ss_dssp SSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHH
T ss_pred cccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 999987 999999999999999999999999999999887666544444
No 150
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.20 E-value=1.4e-10 Score=90.07 Aligned_cols=91 Identities=19% Similarity=0.209 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 046569 100 LRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMEL 179 (202)
Q Consensus 100 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~ 179 (202)
..+..+.++|.+++..|+|++|+..|++++..+|+++.+++++|.++..+|++++|+.+|++++.++|++..+...++.+
T Consensus 2 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (281)
T 2c2l_A 2 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (281)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHH
Q 046569 180 KENQREYAKYQ 190 (202)
Q Consensus 180 ~~~~~~~~~~~ 190 (202)
...+.+..+..
T Consensus 82 ~~~~g~~~~A~ 92 (281)
T 2c2l_A 82 QLEMESYDEAI 92 (281)
T ss_dssp HHHTTCHHHHH
T ss_pred HHHcCCHHHHH
Confidence 87776655443
No 151
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.20 E-value=3.9e-10 Score=90.30 Aligned_cols=120 Identities=15% Similarity=0.078 Sum_probs=100.7
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC----
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN--------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLN---- 135 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---- 135 (202)
..+..+...|..++..|++++|+..|.+++. +....++.++|.+|..+|++++|+.++++++.+.|..
T Consensus 185 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 264 (406)
T 3sf4_A 185 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRA 264 (406)
T ss_dssp HHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCch
Confidence 3455678899999999999999999999998 3445589999999999999999999999999887755
Q ss_pred --hHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHHHHHH
Q 046569 136 --VKALFRRSQAYLKTSELEKDEADIKRALTIDPNN------RDVKLVYMELKENQREYA 187 (202)
Q Consensus 136 --~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~~~~~~ 187 (202)
..++..+|.++...|++++|...|++++.+.+.. ..+...++.+.....+..
T Consensus 265 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 324 (406)
T 3sf4_A 265 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHD 324 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHH
Confidence 7789999999999999999999999999986644 456666666666554443
No 152
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.20 E-value=1.8e-10 Score=81.07 Aligned_cols=100 Identities=16% Similarity=0.211 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHhhhC-C-CChHHHHHHHHHHhcCCCHHHHHHH
Q 046569 86 YWRASKKYEKATN--GLRLSCYLNNAACKLKLE---DYSEASSLCTKVLELE-P-LNVKALFRRSQAYLKTSELEKDEAD 158 (202)
Q Consensus 86 ~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~-p-~~~~~~~~~g~~~~~~~~~~~A~~~ 158 (202)
...+.+.|.+.+. +....+.++.|.++.+.+ +..+++..++.+++.+ | ++.+++|++|.+++++++|++|+.+
T Consensus 14 l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y 93 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKY 93 (152)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHH
Confidence 4456667777766 778899999999999988 7779999999999998 7 6799999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 046569 159 IKRALTIDPNNRDVKLVYMELKENQRE 185 (202)
Q Consensus 159 ~~~a~~l~p~~~~~~~~l~~~~~~~~~ 185 (202)
++++++++|+|..+...+..+.+.+++
T Consensus 94 ~~~lL~ieP~n~QA~~Lk~~ie~~~~k 120 (152)
T 1pc2_A 94 VRGLLQTEPQNNQAKELERLIDKAMKK 120 (152)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999998887754
No 153
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.20 E-value=1.9e-10 Score=85.62 Aligned_cols=109 Identities=16% Similarity=0.036 Sum_probs=64.7
Q ss_pred HHHHHHhHHHHHcC----cHHHHHHHHHHHHHhHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHhhhCC--CChHHHH
Q 046569 71 ERKKHDGNLLFRAG----KYWRASKKYEKATNGLRLSCYLNNAACKLK----LEDYSEASSLCTKVLELEP--LNVKALF 140 (202)
Q Consensus 71 ~~~~~~g~~~~~~~----~~~~A~~~y~~al~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p--~~~~~~~ 140 (202)
..+...|..+.. + ++++|+.+|.+++++..+.+++++|.+|.. .+++++|+.+|.++++.+| .++.+++
T Consensus 51 ~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~ 129 (212)
T 3rjv_A 51 DALALLAQLKIR-NPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQM 129 (212)
T ss_dssp HHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHH
Confidence 344455555544 4 566666666666555556666666666655 5566666666666666665 2466666
Q ss_pred HHHHHHhc----CCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 046569 141 RRSQAYLK----TSELEKDEADIKRALTIDPNNRDVKLVYMELKE 181 (202)
Q Consensus 141 ~~g~~~~~----~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 181 (202)
++|.+|.. .+++++|+..|+++.++ |.++.+...+..+..
T Consensus 130 ~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~ 173 (212)
T 3rjv_A 130 LLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQ 173 (212)
T ss_dssp HHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHH
Confidence 66666666 66666666666666666 445555555555443
No 154
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.20 E-value=2e-10 Score=85.54 Aligned_cols=111 Identities=14% Similarity=0.109 Sum_probs=100.9
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhc----CHHHHHHHHHHHhhhCCCChHHHHHHHH
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATNGLRLSCYLNNAACKLKLE----DYSEASSLCTKVLELEPLNVKALFRRSQ 144 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~a~~~~~~~----~~~~A~~~~~~al~~~p~~~~~~~~~g~ 144 (202)
.+..+...|..++..+++++|+.+|+++++..++.+++++|.+|.. + ++++|+.+|.++.+ +.++.+++++|.
T Consensus 17 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~ 93 (212)
T 3rjv_A 17 DRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLAR 93 (212)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHH
Confidence 4677889999999999999999999999998889999999999998 7 99999999999954 578999999999
Q ss_pred HHhc----CCCHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHH
Q 046569 145 AYLK----TSELEKDEADIKRALTIDPN--NRDVKLVYMELKEN 182 (202)
Q Consensus 145 ~~~~----~~~~~~A~~~~~~a~~l~p~--~~~~~~~l~~~~~~ 182 (202)
+|.. .+++++|+..|+++.+..|. ++.+...+..+...
T Consensus 94 ~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 94 VLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp HHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 9998 99999999999999999984 57888888887665
No 155
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=2.6e-10 Score=78.81 Aligned_cols=98 Identities=15% Similarity=0.105 Sum_probs=86.7
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC---hHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHH
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLN---VKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLV 175 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~ 175 (202)
+.....++.+|.+++..|+|++|+..++++++.+|++ ..+++.+|.++...|++++|+..|++++.++|++..+...
T Consensus 25 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 104 (148)
T 2dba_A 25 ASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYR 104 (148)
T ss_dssp CCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHH
Confidence 5567889999999999999999999999999999987 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 046569 176 YMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
+..+...+.+..+.. ..|.+.
T Consensus 105 ~a~~~~~~~~~~~A~-~~~~~a 125 (148)
T 2dba_A 105 RSQALEKLGRLDQAV-LDLQRC 125 (148)
T ss_dssp HHHHHHHHTCHHHHH-HHHHHH
T ss_pred HHHHHHHcCCHHHHH-HHHHHH
Confidence 999887776655433 344443
No 156
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.19 E-value=4.2e-10 Score=92.79 Aligned_cols=111 Identities=11% Similarity=0.096 Sum_probs=92.9
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH----------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh-----CCC
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN----------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLEL-----EPL 134 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~----------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~p~ 134 (202)
+....+.+......|+|++|+..|.++++ |.....+.|+|.+|..+|+|++|+..+.+++.+ .|+
T Consensus 298 ~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~ 377 (433)
T 3qww_A 298 ARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVY 377 (433)
T ss_dssp HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCC
Confidence 33444555555567899999999999998 778888999999999999999999999999976 455
Q ss_pred C---hHHHHHHHHHHhcCCCHHHHHHHHHHHHhc-----CCCCHHHHHHHHHHH
Q 046569 135 N---VKALFRRSQAYLKTSELEKDEADIKRALTI-----DPNNRDVKLVYMELK 180 (202)
Q Consensus 135 ~---~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l-----~p~~~~~~~~l~~~~ 180 (202)
+ ...+.++|.+|..+|++++|+..|++|+.+ -|+++.+......+.
T Consensus 378 Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l~ 431 (433)
T 3qww_A 378 SLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEIE 431 (433)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHh
Confidence 5 557999999999999999999999999986 488888777655543
No 157
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.19 E-value=1.1e-09 Score=83.87 Aligned_cols=107 Identities=14% Similarity=0.086 Sum_probs=68.9
Q ss_pred HHHHHHhHHHHH----cCcHHHHHHHHHHHHHhHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHhhhCCCChHHHHHH
Q 046569 71 ERKKHDGNLLFR----AGKYWRASKKYEKATNGLRLSCYLNNAACKLK----LEDYSEASSLCTKVLELEPLNVKALFRR 142 (202)
Q Consensus 71 ~~~~~~g~~~~~----~~~~~~A~~~y~~al~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~ 142 (202)
..+...|..+.. .+++++|+..|.++++...+.+++++|.+|.. .+++++|+.+++++++.+ ++.+++.+
T Consensus 39 ~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~l 116 (273)
T 1ouv_A 39 SGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASL 116 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHH
Confidence 345566666666 67777777777777664456666677777766 667777777777666653 56666667
Q ss_pred HHHHhc----CCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 046569 143 SQAYLK----TSELEKDEADIKRALTIDPNNRDVKLVYMELKE 181 (202)
Q Consensus 143 g~~~~~----~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 181 (202)
|.+|.. .+++++|+.+|+++++++ ++.+...+..+..
T Consensus 117 g~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~ 157 (273)
T 1ouv_A 117 GGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYD 157 (273)
T ss_dssp HHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH
T ss_pred HHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHH
Confidence 776666 667777777777666654 3444444444433
No 158
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.19 E-value=4.5e-10 Score=87.20 Aligned_cols=116 Identities=16% Similarity=0.125 Sum_probs=98.0
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hH----HHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh------CCCChH
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GL----RLSCYLNNAACKLKLEDYSEASSLCTKVLEL------EPLNVK 137 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~~ 137 (202)
+..+...|..++..|++++|+..|++++. |. ...++..+|.+|...|++++|+..+++++.+ .|..+.
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 84 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAK 84 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHH
Confidence 55778899999999999999999999999 32 3678999999999999999999999999987 445578
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHHHH
Q 046569 138 ALFRRSQAYLKTSELEKDEADIKRALTIDPNN------RDVKLVYMELKENQRE 185 (202)
Q Consensus 138 ~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~~~~ 185 (202)
++..+|.++...|++++|+..+++++.+.|.. ..+...+..+......
T Consensus 85 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 85 ASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 89999999999999999999999999987643 2255566666555544
No 159
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.18 E-value=4.3e-10 Score=78.26 Aligned_cols=100 Identities=18% Similarity=0.169 Sum_probs=88.1
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCC------
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN--------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPL------ 134 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~------ 134 (202)
.+..+...|..++..|++++|+..|.+++. +....++.++|.++..+|++++|+..+++++.+.+.
T Consensus 48 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 127 (164)
T 3ro3_A 48 ERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIG 127 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHh
Confidence 345778899999999999999999999998 335778999999999999999999999999987432
Q ss_pred ChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCC
Q 046569 135 NVKALFRRSQAYLKTSELEKDEADIKRALTIDPN 168 (202)
Q Consensus 135 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~ 168 (202)
...++..+|.++...|++++|...+++++.+...
T Consensus 128 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 128 EGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 2567899999999999999999999999988654
No 160
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.18 E-value=1.2e-09 Score=92.95 Aligned_cols=134 Identities=10% Similarity=-0.014 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHhHHHHHcCcH-HHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHhh
Q 046569 64 HEKIEACERKKHDGNLLFRAGKY-WRASKKYEKATN--GLRLSCYLNNAACKLKLED----------YSEASSLCTKVLE 130 (202)
Q Consensus 64 ~~~~~~a~~~~~~g~~~~~~~~~-~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~----------~~~A~~~~~~al~ 130 (202)
..+.+.............+.+++ ++|+..|.++|. |.+..+|+.++.++..+++ +++++.+++++++
T Consensus 22 ~~k~~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~ 101 (567)
T 1dce_A 22 EQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLR 101 (567)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHH
Confidence 33444444444455555566665 678999999999 9999999999999999998 9999999999999
Q ss_pred hCCCChHHHHHHHHHHhcCC--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 131 LEPLNVKALFRRSQAYLKTS--ELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 131 ~~p~~~~~~~~~g~~~~~~~--~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
.+|++..+|+.++.++...+ ++++|++++.++++++|.|..+.....-+...+....+.+-..+.++
T Consensus 102 ~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~ 170 (567)
T 1dce_A 102 VNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSL 170 (567)
T ss_dssp HCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTT
T ss_pred hCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 99999999999999999999 77999999999999999999999998888777652223344444443
No 161
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.18 E-value=3.6e-10 Score=87.77 Aligned_cols=106 Identities=10% Similarity=0.004 Sum_probs=94.2
Q ss_pred HHHHHhHHHHHcCcHHHHHHHHHHHHH---hH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhC--CC-ChHHHHHHHH
Q 046569 72 RKKHDGNLLFRAGKYWRASKKYEKATN---GL-RLSCYLNNAACKLKLEDYSEASSLCTKVLELE--PL-NVKALFRRSQ 144 (202)
Q Consensus 72 ~~~~~g~~~~~~~~~~~A~~~y~~al~---~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--p~-~~~~~~~~g~ 144 (202)
..+..|..+++.++|.+|+..|+.++. +. ...+++++|.++..+|++++|+.+|++++... |. .+.+++++|.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~gl 216 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAM 216 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHH
Confidence 678899999999999999999998887 22 25689999999999999999999999998654 55 6779999999
Q ss_pred HHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 046569 145 AYLKTSELEKDEADIKRALTIDPNNRDVKLVYME 178 (202)
Q Consensus 145 ~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~ 178 (202)
++..+|+.++|...|++++..+|+ +.+...|..
T Consensus 217 aL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL~~ 249 (282)
T 4f3v_A 217 ARRSQGNESAAVALLEWLQTTHPE-PKVAAALKD 249 (282)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHHHC
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHHhC
Confidence 999999999999999999999999 888777754
No 162
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.18 E-value=3e-11 Score=96.52 Aligned_cols=101 Identities=10% Similarity=-0.003 Sum_probs=57.2
Q ss_pred HHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHH-Hhc
Q 046569 72 RKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQA-YLK 148 (202)
Q Consensus 72 ~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~-~~~ 148 (202)
.+...|..+++.|+|++|+..|.++|. |.+..+++++|.+|..+|+|++|+.+|+++++++|+++.++..++.+ ...
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~ 311 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQE 311 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 677899999999999999999999999 89999999999999999999999999999999999999999999988 556
Q ss_pred CCCHHHHHHHHHHHHhcCCCCHHH
Q 046569 149 TSELEKDEADIKRALTIDPNNRDV 172 (202)
Q Consensus 149 ~~~~~~A~~~~~~a~~l~p~~~~~ 172 (202)
.+..+.+...|.+++...|+++..
T Consensus 312 ~~~~~~a~~~~~~~l~~~p~~~~~ 335 (338)
T 2if4_A 312 KALYQKQKEMYKGIFKGKDEGGAK 335 (338)
T ss_dssp ------------------------
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCC
Confidence 677888999999999999988643
No 163
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.17 E-value=2.3e-10 Score=77.14 Aligned_cols=97 Identities=13% Similarity=0.147 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCC-------HHH
Q 046569 100 LRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNN-------RDV 172 (202)
Q Consensus 100 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~-------~~~ 172 (202)
..+.++..+|.++...|++++|+..+.+++..+|.++.+++.+|.++...|++++|+..|++++.+.|.+ ..+
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 81 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHH
Confidence 4678899999999999999999999999999999999999999999999999999999999999999877 778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 173 KLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 173 ~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
...++.+........+. ...|.+.
T Consensus 82 ~~~la~~~~~~~~~~~A-~~~~~~~ 105 (131)
T 1elr_A 82 YARIGNSYFKEEKYKDA-IHFYNKS 105 (131)
T ss_dssp HHHHHHHHHHTTCHHHH-HHHHHHH
T ss_pred HHHHHHHHHHhccHHHH-HHHHHHH
Confidence 88888777666555433 2244443
No 164
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.17 E-value=8.6e-10 Score=73.50 Aligned_cols=96 Identities=26% Similarity=0.370 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 046569 101 RLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELK 180 (202)
Q Consensus 101 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 180 (202)
...++..+|.++...|++++|+..+.+++..+|.++.+++.+|.++...|++++|+..|++++..+|.++.+...+..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 87 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999988888887
Q ss_pred HHHHHHHHHHHHHHHhh
Q 046569 181 ENQREYAKYQAEIFGSM 197 (202)
Q Consensus 181 ~~~~~~~~~~~~~~~~~ 197 (202)
.......+. ...|.++
T Consensus 88 ~~~~~~~~A-~~~~~~~ 103 (125)
T 1na0_A 88 YKQGDYDEA-IEYYQKA 103 (125)
T ss_dssp HHTTCHHHH-HHHHHHH
T ss_pred HHhcCHHHH-HHHHHHH
Confidence 766554433 2244443
No 165
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.16 E-value=1.1e-09 Score=93.35 Aligned_cols=116 Identities=11% Similarity=0.009 Sum_probs=107.6
Q ss_pred HHHHHHHHHhHHHHHcCc----------HHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHhhhCC
Q 046569 68 EACERKKHDGNLLFRAGK----------YWRASKKYEKATN--GLRLSCYLNNAACKLKLE--DYSEASSLCTKVLELEP 133 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~----------~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~--~~~~A~~~~~~al~~~p 133 (202)
+....+..+|..+...++ +++++..|.+++. |.+..+|+.++-++..++ +|++|+.+++++++++|
T Consensus 61 ~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~ 140 (567)
T 1dce_A 61 DFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADE 140 (567)
T ss_dssp TCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhcc
Confidence 345567778888888777 9999999999999 999999999999999999 78999999999999999
Q ss_pred CChHHHHHHHHHHhcCC-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 046569 134 LNVKALFRRSQAYLKTS-ELEKDEADIKRALTIDPNNRDVKLVYMELKENQ 183 (202)
Q Consensus 134 ~~~~~~~~~g~~~~~~~-~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 183 (202)
.+..+|..++.++...| .++++++++.++++.+|.|..+...+..+...+
T Consensus 141 ~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l 191 (567)
T 1dce_A 141 RNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 191 (567)
T ss_dssp TCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhh
Confidence 99999999999999999 999999999999999999999999999887765
No 166
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.16 E-value=4.5e-09 Score=81.70 Aligned_cols=121 Identities=18% Similarity=0.081 Sum_probs=98.5
Q ss_pred HHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC---
Q 046569 67 IEACERKKHDGNLLFRAGKYWRASKKYEKATN--------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLN--- 135 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--- 135 (202)
......+...+..++..|+|++|+..|.++++ ......++.+|.++...|++++|+..+.+++...+..
T Consensus 72 ~~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 151 (293)
T 2qfc_A 72 IERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV 151 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCT
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCch
Confidence 34566778899999999999999999999998 2344567789999999999999999999999875533
Q ss_pred ---hHHHHHHHHHHhcCCCHHHHHHHHHHHH---hcCCCCH----HHHHHHHHHHHHHHHHH
Q 046569 136 ---VKALFRRSQAYLKTSELEKDEADIKRAL---TIDPNNR----DVKLVYMELKENQREYA 187 (202)
Q Consensus 136 ---~~~~~~~g~~~~~~~~~~~A~~~~~~a~---~l~p~~~----~~~~~l~~~~~~~~~~~ 187 (202)
..+++.+|.+|..+|++++|+..|++++ +..|++. .+..++..+...+.+..
T Consensus 152 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~ 213 (293)
T 2qfc_A 152 YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYE 213 (293)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHH
Confidence 5689999999999999999999999999 5566654 46666666665554444
No 167
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.16 E-value=3e-11 Score=100.85 Aligned_cols=100 Identities=17% Similarity=0.196 Sum_probs=89.7
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHH--
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQA-- 145 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~-- 145 (202)
+..+...|..++..|+|++|+..|+++++ |..+.+++++|.+|..+|++++|+..++++++++|+++.++..++.+
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~ 119 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNK 119 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 56778899999999999999999999999 89999999999999999999999999999999999999999999998
Q ss_pred HhcCCCHHHHHHHHH-----------HHHhcCCCC
Q 046569 146 YLKTSELEKDEADIK-----------RALTIDPNN 169 (202)
Q Consensus 146 ~~~~~~~~~A~~~~~-----------~a~~l~p~~ 169 (202)
+...|++++|+..++ +++.++|+.
T Consensus 120 ~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 120 IVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp HHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred HHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 999999999999999 888888764
No 168
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.15 E-value=8.5e-10 Score=85.60 Aligned_cols=129 Identities=14% Similarity=0.061 Sum_probs=104.4
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC----
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN--------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLN---- 135 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---- 135 (202)
..+..+...|..++..|++++|+..|.+++. +....++.++|.++...|++++|+..+++++.+.+..
T Consensus 181 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 260 (338)
T 3ro2_A 181 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRA 260 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchh
Confidence 3455677899999999999999999999998 3445589999999999999999999999999887655
Q ss_pred --hHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 136 --VKALFRRSQAYLKTSELEKDEADIKRALTIDPNN------RDVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 136 --~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
..++..+|.++...|++++|...+++++.+.|.. ..+...+..+.....+..+.. ..|.+.
T Consensus 261 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~a 329 (338)
T 3ro2_A 261 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAM-HFAEKH 329 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHH-HHHHHH
Confidence 7789999999999999999999999999986643 345666666666665544332 344444
No 169
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.15 E-value=3.9e-10 Score=90.33 Aligned_cols=119 Identities=16% Similarity=0.116 Sum_probs=100.9
Q ss_pred HHHHHHHHhHHHHHcCc--------------------HHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHhcCHHH
Q 046569 69 ACERKKHDGNLLFRAGK--------------------YWRASKKYEKATN--------GLRLSCYLNNAACKLKLEDYSE 120 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~--------------------~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~~~~~~ 120 (202)
.+..+...|..+...|+ +++|+..|.+++. +....++.++|.+|..+|++++
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 205 (406)
T 3sf4_A 126 EARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRD 205 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHH
T ss_pred hHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHH
Confidence 35578889999999999 9999999999987 5667789999999999999999
Q ss_pred HHHHHHHHhhhCCCChH------HHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHHHHHH
Q 046569 121 ASSLCTKVLELEPLNVK------ALFRRSQAYLKTSELEKDEADIKRALTIDPNN------RDVKLVYMELKENQREYA 187 (202)
Q Consensus 121 A~~~~~~al~~~p~~~~------~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~~~~~~ 187 (202)
|+..+++++.+.|.... ++..+|.++...|++++|+..|++++.+.|.. ..+...+..+.....+..
T Consensus 206 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 284 (406)
T 3sf4_A 206 AVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYE 284 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHH
Confidence 99999999998765543 89999999999999999999999999997765 556666666655544433
No 170
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.13 E-value=4.4e-10 Score=90.71 Aligned_cols=118 Identities=16% Similarity=0.074 Sum_probs=87.4
Q ss_pred HHHHHHHHHhHHHHHcCc-----------------HHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHhcCHHHHH
Q 046569 68 EACERKKHDGNLLFRAGK-----------------YWRASKKYEKATN--------GLRLSCYLNNAACKLKLEDYSEAS 122 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~-----------------~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~~~~~~A~ 122 (202)
..+..+...|..+...|+ +++|+..|.+++. +....++.++|.+|..+|++++|+
T Consensus 164 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 243 (411)
T 4a1s_A 164 SEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAI 243 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHH
Confidence 345566778888888888 8888888888876 455667888888888888888888
Q ss_pred HHHHHHhhhCCCChH------HHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHHHH
Q 046569 123 SLCTKVLELEPLNVK------ALFRRSQAYLKTSELEKDEADIKRALTIDPNN------RDVKLVYMELKENQRE 185 (202)
Q Consensus 123 ~~~~~al~~~p~~~~------~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~~~~ 185 (202)
.++++++++.|.... +++.+|.++...|++++|+..|++++.+.|.. ..+...+..+.....+
T Consensus 244 ~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~ 318 (411)
T 4a1s_A 244 EHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHE 318 (411)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC
Confidence 888888887664333 78888888888888888888888888887643 4455555555444433
No 171
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.13 E-value=2.2e-09 Score=88.45 Aligned_cols=113 Identities=12% Similarity=0.037 Sum_probs=94.8
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH----------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh-----CCC
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN----------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLEL-----EPL 134 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~----------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~p~ 134 (202)
+.........+..+|+|++|+..|+++++ +.....+.++|.+|..+|+|++|+..+.+++.+ .|+
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~ 366 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS 366 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC
Confidence 33444556677889999999999999997 778889999999999999999999999999965 455
Q ss_pred C---hHHHHHHHHHHhcCCCHHHHHHHHHHHHhc-----CCCCHHHHHHHHHHHHH
Q 046569 135 N---VKALFRRSQAYLKTSELEKDEADIKRALTI-----DPNNRDVKLVYMELKEN 182 (202)
Q Consensus 135 ~---~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l-----~p~~~~~~~~l~~~~~~ 182 (202)
+ ...++++|.+|..+|++++|+..|++|+.+ -|+++.+...+..+...
T Consensus 367 Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~ 422 (429)
T 3qwp_A 367 HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEEC 422 (429)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Confidence 5 457999999999999999999999999986 58888777665554443
No 172
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=99.13 E-value=1.4e-09 Score=71.92 Aligned_cols=84 Identities=15% Similarity=0.070 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhhhC-------CCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHH
Q 046569 102 LSCYLNNAACKLKLEDYSEASSLCTKVLELE-------PLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKL 174 (202)
Q Consensus 102 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-------p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~ 174 (202)
+.-++.+|..++..++|..|+.+++.|++.. +..+..+..+|.++..+|++++|+..+++++.++|+++.+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 3445667777777777777777777777642 345677888888888888888888888888888888888877
Q ss_pred HHHHHHHHHHH
Q 046569 175 VYMELKENQRE 185 (202)
Q Consensus 175 ~l~~~~~~~~~ 185 (202)
++..+...+++
T Consensus 85 n~~~~~~~~~~ 95 (104)
T 2v5f_A 85 NLKYFEYIMAK 95 (104)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHHHHHHHh
Confidence 77766665543
No 173
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.13 E-value=2.3e-10 Score=82.48 Aligned_cols=76 Identities=12% Similarity=-0.049 Sum_probs=67.1
Q ss_pred HHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC--hHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 046569 89 ASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLN--VKALFRRSQAYLKTSELEKDEADIKRALT 164 (202)
Q Consensus 89 A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~g~~~~~~~~~~~A~~~~~~a~~ 164 (202)
|+..|.+++. |.++.+++++|.++...|++++|+..+.++++.+|++ +.++..+|.++..+|+.++|...|++++.
