Query 046572
Match_columns 130
No_of_seqs 23 out of 25
Neff 1.8
Searched_HMMs 13730
Date Mon Mar 25 23:51:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046572.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/046572hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lghb_ f.3.1.1 (B:) Light-har 42.9 6.3 0.00046 23.2 1.9 22 83-104 12-40 (43)
2 d1c7qa_ c.80.1.2 (A:) Phosphog 42.9 3 0.00022 32.2 0.6 29 19-54 385-413 (442)
3 d1mbaa_ a.1.1.2 (A:) Myoglobin 42.0 4.2 0.00031 25.3 1.1 41 49-91 3-45 (146)
4 d1iata_ c.80.1.2 (A:) Phosphog 38.8 3.5 0.00025 33.2 0.4 19 18-36 483-501 (556)
5 d1jo5a_ f.3.1.1 (A:) Light-har 37.2 4.7 0.00034 24.3 0.7 24 83-106 17-47 (48)
6 d1q50a_ c.80.1.2 (A:) Phosphog 36.5 3.9 0.00028 33.1 0.3 19 18-36 491-509 (561)
7 d1itha_ a.1.1.2 (A:) Hemoglobi 35.8 6.6 0.00048 25.4 1.3 44 47-90 1-45 (141)
8 d3d1ka1 a.1.1.2 (A:1-142) Hemo 18.0 23 0.0017 22.2 1.4 25 67-91 21-45 (142)
9 d2iafa1 d.81.2.1 (A:4-148) L-s 17.9 25 0.0019 23.7 1.7 18 35-52 43-62 (145)
10 d1lhta_ a.1.1.2 (A:) Myoglobin 16.8 27 0.002 22.0 1.5 25 67-91 21-45 (153)
No 1
>d1lghb_ f.3.1.1 (B:) Light-harvesting complex subunits {Rhodospirillum molischianum [TaxId: 1083]}
Probab=42.94 E-value=6.3 Score=23.21 Aligned_cols=22 Identities=14% Similarity=0.344 Sum_probs=16.0
Q ss_pred hhhhhhhhhh-------hHhHHHHHHHHH
Q 046572 83 KEFQSFFAKG-------CVVLLIFMASWR 104 (130)
Q Consensus 83 refqsFfakg-------c~~Lhv~mA~WR 104 (130)
+||++.|-+| +++-|+..-+||
T Consensus 12 ~EfH~~~~~g~~~F~~iAvvAHiLvw~wr 40 (43)
T d1lghb_ 12 IAVHDQFKTTFSAFIILAAVAHVLVWVWK 40 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4666666555 677899988887
No 2
>d1c7qa_ c.80.1.2 (A:) Phosphoglucose isomerase, PGI {Bacillus stearothermophilus [TaxId: 1422]}
Probab=42.88 E-value=3 Score=32.15 Aligned_cols=29 Identities=38% Similarity=0.427 Sum_probs=22.8
Q ss_pred HhhchhhheeehhhhhcccchHHHHHhhCCCcccch
Q 046572 19 LTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQL 54 (130)
Q Consensus 19 lT~G~LMmFy~kei~vfgHG~etA~KL~GSTPhDqL 54 (130)
-|.|.||++|..++.+.| .|.|-.|-||-
T Consensus 385 ~~LG~Li~~~E~~t~~~g-------~l~~INpFDQp 413 (442)
T d1c7qa_ 385 YTFGEMVYFFEKACGISG-------HLLGVNPFDQP 413 (442)
T ss_dssp HHHHHHHHHHHHHHHHHH-------HHHTSCTTCCT
T ss_pred HHHHHHHHHHHHHHHHHH-------HhhCCCCCCCh
Confidence 578999999998887765 57777777774
No 3
>d1mbaa_ a.1.1.2 (A:) Myoglobin {Slug sea hare (Aplysia limacina) [TaxId: 6502]}
Probab=42.03 E-value=4.2 Score=25.35 Aligned_cols=41 Identities=22% Similarity=0.226 Sum_probs=28.8
