BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046572
MSSSGAFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSD
SFSGLLLFAIGFLIFMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLR
KTVGDVLLAL

High Scoring Gene Products

Symbol, full name Information P value
AT1G53035 protein from Arabidopsis thaliana 3.1e-28
AT3G15358 protein from Arabidopsis thaliana 4.0e-26

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046572
        (130 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006180 - symbol:AT1G53035 "AT1G53035" speci...   315  3.1e-28   1
TAIR|locus:1006230226 - symbol:AT3G15358 "AT3G15358" spec...   295  4.0e-26   1


>TAIR|locus:505006180 [details] [associations]
            symbol:AT1G53035 "AT1G53035" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0007623 "circadian rhythm" evidence=RCA]
            EMBL:CP002684 EMBL:AF380658 EMBL:AY054158 EMBL:AK119066
            IPI:IPI00546618 RefSeq:NP_564621.1 UniGene:At.19104
            UniGene:At.74117 STRING:Q93VW7 EnsemblPlants:AT1G53035.1
            GeneID:841737 KEGG:ath:AT1G53035 TAIR:At1g53035
            HOGENOM:HOG000005986 InParanoid:Q93VW7 OMA:EDLAYEW PhylomeDB:Q93VW7
            ProtClustDB:CLSN2688742 Genevestigator:Q93VW7 Uniprot:Q93VW7
        Length = 150

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 63/124 (50%), Positives = 82/124 (66%)

Query:     7 FVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSDXXXXXX 66
             F VIC+LHS+IALTSG LMMF  ++      G+E A+KL GS PHD+LLI+ S       
Sbjct:    12 FRVICILHSIIALTSGTLMMFYTEKASIFGPGSEIASKLKGSTPHDELLIQISQSFSGLL 71

Query:    67 XXXXXXXXXMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLRKTVGDV 126
                      MVSFVKDKEF SFFA G V+L + MA WRV FE ++E LA++W ++ +GD+
Sbjct:    72 LFAIGLVLFMVSFVKDKEFHSFFAGGSVILYVLMAMWRVLFEWKIEDLAYEWPKQALGDI 131

Query:   127 LLAL 130
              LA+
Sbjct:   132 ALAI 135


>TAIR|locus:1006230226 [details] [associations]
            symbol:AT3G15358 "AT3G15358" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP000413
            HOGENOM:HOG000005986 ProtClustDB:CLSN2688742 EMBL:BT006142
            EMBL:BT008544 EMBL:AK229695 IPI:IPI00532788 RefSeq:NP_974320.1
            UniGene:At.46974 EnsemblPlants:AT3G15358.1 GeneID:2745884
            KEGG:ath:AT3G15358 TAIR:At3g15358 eggNOG:NOG279483
            InParanoid:Q9LJR0 OMA:EDLAFEC PhylomeDB:Q9LJR0
            Genevestigator:Q9LJR0 Uniprot:Q9LJR0
        Length = 144

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 61/128 (47%), Positives = 82/128 (64%)

Query:     3 SSGAFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSDXX 62
             +S  F VIC+LHS+IALTSG LMMF  ++     HG++ A KL GS PHD+ LI+ S   
Sbjct:     2 NSYLFRVICILHSIIALTSGTLMMFYTEKASIFGHGSDIANKLKGSTPHDEQLIQISQSF 61

Query:    63 XXXXXXXXXXXXXMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLRKT 122
                          MVSFVKD+EF SFFA G V+L + MA WRV FE ++E LA++  ++ 
Sbjct:    62 SGLLLFAIGLVLFMVSFVKDREFHSFFAAGSVILYMVMALWRVMFEWKIEDLAFECPKQA 121

Query:   123 VGDVLLAL 130
             +GD+ LA+
Sbjct:   122 LGDIALAV 129


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.137   0.418    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      130       115   0.00091  102 3  11 22  0.36    30
                                                     29  0.45    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  595 (63 KB)
  Total size of DFA:  129 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.88u 0.14s 9.02t   Elapsed:  00:00:00
  Total cpu time:  8.88u 0.14s 9.02t   Elapsed:  00:00:00
  Start:  Mon May 20 18:08:25 2013   End:  Mon May 20 18:08:25 2013

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