T Consensus 93 a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 93 ELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 3444444444 7889999999999999999999999999999999976 66999999999999999999999998874
No 174
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.10 E-value=8.7e-10 Score=71.60 Aligned_cols=75 Identities=20% Similarity=0.130 Sum_probs=68.1
Q ss_pred hHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHH
Q 046569 99 GLRLSCYLNNAACKLKLED---YSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVK 173 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~ 173 (202)
|.++.++..+|.+++..++ .++|...+++++.++|+++.+++.+|..++..|+|++|+..+++++..+|.++...
T Consensus 3 p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~~~ 80 (93)
T 3bee_A 3 AVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLDRV 80 (93)
T ss_dssp CCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCCHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHH
Confidence 4568899999999987766 79999999999999999999999999999999999999999999999999964433
No 175
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.09 E-value=6.7e-10 Score=74.63 Aligned_cols=77 Identities=13% Similarity=0.075 Sum_probs=70.2
Q ss_pred HHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHH
Q 046569 67 IEACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRS 143 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 143 (202)
+..+..+...|..++..|+|++|+..|.++++ |.++.+++++|.++..+|++++|+..+.+++...|+++.......
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 102 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQ 102 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 45577889999999999999999999999999 999999999999999999999999999999999999987654333
No 176
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=99.09 E-value=1.8e-09 Score=71.43 Aligned_cols=74 Identities=20% Similarity=0.163 Sum_probs=68.9
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH---------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHH
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN---------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALF 140 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~---------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 140 (202)
+..+...|..++..++|..|+..|..|+. .....++.++|.|++++|+++.|+..++++++++|+++.+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 56788999999999999999999999998 246889999999999999999999999999999999999988
Q ss_pred HHH
Q 046569 141 RRS 143 (202)
Q Consensus 141 ~~g 143 (202)
+++
T Consensus 85 n~~ 87 (104)
T 2v5f_A 85 NLK 87 (104)
T ss_dssp HHH
T ss_pred hHH
Confidence 876
No 177
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.06 E-value=4.1e-09 Score=83.05 Aligned_cols=114 Identities=11% Similarity=0.012 Sum_probs=103.0
Q ss_pred HHHHHHhHHH----HHc---CcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHhhhCCCChHHH
Q 046569 71 ERKKHDGNLL----FRA---GKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYS--EASSLCTKVLELEPLNVKAL 139 (202)
Q Consensus 71 ~~~~~~g~~~----~~~---~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~--~A~~~~~~al~~~p~~~~~~ 139 (202)
..+..++..+ ... +++.+++..+.++++ |.+..+|+.++.+...++.++ ++++.++++++.+|.|..+|
T Consensus 104 ~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW 183 (306)
T 3dra_A 104 QIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAW 183 (306)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHH
Confidence 3445566666 555 789999999999999 999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHhcCCC------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 046569 140 FRRSQAYLKTSE------LEKDEADIKRALTIDPNNRDVKLVYMELKENQR 184 (202)
Q Consensus 140 ~~~g~~~~~~~~------~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~ 184 (202)
..++.++...+. ++++++.+.+++.++|+|.++...+..+.....
T Consensus 184 ~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~ 234 (306)
T 3dra_A 184 SHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFD 234 (306)
T ss_dssp HHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcC
Confidence 999999999998 999999999999999999999998888776654
No 178
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.06 E-value=4.3e-09 Score=82.90 Aligned_cols=114 Identities=11% Similarity=-0.078 Sum_probs=78.1
Q ss_pred HHHHHHHhHHHHHcC--cHHHHHHHHHHHHH--hHHHHHHHHHHHHH----HHh---cCHHHHHHHHHHHhhhCCCChHH
Q 046569 70 CERKKHDGNLLFRAG--KYWRASKKYEKATN--GLRLSCYLNNAACK----LKL---EDYSEASSLCTKVLELEPLNVKA 138 (202)
Q Consensus 70 a~~~~~~g~~~~~~~--~~~~A~~~y~~al~--~~~~~~~~~~a~~~----~~~---~~~~~A~~~~~~al~~~p~~~~~ 138 (202)
...+..+|..+...+ ++++++..+..+|. |.+..+|+.++.++ ..+ +++++++.+++++++.+|.+..+
T Consensus 67 ~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~a 146 (306)
T 3dra_A 67 YTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHV 146 (306)
T ss_dssp HHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHH
Confidence 344556666666666 77777777777776 67777777777776 555 56777777777777777777777
Q ss_pred HHHHHHHHhcCCCHH--HHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 046569 139 LFRRSQAYLKTSELE--KDEADIKRALTIDPNNRDVKLVYMELKENQ 183 (202)
Q Consensus 139 ~~~~g~~~~~~~~~~--~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 183 (202)
|+.++.++...+.++ ++++.+.++++.+|.|..+......+...+
T Consensus 147 W~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l 193 (306)
T 3dra_A 147 WSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSK 193 (306)
T ss_dssp HHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Confidence 777777777777766 777777777777777776666665554443
No 179
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.02 E-value=5.4e-09 Score=76.00 Aligned_cols=101 Identities=15% Similarity=0.048 Sum_probs=87.7
Q ss_pred HHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH-----h----HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCC--C
Q 046569 67 IEACERKKHDGNLLFRAGKYWRASKKYEKATN-----G----LRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPL--N 135 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~-----~----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~--~ 135 (202)
...+..+...|..+...|++++|+..|.+++. + ....++.++|.++..+|++++|+..+.+++.+.+. +
T Consensus 63 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 142 (203)
T 3gw4_A 63 TAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADD 142 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccc
Confidence 34567788999999999999999999999998 2 45678999999999999999999999999976432 2
Q ss_pred ----hHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC
Q 046569 136 ----VKALFRRSQAYLKTSELEKDEADIKRALTIDP 167 (202)
Q Consensus 136 ----~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p 167 (202)
..++..+|.++...|++++|...+++++.+..
T Consensus 143 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 143 QVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 34578999999999999999999999998854
No 180
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.02 E-value=3.1e-08 Score=78.71 Aligned_cols=114 Identities=11% Similarity=0.003 Sum_probs=100.6
Q ss_pred HHHHHHHhHHHHHcCc----------HHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHhhhCCCC
Q 046569 70 CERKKHDGNLLFRAGK----------YWRASKKYEKATN--GLRLSCYLNNAACKLKLE--DYSEASSLCTKVLELEPLN 135 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~----------~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~--~~~~A~~~~~~al~~~p~~ 135 (202)
...+..++..+...+. +.+++..+..++. |.+..+|+.++.++..++ .+++++.+++++++.+|.|
T Consensus 64 ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprN 143 (331)
T 3dss_A 64 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERN 143 (331)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCC
Confidence 3444555555554443 7899999999998 999999999999999999 4999999999999999999
Q ss_pred hHHHHHHHHHHhcCCC-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 046569 136 VKALFRRSQAYLKTSE-LEKDEADIKRALTIDPNNRDVKLVYMELKENQ 183 (202)
Q Consensus 136 ~~~~~~~g~~~~~~~~-~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 183 (202)
..+|..++.++...|. ++++++++.++++.+|.|..+...+..+...+
T Consensus 144 y~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 144 FHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHh
Confidence 9999999999999999 69999999999999999999999998887766
No 181
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.01 E-value=2.2e-09 Score=86.80 Aligned_cols=91 Identities=14% Similarity=0.052 Sum_probs=84.4
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHH
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQA 145 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 145 (202)
..+..+...|..+++.|+|++|+..|+++++ |..+.+++++|.+|..+|++++|+.+++++++++|++..++..++.+
T Consensus 271 ~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~ 350 (370)
T 1ihg_A 271 VALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKV 350 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3456778899999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred HhcCCCHHHHHHH
Q 046569 146 YLKTSELEKDEAD 158 (202)
Q Consensus 146 ~~~~~~~~~A~~~ 158 (202)
+..+++++++...
T Consensus 351 ~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 351 KQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH
Confidence 9999988887643
No 182
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.00 E-value=1.9e-08 Score=80.44 Aligned_cols=109 Identities=12% Similarity=0.014 Sum_probs=99.1
Q ss_pred HHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcC-C-CHH
Q 046569 79 LLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLE-DYSEASSLCTKVLELEPLNVKALFRRSQAYLKT-S-ELE 153 (202)
Q Consensus 79 ~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~-~-~~~ 153 (202)
.........+|+..+.++|. |.+..+|+.++.++..++ .+++++..++.++..+|.+..+|..++.++... + +++
T Consensus 63 ~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~ 142 (349)
T 3q7a_A 63 IAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPV 142 (349)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCH
T ss_pred HHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChH
Confidence 34445566899999999999 999999999999999999 599999999999999999999999999999998 7 899
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 046569 154 KDEADIKRALTIDPNNRDVKLVYMELKENQREYA 187 (202)
Q Consensus 154 ~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~ 187 (202)
+++..+.++++.+|.|..+.....-+-..+....
T Consensus 143 ~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~ 176 (349)
T 3q7a_A 143 SEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLG 176 (349)
T ss_dssp HHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccc
Confidence 9999999999999999999999888877776554
No 183
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.99 E-value=7e-09 Score=86.30 Aligned_cols=109 Identities=19% Similarity=0.152 Sum_probs=93.3
Q ss_pred HHHHHHhHHHHHcC---cHHHHHHHHHHHHHhHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHhhhCCCChHHHHHHH
Q 046569 71 ERKKHDGNLLFRAG---KYWRASKKYEKATNGLRLSCYLNNAACKLK----LEDYSEASSLCTKVLELEPLNVKALFRRS 143 (202)
Q Consensus 71 ~~~~~~g~~~~~~~---~~~~A~~~y~~al~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~g 143 (202)
..+...|..++..| ++++|+.+|.++++...+.+++++|.+|.. .+++++|+.+|+++++.+ ++.+++++|
T Consensus 329 ~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~Lg 406 (490)
T 2xm6_A 329 TAQANLGAIYFRLGSEEEHKKAVEWFRKAAAKGEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQLG 406 (490)
T ss_dssp HHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHH
Confidence 44567777777755 888999999999887778899999999998 899999999999999864 689999999
Q ss_pred HHHhc----CCCHHHHHHHHHHHHhcCCC---CHHHHHHHHHHHH
Q 046569 144 QAYLK----TSELEKDEADIKRALTIDPN---NRDVKLVYMELKE 181 (202)
Q Consensus 144 ~~~~~----~~~~~~A~~~~~~a~~l~p~---~~~~~~~l~~~~~ 181 (202)
.+|.. .+++++|...|+++++.+|+ ++.+...+..+..
T Consensus 407 ~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~~a~~~l~~~~~ 451 (490)
T 2xm6_A 407 EIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENRNITEKKLTA 451 (490)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHTTSCH
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCCHHHHHHHHhcCH
Confidence 99998 89999999999999999954 7888887777644
No 184
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.99 E-value=1.6e-08 Score=80.44 Aligned_cols=119 Identities=10% Similarity=-0.044 Sum_probs=100.5
Q ss_pred HHHHHcCcHH-HHHHHHHHHHH--hHHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHhhhCCCChHHHHHHHH
Q 046569 78 NLLFRAGKYW-RASKKYEKATN--GLRLSCYLNNAACKLKLED----------YSEASSLCTKVLELEPLNVKALFRRSQ 144 (202)
Q Consensus 78 ~~~~~~~~~~-~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~----------~~~A~~~~~~al~~~p~~~~~~~~~g~ 144 (202)
....+.|.+. +|+..+.++|. |.+..+|+.++.+...++. +++++.+++.++..+|.+..+|+.++.
T Consensus 37 ~~~~~~~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~w 116 (331)
T 3dss_A 37 FQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCW 116 (331)
T ss_dssp HHHHHTTCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 3334677775 89999999999 9999999999999998876 789999999999999999999999999
Q ss_pred HHhcCC--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046569 145 AYLKTS--ELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGS 196 (202)
Q Consensus 145 ~~~~~~--~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 196 (202)
++...+ .+++++.++.++++.+|.|..+.....-+-..+...-+.+-..+.+
T Consensus 117 lL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~ 170 (331)
T 3dss_A 117 LLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDS 170 (331)
T ss_dssp HHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHH
Confidence 999999 4999999999999999999999988887766654322233334433
No 185
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.99 E-value=1.8e-09 Score=84.11 Aligned_cols=94 Identities=11% Similarity=-0.082 Sum_probs=84.6
Q ss_pred HHHHHHhHHHHHcCcHHHHHHHHHHHH----------------------------------H--hHHHHHHHHHHHHHHH
Q 046569 71 ERKKHDGNLLFRAGKYWRASKKYEKAT----------------------------------N--GLRLSCYLNNAACKLK 114 (202)
Q Consensus 71 ~~~~~~g~~~~~~~~~~~A~~~y~~al----------------------------------~--~~~~~~~~~~a~~~~~ 114 (202)
..+...|..+...|++++|+..|.+++ . |.++.+++++|.++..
T Consensus 152 ~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~ 231 (287)
T 3qou_A 152 EIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQ 231 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHH
Confidence 455678889999999999887776642 2 8889999999999999
Q ss_pred hcCHHHHHHHHHHHhhhCCCC--hHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 046569 115 LEDYSEASSLCTKVLELEPLN--VKALFRRSQAYLKTSELEKDEADIKRALT 164 (202)
Q Consensus 115 ~~~~~~A~~~~~~al~~~p~~--~~~~~~~g~~~~~~~~~~~A~~~~~~a~~ 164 (202)
.|++++|+..+.+++..+|++ ..++.++|.++...|+.++|...|++++.
T Consensus 232 ~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 232 VGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp TTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 999999999999999999998 89999999999999999999999999875
No 186
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.96 E-value=1.1e-08 Score=71.14 Aligned_cols=97 Identities=8% Similarity=-0.090 Sum_probs=85.5
Q ss_pred HhHHHHHcCcHHHHHHHHHHHHHhHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhc---
Q 046569 76 DGNLLFRAGKYWRASKKYEKATNGLRLSCYLNNAACKLK----LEDYSEASSLCTKVLELEPLNVKALFRRSQAYLK--- 148 (202)
Q Consensus 76 ~g~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~--- 148 (202)
.|..+...+.+.+|+.+|.++.+..++.+++++|.+|.. .+++++|+.+|+++.+. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g 108 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACELNSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKG 108 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSS
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCC
Confidence 677777778889999999999998889999999999998 89999999999999987 689999999999999
Q ss_pred -CCCHHHHHHHHHHHHhcCCCCHHHHHHH
Q 046569 149 -TSELEKDEADIKRALTIDPNNRDVKLVY 176 (202)
Q Consensus 149 -~~~~~~A~~~~~~a~~l~p~~~~~~~~l 176 (202)
.+++++|+..|+++.+.. ++.+...+
T Consensus 109 ~~~d~~~A~~~~~~Aa~~g--~~~A~~~l 135 (138)
T 1klx_A 109 VVKNEKQAVKTFEKACRLG--SEDACGIL 135 (138)
T ss_dssp SCCCHHHHHHHHHHHHHTT--CHHHHHHC
T ss_pred CCcCHHHHHHHHHHHHHCC--CHHHHHHH
Confidence 999999999999999884 44444433
No 187
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.94 E-value=3.7e-09 Score=69.10 Aligned_cols=78 Identities=13% Similarity=0.029 Sum_probs=66.5
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC--hHHHHHHHH
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLN--VKALFRRSQ 144 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~g~ 144 (202)
.+..+...|..++..|+|++|+..|+++++ |..+.+|.++|.+|..+|++++|+..+++++++.|.+ ......+..
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~~ 85 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQD 85 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHHH
Confidence 356788999999999999999999999999 8899999999999999999999999999999997743 333333443
Q ss_pred HH
Q 046569 145 AY 146 (202)
Q Consensus 145 ~~ 146 (202)
.+
T Consensus 86 ~l 87 (100)
T 3ma5_A 86 AK 87 (100)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 188
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.93 E-value=5.3e-09 Score=74.20 Aligned_cols=72 Identities=15% Similarity=0.206 Sum_probs=66.2
Q ss_pred HHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCH----------HHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 046569 113 LKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSEL----------EKDEADIKRALTIDPNNRDVKLVYMELKEN 182 (202)
Q Consensus 113 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~----------~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 182 (202)
-+++.|++|+..+.++++++|+++.+|+++|.++..++++ ++|+..|++|++++|++..+...+..+...
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 3677899999999999999999999999999999999876 599999999999999999999999988876
Q ss_pred HH
Q 046569 183 QR 184 (202)
Q Consensus 183 ~~ 184 (202)
+.
T Consensus 93 lg 94 (158)
T 1zu2_A 93 FA 94 (158)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 189
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.92 E-value=2e-08 Score=84.35 Aligned_cols=127 Identities=10% Similarity=0.041 Sum_probs=98.4
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHH-
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLR-LSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQA- 145 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~-~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~- 145 (202)
...+...|..+...|++++|...|.+++. |.. ..+|.+.+.++.+.|++++|+..|+++++..|.+...+...+..
T Consensus 321 ~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~ 400 (530)
T 2ooe_A 321 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME 400 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHH
Confidence 34455667777889999999999999999 544 35899999999999999999999999999888877777766655
Q ss_pred HhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 146 YLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 146 ~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
+...|++++|...|+++++.+|+++.+...+..+........ +-+..|.+.
T Consensus 401 ~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~-~Ar~~~~~a 451 (530)
T 2ooe_A 401 YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDN-NTRVLFERV 451 (530)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHH-HHHHHHHHH
T ss_pred HHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHh-hHHHHHHHH
Confidence 446899999999999999999999888888877755443322 334444443
No 190
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.91 E-value=2.1e-08 Score=80.12 Aligned_cols=116 Identities=11% Similarity=-0.049 Sum_probs=96.1
Q ss_pred HHHHHHHHHhHHHHHcC-cHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHh-c-CHHHHHHHHHHHhhhCCCChHHHHHH
Q 046569 68 EACERKKHDGNLLFRAG-KYWRASKKYEKATN--GLRLSCYLNNAACKLKL-E-DYSEASSLCTKVLELEPLNVKALFRR 142 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~-~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~-~-~~~~A~~~~~~al~~~p~~~~~~~~~ 142 (202)
+....+..+|..+...+ .+++++..+..+|. |.+..+|+.++.++..+ + ++++++.+++++++.+|.+..+|..+
T Consensus 86 ~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R 165 (349)
T 3q7a_A 86 AHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYL 165 (349)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 45667778888888888 59999999999988 88888888888888887 7 88888888888888888888888888
Q ss_pred HHHHhcCCCHH--------HHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 046569 143 SQAYLKTSELE--------KDEADIKRALTIDPNNRDVKLVYMELKENQ 183 (202)
Q Consensus 143 g~~~~~~~~~~--------~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 183 (202)
+.++...+.++ ++++.+.++++.+|.|..+......+...+
T Consensus 166 ~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l 214 (349)
T 3q7a_A 166 HWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSR 214 (349)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTS
T ss_pred HHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Confidence 88888887777 888888888888888888877777665443
No 191
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.90 E-value=4.9e-08 Score=77.91 Aligned_cols=99 Identities=14% Similarity=0.121 Sum_probs=72.1
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhC--------C
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELE--------P 133 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--------p 133 (202)
+..+...|..++..|++++|+..|.+++. .....++.++|.++...|++++|+..+++++.+. |
T Consensus 53 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~ 132 (373)
T 1hz4_A 53 IVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLP 132 (373)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTST
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCc
Confidence 44566777777788888888888888877 1223456778888888888888888888887764 2
Q ss_pred CChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCC
Q 046569 134 LNVKALFRRSQAYLKTSELEKDEADIKRALTIDPN 168 (202)
Q Consensus 134 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~ 168 (202)
....++..+|.++...|++++|...+++++.+.|.
T Consensus 133 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 133 MHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 23456677788888888888888888888877664
No 192
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.88 E-value=1.8e-08 Score=78.17 Aligned_cols=123 Identities=11% Similarity=-0.009 Sum_probs=100.1
Q ss_pred HHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC--hHHHHHHHHHHhcC
Q 046569 74 KHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLN--VKALFRRSQAYLKT 149 (202)
Q Consensus 74 ~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~g~~~~~~ 149 (202)
...+..+...|+|++|...|..++. |... +.+.+|.++++.++|++|+..+..++...+.. ..+++.+|.++..+
T Consensus 106 LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~L 184 (282)
T 4f3v_A 106 MGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANL 184 (282)
T ss_dssp HHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHC
Confidence 3567778889999999999999887 7777 99999999999999999999999887754322 45899999999999
Q ss_pred CCHHHHHHHHHHHHhcC--CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 046569 150 SELEKDEADIKRALTID--PN-NRDVKLVYMELKENQREYAKYQAEIFGSML 198 (202)
Q Consensus 150 ~~~~~A~~~~~~a~~l~--p~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f 198 (202)
|++++|+.+|++++.-. |. ...+...+..+...+.+..+ -+..|.++.
T Consensus 185 G~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~de-A~~~l~~a~ 235 (282)
T 4f3v_A 185 ALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESA-AVALLEWLQ 235 (282)
T ss_dssp TCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHH-HHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHH-HHHHHHHHH
Confidence 99999999999998654 65 56788888888777766543 333555543
No 193
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=98.88 E-value=3.5e-09 Score=77.05 Aligned_cols=70 Identities=29% Similarity=0.283 Sum_probs=52.5
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCc--ccccCCCceEEEEEEEccccCCCC---ccCCCHHHHHHHH
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEV--SELVCANSVLYYEVTLIDFTKEKP---FWKMDTHEKIEAC 70 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~i~l~~~~~~~~---~~~~~~~~~~~~a 70 (202)
+|++||+.+|..|+.|++..|.+++.+ ||..+. ++.||+++++.|.|+|..+..... .|.|+.++++..|
T Consensus 104 ~vi~G~eeaL~gMk~Ge~~~v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~~e~~~~~~mt~eErl~~A 179 (180)
T 2f4e_A 104 KELAGLAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAA 179 (180)
T ss_dssp GGGHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCBCCC---------------
T ss_pred chhHHHHHHHhCCCCCCEEEEEECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecCccccccccCCHHHHHhhc
Confidence 379999999999999999999999999 999885 568999999999999999987776 7999888887654
No 194
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.84 E-value=3.7e-08 Score=82.67 Aligned_cols=109 Identities=14% Similarity=0.140 Sum_probs=94.7
Q ss_pred HHHHHHHhHHHHH-------cCcHH-------HHHHHHHHHHH---hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhC
Q 046569 70 CERKKHDGNLLFR-------AGKYW-------RASKKYEKATN---GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELE 132 (202)
Q Consensus 70 a~~~~~~g~~~~~-------~~~~~-------~A~~~y~~al~---~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 132 (202)
...+...|..+.. .|+++ +|+..|.+|+. |....++..+|.++...|++++|...|+++++++
T Consensus 272 ~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~ 351 (530)
T 2ooe_A 272 PDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIE 351 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCcc
Confidence 4455667777765 68887 99999999995 8899999999999999999999999999999999
Q ss_pred CCCh-HHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 046569 133 PLNV-KALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYME 178 (202)
Q Consensus 133 p~~~-~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~ 178 (202)
|.++ .+|..+|.++...|++++|...|++++...|.+..+......
T Consensus 352 p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~ 398 (530)
T 2ooe_A 352 DIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAAL 398 (530)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHH
T ss_pred ccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHH
Confidence 9886 699999999999999999999999999999887655444333
No 195
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.82 E-value=2.5e-08 Score=83.42 Aligned_cols=99 Identities=9% Similarity=0.001 Sum_probs=88.0
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH----------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh-----C
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN----------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLEL-----E 132 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~----------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~ 132 (202)
..+..+...|..+...|+|++|+.+|.++|. |.....++|+|.+|..+|+|++|+..+.+|+.+ .
T Consensus 349 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG 428 (490)
T 3n71_A 349 YVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHG 428 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhC
Confidence 4667778899999999999999999999998 788889999999999999999999999999975 5
Q ss_pred CCCh---HHHHHHHHHHhcCCCHHHHHHHHHHHHhcC
Q 046569 133 PLNV---KALFRRSQAYLKTSELEKDEADIKRALTID 166 (202)
Q Consensus 133 p~~~---~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~ 166 (202)
|++| ...-+++.++..++.+.+|...|+++.+-.
T Consensus 429 ~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 429 PSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6664 456789999999999999999999986644
No 196
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.79 E-value=6.4e-08 Score=64.34 Aligned_cols=68 Identities=15% Similarity=0.140 Sum_probs=62.9
Q ss_pred HHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 046569 120 EASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYA 187 (202)
Q Consensus 120 ~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~ 187 (202)
.|+..|+++++.+|+++.+++.+|.++...|++++|+..|++++.++|++..+...+..+.....+..
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~ 70 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRA 70 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHH
Confidence 57899999999999999999999999999999999999999999999999999999988877765554
No 197
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.79 E-value=9.5e-08 Score=64.89 Aligned_cols=102 Identities=15% Similarity=0.187 Sum_probs=88.1
Q ss_pred CcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHhhhC-C-CChHHHHHHHHHHhcCCCHHHHH
Q 046569 84 GKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSE---ASSLCTKVLELE-P-LNVKALFRRSQAYLKTSELEKDE 156 (202)
Q Consensus 84 ~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~---A~~~~~~al~~~-p-~~~~~~~~~g~~~~~~~~~~~A~ 156 (202)
.....+...|.+.+. +....+.++.|.++.+..+... ++..+..++..+ | .....+|.+|..++++|+|++|+
T Consensus 15 ~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~ 94 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 94 (126)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHH
Confidence 345566667777766 6778899999999998887776 999999999987 5 57889999999999999999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 046569 157 ADIKRALTIDPNNRDVKLVYMELKENQRE 185 (202)
Q Consensus 157 ~~~~~a~~l~p~~~~~~~~l~~~~~~~~~ 185 (202)
.+++.+++.+|+|..+..+...+..++.+
T Consensus 95 ~~~~~lL~~eP~n~QA~~Lk~~i~~~i~k 123 (126)
T 1nzn_A 95 KYVRGLLQTEPQNNQAKELERLIDKAMKK 123 (126)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999887754
No 198
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.76 E-value=3.3e-07 Score=76.16 Aligned_cols=104 Identities=14% Similarity=-0.060 Sum_probs=50.5
Q ss_pred HHHHHhHHHHH----cCcHHHHHHHHHHHHHhHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHhhhCCCChHHHHHHH
Q 046569 72 RKKHDGNLLFR----AGKYWRASKKYEKATNGLRLSCYLNNAACKLK----LEDYSEASSLCTKVLELEPLNVKALFRRS 143 (202)
Q Consensus 72 ~~~~~g~~~~~----~~~~~~A~~~y~~al~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~g 143 (202)
.+...|..++. .+++++|+..|.++++...+.+++++|.+|.. .+++++|+.+|+++.+. .++.+++.+|
T Consensus 77 a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg 154 (490)
T 2xm6_A 77 AEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKGLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMG 154 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHH
Confidence 33444444444 45555555555555544444455555555544 44555555555555443 2445555555
Q ss_pred HHHhc----CCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 046569 144 QAYLK----TSELEKDEADIKRALTIDPNNRDVKLVYMEL 179 (202)
Q Consensus 144 ~~~~~----~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~ 179 (202)
.+|.. .+++++|+..|+++.+. .++.+...+..+
T Consensus 155 ~~y~~g~g~~~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~ 192 (490)
T 2xm6_A 155 DAYFEGDGVTRDYVMAREWYSKAAEQ--GNVWSCNQLGYM 192 (490)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHH
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHH
Confidence 55544 44555555555555443 234444444443
No 199
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.75 E-value=1.8e-07 Score=74.63 Aligned_cols=120 Identities=10% Similarity=0.009 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--h-----HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC--
Q 046569 65 EKIEACERKKHDGNLLFRAGKYWRASKKYEKATN--G-----LRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLN-- 135 (202)
Q Consensus 65 ~~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-- 135 (202)
.....+......|..++..|++++|+..+.+++. + ....++.++|.++...|++++|+..+.+++.+.|..
