Query 046574
Match_columns 104
No_of_seqs 110 out of 1155
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 23:53:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046574.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046574hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a3u_A NCR, NADH\:flavin oxido 99.9 5.4E-23 1.9E-27 159.4 10.8 84 11-95 275-358 (358)
2 4gbu_A NADPH dehydrogenase 1; 99.9 3.6E-23 1.2E-27 162.4 6.2 83 13-96 309-392 (400)
3 4ab4_A Xenobiotic reductase B; 99.9 5.4E-22 1.8E-26 154.6 10.3 88 12-100 269-356 (362)
4 3gka_A N-ethylmaleimide reduct 99.9 1.1E-21 3.9E-26 152.7 10.2 83 12-95 277-359 (361)
5 2hsa_B 12-oxophytodienoate red 99.8 4.8E-21 1.7E-25 150.7 10.5 82 13-95 310-392 (402)
6 2r14_A Morphinone reductase; H 99.8 8.6E-21 2.9E-25 148.2 11.1 84 12-96 289-372 (377)
7 3aty_A Tcoye, prostaglandin F2 99.8 9.5E-21 3.2E-25 148.1 10.0 80 14-94 299-378 (379)
8 2gou_A Oxidoreductase, FMN-bin 99.8 1.9E-20 6.4E-25 145.5 11.0 82 12-94 283-364 (365)
9 1vyr_A Pentaerythritol tetrani 99.8 2.6E-20 8.9E-25 144.7 10.8 81 12-93 284-364 (364)
10 1icp_A OPR1, 12-oxophytodienoa 99.8 2.2E-20 7.4E-25 145.8 10.3 83 12-95 291-374 (376)
11 3tjl_A NADPH dehydrogenase; OL 99.8 1.9E-20 6.4E-25 148.0 6.3 82 13-95 304-389 (407)
12 3gr7_A NADPH dehydrogenase; fl 99.4 2.7E-13 9.2E-18 104.3 8.6 63 12-74 267-330 (340)
13 3hgj_A Chromate reductase; TIM 99.4 8.7E-13 3E-17 101.6 8.1 61 12-72 278-339 (349)
14 3kru_A NADH:flavin oxidoreduct 99.4 5.9E-13 2E-17 102.8 6.9 56 12-68 267-323 (343)
15 1z41_A YQJM, probable NADH-dep 99.4 1.4E-12 4.8E-17 99.9 7.2 59 12-70 267-326 (338)
16 3l5l_A Xenobiotic reductase A; 99.3 1.8E-12 6E-17 100.4 7.1 59 12-70 285-344 (363)
17 3k30_A Histamine dehydrogenase 99.3 8.2E-13 2.8E-17 108.4 5.2 58 12-69 284-342 (690)
18 3l5a_A NADH/flavin oxidoreduct 99.3 2.6E-12 8.8E-17 101.6 6.1 56 12-69 306-364 (419)
19 1o94_A Tmadh, trimethylamine d 99.3 2.7E-12 9.2E-17 106.2 6.3 59 12-70 281-340 (729)
20 1ps9_A 2,4-dienoyl-COA reducta 99.2 1.1E-11 3.7E-16 101.3 6.1 58 12-69 270-328 (671)
21 1f76_A Dihydroorotate dehydrog 99.0 7.2E-10 2.5E-14 84.1 5.9 55 12-67 277-335 (336)
22 3b0p_A TRNA-dihydrouridine syn 98.9 2.7E-09 9.2E-14 82.2 5.6 55 12-68 186-242 (350)
23 2e6f_A Dihydroorotate dehydrog 98.8 7.5E-09 2.6E-13 77.7 6.4 56 12-68 233-291 (314)
24 1ep3_A Dihydroorotate dehydrog 98.8 7.5E-09 2.6E-13 77.0 5.9 56 12-68 231-287 (311)
25 1vhn_A Putative flavin oxidore 98.8 3E-09 1E-13 80.5 3.7 52 13-66 176-228 (318)
26 1jub_A Dihydroorotate dehydrog 98.7 1.4E-08 4.8E-13 76.1 6.3 55 13-68 231-289 (311)
27 1tv5_A Dhodehase, dihydroorota 98.6 5.2E-08 1.8E-12 77.6 6.2 55 13-68 362-420 (443)
28 3tdn_A FLR symmetric alpha-bet 98.6 8.6E-08 2.9E-12 69.6 6.6 54 12-66 69-123 (247)
29 3oix_A Putative dihydroorotate 98.4 3.2E-07 1.1E-11 70.9 6.3 55 13-68 264-322 (345)
30 4ef8_A Dihydroorotate dehydrog 98.4 4.2E-07 1.4E-11 70.5 6.0 55 13-68 267-324 (354)
31 3tdn_A FLR symmetric alpha-bet 98.4 4.1E-08 1.4E-12 71.4 0.0 54 13-67 191-245 (247)
32 3zwt_A Dihydroorotate dehydrog 98.4 6.4E-07 2.2E-11 69.6 6.7 56 12-68 286-345 (367)
33 3i65_A Dihydroorotate dehydrog 98.4 4.3E-07 1.5E-11 71.9 5.3 55 13-68 334-392 (415)
34 2z6i_A Trans-2-enoyl-ACP reduc 98.3 1.6E-06 5.6E-11 65.8 6.5 57 12-69 152-215 (332)
35 1ka9_F Imidazole glycerol phos 98.2 2.5E-06 8.5E-11 61.6 6.6 55 13-68 66-121 (252)
36 1thf_D HISF protein; thermophI 98.1 6.2E-06 2.1E-10 59.5 6.8 54 13-67 65-119 (253)
37 1h5y_A HISF; histidine biosynt 98.1 8.5E-06 2.9E-10 57.9 7.1 55 12-67 67-122 (253)
38 3vk5_A MOEO5; TIM barrel, tran 98.1 5.3E-06 1.8E-10 62.9 6.0 56 12-68 215-275 (286)
39 2y88_A Phosphoribosyl isomeras 98.0 1.1E-05 3.9E-10 57.8 6.8 54 12-66 64-118 (244)
40 2y88_A Phosphoribosyl isomeras 98.0 8.4E-06 2.9E-10 58.5 5.9 54 12-66 183-240 (244)
41 1vzw_A Phosphoribosyl isomeras 98.0 1.3E-05 4.3E-10 57.7 6.8 55 12-67 65-120 (244)
42 3bw2_A 2-nitropropane dioxygen 98.0 1E-05 3.4E-10 62.1 6.2 49 12-61 198-247 (369)
43 1qo2_A Molecule: N-((5-phospho 98.0 1.1E-05 3.8E-10 58.1 5.7 52 13-67 65-117 (241)
44 1gte_A Dihydropyrimidine dehyd 98.0 1.6E-05 5.3E-10 68.2 7.1 55 13-68 777-834 (1025)
45 2gjl_A Hypothetical protein PA 97.9 2.3E-05 7.8E-10 59.1 7.1 56 13-69 163-225 (328)
46 1y0e_A Putative N-acetylmannos 97.9 2.1E-05 7.1E-10 55.8 6.2 50 13-64 166-216 (223)
47 1vcf_A Isopentenyl-diphosphate 97.9 1.2E-05 3.9E-10 61.1 4.9 45 13-58 246-292 (332)
48 3tjx_A Dihydroorotate dehydrog 97.9 2.5E-05 8.5E-10 59.7 6.7 52 16-68 270-324 (354)
49 3vzx_A Heptaprenylglyceryl pho 97.9 2.5E-05 8.6E-10 57.4 6.5 54 11-66 168-223 (228)
50 1vrd_A Inosine-5'-monophosphat 97.9 1.6E-05 5.5E-10 63.0 5.2 43 21-64 339-382 (494)
51 1jcn_A Inosine monophosphate d 97.9 1.4E-05 4.7E-10 63.9 4.7 48 13-61 349-397 (514)
52 1ka9_F Imidazole glycerol phos 97.8 4.7E-05 1.6E-09 54.8 7.1 52 12-64 186-238 (252)
53 1thf_D HISF protein; thermophI 97.7 8.6E-05 3E-09 53.4 7.0 50 12-62 185-236 (253)
54 1vzw_A Phosphoribosyl isomeras 97.7 6.5E-05 2.2E-09 54.0 6.3 52 12-64 180-235 (244)
55 1viz_A PCRB protein homolog; s 97.7 4.4E-05 1.5E-09 56.3 5.5 52 12-65 171-225 (240)
56 1yad_A Regulatory protein TENI 97.7 6.8E-05 2.3E-09 53.3 6.3 51 13-64 155-205 (221)
57 2w6r_A Imidazole glycerol phos 97.7 2.9E-05 9.9E-10 56.4 4.3 54 12-66 190-244 (266)
58 1eep_A Inosine 5'-monophosphat 97.7 4.9E-05 1.7E-09 59.0 5.3 48 14-62 245-296 (404)
59 1qo2_A Molecule: N-((5-phospho 97.7 0.00012 4E-09 52.7 6.7 54 12-65 178-237 (241)
60 3f4w_A Putative hexulose 6 pho 97.6 0.0001 3.5E-09 51.7 5.9 52 12-64 148-200 (211)
61 3w01_A Heptaprenylglyceryl pho 97.6 8.2E-05 2.8E-09 54.9 5.3 54 11-66 174-229 (235)
62 1xi3_A Thiamine phosphate pyro 97.6 0.00011 3.9E-09 51.3 5.6 51 13-64 153-203 (215)
63 2nli_A Lactate oxidase; flavoe 97.6 0.00011 3.8E-09 56.8 5.8 45 12-57 272-319 (368)
64 1h5y_A HISF; histidine biosynt 97.6 0.00024 8.4E-09 50.2 7.1 52 12-64 188-240 (253)
65 1p0k_A Isopentenyl-diphosphate 97.6 0.00015 5.2E-09 55.1 6.4 45 13-58 241-287 (349)
66 3o07_A Pyridoxine biosynthesis 97.5 0.00012 4.1E-09 55.5 5.4 49 12-61 188-239 (291)
67 1yxy_A Putative N-acetylmannos 97.5 0.00015 5.3E-09 51.7 5.6 47 12-61 177-224 (234)
68 1ypf_A GMP reductase; GUAC, pu 97.5 0.00015 5.1E-09 55.2 5.4 44 13-57 201-245 (336)
69 1xm3_A Thiazole biosynthesis p 97.4 0.00041 1.4E-08 51.2 7.0 49 11-60 167-216 (264)
70 1p4c_A L(+)-mandelate dehydrog 97.4 0.00017 5.7E-09 56.0 5.1 46 12-58 268-314 (380)
71 3ajx_A 3-hexulose-6-phosphate 97.4 0.00026 8.7E-09 49.5 5.6 48 15-63 149-198 (207)
72 2tps_A Protein (thiamin phosph 97.4 0.00021 7.3E-09 50.4 5.1 51 12-63 161-212 (227)
73 2nzl_A Hydroxyacid oxidase 1; 97.4 0.00026 8.8E-09 55.3 5.9 46 12-58 295-343 (392)
74 3bo9_A Putative nitroalkan dio 97.4 0.00029 9.8E-09 53.4 6.0 46 13-59 167-213 (326)
75 1gox_A (S)-2-hydroxy-acid oxid 97.4 0.00029 9.8E-09 54.4 5.9 44 13-57 269-315 (370)
76 3sgz_A Hydroxyacid oxidase 2; 97.3 0.00036 1.2E-08 54.1 6.1 45 12-57 260-307 (352)
77 1wa3_A 2-keto-3-deoxy-6-phosph 97.3 0.00023 8E-09 49.7 4.7 46 13-60 140-186 (205)
78 1kbi_A Cytochrome B2, L-LCR; f 97.3 0.00028 9.7E-09 56.8 5.7 45 13-58 387-439 (511)
79 1rpx_A Protein (ribulose-phosp 97.3 0.00039 1.3E-08 49.5 5.8 51 13-64 165-220 (230)
80 1h1y_A D-ribulose-5-phosphate 97.3 0.00042 1.4E-08 49.7 5.8 51 13-64 163-214 (228)
81 4gj1_A 1-(5-phosphoribosyl)-5- 97.3 0.00042 1.4E-08 50.6 5.9 54 12-66 65-119 (243)
82 2w6r_A Imidazole glycerol phos 97.3 0.00019 6.7E-09 52.0 4.0 55 12-67 64-122 (266)
83 2qr6_A IMP dehydrogenase/GMP r 97.3 0.00045 1.5E-08 53.3 5.9 36 23-59 278-314 (393)
84 3r2g_A Inosine 5'-monophosphat 97.3 0.00048 1.6E-08 53.5 5.9 50 13-63 188-240 (361)
85 2f6u_A GGGPS, (S)-3-O-geranylg 97.2 0.00039 1.3E-08 51.1 5.1 47 12-60 179-227 (234)
86 2nv1_A Pyridoxal biosynthesis 97.2 0.00034 1.2E-08 52.3 4.9 47 12-59 197-246 (305)
87 2fli_A Ribulose-phosphate 3-ep 97.2 0.00058 2E-08 48.0 5.8 50 14-64 157-211 (220)
88 2yzr_A Pyridoxal biosynthesis 97.2 0.00057 1.9E-08 52.7 6.0 47 12-59 230-279 (330)
89 1jvn_A Glutamine, bifunctional 97.2 0.00072 2.5E-08 54.7 6.8 54 12-65 486-540 (555)
90 3vkj_A Isopentenyl-diphosphate 97.2 0.00063 2.1E-08 52.8 6.2 43 13-56 257-301 (368)
91 3q58_A N-acetylmannosamine-6-p 97.2 0.00052 1.8E-08 49.8 5.2 49 12-63 172-221 (229)
92 3khj_A Inosine-5-monophosphate 97.2 0.00032 1.1E-08 54.2 4.0 45 20-65 205-250 (361)
93 3igs_A N-acetylmannosamine-6-p 97.1 0.00084 2.9E-08 48.8 5.6 48 12-62 172-220 (232)
94 1mzh_A Deoxyribose-phosphate a 97.1 0.00095 3.2E-08 48.1 5.7 42 12-54 163-207 (225)
95 2c6q_A GMP reductase 2; TIM ba 97.0 0.00083 2.8E-08 51.6 5.3 38 21-59 222-260 (351)
96 3kts_A Glycerol uptake operon 97.0 0.00075 2.6E-08 48.4 4.7 44 11-55 139-183 (192)
97 2agk_A 1-(5-phosphoribosyl)-5- 97.0 0.00098 3.3E-08 49.2 5.5 46 12-58 191-245 (260)
98 3o63_A Probable thiamine-phosp 97.0 0.00077 2.6E-08 49.5 4.9 52 13-65 180-233 (243)
99 2v82_A 2-dehydro-3-deoxy-6-pho 97.0 0.00043 1.5E-08 48.7 3.3 45 12-57 136-182 (212)
100 2zbt_A Pyridoxal biosynthesis 97.0 0.001 3.6E-08 49.2 5.3 46 13-59 198-246 (297)
101 4fo4_A Inosine 5'-monophosphat 96.9 0.001 3.6E-08 51.6 5.0 43 20-63 209-252 (366)
102 4adt_A Pyridoxine biosynthetic 96.9 0.0018 6.2E-08 49.0 6.2 49 12-61 197-248 (297)
103 3cwo_X Beta/alpha-barrel prote 96.9 0.0023 8E-08 44.1 6.3 53 13-66 165-218 (237)
104 3qja_A IGPS, indole-3-glycerol 96.9 0.0027 9.3E-08 47.3 7.0 53 12-65 201-256 (272)
105 2qjg_A Putative aldolase MJ040 96.9 0.0035 1.2E-07 45.5 7.3 52 12-64 192-250 (273)
106 1tqj_A Ribulose-phosphate 3-ep 96.8 0.0017 5.7E-08 46.9 5.3 52 12-64 158-214 (230)
107 3ceu_A Thiamine phosphate pyro 96.8 0.0014 4.9E-08 46.4 4.7 46 13-59 133-180 (210)
108 2yw3_A 4-hydroxy-2-oxoglutarat 96.8 0.0016 5.6E-08 46.4 4.8 47 12-60 140-187 (207)
109 3ffs_A Inosine-5-monophosphate 96.8 0.002 6.8E-08 50.6 5.6 49 14-63 235-287 (400)
110 1vc4_A Indole-3-glycerol phosp 96.7 0.0024 8.1E-08 47.0 5.5 51 13-65 194-250 (254)
111 1wv2_A Thiazole moeity, thiazo 96.7 0.0045 1.5E-07 46.4 6.8 47 12-59 177-226 (265)
112 1q6o_A Humps, 3-keto-L-gulonat 96.7 0.0014 4.7E-08 46.5 3.7 48 12-60 151-200 (216)
113 3ovp_A Ribulose-phosphate 3-ep 96.6 0.004 1.4E-07 45.1 6.0 51 14-65 160-211 (228)
114 3jr2_A Hexulose-6-phosphate sy 96.6 0.00058 2E-08 48.6 1.2 48 12-60 154-203 (218)
115 1tqx_A D-ribulose-5-phosphate 96.6 0.0091 3.1E-07 43.3 7.6 51 13-64 163-214 (227)
116 3tsm_A IGPS, indole-3-glycerol 96.6 0.0078 2.7E-07 45.0 7.3 53 13-66 209-264 (272)
117 4avf_A Inosine-5'-monophosphat 96.6 0.0027 9.3E-08 50.7 5.0 47 14-61 321-371 (490)
118 4fxs_A Inosine-5'-monophosphat 96.5 0.0033 1.1E-07 50.2 5.2 40 21-61 333-373 (496)
119 1zfj_A Inosine monophosphate d 96.5 0.0036 1.2E-07 49.3 5.3 41 20-61 334-375 (491)
120 1geq_A Tryptophan synthase alp 96.5 0.0067 2.3E-07 43.3 6.3 44 13-57 182-226 (248)
121 2czd_A Orotidine 5'-phosphate 96.5 0.0062 2.1E-07 42.9 6.0 50 12-62 144-196 (208)
122 3sr7_A Isopentenyl-diphosphate 96.5 0.0028 9.5E-08 49.2 4.4 34 22-56 278-312 (365)
123 1jvn_A Glutamine, bifunctional 96.4 0.0042 1.4E-07 50.3 5.4 52 14-66 319-395 (555)
124 3usb_A Inosine-5'-monophosphat 96.4 0.0036 1.2E-07 50.2 5.0 41 20-61 357-398 (511)
125 1rd5_A Tryptophan synthase alp 96.4 0.0083 2.8E-07 43.5 6.3 43 13-56 192-235 (262)
126 3nav_A Tryptophan synthase alp 96.3 0.0075 2.6E-07 45.0 5.9 43 12-55 198-241 (271)
127 2h6r_A Triosephosphate isomera 96.3 0.013 4.4E-07 41.9 6.9 55 10-65 157-213 (219)
128 1qop_A Tryptophan synthase alp 96.2 0.01 3.5E-07 43.5 6.2 44 12-56 195-239 (268)
129 2cu0_A Inosine-5'-monophosphat 96.2 0.0059 2E-07 48.3 5.2 43 15-58 321-364 (486)
130 2htm_A Thiazole biosynthesis p 96.2 0.013 4.5E-07 44.0 6.7 44 12-56 166-212 (268)
131 2ekc_A AQ_1548, tryptophan syn 96.1 0.014 4.7E-07 42.8 6.3 44 12-57 196-240 (262)
132 3vnd_A TSA, tryptophan synthas 96.0 0.012 4E-07 43.8 5.6 43 12-55 196-239 (267)
133 1eix_A Orotidine 5'-monophosph 96.0 0.009 3.1E-07 43.4 4.7 50 14-64 173-234 (245)
134 1wbh_A KHG/KDPG aldolase; lyas 95.9 0.0032 1.1E-07 45.2 2.2 47 11-58 144-191 (214)
135 1ujp_A Tryptophan synthase alp 95.9 0.013 4.5E-07 43.4 5.6 43 12-57 192-235 (271)
136 2agk_A 1-(5-phosphoribosyl)-5- 95.9 0.004 1.4E-07 45.9 2.6 52 12-66 66-123 (260)
137 1me8_A Inosine-5'-monophosphat 95.9 0.012 4.3E-07 46.8 5.7 36 22-58 352-388 (503)
138 3inp_A D-ribulose-phosphate 3- 95.9 0.011 3.8E-07 43.5 5.0 41 23-64 196-236 (246)
139 1vhc_A Putative KHG/KDPG aldol 95.8 0.0042 1.4E-07 45.0 2.2 45 11-56 145-190 (224)
140 2yyu_A Orotidine 5'-phosphate 95.7 0.013 4.3E-07 42.6 4.5 50 14-64 167-228 (246)
141 1dbt_A Orotidine 5'-phosphate 95.6 0.01 3.4E-07 42.9 3.6 51 12-63 164-226 (239)
142 3cu2_A Ribulose-5-phosphate 3- 95.6 0.032 1.1E-06 40.7 6.3 49 13-63 173-228 (237)
143 3ctl_A D-allulose-6-phosphate 95.5 0.018 6.1E-07 41.8 4.8 45 14-59 154-204 (231)
144 4a29_A Engineered retro-aldol 95.5 0.041 1.4E-06 41.0 6.7 55 13-68 193-250 (258)
145 3exr_A RMPD (hexulose-6-phosph 95.5 0.012 4.2E-07 42.2 3.7 50 12-62 156-207 (221)
146 1w8s_A FBP aldolase, fructose- 95.4 0.035 1.2E-06 40.8 6.1 52 12-64 185-244 (263)
147 3ve9_A Orotidine-5'-phosphate 95.4 0.018 6E-07 41.5 4.4 53 11-64 139-193 (215)
148 3tha_A Tryptophan synthase alp 95.3 0.024 8.1E-07 42.0 4.9 42 12-55 189-231 (252)
149 3lab_A Putative KDPG (2-keto-3 95.0 0.017 5.9E-07 42.0 3.4 49 11-61 147-196 (217)
150 3nl6_A Thiamine biosynthetic b 94.9 0.037 1.3E-06 44.8 5.4 51 12-63 157-221 (540)
151 1mxs_A KDPG aldolase; 2-keto-3 94.9 0.016 5.4E-07 41.9 2.8 44 12-56 155-199 (225)
152 1vkf_A Glycerol uptake operon 94.7 0.034 1.2E-06 39.6 4.3 39 15-55 142-181 (188)
153 2uva_G Fatty acid synthase bet 94.5 0.029 9.8E-07 51.8 4.1 55 13-68 746-818 (2060)
154 2pgw_A Muconate cycloisomerase 94.4 0.096 3.3E-06 39.9 6.4 48 12-59 231-279 (384)
155 4dbe_A Orotidine 5'-phosphate 94.3 0.046 1.6E-06 39.4 4.1 50 12-62 147-198 (222)
156 1x1o_A Nicotinate-nucleotide p 94.2 0.1 3.5E-06 39.1 6.0 41 15-56 231-273 (286)
157 1vqt_A Orotidine 5'-phosphate 94.1 0.08 2.7E-06 37.8 5.0 50 12-64 146-205 (213)
158 4e38_A Keto-hydroxyglutarate-a 94.0 0.029 9.9E-07 41.0 2.6 48 11-60 162-210 (232)
159 2b7n_A Probable nicotinate-nuc 94.0 0.05 1.7E-06 40.3 4.0 35 23-58 230-264 (273)
160 1ea0_A Glutamate synthase [NAD 93.8 0.1 3.5E-06 46.9 6.1 34 22-56 1064-1098(1479)
161 1i4n_A Indole-3-glycerol phosp 93.7 0.094 3.2E-06 38.6 4.8 51 13-65 191-244 (251)
162 1ofd_A Ferredoxin-dependent gl 93.6 0.11 3.9E-06 46.8 6.0 34 22-56 1099-1133(1520)
163 2rdx_A Mandelate racemase/muco 93.5 0.096 3.3E-06 39.9 4.8 40 12-51 227-267 (379)
164 4gj1_A 1-(5-phosphoribosyl)-5- 93.3 0.16 5.6E-06 36.7 5.6 43 12-56 185-229 (243)
165 1mdl_A Mandelate racemase; iso 93.2 0.13 4.5E-06 38.7 5.1 41 12-52 230-271 (359)
166 3ru6_A Orotidine 5'-phosphate 93.2 0.16 5.5E-06 38.5 5.5 48 14-62 182-241 (303)
167 2qr6_A IMP dehydrogenase/GMP r 93.0 0.1 3.4E-06 40.0 4.3 38 13-52 202-240 (393)
168 2og9_A Mandelate racemase/muco 93.0 0.16 5.3E-06 39.0 5.3 39 12-50 248-287 (393)
169 3glc_A Aldolase LSRF; TIM barr 92.9 0.23 7.9E-06 37.3 6.0 48 13-61 214-267 (295)
170 2ovl_A Putative racemase; stru 92.6 0.17 5.8E-06 38.4 5.0 43 12-54 232-275 (371)
171 2jbm_A Nicotinate-nucleotide p 92.4 0.072 2.4E-06 40.1 2.6 32 23-55 245-276 (299)
172 1pii_A N-(5'phosphoribosyl)ant 92.3 0.35 1.2E-05 38.5 6.6 52 13-66 197-251 (452)
173 2nql_A AGR_PAT_674P, isomerase 92.2 0.15 5.2E-06 38.9 4.3 43 12-54 249-292 (388)