Q ss_pred CcccchheeccccchhH--HHHHHHHHHHHHHhhcchhhhhhhhh
Q 046572 49 NPHDQLLIRTSDSFSGL--LLFAIGFLIFMVSFVKDKEFQSFFAK 91 (130)
Q Consensus 49 TPhDqLLI~tSdSFsGL--LLFaIGfllfMVafVkdrefqsFfak 91 (130)
||+|+-+||.| +.-+ =.-.+|--+|---|-+++|.|.+|.+
T Consensus 3 s~~~~~~v~~s--W~~v~~~~~~~g~~if~~lF~~~P~~~~~F~~ 45 (146)
T d1mbaa_ 3 SAAEADLAGKS--WAPVFANKNANGLDFLVALFEKFPDSANFFAD 45 (146)
T ss_dssp CHHHHHHHHHH--HHHHHHTHHHHHHHHHHHHHHHCGGGGGGCTT
T ss_pred CHHHHHHHHHH--HHHHHccHHHHHHHHHHHHHHHCHHHHHHhhh
Confidence 56677777644 2221 12457888888999999999999964
No 4
>d1iata_ c.80.1.2 (A:) Phosphoglucose isomerase, PGI {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.79 E-value=3.5 Score=33.25 Aligned_cols=19 Identities=21% Similarity=0.338 Sum_probs=16.6
Q ss_pred HHhhchhhheeehhhhhcc
Q 046572 18 ALTSGALMMFKMKEIYTLT 36 (130)
Q Consensus 18 AlT~G~LMmFy~kei~vfg 36 (130)
+-|.|+||++|..++.+-|
T Consensus 483 ~~~LG~Lial~E~~t~v~g 501 (556)
T d1iata_ 483 PFMLGALVAMYEHKIFVQG 501 (556)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3579999999999998877
No 5
>d1jo5a_ f.3.1.1 (A:) Light-harvesting complex subunits {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=37.22 E-value=4.7 Score=24.25 Aligned_cols=24 Identities=21% Similarity=0.487 Sum_probs=17.1
Q ss_pred hhhhhhhhh-------hhHhHHHHHHHHHHH
Q 046572 83 KEFQSFFAK-------GCVVLLIFMASWRVY 106 (130)
Q Consensus 83 refqsFfak-------gc~~Lhv~mA~WR~~ 106 (130)
+||++.|-. -+++-|+..-+||=.
T Consensus 17 ~E~H~~~~~g~~~F~~iAvvAH~L~w~wrPW 47 (48)
T d1jo5a_ 17 QELHSVYMSGLWLFSAVAIVAHLAVYIWRPW 47 (48)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 456666544 478889999999844
No 6
>d1q50a_ c.80.1.2 (A:) Phosphoglucose isomerase, PGI {Leishmania mexicana [TaxId: 5665]}
Probab=36.55 E-value=3.9 Score=33.13 Aligned_cols=19 Identities=11% Similarity=0.176 Sum_probs=16.1
Q ss_pred HHhhchhhheeehhhhhcc
Q 046572 18 ALTSGALMMFKMKEIYTLT 36 (130)
Q Consensus 18 AlT~G~LMmFy~kei~vfg 36 (130)
+-|.|+||++|..++.+-|
T Consensus 491 p~~lG~Lial~E~~t~v~g 509 (561)
T d1q50a_ 491 PRALGAIIAMYEHKVLVQG 509 (561)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3578999999999888866
No 7
>d1itha_ a.1.1.2 (A:) Hemoglobin {Innkeeper worm (Urechis caupo) [TaxId: 6431]}
Probab=35.77 E-value=6.6 Score=25.38 Aligned_cols=44 Identities=18% Similarity=-0.014 Sum_probs=32.9
Q ss_pred CCCcccchheeccc-cchhHHHHHHHHHHHHHHhhcchhhhhhhh
Q 046572 47 GSNPHDQLLIRTSD-SFSGLLLFAIGFLIFMVSFVKDKEFQSFFA 90 (130)
Q Consensus 47 GSTPhDqLLI~tSd-SFsGLLLFaIGfllfMVafVkdrefqsFfa 90 (130)
|=|+.|.-+||-|= ....-=.-++|--+|+--|-+.+|.|.+|.