T Consensus 9 ~~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 88 (373)
T 1hz4_A 9 EDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDV 88 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCc
Confidence 3344466777889999999999999999999998 2 234478999999999999999999999999886643
Q ss_pred ----hHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC--------CCHHHHHHHHHHHHHHH
Q 046569 136 ----VKALFRRSQAYLKTSELEKDEADIKRALTIDP--------NNRDVKLVYMELKENQR 184 (202)
Q Consensus 136 ----~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p--------~~~~~~~~l~~~~~~~~ 184 (202)
..++..+|.++...|++++|...+++++.+.+ ....+...+..+.....
T Consensus 89 ~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g 149 (373)
T 1hz4_A 89 WHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWA 149 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhc
Confidence 24478899999999999999999999999863 22344555555544443
No 200
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=98.69 E-value=7.9e-08 Score=68.93 Aligned_cols=64 Identities=17% Similarity=0.154 Sum_probs=56.1
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCcccccCCCceEEEEEEEccccCCCCccCCCHHHH
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSELVCANSVLYYEVTLIDFTKEKPFWKMDTHEK 66 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~ 66 (202)
+|++||+.+|..|+.|++..|.+++.+ ||..+..+.|||++++.|+|+|.++.+. .+..+..+.
T Consensus 89 ~vI~G~eeaL~gMk~Ge~~~~~Ip~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~~~--~~~~~~~e~ 153 (167)
T 1jvw_A 89 EVIKGWTEALQLMREGDRWRLFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKDG--GKGRTAEEV 153 (167)
T ss_dssp GSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEGGG--CCSCBHHHH
T ss_pred chhHHHHHHHcCCCCCCEEEEEECchhhCCCCCCCCCcCCCCeEEEEEEEEEEEcC--CCCCCHHHH
Confidence 489999999999999999999999999 9999988899999999999999999743 344555554
No 201
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=98.67 E-value=3.9e-08 Score=68.92 Aligned_cols=53 Identities=26% Similarity=0.426 Sum_probs=50.3
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCcccccCCCceEEEEEEEcccc
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSELVCANSVLYYEVTLIDFT 53 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~~~ 53 (202)
+|++||+.++..|+.||+..+.+++.+ ||..+.++.||+++++.|+|+|.++.
T Consensus 89 ~~i~G~e~~l~gm~~Ge~~~v~ipp~~aYG~~g~~~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 89 QVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp SSCHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred cccHHHHHHHhCCCCCCEEEEEEChHHCcCCCCCCCCcCCCCeEEEEEEEEEec
Confidence 479999999999999999999999999 99999889999999999999999874
No 202
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.64 E-value=4.4e-07 Score=75.01 Aligned_cols=105 Identities=12% Similarity=0.026 Sum_probs=66.1
Q ss_pred HHHHHhHHHHHcC---cHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHhhhCCCChHHHHHH
Q 046569 72 RKKHDGNLLFRAG---KYWRASKKYEKATN--GLRLSCYLNNAACKLKL----EDYSEASSLCTKVLELEPLNVKALFRR 142 (202)
Q Consensus 72 ~~~~~g~~~~~~~---~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~----~~~~~A~~~~~~al~~~p~~~~~~~~~ 142 (202)
.+...|..+...| ++.+|+..|.++++ +.....++++|.+|... +++++|+.+|.++. |.++.+++++
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~L 254 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSL 254 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHH
Confidence 3455666666667 77777777777776 44444456666666544 56667777776666 6666666666
Q ss_pred HHH-H--hcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 046569 143 SQA-Y--LKTSELEKDEADIKRALTIDPNNRDVKLVYMELKE 181 (202)
Q Consensus 143 g~~-~--~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 181 (202)
|.+ + ...+++++|+..|+++.+. .++.+...+..+..
T Consensus 255 g~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~ 294 (452)
T 3e4b_A 255 AQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY 294 (452)
T ss_dssp HHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
Confidence 666 3 4566666666666666643 35556655555543
No 203
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=98.62 E-value=6.8e-08 Score=66.86 Aligned_cols=53 Identities=23% Similarity=0.408 Sum_probs=49.6
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCcccccCCCceEEEEEEEcccc
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSELVCANSVLYYEVTLIDFT 53 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~~~ 53 (202)
+|++||+.++..|+.|++..+.+++.+ ||..+.++.||+++++.|+|+|.++.
T Consensus 80 ~~i~G~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 80 ITLWGMELGLLSMRRGELARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp CCCHHHHHHHHTCEETCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred chhHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCcCcCCeEEEEEEEEEEe
Confidence 479999999999999999999999999 99999888899999999999998874
No 204
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=98.62 E-value=7.2e-08 Score=65.31 Aligned_cols=52 Identities=31% Similarity=0.498 Sum_probs=48.3
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCccc-ccCCCceEEEEEEEccc
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSE-LVCANSVLYYEVTLIDF 52 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~i~l~~~ 52 (202)
++++||+.++..|+.|++..+.+++.+ ||..+... .||+++++.|+|+|.++
T Consensus 65 ~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 65 KVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp SSCHHHHHHHTTCCTTCEEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEE
T ss_pred ChhHHHHHHHhCCCCCCEEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEe
Confidence 478999999999999999999999999 99999765 79999999999999876
No 205
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=98.62 E-value=6.6e-08 Score=66.40 Aligned_cols=53 Identities=26% Similarity=0.426 Sum_probs=50.2
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCcccccCCCceEEEEEEEcccc
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSELVCANSVLYYEVTLIDFT 53 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~~~ 53 (202)
+|++||+.++..|+.|++..+.+++.+ ||..+..+.||+++++.|+|+|.++.
T Consensus 73 ~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~i~ 126 (128)
T 3o5q_A 73 QVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK 126 (128)
T ss_dssp SSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred CccHHHHHHHhcCCCCCEEEEEEChHHcCCCCCCCCCcCCCCEEEEEEEEEEec
Confidence 579999999999999999999999999 99999888999999999999999874
No 206
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=98.62 E-value=7.9e-08 Score=66.07 Aligned_cols=54 Identities=30% Similarity=0.512 Sum_probs=50.4
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCcccccCCCceEEEEEEEccccC
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSELVCANSVLYYEVTLIDFTK 54 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~~~~ 54 (202)
+|++||+.++..|+.|++..+.+++.+ ||..+.++.||+++++.|+|+|.++..
T Consensus 73 ~~i~g~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 73 EVIKGWDICVSSMRKNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp SSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred CcCHHHHHHHhCCCCCCEEEEEEChHHcCCCCCCCCCcCCCCeEEEEEEEEEEec
Confidence 479999999999999999999999999 999998788999999999999998864
No 207
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=98.61 E-value=8.4e-08 Score=63.71 Aligned_cols=52 Identities=23% Similarity=0.432 Sum_probs=48.7
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCcccccCCCceEEEEEEEccc
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSELVCANSVLYYEVTLIDF 52 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~~ 52 (202)
++++||+.++..|+.|++..+.+++.+ ||..+.+..||+++++.|+|++.++
T Consensus 54 ~~i~g~~~~l~gm~~Ge~~~~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v 106 (107)
T 2ppn_A 54 EVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKL 106 (107)
T ss_dssp CSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred ChHHHHHHHHhCCCCCCEEEEEECHHHccCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 479999999999999999999999999 9999987889999999999999876
No 208
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.61 E-value=5.7e-07 Score=74.33 Aligned_cols=91 Identities=15% Similarity=-0.003 Sum_probs=63.8
Q ss_pred HHHHHHhHHH---HHcCcHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CHHHHHHHHHHHhhhCCCChHHHHHH
Q 046569 71 ERKKHDGNLL---FRAGKYWRASKKYEKATNGLRLSCYLNNAACKLKLE-----DYSEASSLCTKVLELEPLNVKALFRR 142 (202)
Q Consensus 71 ~~~~~~g~~~---~~~~~~~~A~~~y~~al~~~~~~~~~~~a~~~~~~~-----~~~~A~~~~~~al~~~p~~~~~~~~~ 142 (202)
..+...|..+ ...+++++|+..|.++++...+.+++++|.+|. .| ++++|+.+|.++. +.++.+++++
T Consensus 249 ~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~L 324 (452)
T 3e4b_A 249 ASWVSLAQLLYDFPELGDVEQMMKYLDNGRAADQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYL 324 (452)
T ss_dssp HHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHH
Confidence 3445566652 356777777777777777667777777777776 44 7777777777777 7777777777
Q ss_pred HHHHhc----CCCHHHHHHHHHHHHhc
Q 046569 143 SQAYLK----TSELEKDEADIKRALTI 165 (202)
Q Consensus 143 g~~~~~----~~~~~~A~~~~~~a~~l 165 (202)
|.+|.. ..++++|+..|+++.+.
T Consensus 325 g~~y~~G~g~~~d~~~A~~~~~~Aa~~ 351 (452)
T 3e4b_A 325 GQIYRRGYLGKVYPQKALDHLLTAARN 351 (452)
T ss_dssp HHHHHTTTTSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHCCCCCCcCHHHHHHHHHHHHhh
Confidence 777766 34777777777777664
No 209
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.60 E-value=4e-07 Score=73.83 Aligned_cols=100 Identities=21% Similarity=0.180 Sum_probs=75.0
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH------------------------------------------------h
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN------------------------------------------------G 99 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~------------------------------------------------~ 99 (202)
.....+...|..++..|+|++|++.|.+++. .
T Consensus 53 ~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 132 (434)
T 4b4t_Q 53 EQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVF 132 (434)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCS
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccH
Confidence 3445567778888888888888887777665 2
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhC------CCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC
Q 046569 100 LRLSCYLNNAACKLKLEDYSEASSLCTKVLELE------PLNVKALFRRSQAYLKTSELEKDEADIKRALTIDP 167 (202)
Q Consensus 100 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p 167 (202)
....++.++|.+|...|+|.+|+..+.+++... +....++...|.+|..+|++++|...+++++...+
T Consensus 133 ~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 133 LKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp SHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 335577788888888888888888888887642 23366788888888888888888888888887754
No 210
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.59 E-value=4.6e-07 Score=62.70 Aligned_cols=93 Identities=15% Similarity=0.016 Sum_probs=82.3
Q ss_pred CcHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhc----CCCHHHHHHHH
Q 046569 84 GKYWRASKKYEKATNGLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLK----TSELEKDEADI 159 (202)
Q Consensus 84 ~~~~~A~~~y~~al~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~----~~~~~~A~~~~ 159 (202)
+++++|+..|.++.+..++.+. +|.+|...+..++|+.+|.++.+. .++.+++++|.+|.. .+++++|+..|
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~ 84 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMFGC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYY 84 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCHhhh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHH
Confidence 5789999999999994444455 999999999999999999999987 689999999999999 89999999999
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHH
Q 046569 160 KRALTIDPNNRDVKLVYMELKEN 182 (202)
Q Consensus 160 ~~a~~l~p~~~~~~~~l~~~~~~ 182 (202)
+++.+. .++.+...+..+...
T Consensus 85 ~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 85 SKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHcC--CCHHHHHHHHHHHHC
Confidence 999987 678888888887765
No 211
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=98.58 E-value=1.1e-07 Score=63.79 Aligned_cols=52 Identities=27% Similarity=0.406 Sum_probs=48.7
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCcccccCCCceEEEEEEEccc
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSELVCANSVLYYEVTLIDF 52 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~~ 52 (202)
++++||+.++..|+.|++..+.+++.+ ||..+....||+++++.|+++|.++
T Consensus 60 ~~i~g~e~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~Ip~~~~l~f~vel~~i 112 (113)
T 1yat_A 60 QVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRGFPGLIPPNSTLVFDVELLKV 112 (113)
T ss_dssp SSCHHHHHHGGGCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred CccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 478999999999999999999999999 9999987889999999999999876
No 212
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.58 E-value=1.1e-06 Score=70.40 Aligned_cols=101 Identities=12% Similarity=0.015 Sum_probs=76.0
Q ss_pred HHHHHHHhHHHHHcC---cHHHHHHHHHHHHH--hHHHHHHHH-------------------------------------
Q 046569 70 CERKKHDGNLLFRAG---KYWRASKKYEKATN--GLRLSCYLN------------------------------------- 107 (202)
Q Consensus 70 a~~~~~~g~~~~~~~---~~~~A~~~y~~al~--~~~~~~~~~------------------------------------- 107 (202)
|..++-+|..++..+ .+.+|+.+|++|++ |.++.++-.
T Consensus 196 Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~ 275 (372)
T 3ly7_A 196 LLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNN 275 (372)
T ss_dssp GHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCc
Confidence 445566777776654 45889999999998 444444443
Q ss_pred -------HHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHH
Q 046569 108 -------NAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRD 171 (202)
Q Consensus 108 -------~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~ 171 (202)
++..++..|++++|+..+++++.++| +..+|..+|.++...|++++|.+.|.+|+.++|..+.
T Consensus 276 ~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 276 LSIIYQIKAVSALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh
Confidence 44445557888888888888888886 4677788888888888888888888888888887653
No 213
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=98.57 E-value=1.2e-07 Score=64.07 Aligned_cols=53 Identities=26% Similarity=0.286 Sum_probs=49.3
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCcccccCCCceEEEEEEEcccc
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSELVCANSVLYYEVTLIDFT 53 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~~~ 53 (202)
++++||+.++..|+.|++..+.+++.+ ||..+.++.||+++++.|.|+|.++.
T Consensus 64 ~~i~g~e~~l~gm~~Ge~~~~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 64 DVIQALDLSVPLMDVGETAMVTADSKYCYGPQGRSPYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp CSCHHHHHHGGGSCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred ChhHHHHHHHhCCCCCCEEEEEEChHHccCCCCCCCccCCCCeEEEEEEEEEec
Confidence 478999999999999999999999999 99999888899999999999998763
No 214
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=98.57 E-value=1.2e-07 Score=65.30 Aligned_cols=52 Identities=23% Similarity=0.346 Sum_probs=48.4
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCcccccCCCceEEEEEEEccc
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSELVCANSVLYYEVTLIDF 52 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~~ 52 (202)
+|++||+.++..|+.|++..+.+++.+ ||..+.+..||+++++.|+|+|.++
T Consensus 78 ~vi~G~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 78 EVIKGWDQGVATMTLGEKALFTIPYQLAYGERGYPPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp TSCHHHHHHHHHSCTTEEEEEEECTTTSTTTTCCSTTSCSSCCEEEEEEEEEC
T ss_pred CccHHHHHHHhCCCCCCEEEEEECcHHHCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 479999999999999999999999999 9999987889999999999998764
No 215
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=98.55 E-value=1.2e-07 Score=67.21 Aligned_cols=54 Identities=26% Similarity=0.284 Sum_probs=50.3
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCC-cccccCCCceEEEEEEEccccC
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHE-VSELVCANSVLYYEVTLIDFTK 54 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~i~l~~~~~ 54 (202)
+|++||+.+|..|+.|++..+.+++.+ ||..+ ....||+++++.|+|+|.++..
T Consensus 94 ~vi~G~eeaL~gMk~Ge~~~v~IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~ 149 (157)
T 2jwx_A 94 DVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVD 149 (157)
T ss_dssp SSCHHHHHHTTTSCTTCEEEEEECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEE
T ss_pred ChhHHHHHHHcCCCCCCEEEEEECchhcCCcccccCCCcCCCCeEEEEEEEEEEEc
Confidence 489999999999999999999999999 99999 7778999999999999998864
No 216
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=98.54 E-value=1.3e-07 Score=65.36 Aligned_cols=52 Identities=23% Similarity=0.349 Sum_probs=48.5
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCcccccCCCceEEEEEEEccc
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSELVCANSVLYYEVTLIDF 52 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~~ 52 (202)
+|++||+.++..|+.||+..+.+++.+ ||..+....|||++++.|+|+|.++
T Consensus 81 ~vi~G~eeaL~gmk~Ge~~~v~ip~~~aYG~~~~~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 81 MVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp SSCHHHHHHSTTCBTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred ChhHHHHHHHcCCCCCCEEEEEECcHHhCCCCCCCCCCCCCCeEEEEEEEEEC
Confidence 479999999999999999999999999 9999987889999999999998764
No 217
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.52 E-value=1e-07 Score=62.70 Aligned_cols=54 Identities=19% Similarity=0.358 Sum_probs=50.4
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCcccccCCCceEEEEEEEccccC
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSELVCANSVLYYEVTLIDFTK 54 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~~~~ 54 (202)
++++||+.++..|+.|++..+.+++.+ ||..+....||+++++.|.|++.++..
T Consensus 44 ~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~~ 98 (102)
T 2pbc_A 44 QVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKIER 98 (102)
T ss_dssp SSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEGG
T ss_pred CccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCcCcCCeEEEEEEEEEecc
Confidence 478999999999999999999999999 999998778999999999999998864
No 218
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=98.52 E-value=1.7e-07 Score=64.05 Aligned_cols=53 Identities=13% Similarity=0.251 Sum_probs=49.1
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCcccccCCCceEEEEEEEccccC
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSELVCANSVLYYEVTLIDFTK 54 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~~~~ 54 (202)
++++||+.++..|+.|++..+.+++.+ ||..+.. .||+++++.|+|+|.++..
T Consensus 70 ~~i~G~e~~l~gm~~Ge~~~~~ip~~~aYG~~g~~-~Ip~~~~l~f~vel~~i~~ 123 (125)
T 4dip_A 70 EALKGWDQGLKGMCVGEKRKLIIPPALGYGKEGKG-KIPPESTLIFNIDLLEIRN 123 (125)
T ss_dssp SSCHHHHHHSTTCCTTCEEEEEECGGGTTTTTCBT-TBCTTCCEEEEEEEEEEEC
T ss_pred ChhHHHHHHHhCCCCCCEEEEEEChHHhcCCCCCC-CCCCCCeEEEEEEEEEEEc
Confidence 479999999999999999999999999 9999955 8999999999999998754
No 219
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=98.50 E-value=2.3e-07 Score=64.22 Aligned_cols=55 Identities=29% Similarity=0.445 Sum_probs=51.0
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCcccccCCCceEEEEEEEccccCC
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSELVCANSVLYYEVTLIDFTKE 55 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~~~~~ 55 (202)
+|++||+.++..|+.|++..+.+++.+ ||..+.++.||+++++.|.+++..+...
T Consensus 68 ~vi~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~~~ 123 (135)
T 1r9h_A 68 NVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVELFEWSAE 123 (135)
T ss_dssp SSCHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-
T ss_pred CccHHHHHHHhcCCCCCEEEEEEChHHcCCCCCCCCCcCcCCcEEEEEEEEEeecC
Confidence 479999999999999999999999999 9999988899999999999999998653
No 220
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.48 E-value=1.8e-06 Score=66.83 Aligned_cols=84 Identities=13% Similarity=0.063 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHH--hH--HHHHHHHHHHHHHHh-----cCHHHHHHHHHHHhhhCCCC-hHHHHHHHHHHhc-CCCHHH
Q 046569 86 YWRASKKYEKATN--GL--RLSCYLNNAACKLKL-----EDYSEASSLCTKVLELEPLN-VKALFRRSQAYLK-TSELEK 154 (202)
Q Consensus 86 ~~~A~~~y~~al~--~~--~~~~~~~~a~~~~~~-----~~~~~A~~~~~~al~~~p~~-~~~~~~~g~~~~~-~~~~~~ 154 (202)
...|...+++|++ |. ...+|..+|..|... |+.++|..+|+++++++|+. +.+++..|..+.. .+++++
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~ 258 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAG 258 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHH
Confidence 5678888888888 65 677999999999996 99999999999999999975 9999999999988 499999
Q ss_pred HHHHHHHHHhcCCCC
Q 046569 155 DEADIKRALTIDPNN 169 (202)
Q Consensus 155 A~~~~~~a~~l~p~~ 169 (202)
|...+++|+..+|..
T Consensus 259 a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 259 FDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHcCCCCC
Confidence 999999999998873
No 221
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.45 E-value=4.3e-06 Score=56.97 Aligned_cols=86 Identities=13% Similarity=0.129 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHHhcCH---HHHHHHHHHHhhhCCC-ChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHH
Q 046569 100 LRLSCYLNNAACKLKLEDY---SEASSLCTKVLELEPL-NVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLV 175 (202)
Q Consensus 100 ~~~~~~~~~a~~~~~~~~~---~~A~~~~~~al~~~p~-~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~ 175 (202)
-.+...++.|-++.+..+. .+++..+..+++.+|. ....+|.+|..++++|+|++|+.+.+.+++.+|+|..+...
T Consensus 38 vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~L 117 (134)
T 3o48_A 38 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 117 (134)
T ss_dssp SCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred CChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHH
Confidence 3567778888888777654 4789999999998884 58899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 046569 176 YMELKENQRE 185 (202)
Q Consensus 176 l~~~~~~~~~ 185 (202)
...+.+++.+
T Consensus 118 k~~Ie~ki~k 127 (134)
T 3o48_A 118 KSMVEDKIQK 127 (134)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999888875
No 222
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.44 E-value=1.4e-07 Score=65.34 Aligned_cols=59 Identities=24% Similarity=0.242 Sum_probs=52.8
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCC-cccccCCCceEEEEEEEccccCCCCcc
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHE-VSELVCANSVLYYEVTLIDFTKEKPFW 59 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~i~l~~~~~~~~~~ 59 (202)
++++||+.++..|+.|++..+.+++.+ ||..+ ....||+++++.|.|+|..+.......
T Consensus 68 ~~i~G~e~~L~gm~~Ge~~~v~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~~~~e 128 (135)
T 2d9f_A 68 DVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDRPDLE 128 (135)
T ss_dssp CSCTTTTTTGGGSCTTCEEEEEECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESSCSSS
T ss_pred ChhHHHHHHHhCCCCCCEEEEEEChhHccCcCCcCCCccCCCCeEEEEEEEEEeecCCchh
Confidence 478999999999999999999999999 99998 777899999999999999998654433
No 223
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.43 E-value=2.8e-06 Score=66.78 Aligned_cols=99 Identities=14% Similarity=0.058 Sum_probs=81.8
Q ss_pred HHhHHHHHcC--cHHHHHHHHHHHHH--hH--HHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh----------CCCChHH
Q 046569 75 HDGNLLFRAG--KYWRASKKYEKATN--GL--RLSCYLNNAACKLKLEDYSEASSLCTKVLEL----------EPLNVKA 138 (202)
Q Consensus 75 ~~g~~~~~~~--~~~~A~~~y~~al~--~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~----------~p~~~~~ 138 (202)
.+|.+.+..| ++.+|...|+++.. |. ....+++ ++..+|+|++|...++.+++. +|+++.+
T Consensus 181 aea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~ 257 (310)
T 3mv2_B 181 AESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTF 257 (310)
T ss_dssp HHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHH
T ss_pred HHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHH
Confidence 3443345445 99999999999877 54 3455555 899999999999999988876 5889999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 046569 139 LFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYME 178 (202)
Q Consensus 139 ~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~ 178 (202)
+.+++.+...+|+ +|.+.++++..++|+++.+.....+
T Consensus 258 LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i~d~~~k 295 (310)
T 3mv2_B 258 LANQITLALMQGL--DTEDLTNQLVKLDHEHAFIKHHQEI 295 (310)
T ss_dssp HHHHHHHHHHTTC--TTHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCh--HHHHHHHHHHHhCCCChHHHHHHHH
Confidence 9999999999998 8999999999999999988776543
No 224
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.42 E-value=7.9e-06 Score=56.38 Aligned_cols=86 Identities=13% Similarity=0.129 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHhcCH---HHHHHHHHHHhhhCCC-ChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHH
Q 046569 100 LRLSCYLNNAACKLKLEDY---SEASSLCTKVLELEPL-NVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLV 175 (202)
Q Consensus 100 ~~~~~~~~~a~~~~~~~~~---~~A~~~~~~al~~~p~-~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~ 175 (202)
..+...++.|-++.+..+. .+++..++..+..+|. ....+|.+|..++++|+|++|+.+++..++.+|+|..+..+
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~L 116 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 116 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 4567778888888877655 4789999999998884 57899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 046569 176 YMELKENQRE 185 (202)
Q Consensus 176 l~~~~~~~~~ 185 (202)
...+.+++.+
T Consensus 117 k~~Ie~~i~k 126 (144)
T 1y8m_A 117 KSMVEDKIQK 126 (144)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9988887754
No 225
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.39 E-value=4e-06 Score=77.17 Aligned_cols=106 Identities=15% Similarity=0.117 Sum_probs=90.0
Q ss_pred HHHHHHhHHHHHcCcHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCC-----------------
Q 046569 71 ERKKHDGNLLFRAGKYWRASKKYEKATNGLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEP----------------- 133 (202)
Q Consensus 71 ~~~~~~g~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p----------------- 133 (202)
..+...|+.++..|+|++|+..|.++ .-|..+|.+|.++|++++|++.+.+|....+
T Consensus 1196 ad~~~iGd~le~eg~YeeA~~~Y~kA------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA 1269 (1630)
T 1xi4_A 1196 AHIQQVGDRCYDEKMYDAAKLLYNNV------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLA 1269 (1630)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhh------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHH
Confidence 35667999999999999999999995 5899999999999999999999999865543
Q ss_pred --------CChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 046569 134 --------LNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKEN 182 (202)
Q Consensus 134 --------~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 182 (202)
.++..+..++..|...|.|++|+..|++++.++|.+......+..+...