174 2qgy_A Enolase from the enviro 92.2 0.23 7.8E-06 38.0 5.3 39 12-50 235-274 (391)
175 1to3_A Putative aldolase YIHT; 92.2 0.33 1.1E-05 36.4 6.1 43 21-64 220-271 (304)
176 3m47_A Orotidine 5'-phosphate 92.0 0.21 7E-06 35.9 4.6 52 11-64 161-215 (228)
177 1qap_A Quinolinic acid phospho 92.0 0.23 7.8E-06 37.3 5.0 41 13-54 241-283 (296)
178 2ps2_A Putative mandelate race 92.0 0.2 6.8E-06 37.9 4.7 39 12-50 229-268 (371)
179 3tfx_A Orotidine 5'-phosphate 91.9 0.31 1.1E-05 36.0 5.6 51 12-63 166-228 (259)
180 1hg3_A Triosephosphate isomera 91.9 0.43 1.5E-05 34.5 6.2 55 10-65 163-219 (225)
181 4af0_A Inosine-5'-monophosphat 91.8 0.21 7.3E-06 40.8 4.9 44 17-61 379-423 (556)
182 1rvk_A Isomerase/lactonizing e 91.7 0.31 1E-05 37.0 5.5 39 12-50 241-281 (382)
183 3lab_A Putative KDPG (2-keto-3 91.2 0.34 1.1E-05 35.1 5.0 51 12-66 53-104 (217)
184 1w0m_A TIM, triosephosphate is 91.2 0.56 1.9E-05 33.9 6.2 54 11-65 161-216 (226)
185 4e38_A Keto-hydroxyglutarate-a 91.0 0.39 1.3E-05 34.9 5.2 55 12-70 74-130 (232)
186 2p8b_A Mandelate racemase/muco 91.0 0.34 1.2E-05 36.6 5.0 41 12-52 227-268 (369)
187 2qdd_A Mandelate racemase/muco 90.9 0.31 1.1E-05 37.0 4.8 43 12-54 227-270 (378)
188 1nu5_A Chloromuconate cycloiso 90.7 0.47 1.6E-05 35.8 5.6 39 12-50 229-268 (370)
189 2gl5_A Putative dehydratase pr 90.7 0.34 1.2E-05 37.1 4.8 39 12-50 259-298 (410)
190 2pp0_A L-talarate/galactarate 90.6 0.42 1.4E-05 36.7 5.3 39 12-50 261-300 (398)
191 1ypf_A GMP reductase; GUAC, pu 90.5 0.26 8.9E-06 37.1 4.0 38 12-50 138-176 (336)
192 3paj_A Nicotinate-nucleotide p 90.5 0.44 1.5E-05 36.4 5.2 39 14-53 265-305 (320)
193 2o56_A Putative mandelate race 90.2 0.37 1.3E-05 36.9 4.7 39 12-50 256-295 (407)
194 2hzg_A Mandelate racemase/muco 90.0 0.39 1.3E-05 36.8 4.7 43 12-54 236-280 (401)
195 2qde_A Mandelate racemase/muco 89.9 0.39 1.3E-05 36.7 4.7 39 12-50 230-269 (397)
196 2gdq_A YITF; mandelate racemas 89.9 0.42 1.4E-05 36.4 4.8 39 12-50 226-265 (382)
197 2poz_A Putative dehydratase; o 89.9 0.35 1.2E-05 36.9 4.3 39 12-50 240-279 (392)
198 3c2e_A Nicotinate-nucleotide p 89.9 0.094 3.2E-06 39.3 1.1 32 23-55 250-281 (294)
199 2ox4_A Putative mandelate race 89.7 0.39 1.3E-05 36.7 4.5 39 12-50 250-289 (403)
200 3mqt_A Mandelate racemase/muco 89.6 0.31 1.1E-05 37.4 3.9 39 12-50 242-281 (394)
201 3vkj_A Isopentenyl-diphosphate 89.5 0.49 1.7E-05 36.4 4.9 38 12-50 177-217 (368)
202 2zad_A Muconate cycloisomerase 89.5 0.75 2.6E-05 34.3 5.8 57 12-68 225-284 (345)
203 3mkc_A Racemase; metabolic pro 89.4 0.38 1.3E-05 37.0 4.2 39 12-50 247-286 (394)
204 3rcy_A Mandelate racemase/muco 89.3 0.59 2E-05 36.5 5.3 39 12-50 244-283 (433)
205 1sjd_A N-acylamino acid racema 89.3 0.53 1.8E-05 35.5 4.9 39 12-50 223-262 (368)
206 1vc4_A Indole-3-glycerol phosp 89.3 1.8 6.2E-05 31.4 7.6 51 11-64 95-146 (254)
207 2c6q_A GMP reductase 2; TIM ba 89.1 0.56 1.9E-05 35.7 4.9 39 12-51 150-189 (351)
208 3go2_A Putative L-alanine-DL-g 89.1 0.48 1.6E-05 36.6 4.6 39 12-50 252-291 (409)
209 3tr2_A Orotidine 5'-phosphate 89.0 0.84 2.9E-05 33.1 5.6 50 13-63 167-228 (239)
210 3dip_A Enolase; structural gen 89.0 0.69 2.3E-05 35.8 5.4 39 12-50 255-294 (410)
211 3rr1_A GALD, putative D-galact 88.9 0.5 1.7E-05 36.6 4.6 39 12-50 219-258 (405)
212 2uv8_G Fatty acid synthase sub 88.9 0.19 6.5E-06 46.5 2.5 56 14-70 754-827 (2051)
213 3sbf_A Mandelate racemase / mu 88.8 0.55 1.9E-05 36.1 4.8 39 12-50 242-281 (401)
214 3jva_A Dipeptide epimerase; en 88.6 0.76 2.6E-05 34.6 5.4 40 12-51 224-264 (354)
215 2qq6_A Mandelate racemase/muco 88.6 0.59 2E-05 35.8 4.8 39 12-50 251-290 (410)
216 3stp_A Galactonate dehydratase 88.5 0.68 2.3E-05 35.9 5.1 39 12-50 271-310 (412)
217 1o4u_A Type II quinolic acid p 88.4 0.12 4.2E-06 38.7 0.8 33 22-55 240-272 (285)
218 3zen_D Fatty acid synthase; tr 88.3 0.14 4.8E-06 48.9 1.3 54 15-69 599-670 (3089)
219 4e5t_A Mandelate racemase / mu 88.3 0.54 1.9E-05 36.2 4.4 39 12-50 249-288 (404)
220 3eez_A Putative mandelate race 88.1 0.87 3E-05 34.7 5.4 47 12-58 227-274 (378)
221 3dg3_A Muconate cycloisomerase 88.1 0.81 2.8E-05 34.6 5.2 39 12-50 226-265 (367)
222 3ozy_A Putative mandelate race 88.0 0.51 1.7E-05 36.2 4.1 39 12-50 236-276 (389)
223 3i4k_A Muconate lactonizing en 88.0 0.83 2.8E-05 34.8 5.3 39 12-50 235-274 (383)
224 3tqv_A Nicotinate-nucleotide p 87.9 0.48 1.6E-05 35.7 3.8 32 22-54 242-273 (287)
225 2oz8_A MLL7089 protein; struct 87.8 1.1 3.6E-05 34.2 5.8 40 12-51 233-273 (389)
226 1tkk_A Similar to chloromucona 87.8 0.9 3.1E-05 34.1 5.3 40 12-51 228-268 (366)
227 3vcn_A Mannonate dehydratase; 87.7 0.43 1.5E-05 37.2 3.5 39 12-50 268-307 (425)
228 3v3w_A Starvation sensing prot 87.3 0.46 1.6E-05 37.0 3.5 39 12-50 267-306 (424)
229 3sjn_A Mandelate racemase/muco 87.2 0.57 1.9E-05 35.6 3.9 39 12-50 235-274 (374)
230 4dxk_A Mandelate racemase / mu 87.1 0.78 2.7E-05 35.3 4.7 39 12-50 251-290 (400)
231 3r4e_A Mandelate racemase/muco 87.0 0.41 1.4E-05 37.1 3.1 39 12-50 261-300 (418)
232 3bjs_A Mandelate racemase/muco 87.0 0.53 1.8E-05 36.6 3.7 39 12-50 270-310 (428)
233 4e4u_A Mandalate racemase/muco 86.9 0.74 2.5E-05 35.6 4.4 39 12-50 242-281 (412)
234 3ldv_A Orotidine 5'-phosphate 86.9 1.1 3.8E-05 32.9 5.2 52 12-64 184-247 (255)
235 1qpo_A Quinolinate acid phosph 86.8 0.38 1.3E-05 35.9 2.7 33 22-55 241-273 (284)
236 3ngj_A Deoxyribose-phosphate a 86.8 0.96 3.3E-05 33.1 4.8 41 12-53 188-231 (239)
237 2v5b_A Triosephosphate isomera 86.8 0.86 3E-05 33.4 4.5 42 23-65 200-241 (244)
238 3tj4_A Mandelate racemase; eno 86.6 1.2 4E-05 33.9 5.3 39 12-50 238-277 (372)
239 3qja_A IGPS, indole-3-glycerol 86.5 1.1 3.9E-05 32.9 5.1 49 12-61 103-152 (272)
240 3krs_A Triosephosphate isomera 86.3 0.67 2.3E-05 34.6 3.7 56 9-65 203-268 (271)
241 3oa3_A Aldolase; structural ge 85.9 1.7 5.7E-05 32.7 5.8 40 13-53 220-265 (288)
242 3tji_A Mandelate racemase/muco 85.9 0.62 2.1E-05 36.2 3.5 39 12-50 263-302 (422)
243 3igs_A N-acetylmannosamine-6-p 85.8 0.97 3.3E-05 32.4 4.3 57 12-69 59-131 (232)
244 3ddm_A Putative mandelate race 85.8 1.1 3.6E-05 34.5 4.8 39 12-50 241-280 (392)
245 1tzz_A Hypothetical protein L1 85.7 0.81 2.8E-05 34.9 4.1 39 12-50 251-294 (392)
246 2hxt_A L-fuconate dehydratase; 85.6 1.2 3.9E-05 34.6 4.9 39 12-50 283-323 (441)
247 3qst_A Triosephosphate isomera 85.5 0.73 2.5E-05 34.0 3.6 42 23-65 208-249 (255)
248 3q45_A Mandelate racemase/muco 85.5 1.3 4.3E-05 33.6 5.1 39 12-50 225-264 (368)
249 1p4c_A L(+)-mandelate dehydrog 85.5 1.2 4.2E-05 34.1 5.0 38 12-50 215-252 (380)
250 1r0m_A N-acylamino acid racema 85.3 1.4 4.7E-05 33.3 5.1 39 12-50 229-268 (375)
251 3my9_A Muconate cycloisomerase 85.3 1.4 4.8E-05 33.4 5.2 39 12-50 232-271 (377)
252 1o5x_A TIM, triosephosphate is 85.3 0.57 1.9E-05 34.5 2.9 56 9-65 180-245 (248)
253 1chr_A Chloromuconate cycloiso 85.1 1.5 5E-05 33.2 5.3 39 12-50 229-268 (370)
254 4dwd_A Mandelate racemase/muco 84.9 1.2 4.2E-05 34.2 4.8 38 12-50 232-270 (393)
255 3gnn_A Nicotinate-nucleotide p 84.9 0.95 3.3E-05 34.2 4.0 29 23-52 254-282 (298)
256 2zc8_A N-acylamino acid racema 84.9 1.5 5.2E-05 32.9 5.2 39 12-50 222-261 (369)
257 3r2g_A Inosine 5'-monophosphat 84.7 0.97 3.3E-05 34.8 4.1 38 12-51 130-169 (361)
258 3sgz_A Hydroxyacid oxidase 2; 84.5 1.4 4.6E-05 34.0 4.8 38 12-50 207-244 (352)
259 3l0g_A Nicotinate-nucleotide p 84.4 0.93 3.2E-05 34.3 3.8 30 23-53 252-281 (300)
260 2j27_A Triosephosphate isomera 84.3 0.78 2.7E-05 33.8 3.3 56 9-65 182-247 (250)
261 3t6c_A RSPA, putative MAND fam 84.3 1.6 5.4E-05 34.1 5.2 39 12-50 281-320 (440)
262 1ub3_A Aldolase protein; schif 84.3 2.2 7.4E-05 30.6 5.6 43 12-55 164-211 (220)
263 2nli_A Lactate oxidase; flavoe 83.9 1.4 4.9E-05 33.7 4.7 38 12-50 219-256 (368)
264 1n7k_A Deoxyribose-phosphate a 83.8 2.4 8.3E-05 30.7 5.7 42 13-55 181-227 (234)
265 3ugv_A Enolase; enzyme functio 83.4 2 6.7E-05 32.9 5.3 39 12-50 260-299 (390)
266 3r12_A Deoxyribose-phosphate a 83.2 2.6 8.9E-05 31.2 5.7 43 12-55 204-251 (260)
267 1gox_A (S)-2-hydroxy-acid oxid 83.2 2.4 8.1E-05 32.3 5.7 39 12-51 215-253 (370)
268 3q58_A N-acetylmannosamine-6-p 82.8 1.7 5.8E-05 31.1 4.5 57 12-69 59-131 (229)
269 2i1o_A Nicotinate phosphoribos 82.7 4 0.00014 31.7 6.9 60 11-71 253-322 (398)
270 2vxn_A Triosephosphate isomera 82.6 1.3 4.3E-05 32.7 3.8 42 23-65 207-248 (251)
271 3p3b_A Mandelate racemase/muco 82.5 1.1 3.8E-05 34.2 3.6 38 12-50 241-284 (392)
272 2jgq_A Triosephosphate isomera 82.4 0.65 2.2E-05 33.9 2.1 55 9-63 173-229 (233)
273 3sr7_A Isopentenyl-diphosphate 82.3 2.2 7.4E-05 32.9 5.2 38 12-50 196-236 (365)
274 3ndo_A Deoxyribose-phosphate a 82.0 3.2 0.00011 30.1 5.8 40 12-52 178-220 (231)
275 4e4f_A Mannonate dehydratase; 81.8 0.77 2.6E-05 35.7 2.5 39 12-50 269-308 (426)
276 3mwc_A Mandelate racemase/muco 81.3 2.7 9.2E-05 32.3 5.4 39 12-50 245-284 (400)
277 3toy_A Mandelate racemase/muco 81.2 1.8 6.3E-05 33.0 4.4 39 12-50 254-293 (383)
278 3tsm_A IGPS, indole-3-glycerol 81.1 1.8 6E-05 32.1 4.1 48 12-60 110-158 (272)
279 3khj_A Inosine-5-monophosphate 80.3 2.6 9E-05 32.2 5.0 39 12-51 135-173 (361)
280 3qw3_A Orotidine-5-phosphate d 78.8 2.9 0.0001 30.5 4.7 51 11-62 181-239 (255)
281 2nzl_A Hydroxyacid oxidase 1; 78.7 1.9 6.5E-05 33.3 3.8 37 13-50 243-279 (392)
282 1p0k_A Isopentenyl-diphosphate 78.5 3.5 0.00012 30.8 5.1 38 12-50 168-208 (349)
283 3r0u_A Enzyme of enolase super 78.5 3.8 0.00013 31.2 5.4 39 12-50 229-268 (379)
284 3ffs_A Inosine-5-monophosphate 78.4 2.6 8.8E-05 32.9 4.5 38 12-51 174-212 (400)
285 1kbi_A Cytochrome B2, L-LCR; f 78.1 2.9 9.8E-05 33.5 4.7 38 12-50 333-370 (511)
286 1vrd_A Inosine-5'-monophosphat 78.0 3 0.0001 32.6 4.8 38 12-50 267-305 (494)
287 3th6_A Triosephosphate isomera 77.8 1.5 5.2E-05 32.2 2.9 41 23-64 204-244 (249)
288 3i6e_A Muconate cycloisomerase 77.6 3.1 0.00011 31.7 4.7 39 12-50 233-272 (385)
289 1eep_A Inosine 5'-monophosphat 77.3 3.2 0.00011 31.8 4.7 37 13-50 184-221 (404)
290 4af0_A Inosine-5'-monophosphat 77.3 2.3 7.9E-05 34.8 4.0 36 12-48 311-347 (556)
291 1zfj_A Inosine monophosphate d 77.1 2.4 8.3E-05 33.0 4.0 37 13-51 264-302 (491)
292 2f7f_A Nicotinate phosphoribos 75.6 3.6 0.00012 32.9 4.7 44 13-56 271-321 (494)
293 4fo4_A Inosine 5'-monophosphat 75.4 4 0.00014 31.3 4.8 37 13-51 139-177 (366)
294 3tcs_A Racemase, putative; PSI 75.2 4.8 0.00016 30.8 5.2 39 12-50 240-279 (388)
295 1y0e_A Putative N-acetylmannos 74.6 5.4 0.00018 27.4 4.9 54 12-66 46-115 (223)
296 3dgb_A Muconate cycloisomerase 73.9 5.5 0.00019 30.2 5.2 39 12-50 235-274 (382)
297 4avf_A Inosine-5'-monophosphat 73.9 4.7 0.00016 31.9 4.9 38 12-51 259-298 (490)
298 4adt_A Pyridoxine biosynthetic 73.1 1.7 5.8E-05 32.6 2.1 55 10-66 66-121 (297)
299 3fv9_G Mandelate racemase/muco 72.9 5.4 0.00018 30.4 4.9 39 12-50 233-272 (386)
300 1yya_A Triosephosphate isomera 72.8 1.9 6.4E-05 31.7 2.2 56 9-64 181-246 (250)
301 2ffc_A Orotidine 5-monophospha 72.5 3.1 0.00011 32.0 3.5 52 11-62 277-335 (353)
302 1tre_A Triosephosphate isomera 72.3 1.6 5.5E-05 32.2 1.8 56 9-64 182-246 (255)
303 2i14_A Nicotinate-nucleotide p 72.3 6.1 0.00021 30.6 5.1 47 10-58 250-302 (395)
304 1nsj_A PRAI, phosphoribosyl an 72.2 1.8 6.2E-05 30.6 2.0 43 22-64 151-198 (205)
305 4g1k_A Triosephosphate isomera 72.1 2 6.9E-05 32.0 2.3 56 9-64 207-268 (272)
306 1ney_A TIM, triosephosphate is 71.8 1.1 3.7E-05 33.0 0.7 56 9-65 179-244 (247)
307 4fxs_A Inosine-5'-monophosphat 71.0 5.3 0.00018 31.7 4.6 38 12-51 261-300 (496)
308 1aw2_A Triosephosphate isomera 70.9 1.5 5E-05 32.4 1.3 56 9-64 184-248 (256)
309 2v82_A 2-dehydro-3-deoxy-6-pho 70.5 3.6 0.00012 28.2 3.2 49 13-65 48-98 (212)
310 2btm_A TIM, protein (triosepho 70.4 2.6 8.9E-05 31.0 2.5 57 9-65 181-247 (252)
311 2i9e_A Triosephosphate isomera 70.3 1.8 6.2E-05 32.0 1.7 43 23-65 203-245 (259)
312 3m9y_A Triosephosphate isomera 69.9 2.2 7.5E-05 31.4 2.0 42 23-64 209-250 (254)
313 1b9b_A TIM, protein (triosepho 69.2 1.6 5.4E-05 32.3 1.1 56 9-64 183-250 (255)
314 1wa3_A 2-keto-3-deoxy-6-phosph 69.2 4.5 0.00015 27.5 3.4 40 12-53 50-91 (205)
315 4dye_A Isomerase; enolase fami 69.0 5.5 0.00019 30.6 4.2 39 12-50 251-290 (398)
316 3ro6_B Putative chloromuconate 68.9 1.6 5.5E-05 32.8 1.2 38 13-50 226-265 (356)
317 3fcp_A L-Ala-D/L-Glu epimerase 68.3 10 0.00035 28.7 5.6 39 12-50 234-273 (381)
318 3f6p_A Transcriptional regulat 68.2 8.6 0.0003 22.9 4.3 38 12-49 63-101 (120)
319 3gd6_A Muconate cycloisomerase 67.7 6.1 0.00021 30.1 4.2 39 12-52 230-269 (391)
320 2yc6_A Triosephosphate isomera 67.1 5.1 0.00017 29.5 3.5 55 9-64 185-249 (257)
321 1vcv_A Probable deoxyribose-ph 67.0 11 0.00038 27.0 5.3 33 13-46 170-211 (226)
322 3usb_A Inosine-5'-monophosphat 67.0 5.7 0.00019 31.6 4.0 37 12-50 286-324 (511)
323 1r2r_A TIM, triosephosphate is 66.4 2.2 7.6E-05 31.3 1.4 42 23-64 204-245 (248)
324 1vhc_A Putative KHG/KDPG aldol 66.4 11 0.00039 26.6 5.2 51 12-66 57-108 (224)
325 1mo0_A TIM, triosephosphate is 65.9 2.8 9.7E-05 31.3 1.9 44 23-66 223-266 (275)
326 1geq_A Tryptophan synthase alp 65.7 4.1 0.00014 28.5 2.7 39 13-52 71-116 (248)
327 2p10_A MLL9387 protein; putati 65.1 14 0.00048 27.7 5.6 44 14-58 218-266 (286)
328 1v5x_A PRA isomerase, phosphor 64.3 2.6 9E-05 29.7 1.5 43 22-65 146-193 (203)
329 1wbh_A KHG/KDPG aldolase; lyas 63.5 11 0.00037 26.5 4.6 49 12-64 56-105 (214)
330 3snk_A Response regulator CHEY 63.3 15 0.00052 22.2 4.8 38 12-49 76-115 (135)
331 1yxy_A Putative N-acetylmannos 63.3 9.6 0.00033 26.4 4.3 54 12-66 59-129 (234)
332 1m6j_A TIM, TPI, triosephospha 63.3 2.9 0.0001 30.9 1.6 43 23-65 213-255 (261)
333 4e8g_A Enolase, mandelate race 62.8 11 0.00038 28.7 4.8 39 12-50 248-287 (391)
334 3qw4_B UMP synthase; N-termina 62.7 4.7 0.00016 31.8 2.8 52 11-62 182-240 (453)
335 1jcn_A Inosine monophosphate d 61.5 11 0.00038 29.5 4.8 37 12-50 285-323 (514)
336 3ik4_A Mandelate racemase/muco 61.3 14 0.00049 27.7 5.2 39 12-50 230-269 (365)
337 2zbt_A Pyridoxal biosynthesis 60.8 12 0.0004 27.1 4.5 36 12-48 68-104 (297)
338 3eww_A Ompdecase, orotidine-5' 60.8 6.5 0.00022 28.8 3.1 40 24-64 192-243 (260)
339 4aaj_A N-(5'-phosphoribosyl)an 60.3 3.9 0.00013 29.4 1.8 21 22-42 173-193 (228)
340 2qzj_A Two-component response 60.3 19 0.00064 21.9 4.9 38 12-49 65-103 (136)
341 3kxq_A Triosephosphate isomera 59.9 3.5 0.00012 30.7 1.5 57 9-65 205-270 (275)
342 1me8_A Inosine-5'-monophosphat 58.7 5.7 0.00019 31.4 2.6 38 12-51 272-312 (503)
343 1j5p_A Aspartate dehydrogenase 58.0 5.9 0.0002 29.0 2.4 41 25-66 64-106 (253)
344 4e7p_A Response regulator; DNA 57.9 29 0.001 21.3 5.6 38 12-49 83-122 (150)
345 1zgz_A Torcad operon transcrip 57.5 26 0.00088 20.5 5.0 38 12-49 63-101 (122)
346 3n3m_A Orotidine 5'-phosphate 57.4 9.9 0.00034 29.1 3.7 53 11-63 265-324 (342)
347 2pln_A HP1043, response regula 57.3 29 0.00098 20.8 5.5 38 12-49 75-114 (137)
348 1dbw_A Transcriptional regulat 57.3 27 0.00094 20.6 5.5 37 12-48 64-102 (126)
349 3ta6_A Triosephosphate isomera 57.2 5.9 0.0002 29.4 2.3 42 23-64 211-252 (267)
350 3lua_A Response regulator rece 57.2 29 0.001 20.9 5.4 51 12-65 68-122 (140)
351 3gt7_A Sensor protein; structu 57.0 24 0.00081 22.0 5.0 38 12-49 68-109 (154)
352 1vcf_A Isopentenyl-diphosphate 56.8 9.6 0.00033 28.2 3.5 37 12-50 172-211 (332)
353 3to5_A CHEY homolog; alpha(5)b 56.7 25 0.00087 22.5 5.2 38 11-48 73-114 (134)
354 2r25_B Osmosensing histidine p 56.5 28 0.00095 21.0 5.2 37 12-48 69-108 (133)
355 3jte_A Response regulator rece 56.0 31 0.0011 20.8 5.8 38 12-49 66-105 (143)
356 3gl9_A Response regulator; bet 55.9 25 0.00086 20.9 4.9 37 12-48 63-103 (122)