T Consensus 1 GLT~~q~~~i~~sW~~~~~~~~~~~g~~~f~~lF~~~P~~~~~F~ 45 (141)
T d1itha_ 1 GLTAAQIKAIQDHWFLNIKGCLQAAADSIFFKYLTAYPGDLAFFH 45 (141)
T ss_dssp CCCHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHHHSGGGGGGCT
T ss_pred CcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHhh
Confidence 45677777777662 222223567899999999999999999996
No 8
>d3d1ka1 a.1.1.2 (A:1-142) Hemoglobin, alpha-chain {Antarctic fish (Trematomus newnesi) [TaxId: 35730]}
Probab=18.03 E-value=23 Score=22.18 Aligned_cols=25 Identities=20% Similarity=0.109 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhhcchhhhhhhhh
Q 046572 67 LFAIGFLIFMVSFVKDKEFQSFFAK 91 (130)
Q Consensus 67 LFaIGfllfMVafVkdrefqsFfak 91 (130)
...+|--+|.--|.+++|.|.+|.+
T Consensus 21 ~~~~g~~~~~rlF~~~P~~~~~F~~ 45 (142)
T d3d1ka1 21 SDAIGNDALSRMIVVYPQTKIYFSH 45 (142)
T ss_dssp HHHHHHHHHHHHHHHSGGGGGGGTT
T ss_pred HHHHHHHHHHHHHHHChhHHHhhhh
Confidence 4568999999999999999999964
No 9
>d2iafa1 d.81.2.1 (A:4-148) L-serine dehydratase SdhL, N-terminal domain {Legionella pneumophila [TaxId: 446]}
Probab=17.95 E-value=25 Score=23.67 Aligned_cols=18 Identities=28% Similarity=0.407 Sum_probs=14.4
Q ss_pred cccchHHHHH--hhCCCccc
Q 046572 35 LTHGAETATK--LLGSNPHD 52 (130)
Q Consensus 35 fgHG~etA~K--L~GSTPhD 52 (130)
-|||++.|-. |+|-.|.+
T Consensus 43 ~GHgTD~Av~~GL~G~~P~~ 62 (145)
T d2iafa1 43 KGHGTDKAILNGLENKAPET 62 (145)
T ss_dssp TTSSHHHHHHHHTTTCCCC-
T ss_pred CccCccHHHHhhccCCCccc
Confidence 4899999975 68988875
No 10
>d1lhta_ a.1.1.2 (A:) Myoglobin {Loggerhead sea turtle (Caretta caretta) [TaxId: 8467]}
Probab=16.83 E-value=27 Score=21.99 Aligned_cols=25 Identities=36% Similarity=0.295 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhhcchhhhhhhhh
Q 046572 67 LFAIGFLIFMVSFVKDKEFQSFFAK 91 (130)
Q Consensus 67 LFaIGfllfMVafVkdrefqsFfak 91 (130)
.-.+|--+|.--|.+++|.|++|.+
T Consensus 21 ~~~~g~~~f~rlF~~~P~~~~~F~~ 45 (153)
T d1lhta_ 21 LSAHGQEVIIRLFQLHPETQERFAK 45 (153)
T ss_dssp HHHHHHHHHHHHHHHCGGGGGGCGG
T ss_pred HHHHHHHHHHHHHHHChHHHHHhhh
Confidence 3578999999999999999999964
Done!