T Consensus 1270 ~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaK 1326 (1630)
T 1xi4_A 1270 QMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSK 1326 (1630)
T ss_pred HHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHh
Confidence 2455666788899999999999999999999999988887777665443
No 226
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.38 E-value=6e-06 Score=64.86 Aligned_cols=116 Identities=11% Similarity=-0.048 Sum_probs=88.7
Q ss_pred HHHHhHHHHHcCcHHHHHHHHHHHHH--h--HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCC----ChHHHHHH--
Q 046569 73 KKHDGNLLFRAGKYWRASKKYEKATN--G--LRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPL----NVKALFRR-- 142 (202)
Q Consensus 73 ~~~~g~~~~~~~~~~~A~~~y~~al~--~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~----~~~~~~~~-- 142 (202)
+.-.|..+...|++++|+..+.++|. + ....++...+.+++++|+.+.|.+.+++....+|+ +......+
T Consensus 103 ~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Lae 182 (310)
T 3mv2_B 103 LYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAE 182 (310)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHH
Confidence 45788999999999999999999998 3 79999999999999999999999999999999993 23333444
Q ss_pred HHHHhcCC--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 046569 143 SQAYLKTS--ELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKY 189 (202)
Q Consensus 143 g~~~~~~~--~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~ 189 (202)
|.+....| ++.+|...|+.+.+..|+.......++ +...+....+.
T Consensus 183 a~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln-~~~~~g~~~eA 230 (310)
T 3mv2_B 183 SYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN-LHLQQRNIAEA 230 (310)
T ss_dssp HHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH-HHHHHTCHHHH
T ss_pred HHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH-HHHHcCCHHHH
Confidence 43355555 999999999999888887333333333 44444444433
No 227
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.37 E-value=6.1e-06 Score=57.90 Aligned_cols=75 Identities=16% Similarity=0.083 Sum_probs=65.3
Q ss_pred HHHHHHHhHHHHHcC---cHHHHHHHHHHHHH---h-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHH
Q 046569 70 CERKKHDGNLLFRAG---KYWRASKKYEKATN---G-LRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRR 142 (202)
Q Consensus 70 a~~~~~~g~~~~~~~---~~~~A~~~y~~al~---~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 142 (202)
.....+.|..+.+.. +.++++..++..++ | ...++++++|..|+++++|++|+.+++.+|+++|+|..+...+
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk 111 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELE 111 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 455667788888877 77899999999999 3 5789999999999999999999999999999999998887655
Q ss_pred HH
Q 046569 143 SQ 144 (202)
Q Consensus 143 g~ 144 (202)
-.
T Consensus 112 ~~ 113 (152)
T 1pc2_A 112 RL 113 (152)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 228
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.37 E-value=4.5e-06 Score=67.55 Aligned_cols=97 Identities=6% Similarity=-0.050 Sum_probs=85.2
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCC---CC---
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEP---LN--- 135 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p---~~--- 135 (202)
+......|..++..|+|.+|+..+.+++. +....++.++|.+|..+|+|.+|...+++++...+ ..
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 214 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQT 214 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHH
Confidence 45667889999999999999999999987 77888999999999999999999999999997743 22
Q ss_pred -hHHHHHHHHHHhcCCCHHHHHHHHHHHHhcC
Q 046569 136 -VKALFRRSQAYLKTSELEKDEADIKRALTID 166 (202)
Q Consensus 136 -~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~ 166 (202)
...+...|..+...++|++|..+|..++...
T Consensus 215 ~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~ 246 (434)
T 4b4t_Q 215 VAELDLMSGILHCEDKDYKTAFSYFFESFESY 246 (434)
T ss_dssp HHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 3567788999999999999999999998753
No 229
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.36 E-value=3.8e-06 Score=77.25 Aligned_cols=89 Identities=13% Similarity=-0.002 Sum_probs=76.3
Q ss_pred HHhHHHHHcCcHHHHHHHHHHHHH------------------------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 046569 75 HDGNLLFRAGKYWRASKKYEKATN------------------------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLE 130 (202)
Q Consensus 75 ~~g~~~~~~~~~~~A~~~y~~al~------------------------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 130 (202)
+.|..+...|.|++|..+|+++-. ...+.+|+++|.++...|++++|++.|.++
T Consensus 1054 eIA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA-- 1131 (1630)
T 1xi4_A 1054 DIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-- 1131 (1630)
T ss_pred HHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc--
Confidence 347777777777777777666533 566889999999999999999999999776
Q ss_pred hCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCC
Q 046569 131 LEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPN 168 (202)
Q Consensus 131 ~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~ 168 (202)
+++.+|.+.|.++...|++++|++.|+++.+..++
T Consensus 1132 ---dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1132 ---DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred ---CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 89999999999999999999999999999998855
No 230
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.35 E-value=5e-06 Score=53.60 Aligned_cols=68 Identities=15% Similarity=0.021 Sum_probs=60.3
Q ss_pred HHHHHHHhHHHHHcCc---HHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChH
Q 046569 70 CERKKHDGNLLFRAGK---YWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVK 137 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~---~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~ 137 (202)
+..+...|..++..++ ..+|...+.+++. |.++.++..+|..++..|+|++|+..++++++.+|..+.
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 4566778888876555 7999999999999 999999999999999999999999999999999998543
No 231
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.35 E-value=1.7e-06 Score=71.02 Aligned_cols=105 Identities=15% Similarity=0.102 Sum_probs=61.0
Q ss_pred HHHHHhHHHHHcCcHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh--------------------
Q 046569 72 RKKHDGNLLFRAGKYWRASKKYEKATNGLRLSCYLNNAACKLKLEDYSEASSLCTKVLEL-------------------- 131 (202)
Q Consensus 72 ~~~~~g~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-------------------- 131 (202)
.+...|+.++..|+|++|+..|.++ +-|..+|.|+.++|+|++|++.+.++...
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a------~n~~~LA~~L~~Lg~yq~AVea~~KA~~~~~Wk~v~~aCv~~~ef~lA~ 197 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQ 197 (449)
T ss_dssp -------------CTTTHHHHHHHT------TCHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh------hhHHHHHHHHHHhccHHHHHHHHHHcCCchhHHHHHHHHHHcCcHHHHH
Confidence 4555566666666666666666553 35555555666666666665555555211
Q ss_pred ------CCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 046569 132 ------EPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQ 183 (202)
Q Consensus 132 ------~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 183 (202)
. .++.-...+...|...|.+++|+..+++++.++|....+...+..+...-
T Consensus 198 ~~~l~L~-~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky 254 (449)
T 1b89_A 198 MCGLHIV-VHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKF 254 (449)
T ss_dssp HTTTTTT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTT
T ss_pred HHHHHHH-hCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhc
Confidence 1 22333444667899999999999999999999999988888887665443
No 232
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=98.34 E-value=8.4e-07 Score=68.90 Aligned_cols=59 Identities=34% Similarity=0.508 Sum_probs=51.9
Q ss_pred cchHHHHHHhccccccEEEEEecccc-cccCCccc-ccCCCceEEEEEEEccccCCCCccC
Q 046569 2 VNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSE-LVCANSVLYYEVTLIDFTKEKPFWK 60 (202)
Q Consensus 2 v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~i~l~~~~~~~~~~~ 60 (202)
+++||+.+|..|+.||+..+.+++.+ ||..+.+. .||+++++.|.|+|.++......|+
T Consensus 220 ~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~~~~IP~~~~l~f~V~L~~i~~~~~~W~ 280 (280)
T 1q1c_A 220 LPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWE 280 (280)
T ss_dssp CCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEECCCC---
T ss_pred cchhHHHHHhCCCCCcEEEEEEChhHcCCcCCCccCccCCCCeEEEEEEEEEEeCCCCCCC
Confidence 69999999999999999999999999 99988665 5999999999999999988777774
No 233
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.33 E-value=4.2e-06 Score=68.95 Aligned_cols=72 Identities=11% Similarity=-0.056 Sum_probs=64.5
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH----------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh-----C
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN----------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLEL-----E 132 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~----------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~ 132 (202)
..+..+...|..+...|+|++|+.+|+++|. |.....++|+|.+|..+|+|++|+..+.+|+++ .
T Consensus 338 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG 417 (433)
T 3qww_A 338 YMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHG 417 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcC
Confidence 4566778899999999999999999999998 888889999999999999999999999999975 6
Q ss_pred CCChHHH
Q 046569 133 PLNVKAL 139 (202)
Q Consensus 133 p~~~~~~ 139 (202)
|++|..-
T Consensus 418 ~~Hp~~~ 424 (433)
T 3qww_A 418 KDHPYIS 424 (433)
T ss_dssp TTCHHHH
T ss_pred CCChHHH
Confidence 7777643
No 234
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=98.23 E-value=1.4e-06 Score=62.07 Aligned_cols=57 Identities=12% Similarity=0.042 Sum_probs=44.9
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCC--------cc-----------------------------cccCCCce
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHE--------VS-----------------------------ELVCANSV 42 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~--------~~-----------------------------~~~~~~~~ 42 (202)
+||+||+.++.+|+.||++.|.|+|.+ ||... .. ..++++++
T Consensus 67 ~vI~Gwd~gl~~M~~Ge~~~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~ 146 (165)
T 2lkn_A 67 FKLPVWETIVCTMREGEIAQFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQP 146 (165)
T ss_dssp CSCSHHHHHHTTCCTTCEEEEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCC
T ss_pred CccHHHHHHHhcCccCceEEEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCC
Confidence 589999999999999999999999999 98210 00 11345578
Q ss_pred EEEEEEEccccCCCC
Q 046569 43 LYYEVTLIDFTKEKP 57 (202)
Q Consensus 43 ~~~~i~l~~~~~~~~ 57 (202)
|.|+|+|.++.....
T Consensus 147 L~FeIELl~Ve~P~e 161 (165)
T 2lkn_A 147 LIFHMEMLKVESPGT 161 (165)
T ss_dssp CEEEEEEEEEECTTT
T ss_pred eEEEEEEEEEcCCcc
Confidence 999999999976443
No 235
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=98.22 E-value=1.9e-06 Score=69.22 Aligned_cols=54 Identities=22% Similarity=0.375 Sum_probs=49.2
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCccc-----ccCCCceEEEEEEEccccC
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSE-----LVCANSVLYYEVTLIDFTK 54 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~i~l~~~~~ 54 (202)
+|+.||+.++.+|+.||++.+.++|.+ ||..|.+. .||+++.+.|+++|.++..
T Consensus 177 ~v~~gl~~~l~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~ 236 (356)
T 3jxv_A 177 HLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKT 236 (356)
T ss_dssp SSSHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEEC
T ss_pred CcchHHHHHHhhCCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEec
Confidence 478999999999999999999999999 99998554 6999999999999998864
No 236
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.22 E-value=4.9e-06 Score=68.43 Aligned_cols=79 Identities=6% Similarity=-0.076 Sum_probs=67.0
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH----------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh-----C
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN----------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLEL-----E 132 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~----------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~ 132 (202)
..+..+...|..+...|+|++|+.+|.++|. |.....++|+|.+|..+|++++|+..+.+|+++ .
T Consensus 327 ~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG 406 (429)
T 3qwp_A 327 YQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHG 406 (429)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcC
Confidence 4566777899999999999999999999998 888889999999999999999999999999975 6
Q ss_pred CCChHH---HHHHHHHH
Q 046569 133 PLNVKA---LFRRSQAY 146 (202)
Q Consensus 133 p~~~~~---~~~~g~~~ 146 (202)
|++|.. +.+++.+.
T Consensus 407 ~~Hp~~~~~~~~l~~~~ 423 (429)
T 3qwp_A 407 REHSLIEDLILLLEECD 423 (429)
T ss_dssp TTSHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHH
Confidence 777654 34455544
No 237
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=98.22 E-value=1.8e-06 Score=59.23 Aligned_cols=52 Identities=23% Similarity=0.345 Sum_probs=47.2
Q ss_pred CcchHHHHHHhc------cccccEEEEEecccc-cccCCcc-----cccCCCceEEEEEEEccc
Q 046569 1 NVNEGLERAIMT------MKKEEQATVTISAEY-LCGHEVS-----ELVCANSVLYYEVTLIDF 52 (202)
Q Consensus 1 ~v~~~~~~~~~~------m~~ge~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~i~l~~~ 52 (202)
++++||+.++.. |+.|++..+.+++.+ ||..+.. ..||+++++.|+|+|.++
T Consensus 65 ~~i~G~~~~L~G~~~~~~m~~Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 65 EVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp SSCHHHHHHHHCBTTBCCCBTTCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred CccHHHHHHhcccccccccCCCCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 478999999987 999999999999999 9998853 589999999999999875
No 238
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.18 E-value=4.2e-05 Score=59.25 Aligned_cols=84 Identities=11% Similarity=0.062 Sum_probs=69.6
Q ss_pred hHHHHHHHHHHHHHHH---h--c------CHHHHHHHHHHHhhhCCC--ChHHHHHHHHHHhcC-----CCHHHHHHHHH
Q 046569 99 GLRLSCYLNNAACKLK---L--E------DYSEASSLCTKVLELEPL--NVKALFRRSQAYLKT-----SELEKDEADIK 160 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~---~--~------~~~~A~~~~~~al~~~p~--~~~~~~~~g~~~~~~-----~~~~~A~~~~~ 160 (202)
+..+++++..|..+.. . + ....|...++++++++|+ +..+|..+|..|... |+.++|..+|+
T Consensus 149 ~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~fe 228 (301)
T 3u64_A 149 RVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFE 228 (301)
T ss_dssp GGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHH
Confidence 7778888888887754 2 2 236889999999999999 577999999999995 99999999999
Q ss_pred HHHhcCCCC-HHHHHHHHHHHHH
Q 046569 161 RALTIDPNN-RDVKLVYMELKEN 182 (202)
Q Consensus 161 ~a~~l~p~~-~~~~~~l~~~~~~ 182 (202)
+|+.++|+. ..+...++.....
T Consensus 229 rAL~LnP~~~id~~v~YA~~l~~ 251 (301)
T 3u64_A 229 HLTRYCSAHDPDHHITYADALCI 251 (301)
T ss_dssp HHHHHCCTTCSHHHHHHHHHTTT
T ss_pred HHHHhCCCCCchHHHHHHHHHHH
Confidence 999999975 7777777775433
No 239
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.17 E-value=6.9e-05 Score=53.05 Aligned_cols=109 Identities=10% Similarity=0.057 Sum_probs=85.1
Q ss_pred HHHHHHhHHHHHcCcHHHHHHHHHHHHH-----------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhC---CCC-
Q 046569 71 ERKKHDGNLLFRAGKYWRASKKYEKATN-----------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELE---PLN- 135 (202)
Q Consensus 71 ~~~~~~g~~~~~~~~~~~A~~~y~~al~-----------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~---p~~- 135 (202)
..+.+....++..+.|+.|+-....++. .....++..+|.+++..++|..|...|+++|.+. +.+
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~ 100 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTS 100 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3566778889999999999999999887 2345588999999999999999999999997652 111
Q ss_pred ---------------------hHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 046569 136 ---------------------VKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELK 180 (202)
Q Consensus 136 ---------------------~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 180 (202)
.+..|.++.||..++++++|+..++.+.. ....+.+...|+++.
T Consensus 101 s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~-k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 101 KVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPS-RQRTPKINMLLANLY 165 (167)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCG-GGCCHHHHHHHHHHC
T ss_pred CccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCc-hhcCHHHHHHHHHHh
Confidence 25789999999999999999998865322 224566777766653
No 240
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=98.13 E-value=3.9e-06 Score=65.10 Aligned_cols=54 Identities=30% Similarity=0.384 Sum_probs=50.7
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCcccccCCCceEEEEEEEccccC
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSELVCANSVLYYEVTLIDFTK 54 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~~~~ 54 (202)
+|++||+.+|..|+.|++..+.+++.+ ||..+.++.||+++++.|+|++..+..
T Consensus 105 ~vi~G~e~aL~gm~~Ge~~~v~ipp~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~~ 159 (280)
T 1q1c_A 105 EVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKG 159 (280)
T ss_dssp SSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred ChhHHHHHHHhcCCCCCEEEEEECcHHhCCCcCccCCCCCCCcEEEEEEeeeecc
Confidence 479999999999999999999999999 999998889999999999999998864
No 241
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.98 E-value=6.4e-06 Score=67.67 Aligned_cols=69 Identities=12% Similarity=-0.002 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 046569 102 LSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKE 181 (202)
Q Consensus 102 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 181 (202)
...|.++|.+++..|.|++|..+|+++ ..|.++|.++..+|+|++|++.++++ +++.+.+.......
T Consensus 122 ~~a~~~IGd~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv 188 (449)
T 1b89_A 122 NAHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACV 188 (449)
T ss_dssp ---------------CTTTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHH
Confidence 358888888888888888888888876 57888999999999999999999999 35555555444433
Q ss_pred HH
Q 046569 182 NQ 183 (202)
Q Consensus 182 ~~ 183 (202)
..
T Consensus 189 ~~ 190 (449)
T 1b89_A 189 DG 190 (449)
T ss_dssp HT
T ss_pred Hc
Confidence 33
No 242
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.75 E-value=0.00026 Score=50.09 Aligned_cols=78 Identities=17% Similarity=0.167 Sum_probs=62.3
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH-----hHH----------------------HHHHHHHHHHHHHhcCHHHH
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN-----GLR----------------------LSCYLNNAACKLKLEDYSEA 121 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~-----~~~----------------------~~~~~~~a~~~~~~~~~~~A 121 (202)
.+..+.-.|+.+|..++|..|...|.+||. +.. .++.+.++.||.+++++.+|
T Consensus 62 ~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~A 141 (167)
T 3ffl_A 62 KYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDA 141 (167)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHH
Confidence 367788999999999999999999999988 111 26889999999999999999
Q ss_pred HHHHHHHhhhCCCChHHHHHHHHHHh
Q 046569 122 SSLCTKVLELEPLNVKALFRRSQAYL 147 (202)
Q Consensus 122 ~~~~~~al~~~p~~~~~~~~~g~~~~ 147 (202)
+..++.+-. ....++....+|..|.
T Consensus 142 i~~Le~Ip~-k~Rt~kvnm~LakLy~ 166 (167)
T 3ffl_A 142 IAILDGIPS-RQRTPKINMLLANLYK 166 (167)
T ss_dssp HHHHHTSCG-GGCCHHHHHHHHHHCC
T ss_pred HHHHhcCCc-hhcCHHHHHHHHHHhc
Confidence 998755422 2246788888887663
No 243
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=97.73 E-value=4.6e-06 Score=66.99 Aligned_cols=54 Identities=33% Similarity=0.448 Sum_probs=1.0
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCcccccCCCceEEEEEEEccccC
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSELVCANSVLYYEVTLIDFTK 54 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~~~~ 54 (202)
++++||+.++..|+.|++..+.+++.+ ||..+..+.||+++++.|+++|.++..
T Consensus 65 ~~i~g~e~~l~gm~~Ge~~~~~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~~~~ 119 (356)
T 3jxv_A 65 QVIKGWDQGIKTMKKGENALFTIPPELAYGESGSPPTIPANATLQFDVELLSWTS 119 (356)
T ss_dssp -----------------------------------------------------CC
T ss_pred ccchHHHHHHhcCCCCCEEEEEEChHHhCCCCCCCCCcCCCCEEEEEeeEEeeec
Confidence 478999999999999999999999999 999998889999999999999998853
No 244
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.72 E-value=0.00054 Score=46.35 Aligned_cols=73 Identities=16% Similarity=0.050 Sum_probs=59.5
Q ss_pred HHHHHhHHHHHcCcHHH---HHHHHHHHHH---h-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHH
Q 046569 72 RKKHDGNLLFRAGKYWR---ASKKYEKATN---G-LRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQ 144 (202)
Q Consensus 72 ~~~~~g~~~~~~~~~~~---A~~~y~~al~---~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 144 (202)
..++.|-.+.+..+..+ +|.++...+. | ..-++++.+|..++++|+|.+|+.+++.+|+.+|+|..+......
T Consensus 37 ~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~ 116 (126)
T 1nzn_A 37 TQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERL 116 (126)
T ss_dssp HHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34455556666665555 8888888887 3 688899999999999999999999999999999999888765543
No 245
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.60 E-value=0.0027 Score=51.38 Aligned_cols=96 Identities=15% Similarity=0.078 Sum_probs=81.6
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH------------------------hHHHHHHHHHHHHHHHhcCHHHHHHH
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN------------------------GLRLSCYLNNAACKLKLEDYSEASSL 124 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~------------------------~~~~~~~~~~a~~~~~~~~~~~A~~~ 124 (202)
....+...|......++...|+..+.+|+. .....+...++..+...|++.+|+..
T Consensus 114 ~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~ 193 (388)
T 2ff4_A 114 RFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAE 193 (388)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 345555667667778899999999999988 23345566778889999999999999
Q ss_pred HHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 046569 125 CTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALT 164 (202)
Q Consensus 125 ~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~ 164 (202)
+..++..+|-+..+|..+-.+++..|+..+|+..|+++-.
T Consensus 194 l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 194 LEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988754
No 246
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.44 E-value=0.0058 Score=53.07 Aligned_cols=123 Identities=8% Similarity=0.012 Sum_probs=91.5
Q ss_pred HHhHHHHHcCcHHHHHHHHHHHHH--h----------------------HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 046569 75 HDGNLLFRAGKYWRASKKYEKATN--G----------------------LRLSCYLNNAACKLKLEDYSEASSLCTKVLE 130 (202)
Q Consensus 75 ~~g~~~~~~~~~~~A~~~y~~al~--~----------------------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 130 (202)
..+...-..|+++.|...|.+++. + ....+|...+.+..+.|..+.|...|.+|+.
T Consensus 383 ~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~ 462 (679)
T 4e6h_A 383 SLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRR 462 (679)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344445567889999999999886 1 1344788888888889999999999999998
Q ss_pred h-CCCChHHHHHHHHHHhcCC-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 046569 131 L-EPLNVKALFRRSQAYLKTS-ELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSML 198 (202)
Q Consensus 131 ~-~p~~~~~~~~~g~~~~~~~-~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f 198 (202)
. .+.....|...|..-...+ +.+.|...|+.+++..|.++.....+......... ..+-|..|.+..
T Consensus 463 ~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~-~~~AR~lferal 531 (679)
T 4e6h_A 463 LKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNE-ESQVKSLFESSI 531 (679)
T ss_dssp TGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC-HHHHHHHHHHHT
T ss_pred hcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCC-HHHHHHHHHHHH
Confidence 8 5556778887777766665 48999999999999999999887766665544332 234455555543
No 247
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.44 E-value=0.0048 Score=42.97 Aligned_cols=85 Identities=9% Similarity=0.001 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHH----------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHH
Q 046569 87 WRASKKYEKATN----------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDE 156 (202)
Q Consensus 87 ~~A~~~y~~al~----------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~ 156 (202)
+.-+..|++|+. ...+-+|.+.|.. ...++.++|.+.|+.++.++...++.|...|.--.++|+...|.
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kAR 114 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSK 114 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHH
Confidence 788899999998 4556666777644 67799999999999999998889999999999999999999999
Q ss_pred HHHHHHHhcCCCCHHH
Q 046569 157 ADIKRALTIDPNNRDV 172 (202)
Q Consensus 157 ~~~~~a~~l~p~~~~~ 172 (202)
..+.+++.+.|...+.
T Consensus 115 kILg~AiG~~~k~~~~ 130 (161)
T 4h7y_A 115 QLLQKAVERGAVPLEM 130 (161)
T ss_dssp HHHHHHHHTTCBCHHH
T ss_pred HHHHHHhccCCCcHHH
Confidence 9999999999987543
No 248
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.43 E-value=0.00047 Score=55.31 Aligned_cols=66 Identities=11% Similarity=-0.019 Sum_probs=56.9
Q ss_pred HHHHHhHHHHHcCcHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChH
Q 046569 72 RKKHDGNLLFRAGKYWRASKKYEKATN-GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVK 137 (202)
Q Consensus 72 ~~~~~g~~~~~~~~~~~A~~~y~~al~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~ 137 (202)
.+...|..++..|++++|+..+++|+. ..+..+|..+|.++...|++++|++.|.+|+.++|..+.
T Consensus 279 ~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 279 IYQIKAVSALVKGKTDESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh
Confidence 334466667778999999999999999 445678889999999999999999999999999997764
No 249
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.43 E-value=0.0017 Score=56.31 Aligned_cols=79 Identities=15% Similarity=0.090 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHH-HHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 046569 87 WRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEAS-SLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRAL 163 (202)
Q Consensus 87 ~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~-~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~ 163 (202)
......|++||. |..+.+|...+..+...|+.++|. ..+.+|+...|.+...|+..+......|++++|...|++++
T Consensus 326 ~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l 405 (679)
T 4e6h_A 326 ARMTYVYMQAAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCI 405 (679)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 446678999999 999999999999999999999997 99999999999999999999999999999999999999999
Q ss_pred hc
Q 046569 164 TI 165 (202)
Q Consensus 164 ~l 165 (202)
..
T Consensus 406 ~~ 407 (679)
T 4e6h_A 406 DR 407 (679)
T ss_dssp HH
T ss_pred HH
Confidence 85
No 250
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.42 E-value=0.0048 Score=41.93 Aligned_cols=72 Identities=18% Similarity=0.066 Sum_probs=57.7
Q ss_pred HHHhHHHHHcC---cHHHHHHHHHHHHH--h-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHH
Q 046569 74 KHDGNLLFRAG---KYWRASKKYEKATN--G-LRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQA 145 (202)
Q Consensus 74 ~~~g~~~~~~~---~~~~A~~~y~~al~--~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 145 (202)
.+.|-.+.+.. +...+|.++...+. | ..-++++.+|..+.++|+|.+|..+++.+|+.+|+|..+......+
T Consensus 44 F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 44 FNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 121 (134)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Confidence 34444455544 45678999988887 4 6789999999999999999999999999999999998876655433
No 251
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=97.34 E-value=0.0018 Score=56.73 Aligned_cols=62 Identities=18% Similarity=0.123 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 046569 102 LSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRAL 163 (202)
Q Consensus 102 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~ 163 (202)
..++...+..++..|+|+-|+....+|+...|.....|+.++.+|..+|+|+.|+-.++...