357 1wuf_A Hypothetical protein LI 55.6 18 0.00062 27.4 4.9 39 12-50 242-281 (393)
358 3kto_A Response regulator rece 55.6 29 0.001 20.9 5.2 38 12-49 69-108 (136)
359 3b2n_A Uncharacterized protein 55.4 31 0.0011 20.7 5.6 38 12-49 66-105 (133)
360 3hdv_A Response regulator; PSI 55.4 28 0.00097 20.8 5.1 38 12-49 69-109 (136)
361 2a9o_A Response regulator; ess 55.3 28 0.00095 20.1 5.4 38 12-49 62-100 (120)
362 3hdg_A Uncharacterized protein 54.9 29 0.00098 20.8 5.0 37 12-48 68-106 (137)
363 4dad_A Putative pilus assembly 54.4 22 0.00074 21.7 4.4 37 12-48 84-122 (146)
364 3rqi_A Response regulator prot 54.2 27 0.00091 22.6 5.1 38 12-49 68-107 (184)
365 3cg0_A Response regulator rece 53.9 33 0.0011 20.5 5.2 38 12-49 72-110 (140)
366 1xhf_A DYE resistance, aerobic 53.8 31 0.0011 20.1 5.6 37 12-48 64-101 (123)
367 3eod_A Protein HNR; response r 53.8 32 0.0011 20.3 5.1 41 12-54 68-110 (130)
368 1xm3_A Thiazole biosynthesis p 53.4 8.6 0.00029 27.8 2.6 37 21-58 11-49 (264)
369 3g3d_A UMP synthase, uridine 5 53.2 10 0.00035 28.6 3.1 39 24-63 244-294 (312)
370 3luf_A Two-component system re 53.0 33 0.0011 23.9 5.7 38 11-49 64-102 (259)
371 3kht_A Response regulator; PSI 52.6 26 0.00088 21.3 4.6 37 12-48 68-108 (144)
372 3h1g_A Chemotaxis protein CHEY 51.9 29 0.00098 20.7 4.7 38 12-49 68-109 (129)
373 1vlp_A Naprtase, nicotinate ph 51.3 31 0.0011 27.1 5.7 46 12-57 314-372 (441)
374 3crn_A Response regulator rece 51.2 37 0.0013 20.3 5.6 38 12-49 64-103 (132)
375 1zh2_A KDP operon transcriptio 51.0 31 0.0011 19.9 4.6 37 12-48 62-99 (121)
376 4hnl_A Mandelate racemase/muco 51.0 11 0.00037 28.9 3.0 39 12-50 262-301 (421)
377 3eul_A Possible nitrate/nitrit 50.8 40 0.0014 20.6 5.6 38 12-49 78-117 (152)
378 3t6k_A Response regulator rece 50.6 39 0.0013 20.4 5.4 38 12-49 65-106 (136)
379 1srr_A SPO0F, sporulation resp 50.4 36 0.0012 19.9 5.5 37 12-48 64-102 (124)
380 2qxy_A Response regulator; reg 50.4 39 0.0013 20.3 5.4 38 12-49 64-103 (142)
381 3hv2_A Response regulator/HD d 50.3 42 0.0014 20.6 6.1 38 12-49 75-115 (153)
382 1mxs_A KDPG aldolase; 2-keto-3 50.1 23 0.0008 25.0 4.5 47 13-63 67-114 (225)
383 2iqt_A Fructose-bisphosphate a 50.1 14 0.00047 27.9 3.3 35 22-56 234-268 (296)
384 1i3c_A Response regulator RCP1 49.5 41 0.0014 20.6 5.2 38 12-49 78-119 (149)
385 3hzh_A Chemotaxis response reg 49.4 44 0.0015 20.7 5.7 37 12-48 100-138 (157)
386 4hpn_A Putative uncharacterize 49.3 24 0.00082 26.3 4.7 39 12-50 229-268 (378)
387 4h83_A Mandelate racemase/muco 49.2 29 0.00098 26.3 5.1 38 13-50 252-290 (388)
388 3o07_A Pyridoxine biosynthesis 49.0 21 0.00071 26.9 4.1 39 9-48 55-94 (291)
389 1tmy_A CHEY protein, TMY; chem 48.5 38 0.0013 19.6 5.4 37 12-48 64-102 (120)
390 2chr_A Chloromuconate cycloiso 48.4 30 0.001 25.6 5.1 39 12-50 229-268 (370)
391 1k68_A Phytochrome response re 47.9 41 0.0014 19.8 5.0 37 12-48 72-112 (140)
392 4h1z_A Enolase Q92ZS5; dehydra 47.4 36 0.0012 25.9 5.5 39 12-50 273-312 (412)
393 2pl1_A Transcriptional regulat 46.5 41 0.0014 19.4 5.3 38 12-49 61-100 (121)
394 3iv3_A Tagatose 1,6-diphosphat 46.2 24 0.00082 26.8 4.2 44 15-58 235-287 (332)
395 2fds_A Orotidine-monophosphate 46.0 47 0.0016 25.4 5.8 52 12-63 268-326 (352)
396 3q9s_A DNA-binding response re 45.7 33 0.0011 23.6 4.6 38 12-49 98-136 (249)
397 3cfy_A Putative LUXO repressor 45.7 48 0.0016 20.0 5.5 38 12-49 65-104 (137)
398 3f6c_A Positive transcription 45.7 31 0.0011 20.4 4.1 40 12-53 63-104 (134)
399 3cz5_A Two-component response 45.6 50 0.0017 20.2 5.6 38 12-49 68-107 (153)
400 3heb_A Response regulator rece 45.4 50 0.0017 20.1 5.3 37 12-48 76-116 (152)
401 3gdm_A Orotidine 5'-phosphate 45.3 17 0.00059 26.6 3.2 27 35-62 219-246 (267)
402 2hqr_A Putative transcriptiona 44.5 53 0.0018 21.6 5.4 52 12-65 57-110 (223)
403 2qr3_A Two-component system re 44.5 36 0.0012 20.3 4.3 38 12-49 69-108 (140)
404 3vdg_A Probable glucarate dehy 44.4 23 0.00078 27.6 3.9 39 12-50 276-315 (445)
405 3os4_A Naprtase, nicotinate ph 44.3 42 0.0014 26.1 5.4 48 12-59 290-348 (407)
406 2zay_A Response regulator rece 44.0 47 0.0016 20.0 4.8 38 12-49 69-110 (147)
407 3vnd_A TSA, tryptophan synthas 43.9 18 0.0006 26.5 3.1 41 24-64 22-68 (267)
408 1v5x_A PRA isomerase, phosphor 43.6 25 0.00086 24.5 3.7 22 28-50 5-27 (203)
409 1nsj_A PRAI, phosphoribosyl an 43.5 25 0.00084 24.6 3.7 40 26-66 4-48 (205)
410 3va8_A Probable dehydratase; e 43.4 21 0.00072 27.8 3.6 39 12-50 274-313 (445)
411 3mm4_A Histidine kinase homolo 42.9 57 0.002 21.5 5.4 51 11-66 135-192 (206)
412 3cnb_A DNA-binding response re 42.6 52 0.0018 19.5 5.1 37 12-48 71-111 (143)
413 3ven_A O-carbamoyltransferase 42.2 30 0.001 28.2 4.4 45 12-56 518-571 (576)
414 1k66_A Phytochrome response re 41.7 39 0.0013 20.2 4.1 38 12-49 79-120 (149)
415 1qkk_A DCTD, C4-dicarboxylate 41.6 48 0.0016 20.3 4.6 38 12-49 64-103 (155)
416 2isw_A Putative fructose-1,6-b 40.9 47 0.0016 25.2 5.1 38 12-50 194-254 (323)
417 1p6q_A CHEY2; chemotaxis, sign 40.5 48 0.0017 19.4 4.4 37 12-48 68-108 (129)
418 1dz3_A Stage 0 sporulation pro 40.1 56 0.0019 19.2 5.1 37 12-48 65-104 (130)
419 3s5s_A Mandelate racemase/muco 39.7 56 0.0019 24.7 5.4 39 12-50 231-270 (389)
420 1ybe_A Naprtase, nicotinate ph 39.5 56 0.0019 25.7 5.5 46 12-57 320-376 (449)
421 2qvg_A Two component response 39.3 37 0.0013 20.4 3.7 37 12-48 76-116 (143)
422 1qo0_D AMIR; binding protein, 39.2 58 0.002 21.0 4.9 37 13-49 69-107 (196)
423 3o63_A Probable thiamine-phosp 39.0 26 0.00088 25.1 3.3 38 14-52 125-163 (243)
424 4a35_A Mitochondrial enolase s 39.0 61 0.0021 25.1 5.6 38 13-50 287-328 (441)
425 3n5l_A Binding protein compone 38.8 66 0.0023 23.0 5.6 39 13-51 26-64 (310)
426 3p7i_A PHND, subunit of alkylp 38.8 62 0.0021 23.5 5.4 39 13-51 36-74 (321)
427 1jbe_A Chemotaxis protein CHEY 38.5 59 0.002 18.9 4.7 37 12-48 66-106 (128)
428 3kcn_A Adenylate cyclase homol 38.4 67 0.0023 19.6 4.9 37 12-48 65-104 (151)
429 3u42_A 50S ribosomal protein L 37.8 33 0.0011 24.6 3.6 27 34-68 82-108 (229)
430 3lte_A Response regulator; str 37.7 59 0.002 19.1 4.4 37 12-48 67-106 (132)
431 3q94_A Fructose-bisphosphate a 37.2 46 0.0016 24.7 4.5 41 12-53 196-238 (288)
432 3noy_A 4-hydroxy-3-methylbut-2 37.1 71 0.0024 24.7 5.6 39 12-51 74-112 (366)
433 4g8t_A Glucarate dehydratase; 36.6 51 0.0018 25.6 4.9 38 12-49 291-329 (464)
434 2ozt_A TLR1174 protein; struct 36.2 71 0.0024 23.4 5.4 39 12-50 205-244 (332)
435 3qld_A Mandelate racemase/muco 36.1 62 0.0021 24.4 5.2 38 13-50 231-269 (388)
436 1gvf_A Tagatose-bisphosphate a 36.1 54 0.0018 24.3 4.7 39 12-51 192-232 (286)
437 1wue_A Mandelate racemase/muco 36.0 53 0.0018 24.6 4.7 38 13-50 243-281 (386)
438 1p2f_A Response regulator; DRR 35.9 87 0.003 20.4 5.4 38 12-49 60-99 (220)
439 1a04_A Nitrate/nitrite respons 35.4 91 0.0031 20.2 5.5 38 12-49 68-107 (215)
440 3u9i_A Mandelate racemase/muco 35.3 63 0.0022 24.5 5.1 39 12-50 260-299 (393)
441 2qsj_A DNA-binding response re 35.2 43 0.0015 20.4 3.6 37 12-48 67-105 (154)
442 2a4a_A Deoxyribose-phosphate a 34.3 43 0.0015 24.8 3.9 21 23-43 226-247 (281)
443 1mb3_A Cell division response 34.2 54 0.0018 19.0 3.8 37 12-48 62-102 (124)
444 2qap_A Fructose-1,6-bisphospha 34.0 53 0.0018 25.7 4.4 45 13-57 282-338 (391)
445 3t8y_A CHEB, chemotaxis respon 33.7 78 0.0027 19.7 4.7 38 12-49 88-128 (164)
446 3f4w_A Putative hexulose 6 pho 33.5 71 0.0024 21.3 4.7 44 24-67 2-50 (211)
447 3cu5_A Two component transcrip 33.5 26 0.00088 21.4 2.3 37 12-48 66-104 (141)
448 3r0j_A Possible two component 33.3 83 0.0028 21.2 5.1 38 12-49 84-123 (250)
449 3ilh_A Two component response 32.9 79 0.0027 18.7 5.7 37 12-48 77-120 (146)
450 1s8n_A Putative antiterminator 32.8 27 0.00092 22.8 2.4 38 12-49 75-113 (205)
451 3cni_A Putative ABC type-2 tra 32.7 29 0.001 22.4 2.5 33 32-69 43-75 (156)
452 2htm_A Thiazole biosynthesis p 32.5 44 0.0015 24.8 3.6 29 23-51 14-43 (268)
453 1i4n_A Indole-3-glycerol phosp 32.2 78 0.0027 22.8 4.9 45 12-57 91-136 (251)
454 2rjn_A Response regulator rece 32.0 87 0.003 19.0 5.2 38 12-49 68-108 (154)
455 3mpk_A Virulence sensor protei 31.6 73 0.0025 21.5 4.6 38 12-49 60-97 (267)
456 2oqr_A Sensory transduction pr 30.3 56 0.0019 21.5 3.7 37 12-48 65-102 (230)
457 3ekg_A Mandelate racemase/muco 30.3 58 0.002 25.0 4.2 39 12-50 251-292 (404)
458 3dzd_A Transcriptional regulat 29.9 64 0.0022 24.0 4.3 38 12-49 61-100 (368)
459 4i62_A Amino acid ABC transpor 29.8 1.1E+02 0.0037 20.1 5.1 38 13-51 71-108 (269)
460 3eq2_A Probable two-component 29.8 59 0.002 23.8 4.0 38 11-48 65-104 (394)
461 1ny5_A Transcriptional regulat 29.6 84 0.0029 23.5 4.9 38 12-49 61-100 (387)
462 3luf_A Two-component system re 29.2 75 0.0026 22.0 4.4 37 12-48 186-226 (259)
463 3vc5_A Mandelate racemase/muco 29.1 46 0.0016 25.8 3.4 39 12-50 271-310 (441)
464 4aaj_A N-(5'-phosphoribosyl)an 28.9 1.2E+02 0.0041 21.4 5.4 60 5-66 51-112 (228)
465 1ii5_A SLR1257 protein; membra 28.5 1.2E+02 0.004 19.4 5.2 39 12-50 33-71 (233)
466 2fym_A Enolase; RNA degradosom 28.5 1.1E+02 0.0037 23.4 5.4 39 12-50 298-340 (431)
467 1kko_A 3-methylaspartate ammon 28.3 1.3E+02 0.0043 22.9 5.8 38 13-50 287-330 (413)
468 2ayx_A Sensor kinase protein R 27.9 98 0.0034 21.2 4.7 38 11-48 189-228 (254)
469 3bv4_A Fructose-bisphosphate a 27.6 50 0.0017 25.3 3.3 44 14-57 250-305 (341)
470 3m6m_D Sensory/regulatory prot 27.6 1.1E+02 0.0036 18.5 5.7 37 12-48 75-117 (143)
471 4dz1_A DALS D-alanine transpor 27.6 1.2E+02 0.004 20.2 5.0 39 12-51 57-95 (259)
472 1kcz_A Beta-methylaspartase; b 27.4 1.1E+02 0.0038 23.1 5.3 38 13-50 287-330 (413)
473 1w6t_A Enolase; bacterial infe 27.1 1.1E+02 0.0036 23.6 5.2 39 12-50 310-352 (444)
474 2pc4_A 41 kDa antigen, fructos 27.1 89 0.003 24.2 4.6 46 13-58 260-316 (369)
475 2gkg_A Response regulator homo 27.1 59 0.002 18.7 3.0 36 12-48 67-106 (127)
476 3tql_A Arginine-binding protei 26.9 1.2E+02 0.0042 19.1 5.1 39 12-51 30-68 (227)
477 3p0w_A Mandelate racemase/muco 26.5 1E+02 0.0036 24.0 5.1 38 12-49 289-327 (470)
478 1w25_A Stalked-cell differenti 26.2 1.2E+02 0.0039 22.6 5.2 38 12-49 62-103 (459)
479 3fxb_A Trap dicarboxylate tran 26.1 1.2E+02 0.0041 22.0 5.1 43 13-55 36-81 (326)
480 3bre_A Probable two-component 25.9 93 0.0032 22.1 4.4 38 12-49 80-121 (358)
481 3kbr_A Cyclohexadienyl dehydra 25.7 80 0.0028 20.5 3.8 39 12-51 43-81 (239)
482 2xwv_A Sialic acid-binding per 25.7 1.2E+02 0.0041 21.8 5.1 41 13-53 24-69 (312)
483 3mzn_A Glucarate dehydratase; 25.6 1E+02 0.0035 23.8 4.9 38 12-49 271-309 (450)
484 2im5_A Nicotinate phosphoribos 25.6 87 0.003 24.1 4.4 48 12-59 281-339 (394)
485 2jba_A Phosphate regulon trans 25.5 25 0.00086 20.6 1.1 38 12-49 63-104 (127)
486 2gwr_A DNA-binding response re 25.4 43 0.0015 22.5 2.4 38 12-49 66-104 (238)
487 2pfy_A Putative exported prote 25.4 78 0.0027 22.5 3.9 40 13-52 23-67 (301)
488 3c3w_A Two component transcrip 25.1 59 0.002 21.7 3.1 37 12-48 64-102 (225)
489 3t7v_A Methylornithine synthas 24.9 1.3E+02 0.0044 21.8 5.1 38 13-51 131-169 (350)
490 3pfr_A Mandelate racemase/muco 24.9 1.1E+02 0.0037 23.7 4.9 38 12-49 274-312 (455)
491 2pyy_A Ionotropic glutamate re 24.6 1.4E+02 0.0047 18.9 5.0 39 12-50 29-67 (228)
492 4h2h_A Mandelate racemase/muco 24.6 1.1E+02 0.0037 22.8 4.7 39 12-50 234-273 (376)
493 1p1x_A Deoxyribose-phosphate a 24.5 71 0.0024 23.2 3.6 21 23-43 199-220 (260)
494 3kyj_B CHEY6 protein, putative 24.5 65 0.0022 19.4 3.0 36 12-47 77-115 (145)
495 2pa6_A Enolase; glycolysis, ly 24.2 1.4E+02 0.0048 22.7 5.4 39 12-50 298-338 (427)
496 1wv2_A Thiazole moeity, thiazo 23.8 63 0.0021 23.9 3.1 33 23-55 21-54 (265)
497 2z06_A Putative uncharacterize 23.8 1.9E+02 0.0065 20.8 5.7 53 12-66 20-79 (252)
498 1mvo_A PHOP response regulator 23.7 77 0.0026 18.6 3.2 38 12-49 64-103 (136)
499 2hj1_A Hypothetical protein; s 23.7 7.3 0.00025 24.5 -1.7 36 23-63 59-95 (97)
500 1rvg_A Fructose-1,6-bisphospha 23.6 1.7E+02 0.006 21.7 5.6 39 12-51 192-253 (305)
No 1
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=99.89 E-value=5.4e-23 Score=159.38 Aligned_cols=84 Identities=43% Similarity=0.702 Sum_probs=76.2
Q ss_pred chHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCCCCCCCCccccccCCCCCCcccC
Q 046574 11 PHSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDY 90 (104)
Q Consensus 11 ~~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~~l~~~d~~~~~~~~~~~gy~d~ 90 (104)
...+..+|+.+..|||++|+.+++.|+++|++|.+|+|++||++|+|||||+|+++|+|++++|+++||+.+ .+||+||
T Consensus 275 ~~~a~~ik~~~~~~v~~~g~~~~~~ae~~l~~G~aD~V~~gR~~ladPdlp~k~~~g~pl~~~~~~t~y~~~-~~GY~dy 353 (358)
T 4a3u_A 275 PKLSPEIRKVFKPPLVLNQDYTFETAQAALDSGVADAISFGRPFIGNPDLPRRFFEKAPLTKDVIETWYTQT-PKGYTDY 353 (358)
T ss_dssp CCCHHHHHHHCCSCEEEESSCCHHHHHHHHHHTSCSEEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSCSS-STTTTCS
T ss_pred HHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCceEeHhhHHHHhChhHHHHHHhCCCCCCCchhcCCCCC-CCCcCCC
Confidence 356788999998888887777999999999999999999999999999999999999999999999999876 6999999
Q ss_pred CCCCC
Q 046574 91 PFLDT 95 (104)
Q Consensus 91 p~~~~ 95 (104)
|++++
T Consensus 354 p~~~e 358 (358)
T 4a3u_A 354 PLLGD 358 (358)
T ss_dssp CCC--
T ss_pred CCCCC
Confidence 99874
No 2
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=99.88 E-value=3.6e-23 Score=162.38 Aligned_cols=83 Identities=37% Similarity=0.689 Sum_probs=74.1
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCCCCCCCCccccccCCCCCCcccCC
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYP 91 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~~l~~~d~~~~~~~~~~~gy~d~p 91 (104)
.++.+|+.+++|||++|++ +..++++.+.+|.+|+|+|||+||+|||||+|+++|+||+++|+++||+.+ .+||+|||
T Consensus 309 ~~~~ir~~~~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~gR~~iadPdl~~k~~~G~pl~~~d~~tfy~~~-~~Gytdyp 387 (400)
T 4gbu_A 309 SNDFVYSIWKGPVIRAGNFALHPEVVREEVKDKRTLIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFYQMS-AHGYIDYP 387 (400)
T ss_dssp CSTHHHHHCCSCEEEESSCTTCHHHHHHHTTSTTEEEECCHHHHHCTTHHHHHHHTCCCBCCCGGGSSCSS-STTTTCCC
T ss_pred HHHHHHHHhCCCEEEeCCCCChHHHHHHHHcCCCeEhHHHHHHHHCcHHHHHHHcCCCCCCCChhhcCCCC-CCCcCCCc
Confidence 4456899999999999999 566666666677899999999999999999999999999999999999976 79999999
Q ss_pred CCCCc
Q 046574 92 FLDTS 96 (104)
Q Consensus 92 ~~~~~ 96 (104)
+++++
T Consensus 388 ~~~e~ 392 (400)
T 4gbu_A 388 TYEEA 392 (400)
T ss_dssp CHHHH
T ss_pred chHHH
Confidence 99865
No 3
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=99.87 E-value=5.4e-22 Score=154.56 Aligned_cols=88 Identities=42% Similarity=0.732 Sum_probs=78.1
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCCCCCCCCccccccCCCCCCcccCC
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYP 91 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~~l~~~d~~~~~~~~~~~gy~d~p 91 (104)
..++.||+.+++|||++|++++++|+++|++|.+|+|++||++|+||||++|+++|.+++++|+.+||+.+ .+||+|||
T Consensus 269 ~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~g~aD~V~iGR~~lanPdl~~k~~~g~~l~~~d~~~~y~~~-~~gy~dyp 347 (362)
T 4ab4_A 269 SIGPLIKEAFGGPYIVNERFDKASANAALASGKADAVAFGVPFIANPDLPARLAADAPLNEAHPETFYGKG-PVGYIDYP 347 (362)
T ss_dssp CCHHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHTTCCCCCCCGGGSSSSS-STTTTCSC
T ss_pred HHHHHHHHHCCCCEEEeCCCCHHHHHHHHHcCCccEEEECHHhHhCcHHHHHHHcCCCCCCCChhhccCCC-CCCccccc
Confidence 35778999999999999999999999999999999999999999999999999999999999999999876 68999999
Q ss_pred CCCCccccc
Q 046574 92 FLDTSSYVT 100 (104)
Q Consensus 92 ~~~~~~~~~ 100 (104)
+++++--..