T Consensus 337 ~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNScP 398 (754)
T 4gns_B 337 SDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSMP 398 (754)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcCC
Confidence 44666778888899999999999999999999999999999999999999999998888774
No 252
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.29 E-value=0.006 Score=42.00 Aligned_cols=71 Identities=18% Similarity=0.084 Sum_probs=57.2
Q ss_pred HHHHhHHHHHcCc---HHHHHHHHHHHHH--h-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHH
Q 046569 73 KKHDGNLLFRAGK---YWRASKKYEKATN--G-LRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRS 143 (202)
Q Consensus 73 ~~~~g~~~~~~~~---~~~A~~~y~~al~--~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 143 (202)
.++.|-.+.+..+ -.+++.+++..+. | ..-++++.+|..+.++|+|.+|..+++.+|+.+|+|..+.....
T Consensus 42 ~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~ 118 (144)
T 1y8m_A 42 RFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 118 (144)
T ss_dssp HHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 3444555555543 4578888888887 3 68889999999999999999999999999999999988766544
No 253
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=97.17 E-value=0.00043 Score=46.09 Aligned_cols=47 Identities=19% Similarity=0.327 Sum_probs=39.2
Q ss_pred CcchHHHHHHhccccccEEEEEec-ccccccCCcccccCCCceEEEEEEEccc
Q 046569 1 NVNEGLERAIMTMKKEEQATVTIS-AEYLCGHEVSELVCANSVLYYEVTLIDF 52 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~l~~~ 52 (202)
++++||+.+|..|+.|++..+.++ |.-||..+ .+++++.|.|++.++
T Consensus 65 ~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~-----~~g~~l~F~V~l~~V 112 (113)
T 1hxv_A 65 SFIKGFETGLIAMKVNQKKTLALTFPSDYHVKE-----LQSKPVTFEVVLKAI 112 (113)
T ss_dssp CSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSG-----GGSCCCEEEEEECCB
T ss_pred ChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCC-----CCCCEEEEEEEEEEE
Confidence 589999999999999999999996 44366554 367899999999876
No 254
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=96.94 E-value=0.019 Score=40.92 Aligned_cols=99 Identities=18% Similarity=0.081 Sum_probs=79.1
Q ss_pred HHhHHHHHcCcHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh--C---------------CCChH
Q 046569 75 HDGNLLFRAGKYWRASKKYEKATNGLRLSCYLNNAACKLKLEDYSEASSLCTKVLEL--E---------------PLNVK 137 (202)
Q Consensus 75 ~~g~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--~---------------p~~~~ 137 (202)
-.+..+|-.|.|..|+-++.+ -+...+.+-.+.||.++++|..|+.++..+++- + |.+-+
T Consensus 38 L~~I~LyyngEY~R~Lf~L~~---lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkE 114 (242)
T 3kae_A 38 LMSIVLYLNGEYTRALFHLHK---LNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEE 114 (242)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT---CCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHH
T ss_pred hhhhhhhhcchHhHHHHHHHh---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHH
Confidence 356778889999888877655 556667777889999999999999999999943 2 33333
Q ss_pred -HHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHH
Q 046569 138 -ALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVY 176 (202)
Q Consensus 138 -~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l 176 (202)
.+..+|..+.+.|+-++|+.+|......+|-.+.+...+
T Consensus 115 fFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~vEnli 154 (242)
T 3kae_A 115 FFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPVENLL 154 (242)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchHHHHH
Confidence 355589999999999999999999999999877666443
No 255
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=96.81 E-value=0.023 Score=46.03 Aligned_cols=91 Identities=11% Similarity=-0.031 Sum_probs=77.0
Q ss_pred HHhHHHHHcCcHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhC---CCCh----HHH
Q 046569 75 HDGNLLFRAGKYWRASKKYEKATN--------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELE---PLNV----KAL 139 (202)
Q Consensus 75 ~~g~~~~~~~~~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~---p~~~----~~~ 139 (202)
..|..++..|+|.+|+..+.+.+. ....+++.....+|..++++.++...+.++.... +.+| ...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 688999999999999999999988 5778889999999999999999999999887543 1232 334
Q ss_pred HHHHHHHh-cCCCHHHHHHHHHHHHhc
Q 046569 140 FRRSQAYL-KTSELEKDEADIKRALTI 165 (202)
Q Consensus 140 ~~~g~~~~-~~~~~~~A~~~~~~a~~l 165 (202)
..-|..+. ..++|..|..+|-.++.-
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 55689999 999999999999998754
No 256
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=96.81 E-value=0.015 Score=48.50 Aligned_cols=82 Identities=10% Similarity=-0.012 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 046569 102 LSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKE 181 (202)
Q Consensus 102 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 181 (202)
..++..+|.+......+..|..+|.+|+.+.|++...|..+|.+....|+.-+|+-+|.+++......+.+..++..+-+
T Consensus 152 hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 34677888888888899999999999999999999999999999999999999999999999988778888888887765
Q ss_pred HH
Q 046569 182 NQ 183 (202)
Q Consensus 182 ~~ 183 (202)
..
T Consensus 232 ~~ 233 (497)
T 1ya0_A 232 KA 233 (497)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 257
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.28 E-value=0.076 Score=43.40 Aligned_cols=96 Identities=13% Similarity=-0.003 Sum_probs=79.6
Q ss_pred HHHHhHHHHHcCcHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhC---CCC---hHHHHH
Q 046569 73 KKHDGNLLFRAGKYWRASKKYEKATN-----GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELE---PLN---VKALFR 141 (202)
Q Consensus 73 ~~~~g~~~~~~~~~~~A~~~y~~al~-----~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~---p~~---~~~~~~ 141 (202)
....|..++..|++..|++.|.++.. ....+++.....+++..++|..+...+.++-.+- +++ ......
T Consensus 134 ~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~ 213 (429)
T 4b4t_R 134 WINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTY 213 (429)
T ss_dssp CHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHH
Confidence 45799999999999999999999887 6778899999999999999999999999987542 222 234455
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHhcCCC
Q 046569 142 RSQAYLKTSELEKDEADIKRALTIDPN 168 (202)
Q Consensus 142 ~g~~~~~~~~~~~A~~~~~~a~~l~p~ 168 (202)
.|.++...++|.+|...|-.++.....
T Consensus 214 ~gl~~l~~r~f~~Aa~~f~e~~~t~~~ 240 (429)
T 4b4t_R 214 YGIHCLAVRNFKEAAKLLVDSLATFTS 240 (429)
T ss_dssp HHHGGGGTSCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHhChHHHHHHHHHHHhccCCc
Confidence 688999999999999999888766543
No 258
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.21 E-value=0.1 Score=43.48 Aligned_cols=99 Identities=13% Similarity=0.027 Sum_probs=80.4
Q ss_pred HHHHhHHHHHcCcHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCC-CChHHHHHHHHHHhc
Q 046569 73 KKHDGNLLFRAGKYWRASKKYEKATN---GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEP-LNVKALFRRSQAYLK 148 (202)
Q Consensus 73 ~~~~g~~~~~~~~~~~A~~~y~~al~---~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~~g~~~~~ 148 (202)
+...-..+.+.|++++|...|.+... ..+...|+.+-..|.+.|++++|...++...+..- .+...|..+-.++..
T Consensus 108 yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~ 187 (501)
T 4g26_A 108 FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMD 187 (501)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhh
Confidence 33445667789999999999999877 44567788888889999999999999999887643 367788889999999
Q ss_pred CCCHHHHHHHHHHHHhc--CCCCHH
Q 046569 149 TSELEKDEADIKRALTI--DPNNRD 171 (202)
Q Consensus 149 ~~~~~~A~~~~~~a~~l--~p~~~~ 171 (202)
.|+.++|...|++..+. .|+...
T Consensus 188 ~g~~d~A~~ll~~Mr~~g~~ps~~T 212 (501)
T 4g26_A 188 TKNADKVYKTLQRLRDLVRQVSKST 212 (501)
T ss_dssp TTCHHHHHHHHHHHHHHTSSBCHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCcCHHH
Confidence 99999999999987765 555433
No 259
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=95.90 E-value=0.007 Score=42.57 Aligned_cols=32 Identities=28% Similarity=0.427 Sum_probs=30.5
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCC
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHE 32 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~ 32 (202)
+|++||+.++..|+.|++..+.+++.. ||..+
T Consensus 52 ~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aYG~~~ 84 (157)
T 3pr9_A 52 QVLPGLDEAILEMDVGEEREVVLPPEKAFGKRD 84 (157)
T ss_dssp SSCHHHHHHHHHCCTTCEEEEEECGGGTTCCCC
T ss_pred cHHHHHHHHHcCCCCCCEEEEEECcHHhcCCCC
Confidence 489999999999999999999999999 99988
No 260
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.89 E-value=0.14 Score=42.54 Aligned_cols=56 Identities=7% Similarity=-0.022 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHH
Q 046569 87 WRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRS 143 (202)
Q Consensus 87 ~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 143 (202)
......|++++. |..+.+|...+..+...|+.+.|...+.+++.. |.+...++..+
T Consensus 196 ~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~ 253 (493)
T 2uy1_A 196 SRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYG 253 (493)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHH
Confidence 445678888888 888899999999999999999999999999998 87765554433
No 261
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.77 E-value=0.15 Score=42.32 Aligned_cols=106 Identities=11% Similarity=0.004 Sum_probs=78.1
Q ss_pred HHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHhhhCCCChHHHHHHHHHHhc
Q 046569 72 RKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLE-DYSEASSLCTKVLELEPLNVKALFRRSQAYLK 148 (202)
Q Consensus 72 ~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~ 148 (202)
.+..-+....+.+..+.|...|.+| . +....+|...|..-...+ +.+.|...|+.+++..|+.+..+...+.....
T Consensus 288 lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~ 366 (493)
T 2uy1_A 288 LRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLR 366 (493)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 3444445555567789999999999 5 234557776777666666 59999999999999889888888888888888
Q ss_pred CCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 046569 149 TSELEKDEADIKRALTIDPNNRDVKLVYMELKEN 182 (202)
Q Consensus 149 ~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 182 (202)
.|+.+.|...|+++ +....+..........
T Consensus 367 ~~~~~~aR~l~er~----~k~~~lw~~~~~fE~~ 396 (493)
T 2uy1_A 367 IGDEENARALFKRL----EKTSRMWDSMIEYEFM 396 (493)
T ss_dssp HTCHHHHHHHHHHS----CCBHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 99999999999887 3345555555554443
No 262
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=95.67 E-value=0.31 Score=40.64 Aligned_cols=87 Identities=8% Similarity=0.035 Sum_probs=72.1
Q ss_pred CcHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhC-CCChHHHHHHHHHHhcCCCHHHHHHHH
Q 046569 84 GKYWRASKKYEKATN---GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELE-PLNVKALFRRSQAYLKTSELEKDEADI 159 (202)
Q Consensus 84 ~~~~~A~~~y~~al~---~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~g~~~~~~~~~~~A~~~~ 159 (202)
+..+.|...|.+... ..+...|+.+-..|.+.|++++|+..++...... +.+...|..+-.+|...|+.++|...|
T Consensus 84 ~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~ 163 (501)
T 4g26_A 84 PGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVD 163 (501)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHH
Confidence 346888899988777 4467788899999999999999999999988754 347788888999999999999999999
Q ss_pred HHHHhc--CCCCH
Q 046569 160 KRALTI--DPNNR 170 (202)
Q Consensus 160 ~~a~~l--~p~~~ 170 (202)
+...+. .|+..
T Consensus 164 ~~M~~~G~~Pd~~ 176 (501)
T 4g26_A 164 AHMVESEVVPEEP 176 (501)
T ss_dssp HHHHHTTCCCCHH
T ss_pred HHHHhcCCCCCHH
Confidence 988776 45443
No 263
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.60 E-value=0.04 Score=48.27 Aligned_cols=57 Identities=23% Similarity=0.261 Sum_probs=52.3
Q ss_pred HHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 046569 72 RKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKV 128 (202)
Q Consensus 72 ~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 128 (202)
.+..++..+..+|+|+.|+..-.+|+. |.....|..++.||..+|+|+.|+-.++-+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 456678888899999999999999999 999999999999999999999999887766
No 264
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=95.54 E-value=0.13 Score=39.28 Aligned_cols=65 Identities=9% Similarity=0.095 Sum_probs=51.6
Q ss_pred HHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHH
Q 046569 111 CKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLV 175 (202)
Q Consensus 111 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~ 175 (202)
..++.|+.++|+..+...++.+|.+...-..+.+.+.-.|++++|..-++.+.+++|.....-..
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~ 70 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQ 70 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHH
Confidence 34567888888888888888888888888888888888888888888888888888876544433
No 265
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=95.54 E-value=0.012 Score=41.92 Aligned_cols=32 Identities=19% Similarity=0.403 Sum_probs=30.3
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCC
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHE 32 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~ 32 (202)
++++||+.+|..|+.|++..+.+++.. ||..+
T Consensus 63 ~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~ 95 (169)
T 4dt4_A 63 SLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPS 95 (169)
T ss_dssp SSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCC
T ss_pred CccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC
Confidence 489999999999999999999999999 99887
No 266
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.40 E-value=0.55 Score=38.53 Aligned_cols=96 Identities=16% Similarity=0.096 Sum_probs=79.1
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh---hCCCCh--
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLE---LEPLNV-- 136 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~---~~p~~~-- 136 (202)
++.....+..+...|+|.+|......... .....++......|+..++|..|...+.++.. -.+.++
T Consensus 137 arl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~l 216 (445)
T 4b4t_P 137 ARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESL 216 (445)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHH
Confidence 55566789999999999999999998865 66788899999999999999999999988742 233333
Q ss_pred --HHHHHHHHHHhcCCCHHHHHHHHHHHHhc
Q 046569 137 --KALFRRSQAYLKTSELEKDEADIKRALTI 165 (202)
Q Consensus 137 --~~~~~~g~~~~~~~~~~~A~~~~~~a~~l 165 (202)
..+...|..+...++|.+|-.+|..++..
T Consensus 217 k~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 217 KLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 34566789999999999999999988765
No 267
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=95.20 E-value=0.014 Score=40.66 Aligned_cols=32 Identities=28% Similarity=0.454 Sum_probs=30.2
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCC
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHE 32 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~ 32 (202)
++++||+.++..|+.|++..+.+++.. ||..+
T Consensus 53 ~vi~G~eeaL~gm~~Ge~~~v~ipp~~aYG~~~ 85 (151)
T 1ix5_A 53 QLIQGFEEAVLDMEVGDEKTVKIPAEKAYGNRN 85 (151)
T ss_dssp CSCHHHHHHHHTCCTTCCCEEEECTTTSSCSCC
T ss_pred ChhHHHHHHHcCCCCCCEEEEEECcHHHCCCCC
Confidence 479999999999999999999999999 99887
No 268
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=95.19 E-value=0.22 Score=38.04 Aligned_cols=91 Identities=10% Similarity=-0.007 Sum_probs=71.9
Q ss_pred HHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHH----------------
Q 046569 78 NLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKAL---------------- 139 (202)
Q Consensus 78 ~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~---------------- 139 (202)
..+++.|+.++|+......|+ |.+......+-..+.-.|+|+.|..-++.+.+++|.....-
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~aE~~R~~v 84 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQARKDF 84 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHHHHH
Confidence 457789999999999999999 99999999999999999999999999999999998653321
Q ss_pred -------------------HHHHHHHhcCCCHHHHHHHHHHHHhcCCC
Q 046569 140 -------------------FRRSQAYLKTSELEKDEADIKRALTIDPN 168 (202)
Q Consensus 140 -------------------~~~g~~~~~~~~~~~A~~~~~~a~~l~p~ 168 (202)
...+......|+.++|...-..+++..|.
T Consensus 85 faG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap~ 132 (273)
T 1zbp_A 85 AQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQE 132 (273)
T ss_dssp TTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCcc
Confidence 11234444456777777777777766654
No 269
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=95.18 E-value=0.02 Score=39.98 Aligned_cols=32 Identities=28% Similarity=0.322 Sum_probs=30.1
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCC
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHE 32 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~ 32 (202)
++++||+.+|..|+.|++..+.+++.. ||..+
T Consensus 45 ~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~ 77 (151)
T 2kr7_A 45 QIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYE 77 (151)
T ss_dssp CSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSC
T ss_pred CccHHHHHHHcCCCCCCEEEEEEecHHHcCCCC
Confidence 479999999999999999999999999 99887
No 270
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=95.09 E-value=0.02 Score=40.24 Aligned_cols=32 Identities=28% Similarity=0.338 Sum_probs=30.1
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCC
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHE 32 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~ 32 (202)
++++||+.+|..|+.|++..+.+++.. ||..+
T Consensus 35 ~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~ 67 (158)
T 3cgm_A 35 NLIPGLEEALEGREEGEAFQAHVPAEKAYGPHD 67 (158)
T ss_dssp SSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCC
T ss_pred CcChHHHHHHcCCCCCCEEEEEECcHHHcCCCC
Confidence 479999999999999999999999999 99887
No 271
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=95.00 E-value=0.022 Score=42.61 Aligned_cols=32 Identities=28% Similarity=0.427 Sum_probs=30.4
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCC
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHE 32 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~ 32 (202)
++++||+.++..|+.|++..+.++|.. ||..+
T Consensus 52 ~vIpG~eeaL~Gm~vGek~~v~Ippe~AYGe~~ 84 (231)
T 3prb_A 52 QVLPGLDEAILEMDVGEEREVVLPPEKAFGKRD 84 (231)
T ss_dssp SSCHHHHHHHHTCCTTCEEEEEECGGGTTCCCC
T ss_pred cHHHHHHHHHcCCCCCCEEEEEeCcHHhcCCCC
Confidence 479999999999999999999999999 99988
No 272
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=94.57 E-value=0.31 Score=30.15 Aligned_cols=33 Identities=18% Similarity=0.032 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 66 KIEACERKKHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 66 ~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
....|..+..+|...-+.|+|.+|+.+|..+|+
T Consensus 7 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 7 LEDMARKYAILAVKADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 567788899999999999999999999999988
No 273
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=94.42 E-value=0.033 Score=39.68 Aligned_cols=32 Identities=19% Similarity=0.221 Sum_probs=29.9
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCC
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHE 32 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~ 32 (202)
++++||+.+|..|+.|++..+.+++.. ||..+
T Consensus 40 ~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~ 72 (171)
T 2k8i_A 40 SLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (171)
T ss_dssp SSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC
T ss_pred CcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC
Confidence 478999999999999999999999998 99886
No 274
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.32 E-value=0.31 Score=40.65 Aligned_cols=79 Identities=14% Similarity=-0.042 Sum_probs=70.7
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHh
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYL 147 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 147 (202)
...+.-.|+.......+..|..+|.+|+. |.....|+.+|.+....|+.-+|+-+|-+++-.....+.+.-++...+.
T Consensus 152 hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 34556799999999999999999999999 9999999999999999999999999999999887778888888877765
Q ss_pred c
Q 046569 148 K 148 (202)
Q Consensus 148 ~ 148 (202)
.
T Consensus 232 ~ 232 (497)
T 1ya0_A 232 K 232 (497)
T ss_dssp H
T ss_pred H
Confidence 4
No 275
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=94.08 E-value=0.041 Score=40.07 Aligned_cols=32 Identities=19% Similarity=0.221 Sum_probs=30.1
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCC
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHE 32 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~ 32 (202)
+|+++|+.+|..|+.|++..|.+++.. ||..+
T Consensus 40 ~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~ 72 (196)
T 2kfw_A 40 SLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (196)
T ss_dssp SSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCC
T ss_pred CcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCC
Confidence 589999999999999999999999999 99877
No 276
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=93.90 E-value=0.32 Score=30.10 Aligned_cols=36 Identities=17% Similarity=0.059 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 63 THEKIEACERKKHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 63 ~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
.......|..+..+|...-+.|+|.+|+.+|..||+
T Consensus 12 ~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 12 QVMLEEMARKYAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 345667889999999999999999999999999988
No 277
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=93.15 E-value=0.11 Score=42.60 Aligned_cols=49 Identities=14% Similarity=0.200 Sum_probs=42.5
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCcccccCCCceEEEEEEEccccC
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSELVCANSVLYYEVTLIDFTK 54 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~~~~ 54 (202)
++++||+.++.+|+.|++..+.+++.. ||..+ .+|.++.|.+.+..+..
T Consensus 193 ~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~-----lag~~~~F~V~v~~v~~ 242 (432)
T 1w26_A 193 RMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAEN-----LKGKAAKFAINLKKVEE 242 (432)
T ss_dssp CSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTT-----TSSCEEEEEEECCEECC
T ss_pred CcchHHHHHhCCCCCCCEEEEEECCchhhCCCC-----CCCceEEEEEEEEEEec
Confidence 478999999999999999999999887 87654 46789999999998864
No 278
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=92.58 E-value=0.66 Score=28.66 Aligned_cols=34 Identities=15% Similarity=0.027 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 65 EKIEACERKKHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 65 ~~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
..+..+..+...|...-..|+|.+|+.+|..|++
T Consensus 8 ~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 8 DFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3556788888999999999999999999999988
No 279
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=92.39 E-value=3.2 Score=32.71 Aligned_cols=93 Identities=12% Similarity=0.043 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHhc-------------------CH-
Q 046569 67 IEACERKKHDGNLLFRAGKYWRASKKYEKATN--------GLRLSCYLNNAACKLKLE-------------------DY- 118 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~~-------------------~~- 118 (202)
.+..+.++...+.+.++++|++|+++...... ..-.++-..+..+|-+.+ .-
T Consensus 32 YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~~~~~~~ 111 (336)
T 3lpz_A 32 YEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLRLFQPGE 111 (336)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSCTTC
T ss_pred cHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCCCCC
Confidence 45566677788889999999999998655544 122222222223333322 10
Q ss_pred -------HHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHH
Q 046569 119 -------SEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADI 159 (202)
Q Consensus 119 -------~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~ 159 (202)
.+|+.+-.+.=...-.++..+..+|..|...+++.+|..+|
T Consensus 112 p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 112 PVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp HHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 12222222211112246788889999999999999998887
No 280
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=92.13 E-value=0.54 Score=43.21 Aligned_cols=89 Identities=7% Similarity=0.051 Sum_probs=71.2
Q ss_pred HHHhHHHHHcCcHHHHHHHHHHHHH-------------------------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 046569 74 KHDGNLLFRAGKYWRASKKYEKATN-------------------------GLRLSCYLNNAACKLKLEDYSEASSLCTKV 128 (202)
Q Consensus 74 ~~~g~~~~~~~~~~~A~~~y~~al~-------------------------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 128 (202)
+-.|..++..|++++|..+|.+|-. ...+..|......+-+.+.++.+++....|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 6789999999999999999999854 112345677777888889999999999999
Q ss_pred hhhCCC-Ch----HHHHHHHHHHhcCCCHHHHHHHHHHH
Q 046569 129 LELEPL-NV----KALFRRSQAYLKTSELEKDEADIKRA 162 (202)
Q Consensus 129 l~~~p~-~~----~~~~~~g~~~~~~~~~~~A~~~~~~a 162 (202)
++..+. +. ..|.++-..+...++|++|...+...
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~ 964 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVL 964 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhC
Confidence 987643 32 25778889999999999998777544
No 281
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=91.67 E-value=1.4 Score=27.28 Aligned_cols=31 Identities=16% Similarity=0.109 Sum_probs=27.5
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
..+..+..+|...-..|+|.+|+.+|..||+
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4567788899999999999999999999998
No 282
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.60 E-value=1.1 Score=38.82 Aligned_cols=30 Identities=10% Similarity=-0.052 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKV 128 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 128 (202)
......|.++|..+.+.++++.|+.+|.++
T Consensus 678 ~~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 678 ESAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hCcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 345778999999999999999999999886
No 283
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=91.49 E-value=1.6 Score=27.52 Aligned_cols=33 Identities=15% Similarity=0.085 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 66 KIEACERKKHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 66 ~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
....|..+...|...-..|+|.+|+.+|..|++
T Consensus 11 ~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 11 DSTAAVAVLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 455688888999999999999999999999988
No 284
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=90.67 E-value=4.4 Score=37.04 Aligned_cols=94 Identities=10% Similarity=-0.097 Sum_probs=73.2
Q ss_pred HHHHHhHHHHHcCcHHHHHHHHHHHHH------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhC-CCChHHHHHHHH
Q 046569 72 RKKHDGNLLFRAGKYWRASKKYEKATN------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELE-PLNVKALFRRSQ 144 (202)
Q Consensus 72 ~~~~~g~~~~~~~~~~~A~~~y~~al~------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~g~ 144 (202)
.+...=+.+.+.|+.++|...|...-+ ..+...|+-+-..|.+.|++++|...+++..+.. ..+...|..+-.
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~ 208 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQ 208 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 355566778899999999999976432 3466788888889999999999999999887754 347777887888
Q ss_pred HHhcCCC-HHHHHHHHHHHHhc
Q 046569 145 AYLKTSE-LEKDEADIKRALTI 165 (202)
Q Consensus 145 ~~~~~~~-~~~A~~~~~~a~~l 165 (202)
++.+.|+ .++|...|+.....
T Consensus 209 glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 209 CMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHhCCCcHHHHHHHHHHHHHc
Confidence 8888887 47788888877665
No 285
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=90.33 E-value=3.6 Score=29.21 Aligned_cols=45 Identities=16% Similarity=0.039 Sum_probs=27.7
Q ss_pred HHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 046569 113 LKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRA 162 (202)
Q Consensus 113 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a 162 (202)
+..|+++.|.+.+..+ ++...|-.+|......|+++-|..||+++
T Consensus 16 L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 16 LEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQ 60 (177)
T ss_dssp HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHh
Confidence 3556666666665543 45566666666666666666666666655
No 286
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.18 E-value=0.75 Score=38.46 Aligned_cols=72 Identities=14% Similarity=0.025 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCC--C---ChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCH
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEP--L---NVKALFRRSQAYLKTSELEKDEADIKRALTIDPNNR 170 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p--~---~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~ 170 (202)
.....+++.+-..|+..+.|+.|....+++.--.. . ....+|..|.++.-+++|.+|..++..|+...|.+.
T Consensus 228 ~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 228 ETKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp CHHHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred chhHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 56677888888999999999999999999963221 1 245677899999999999999999999999988653
No 287
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=90.01 E-value=2.3 Score=28.00 Aligned_cols=34 Identities=18% Similarity=0.201 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 65 EKIEACERKKHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 65 ~~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
..+..|..+..+|...-..++|.+|+.+|..|++
T Consensus 13 ~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 13 PNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 5667788899999999999999999999999988
No 288
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=89.51 E-value=7.2 Score=31.41 Aligned_cols=113 Identities=19% Similarity=0.068 Sum_probs=80.2
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH----------------------------------------------hH--
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN----------------------------------------------GL-- 100 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~----------------------------------------------~~-- 100 (202)
.-....+.|..+.+.|++++-.+....... ..
T Consensus 18 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~fl 97 (394)
T 3txn_A 18 KEQGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFL 97 (394)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677888888888888887666443322 11
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCC--C----ChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcC---CCCHH
Q 046569 101 RLSCYLNNAACKLKLEDYSEASSLCTKVLELEP--L----NVKALFRRSQAYLKTSELEKDEADIKRALTID---PNNRD 171 (202)
Q Consensus 101 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p--~----~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~---p~~~~ 171 (202)
...+-..+|..|+..|+|.+|+..+.++++-.. + -...+..-..+|..++++.++...+.++.... +.+|.
T Consensus 98 r~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~ 177 (394)
T 3txn_A 98 RQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPK 177 (394)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHH
Confidence 122344889999999999999999998886322 1 15567778999999999999999999987664 35565
Q ss_pred HHHHHHHHHH
Q 046569 172 VKLVYMELKE 181 (202)
Q Consensus 172 ~~~~l~~~~~ 181 (202)
+.-.+..+..
T Consensus 178 i~a~i~~~~G 187 (394)
T 3txn_A 178 VQGALDLQSG 187 (394)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 5544444433
No 289
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=89.36 E-value=5.9 Score=30.91 Aligned_cols=102 Identities=13% Similarity=0.165 Sum_probs=59.9
Q ss_pred HHHHhHHHHHcCcHHHHHHHHHHHHH----------hHHHHH--HHHHHHHH-----HHh--cCH-----HHH-----HH
Q 046569 73 KKHDGNLLFRAGKYWRASKKYEKATN----------GLRLSC--YLNNAACK-----LKL--EDY-----SEA-----SS 123 (202)
Q Consensus 73 ~~~~g~~~~~~~~~~~A~~~y~~al~----------~~~~~~--~~~~a~~~-----~~~--~~~-----~~A-----~~ 123 (202)
....|..++..|++.+|+..|...|. .....+ +..++.-| +++ .+. +.- +.
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELA 184 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMA 184 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHH
Confidence 45889999999999999999999988 111122 11111111 111 110 111 11
Q ss_pred HHHHHhhhCCCChHHHHHHH-HHHhcCCCHHHHHHHHHHHHhcCCCCHHHHH
Q 046569 124 LCTKVLELEPLNVKALFRRS-QAYLKTSELEKDEADIKRALTIDPNNRDVKL 174 (202)
Q Consensus 124 ~~~~al~~~p~~~~~~~~~g-~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~ 174 (202)
.|=.-.++.|.|...-++.| ...++.++|..|...-++.+++.|....+.+
T Consensus 185 AYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~~~q 236 (320)
T 3mkr_B 185 AYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPEVAQQ 236 (320)
T ss_dssp HHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHHHHHH
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHHHH
Confidence 11111233444444444444 4567889999999999999999987444333
No 290
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=88.84 E-value=7.1 Score=30.50 Aligned_cols=106 Identities=14% Similarity=0.082 Sum_probs=62.2
Q ss_pred HHHHHHHhHHHHHcCcHHHHHHHHHHHHH----------hHHHHH--HHHHHHHHH-----Hhc-------CHHHH--HH
Q 046569 70 CERKKHDGNLLFRAGKYWRASKKYEKATN----------GLRLSC--YLNNAACKL-----KLE-------DYSEA--SS 123 (202)
Q Consensus 70 a~~~~~~g~~~~~~~~~~~A~~~y~~al~----------~~~~~~--~~~~a~~~~-----~~~-------~~~~A--~~ 123 (202)
.....+.|..++..|++.+|+..|...|. .....+ +..++.-|. ++. +.... +.
T Consensus 114 L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELA 193 (325)
T 3mv2_A 114 VNEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELA 193 (325)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHH
Confidence 33456789999999999999999999988 111122 222221111 111 10111 11
Q ss_pred HHHHHhhhCCCChHHHHHHH-HHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHH
Q 046569 124 LCTKVLELEPLNVKALFRRS-QAYLKTSELEKDEADIKRALTIDPNNRDVKLV 175 (202)
Q Consensus 124 ~~~~al~~~p~~~~~~~~~g-~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~ 175 (202)
.|=.-.++.|.+...-++.| ...++.++|..|...-++.+++.|..+.+.+.
T Consensus 194 AYFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~a~qA 246 (325)
T 3mv2_A 194 AYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRAEQA 246 (325)
T ss_dssp HHGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHHHHHH
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 11111223344433333344 45678899999999999999999986655553
No 291
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=88.28 E-value=2.1 Score=29.79 Aligned_cols=57 Identities=12% Similarity=0.022 Sum_probs=50.5
Q ss_pred HHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChH
Q 046569 81 FRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVK 137 (202)
Q Consensus 81 ~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~ 137 (202)
...++.++|.+.|+.+++ ..++.+|...|..-.+.|+...|...+.+++.+.|....
T Consensus 71 ~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~ 129 (161)
T 4h7y_A 71 KAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLE 129 (161)
T ss_dssp HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHH
T ss_pred HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHH
Confidence 445899999999999988 667889999999999999999999999999999996544
No 292
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=87.74 E-value=3.1 Score=33.32 Aligned_cols=60 Identities=12% Similarity=0.008 Sum_probs=52.4
Q ss_pred HHHHHHhHHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 046569 71 ERKKHDGNLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLE 130 (202)
Q Consensus 71 ~~~~~~g~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 130 (202)
......+..+...|++.+|+..+..++. |..-.++..+-.++...|+..+|+..|..+-.
T Consensus 172 ~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 172 LAHTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3445667778899999999999999988 88888999999999999999999999988754
No 293
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.01 E-value=1.5 Score=35.63 Aligned_cols=76 Identities=8% Similarity=0.066 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCC---ChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcC--CCCHHHHHH
Q 046569 101 RLSCYLNNAACKLKLEDYSEASSLCTKVLELEPL---NVKALFRRSQAYLKTSELEKDEADIKRALTID--PNNRDVKLV 175 (202)
Q Consensus 101 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~--p~~~~~~~~ 175 (202)
...++..+|..|...|+++.|.+.|.++...... ....++....++...+++..+...+.++..+. ..++..+..
T Consensus 130 ~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~ 209 (429)
T 4b4t_R 130 QAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNR 209 (429)
T ss_dssp CSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHH
Confidence 3457889999999999999999999999876433 36788888999999999999999999998773 344554443
Q ss_pred H
Q 046569 176 Y 176 (202)
Q Consensus 176 l 176 (202)
+
T Consensus 210 l 210 (429)
T 4b4t_R 210 Y 210 (429)
T ss_dssp H
T ss_pred H
Confidence 3
No 294
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=86.69 E-value=9.6 Score=29.61 Aligned_cols=93 Identities=12% Similarity=-0.060 Sum_probs=54.6
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHhcCH--HHHHH--------------
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN--------GLRLSCYLNNAACKLKLEDY--SEASS-------------- 123 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~--------~~~~~~~~~~a~~~~~~~~~--~~A~~-------------- 123 (202)
+..+.++...+.+.++++|++|+++...+.. ..-.++-..+..+|-+.+.. ++.+.
T Consensus 31 EAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~ 110 (312)
T 2wpv_A 31 EAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELDPSEP 110 (312)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTCCTTCT
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCCCCCc
Confidence 4455666778888888999999988655544 12222222222333322211 11111
Q ss_pred ----HHHHHhh-------hCCCChHHHHHHHHHHhcCCCHHHHHHHHH
Q 046569 124 ----LCTKVLE-------LEPLNVKALFRRSQAYLKTSELEKDEADIK 160 (202)
Q Consensus 124 ----~~~~al~-------~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~ 160 (202)
..++++. ..-.+|..|..+|..|...+++.+|..+|-
T Consensus 111 ~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 111 NLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp THHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 1222221 112467889999999999999999998884
No 295
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=86.41 E-value=8.4 Score=33.17 Aligned_cols=28 Identities=11% Similarity=0.121 Sum_probs=22.8
Q ss_pred HHHHHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 71 ERKKHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 71 ~~~~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
..+...|..+.+.++++.|...|.++=.
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~~d 709 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNAHD 709 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHccC
Confidence 4557888999999999999999988633
No 296
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=86.31 E-value=6.8 Score=27.78 Aligned_cols=45 Identities=13% Similarity=-0.065 Sum_probs=24.6
Q ss_pred HHcCcHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 046569 81 FRAGKYWRASKKYEKATNGLRLSCYLNNAACKLKLEDYSEASSLCTKV 128 (202)
Q Consensus 81 ~~~~~~~~A~~~y~~al~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 128 (202)
.+.|+++.|.+.... -+....|..+|...+..|+++-|..+|.++
T Consensus 16 L~lg~l~~A~e~a~~---l~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 16 LEYGNLDAALDEAKK---LNDSITWERLIQEALAQGNASLAEMIYQTQ 60 (177)
T ss_dssp HHTTCHHHHHHHHHH---HCCHHHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred HhcCCHHHHHHHHHH---hCCHHHHHHHHHHHHHcCChHHHHHHHHHh
Confidence 344555555555433 234455666666666666666666655554
No 297
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=85.25 E-value=4.6 Score=34.62 Aligned_cols=79 Identities=8% Similarity=-0.034 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHH-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 046569 86 YWRASKKYEKATN-GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALT 164 (202)
Q Consensus 86 ~~~A~~~y~~al~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~ 164 (202)
..++...+.+... .....+...++...++.|+|..|..++...-.-....+...|.+|.++...|+-++|...|+++..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 268 TDEQAKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred ChHHHHHHHhccccCCChHHHHHHHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 4455555555444 111112223333445779999999999776664445688899999999999999999999998875
No 298
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=84.68 E-value=2.5 Score=26.53 Aligned_cols=31 Identities=29% Similarity=0.332 Sum_probs=20.7
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
..|..+-.++..+.+.|+|++||++..+|..
T Consensus 13 n~AH~~~RrAe~ll~~gkydeAIech~kAa~ 43 (97)
T 2crb_A 13 NLAHQQSRRADRLLAAGKYEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhhHhhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 3466666677777777777777777666543
No 299
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=84.30 E-value=9.3 Score=27.29 Aligned_cols=64 Identities=11% Similarity=-0.080 Sum_probs=51.8
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH-------------------hHHH-HHHHHHHHHHHHhcCHHHHHHHHHHH
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN-------------------GLRL-SCYLNNAACKLKLEDYSEASSLCTKV 128 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~-------------------~~~~-~~~~~~a~~~~~~~~~~~A~~~~~~a 128 (202)
.+...+-+.-.+.+.++|..|+...+..|. |... -.+..+|......|+-++|+.++...
T Consensus 61 T~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~S 140 (242)
T 3kae_A 61 TCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRS 140 (242)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhh
Confidence 455566778889999999999999999995 3333 35677888899999999999999887
Q ss_pred hhhC
Q 046569 129 LELE 132 (202)
Q Consensus 129 l~~~ 132 (202)
....
T Consensus 141 f~~~ 144 (242)
T 3kae_A 141 FGKS 144 (242)
T ss_dssp HHHC
T ss_pred cCCc
Confidence 6654
No 300
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=84.22 E-value=17 Score=33.37 Aligned_cols=79 Identities=9% Similarity=-0.033 Sum_probs=62.0
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh----CCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhc--CCCCHHH
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKVLEL----EPLNVKALFRRSQAYLKTSELEKDEADIKRALTI--DPNNRDV 172 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~----~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l--~p~~~~~ 172 (202)
......|+-+-..|.+.|+.++|...+....+. ...+...|..+-..|...|+.++|...|+...+. .|+-...
T Consensus 124 ~~~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTY 203 (1134)
T 3spa_A 124 SGQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSY 203 (1134)
T ss_dssp CHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred HhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHH
Confidence 555667888889999999999999999765432 3458889999999999999999999999988775 4654444
Q ss_pred HHHHH
Q 046569 173 KLVYM 177 (202)
Q Consensus 173 ~~~l~ 177 (202)
...+.
T Consensus 204 ntLI~ 208 (1134)
T 3spa_A 204 AAALQ 208 (1134)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44333
No 301
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=84.17 E-value=4.1 Score=24.37 Aligned_cols=36 Identities=14% Similarity=0.203 Sum_probs=24.9
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 046569 142 RSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYM 177 (202)
Q Consensus 142 ~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~ 177 (202)
+|..+...|++++|..+|-+|+...|.=.....-+.
T Consensus 23 ~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~q 58 (73)
T 3ax2_A 23 LGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQ 58 (73)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 677777777777777777777777776555544443
No 302
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=83.14 E-value=0.31 Score=39.37 Aligned_cols=49 Identities=8% Similarity=0.135 Sum_probs=39.5
Q ss_pred CcchHHHHHHhccccccEEEEEecccc-cccCCcccccCCCceEEEEEEEccccC
Q 046569 1 NVNEGLERAIMTMKKEEQATVTISAEY-LCGHEVSELVCANSVLYYEVTLIDFTK 54 (202)
Q Consensus 1 ~v~~~~~~~~~~m~~ge~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~~~~ 54 (202)
++++||+.++.+|+.|++..+.++..- |+..+ .+|.++.|.+++..+..
T Consensus 196 ~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~-----laGk~~~F~V~v~~i~~ 245 (392)
T 1t11_A 196 RMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAEN-----LKGKAAKFAIKVNKVEA 245 (392)
T ss_dssp CBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTT-----TSSCEEEECCCEEEEEE
T ss_pred CcchhHHHHhCCCCCCCEEEEEEeCccccccCC-----CCCCeEEEEEEEEEEEc
Confidence 478999999999999999999997333 55432 36889999999888864
No 303
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=82.69 E-value=2.2 Score=26.75 Aligned_cols=28 Identities=18% Similarity=0.201 Sum_probs=17.9
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 046569 136 VKALFRRSQAYLKTSELEKDEADIKRAL 163 (202)
Q Consensus 136 ~~~~~~~g~~~~~~~~~~~A~~~~~~a~ 163 (202)
+..+-+++..+...|.|++|+++.+++.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 3445567777777777777766555544
No 304
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=82.68 E-value=3.6 Score=33.85 Aligned_cols=65 Identities=9% Similarity=0.030 Sum_probs=50.5
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhhCC----------CChHHHHHHHHHHhcCCCHHHHHHHHHHHHhc-CCCC
Q 046569 105 YLNNAACKLKLEDYSEASSLCTKVLELEP----------LNVKALFRRSQAYLKTSELEKDEADIKRALTI-DPNN 169 (202)
Q Consensus 105 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p----------~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l-~p~~ 169 (202)
.+++-.+|+++++..-+...+..+-...+ ..+..+|.+|..+...++|.+|..++..|+.. .|.+
T Consensus 179 ~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 179 VNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 35677889999999888777754432221 12467888999999999999999999999999 7765
No 305
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=81.89 E-value=10 Score=26.03 Aligned_cols=50 Identities=8% Similarity=0.080 Sum_probs=34.8
Q ss_pred cCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhc
Q 046569 116 EDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTI 165 (202)
Q Consensus 116 ~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l 165 (202)
|.-+.--+.+...+.-.+-++..++.+|.+|.+.|+..+|-+.+.+|=+-
T Consensus 105 ~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 105 GKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp TCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred ccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 33333333344444555667999999999999999999999998887543
No 306
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=81.42 E-value=4.5 Score=33.86 Aligned_cols=64 Identities=17% Similarity=0.079 Sum_probs=51.7
Q ss_pred HHHHHhHHHHHcCcHHHHHHHHHHHHH-------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCC
Q 046569 72 RKKHDGNLLFRAGKYWRASKKYEKATN-------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLN 135 (202)
Q Consensus 72 ~~~~~g~~~~~~~~~~~A~~~y~~al~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 135 (202)
.+.-.-..|...+.|+.|.....++.- +.....++..|.++.-.++|.+|..++..|++..|.+
T Consensus 233 l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 233 LINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred HHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 334444567778899999999988854 3446778899999999999999999999999988754
No 307
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=80.96 E-value=7.8 Score=24.10 Aligned_cols=45 Identities=22% Similarity=0.244 Sum_probs=33.6
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH----hHHHHHH-HHHHHHH
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN----GLRLSCY-LNNAACK 112 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~----~~~~~~~-~~~a~~~ 112 (202)
+.++.+..+|..+|+.++|.+|+..|.++.. |..-.++ +.++.|-
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten~~i~ki~~fyl~ec~ 100 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLSDNEEIKKIASFYLEECR 100 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccccCHHHHHHHHHHHHHHH
Confidence 5677788889999999999999999999886 4444444 4555554
No 308
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=79.11 E-value=5.2 Score=34.53 Aligned_cols=59 Identities=15% Similarity=0.164 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 137 KALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 137 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
......|...+..|+|.-|.+....++..+|+|.+++..++...+.+.... +...++..
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~--~~~~~r~~ 508 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA--ENAGWRNS 508 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC--SSHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc--cChHHHHH
Confidence 346667888999999999999999999999999999999999988885443 34444443
No 309
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=77.79 E-value=9 Score=27.67 Aligned_cols=52 Identities=12% Similarity=0.001 Sum_probs=36.8
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH-------hHHHHHHHHHHHHHHHhcCHH
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN-------GLRLSCYLNNAACKLKLEDYS 119 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~-------~~~~~~~~~~a~~~~~~~~~~ 119 (202)
+.+.-.+-.|..++.+++|.+|.+.+..|+. .+...++..+-.+-+-+|+..
T Consensus 12 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP 70 (203)
T 3t5x_A 12 QRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMP 70 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 4466777888888888889999988888888 334444555555556667654
No 310
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=73.98 E-value=6 Score=28.61 Aligned_cols=55 Identities=9% Similarity=0.014 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHH-----HHHHHHHHhcCCCHH
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKA-----LFRRSQAYLKTSELE 153 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~-----~~~~g~~~~~~~~~~ 153 (202)
.......+.+|..++..++|.+|..++..|++..|..... +-.+-.+-.-+|++.
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP 70 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMP 70 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3456677889999999999999999999999988865433 222334445567754
No 311
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=73.90 E-value=8 Score=34.87 Aligned_cols=52 Identities=15% Similarity=0.176 Sum_probs=36.8
Q ss_pred HHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 046569 108 NAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRAL 163 (202)
Q Consensus 108 ~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~ 163 (202)
++..+...+.++-| ...+...|.++..-|.+|.++...|++++|..+|++|-
T Consensus 816 l~~~L~~~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 816 LVEKLFLFKQYNAC----MQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHHHTTCHHHH----HHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHhcHHHHH----HHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 34445566666643 33556777777777888888888888888888888765
No 312
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=69.49 E-value=15 Score=21.84 Aligned_cols=25 Identities=20% Similarity=0.283 Sum_probs=14.0
Q ss_pred HHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 74 KHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 74 ~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
...|..+...|++++|+.+|.+||.
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~ 45 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIA 45 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3455555555555555555555555
No 313
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=68.24 E-value=21 Score=32.20 Aligned_cols=38 Identities=11% Similarity=0.023 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhc-CCCCHHHHH
Q 046569 137 KALFRRSQAYLKTSELEKDEADIKRALTI-DPNNRDVKL 174 (202)
Q Consensus 137 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~l-~p~~~~~~~ 174 (202)
..|......+...+-++-++...+.|+.. .++|+....
T Consensus 898 ~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~l~~ 936 (950)
T 4gq2_M 898 CYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSI 936 (950)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCccchH
Confidence 35666777777778888888777777764 455554443
No 314
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=66.93 E-value=7.4 Score=24.55 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=22.3
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHH
Q 046569 142 RSQAYLKTSELEKDEADIKRALTIDPNNRDVKLV 175 (202)
Q Consensus 142 ~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~ 175 (202)
+|..+...|+++.|+.+|-+|+...|.=.....-
T Consensus 26 lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i 59 (95)
T 1om2_A 26 LGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQV 59 (95)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 5777777777777777777777776664343333
No 315
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=65.81 E-value=52 Score=26.65 Aligned_cols=84 Identities=12% Similarity=0.151 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh-hC---CC--ChHHHHHHHHHHhcCCCHHHHHHHHHHHHh---cCCCCH
Q 046569 100 LRLSCYLNNAACKLKLEDYSEASSLCTKVLE-LE---PL--NVKALFRRSQAYLKTSELEKDEADIKRALT---IDPNNR 170 (202)
Q Consensus 100 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-~~---p~--~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~---l~p~~~ 170 (202)
....+...+|..|...|+|.+|.+.+..+.. .. +. -...+..-...+...+++.+|...+.++.. -.+.++
T Consensus 135 erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~ 214 (445)
T 4b4t_P 135 ERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYE 214 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcH
Confidence 3566778899999999999999999988763 22 11 256777889999999999999999999742 355666
Q ss_pred HHHHHHHHHHHHH
Q 046569 171 DVKLVYMELKENQ 183 (202)
Q Consensus 171 ~~~~~l~~~~~~~ 183 (202)
..+..+..+..++
T Consensus 215 ~lk~~~~~~~~~~ 227 (445)
T 4b4t_P 215 SLKLEYYNLLVKI 227 (445)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6555554444443
No 316
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=65.16 E-value=27 Score=23.94 Aligned_cols=55 Identities=15% Similarity=0.109 Sum_probs=42.1
Q ss_pred HHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhC
Q 046569 78 NLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELE 132 (202)
Q Consensus 78 ~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 132 (202)
+.+..+|+-++--..+...+. +-.++++..+|.+|-++|+-.+|-+...+|.+..
T Consensus 99 d~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 99 DILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp HHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 344556666666666666544 5569999999999999999999999999988764
No 317
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=64.97 E-value=10 Score=34.94 Aligned_cols=53 Identities=15% Similarity=0.165 Sum_probs=39.2
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 046569 107 NNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRAL 163 (202)
Q Consensus 107 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~ 163 (202)
.+.......+.++-+.+ .+...|.++..-|.+|.++...|++++|..+|+++-
T Consensus 817 ~l~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa 869 (1139)
T 4fhn_B 817 ELVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 869 (1139)
T ss_dssp HHHHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 34445556666665543 345667777788899999999999999999998874
No 318
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=64.47 E-value=49 Score=27.14 Aligned_cols=71 Identities=10% Similarity=-0.041 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH------------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh-
Q 046569 65 EKIEACERKKHDGNLLFRAGKYWRASKKYEKATN------------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLEL- 131 (202)
Q Consensus 65 ~~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~------------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~- 131 (202)
.+..........-..||+.++...+...+...-. ......++.+|..++..++|.+|..++..|++.
T Consensus 171 kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~l 250 (455)
T 3t5v_B 171 KQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSL 250 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhc
Confidence 3333333444555789999999988888754322 466778899999999999999999999999998
Q ss_pred CCCC
Q 046569 132 EPLN 135 (202)
Q Consensus 132 ~p~~ 135 (202)
.|..
T Consensus 251 cp~~ 254 (455)
T 3t5v_B 251 LNLP 254 (455)
T ss_dssp HHCC
T ss_pred CCcc
Confidence 7754
No 319
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=64.16 E-value=22 Score=22.33 Aligned_cols=37 Identities=16% Similarity=0.183 Sum_probs=28.8
Q ss_pred CHHHHHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 62 DTHEKIEACERKKHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 62 ~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
..+.+-..-......|..+...|+++.|+.+|.+||.
T Consensus 12 d~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~ 48 (95)
T 1om2_A 12 DAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIA 48 (95)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4444545555667889999999999999999988888
No 320
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=63.96 E-value=34 Score=23.77 Aligned_cols=60 Identities=20% Similarity=0.265 Sum_probs=43.9
Q ss_pred HHHHHHhHHHHHcCcHHHHHHHHHHHHH----h-HHHHHHH------HHHHHHHHhcCHHHHHHHHHHHhh
Q 046569 71 ERKKHDGNLLFRAGKYWRASKKYEKATN----G-LRLSCYL------NNAACKLKLEDYSEASSLCTKVLE 130 (202)
Q Consensus 71 ~~~~~~g~~~~~~~~~~~A~~~y~~al~----~-~~~~~~~------~~a~~~~~~~~~~~A~~~~~~al~ 130 (202)
..-...|..+|..|+|-+|.+.++.+=. + ....++. .-|..+.+.|++..|...+.+++.
T Consensus 33 ~~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 33 RRAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3446788899999999999999888755 2 1223332 334456778999999999999986
No 321
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.41 E-value=31 Score=22.52 Aligned_cols=36 Identities=14% Similarity=0.026 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 63 THEKIEACERKKHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 63 ~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
.....+.+..+...|...-..|+-+.|+.+|.++|.
T Consensus 15 ik~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~ 50 (116)
T 2dl1_A 15 IREAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIG 50 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHH
Confidence 345567788888888888888999999999999987
No 322
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=61.32 E-value=37 Score=23.32 Aligned_cols=63 Identities=14% Similarity=0.135 Sum_probs=47.3
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh--hCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKVLE--LEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDP 167 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p 167 (202)
+....+|...+... .++.+.|..... +....+..|-..|..+...|++.+|.+.|+.+++-..
T Consensus 68 ~RyLklWl~ya~~~------~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A 132 (152)
T 4a1g_A 68 PRFISYCLKFAEYN------SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQA 132 (152)
T ss_dssp HHHHHHHHHHHTTB------SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhc------CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 55555555555432 346777777665 4567788888899999999999999999999998753
No 323
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=59.21 E-value=17 Score=31.33 Aligned_cols=49 Identities=16% Similarity=0.105 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCC
Q 046569 103 SCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSE 151 (202)
Q Consensus 103 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~ 151 (202)
......|...+..|+|.-|...++.++..+|++..+...++.+|.++|.
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~ 498 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGY 498 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 3456677778899999999999999999999999999999999998874
No 324
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=58.06 E-value=38 Score=25.06 Aligned_cols=15 Identities=13% Similarity=0.029 Sum_probs=8.0
Q ss_pred CCCHHHHHHHHHHHH
Q 046569 149 TSELEKDEADIKRAL 163 (202)
Q Consensus 149 ~~~~~~A~~~~~~a~ 163 (202)
+++.++|...-++++
T Consensus 186 l~~~~~A~~lAk~af 200 (234)
T 2br9_A 186 LNSPDRACRLAKAAF 200 (234)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 556555555544444
No 325
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=57.78 E-value=30 Score=21.16 Aligned_cols=27 Identities=7% Similarity=0.144 Sum_probs=17.7
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHhc
Q 046569 139 LFRRSQAYLKTSELEKDEADIKRALTI 165 (202)
Q Consensus 139 ~~~~g~~~~~~~~~~~A~~~~~~a~~l 165 (202)
+...|.-.-..|+|++|+.+|..++++
T Consensus 19 lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 19 VLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 344555556777777777777777654
No 326
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=57.24 E-value=26 Score=28.44 Aligned_cols=31 Identities=16% Similarity=0.108 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 046569 100 LRLSCYLNNAACKLKLEDYSEASSLCTKVLE 130 (202)
Q Consensus 100 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 130 (202)
....++..+|.+|+.+++|++|+..+++++.