T Consensus 348 ~~~~~~~~~ 356 (362)
T 4ab4_A 348 RLKLAAALE 356 (362)
T ss_dssp CCC------
T ss_pred ccchhhhhh
Confidence 998775443
No 4
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=99.86 E-value=1.1e-21 Score=152.69 Aligned_cols=83 Identities=46% Similarity=0.849 Sum_probs=77.9
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCCCCCCCCccccccCCCCCCcccCC
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYP 91 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~~l~~~d~~~~~~~~~~~gy~d~p 91 (104)
..++.+|+.+++|||++|++++++|+++|++|.+|+|++||++|+||||++|+++|.+++++|+.+||+.+ .+||+|||
T Consensus 277 ~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~G~aD~V~iGR~~ladPdl~~k~~~g~~l~~~~~~~~y~~~-~~gy~dyp 355 (361)
T 3gka_A 277 AIGQQLKAAFGGPFIVNENFTLDSAQAALDAGQADAVAWGKLFIANPDLPRRFKLNAPLNEPNAATFYAQG-EVGYTDYP 355 (361)
T ss_dssp CCHHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSCSS-STTTTCSC
T ss_pred HHHHHHHHHcCCCEEEeCCCCHHHHHHHHHcCCccEEEECHHhHhCcHHHHHHHhCCCCCCCccccccCCC-CCCcccCh
Confidence 45778999999999999999999999999999999999999999999999999999999999999999876 68999999
Q ss_pred CCCC
Q 046574 92 FLDT 95 (104)
Q Consensus 92 ~~~~ 95 (104)
++++
T Consensus 356 ~~~~ 359 (361)
T 3gka_A 356 ALES 359 (361)
T ss_dssp CCC-
T ss_pred hccc
Confidence 9874
No 5
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=99.85 E-value=4.8e-21 Score=150.69 Aligned_cols=82 Identities=60% Similarity=1.073 Sum_probs=75.5
Q ss_pred HHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCCCCCCCCccccc-cCCCCCCcccCC
Q 046574 13 SLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNAPLNKYNRETFY-VSDPVVGYTDYP 91 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~~l~~~d~~~~~-~~~~~~gy~d~p 91 (104)
.+..+|+.+++|||++|+|++++|+++|++|.+|+|++||++|+||+|++|+++|.+++++++.+|| +.+ .+||+|||
T Consensus 310 ~~~~vk~~~~iPvi~~G~i~~~~a~~~l~~g~aD~V~igR~~l~dP~l~~k~~~g~~l~~~~~~tfy~~~~-~~Gy~dyp 388 (402)
T 2hsa_B 310 LMRTLRNAYQGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAPLNKYNRKTFYTQDP-VVGYTDYP 388 (402)
T ss_dssp HHHHHHHHCSSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSCCCS-STTTTCSC
T ss_pred HHHHHHHHCCCCEEEeCCCCHHHHHHHHHCCCCceeeecHHHHhCchHHHHHHhCCCCCCCChhhcccCCC-CCCcccCc
Confidence 5677999999999999999999999999999999999999999999999999999999999999999 544 68999999
Q ss_pred CCCC
Q 046574 92 FLDT 95 (104)
Q Consensus 92 ~~~~ 95 (104)
++++
T Consensus 389 ~~~~ 392 (402)
T 2hsa_B 389 FLQG 392 (402)
T ss_dssp CC--
T ss_pred cchh
Confidence 9964
No 6
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=99.84 E-value=8.6e-21 Score=148.16 Aligned_cols=84 Identities=45% Similarity=0.788 Sum_probs=78.9
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCCCCCCCCccccccCCCCCCcccCC
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYP 91 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~~l~~~d~~~~~~~~~~~gy~d~p 91 (104)
..++.+|+.+++|||++|+|+++.|+++|++|.+|+|++||++|+||||++|+++|.+++++++.+||+.+ .+||+|||
T Consensus 289 ~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~~g~~l~~~~~~t~y~~~-~~gy~dyp 367 (377)
T 2r14_A 289 GFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTADAVAFGRPFIANPDLPERFRLGAALNEPDPSTFYGGA-EVGYTDYP 367 (377)
T ss_dssp THHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSSSS-STTTTCSC
T ss_pred HHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCceEEeecHHHHhCchHHHHHHcCCCCCCCCHHhcCCCC-CCCcccCc
Confidence 46778999999999999999999999999999999999999999999999999999999999999999876 68999999
Q ss_pred CCCCc
Q 046574 92 FLDTS 96 (104)
Q Consensus 92 ~~~~~ 96 (104)
++++.
T Consensus 368 ~~~~~ 372 (377)
T 2r14_A 368 FLDNG 372 (377)
T ss_dssp CCCCS
T ss_pred ccccc
Confidence 99754
No 7
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=99.84 E-value=9.5e-21 Score=148.07 Aligned_cols=80 Identities=39% Similarity=0.685 Sum_probs=76.3
Q ss_pred HHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCCCCCCCCccccccCCCCCCcccCCCC
Q 046574 14 LLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYPFL 93 (104)
Q Consensus 14 ~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~~l~~~d~~~~~~~~~~~gy~d~p~~ 93 (104)
++.+|+.+++|||++|+|++++|+++|++|.+|+|++||++|+||+|++|+++|.+++++++.+||+.+ .+||+|||++
T Consensus 299 ~~~ir~~~~iPvi~~G~it~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~~g~~l~~~~~~t~y~~~-~~gy~dyp~~ 377 (379)
T 3aty_A 299 VAWVRGSYSGVKISNLRYDFEEADQQIREGKVDAVAFGAKFIANPDLVERAQQNWPLNEPRPETYYTRT-AVGYNDYPTY 377 (379)
T ss_dssp HHHHHTTCCSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCCCCCCCGGGTTCSS-STTTTCCCCT
T ss_pred HHHHHHHCCCcEEEECCCCHHHHHHHHHcCCCeEEEecHHHHhCcHHHHHHHcCCCCCCCCHhhccCCC-CCCccCCccc
Confidence 778999999999999999999999999999999999999999999999999999999999999999865 6899999998
Q ss_pred C
Q 046574 94 D 94 (104)
Q Consensus 94 ~ 94 (104)
+
T Consensus 378 ~ 378 (379)
T 3aty_A 378 N 378 (379)
T ss_dssp T
T ss_pred C
Confidence 4
No 8
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=99.83 E-value=1.9e-20 Score=145.52 Aligned_cols=82 Identities=37% Similarity=0.664 Sum_probs=77.4
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCCCCCCCCccccccCCCCCCcccCC
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYP 91 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~~l~~~d~~~~~~~~~~~gy~d~p 91 (104)
..++.+|+.+++|||++|||+++.|+++|++|.+|+|++||++|+||+|++|+++|.+++++++.+||+.+ .+||+|||
T Consensus 283 ~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~igR~~i~~P~l~~~~~~g~~l~~~~~~~~y~~~-~~gy~dyp 361 (365)
T 2gou_A 283 SFKRALREAYQGVLIYAGRYNAEKAEQAINDGLADMIGFGRPFIANPDLPERLRHGYPLAEHVPATLFGGG-EKGLTDYP 361 (365)
T ss_dssp HHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHHTCCCCCCCGGGSSSSS-STTTTCCC
T ss_pred HHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCcceehhcHHHHhCchHHHHHHcCCCCCCCchhhccCCC-CCCCCCCc
Confidence 45778999999999999999999999999999999999999999999999999999999999999999875 68999999
Q ss_pred CCC
Q 046574 92 FLD 94 (104)
Q Consensus 92 ~~~ 94 (104)
+++
T Consensus 362 ~~~ 364 (365)
T 2gou_A 362 TYQ 364 (365)
T ss_dssp CCC
T ss_pred CcC
Confidence 985
No 9
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=99.83 E-value=2.6e-20 Score=144.68 Aligned_cols=81 Identities=40% Similarity=0.642 Sum_probs=76.5
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCCCCCCCCccccccCCCCCCcccCC
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYP 91 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~~l~~~d~~~~~~~~~~~gy~d~p 91 (104)
..++.+|+.+++|||++|+|++++|+++|++|.+|+|++||++|+||||++|+++|++++++++++||+.+ .+||+|||
T Consensus 284 ~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~~g~~l~~~~~~~~y~~~-~~gy~dyp 362 (364)
T 1vyr_A 284 AFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVAFGRDYIANPDLVARLQKKAELNPQRPESFYGGG-AEGYTDYP 362 (364)
T ss_dssp HHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSSSS-STTTTCSC
T ss_pred HHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCccEEEECHHHHhChhHHHHHHcCCCCCCCCHHhccCCC-CCCcCCCC
Confidence 46778999999999999999999999999999999999999999999999999999999999999999875 68999999
Q ss_pred CC
Q 046574 92 FL 93 (104)
Q Consensus 92 ~~ 93 (104)
++
T Consensus 363 ~~ 364 (364)
T 1vyr_A 363 SL 364 (364)
T ss_dssp CC
T ss_pred CC
Confidence 85
No 10
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=99.83 E-value=2.2e-20 Score=145.76 Aligned_cols=83 Identities=75% Similarity=1.332 Sum_probs=76.4
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCCCCCCCCccccc-cCCCCCCcccC
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNAPLNKYNRETFY-VSDPVVGYTDY 90 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~~l~~~d~~~~~-~~~~~~gy~d~ 90 (104)
..+..+|+.+++|||++|+|++++|+++|++|.+|+|++||++|+||+|++|+++|.+++++++.+|| +.+ .+||+||
T Consensus 291 ~~~~~vr~~~~iPvi~~G~i~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~~g~~l~~~~~~~~y~~~~-~~gy~dy 369 (376)
T 1icp_A 291 ESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRADLVAYGRLFISNPDLPKRFELNAPLNKYNRDTFYTSDP-IVGYTDY 369 (376)
T ss_dssp CCSHHHHHHCCSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSCCCS-STTTTCS
T ss_pred HHHHHHHHHcCCCEEEeCCCCHHHHHHHHHCCCCcEEeecHHHHhCccHHHHHHcCCCCCCCCHHHcccCCC-CCCcccC
Confidence 34578999999999999999999999999999999999999999999999999999999999999999 544 6899999
Q ss_pred CCCCC
Q 046574 91 PFLDT 95 (104)
Q Consensus 91 p~~~~ 95 (104)
|++++
T Consensus 370 p~~~~ 374 (376)
T 1icp_A 370 PFLET 374 (376)
T ss_dssp CCCC-
T ss_pred ccccc
Confidence 99965
No 11
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=99.81 E-value=1.9e-20 Score=147.99 Aligned_cols=82 Identities=29% Similarity=0.527 Sum_probs=74.1
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHc---CCCcEEecchHHhhCCcHHHHHhhCCCCCCCCccccccCCCCCCcc
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAE---GRADLVVYGRFFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYT 88 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~---g~~DlVa~gR~~lanPdl~~ri~~g~~l~~~d~~~~~~~~~~~gy~ 88 (104)
.++.+|+.+++|||++|+| +.++|++++++ |.+|+|+|||++|+||||++|+++|.+++++|+++||+++ ..||+
T Consensus 304 ~~~~ir~~~~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~iaNPdL~~ri~~g~~l~~~d~~tfy~~~-~~GY~ 382 (407)
T 3tjl_A 304 DNEFVSKIWKGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTSNPNLVWKLRDGIDLVPYDRNTFYSDN-NYGYN 382 (407)
T ss_dssp CSHHHHHHCCSEEEEESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHHCTTHHHHHHHTCCBCCCCGGGSSCSS-STTTG
T ss_pred HHHHHHHHhCCCEEecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhhCchHHHHHHcCCCCCCCccccccCCC-CCCcc
Confidence 4567999999999999999 56657777776 8899999999999999999999999999999999999876 57999
Q ss_pred cCCCCCC
Q 046574 89 DYPFLDT 95 (104)
Q Consensus 89 d~p~~~~ 95 (104)
|||++++
T Consensus 383 dyp~~~~ 389 (407)
T 3tjl_A 383 TFSMDSE 389 (407)
T ss_dssp GGGSCGG
T ss_pred cCcchhh
Confidence 9999976
No 12
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=99.44 E-value=2.7e-13 Score=104.35 Aligned_cols=63 Identities=24% Similarity=0.192 Sum_probs=57.7
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCCCCCCCC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNAPLNKYN 74 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~~l~~~d 74 (104)
..++.||+.+++|||++||| ++++|+++|++|.+|+|++||++|+||||++|++++.+.....
T Consensus 267 ~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~~l~~~~~~ 330 (340)
T 3gr7_A 267 PFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAARELGAKISA 330 (340)
T ss_dssp HHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHHHCCCCCCC
Confidence 46778999999999999999 9999999999999999999999999999999999998876433
No 13
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=99.39 E-value=8.7e-13 Score=101.59 Aligned_cols=61 Identities=25% Similarity=0.250 Sum_probs=56.4
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCCCCCC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNAPLNK 72 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~~l~~ 72 (104)
..++.+|+.+++|||++|+| ++++|+++|++|.+|+|++||++|+||||++|++.+.+...
T Consensus 278 ~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~l~~~~ 339 (349)
T 3hgj_A 278 PFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLRDPYFPLRAAKALGVAP 339 (349)
T ss_dssp HHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHHHTTCCC
T ss_pred HHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEEEecHHHHhCchHHHHHHHHCCCCC
Confidence 46778999999999999999 99999999999999999999999999999999999887653
No 14
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=99.38 E-value=5.9e-13 Score=102.85 Aligned_cols=56 Identities=23% Similarity=0.207 Sum_probs=52.5
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNA 68 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~ 68 (104)
..++.+|+.+++|||++|+| ++++|+++|++|.+|+|++||++|+||||++|++ |.
T Consensus 267 ~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~lanPdl~~k~~-~~ 323 (343)
T 3kru_A 267 KYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVALGRELLRNPYWVLHTY-TS 323 (343)
T ss_dssp HHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHTC-SS
T ss_pred hHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhcCCeEEEEEe-cc
Confidence 46778999999999999999 8999999999999999999999999999999999 54
No 15
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=99.35 E-value=1.4e-12 Score=99.85 Aligned_cols=59 Identities=22% Similarity=0.217 Sum_probs=55.3
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCCCC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNAPL 70 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~~l 70 (104)
..++.+++.+++|||++||| ++++|+++|++|.+|+|++||++|+||||++|+++|.+-
T Consensus 267 ~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~~~~~~ 326 (338)
T 1z41_A 267 SFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDPFFARTAAKQLNT 326 (338)
T ss_dssp HHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHhCchHHHHHHcCCCc
Confidence 46678999999999999999 999999999999999999999999999999999999864
No 16
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.34 E-value=1.8e-12 Score=100.41 Aligned_cols=59 Identities=22% Similarity=0.184 Sum_probs=55.2
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCCCC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNAPL 70 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~~l 70 (104)
..++.+|+.+++|||++||| ++++|+++|++|.+|+|++||++|+||||++|++.+..+
T Consensus 285 ~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~lg~ 344 (363)
T 3l5l_A 285 PIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLADPHWAYFAAKELGV 344 (363)
T ss_dssp HHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHhCchHHHHHHHHcCC
Confidence 46778999999999999999 899999999999999999999999999999999998764
No 17
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.33 E-value=8.2e-13 Score=108.42 Aligned_cols=58 Identities=19% Similarity=0.217 Sum_probs=54.4
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCCC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNAP 69 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~~ 69 (104)
..+..+|+.+++|||++|+| +++.|+++|++|.+|+|++||++|+||||++|+++|++
T Consensus 284 ~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P~~~~~~~~g~~ 342 (690)
T 3k30_A 284 EFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIRDGRL 342 (690)
T ss_dssp HHHTTSGGGCSSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHTTCG
T ss_pred HHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCccHHHHHHcCCc
Confidence 45667889999999999999 89999999999999999999999999999999999984
No 18
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=99.30 E-value=2.6e-12 Score=101.57 Aligned_cols=56 Identities=20% Similarity=0.342 Sum_probs=52.1
Q ss_pred hHHHHHHHHcC--CeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCCC
Q 046574 12 HSLLLMRKAFK--GTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNAP 69 (104)
Q Consensus 12 ~~~~~ir~~~~--~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~~ 69 (104)
..++.||+.++ +|||++||| ++++|+++|++ +|+|++||++|+||||++|+++|++
T Consensus 306 ~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~--aDlVaiGR~~IanPdlv~ki~~G~~ 364 (419)
T 3l5a_A 306 PVNQIVYEHLAGRIPLIASGGINSPESALDALQH--ADMVGMSSPFVTEPDFVHKLAEQRP 364 (419)
T ss_dssp BHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG--CSEEEESTHHHHCTTHHHHHHTTCG
T ss_pred HHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh--CCcHHHHHHHHHCcHHHHHHHcCCc
Confidence 46788999994 699999999 99999999998 9999999999999999999999984
No 19
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.29 E-value=2.7e-12 Score=106.23 Aligned_cols=59 Identities=27% Similarity=0.332 Sum_probs=55.0
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCCCC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNAPL 70 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~~l 70 (104)
..+..+|+.+++|||++|+| ++++|+++|++|.+|+|++||++|+||||++|+++|++.
T Consensus 281 ~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~~g~~~ 340 (729)
T 1o94_A 281 PWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPFLPQKVEQGRYD 340 (729)
T ss_dssp HHHHHHHTTCSSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHHCTTHHHHHHTTCGG
T ss_pred HHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhcCchHHHHHHcCCcc
Confidence 45678999999999999999 899999999999999999999999999999999999753
No 20
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.22 E-value=1.1e-11 Score=101.34 Aligned_cols=58 Identities=17% Similarity=0.253 Sum_probs=54.5
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCCC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNAP 69 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~~ 69 (104)
..++.+|+.+++|||++|+| +++.|+++|++|.+|+|++||++|+||||++|+++|++
T Consensus 270 ~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~~g~~ 328 (671)
T 1ps9_A 270 WVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQSGRA 328 (671)
T ss_dssp HHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHTTCG
T ss_pred HHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhCcHHHHHHHcCCC
Confidence 45677888899999999999 99999999999999999999999999999999999985
No 21
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=98.96 E-value=7.2e-10 Score=84.14 Aligned_cols=55 Identities=20% Similarity=0.227 Sum_probs=49.9
Q ss_pred hHHHHHHHHc--CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhh-CCcHHHHHhhC
Q 046574 12 HSLLLMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLA-NPDLPRRFEFN 67 (104)
Q Consensus 12 ~~~~~ir~~~--~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~la-nPdl~~ri~~g 67 (104)
..+..+++.+ ++|||++||| ++++|+++|..| +|+|.+||++|. ||+|++++++|
T Consensus 277 ~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~G-Ad~V~igr~~l~~~P~~~~~i~~~ 335 (336)
T 1f76_A 277 EIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAG-ASLVQIYSGFIFKGPPLIKEIVTH 335 (336)
T ss_dssp HHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHT-CSEEEESHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCC-CCEEEeeHHHHhcCcHHHHHHHhh
Confidence 3456788888 6899999999 999999999999 999999999999 99999999875
No 22
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=98.85 E-value=2.7e-09 Score=82.16 Aligned_cols=55 Identities=20% Similarity=0.266 Sum_probs=49.7
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCC
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNA 68 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~ 68 (104)
.....+++.+ ++|||++||| |+++++++++ | +|+|.+||+++.||+|+.+++++.
T Consensus 186 ~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-G-aD~V~iGRa~l~~P~l~~~i~~~l 242 (350)
T 3b0p_A 186 DWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-R-VDGVMLGRAVYEDPFVLEEADRRV 242 (350)
T ss_dssp HHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-T-SSEEEECHHHHHCGGGGTTHHHHT
T ss_pred HHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-C-CCEEEECHHHHhCcHHHHHHHHHh
Confidence 4567889998 8999999999 9999999997 7 999999999999999999998643
No 23
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=98.80 E-value=7.5e-09 Score=77.68 Aligned_cols=56 Identities=21% Similarity=0.260 Sum_probs=50.9
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhh-CCcHHHHHhhCC
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLA-NPDLPRRFEFNA 68 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~la-nPdl~~ri~~g~ 68 (104)
.....+++.+ ++|||++||| |+++|.+++..| +|+|.+||+++. +|+|+++++++.
T Consensus 233 ~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~G-Ad~V~ig~~~l~~~p~~~~~i~~~l 291 (314)
T 2e6f_A 233 ANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAG-ASMVQVGTALQEEGPGIFTRLEDEL 291 (314)
T ss_dssp HHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHT-CSSEEECHHHHHHCTTHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcC-CCEEEEchhhHhcCcHHHHHHHHHH
Confidence 3556788888 7899999999 999999999999 899999999997 999999999875
No 24
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=98.79 E-value=7.5e-09 Score=77.04 Aligned_cols=56 Identities=16% Similarity=0.146 Sum_probs=50.5
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNA 68 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~ 68 (104)
.....+++.+++|||++||| +++++.+++..| +|+|.+||+++.+|+++.+++++.
T Consensus 231 ~~i~~i~~~~~ipvia~GGI~~~~d~~~~l~~G-Ad~V~vg~~~l~~p~~~~~i~~~l 287 (311)
T 1ep3_A 231 KLIHQVAQDVDIPIIGMGGVANAQDVLEMYMAG-ASAVAVGTANFADPFVCPKIIDKL 287 (311)
T ss_dssp HHHHHHHTTCSSCEEECSSCCSHHHHHHHHHHT-CSEEEECTHHHHCTTHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcC-CCEEEECHHHHcCcHHHHHHHHHH
Confidence 34556777778899999999 999999999999 999999999999999999998865
No 25
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=98.78 E-value=3e-09 Score=80.52 Aligned_cols=52 Identities=21% Similarity=0.305 Sum_probs=45.9
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhh
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEF 66 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~ 66 (104)
.+..+++ ++|||++||| |+++++++++++.+|+|++||+++.||+|+.+++.
T Consensus 176 ~i~~i~~--~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~l~~~~~~ 228 (318)
T 1vhn_A 176 ALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKD 228 (318)
T ss_dssp GGGGSCC--SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTTHHHHHHH
T ss_pred HHHHHHc--CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcchHHHHHH
Confidence 3344555 7899999999 99999999996559999999999999999999988
No 26
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=98.75 E-value=1.4e-08 Score=76.10 Aligned_cols=55 Identities=15% Similarity=0.206 Sum_probs=49.9
Q ss_pred HHHHHHHHc--CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhh-CCcHHHHHhhCC
Q 046574 13 SLLLMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLA-NPDLPRRFEFNA 68 (104)
Q Consensus 13 ~~~~ir~~~--~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~la-nPdl~~ri~~g~ 68 (104)
....+++.+ ++|||++||| ++++|.+++..| +|+|.+||+++. +|+++++++++.
T Consensus 231 ~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~G-Ad~V~vg~~~l~~~p~~~~~i~~~l 289 (311)
T 1jub_A 231 NVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCG-ATMLQIGTALHKEGPAIFDRIIKEL 289 (311)
T ss_dssp HHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHT-CSEEEECHHHHHHCTHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcC-CCEEEEchHHHhcCcHHHHHHHHHH
Confidence 556678888 7899999999 999999999999 899999999997 999999999875
No 27
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=98.61 E-value=5.2e-08 Score=77.57 Aligned_cols=55 Identities=13% Similarity=0.088 Sum_probs=50.3
Q ss_pred HHHHHHHHc--CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhh-CCcHHHHHhhCC
Q 046574 13 SLLLMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLA-NPDLPRRFEFNA 68 (104)
Q Consensus 13 ~~~~ir~~~--~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~la-nPdl~~ri~~g~ 68 (104)
.+..+++.+ ++|||++||| |+++|.+.|..| +|+|.+||+++. +|+|+.+++++.
T Consensus 362 ~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aG-Ad~Vqigrall~~gP~l~~~i~~~l 420 (443)
T 1tv5_A 362 FICEMYNYTNKQIPIIASGGIFSGLDALEKIEAG-ASVCQLYSCLVFNGMKSAVQIKREL 420 (443)
T ss_dssp HHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTT-EEEEEESHHHHHHGGGHHHHHHHHH
T ss_pred HHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcC-CCEEEEcHHHHhcChHHHHHHHHHH
Confidence 456788888 6899999999 999999999999 999999999997 999999999875
No 28
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.60 E-value=8.6e-08 Score=69.63 Aligned_cols=54 Identities=22% Similarity=0.235 Sum_probs=49.4
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhh
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEF 66 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~ 66 (104)
..++.+++.+++|||++||| ++++++++++.| +|.|.+||.++.||+|+.++.+
T Consensus 69 ~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~G-ad~V~ig~~~l~dp~~~~~~~~ 123 (247)
T 3tdn_A 69 EMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRG-ADKVSINTAAVENPSLITQIAQ 123 (247)
T ss_dssp HHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTT-CSEECCSHHHHHCTHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcC-CCeeehhhHHhhChHHHHHHHH
Confidence 46677888888999999999 999999999998 9999999999999999988875
No 29
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=98.44 E-value=3.2e-07 Score=70.91 Aligned_cols=55 Identities=20% Similarity=0.262 Sum_probs=49.5
Q ss_pred HHHHHHHHc--CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchH-HhhCCcHHHHHhhCC
Q 046574 13 SLLLMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRF-FLANPDLPRRFEFNA 68 (104)
Q Consensus 13 ~~~~ir~~~--~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~-~lanPdl~~ri~~g~ 68 (104)
....+++.+ ++|||++||| |+++|.+.+..| +|+|.+||+ ++.+|.|+.+++++.
T Consensus 264 ~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aG-Ad~V~igra~~~~gP~~~~~i~~~L 322 (345)
T 3oix_A 264 NVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCG-ASMVQIGTALHQEGPQIFKRITKEL 322 (345)
T ss_dssp HHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHT-CSEEEESHHHHHHCTHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhC-CCEEEEChHHHhcChHHHHHHHHHH
Confidence 456788888 5799999999 999999999999 899999999 789999999998865
No 30
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=98.40 E-value=4.2e-07 Score=70.48 Aligned_cols=55 Identities=18% Similarity=0.260 Sum_probs=49.0
Q ss_pred HHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhC-CcHHHHHhhCC
Q 046574 13 SLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLAN-PDLPRRFEFNA 68 (104)
Q Consensus 13 ~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lan-Pdl~~ri~~g~ 68 (104)
....+++.. ++|||++||| ++++|.+.+..| +|+|.+||+++.| |.++.++.++.
T Consensus 267 ~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aG-Ad~V~vgra~l~~GP~~~~~i~~~l 324 (354)
T 4ef8_A 267 NINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAG-ASMVQVGTALQEEGPSIFERLTSEL 324 (354)
T ss_dssp HHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHT-EEEEEECHHHHHHCTTHHHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcC-CCEEEEhHHHHHhCHHHHHHHHHHH
Confidence 345677776 5799999999 999999999998 8999999999999 99999998865
No 31
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.38 E-value=4.1e-08 Score=71.35 Aligned_cols=54 Identities=22% Similarity=0.236 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhC
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFN 67 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g 67 (104)
..+.+++.+++|||++||| ++++++++++.| +|.|++||+++.+|++.+++++.
T Consensus 191 ~~~~i~~~~~iPvia~GGI~~~~d~~~~~~~G-ad~v~vg~al~~~p~~~~~~~~~ 245 (247)
T 3tdn_A 191 MIRFVRPLTTLPIIASGGAGKMEHFLEAFLRG-ADKVSINTAAVENPSLITQIAQT 245 (247)
T ss_dssp --------------------------------------------------------
T ss_pred HHHHHHHhCCCCEEEECCCCCHHHHHHHHHcC-CcHhhccHHHHcCcHHHHHHHHh
Confidence 4566777788899999999 799999999998 99999999999999999988753
No 32
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=98.38 E-value=6.4e-07 Score=69.62 Aligned_cols=56 Identities=18% Similarity=0.191 Sum_probs=49.7
Q ss_pred hHHHHHHHHc--CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHh-hCCcHHHHHhhCC
Q 046574 12 HSLLLMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFL-ANPDLPRRFEFNA 68 (104)
Q Consensus 12 ~~~~~ir~~~--~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~l-anPdl~~ri~~g~ 68 (104)
+....+++.+ ++|||++||| |+++|.+.+..| +|+|.+||+++ .+|.++.++.++.
T Consensus 286 ~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~G-Ad~V~vgra~l~~gP~~~~~i~~~l 345 (367)
T 3zwt_A 286 QTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAG-ASLVQLYTALTFWGPPVVGKVKREL 345 (367)
T ss_dssp HHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHT-CSEEEESHHHHHHCTHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcC-CCEEEECHHHHhcCcHHHHHHHHHH
Confidence 3556788888 6799999999 999999999999 89999999997 5799999998865
No 33
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=98.36 E-value=4.3e-07 Score=71.88 Aligned_cols=55 Identities=15% Similarity=0.108 Sum_probs=49.7
Q ss_pred HHHHHHHHc--CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhC-CcHHHHHhhCC
Q 046574 13 SLLLMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLAN-PDLPRRFEFNA 68 (104)
Q Consensus 13 ~~~~ir~~~--~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lan-Pdl~~ri~~g~ 68 (104)
....+++.+ ++|||++||| |+++|.+.+..| +|+|.+||+++.+ |.++.++.++.
T Consensus 334 ~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aG-Ad~VqIgra~l~~GP~~~~~i~~~L 392 (415)
T 3i65_A 334 FICEMYNYTNKQIPIIASGGIFSGLDALEKIEAG-ASVCQLYSCLVFNGMKSAVQIKREL 392 (415)
T ss_dssp HHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHT-EEEEEESHHHHHHGGGHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcC-CCEEEEcHHHHhcCHHHHHHHHHHH
Confidence 456678888 5799999999 999999999999 8999999999998 99999998875
No 34
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=98.26 E-value=1.6e-06 Score=65.80 Aligned_cols=57 Identities=19% Similarity=0.221 Sum_probs=50.0
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHH------HHHhhCCC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLP------RRFEFNAP 69 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~------~ri~~g~~ 69 (104)
..+..+++.+++|||++||| +++.+.+++..| +|.|.+||.|+.+|+++ +++..+..
T Consensus 152 ~ll~~i~~~~~iPViaaGGI~~~~~~~~al~~G-AdgV~vGs~~l~~~e~~~~~~~k~~~~~~~~ 215 (332)
T 2z6i_A 152 TLVRQVATAISIPVIAAGGIADGEGAAAGFMLG-AEAVQVGTRFVVAKESNAHPNYKEKILKARD 215 (332)
T ss_dssp HHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTT-CSEEEECHHHHTBTTCCSCHHHHHHHHHCCT
T ss_pred HHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-CCEEEecHHHhcCccccccHHHHHHHHhCCC
Confidence 35567788888999999999 799999999988 89999999999999988 88877664
No 35
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.23 E-value=2.5e-06 Score=61.55 Aligned_cols=55 Identities=24% Similarity=0.259 Sum_probs=48.8
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCC
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNA 68 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~ 68 (104)
.++.+++.++.|||+.|+| ++++++++++.| +|.|.+|+.++.+|+++.++.+..
T Consensus 66 ~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~G-ad~V~lg~~~l~~p~~~~~~~~~~ 121 (252)
T 1ka9_F 66 VVARVAERVFIPLTVGGGVRSLEDARKLLLSG-ADKVSVNSAAVRRPELIRELADHF 121 (252)
T ss_dssp HHHHHHTTCCSCEEEESSCCSHHHHHHHHHHT-CSEEEECHHHHHCTHHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEECCcCCHHHHHHHHHcC-CCEEEEChHHHhCcHHHHHHHHHc
Confidence 3566777778899999999 899999999999 899999999999999998887643
No 36
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.13 E-value=6.2e-06 Score=59.48 Aligned_cols=54 Identities=26% Similarity=0.310 Sum_probs=47.7
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhC
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFN 67 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g 67 (104)
..+.+++.++.||++.|+| ++++++++++.| +|.|.+|+..+.||+++.++...
T Consensus 65 ~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~G-ad~V~lg~~~l~~p~~~~~~~~~ 119 (253)
T 1thf_D 65 LVEKVAEQIDIPFTVGGGIHDFETASELILRG-ADKVSINTAAVENPSLITQIAQT 119 (253)
T ss_dssp HHHHHHTTCCSCEEEESSCCSHHHHHHHHHTT-CSEEEESHHHHHCTHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcC-CCEEEEChHHHhChHHHHHHHHH
Confidence 3456777778899999999 999999999998 89999999999999999888654
No 37
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.10 E-value=8.5e-06 Score=57.89 Aligned_cols=55 Identities=27% Similarity=0.296 Sum_probs=48.8
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFN 67 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g 67 (104)
...+.+++.++.||+++|++ ++++++++++.| +|+|.+++.++.+|+++.++...
T Consensus 67 ~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~G-ad~V~i~~~~~~~~~~~~~~~~~ 122 (253)
T 1h5y_A 67 DSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAG-ADKVSVNTAAVRNPQLVALLARE 122 (253)
T ss_dssp HHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHT-CSEEEESHHHHHCTHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-CCEEEEChHHhhCcHHHHHHHHH
Confidence 35567888888999999999 999999999999 89999999999999999887654
No 38
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=98.09 E-value=5.3e-06 Score=62.90 Aligned_cols=56 Identities=14% Similarity=0.170 Sum_probs=50.0
Q ss_pred hHHHHHHHHc--CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhC--CcHHHHHhhCC
Q 046574 12 HSLLLMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLAN--PDLPRRFEFNA 68 (104)
Q Consensus 12 ~~~~~ir~~~--~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lan--Pdl~~ri~~g~ 68 (104)
+..+.+++.+ +.||++.||| |+++++++++.| +|.|.+|..++.| |+++..+....
T Consensus 215 e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aG-AD~VVVGSAav~d~~Pelv~e~a~~~ 275 (286)
T 3vk5_A 215 EVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSG-ADYVGFAGALEQPDWRSALAEIAGRR 275 (286)
T ss_dssp HHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTT-CSEEEESGGGSSTTHHHHHHHHHC--
T ss_pred HHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcC-CCEEEECchhhcCCCHHHHHHHHHhC
Confidence 5778899999 7899999999 999999999999 8999999999999 99998888444
No 39
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.04 E-value=1.1e-05 Score=57.78 Aligned_cols=54 Identities=26% Similarity=0.215 Sum_probs=49.3
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhh
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEF 66 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~ 66 (104)
...+.+++.++.||++.|+| ++++++.+++.| +|.|.+|+.++.||+++.++..
T Consensus 64 ~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~G-ad~V~lg~~~l~~p~~~~~~~~ 118 (244)
T 2y88_A 64 ELLAEVVGKLDVQVELSGGIRDDESLAAALATG-CARVNVGTAALENPQWCARVIG 118 (244)
T ss_dssp HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTT-CSEEEECHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcC-CCEEEECchHhhChHHHHHHHH
Confidence 56678888889999999999 999999999998 8999999999999999988765
No 40
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.03 E-value=8.4e-06 Score=58.48 Aligned_cols=54 Identities=13% Similarity=0.083 Sum_probs=46.4
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHc---CCCcEEecchHHhhCCcHHHHHhh
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAE---GRADLVVYGRFFLANPDLPRRFEF 66 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~---g~~DlVa~gR~~lanPdl~~ri~~ 66 (104)
+..+.+++..+.|||++||| +++.+.++++. | +|.|.+||.++.+|.+...+++
T Consensus 183 ~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~~~~G-ad~v~vG~al~~~~~~~~~~~~ 240 (244)
T 2y88_A 183 DLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRG-VEGAIVGKALYARRFTLPQALA 240 (244)
T ss_dssp HHHHHHHTTCSSCEEEESCCCSHHHHHHHHTTGGGT-EEEEEECHHHHTTSSCHHHHHH
T ss_pred HHHHHHHHhCCCCEEEECCCCCHHHHHHHHhhccCC-CCEEEEcHHHHCCCcCHHHHHH
Confidence 35667777778899999999 79999999987 6 8999999999999988776654
No 41
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.02 E-value=1.3e-05 Score=57.70 Aligned_cols=55 Identities=20% Similarity=0.238 Sum_probs=49.6
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFN 67 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g 67 (104)
...+.+++.++.||++.|+| ++++++.+++.| +|.|.+|+.++.||+++.++...
T Consensus 65 ~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~G-ad~V~lg~~~l~~p~~~~~~~~~ 120 (244)
T 1vzw_A 65 ALIAEVAQAMDIKVELSGGIRDDDTLAAALATG-CTRVNLGTAALETPEWVAKVIAE 120 (244)
T ss_dssp HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTT-CSEEEECHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcC-CCEEEECchHhhCHHHHHHHHHH
Confidence 55677888889999999999 999999999998 89999999999999999887653
No 42
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=98.00 E-value=1e-05 Score=62.15 Aligned_cols=49 Identities=29% Similarity=0.329 Sum_probs=44.1
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHH
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLP 61 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~ 61 (104)
..+..+++.+++|||++||| +++.+.+++..| +|.|.+||.++.+|+++
T Consensus 198 ~~l~~i~~~~~iPViaaGGI~~~~~~~~~l~~G-Ad~V~vGs~~~~~~e~~ 247 (369)
T 3bw2_A 198 SLLAQVREAVDIPVVAAGGIMRGGQIAAVLAAG-ADAAQLGTAFLATDESG 247 (369)
T ss_dssp HHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTT-CSEEEESHHHHTSTTCC
T ss_pred HHHHHHHHhcCceEEEECCCCCHHHHHHHHHcC-CCEEEEChHHhCCcccC
Confidence 34566777788999999999 999999999999 89999999999999985
No 43
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.97 E-value=1.1e-05 Score=58.07 Aligned_cols=52 Identities=15% Similarity=0.215 Sum_probs=45.3
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhC
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFN 67 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g 67 (104)
..+.++ .++.||++.||+ ++++++++++.| +|.|.+|+.++.||+++.++ ..
T Consensus 65 ~i~~i~-~~~ipvi~~Ggi~~~~~~~~~~~~G-ad~V~lg~~~l~~p~~~~~~-~~ 117 (241)
T 1qo2_A 65 VLEKLS-EFAEHIQIGGGIRSLDYAEKLRKLG-YRRQIVSSKVLEDPSFLKSL-RE 117 (241)
T ss_dssp HHHHGG-GGGGGEEEESSCCSHHHHHHHHHTT-CCEEEECHHHHHCTTHHHHH-HT
T ss_pred HHHHHH-hcCCcEEEECCCCCHHHHHHHHHCC-CCEEEECchHhhChHHHHHH-HH
Confidence 334454 567899999999 999999999998 89999999999999999998 44
No 44
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.95 E-value=1.6e-05 Score=68.19 Aligned_cols=55 Identities=15% Similarity=0.198 Sum_probs=48.5
Q ss_pred HHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhh-CCcHHHHHhhCC
Q 046574 13 SLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLA-NPDLPRRFEFNA 68 (104)
Q Consensus 13 ~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~la-nPdl~~ri~~g~ 68 (104)
.+..+++.+ ++|||++||| |+++|.++|..| +|+|.+||+++. +|+++.++..+.
T Consensus 777 ~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~G-a~~v~vg~~~l~~~~~~~~~~~~~l 834 (1025)
T 1gte_A 777 AVTTIARALPGFPILATGGIDSAESGLQFLHSG-ASVLQVCSAVQNQDFTVIQDYCTGL 834 (1025)
T ss_dssp HHHHHHHHSTTCCEEEESSCCSHHHHHHHHHTT-CSEEEESHHHHTSCTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEecCcCCHHHHHHHHHcC-CCEEEEeeccccCCccHHHHHHHHH
Confidence 466788888 7899999999 999999999988 899999999997 888998887654
No 45
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=97.94 E-value=2.3e-05 Score=59.12 Aligned_cols=56 Identities=23% Similarity=0.324 Sum_probs=48.8
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCc------HHHHHhhCCC
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPD------LPRRFEFNAP 69 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPd------l~~ri~~g~~ 69 (104)
.+..+++.+++|||++||| +++.+.+++..| +|.|.+|+.|+..|+ +.+++.+..+
T Consensus 163 ~l~~v~~~~~iPviaaGGI~~~~~v~~al~~G-AdgV~vGs~~~~~~e~~~~~~~k~~~~~~~~ 225 (328)
T 2gjl_A 163 LLPAAANRLRVPIIASGGFADGRGLVAALALG-ADAINMGTRFLATRECPIHPAVKAAIRAADE 225 (328)
T ss_dssp HHHHHHTTCCSCEEEESSCCSHHHHHHHHHHT-CSEEEESHHHHTSSSSCSCHHHHHHHHHCCT
T ss_pred HHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-CCEEEECHHHHcCccccccHHHHHHHHhccc
Confidence 4556777778899999999 899999999988 899999999999999 8888877654
No 46
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=97.92 E-value=2.1e-05 Score=55.78 Aligned_cols=50 Identities=12% Similarity=0.111 Sum_probs=42.6
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
..+.+++.++.|||+.||| +++.+.++++.| +|.|.+|+.+.. |+++.+.
T Consensus 166 ~~~~~~~~~~ipvia~GGI~~~~~~~~~~~~G-ad~v~vG~al~~-p~~~~~~ 216 (223)
T 1y0e_A 166 FLKDVLQSVDAKVIAEGNVITPDMYKRVMDLG-VHCSVVGGAITR-PKEITKR 216 (223)
T ss_dssp HHHHHHHHCCSEEEEESSCCSHHHHHHHHHTT-CSEEEECHHHHC-HHHHHHH
T ss_pred HHHHHHhhCCCCEEEecCCCCHHHHHHHHHcC-CCEEEEChHHcC-cHHHHHH
Confidence 4566777788999999999 999999999998 899999999654 8776554
No 47
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=97.90 E-value=1.2e-05 Score=61.08 Aligned_cols=45 Identities=33% Similarity=0.524 Sum_probs=39.6
Q ss_pred HHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCC
Q 046574 13 SLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANP 58 (104)
Q Consensus 13 ~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanP 58 (104)
.+..+++.+ ++|||++||| +++++.++|..| +|+|.+||++|..+
T Consensus 246 ~l~~v~~~~~~ipvia~GGI~~~~d~~kal~~G-Ad~V~igr~~l~~~ 292 (332)
T 1vcf_A 246 AILEVREVLPHLPLVASGGVYTGTDGAKALALG-ADLLAVARPLLRPA 292 (332)
T ss_dssp HHHHHHHHCSSSCEEEESSCCSHHHHHHHHHHT-CSEEEECGGGHHHH
T ss_pred HHHHHHHhcCCCeEEEECCCCCHHHHHHHHHhC-CChHhhhHHHHHHH
Confidence 446677888 6899999999 999999999998 89999999999654
No 48
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=97.90 E-value=2.5e-05 Score=59.69 Aligned_cols=52 Identities=19% Similarity=0.267 Sum_probs=44.8
Q ss_pred HHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHh-hCCcHHHHHhhCC
Q 046574 16 LMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFL-ANPDLPRRFEFNA 68 (104)
Q Consensus 16 ~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~l-anPdl~~ri~~g~ 68 (104)
.+++.. +.|||.+||| |.++|.+.|..| +|+|.++++++ .+|.++.+|.++.
T Consensus 270 ~~~~~~~~~pIIg~GGI~s~~Da~e~i~aG-As~Vqv~Ta~~y~GP~~~~~I~~~L 324 (354)
T 3tjx_A 270 AFYRRCPGKLIFGCGGVYTGEDAFLHVLAG-ASMVQVGTALQEEGPSIFERLTSEL 324 (354)
T ss_dssp HHHHHCTTSEEEEESSCCSHHHHHHHHHHT-EEEEEECHHHHHHCTTHHHHHHHHH
T ss_pred HHHHhcCCCcEEEeCCcCCHHHHHHHHHcC-CCEEEEChhhhhcCchHHHHHHHHH
Confidence 344554 4699999999 999999999999 89999999987 6899999998765
No 49
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.90 E-value=2.5e-05 Score=57.36 Aligned_cols=54 Identities=20% Similarity=0.268 Sum_probs=48.3
Q ss_pred chHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhh
Q 046574 11 PHSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEF 66 (104)
Q Consensus 11 ~~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~ 66 (104)
.+..+.+++.+ +.||++.||| ++++|++++ .| +|.|.+|..++.||++..++.+
T Consensus 168 ~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~g-AD~VVVGSa~v~~p~~~~~~v~ 223 (228)
T 3vzx_A 168 IEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EH-ADVIVVGNAVYEDFDRALKTVA 223 (228)
T ss_dssp HHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TT-CSEEEECTHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hC-CCEEEEChHHhcCHHHHHHHHH
Confidence 35678899998 6899999999 999999998 66 8999999999999999998865
No 50
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.85 E-value=1.6e-05 Score=63.02 Aligned_cols=43 Identities=28% Similarity=0.443 Sum_probs=39.4
Q ss_pred cCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 21 FKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 21 ~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
.++|||++||| +++++.+++..| +|+|.+||+|+.+|+++...