T Consensus 188 tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 188 NKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 4445666667777777777777777776664
No 327
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=56.30 E-value=19 Score=21.69 Aligned_cols=26 Identities=15% Similarity=0.059 Sum_probs=19.6
Q ss_pred HHHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 73 KKHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 73 ~~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
....|..+-..|+|+.|+.+|+.++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 34566667777888888888888877
No 328
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.79 E-value=18 Score=23.70 Aligned_cols=43 Identities=19% Similarity=0.232 Sum_probs=23.0
Q ss_pred CHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC
Q 046569 117 DYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDP 167 (202)
Q Consensus 117 ~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p 167 (202)
.|++|..+.+++|.++.. |.-...+..|.+.+.++++++.+..
T Consensus 18 ~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~ 60 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISS 60 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhccccc
Confidence 456666667777766551 2222222334445566666666655
No 329
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=55.46 E-value=84 Score=25.63 Aligned_cols=63 Identities=6% Similarity=0.073 Sum_probs=44.4
Q ss_pred HHHHHHHHhhh-----CCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHH
Q 046569 121 ASSLCTKVLEL-----EPLNVKALFRRSQAYLKTSELEKDEADIKRALTI------DPNNRDVKLVYMELKENQ 183 (202)
Q Consensus 121 A~~~~~~al~~-----~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l------~p~~~~~~~~l~~~~~~~ 183 (202)
++..|++|+.. ...+...|..+|-.++..++|.+|+..+-.+-.. ..+|.++.+.+..+...+
T Consensus 283 ~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~eIanel 356 (489)
T 4gq4_A 283 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVANDV 356 (489)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHHHHHHHHh
Confidence 44555555543 3456778888899999999999999988877543 456778877776664444
No 330
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=54.82 E-value=57 Score=23.53 Aligned_cols=93 Identities=5% Similarity=-0.055 Sum_probs=65.1
Q ss_pred HHHHHHHH-----------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh--hCCCChHHHHHHHHHHhcCCCHHHHHH
Q 046569 91 KKYEKATN-----------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLE--LEPLNVKALFRRSQAYLKTSELEKDEA 157 (202)
Q Consensus 91 ~~y~~al~-----------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~~g~~~~~~~~~~~A~~ 157 (202)
..+++++. +....+|...+... ..+....+.+.|..... +....+..|-..|..+...|++.+|.+
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~ 136 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKV 136 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 46666666 66667777766654 23336688888877775 456778888889999999999999999
Q ss_pred HHHHHHhcCCC-CHHHHHHHHHHHHHHH
Q 046569 158 DIKRALTIDPN-NRDVKLVYMELKENQR 184 (202)
Q Consensus 158 ~~~~a~~l~p~-~~~~~~~l~~~~~~~~ 184 (202)
.|+.+++-... -............++.
T Consensus 137 Vy~~GI~~~A~P~~rL~~~~~~F~~R~~ 164 (202)
T 3esl_A 137 LLELGAENNCRPYNRLLRSLSNYEDRLR 164 (202)
T ss_dssp HHHHHHHTTCBSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCccHHHHHHHHHHHHHHHH
Confidence 99999998532 2334444444444443
No 331
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=54.74 E-value=30 Score=28.16 Aligned_cols=32 Identities=16% Similarity=0.149 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKVLE 130 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 130 (202)
.....++..+|.+|+.+++|++|+..+++++.
T Consensus 193 ~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 193 VNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred eeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 34455666667777777777777777777664
No 332
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=54.71 E-value=18 Score=28.89 Aligned_cols=40 Identities=15% Similarity=0.165 Sum_probs=21.8
Q ss_pred HHHHHHHHHH-------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 046569 89 ASKKYEKATN-------GLRLSCYLNNAACKLKLEDYSEASSLCTKV 128 (202)
Q Consensus 89 A~~~y~~al~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 128 (202)
++.+|.+||. ....-.|..+|.++++.+++.+|+..+-.+
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~A 322 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDA 322 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHH
Confidence 5555666655 223333455555666666666666655444
No 333
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=52.73 E-value=52 Score=24.79 Aligned_cols=15 Identities=13% Similarity=0.029 Sum_probs=8.3
Q ss_pred CCCHHHHHHHHHHHH
Q 046569 149 TSELEKDEADIKRAL 163 (202)
Q Consensus 149 ~~~~~~A~~~~~~a~ 163 (202)
+++.++|...-++|+
T Consensus 212 ln~p~~Ac~LAk~AF 226 (261)
T 3ubw_A 212 LNSPDRACRLAKAAF 226 (261)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 566666555544443
No 334
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=51.98 E-value=21 Score=29.14 Aligned_cols=28 Identities=0% Similarity=-0.044 Sum_probs=13.7
Q ss_pred ChHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 046569 135 NVKALFRRSQAYLKTSELEKDEADIKRA 162 (202)
Q Consensus 135 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a 162 (202)
+...|..+|..+++.+++.+|+..+-.+
T Consensus 317 HvYPYtYlgGy~yR~~~~reAl~~WA~A 344 (550)
T 3u84_A 317 HIYPYMYLAGYHCRNRNVREALQAWADT 344 (550)
T ss_dssp CSHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CccceeecchhhhhcchHHHHHHHHHHH
Confidence 4444444555555555555555444443
No 335
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=51.69 E-value=56 Score=24.43 Aligned_cols=12 Identities=17% Similarity=0.180 Sum_probs=5.0
Q ss_pred cCHHHHHHHHHH
Q 046569 116 EDYSEASSLCTK 127 (202)
Q Consensus 116 ~~~~~A~~~~~~ 127 (202)
++.++|.....+
T Consensus 188 n~~~~Ac~lAk~ 199 (248)
T 3uzd_A 188 NAPEQACHLAKT 199 (248)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 444444443333
No 336
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=51.69 E-value=54 Score=24.67 Aligned_cols=42 Identities=21% Similarity=0.294 Sum_probs=21.0
Q ss_pred HHHHHHHHHHH----------hHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHh
Q 046569 88 RASKKYEKATN----------GLRLSCYLNNAACKLK-LEDYSEASSLCTKVL 129 (202)
Q Consensus 88 ~A~~~y~~al~----------~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~al 129 (202)
.|...|+.|.. |....+..|.+..|+. +++.++|+....+++
T Consensus 153 ~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 205 (260)
T 1o9d_A 153 STLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (260)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 45555555554 3333444444444443 456665555554443
No 337
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=51.47 E-value=34 Score=27.95 Aligned_cols=33 Identities=15% Similarity=0.078 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKVLEL 131 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 131 (202)
.....++-.+|.+|+.+++|++|+..+++++..
T Consensus 199 ~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 199 INYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 345556777777777788888888888777753
No 338
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=51.46 E-value=37 Score=27.99 Aligned_cols=29 Identities=14% Similarity=0.058 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 046569 102 LSCYLNNAACKLKLEDYSEASSLCTKVLE 130 (202)
Q Consensus 102 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 130 (202)
..++-.+|.+|+.+++|++|+..+++++.
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~ 231 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLA 231 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 34555555666666666666666666554
No 339
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=51.14 E-value=38 Score=20.43 Aligned_cols=12 Identities=8% Similarity=0.003 Sum_probs=6.2
Q ss_pred HHHHHHHHHhhh
Q 046569 120 EASSLCTKVLEL 131 (202)
Q Consensus 120 ~A~~~~~~al~~ 131 (202)
.|+....+|++.
T Consensus 10 ~Ai~lv~~Ave~ 21 (83)
T 2v6y_A 10 MARKYAILAVKA 21 (83)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 455555555444
No 340
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=50.55 E-value=40 Score=20.43 Aligned_cols=21 Identities=19% Similarity=0.161 Sum_probs=10.5
Q ss_pred HHHhcCCCHHHHHHHHHHHHh
Q 046569 144 QAYLKTSELEKDEADIKRALT 164 (202)
Q Consensus 144 ~~~~~~~~~~~A~~~~~~a~~ 164 (202)
.-.-..|++++|+.+|..+++
T Consensus 27 ve~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 27 VKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHH
Confidence 333455555555555554443
No 341
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=49.47 E-value=18 Score=21.81 Aligned_cols=25 Identities=24% Similarity=0.207 Sum_probs=16.1
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhh
Q 046569 106 LNNAACKLKLEDYSEASSLCTKVLE 130 (202)
Q Consensus 106 ~~~a~~~~~~~~~~~A~~~~~~al~ 130 (202)
..+|.=|..+|+|+.|+.+|+.++.
T Consensus 16 ~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 16 VKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHH
Confidence 3455556667777777777766654
No 342
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=49.23 E-value=45 Score=20.71 Aligned_cols=24 Identities=25% Similarity=0.313 Sum_probs=14.7
Q ss_pred HHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 75 HDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 75 ~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
..|..+|..|+|-+|.+.++..=.
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~ 29 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWL 29 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCChHHHHHHHHHHHh
Confidence 455666666777666666655533
No 343
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=48.71 E-value=3.7 Score=31.01 Aligned_cols=36 Identities=14% Similarity=0.090 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 63 THEKIEACERKKHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 63 ~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
.+.....|..+..+|..+-+.|+|.+|+.+|..|++
T Consensus 16 ~dp~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe 51 (257)
T 2ymb_A 16 QDPQSTAAATVLKRAVELDSESRYPQALVCYQEGID 51 (257)
T ss_dssp ------------------------------------
T ss_pred CChhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 334556688888999999999999999999999998
No 344
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=54.18 E-value=3.7 Score=35.52 Aligned_cols=60 Identities=13% Similarity=0.207 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 046569 137 KALFRRSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSML 198 (202)
Q Consensus 137 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f 198 (202)
.....+|...+..|+|.-|.+....++..+|+|.+++..++...+.+.... +...++..|
T Consensus 462 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~--~~~~~rn~y 521 (668)
T 2yhe_A 462 DAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQT--ENALWRNMY 521 (668)
Confidence 345567888889999999999999999999999999999999888885443 444555443
No 345
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=47.47 E-value=8.6 Score=17.31 Aligned_cols=13 Identities=15% Similarity=0.284 Sum_probs=7.8
Q ss_pred HHHHHHHhhhhcC
Q 046569 189 YQAEIFGSMLSKM 201 (202)
Q Consensus 189 ~~~~~~~~~f~~~ 201 (202)
+-|+.|+++|.++
T Consensus 5 rfrkkfkklfkkl 17 (27)
T 2ket_A 5 RFRKKFKKLFKKL 17 (27)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 3456667776654
No 346
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=46.86 E-value=28 Score=21.58 Aligned_cols=32 Identities=13% Similarity=-0.033 Sum_probs=18.9
Q ss_pred HHHHHHHHHHhHHHHHc---CcHHHHHHHHHHHHH
Q 046569 67 IEACERKKHDGNLLFRA---GKYWRASKKYEKATN 98 (202)
Q Consensus 67 ~~~a~~~~~~g~~~~~~---~~~~~A~~~y~~al~ 98 (202)
.+.|-.+...|-..-.. |+-++|+.+|.++|.
T Consensus 13 h~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~ 47 (89)
T 3eab_A 13 HKQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIE 47 (89)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHH
Confidence 34455555555555555 666666666666655
No 347
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=46.78 E-value=69 Score=22.15 Aligned_cols=60 Identities=3% Similarity=-0.009 Sum_probs=45.2
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhhCCCC------hHHHHH-H--HHHHhcCCCHHHHHHHHHHHHhc
Q 046569 106 LNNAACKLKLEDYSEASSLCTKVLELEPLN------VKALFR-R--SQAYLKTSELEKDEADIKRALTI 165 (202)
Q Consensus 106 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~-~--g~~~~~~~~~~~A~~~~~~a~~l 165 (202)
+..+..++..|+|-+|-+.++.+....+.. ..++.. + |..+...|+...|...+.+++..
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 445666777799999999999999876654 333444 3 34556679999999999999874
No 348
>1ccd_A Clara cell 17 KD protein; phospholipase A2 inhibitor; 3.00A {Rattus rattus} SCOP: a.101.1.1
Probab=46.37 E-value=45 Score=19.91 Aligned_cols=45 Identities=16% Similarity=0.036 Sum_probs=37.3
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 046569 156 EADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSMLSK 200 (202)
Q Consensus 156 ~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~ 200 (202)
...|...++..-.++++......+++-..+...+.+....+++++
T Consensus 20 ~~~Y~~~l~~y~~~~~a~eA~~~lK~C~D~ls~e~r~~i~~~l~k 64 (77)
T 1ccd_A 20 ESNYEAALKPFNPASDLQNAGTQLKRLVDTLPQETRINIVKLTEK 64 (77)
T ss_dssp HHHHHHHHTTTCCCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 345777888888889999999999999988888888888888765
No 349
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=45.27 E-value=30 Score=28.14 Aligned_cols=43 Identities=14% Similarity=0.103 Sum_probs=34.7
Q ss_pred HHHHHHHHHHH-------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 046569 88 RASKKYEKATN-------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLE 130 (202)
Q Consensus 88 ~A~~~y~~al~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 130 (202)
.++.+|++||. ....-.|..+|-++.+.++|.+|+..+..+-.
T Consensus 282 ~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~ 331 (489)
T 4gq4_A 282 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 331 (489)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhh
Confidence 37788999888 45555678889999999999999999877743
No 350
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=44.79 E-value=1.1e+02 Score=25.46 Aligned_cols=34 Identities=9% Similarity=0.010 Sum_probs=15.3
Q ss_pred CHHHHHHHHHHHhhh-CCCChHHHHHHHHHHhcCC
Q 046569 117 DYSEASSLCTKVLEL-EPLNVKALFRRSQAYLKTS 150 (202)
Q Consensus 117 ~~~~A~~~~~~al~~-~p~~~~~~~~~g~~~~~~~ 150 (202)
.|++|+..++++-.. +++...-++.++.-|..-|
T Consensus 454 ~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~aG 488 (526)
T 2wb7_A 454 EYKAAINDLQKAAQQDDYQMFLNYLNAAKKHEMAG 488 (526)
T ss_dssp HHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccCCHHHHHHHHHHhhhhhhcc
Confidence 344555555554422 2333444555554444333
No 351
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=44.66 E-value=38 Score=22.59 Aligned_cols=30 Identities=23% Similarity=0.326 Sum_probs=27.1
Q ss_pred HHHHHHHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 69 ACERKKHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 69 ~a~~~~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
.+..+.++|..++.+|+.-+|-+.|-+|.+
T Consensus 6 lAe~yL~EA~ell~kGD~vQAsEK~ykAae 35 (129)
T 2jpu_A 6 SAEVYYEEAEEFLSKGDLVQACEKYYKAAE 35 (129)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 477889999999999999999999999887
No 352
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=44.51 E-value=67 Score=26.02 Aligned_cols=46 Identities=11% Similarity=-0.026 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhhhCCC--------ChHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 046569 119 SEASSLCTKVLELEPL--------NVKALFRRSQAYLKTSELEKDEADIKRALT 164 (202)
Q Consensus 119 ~~A~~~~~~al~~~p~--------~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~ 164 (202)
+..+.+++.|+..-|. ...++..+|.+|...+++++|....+.++.
T Consensus 165 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 165 DFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 4556677777765442 245788899999999999999999999885
No 353
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=43.68 E-value=86 Score=23.57 Aligned_cols=47 Identities=23% Similarity=0.241 Sum_probs=23.4
Q ss_pred hcCHHHHHHHHHHHhhhCCCChH---HHHHHHH-HHhcCCCHHHHHHHHHHHHh
Q 046569 115 LEDYSEASSLCTKVLELEPLNVK---ALFRRSQ-AYLKTSELEKDEADIKRALT 164 (202)
Q Consensus 115 ~~~~~~A~~~~~~al~~~p~~~~---~~~~~g~-~~~~~~~~~~A~~~~~~a~~ 164 (202)
+.-|..|.+.. -.+.|.+|- ..++.+. .|.-+++.++|...-++|++
T Consensus 176 ~~aY~~A~~iA---~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 176 LKAYKDATVVA---KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHH---TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH---HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 33455555544 345565542 1222222 22346777777666666654
No 354
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=43.38 E-value=94 Score=23.00 Aligned_cols=24 Identities=25% Similarity=0.117 Sum_probs=10.0
Q ss_pred HHHHHHHHHH-HhcCHHHHHHHHHH
Q 046569 104 CYLNNAACKL-KLEDYSEASSLCTK 127 (202)
Q Consensus 104 ~~~~~a~~~~-~~~~~~~A~~~~~~ 127 (202)
+-.|.+..|. -+++.++|.....+
T Consensus 177 LaLNfSVFyyEiln~~~~Ac~lAk~ 201 (236)
T 3iqu_A 177 LALNFSVFHYEIANSPEEAISLAKT 201 (236)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3334433333 23455554444433
No 355
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=43.13 E-value=35 Score=23.76 Aligned_cols=66 Identities=12% Similarity=0.089 Sum_probs=38.2
Q ss_pred HHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHHHHH
Q 046569 120 EASSLCTKVLELEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPNN-RDVKLVYMELKENQRE 185 (202)
Q Consensus 120 ~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~~-~~~~~~l~~~~~~~~~ 185 (202)
.|...+..+...+|......-.+..++....+....+..|...+..||.- ..+...+..+....++
T Consensus 74 ~a~~~L~~l~~~d~~l~~~~e~l~~a~~~l~d~~~~L~~y~~~le~DP~rL~~ie~RL~~l~~L~RK 140 (175)
T 4abx_A 74 EAVRALNAGAKYDETVMQLQNELRAALESVQAIAGELRDVAEGSAADPEALDRVEARLSALSKLKNK 140 (175)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 44555555556666666666777777777777777766666666666632 2333333334333333
No 356
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=42.65 E-value=49 Score=21.51 Aligned_cols=17 Identities=0% Similarity=0.001 Sum_probs=7.1
Q ss_pred HHHHHHHHHhcCCCCHH
Q 046569 155 DEADIKRALTIDPNNRD 171 (202)
Q Consensus 155 A~~~~~~a~~l~p~~~~ 171 (202)
|++.|..++...|.++.
T Consensus 44 Aie~l~~alk~e~~~~~ 60 (117)
T 2cpt_A 44 AVQYFLHVVKYEAQGDK 60 (117)
T ss_dssp HHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHHHHhccCCHH
Confidence 33334444444444443
No 357
>3pmr_A Amyloid-like protein 1; heparin binding, cell adhesion; 2.11A {Homo sapiens} SCOP: a.47.4.0 PDB: 3q7l_A 3q7g_A 3qmk_A*
Probab=41.65 E-value=1e+02 Score=22.54 Aligned_cols=84 Identities=12% Similarity=0.144 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcC--CCHHHHHHHHHHHHhcCCCC-----HHHHH
Q 046569 102 LSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKT--SELEKDEADIKRALTIDPNN-----RDVKL 174 (202)
Q Consensus 102 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~--~~~~~A~~~~~~a~~l~p~~-----~~~~~ 174 (202)
......+..+. -...-..|+.+|..++..+|.++.-.+..-..|..- .|-.-.+..|+.+...||.. +.+..
T Consensus 93 ~etH~~RV~a~-Ln~rrr~Ale~y~~ALq~~pP~~~~vl~aLk~yirae~KDR~Htl~hf~Hv~~~dpe~A~~~k~~vl~ 171 (219)
T 3pmr_A 93 VETHATRVIAL-INDQRRAALEGFLAALQADPPQAERVLLALRRYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVHT 171 (219)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHTTTHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHccCHHHHhhcchHHHH
Confidence 33344444333 233566899999999999988876655544444333 23334889999999999864 46666
Q ss_pred HHHHHHHHHHHH
Q 046569 175 VYMELKENQREY 186 (202)
Q Consensus 175 ~l~~~~~~~~~~ 186 (202)
.|..+..++.+.
T Consensus 172 hL~~Id~r~NqS 183 (219)
T 3pmr_A 172 HLQVIEERVNQS 183 (219)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh
Confidence 777777776653
No 358
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=41.58 E-value=1e+02 Score=24.66 Aligned_cols=62 Identities=10% Similarity=0.134 Sum_probs=46.0
Q ss_pred HHHHHHHHhhh-----CCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHH
Q 046569 121 ASSLCTKVLEL-----EPLNVKALFRRSQAYLKTSELEKDEADIKRALTI------DPNNRDVKLVYMELKEN 182 (202)
Q Consensus 121 A~~~~~~al~~-----~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l------~p~~~~~~~~l~~~~~~ 182 (202)
++..|.+++.. +..+...|..+|..+++.+++.+|+..+-.+-.. ..+|.++.+.+-.+-..
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAne 348 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYSKDDEEMYKEFHEIAND 348 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHH
Confidence 66666666654 4567888999999999999999999999877654 23467777777665443
No 359
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=41.52 E-value=63 Score=23.80 Aligned_cols=47 Identities=15% Similarity=-0.004 Sum_probs=22.6
Q ss_pred CcHHHHHHHHHHHHH----------hHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHhh
Q 046569 84 GKYWRASKKYEKATN----------GLRLSCYLNNAACKL-KLEDYSEASSLCTKVLE 130 (202)
Q Consensus 84 ~~~~~A~~~y~~al~----------~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~ 130 (202)
|+-+.|...|+.|.+ |....+-.|.+..|+ -+++.++|.....+|+.
T Consensus 139 g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 139 CSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp SCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 445555555655554 222233334444333 34555555555555543
No 360
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=41.02 E-value=84 Score=25.57 Aligned_cols=48 Identities=19% Similarity=0.093 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHhhhCCC--------ChHHHHHHHHHHhcCCCHHHHHHHHHHHHhc
Q 046569 118 YSEASSLCTKVLELEPL--------NVKALFRRSQAYLKTSELEKDEADIKRALTI 165 (202)
Q Consensus 118 ~~~A~~~~~~al~~~p~--------~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l 165 (202)
|+.-+.+++.|+..-|. ...++..+|.+|...+++++|....+.++..
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 45567778888776543 2457888999999999999999999999864
No 361
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=40.98 E-value=62 Score=19.90 Aligned_cols=30 Identities=10% Similarity=0.061 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHhHHHHHcCcHHHHHHHH
Q 046569 64 HEKIEACERKKHDGNLLFRAGKYWRASKKY 93 (202)
Q Consensus 64 ~~~~~~a~~~~~~g~~~~~~~~~~~A~~~y 93 (202)
.+....+..+.+.|..+++.|++..|+..+
T Consensus 33 ~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~i 62 (87)
T 2pmr_A 33 EAVVERALNYRDDSVYYLEKGDHITSFGCI 62 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 334445555555555555555555555443
No 362
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=40.67 E-value=80 Score=25.91 Aligned_cols=48 Identities=27% Similarity=0.201 Sum_probs=36.3
Q ss_pred HHHHHHHHHHhhhCCC-----------ChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcC
Q 046569 119 SEASSLCTKVLELEPL-----------NVKALFRRSQAYLKTSELEKDEADIKRALTID 166 (202)
Q Consensus 119 ~~A~~~~~~al~~~p~-----------~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~ 166 (202)
+.-+.+++.|+..-|. ..-++..+|.+|...+++++|....++++...
T Consensus 175 ~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 175 AQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp HHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 3455666677665442 23577889999999999999999999998753
No 363
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=40.00 E-value=67 Score=26.14 Aligned_cols=32 Identities=13% Similarity=-0.133 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh
Q 046569 100 LRLSCYLNNAACKLKLEDYSEASSLCTKVLEL 131 (202)
Q Consensus 100 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 131 (202)
....++-.+|.+|+.+++|++|...+++++..
T Consensus 189 tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 189 NTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 34567778888888888888888888888753
No 364
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=39.98 E-value=69 Score=26.45 Aligned_cols=29 Identities=14% Similarity=-0.019 Sum_probs=19.5
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 046569 136 VKALFRRSQAYLKTSELEKDEADIKRALT 164 (202)
Q Consensus 136 ~~~~~~~g~~~~~~~~~~~A~~~~~~a~~ 164 (202)
..++..+|.+|...+++++|....+.++.
T Consensus 182 ~aA~allarv~L~~~~~~~A~~~a~~vi~ 210 (517)
T 3qnk_A 182 GAAYALKSRVELYDKRYEDVIKSCAEVYK 210 (517)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566667777777777777777777664
No 365
>1utg_A Uteroglobin; steroid binding; 1.34A {Oryctolagus cuniculus} SCOP: a.101.1.1 PDB: 2utg_A
Probab=38.69 E-value=44 Score=19.50 Aligned_cols=45 Identities=13% Similarity=0.067 Sum_probs=35.1
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 046569 156 EADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAEIFGSMLSK 200 (202)
Q Consensus 156 ~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~ 200 (202)
...|...++..-.++++..+...+++-..+...+.|....+++.+
T Consensus 18 ~~~Y~~~l~~y~~~~~~~~A~~~lK~C~d~ls~e~~~~i~~~l~k 62 (70)
T 1utg_A 18 PSSYETSLKEFEPDDTMKDAGMQMKKVLDSLPQTTRENIMKLTEK 62 (70)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 345777777777888899999998888887777788777777654
No 366
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=38.67 E-value=6.5 Score=32.01 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 66 KIEACERKKHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 66 ~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
....|..+..+|..+-+.|+|++|+.+|..|++
T Consensus 7 ~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~ 39 (444)
T 2zan_A 7 NLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQ 39 (444)
T ss_dssp ---------------------------------
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 455677888889999999999999999999998
No 367
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=38.29 E-value=74 Score=25.80 Aligned_cols=46 Identities=22% Similarity=0.109 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhhhCCC--------ChHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 046569 119 SEASSLCTKVLELEPL--------NVKALFRRSQAYLKTSELEKDEADIKRALT 164 (202)
Q Consensus 119 ~~A~~~~~~al~~~p~--------~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~ 164 (202)
+.-+.+++.|+..-|. ...++..+|.+|...+++++|....+.++.
T Consensus 171 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 171 TEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 4556677777765443 245788899999999999999999999886
No 368
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=38.23 E-value=69 Score=19.64 Aligned_cols=31 Identities=16% Similarity=0.110 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHhHHHHHcCcHHHHHHHHH
Q 046569 64 HEKIEACERKKHDGNLLFRAGKYWRASKKYE 94 (202)
Q Consensus 64 ~~~~~~a~~~~~~g~~~~~~~~~~~A~~~y~ 94 (202)
.+....+..+.+.|..+++.|++..|+..+.