T Consensus 339 ~~ipvia~GGI~~~~di~kala~G-Ad~V~iGr~~l~~~e~~~~~ 382 (494)
T 1vrd_A 339 YDVPIIADGGIRYSGDIVKALAAG-AESVMVGSIFAGTEEAPGET 382 (494)
T ss_dssp TTCCEEEESCCCSHHHHHHHHHTT-CSEEEESHHHHTBTTSSSEE
T ss_pred cCCCEEEECCcCCHHHHHHHHHcC-CCEEEECHHHhcCCcCCcce
Confidence 57899999999 999999999999 89999999999999997543
No 51
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.85 E-value=1.4e-05 Score=63.85 Aligned_cols=48 Identities=25% Similarity=0.365 Sum_probs=42.4
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHH
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLP 61 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~ 61 (104)
....+++.+++|||++||| +++++.+++..| +|+|++||+|+.+|+++
T Consensus 349 ~~~~~~~~~~ipVia~GGI~~~~di~kala~G-Ad~V~iG~~~l~~~e~~ 397 (514)
T 1jcn_A 349 KVAEYARRFGVPIIADGGIQTVGHVVKALALG-ASTVMMGSLLAATTEAP 397 (514)
T ss_dssp HHHHHHGGGTCCEEEESCCCSHHHHHHHHHTT-CSEEEESTTTTTSTTSS
T ss_pred HHHHHHhhCCCCEEEECCCCCHHHHHHHHHcC-CCeeeECHHHHcCCcCC
Confidence 3455667778999999999 899999999999 89999999999999865
No 52
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.85 E-value=4.7e-05 Score=54.77 Aligned_cols=52 Identities=15% Similarity=0.130 Sum_probs=44.0
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
+..+.+++.++.|||+.||| +++++.++++.| +|.|.+|+.++.+|.-+..+
T Consensus 186 ~~i~~l~~~~~ipvia~GGI~~~~d~~~~~~~G-adgv~vgsal~~~~~~~~~~ 238 (252)
T 1ka9_F 186 RLTRMVAEAVGVPVIASGGAGRMEHFLEAFQAG-AEAALAASVFHFGEIPIPKL 238 (252)
T ss_dssp HHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-CSEEEESHHHHTTSSCHHHH
T ss_pred HHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHCC-CHHHHHHHHHHcCCCCHHHH
Confidence 46677888889999999999 799999999766 89999999999999444433
No 53
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.73 E-value=8.6e-05 Score=53.38 Aligned_cols=50 Identities=20% Similarity=0.234 Sum_probs=42.8
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCC-cHHH
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANP-DLPR 62 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanP-dl~~ 62 (104)
+..+.+++.++.|||+.||| +++++.++++.| +|.|.+|+.++.+| ++..
T Consensus 185 ~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~G-adgv~vGsal~~~~~~~~~ 236 (253)
T 1thf_D 185 EMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG-ADAALAASVFHFREIDVRE 236 (253)
T ss_dssp HHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTT-CSEEEESHHHHTTCSCHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-ChHHHHHHHHHcCCCCHHH
Confidence 45667777778899999999 799999999877 89999999999999 5543
No 54
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.73 E-value=6.5e-05 Score=53.95 Aligned_cols=52 Identities=15% Similarity=0.121 Sum_probs=43.9
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHc---CCCcEEecchHHhhCCcHHHHH
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAE---GRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~---g~~DlVa~gR~~lanPdl~~ri 64 (104)
...+.+++.++.|||+.||| +++.+.++++. | +|.|.+|+.++.+|.-...+
T Consensus 180 ~~~~~i~~~~~ipvia~GGI~~~~d~~~~~~~~~~G-adgv~vG~al~~~~~~~~~~ 235 (244)
T 1vzw_A 180 ELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVPAG-VEGAIVGKALYAKAFTLEEA 235 (244)
T ss_dssp HHHHHHHHTCSSCEEEESCCCSHHHHHHHHTTGGGT-EEEEEECHHHHTTSSCHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhccCC-CceeeeeHHHHcCCCCHHHH
Confidence 46677888888999999999 78999999987 6 89999999999998444433
No 55
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.73 E-value=4.4e-05 Score=56.33 Aligned_cols=52 Identities=19% Similarity=0.316 Sum_probs=46.6
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCc-HHHHHh
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPD-LPRRFE 65 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPd-l~~ri~ 65 (104)
+..+.+++.. +.||++.||| ++++++++++ | +|.|.+|..++.+|+ ++.+++
T Consensus 171 ~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-g-Ad~VIVGSa~v~~~~~~~~~v~ 225 (240)
T 1viz_A 171 EAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-H-ADVIVVGNAVYEDFDRALKTVA 225 (240)
T ss_dssp HHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-T-CSEEEECTHHHHCHHHHHTHHH
T ss_pred HHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-C-CCEEEEChHHHhCHHHHHHHHH
Confidence 5677899988 8899999999 9999999887 6 899999999999999 887754
No 56
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=97.73 E-value=6.8e-05 Score=53.25 Aligned_cols=51 Identities=12% Similarity=0.087 Sum_probs=42.6
Q ss_pred HHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 13 SLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
..+.+++..+.||++.|||+++.+.++++.| +|.|++|+.++.++|....+
T Consensus 155 ~l~~~~~~~~~pvia~GGI~~~nv~~~~~~G-a~gv~vgs~i~~~~d~~~~~ 205 (221)
T 1yad_A 155 LLSDIKQRISIPVIAIGGMTPDRLRDVKQAG-ADGIAVMSGIFSSAEPLEAA 205 (221)
T ss_dssp HHHHHHHHCCSCEEEESSCCGGGHHHHHHTT-CSEEEESHHHHTSSSHHHHH
T ss_pred HHHHHHHhCCCCEEEECCCCHHHHHHHHHcC-CCEEEEhHHhhCCCCHHHHH
Confidence 4455666678899999999999999999988 89999999999988844433
No 57
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.72 E-value=2.9e-05 Score=56.39 Aligned_cols=54 Identities=19% Similarity=0.145 Sum_probs=38.3
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhh
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEF 66 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~ 66 (104)
+..+.+++.++.|||+.||| +++++.++++.| +|.|.+|+.++.+|+....+++
T Consensus 190 ~~i~~l~~~~~ipvia~GGI~~~ed~~~~~~~G-adgv~vgsal~~~~~~~~~~~~ 244 (266)
T 2w6r_A 190 EMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG-ADAALAASVFHFREIDMRELKE 244 (266)
T ss_dssp HHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHT-CSEEEESTTTC-----------
T ss_pred HHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHcC-CHHHHccHHHHcCCCCHHHHHH
Confidence 45667788888999999999 899999999877 8999999999999966665543
No 58
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=97.68 E-value=4.9e-05 Score=58.99 Aligned_cols=48 Identities=29% Similarity=0.365 Sum_probs=41.4
Q ss_pred HHHHHH---HcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHH
Q 046574 14 LLLMRK---AFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPR 62 (104)
Q Consensus 14 ~~~ir~---~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ 62 (104)
+..+++ ..++|||++||| +++++.+++..| +|+|.+||+|+..|+.+.
T Consensus 245 l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~G-Ad~V~iG~~~l~~~e~~~ 296 (404)
T 1eep_A 245 ICDVYEACNNTNICIIADGGIRFSGDVVKAIAAG-ADSVMIGNLFAGTKESPS 296 (404)
T ss_dssp HHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHT-CSEEEECHHHHTBTTSSS
T ss_pred HHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcC-CCHHhhCHHHhcCCCCCc
Confidence 444555 346899999999 899999999999 899999999999999873
No 59
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.66 E-value=0.00012 Score=52.66 Aligned_cols=54 Identities=20% Similarity=0.128 Sum_probs=45.7
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHc-----CCCcEEecchHHhhCCcHHHHHh
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAE-----GRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~-----g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
+..+.+++.++.|||++||| +++++.++++. |.+|.|.+|+.++..+.-+..++
T Consensus 178 ~~i~~l~~~~~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~~~~~~~~~ 237 (241)
T 1qo2_A 178 SLTKKIAIEAEVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEGILTVEVMK 237 (241)
T ss_dssp HHHHHHHHHHTCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTTSSCHHHHH
T ss_pred HHHHHHHHhcCCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcCCCCHHHHH
Confidence 45677888889999999999 89999999987 54899999999998887666554
No 60
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=97.63 E-value=0.0001 Score=51.69 Aligned_cols=52 Identities=25% Similarity=0.289 Sum_probs=44.7
Q ss_pred hHHHHHHHHc-CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 12 HSLLLMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
+..+.+++.+ +.|+++.|||+++.+.++++.| +|.|.+|++++..+|....+
T Consensus 148 ~~i~~l~~~~~~~~i~~~gGI~~~~~~~~~~~G-ad~vvvGsai~~~~d~~~~~ 200 (211)
T 3f4w_A 148 DDLITMLKVRRKARIAVAGGISSQTVKDYALLG-PDVVIVGSAITHAADPAGEA 200 (211)
T ss_dssp HHHHHHHHHCSSCEEEEESSCCTTTHHHHHTTC-CSEEEECHHHHTCSSHHHHH
T ss_pred HHHHHHHHHcCCCcEEEECCCCHHHHHHHHHcC-CCEEEECHHHcCCCCHHHHH
Confidence 4667788887 6799999999999999999888 89999999999988865444
No 61
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=97.61 E-value=8.2e-05 Score=54.90 Aligned_cols=54 Identities=11% Similarity=0.182 Sum_probs=47.3
Q ss_pred chHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhh
Q 046574 11 PHSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEF 66 (104)
Q Consensus 11 ~~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~ 66 (104)
.+..+.+|+.. +.||++.||| ++++|+++.+ | +|.|.+|..+..||+...++..
T Consensus 174 ~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-g-AD~VVVGSai~~~~~~~~e~v~ 229 (235)
T 3w01_A 174 VSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-I-ADTIIVGDIIYKDIKKALKTVK 229 (235)
T ss_dssp HHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-T-SSEEEECTHHHHCHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-C-CCEEEECCceecCHHHHHHHHH
Confidence 35678889988 7899999999 9999998875 6 8999999999999998887654
No 62
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=97.58 E-value=0.00011 Score=51.27 Aligned_cols=51 Identities=14% Similarity=0.262 Sum_probs=42.6
Q ss_pred HHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 13 SLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
..+.+++..+.|+++.|||+++.+.++++.| +|.|.+|+.+...||...++
T Consensus 153 ~l~~l~~~~~~pvia~GGI~~~nv~~~~~~G-a~gv~vgs~i~~~~d~~~~~ 203 (215)
T 1xi3_A 153 GLRKIVESVKIPVVAIGGINKDNAREVLKTG-VDGIAVISAVMGAEDVRKAT 203 (215)
T ss_dssp HHHHHHHHCSSCEEEESSCCTTTHHHHHTTT-CSEEEESHHHHTSSSHHHHH
T ss_pred HHHHHHHhCCCCEEEECCcCHHHHHHHHHcC-CCEEEEhHHHhCCCCHHHHH
Confidence 4556666778899999999999999998877 89999999999988865444
No 63
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=97.56 E-value=0.00011 Score=56.82 Aligned_cols=45 Identities=29% Similarity=0.385 Sum_probs=39.3
Q ss_pred hHHHHHHHHc--CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhC
Q 046574 12 HSLLLMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLAN 57 (104)
Q Consensus 12 ~~~~~ir~~~--~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lan 57 (104)
..+..+++.+ ++|||++||| +++++.++|..| +|+|.+||++|..
T Consensus 272 ~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalG-Ad~V~iGr~~l~~ 319 (368)
T 2nli_A 272 DTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASG-ADVVALGRPVLFG 319 (368)
T ss_dssp HHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTT-CSEEEECHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcC-CCEEEECHHHHHH
Confidence 3556677777 5799999999 999999999999 8999999999865
No 64
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.56 E-value=0.00024 Score=50.24 Aligned_cols=52 Identities=19% Similarity=0.159 Sum_probs=43.2
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
+..+.+++.++.||+++||+ +++++.++++.| +|.|.+|+.++.+++-...+
T Consensus 188 ~~i~~l~~~~~~pvia~GGi~~~~~~~~~~~~G-a~~v~vgsal~~~~~~~~~~ 240 (253)
T 1h5y_A 188 ELIRRVADSVRIPVIASGGAGRVEHFYEAAAAG-ADAVLAASLFHFRVLSIAQV 240 (253)
T ss_dssp HHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-CSEEEESHHHHTTSSCHHHH
T ss_pred HHHHHHHHhcCCCEEEeCCCCCHHHHHHHHHcC-CcHHHHHHHHHcCCCCHHHH
Confidence 45677888888899999999 689999999877 89999999999887444433
No 65
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=97.55 E-value=0.00015 Score=55.07 Aligned_cols=45 Identities=38% Similarity=0.455 Sum_probs=38.7
Q ss_pred HHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCC
Q 046574 13 SLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANP 58 (104)
Q Consensus 13 ~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanP 58 (104)
.+..+++.+ ++|||++||| +++++.+++..| +|+|.+||+++..+
T Consensus 241 ~l~~v~~~~~~ipvia~GGI~~~~d~~k~l~~G-Ad~V~iG~~~l~~~ 287 (349)
T 1p0k_A 241 SLAEIRSEFPASTMIASGGLQDALDVAKAIALG-ASCTGMAGHFLKAL 287 (349)
T ss_dssp HHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTT-CSEEEECHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEECCCCCHHHHHHHHHcC-CCEEEEcHHHHHHH
Confidence 345566666 6799999999 999999999998 89999999999863
No 66
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=97.53 E-value=0.00012 Score=55.51 Aligned_cols=49 Identities=20% Similarity=0.134 Sum_probs=41.0
Q ss_pred hHHHHHHHHcCCeE--EEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHH
Q 046574 12 HSLLLMRKAFKGTF--LVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLP 61 (104)
Q Consensus 12 ~~~~~ir~~~~~pv--i~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~ 61 (104)
+....+++..+.|| |++||| |+++|..+++.| +|.|.+||..+..+|-.
T Consensus 188 elI~~Ike~~~IPVV~IAnGGI~TpedA~~~le~G-aDGVmVGrAI~~s~DP~ 239 (291)
T 3o07_A 188 SLLKDVLEKGKLPVVNFAAGGVATPADAALLMQLG-CDGVFVGSGIFKSSNPV 239 (291)
T ss_dssp HHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHHHTT-CSCEEECGGGGGSSCHH
T ss_pred HHHHHHHHccCCCEEEecCCCCCCHHHHHHHHHhC-CCEEEEchHHhCCCCHH
Confidence 35667888878887 568999 999999999877 89999999999966643
No 67
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=97.51 E-value=0.00015 Score=51.71 Aligned_cols=47 Identities=19% Similarity=0.152 Sum_probs=39.4
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHH
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLP 61 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~ 61 (104)
...+.+++. +.||++.||| |++.+.++++.| +|.|.+|+.++. |...
T Consensus 177 ~~i~~~~~~-~ipvia~GGI~s~~~~~~~~~~G-ad~v~vGsal~~-p~~~ 224 (234)
T 1yxy_A 177 ALIEALCKA-GIAVIAEGKIHSPEEAKKINDLG-VAGIVVGGAITR-PKEI 224 (234)
T ss_dssp HHHHHHHHT-TCCEEEESCCCSHHHHHHHHTTC-CSEEEECHHHHC-HHHH
T ss_pred HHHHHHHhC-CCCEEEECCCCCHHHHHHHHHCC-CCEEEEchHHhC-hHHH
Confidence 345566666 7899999999 699999999998 899999999887 6544
No 68
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.47 E-value=0.00015 Score=55.17 Aligned_cols=44 Identities=30% Similarity=0.422 Sum_probs=38.8
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhC
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLAN 57 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lan 57 (104)
.+..+++.+++|||++||| ++.++.+++..| +|.|.+||+++.-
T Consensus 201 ~l~~v~~~~~ipVIa~GGI~~g~Dv~kalalG-AdaV~iGr~~l~t 245 (336)
T 1ypf_A 201 ALRWCAKAASKPIIADGGIRTNGDVAKSIRFG-ATMVMIGSLFAGH 245 (336)
T ss_dssp HHHHHHHTCSSCEEEESCCCSTHHHHHHHHTT-CSEEEESGGGTTC
T ss_pred HHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcC-CCEEEeChhhhcc
Confidence 4556777778999999999 999999999998 8999999999964
No 69
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=97.42 E-value=0.00041 Score=51.21 Aligned_cols=49 Identities=24% Similarity=0.272 Sum_probs=42.5
Q ss_pred chHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcH
Q 046574 11 PHSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDL 60 (104)
Q Consensus 11 ~~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl 60 (104)
...++.+++..+.||++.||| +++++.++++.| +|.|.+|..++..+|-
T Consensus 167 ~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~G-AdgViVGSAi~~a~dp 216 (264)
T 1xm3_A 167 PLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELG-ADGVLLNTAVSGADDP 216 (264)
T ss_dssp HHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTT-CSEEEESHHHHTSSSH
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcC-CCEEEEcHHHhCCCCH
Confidence 346778888888899999999 799999999998 8999999999976653
No 70
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=97.42 E-value=0.00017 Score=55.99 Aligned_cols=46 Identities=28% Similarity=0.280 Sum_probs=40.8
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANP 58 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanP 58 (104)
..+..+++.++.|||++||| +++++.+++..| +|.|.+||+++...
T Consensus 268 ~~l~~v~~~~~~pVia~GGI~~~~dv~kal~~G-AdaV~iGr~~l~~~ 314 (380)
T 1p4c_A 268 EVLAQSVAKTGKPVLIDSGFRRGSDIVKALALG-AEAVLLGRATLYGL 314 (380)
T ss_dssp GTHHHHHHHHCSCEEECSSCCSHHHHHHHHHTT-CSCEEESHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEECCCCCHHHHHHHHHhC-CcHhhehHHHHHHH
Confidence 35567888888899999999 999999999988 89999999999754
No 71
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.42 E-value=0.00026 Score=49.51 Aligned_cols=48 Identities=23% Similarity=0.223 Sum_probs=40.6
Q ss_pred HHHHHHc--CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHH
Q 046574 15 LLMRKAF--KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRR 63 (104)
Q Consensus 15 ~~ir~~~--~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~r 63 (104)
+.+|+.. +.|+++.|||+++.+.++++.| +|.|++||++...+|....
T Consensus 149 ~~i~~~~~~~~pi~v~GGI~~~~~~~~~~aG-ad~vvvGsaI~~~~dp~~~ 198 (207)
T 3ajx_A 149 GLLAAGEKARVPFSVAGGVKVATIPAVQKAG-AEVAVAGGAIYGAADPAAA 198 (207)
T ss_dssp HHHHHHHHHTSCEEEESSCCGGGHHHHHHTT-CSEEEESHHHHTSSSHHHH
T ss_pred HHHHHhhCCCCCEEEECCcCHHHHHHHHHcC-CCEEEEeeeccCCCCHHHH
Confidence 5566655 6799999999999999999998 7999999999998875443
No 72
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=97.40 E-value=0.00021 Score=50.42 Aligned_cols=51 Identities=18% Similarity=0.096 Sum_probs=42.3
Q ss_pred hHHHHHHHHcC-CeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHH
Q 046574 12 HSLLLMRKAFK-GTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRR 63 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~r 63 (104)
...+.+++.++ .|+++.|||+++.+.++++.| +|.|.+|+.+...+|...+
T Consensus 161 ~~l~~~~~~~~~~pvia~GGI~~~nv~~~~~~G-a~gv~vgs~i~~~~d~~~~ 212 (227)
T 2tps_A 161 SLIEAVRRQGISIPIVGIGGITIDNAAPVIQAG-ADGVSMISAISQAEDPESA 212 (227)
T ss_dssp HHHHHHHHTTCCCCEEEESSCCTTTSHHHHHTT-CSEEEESHHHHTSSCHHHH
T ss_pred HHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHcC-CCEEEEhHHhhcCCCHHHH
Confidence 45567777777 899999999999999998877 8999999999987764333
No 73
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=97.39 E-value=0.00026 Score=55.30 Aligned_cols=46 Identities=30% Similarity=0.286 Sum_probs=39.3
Q ss_pred hHHHHHHHHc--CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCC
Q 046574 12 HSLLLMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANP 58 (104)
Q Consensus 12 ~~~~~ir~~~--~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanP 58 (104)
..+..+++.+ ++|||++||| +++++.++|..| +|+|.+||+++...
T Consensus 295 ~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalG-Ad~V~iGr~~l~~~ 343 (392)
T 2nzl_A 295 DVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALG-AKAVFVGRPIVWGL 343 (392)
T ss_dssp HHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTT-CSEEEECHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhC-CCeeEECHHHHHHH
Confidence 3455677777 4799999999 999999999998 89999999999753
No 74
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=97.39 E-value=0.00029 Score=53.40 Aligned_cols=46 Identities=26% Similarity=0.332 Sum_probs=40.9
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCc
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPD 59 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPd 59 (104)
.+..+++.+++|||++||| +++.+.+++..| +|.|.+|+.|+..++
T Consensus 167 ll~~i~~~~~iPviaaGGI~~~~dv~~al~~G-A~gV~vGs~~~~~~e 213 (326)
T 3bo9_A 167 LVNKVSRSVNIPVIAAGGIADGRGMAAAFALG-AEAVQMGTRFVASVE 213 (326)
T ss_dssp HHHHHHHHCSSCEEEESSCCSHHHHHHHHHHT-CSEEEESHHHHTBSS
T ss_pred HHHHHHHHcCCCEEEECCCCCHHHHHHHHHhC-CCEEEechHHHcCcc
Confidence 4556777778999999999 799999999988 899999999998887
No 75
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=97.38 E-value=0.00029 Score=54.37 Aligned_cols=44 Identities=32% Similarity=0.277 Sum_probs=38.7
Q ss_pred HHHHHHHHc--CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhC
Q 046574 13 SLLLMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLAN 57 (104)
Q Consensus 13 ~~~~ir~~~--~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lan 57 (104)
.+..+++.+ ++|||++||| +++++.+++..| +|+|.+||+++..
T Consensus 269 ~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~G-AdaV~iGr~~l~~ 315 (370)
T 1gox_A 269 ALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALG-AAGVFIGRPVVFS 315 (370)
T ss_dssp HHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHT-CSEEEECHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcC-CCEEeecHHHHHH
Confidence 455677777 5799999999 999999999999 8999999999964
No 76
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=97.34 E-value=0.00036 Score=54.07 Aligned_cols=45 Identities=31% Similarity=0.293 Sum_probs=38.4
Q ss_pred hHHHHHHHHc--CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhC
Q 046574 12 HSLLLMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLAN 57 (104)
Q Consensus 12 ~~~~~ir~~~--~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lan 57 (104)
+.+..+++.+ ++|||++||| +++++.++|.-| +|+|.+||++|..
T Consensus 260 ~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalG-A~aV~iGr~~l~~ 307 (352)
T 3sgz_A 260 DALREVVAAVKGKIEVYMDGGVRTGTDVLKALALG-ARCIFLGRPILWG 307 (352)
T ss_dssp HHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTT-CSEEEESHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcC-CCEEEECHHHHHH
Confidence 3455666777 5799999999 999999999998 8999999999953
No 77
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=97.34 E-value=0.00023 Score=49.72 Aligned_cols=46 Identities=17% Similarity=0.207 Sum_probs=39.8
Q ss_pred HHHHHHHHc-CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcH
Q 046574 13 SLLLMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDL 60 (104)
Q Consensus 13 ~~~~ir~~~-~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl 60 (104)
.++.+++.+ +.||++.|||+++.+.++++.| +|.|++|+.++. +||
T Consensus 140 ~~~~l~~~~~~~pvia~GGI~~~~~~~~~~~G-a~~v~vGs~i~~-~d~ 186 (205)
T 1wa3_A 140 FVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAG-VLAVGVGSALVK-GTP 186 (205)
T ss_dssp HHHHHHTTCTTCEEEEBSSCCTTTHHHHHHHT-CSCEEECHHHHC-SCH
T ss_pred HHHHHHHhCCCCcEEEcCCCCHHHHHHHHHCC-CCEEEECccccC-CCH
Confidence 445566667 6899999999999999999999 899999999998 885
No 78
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=97.34 E-value=0.00028 Score=56.81 Aligned_cols=45 Identities=33% Similarity=0.273 Sum_probs=38.8
Q ss_pred HHHHHHHHc-------CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCC
Q 046574 13 SLLLMRKAF-------KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANP 58 (104)
Q Consensus 13 ~~~~ir~~~-------~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanP 58 (104)
.+..+++.+ ++|||++||| +++++.++|..| +|+|.+||++|...