T Consensus 29 ~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~is 59 (86)
T 2oo2_A 29 EGFMRNIEAYISDSRYFLEKGDLVRAFECVV 59 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4455666666677777777777766666544
No 369
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=38.07 E-value=99 Score=21.42 Aligned_cols=79 Identities=8% Similarity=0.066 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh--hCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCC-CHHHHHH
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKVLE--LEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDPN-NRDVKLV 175 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p~-~~~~~~~ 175 (202)
+....+|...+... ..+.+.|..... +....+..|...|..+...|++.+|.+.|+.++..... ...+...
T Consensus 63 ~RyLklWl~ya~~~------~~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~P~~~L~~~ 136 (164)
T 2wvi_A 63 PRFLNLWLKLGRLC------NEPLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPLERLQSQ 136 (164)
T ss_dssp HHHHHHHHHHHHHC------SCHHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHHHHHHH
T ss_pred HHHHHHHHHHHHhc------CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence 66666777666552 335566666664 55677888888999999999999999999999998632 2334444
Q ss_pred HHHHHHHH
Q 046569 176 YMELKENQ 183 (202)
Q Consensus 176 l~~~~~~~ 183 (202)
......++
T Consensus 137 ~~~F~~R~ 144 (164)
T 2wvi_A 137 HRQFQARV 144 (164)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444433
No 370
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=37.49 E-value=94 Score=21.00 Aligned_cols=37 Identities=11% Similarity=0.007 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 62 DTHEKIEACERKKHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 62 ~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
+...-+..+..+...|..+...|+.+.|--.|-+.+.
T Consensus 32 ~l~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~ 68 (146)
T 2xze_A 32 PPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYIT 68 (146)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4555667777777777777777777777777766543
No 371
>3umh_A Amyloid beta A4 protein; metal binding site, metal binding, cell surface, secretory P metal binding protein; 2.00A {Homo sapiens} SCOP: a.47.4.1 PDB: 3umi_A 3umk_A 1rw6_A 3nyl_A 3nyj_A 1tkn_A
Probab=36.81 E-value=1.2e+02 Score=22.00 Aligned_cols=83 Identities=11% Similarity=0.149 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcC--CCHHHHHHHHHHHHhcCCCC-----HHHHH
Q 046569 102 LSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKT--SELEKDEADIKRALTIDPNN-----RDVKL 174 (202)
Q Consensus 102 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~--~~~~~A~~~~~~a~~l~p~~-----~~~~~ 174 (202)
......+..+. -......|+.+|..|+..+|.++.-.+..-.-|..- .|-.-.+..|+.+...+|.. +.+..
T Consensus 86 ~etH~qRV~a~-ln~rrr~Ale~y~~ALq~~pp~~~~il~aLk~yirae~KDR~Hti~hy~Hv~~~dpe~A~~~k~~v~~ 164 (211)
T 3umh_A 86 VETHMARVEAM-LNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMT 164 (211)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCHHHHHhcchHHHH
Confidence 33334443333 234567899999999999998876555543333333 23344789999999999864 34455
Q ss_pred HHHHHHHHHHH
Q 046569 175 VYMELKENQRE 185 (202)
Q Consensus 175 ~l~~~~~~~~~ 185 (202)
.|..+..++.+
T Consensus 165 hL~~id~r~Nq 175 (211)
T 3umh_A 165 HLRVIYERMNQ 175 (211)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhH
Confidence 55555555544
No 372
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=36.67 E-value=2e+02 Score=24.52 Aligned_cols=108 Identities=7% Similarity=-0.169 Sum_probs=64.2
Q ss_pred HHhHHHHHcCcHHHHHHHHHHHHH------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhc
Q 046569 75 HDGNLLFRAGKYWRASKKYEKATN------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLK 148 (202)
Q Consensus 75 ~~g~~~~~~~~~~~A~~~y~~al~------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~ 148 (202)
..+.......+.+.|...+..... .........++.-....+...++...+..+....+++...-...+.++ .
T Consensus 219 ~~~~~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~Al-r 297 (618)
T 1qsa_A 219 AVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMAL-G 297 (618)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHHHH-H
T ss_pred HHHHHHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHHHHHHHHH-H
Confidence 344445556678888888877654 222223333443343444355777777776654444333444444554 5
Q ss_pred CCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 046569 149 TSELEKDEADIKRALTIDPNNRDVKLVYMELKENQ 183 (202)
Q Consensus 149 ~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 183 (202)
.|+++.|...|.+.-.-.+........+.+....+
T Consensus 298 ~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~ 332 (618)
T 1qsa_A 298 TGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLER 332 (618)
T ss_dssp HTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHccccccccHhHHHHHHHHHHHc
Confidence 69999999999765553334566677777765554
No 373
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=35.53 E-value=61 Score=26.51 Aligned_cols=31 Identities=13% Similarity=0.126 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 046569 100 LRLSCYLNNAACKLKLEDYSEASSLCTKVLE 130 (202)
Q Consensus 100 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 130 (202)
....++..+|.+|+.+++|++|+..+++++.
T Consensus 178 tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 178 TQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred cHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 4455777888888888999999988888874
No 374
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=35.53 E-value=1.7e+02 Score=24.00 Aligned_cols=41 Identities=15% Similarity=0.111 Sum_probs=33.4
Q ss_pred HHHHHHHHHH-------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh
Q 046569 89 ASKKYEKATN-------GLRLSCYLNNAACKLKLEDYSEASSLCTKVL 129 (202)
Q Consensus 89 A~~~y~~al~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al 129 (202)
++.+|.+||. ....--|..+|.+|++.+++.+|+..+-.+-
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa 345 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTA 345 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHH
Confidence 7888999998 4445567788999999999999999876654
No 375
>2npu_A FKBP12-rapamycin complex-associated protein; four-helix bundle, transferase; NMR {Homo sapiens}
Probab=34.59 E-value=77 Score=20.95 Aligned_cols=53 Identities=15% Similarity=0.078 Sum_probs=25.7
Q ss_pred HHHHHcCcHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 046569 78 NLLFRAGKYWRASKKYEKATN--GLRLSCYLNNAACKLKLEDYSEASSLCTKVLE 130 (202)
Q Consensus 78 ~~~~~~~~~~~A~~~y~~al~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 130 (202)
..+|..++.+..+..+....+ ...+......+....--.+..+|..++++..+
T Consensus 48 rlyf~~~n~~~m~~~L~pLh~~l~~~PeT~~E~sF~~~fG~~L~~A~~~~~~y~~ 102 (126)
T 2npu_A 48 RLYFGERNVKGMFEVLEPLHAMMERGPQTLKETSFNQAYGRDLMEAQEWCRKYMK 102 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcccCHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 444566666666666644433 11233333333333333445566666655543
No 376
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=33.04 E-value=86 Score=19.27 Aligned_cols=17 Identities=6% Similarity=-0.005 Sum_probs=7.6
Q ss_pred hcCCCHHHHHHHHHHHH
Q 046569 147 LKTSELEKDEADIKRAL 163 (202)
Q Consensus 147 ~~~~~~~~A~~~~~~a~ 163 (202)
-..|+|++|+.+|..++
T Consensus 26 D~~g~y~eAl~~Y~~Ai 42 (93)
T 1wfd_A 26 DAESRYQQALVCYQEGI 42 (93)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHH
Confidence 34445444444444433
No 377
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=32.82 E-value=57 Score=23.92 Aligned_cols=62 Identities=16% Similarity=0.230 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhhhCCCChHH------HHH--HHHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 046569 119 SEASSLCTKVLELEPLNVKA------LFR--RSQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMELK 180 (202)
Q Consensus 119 ~~A~~~~~~al~~~p~~~~~------~~~--~g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 180 (202)
+-|+..++.+-+-.+-+... +.. .-.++...|.|++|.+.+++.+.-+|.+...+..|..+-
T Consensus 89 ESAl~v~~~I~~e~~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II 158 (235)
T 3bu8_A 89 ESAINVLEMIKTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNII 158 (235)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHH
Confidence 45666666665555432221 111 235667899999999999999998777766666665543
No 378
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=32.52 E-value=82 Score=18.85 Aligned_cols=20 Identities=10% Similarity=0.064 Sum_probs=11.4
Q ss_pred HHhcCCCHHHHHHHHHHHHh
Q 046569 145 AYLKTSELEKDEADIKRALT 164 (202)
Q Consensus 145 ~~~~~~~~~~A~~~~~~a~~ 164 (202)
-.-..|++++|+.+|..+++
T Consensus 22 ~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 22 DLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHH
Confidence 33455666666666655555
No 379
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=30.01 E-value=1.9e+02 Score=23.40 Aligned_cols=23 Identities=13% Similarity=0.004 Sum_probs=15.8
Q ss_pred HHHHhHHHHHcCcHHHHHHHHHH
Q 046569 73 KKHDGNLLFRAGKYWRASKKYEK 95 (202)
Q Consensus 73 ~~~~g~~~~~~~~~~~A~~~y~~ 95 (202)
+...++.+...++|.+|--.+..
T Consensus 38 l~~L~~~h~~~~ny~EAa~~l~l 60 (436)
T 2yin_A 38 LYKLRDLHLDCDNYTEAAYTLLL 60 (436)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHCcCHHHHHHHHHH
Confidence 34567777777888777776643
No 380
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=30.01 E-value=1.4e+02 Score=24.25 Aligned_cols=29 Identities=7% Similarity=-0.114 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhc
Q 046569 137 KALFRRSQAYLKTSELEKDEADIKRALTI 165 (202)
Q Consensus 137 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~l 165 (202)
-++..+|.+|...+++++|....++++..
T Consensus 198 aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 198 SAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 46778999999999999999999999864
No 381
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=29.84 E-value=28 Score=25.16 Aligned_cols=37 Identities=8% Similarity=0.116 Sum_probs=24.3
Q ss_pred HHHHhcCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 046569 143 SQAYLKTSELEKDEADIKRALTIDPNNRDVKLVYMEL 179 (202)
Q Consensus 143 g~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~~ 179 (202)
-.++...|.|++|.+.+++.+.-+|.+.-.+..|..+
T Consensus 124 V~VCiekg~Fk~A~eiLkr~f~~~~~~~~lr~kL~~I 160 (211)
T 3bqo_A 124 IAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMI 160 (211)
T ss_dssp HHHHHHTTCHHHHHHHHHHHC-----CCTTHHHHHHH
T ss_pred HHHHHHccchHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 4678889999999999999888887775555555443
No 382
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=29.59 E-value=1e+02 Score=19.03 Aligned_cols=56 Identities=5% Similarity=0.000 Sum_probs=40.4
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhhhCCCC----hHHHHHH--HHHHhcCCCHHHHHHHHHHHHh
Q 046569 107 NNAACKLKLEDYSEASSLCTKVLELEPLN----VKALFRR--SQAYLKTSELEKDEADIKRALT 164 (202)
Q Consensus 107 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~----~~~~~~~--g~~~~~~~~~~~A~~~~~~a~~ 164 (202)
..|..++..|+|-+|-+.++.+....|.. ...+..+ |..+...|+. |...+.+++.
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 34666777899999999999998887643 2233333 4455567777 8999999877
No 383
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=34.35 E-value=12 Score=32.31 Aligned_cols=52 Identities=17% Similarity=0.153 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhhCCCChHHHHHHHHHHhcCCCHHH
Q 046569 103 SCYLNNAACKLKLEDYSEASSLCTKVLELEPLNVKALFRRSQAYLKTSELEK 154 (202)
Q Consensus 103 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~ 154 (202)
......|...+..|+|.-|...++.++..+|++..+...++.+|.++|.-.+
T Consensus 462 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~ 513 (668)
T 2yhe_A 462 DAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTE 513 (668)
Confidence 3445566777788999999999999999999999999999999999986554
No 384
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=28.05 E-value=1e+02 Score=24.97 Aligned_cols=30 Identities=17% Similarity=-0.031 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHhc
Q 046569 136 VKALFRRSQAYLKTSELEKDEADIKRALTI 165 (202)
Q Consensus 136 ~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l 165 (202)
..++..+|.+|..++++++|....+.++..
T Consensus 191 ~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 191 DVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 357888999999999999999999999864
No 385
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=27.86 E-value=1.8e+02 Score=21.28 Aligned_cols=63 Identities=6% Similarity=0.035 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh--hCCCChHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC
Q 046569 99 GLRLSCYLNNAACKLKLEDYSEASSLCTKVLE--LEPLNVKALFRRSQAYLKTSELEKDEADIKRALTIDP 167 (202)
Q Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~p 167 (202)
+....+|...+.. -+.+.+.|..... +....+..|...|..+...|++.+|...|+.++.-..
T Consensus 117 ~RyLklWl~Ya~~------~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A 181 (223)
T 4aez_C 117 VRYLRIWMQYVNY------IDEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKA 181 (223)
T ss_dssp HHHHHHHHHHHTT------CSCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHc------cCCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 4444455444432 1355566666654 4566788888899999999999999999999998853
No 386
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=27.66 E-value=1.1e+02 Score=18.67 Aligned_cols=28 Identities=18% Similarity=0.192 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 046569 152 LEKDEADIKRALTIDPNNRDVKLVYMEL 179 (202)
Q Consensus 152 ~~~A~~~~~~a~~l~p~~~~~~~~l~~~ 179 (202)
..+++..-..+++.+|+||...-.+...
T Consensus 26 ~~~~v~~Ai~~L~~~PsnPa~LAeyQ~k 53 (85)
T 2ca5_A 26 LQGELTLALDKLAKNPSNPQLLAEYQSK 53 (85)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 3445555555666677777665555443
No 387
>3dza_A Uncharacterized putative membrane protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=27.65 E-value=1.7e+02 Score=20.88 Aligned_cols=60 Identities=20% Similarity=0.080 Sum_probs=48.1
Q ss_pred HHHHHHhHHHHHcCcHHHHHHHHHHHHH---------hH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 046569 71 ERKKHDGNLLFRAGKYWRASKKYEKATN---------GL-RLSCYLNNAACKLKLEDYSEASSLCTKVLE 130 (202)
Q Consensus 71 ~~~~~~g~~~~~~~~~~~A~~~y~~al~---------~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 130 (202)
......+|..++.|+...|++.++-+=. |. ...-...++..++..|+|.+|-..+..+..
T Consensus 109 ~aAI~~AN~~Lk~Gd~~~A~~~LklAgvdv~~~~allPL~qT~~~V~~A~~ll~~gk~yeAn~aLk~Aed 178 (191)
T 3dza_A 109 ESAIQSANEKLAKGDQKGAIDTLRLAGIGVIENQYLMPLNQTRKAVAQSQELLKAGKYYEANLVLKGAEE 178 (191)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTTCEEEEEEEEEEHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHcCCchhhhhhhCChHhHHHHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 4556789999999999999999887744 43 344577899999999999999888777653
No 388
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=27.05 E-value=3e+02 Score=23.68 Aligned_cols=30 Identities=13% Similarity=0.155 Sum_probs=21.7
Q ss_pred HHHHHHHH--hcCCCHHHHHHHHHHHHhcCCCC
Q 046569 139 LFRRSQAY--LKTSELEKDEADIKRALTIDPNN 169 (202)
Q Consensus 139 ~~~~g~~~--~~~~~~~~A~~~~~~a~~l~p~~ 169 (202)
+..+..++ +..|+++.|++.+++ +.+-|.+
T Consensus 539 Ll~l~~f~~~~~~g~~~~AL~~i~~-L~llPl~ 570 (661)
T 2qx5_A 539 LLNISSIRELYFNKQWQETLSQMEL-LDLLPFS 570 (661)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHH-TSCSCC-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHh-CCCCCCC
Confidence 44445444 889999999999987 5566765
No 389
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=26.70 E-value=1.2e+02 Score=18.84 Aligned_cols=42 Identities=21% Similarity=0.296 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 046569 151 ELEKDEADIKRALTIDPNNRDVKLVYMELKENQREYAKYQAE 192 (202)
Q Consensus 151 ~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~ 192 (202)
...+++..-..+++.+|+||.++-.+......-.-.+..+..
T Consensus 31 ~~~~~l~~Al~~L~~~psNPa~LAe~Qa~lseynl~RNaQSn 72 (92)
T 2g0u_A 31 DLNKQLQDAQANLTKNPSDPTALANYQMIMSEYNLYRNAQSS 72 (92)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556666666778999988877776665554444444443
No 390
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=24.66 E-value=2.3e+02 Score=21.40 Aligned_cols=52 Identities=17% Similarity=0.062 Sum_probs=31.3
Q ss_pred HhcCHHHHHHHHHHHhhhCCCChH---HHHHHHHHH-hcCCCHHHHHHHHHHHHhc
Q 046569 114 KLEDYSEASSLCTKVLELEPLNVK---ALFRRSQAY-LKTSELEKDEADIKRALTI 165 (202)
Q Consensus 114 ~~~~~~~A~~~~~~al~~~p~~~~---~~~~~g~~~-~~~~~~~~A~~~~~~a~~l 165 (202)
.+.-|..|.+....-++..|.+|- ..++.+.-| .-+++.++|...-++|++-
T Consensus 171 a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 171 AVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 344566777766554544676653 223333333 3578888888888777765
No 391
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=24.20 E-value=2.6e+02 Score=22.01 Aligned_cols=85 Identities=13% Similarity=-0.045 Sum_probs=60.4
Q ss_pred HHHcCcHHHHHHHHHHHHH-------------------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh----C-CC-
Q 046569 80 LFRAGKYWRASKKYEKATN-------------------GLRLSCYLNNAACKLKLEDYSEASSLCTKVLEL----E-PL- 134 (202)
Q Consensus 80 ~~~~~~~~~A~~~y~~al~-------------------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~----~-p~- 134 (202)
.-...+..+|++....... .....+...++..|+..++...|....+++-.. + ++
T Consensus 86 ~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~ 165 (393)
T 4b4t_O 86 LKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPL 165 (393)
T ss_dssp HHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSS
T ss_pred HhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccH
Confidence 3456788999998887644 123455677888899999999999888887542 1 11
Q ss_pred --ChHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 046569 135 --NVKALFRRSQAYLKTSELEKDEADIKRALT 164 (202)
Q Consensus 135 --~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~ 164 (202)
+...|...+..+...+++..+..+.-.++.
T Consensus 166 ~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 166 RITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 234455577888889999888777666665
No 392
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=24.20 E-value=1.3e+02 Score=18.59 Aligned_cols=30 Identities=13% Similarity=0.289 Sum_probs=18.7
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhcC
Q 046569 137 KALFRRSQAYLKTSELEKDEADIKRALTID 166 (202)
Q Consensus 137 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~l~ 166 (202)
.....-|.-++..++|.+|...|+++..+.
T Consensus 54 r~~i~eak~~y~~~ny~ea~~l~~k~~n~t 83 (106)
T 2vkj_A 54 RSLIAEGKDLFETANYGEALVFFEKALNLS 83 (106)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHccc
Confidence 344445666666777777777777666554
No 393
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=24.06 E-value=1.4e+02 Score=18.96 Aligned_cols=31 Identities=13% Similarity=0.068 Sum_probs=24.0
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
..++.+.-++....+.|+|++|-....+|=+
T Consensus 18 G~ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~ 48 (105)
T 2e2a_A 18 GDARSKLLEALKAAENGDFAKADSLVVEAGS 48 (105)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3566667778888889999999888887744
No 394
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=23.50 E-value=1.5e+02 Score=18.79 Aligned_cols=31 Identities=6% Similarity=0.004 Sum_probs=23.6
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
..++.+.-++....+.|+|++|-....+|=+
T Consensus 16 G~Ars~~~eAl~~Ak~g~fe~A~~~l~eA~~ 46 (103)
T 1wcr_A 16 GQARSLAYAALKQAKQGDFAAAKAMMDQSRM 46 (103)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3466667777888888999998888877744
No 395
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=23.13 E-value=2.4e+02 Score=23.19 Aligned_cols=25 Identities=20% Similarity=0.383 Sum_probs=10.3
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHh
Q 046569 105 YLNNAACKLKLEDYSEASSLCTKVL 129 (202)
Q Consensus 105 ~~~~a~~~~~~~~~~~A~~~~~~al 129 (202)
+..+|.+|+..++|++|...+++++
T Consensus 185 ~allarv~L~~~~~~~A~~~a~~vi 209 (517)
T 3qnk_A 185 YALKSRVELYDKRYEDVIKSCAEVY 209 (517)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444444433
No 396
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=22.74 E-value=97 Score=25.32 Aligned_cols=46 Identities=11% Similarity=0.085 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhhhCCC--------ChHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 046569 119 SEASSLCTKVLELEPL--------NVKALFRRSQAYLKTSELEKDEADIKRALT 164 (202)
Q Consensus 119 ~~A~~~~~~al~~~p~--------~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~ 164 (202)
+.-+++++.|+..-|. ...++..+|.+|...+++++|....++++.
T Consensus 155 ~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 155 AQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 3456666667665442 245788899999999999999999998874
No 397
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=22.53 E-value=2.1e+02 Score=23.70 Aligned_cols=29 Identities=7% Similarity=0.066 Sum_probs=17.0
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 046569 136 VKALFRRSQAYLKTSELEKDEADIKRALT 164 (202)
Q Consensus 136 ~~~~~~~g~~~~~~~~~~~A~~~~~~a~~ 164 (202)
..++..+|.++...+++++|....+.++.
T Consensus 198 ~aA~allarv~L~~~~~~~A~~~a~~vi~ 226 (528)
T 3i4g_A 198 QAALAFLGRTCMLQKDWKSGAKAFHDIME 226 (528)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 34555556666666666666666666654
No 398
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=22.32 E-value=95 Score=25.27 Aligned_cols=31 Identities=23% Similarity=0.253 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHhhh
Q 046569 101 RLSCYLNNAACKLKLEDYSEASSLCTKVLEL 131 (202)
Q Consensus 101 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 131 (202)
...++..+|.+|+.+++|++|+..+++++..
T Consensus 196 k~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 196 KLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 4567888899999999999999999999864
No 399
>4gof_A Small glutamine-rich tetratricopeptide repeat-CON protein alpha; four-helix bundle, protein-protein interaction, UBL4A ubiqui domain; 1.35A {Homo sapiens} PDB: 4goe_A 4god_A
Probab=22.23 E-value=60 Score=17.82 Aligned_cols=19 Identities=16% Similarity=0.191 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHhcCCCCH
Q 046569 152 LEKDEADIKRALTIDPNNR 170 (202)
Q Consensus 152 ~~~A~~~~~~a~~l~p~~~ 170 (202)
.+=|++|+..++.++|++.
T Consensus 30 leVAiqCi~~aF~v~~~d~ 48 (52)
T 4gof_A 30 LEVAIQCLETAFGVTVEDS 48 (52)
T ss_dssp HHHHHHHHHHHHTCCSSCC
T ss_pred HHHHHHHHHHHcCCCcccc
Confidence 3457788888888887763
No 400
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=22.01 E-value=1.2e+02 Score=17.08 Aligned_cols=49 Identities=14% Similarity=0.049 Sum_probs=23.2
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhhhCCCC-hHHHHHHHHHHhcCCCHHHHH
Q 046569 107 NNAACKLKLEDYSEASSLCTKVLELEPLN-VKALFRRSQAYLKTSELEKDE 156 (202)
Q Consensus 107 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~~g~~~~~~~~~~~A~ 156 (202)
.+|..--.....++|....+ -++..+.. ..+-.-+...+...|+|++|+
T Consensus 11 e~AL~~TG~HcH~EA~tIA~-~L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 11 ELALAGTGHHCHQEAASIAD-WLAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp HHHHHHHTTTCHHHHHHHHH-HHHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHccchHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 33444445566677655443 24555543 334455677888888888875
No 401
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=21.52 E-value=1.7e+02 Score=18.75 Aligned_cols=31 Identities=16% Similarity=0.110 Sum_probs=24.4
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
..++.+.-++....+.|+|++|-....+|=+
T Consensus 20 G~Ars~~~eAl~~Ak~gdfe~A~~~l~eA~~ 50 (109)
T 3k1s_A 20 GNARSFAMEALQFAKQGKMAEADEAMVKAKE 50 (109)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4566777788888889999999988887744
No 402
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=20.32 E-value=1.8e+02 Score=19.00 Aligned_cols=31 Identities=19% Similarity=0.236 Sum_probs=24.5
Q ss_pred HHHHHHHHHhHHHHHcCcHHHHHHHHHHHHH
Q 046569 68 EACERKKHDGNLLFRAGKYWRASKKYEKATN 98 (202)
Q Consensus 68 ~~a~~~~~~g~~~~~~~~~~~A~~~y~~al~ 98 (202)
..|+.+.-++....+.|+|++|.....+|-+
T Consensus 35 G~ARS~~~eAl~~Ak~gdfe~A~~~l~eA~e 65 (120)
T 3l8r_A 35 GNARSIVHEAFDAMREKNYILAEQKLQEAND 65 (120)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4566677788888889999999998888744
No 403
>1xkm_A Distinctin chain A; pore-forming peptide, heterodimer, structure, homodimer, disulfide, four-helix bundle, antibiotic; NMR {Synthetic} SCOP: j.4.1.6
Probab=20.26 E-value=43 Score=14.86 Aligned_cols=14 Identities=29% Similarity=0.482 Sum_probs=10.4
Q ss_pred CcchHHHHHHhccc
Q 046569 1 NVNEGLERAIMTMK 14 (202)
Q Consensus 1 ~v~~~~~~~~~~m~ 14 (202)
+|++|+...+++++
T Consensus 4 evppgftaliktlr 17 (26)
T 1xkm_A 4 EVPPGFTALIKTLR 17 (26)
T ss_dssp CSCHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHH
Confidence 57888888777764
No 404
>3rk3_E Complexin-1; snare proteins, membrane fusion, membrane protein-exocytosis transport protein complex, membrane protein-exocytosis COMP; 3.50A {Homo sapiens} PDB: 3rl0_g
Probab=20.13 E-value=1.3e+02 Score=16.88 Aligned_cols=31 Identities=16% Similarity=0.199 Sum_probs=18.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046569 167 PNNRDVKLVYMELKENQREYAKYQAEIFGSM 197 (202)
Q Consensus 167 p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (202)
+.++.+...-......+++..++-+..|.+|
T Consensus 5 ~kdpda~kke~E~~eAlrq~Ee~Rk~Kh~kM 35 (63)
T 3rk3_E 5 SKLPDAAKKFEEAQEALRQAEEERKAKYAKM 35 (63)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566666666666666555555566655
Done!