T Consensus 387 ~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalG-AdaV~iGr~~l~~~ 439 (511)
T 1kbi_A 387 VLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLG-AKGVGLGRPFLYAN 439 (511)
T ss_dssp HHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHT-CSEEEECHHHHHHH
T ss_pred HHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcC-CCEEEECHHHHHHH
Confidence 445566666 5799999999 999999999999 89999999999765
No 79
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=97.32 E-value=0.00039 Score=49.53 Aligned_cols=51 Identities=25% Similarity=0.373 Sum_probs=42.0
Q ss_pred HHHHHHHHc-----CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 13 SLLLMRKAF-----KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 13 ~~~~ir~~~-----~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
..+.+|+.. +.|+++.|||+++.+.++++.| +|.|.+|+++...+|....+
T Consensus 165 ~i~~l~~~~~~~~~~~pi~v~GGI~~~n~~~~~~aG-ad~vvvgSaI~~a~dp~~a~ 220 (230)
T 1rpx_A 165 KISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAG-ANALVAGSAVFGAPDYAEAI 220 (230)
T ss_dssp HHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHHHT-CCEEEESHHHHTSSCHHHHH
T ss_pred HHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHcC-CCEEEEChhhhCCCCHHHHH
Confidence 345677766 6799999999999998988888 79999999999988865443
No 80
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=97.31 E-value=0.00042 Score=49.69 Aligned_cols=51 Identities=20% Similarity=0.273 Sum_probs=42.8
Q ss_pred HHHHHHHHc-CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 13 SLLLMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 13 ~~~~ir~~~-~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
..+.+|+.. +.|+++.|||+++.+.++++.| +|.|.+|+.+...||....+
T Consensus 163 ~i~~~~~~~~~~pi~v~GGI~~~ni~~~~~aG-aD~vvvGsai~~~~d~~~~~ 214 (228)
T 1h1y_A 163 KVRALRKKYPSLDIEVDGGLGPSTIDVAASAG-ANCIVAGSSIFGAAEPGEVI 214 (228)
T ss_dssp HHHHHHHHCTTSEEEEESSCSTTTHHHHHHHT-CCEEEESHHHHTSSCHHHHH
T ss_pred HHHHHHHhcCCCCEEEECCcCHHHHHHHHHcC-CCEEEECHHHHCCCCHHHHH
Confidence 456677777 6799999999889999999888 89999999999988865444
No 81
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.31 E-value=0.00042 Score=50.63 Aligned_cols=54 Identities=19% Similarity=0.219 Sum_probs=48.4
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhh
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEF 66 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~ 66 (104)
...+.+.+...+|+-+.||| +.++++.+++.| +|-|.++...+.||+|+.++..
T Consensus 65 ~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~G-adkVii~t~a~~~p~li~e~~~ 119 (243)
T 4gj1_A 65 ALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCG-VKRVVIGSMAIKDATLCLEILK 119 (243)
T ss_dssp HHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTT-CSEEEECTTTTTCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCeEeccccccHHHHHHHHHcC-CCEEEEccccccCCchHHHHHh
Confidence 45566777788999999999 999999999999 8999999999999999988766
No 82
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.30 E-value=0.00019 Score=51.95 Aligned_cols=55 Identities=16% Similarity=0.167 Sum_probs=45.1
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHh-h--CCcHHHHHhhC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFL-A--NPDLPRRFEFN 67 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~l-a--nPdl~~ri~~g 67 (104)
...+.+++.++.||++.||+ ++++++++++.| +|.|.+|+.++ . +|++..++...
T Consensus 64 ~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~G-ad~v~lg~~~~~~~~~~~~~~~~~~~ 122 (266)
T 2w6r_A 64 EMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG-ADKALAASVFHFREIDMRELKEYLKK 122 (266)
T ss_dssp HHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHT-CSEEECCCCC------CHHHHHHCC-
T ss_pred HHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-CcHhhhhHHHHhCCCCHHHHHHHHHH
Confidence 45667778788999999999 899999999988 89999999999 6 99999988543
No 83
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.26 E-value=0.00045 Score=53.32 Aligned_cols=36 Identities=33% Similarity=0.369 Sum_probs=34.4
Q ss_pred CeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCc
Q 046574 23 GTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPD 59 (104)
Q Consensus 23 ~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPd 59 (104)
+|||++||| +++++.+++..| +|+|.+||+|+..++
T Consensus 278 ipvia~GGI~~~~dv~kalalG-A~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 278 VHIIADGSIENSGDVVKAIACG-ADAVVLGSPLARAEE 314 (393)
T ss_dssp CEEEECSSCCSHHHHHHHHHHT-CSEEEECGGGGGSTT
T ss_pred eEEEEECCCCCHHHHHHHHHcC-CCEEEECHHHHcCCC
Confidence 899999999 999999999999 899999999999886
No 84
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=97.25 E-value=0.00048 Score=53.49 Aligned_cols=50 Identities=26% Similarity=0.404 Sum_probs=41.8
Q ss_pred HHHHHHHHcCC--eEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHH
Q 046574 13 SLLLMRKAFKG--TFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRR 63 (104)
Q Consensus 13 ~~~~ir~~~~~--pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~r 63 (104)
.+..|++..+. |||+.||| ++.++.++|..| +|+|.+||+|+...+-+-+
T Consensus 188 ~l~aI~~~~~~~~PVIAdGGI~~~~di~kALa~G-Ad~V~iGr~f~~t~Espg~ 240 (361)
T 3r2g_A 188 MLTCIQDCSRADRSIVADGGIKTSGDIVKALAFG-ADFVMIGGMLAGSAPTPGE 240 (361)
T ss_dssp HHHHHHHHTTSSSEEEEESCCCSHHHHHHHHHTT-CSEEEESGGGTTBTTSSSC
T ss_pred HHHHHHHHHHhCCCEEEECCCCCHHHHHHHHHcC-CCEEEEChHHhCCccCCce
Confidence 34566666654 99999999 899999999999 8999999999998875443
No 85
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.24 E-value=0.00039 Score=51.08 Aligned_cols=47 Identities=19% Similarity=0.315 Sum_probs=42.5
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcH
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDL 60 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl 60 (104)
+..+.+++.. +.||++.||| ++++++++++ | +|.|.+|..++.+|+-
T Consensus 179 ~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-g-Ad~VIVGSa~v~~~~~ 227 (234)
T 2f6u_A 179 ELVAEVKKVLDKARLFYGGGIDSREKAREMLR-Y-ADTIIVGNVIYEKGID 227 (234)
T ss_dssp HHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-H-SSEEEECHHHHHHCHH
T ss_pred HHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-C-CCEEEEChHHHhCHHH
Confidence 5678899998 8899999999 9999999987 7 8999999999999864
No 86
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=97.24 E-value=0.00034 Score=52.35 Aligned_cols=47 Identities=28% Similarity=0.297 Sum_probs=40.1
Q ss_pred hHHHHHHHHcCCeEE--EeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCc
Q 046574 12 HSLLLMRKAFKGTFL--VAGGY-DREDGNKAIAEGRADLVVYGRFFLANPD 59 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi--~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPd 59 (104)
+....+++..++||+ ++||| +++++.+++..| +|.|.+|+.++..+|
T Consensus 197 ~~i~~i~~~~~iPvi~~a~GGI~~~~d~~~~~~~G-adgV~vGsai~~~~~ 246 (305)
T 2nv1_A 197 ELLLQIKKDGKLPVVNFAAGGVATPADAALMMQLG-ADGVFVGSGIFKSDN 246 (305)
T ss_dssp HHHHHHHHHTSCSSCEEBCSCCCSHHHHHHHHHTT-CSCEEECGGGGGSSC
T ss_pred HHHHHHHHhcCCCEEEEeccCCCCHHHHHHHHHcC-CCEEEEcHHHHcCCC
Confidence 345667777778988 99999 999999999888 899999999998665
No 87
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=97.23 E-value=0.00058 Score=48.00 Aligned_cols=50 Identities=22% Similarity=0.296 Sum_probs=41.2
Q ss_pred HHHHHHHc-----CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 14 LLLMRKAF-----KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 14 ~~~ir~~~-----~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
.+.+|+.. +.|+++.|||+++.+.++++.| +|.|.+||++...+|....+
T Consensus 157 i~~~~~~~~~~~~~~~i~v~GGI~~~~~~~~~~~G-ad~vvvGsai~~~~d~~~a~ 211 (220)
T 2fli_A 157 VATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEAG-ANVFVAGSYLFKASDLVSQV 211 (220)
T ss_dssp HHHHHHHHHHTTCCCEEEEESSCCTTTHHHHHHHT-CCEEEESHHHHTSSCHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEECcCCHHHHHHHHHcC-CCEEEEChHHhCCCCHHHHH
Confidence 45667665 5799999999999998888888 89999999999988865443
No 88
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=97.23 E-value=0.00057 Score=52.69 Aligned_cols=47 Identities=23% Similarity=0.273 Sum_probs=38.9
Q ss_pred hHHHHHHHHcCCeE--EEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCc
Q 046574 12 HSLLLMRKAFKGTF--LVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPD 59 (104)
Q Consensus 12 ~~~~~ir~~~~~pv--i~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPd 59 (104)
+.+..+++..++|| |+.||| |++++..+++.| +|.|++|+.++..+|
T Consensus 230 ell~~i~~~~~IPVV~VAeGGI~Tpeda~~~l~~G-aDgV~VGsaI~~a~d 279 (330)
T 2yzr_A 230 EVLLEVKKLGRLPVVNFAAGGVATPADAALMMQLG-SDGVFVGSGIFKSEN 279 (330)
T ss_dssp HHHHHHHHHTSCSSEEEECSCCCSHHHHHHHHHTT-CSCEEESHHHHTSSC
T ss_pred HHHHHHHHhCCCCeEEEEECCCCCHHHHHHHHHcC-cCEEeeHHHHhcCCC
Confidence 44556777677887 699999 899999999997 899999999995444
No 89
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=97.21 E-value=0.00072 Score=54.74 Aligned_cols=54 Identities=17% Similarity=0.116 Sum_probs=45.7
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
+..+.+++.+++|||++||+ +++++.++++...+|.|.+||.+..++-....++
T Consensus 486 ~li~~l~~~~~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~~~~~~~~e~~ 540 (555)
T 1jvn_A 486 ELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEFTVNDVK 540 (555)
T ss_dssp HHHHHHHHHCSSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHHTTSCCHHHHH
T ss_pred HHHHHHHHhCCccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHHcCCCCHHHHH
Confidence 46677888889999999999 9999999998444899999999999986655554
No 90
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=97.21 E-value=0.00063 Score=52.78 Aligned_cols=43 Identities=30% Similarity=0.344 Sum_probs=37.3
Q ss_pred HHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhh
Q 046574 13 SLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLA 56 (104)
Q Consensus 13 ~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~la 56 (104)
.+..+++.++ +|||++||| ++.++.+++.-| +|+|.+||+++.
T Consensus 257 ~l~~v~~~~~~ipvia~GGI~~~~d~~kal~lG-A~~v~ig~~~l~ 301 (368)
T 3vkj_A 257 SIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALG-ADIAGMALPVLK 301 (368)
T ss_dssp HHHHHHHHSTTCEEEEESSCCSHHHHHHHHHHT-CSEEEECHHHHH
T ss_pred HHHHHHHHcCCCcEEEECCCCCHHHHHHHHHcC-CCEEEEcHHHHH
Confidence 3445777774 799999999 999999999998 899999999994
No 91
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=97.19 E-value=0.00052 Score=49.85 Aligned_cols=49 Identities=18% Similarity=0.153 Sum_probs=39.3
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHH
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRR 63 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~r 63 (104)
+..+.+++. +.|||+.||| +++++.++++.| +|.|.+|..+. +|+.+.+
T Consensus 172 ~li~~l~~~-~ipvIA~GGI~t~~d~~~~~~~G-adgV~VGsai~-~p~~~~~ 221 (229)
T 3q58_A 172 AMVTQLSHA-GCRVIAEGRYNTPALAANAIEHG-AWAVTVGSAIT-RIEHICQ 221 (229)
T ss_dssp HHHHHHHTT-TCCEEEESSCCSHHHHHHHHHTT-CSEEEECHHHH-CHHHHHH
T ss_pred HHHHHHHHc-CCCEEEECCCCCHHHHHHHHHcC-CCEEEEchHhc-ChHHHHH
Confidence 345566666 7899999999 899999999998 89999997766 5655433
No 92
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=97.15 E-value=0.00032 Score=54.22 Aligned_cols=45 Identities=29% Similarity=0.380 Sum_probs=40.1
Q ss_pred HcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 20 AFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 20 ~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
..++|||+.||| +++++.+++..| +|.|.+|+.|+..++.+....
T Consensus 205 ~~~iPVIA~GGI~~~~di~kala~G-Ad~V~vGs~~~~t~Esp~~~~ 250 (361)
T 3khj_A 205 KFGIPIIADGGIRYSGDIGKALAVG-ASSVMIGSILAGTEESPGEKE 250 (361)
T ss_dssp HHTCCEEEESCCCSHHHHHHHHHHT-CSEEEESTTTTTBTTSSCEEE
T ss_pred hcCCeEEEECCCCCHHHHHHHHHcC-CCEEEEChhhhcCCcCCcchh
Confidence 357899999999 999999999999 899999999999999875543
No 93
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=97.10 E-value=0.00084 Score=48.81 Aligned_cols=48 Identities=19% Similarity=0.124 Sum_probs=39.4
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHH
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPR 62 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ 62 (104)
+..+.+++. +.|||+.||| +++++.++++.| +|.|.+|..+. +|..+.
T Consensus 172 ~~i~~l~~~-~ipvIA~GGI~t~~d~~~~~~~G-adgV~VGsal~-~p~~~~ 220 (232)
T 3igs_A 172 PLVKALHDA-GCRVIAEGRYNSPALAAEAIRYG-AWAVTVGSAIT-RLEHIC 220 (232)
T ss_dssp HHHHHHHHT-TCCEEEESCCCSHHHHHHHHHTT-CSEEEECHHHH-CHHHHH
T ss_pred HHHHHHHhc-CCcEEEECCCCCHHHHHHHHHcC-CCEEEEehHhc-CHHHHH
Confidence 355667776 8899999999 899999999998 89999997776 565443
No 94
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=97.08 E-value=0.00095 Score=48.15 Aligned_cols=42 Identities=21% Similarity=0.247 Sum_probs=36.2
Q ss_pred hHHHHHHHHc--CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHH
Q 046574 12 HSLLLMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFF 54 (104)
Q Consensus 12 ~~~~~ir~~~--~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~ 54 (104)
+..+.+++.+ ++||+++||| |+++|.+.++.| +|+|+.+++.
T Consensus 163 ~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aG-A~~iG~s~~~ 207 (225)
T 1mzh_A 163 EEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAG-ADRIGTSSGI 207 (225)
T ss_dssp HHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTT-CSEEEESCHH
T ss_pred HHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhC-chHHHHccHH
Confidence 4567788887 5799999999 999999999998 8999988764
No 95
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=97.04 E-value=0.00083 Score=51.61 Aligned_cols=38 Identities=32% Similarity=0.558 Sum_probs=34.7
Q ss_pred cCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCc
Q 046574 21 FKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPD 59 (104)
Q Consensus 21 ~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPd 59 (104)
.++|||+.||| ++.++.++|.-| +|+|.+||+|+..++
T Consensus 222 ~~ipvIa~GGI~~g~di~kAlalG-A~~V~vG~~fl~~~E 260 (351)
T 2c6q_A 222 LKGHIISDGGCSCPGDVAKAFGAG-ADFVMLGGMLAGHSE 260 (351)
T ss_dssp TTCEEEEESCCCSHHHHHHHHHTT-CSEEEESTTTTTBTT
T ss_pred cCCcEEEeCCCCCHHHHHHHHHcC-CCceeccHHHhcCcc
Confidence 47899999999 999999999999 899999999997644
No 96
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.04 E-value=0.00075 Score=48.38 Aligned_cols=44 Identities=25% Similarity=0.263 Sum_probs=39.1
Q ss_pred chHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHh
Q 046574 11 PHSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFL 55 (104)
Q Consensus 11 ~~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~l 55 (104)
+...+.+++.++.|+|+.|+| +.++++++++.| +|.|+.+...|
T Consensus 139 p~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aG-A~aVsTs~~~L 183 (192)
T 3kts_A 139 PEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASG-AIAVTTSNKHL 183 (192)
T ss_dssp HHHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTT-EEEEEECCGGG
T ss_pred HHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcC-CeEEEeCCHHH
Confidence 456778999999999999999 999999999999 79999887655
No 97
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.03 E-value=0.00098 Score=49.20 Aligned_cols=46 Identities=13% Similarity=0.056 Sum_probs=40.6
Q ss_pred hHHHHHHHHc----CCeEEEeCCC-CHHHHHHHHHc--CCCcEEecchHH--hhCC
Q 046574 12 HSLLLMRKAF----KGTFLVAGGY-DREDGNKAIAE--GRADLVVYGRFF--LANP 58 (104)
Q Consensus 12 ~~~~~ir~~~----~~pvi~~Ggi-~~~~ae~~l~~--g~~DlVa~gR~~--lanP 58 (104)
+..+.+++.+ ++|||++||+ ++++++++++. | +|.|.+||.+ ..+|
T Consensus 191 eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G-~~gvivg~al~l~~g~ 245 (260)
T 2agk_A 191 LLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHG-KVDLTFGSSLDIFGGN 245 (260)
T ss_dssp HHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTT-CEEEECCTTBGGGTCS
T ss_pred HHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCC-CCEEEeeCCHHHcCCC
Confidence 4667788888 8999999999 99999999987 6 8999999997 6666
No 98
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=97.03 E-value=0.00077 Score=49.51 Aligned_cols=52 Identities=15% Similarity=0.148 Sum_probs=42.4
Q ss_pred HHHHHHHH--cCCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 13 SLLLMRKA--FKGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 13 ~~~~ir~~--~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
.++.+++. .+.||++.|||+++.+.++++.| +|.|++++.++..+|-...++
T Consensus 180 ~l~~~~~~~~~~iPvvAiGGI~~~ni~~~~~aG-a~gvav~sai~~a~dp~~a~~ 233 (243)
T 3o63_A 180 LVRVAAELGGDDKPWFAIGGINAQRLPAVLDAG-ARRIVVVRAITSADDPRAAAE 233 (243)
T ss_dssp HHHHHHTC---CCCEEEESSCCTTTHHHHHHTT-CCCEEESHHHHTCSSHHHHHH
T ss_pred HHHHHHHhccCCCCEEEecCCCHHHHHHHHHcC-CCEEEEeHHHhCCCCHHHHHH
Confidence 44556555 46899999999999999999999 899999999999888655443
No 99
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=97.02 E-value=0.00043 Score=48.65 Aligned_cols=45 Identities=13% Similarity=0.149 Sum_probs=38.4
Q ss_pred hHHHHHHHHcC--CeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhC
Q 046574 12 HSLLLMRKAFK--GTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLAN 57 (104)
Q Consensus 12 ~~~~~ir~~~~--~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lan 57 (104)
...+.+++.++ .||++.|||+++.+.++++.| +|.|++|+.+...
T Consensus 136 ~~~~~l~~~~~~~ipvia~GGI~~~~i~~~~~~G-a~gv~vGsai~~~ 182 (212)
T 2v82_A 136 QYIKALKAVLPSDIAVFAVGGVTPENLAQWIDAG-CAGAGLGSDLYRA 182 (212)
T ss_dssp HHHHHHHTTSCTTCEEEEESSCCTTTHHHHHHHT-CSEEEECTTTCCT
T ss_pred HHHHHHHHhccCCCeEEEeCCCCHHHHHHHHHcC-CCEEEEChHHhCC
Confidence 34556677775 799999999999999999988 8999999999876
No 100
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=96.98 E-value=0.001 Score=49.22 Aligned_cols=46 Identities=20% Similarity=0.186 Sum_probs=39.6
Q ss_pred HHHHHHHHcCCeEE--EeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCc
Q 046574 13 SLLLMRKAFKGTFL--VAGGY-DREDGNKAIAEGRADLVVYGRFFLANPD 59 (104)
Q Consensus 13 ~~~~ir~~~~~pvi--~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPd 59 (104)
..+.+++..+.|++ +.||| +++++.++++.| +|.|.+|+.++..+|
T Consensus 198 ~i~~l~~~~~~pvi~~a~GGI~~~e~i~~~~~aG-adgvvvGsai~~~~d 246 (297)
T 2zbt_A 198 LVKWVHDHGRLPVVNFAAGGIATPADAALMMHLG-MDGVFVGSGIFKSGD 246 (297)
T ss_dssp HHHHHHHHSSCSSCEEBCSSCCSHHHHHHHHHTT-CSEEEECGGGGGSSC
T ss_pred HHHHHHHhcCCCcEEEeeCCCCCHHHHHHHHHcC-CCEEEEchHHhCCCC
Confidence 45667777778988 99999 999999999998 899999999996554
No 101
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.92 E-value=0.001 Score=51.56 Aligned_cols=43 Identities=30% Similarity=0.444 Sum_probs=38.4
Q ss_pred HcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHH
Q 046574 20 AFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRR 63 (104)
Q Consensus 20 ~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~r 63 (104)
..++|||+.||| ++.++.+++..| +|.|.+|+.|+..++-+-.
T Consensus 209 ~~~iPVIA~GGI~~~~di~kala~G-Ad~V~vGs~f~~t~Esp~~ 252 (366)
T 4fo4_A 209 EYGIPVIADGGIRFSGDISKAIAAG-ASCVMVGSMFAGTEEAPGE 252 (366)
T ss_dssp GGTCCEEEESCCCSHHHHHHHHHTT-CSEEEESTTTTTBTTSSSC
T ss_pred hcCCeEEEeCCCCCHHHHHHHHHcC-CCEEEEChHhhcCCCCCch
Confidence 457899999999 999999999999 7999999999999886543
No 102
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=96.92 E-value=0.0018 Score=48.98 Aligned_cols=49 Identities=24% Similarity=0.292 Sum_probs=41.1
Q ss_pred hHHHHHHHHcCCeEE--EeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHH
Q 046574 12 HSLLLMRKAFKGTFL--VAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLP 61 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi--~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~ 61 (104)
+.+..+++.++.||+ +.||| +++++..+++.| +|.|.+|+.++..+|..
T Consensus 197 ~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~~G-AdgVlVGsai~~a~dp~ 248 (297)
T 4adt_A 197 DLILLTRKLKRLPVVNFAAGGIATPADAAMCMQLG-MDGVFVGSGIFESENPQ 248 (297)
T ss_dssp HHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHHTT-CSCEEESHHHHTSSCHH
T ss_pred HHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHcC-CCEEEEhHHHHcCCCHH
Confidence 345667777777776 89999 999999999998 89999999999876643
No 103
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=96.91 E-value=0.0023 Score=44.07 Aligned_cols=53 Identities=19% Similarity=0.149 Sum_probs=43.8
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhh
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEF 66 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~ 66 (104)
....+++..+.|+|+.||+ +++...+++..| +|.+.+|+.+..+|.-+..+++
T Consensus 165 ~i~~~~~~~~~Pvia~~g~~~~~~~~~~~~~G-~~~~~vg~a~~~~~~~~~~~~~ 218 (237)
T 3cwo_X 165 MIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG-ADAALAASVFHFREIDVRELKE 218 (237)
T ss_dssp HHHHHGGGCCSCEEEESCCCSHHHHHHHHHHT-CSEEEESHHHHTTSSCHHHHHH
T ss_pred HHHHHHHhcCCCEEecCCCCCHHHHHHHHHcC-cHHHhhhHHHHcCCCCHHHHHH
Confidence 4455666667899999999 899999999888 8999999999999976666544
No 104
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.91 E-value=0.0027 Score=47.27 Aligned_cols=53 Identities=15% Similarity=0.137 Sum_probs=44.1
Q ss_pred hHHHHHHHHc--CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 12 HSLLLMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 12 ~~~~~ir~~~--~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
+....+++.+ +.|||+.||| +++++.++++.| +|.|.+|..++..+|.-..++
T Consensus 201 ~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~G-adgvlVGsal~~a~dp~~~~~ 256 (272)
T 3qja_A 201 DCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAG-ADAVLVGEGLVTSGDPRAAVA 256 (272)
T ss_dssp THHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTT-CSEEEECHHHHTCSCHHHHHH
T ss_pred HHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcC-CCEEEEcHHHhCCCCHHHHHH
Confidence 3455677777 5799999999 799999999988 899999999999888655444
No 105
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=96.87 E-value=0.0035 Score=45.54 Aligned_cols=52 Identities=27% Similarity=0.285 Sum_probs=40.7
Q ss_pred hHHHHHHHHcCCeEEEeCCCC---HHH----HHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 12 HSLLLMRKAFKGTFLVAGGYD---RED----GNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~---~~~----ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
+..+.+++.++.||++.|||+ .++ +.++++.| +|.|++||.++..||....+
T Consensus 192 ~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~G-a~gv~vg~~i~~~~~~~~~~ 250 (273)
T 2qjg_A 192 DSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAMEAG-AAGVAVGRNIFQHDDVVGIT 250 (273)
T ss_dssp HHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHHHHT-CSEEECCHHHHTSSSHHHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHHcC-CcEEEeeHHhhCCCCHHHHH
Confidence 455667777789999999994 666 56666778 79999999999999765443
No 106
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=96.85 E-value=0.0017 Score=46.95 Aligned_cols=52 Identities=17% Similarity=0.316 Sum_probs=43.3
Q ss_pred hHHHHHHHHc-----CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 12 HSLLLMRKAF-----KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 12 ~~~~~ir~~~-----~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
+..+.+|+.. +.|+.+-|||+.+.+.++++.| +|.|.+|+.+...+|....+
T Consensus 158 ~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~aG-ad~vvvGSai~~a~d~~~~~ 214 (230)
T 1tqj_A 158 PKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAG-ANAIVAGSAVFNAPNYAEAI 214 (230)
T ss_dssp HHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHHHT-CCEEEESHHHHTSSCHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcEEEECCcCHHHHHHHHHcC-CCEEEECHHHHCCCCHHHHH
Confidence 3556677777 6799999999889999999888 89999999999988865444
No 107
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.82 E-value=0.0014 Score=46.37 Aligned_cols=46 Identities=17% Similarity=0.084 Sum_probs=38.5
Q ss_pred HHHHHHHH--cCCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCc
Q 046574 13 SLLLMRKA--FKGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPD 59 (104)
Q Consensus 13 ~~~~ir~~--~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPd 59 (104)
.++.+++. .+.|||+.|||+++.+.++++.| ++.|++++.+...+|
T Consensus 133 ~l~~~~~~~~~~iPviaiGGI~~~nv~~~~~~G-a~gVav~s~i~~~~d 180 (210)
T 3ceu_A 133 ELREAQKAKIIDSKVMALGGINEDNLLEIKDFG-FGGAVVLGDLWNKFD 180 (210)
T ss_dssp HHHHHHHTTCSSTTEEEESSCCTTTHHHHHHTT-CSEEEESHHHHTTCC
T ss_pred HHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhC-CCEEEEhHHhHcCCC
Confidence 44556665 47899999999999999999988 799999999987554
No 108
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=96.78 E-value=0.0016 Score=46.37 Aligned_cols=47 Identities=28% Similarity=0.303 Sum_probs=41.1
Q ss_pred hHHHHHHHHc-CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcH
Q 046574 12 HSLLLMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDL 60 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl 60 (104)
..++.++..+ +.|+++.|||+++.+.+.++.| +|.|++|..+.. +||
T Consensus 140 ~~lk~l~~~~~~ipvvaiGGI~~~n~~~~l~aG-a~~vavgSai~~-~d~ 187 (207)
T 2yw3_A 140 RVLRAYAEVFPEVRFLPTGGIKEEHLPHYAALP-NLLAVGGSWLLQ-GNL 187 (207)
T ss_dssp HHHHHHHHHCTTCEEEEBSSCCGGGHHHHHTCS-SBSCEEESGGGS-SCH
T ss_pred HHHHHHHhhCCCCcEEEeCCCCHHHHHHHHhCC-CcEEEEehhhhC-CCH
Confidence 4567788888 6899999999999999999999 799999999887 775
No 109
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=96.78 E-value=0.002 Score=50.60 Aligned_cols=49 Identities=24% Similarity=0.330 Sum_probs=40.6
Q ss_pred HHHHHHH---cCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHH
Q 046574 14 LLLMRKA---FKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRR 63 (104)
Q Consensus 14 ~~~ir~~---~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~r 63 (104)
...+++. .++|||+.||| +++++.+++..| +|.|.+|+.|+..++-+-.
T Consensus 235 l~~v~~~~~~~~IPVIA~GGI~~~~di~kalalG-Ad~V~vGt~f~~t~Es~~~ 287 (400)
T 3ffs_A 235 IEKCSSVASKFGIPIIADGGIRYSGDIGKALAVG-ASSVMIGSILAGTEESPGE 287 (400)
T ss_dssp HHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTT-CSEEEECGGGTTBTTSSCC
T ss_pred HHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcC-CCEEEEChHHhcCCCCCch
Confidence 3445443 46899999999 999999999998 8999999999999876543
No 110
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.74 E-value=0.0024 Score=47.02 Aligned_cols=51 Identities=20% Similarity=0.316 Sum_probs=42.6
Q ss_pred HHHHHHHHc-----CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 13 SLLLMRKAF-----KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 13 ~~~~ir~~~-----~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
....+.+.+ +.|+|+.||| +++++.++.+ | +|.|.+|..++..+|....++
T Consensus 194 ~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-G-a~gvlVGsAl~~~~d~~~~~~ 250 (254)
T 1vc4_A 194 TAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-L-FDAVLIGTSLMRAPDLEAALR 250 (254)
T ss_dssp HHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-T-CSEEEECHHHHTSSCHHHHHH
T ss_pred HHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-C-CCEEEEeHHHcCCCCHHHHHH
Confidence 344566655 6799999999 7999999998 7 899999999999999877654
No 111
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=96.70 E-value=0.0045 Score=46.41 Aligned_cols=47 Identities=21% Similarity=0.268 Sum_probs=41.2
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhh--CCc
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLA--NPD 59 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~la--nPd 59 (104)
+..+.+++..++|||+.||| +|++|..+++-| +|.|.+|-.+.. ||.
T Consensus 177 ~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeLG-AdgVlVgSAI~~a~dP~ 226 (265)
T 1wv2_A 177 YNLRIILEEAKVPVLVDAGVGTASDAAIAMELG-CEAVLMNTAIAHAKDPV 226 (265)
T ss_dssp HHHHHHHHHCSSCBEEESCCCSHHHHHHHHHHT-CSEEEESHHHHTSSSHH
T ss_pred HHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHcC-CCEEEEChHHhCCCCHH
Confidence 56788888888999999999 999999999998 899999998865 454
No 112
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=96.68 E-value=0.0014 Score=46.51 Aligned_cols=48 Identities=15% Similarity=0.082 Sum_probs=40.4
Q ss_pred hHHHHHHHHc--CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcH
Q 046574 12 HSLLLMRKAF--KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDL 60 (104)
Q Consensus 12 ~~~~~ir~~~--~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl 60 (104)
+..+.+|+.. +.|+++.|||+++.+.++++.| +|.|.+||+....+|-
T Consensus 151 ~~i~~lr~~~~~~~~i~v~GGI~~~~~~~~~~aG-ad~ivvG~~I~~a~dp 200 (216)
T 1q6o_A 151 ADITAIKRLSDMGFKVTVTGGLALEDLPLFKGIP-IHVFIAGRSIRDAASP 200 (216)
T ss_dssp HHHHHHHHHHHTTCEEEEESSCCGGGGGGGTTSC-CSEEEESHHHHTSSCH
T ss_pred HHHHHHHHhcCCCCcEEEECCcChhhHHHHHHcC-CCEEEEeehhcCCCCH
Confidence 4556777777 4579999999999999999888 7999999999987764
No 113
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=96.63 E-value=0.004 Score=45.12 Aligned_cols=51 Identities=22% Similarity=0.343 Sum_probs=42.0
Q ss_pred HHHHHHHcC-CeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 14 LLLMRKAFK-GTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 14 ~~~ir~~~~-~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
.+.+|+... .++.+.|||+++.+.++++.| +|.+.+||++...+|....++
T Consensus 160 i~~lr~~~~~~~I~VdGGI~~~t~~~~~~aG-Ad~~VvGsaIf~a~dp~~~~~ 211 (228)
T 3ovp_A 160 VHWLRTQFPSLDIEVDGGVGPDTVHKCAEAG-ANMIVSGSAIMRSEDPRSVIN 211 (228)
T ss_dssp HHHHHHHCTTCEEEEESSCSTTTHHHHHHHT-CCEEEESHHHHTCSCHHHHHH
T ss_pred HHHHHHhcCCCCEEEeCCcCHHHHHHHHHcC-CCEEEEeHHHhCCCCHHHHHH
Confidence 556776653 588899999999999999999 899999999998888765443
No 114
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=96.59 E-value=0.00058 Score=48.62 Aligned_cols=48 Identities=19% Similarity=0.090 Sum_probs=40.3
Q ss_pred hHHHHHHHHc--CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcH
Q 046574 12 HSLLLMRKAF--KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDL 60 (104)
Q Consensus 12 ~~~~~ir~~~--~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl 60 (104)
..++.+|+.. +.|+++.|||+++.+.++++.| +|.|++||++...+|-
T Consensus 154 ~~l~~i~~~~~~~~pi~v~GGI~~~~~~~~~~aG-Ad~vvvGsaI~~a~dp 203 (218)
T 3jr2_A 154 DDLDKMRQLSALGIELSITGGIVPEDIYLFEGIK-TKTFIAGRALAGAEGQ 203 (218)
T ss_dssp HHHHHHHHHHHTTCEEEEESSCCGGGGGGGTTSC-EEEEEESGGGSHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHcC-CCEEEEchhhcCCCCH
Confidence 4566787765 6799999999999999999988 8999999998865554
No 115
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=96.57 E-value=0.0091 Score=43.33 Aligned_cols=51 Identities=22% Similarity=0.364 Sum_probs=41.8
Q ss_pred HHHHHHHHc-CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 13 SLLLMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 13 ~~~~ir~~~-~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
..+.+|+.. +.++.+.|||+++.+.++++.| +|.+..|+.+...+|....+
T Consensus 163 ki~~lr~~~~~~~I~VdGGI~~~ti~~~~~aG-Ad~~V~GsaIf~~~d~~~~i 214 (227)
T 1tqx_A 163 KVSFLRKKYKNLNIQVDGGLNIETTEISASHG-ANIIVAGTSIFNAEDPKYVI 214 (227)
T ss_dssp HHHHHHHHCTTCEEEEESSCCHHHHHHHHHHT-CCEEEESHHHHTCSSHHHHH
T ss_pred HHHHHHHhccCCeEEEECCCCHHHHHHHHHcC-CCEEEEeHHHhCCCCHHHHH
Confidence 345677766 4688889999999999999999 89999999999887754443
No 116
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=96.57 E-value=0.0078 Score=44.97 Aligned_cols=53 Identities=13% Similarity=0.110 Sum_probs=44.7
Q ss_pred HHHHHHHHc--CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhh
Q 046574 13 SLLLMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEF 66 (104)
Q Consensus 13 ~~~~ir~~~--~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~ 66 (104)
....+.+.+ +.|+|+-||| +++++..+.+.| +|.|.+|..++..+|....+++
T Consensus 209 ~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~G-a~gvLVG~almr~~d~~~~~~~ 264 (272)
T 3tsm_A 209 VSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSG-IGTFLIGESLMRQHDVAAATRA 264 (272)
T ss_dssp HHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTT-CCEEEECHHHHTSSCHHHHHHH
T ss_pred HHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcC-CCEEEEcHHHcCCcCHHHHHHH
Confidence 445666777 4699999999 999999999888 8999999999999998766653
No 117
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.55 E-value=0.0027 Score=50.65 Aligned_cols=47 Identities=26% Similarity=0.370 Sum_probs=39.1
Q ss_pred HHHHHHHc---CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHH
Q 046574 14 LLLMRKAF---KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLP 61 (104)
Q Consensus 14 ~~~ir~~~---~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~ 61 (104)
...+.+.. ++|||+.||| +++++.+++..| +|.|.+|+.|+...+-+
T Consensus 321 l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~G-Ad~V~vGs~~~~~~Esp 371 (490)
T 4avf_A 321 IANVAAALEGTGVPLIADGGIRFSGDLAKAMVAG-AYCVMMGSMFAGTEEAP 371 (490)
T ss_dssp HHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHT-CSEEEECTTTTTBTTSS
T ss_pred HHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcC-CCeeeecHHHhcCCCCC
Confidence 34455533 6799999999 999999999999 79999999999877644
No 118
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.50 E-value=0.0033 Score=50.23 Aligned_cols=40 Identities=33% Similarity=0.482 Sum_probs=35.7
Q ss_pred cCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHH
Q 046574 21 FKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLP 61 (104)
Q Consensus 21 ~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~ 61 (104)
.++|||+.||| +++++.+++..| +|.|.+|+.|+...+-+
T Consensus 333 ~~iPVIa~GGI~~~~di~kala~G-Ad~V~iGs~f~~t~Esp 373 (496)
T 4fxs_A 333 YGIPVIADGGIRFSGDISKAIAAG-ASCVMVGSMFAGTEEAP 373 (496)
T ss_dssp GTCCEEEESCCCSHHHHHHHHHTT-CSEEEESTTTTTBTTSS
T ss_pred CCCeEEEeCCCCCHHHHHHHHHcC-CCeEEecHHHhcCCCCC
Confidence 36899999999 999999999998 89999999999877643
No 119
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.49 E-value=0.0036 Score=49.30 Aligned_cols=41 Identities=29% Similarity=0.511 Sum_probs=35.9
Q ss_pred HcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHH
Q 046574 20 AFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLP 61 (104)
Q Consensus 20 ~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~ 61 (104)
..++|||+.||| +++++.+++..| +|+|.+||+|+..++-+
T Consensus 334 ~~~ipvia~GGi~~~~di~kal~~G-A~~v~vG~~~~~~~e~~ 375 (491)
T 1zfj_A 334 EYGKTIIADGGIKYSGDIVKALAAG-GNAVMLGSMFAGTDEAP 375 (491)
T ss_dssp HTTCEEEEESCCCSHHHHHHHHHTT-CSEEEESTTTTTBSSCC
T ss_pred hcCCCEEeeCCCCCHHHHHHHHHcC-CcceeeCHHhhCCCcCc
Confidence 356899999999 999999999998 89999999999765543
No 120
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=96.47 E-value=0.0067 Score=43.35 Aligned_cols=44 Identities=25% Similarity=0.249 Sum_probs=38.2
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhC
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLAN 57 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lan 57 (104)
..+.+++.++.||++.||| +++.+.+++..| +|.|.+|+.+...
T Consensus 182 ~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~G-ad~vivGsai~~~ 226 (248)
T 1geq_A 182 LLRRAKRICRNKVAVGFGVSKREHVVSLLKEG-ANGVVVGSALVKI 226 (248)
T ss_dssp HHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-CSEEEECHHHHHH
T ss_pred HHHHHHhhcCCCEEEEeecCCHHHHHHHHHcC-CCEEEEcHHHHhh
Confidence 5567788778899999999 669999999888 8999999998865
No 121
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=96.47 E-value=0.0062 Score=42.89 Aligned_cols=50 Identities=22% Similarity=0.410 Sum_probs=40.3
Q ss_pred hHHHHHHHHcCC-eEEEeCCCCHH--HHHHHHHcCCCcEEecchHHhhCCcHHH
Q 046574 12 HSLLLMRKAFKG-TFLVAGGYDRE--DGNKAIAEGRADLVVYGRFFLANPDLPR 62 (104)
Q Consensus 12 ~~~~~ir~~~~~-pvi~~Ggi~~~--~ae~~l~~g~~DlVa~gR~~lanPdl~~ 62 (104)
+..+.+|+..+. ++|+.|||+++ .+.++++.| +|.|.+||+....+|..+
T Consensus 144 ~~i~~lr~~~~~~~~iv~gGI~~~g~~~~~~~~aG-ad~vvvGr~I~~a~dp~~ 196 (208)
T 2czd_A 144 ERIGYIRDRLKEGIKILAPGIGAQGGKAKDAVKAG-ADYIIVGRAIYNAPNPRE 196 (208)
T ss_dssp HHHHHHHHHSCTTCEEEECCCCSSTTHHHHHHHHT-CSEEEECHHHHTSSSHHH
T ss_pred HHHHHHHHhCCCCeEEEECCCCCCCCCHHHHHHcC-CCEEEEChHHhcCCCHHH
Confidence 355678888763 78899999766 788999998 799999999998777443
No 122
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=96.47 E-value=0.0028 Score=49.18 Aligned_cols=34 Identities=35% Similarity=0.347 Sum_probs=31.7
Q ss_pred CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhh
Q 046574 22 KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLA 56 (104)
Q Consensus 22 ~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~la 56 (104)
++|||++||| ++.++.++|.-| +|+|.+||++|.
T Consensus 278 ~ipvia~GGI~~g~Dv~KaLalG-AdaV~ig~~~l~ 312 (365)
T 3sr7_A 278 KVEILASGGIRHPLDIIKALVLG-AKAVGLSRTMLE 312 (365)
T ss_dssp TSEEEECSSCCSHHHHHHHHHHT-CSEEEESHHHHH
T ss_pred CCeEEEeCCCCCHHHHHHHHHcC-CCEEEECHHHHH
Confidence 4699999999 999999999999 799999999985
No 123
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.42 E-value=0.0042 Score=50.29 Aligned_cols=52 Identities=23% Similarity=0.136 Sum_probs=43.6
Q ss_pred HHHHHHHcCCeEEEeCCC-CH-----------HHHHHHHHcCCCcEEecchHHhh-------------CCcHHHHHhh
Q 046574 14 LLLMRKAFKGTFLVAGGY-DR-----------EDGNKAIAEGRADLVVYGRFFLA-------------NPDLPRRFEF 66 (104)
Q Consensus 14 ~~~ir~~~~~pvi~~Ggi-~~-----------~~ae~~l~~g~~DlVa~gR~~la-------------nPdl~~ri~~ 66 (104)
.+.+++.+.+||++.||| +. +.++++++.| +|.|.+|...+. ||+++.++..
T Consensus 319 i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aG-ad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~ 395 (555)
T 1jvn_A 319 LKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSG-ADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISK 395 (555)
T ss_dssp HHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHT-CSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHH
T ss_pred HHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHcC-CCEEEECCHHhhCchhhccccccccCHHHHHHHHH
Confidence 344445567899999999 76 6799999999 899999999987 5899999977
No 124
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=96.42 E-value=0.0036 Score=50.24 Aligned_cols=41 Identities=29% Similarity=0.424 Sum_probs=36.3
Q ss_pred HcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHH
Q 046574 20 AFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLP 61 (104)
Q Consensus 20 ~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~ 61 (104)
.+++|||+.||| ++.++.+++..| +|.|.+|++|+.-.+-+
T Consensus 357 ~~~iPVIa~GGI~~~~di~kala~G-A~~V~vGs~~~~~~es~ 398 (511)
T 3usb_A 357 KHGIPVIADGGIKYSGDMVKALAAG-AHVVMLGSMFAGVAESP 398 (511)
T ss_dssp TTTCCEEEESCCCSHHHHHHHHHTT-CSEEEESTTTTTBTTSS
T ss_pred hCCCcEEEeCCCCCHHHHHHHHHhC-chhheecHHHhcCccCc
Confidence 346899999999 999999999999 89999999998877644
No 125
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=96.36 E-value=0.0083 Score=43.54 Aligned_cols=43 Identities=21% Similarity=0.184 Sum_probs=37.4
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhh
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLA 56 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~la 56 (104)
..+.+++..+.||++.||| +++.+.++++.| +|.|.+|..+..
T Consensus 192 ~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~G-AdgvvVGSai~~ 235 (262)
T 1rd5_A 192 LIQEVKKVTNKPVAVGFGISKPEHVKQIAQWG-ADGVIIGSAMVR 235 (262)
T ss_dssp HHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-CSEEEECHHHHH
T ss_pred HHHHHHhhcCCeEEEECCcCCHHHHHHHHHcC-CCEEEEChHHHh
Confidence 5567888888899999999 599999999888 899999988764
No 126
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=96.31 E-value=0.0075 Score=44.97 Aligned_cols=43 Identities=19% Similarity=0.138 Sum_probs=38.3
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHh
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFL 55 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~l 55 (104)
+..+.+|+..+.||++.+|| +++++.+++..| +|.|.+|..++
T Consensus 198 ~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~g-ADgvIVGSAiv 241 (271)
T 3nav_A 198 ALLERLQQFDAPPALLGFGISEPAQVKQAIEAG-AAGAISGSAVV 241 (271)
T ss_dssp HHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTT-CSEEEESHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-CCEEEECHHHH
Confidence 45678888888899999999 899999898888 89999999887
No 127
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=96.30 E-value=0.013 Score=41.95 Aligned_cols=55 Identities=15% Similarity=0.170 Sum_probs=43.6
Q ss_pred cchHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 10 CPHSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 10 ~~~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
.....+.+|+.. +.|++.-||| +++.++.+.+.| +|.|.+|..++.-+|+...++
T Consensus 157 ~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~g-aDgvlVGsAi~~~~d~~~~~~ 213 (219)
T 2h6r_A 157 VEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLG-AEGVLLASGVVKAKNVEEAIR 213 (219)
T ss_dssp SHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTT-CCCEEESHHHHTCSSHHHHHH
T ss_pred HHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCC-CCEEEEcHHHhCcccHHHHHH
Confidence 345556677765 5799999999 688888877666 899999999999888876654
No 128
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=96.24 E-value=0.01 Score=43.54 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=38.8
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhh
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLA 56 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~la 56 (104)
+..+.+|+..+.||++.||| +++++.+++..| +|.|.+|..+..
T Consensus 195 ~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~ag-AD~vVVGSai~~ 239 (268)
T 1qop_A 195 HLIEKLKEYHAAPALQGFGISSPEQVSAAVRAG-AAGAISGSAIVK 239 (268)
T ss_dssp HHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTT-CSEEEECHHHHH
T ss_pred HHHHHHHhccCCcEEEECCCCCHHHHHHHHHcC-CCEEEEChHHhh
Confidence 56678888888899999999 699999988888 899999999863
No 129
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.22 E-value=0.0059 Score=48.34 Aligned_cols=43 Identities=28% Similarity=0.317 Sum_probs=36.3
Q ss_pred HHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCC
Q 046574 15 LLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANP 58 (104)
Q Consensus 15 ~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanP 58 (104)
..+.+.+++|||+.||| +..++.++|.-| +|+|.+|++|+...
T Consensus 321 ~~~~~~~~vpVia~GGi~~~~di~kalalG-A~~v~~g~~~~~~~ 364 (486)
T 2cu0_A 321 ADRAQEYGLYVIADGGIRYSGDIVKAIAAG-ADAVMLGNLLAGTK 364 (486)
T ss_dssp HHHHHHHTCEEEEESCCCSHHHHHHHHHTT-CSEEEESTTTTTBT
T ss_pred HHHHHHcCCcEEecCCCCCHHHHHHHHHcC-CCceeeChhhhcCc
Confidence 34555567899999999 999999999888 89999999999653
No 130
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=96.22 E-value=0.013 Score=43.95 Aligned_cols=44 Identities=16% Similarity=0.166 Sum_probs=38.8
Q ss_pred hHHHHHHH-HcC-CeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhh
Q 046574 12 HSLLLMRK-AFK-GTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLA 56 (104)
Q Consensus 12 ~~~~~ir~-~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~la 56 (104)
..++.+++ ..+ .|||+.||| ++++|..+++-| +|.|.+|.....
T Consensus 166 ~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLG-AdgVlVgSAI~~ 212 (268)
T 2htm_A 166 ALLELFAREKASLPPVVVDAGLGLPSHAAEVMELG-LDAVLVNTAIAE 212 (268)
T ss_dssp HHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTT-CCEEEESHHHHT
T ss_pred HHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcC-CCEEEEChHHhC
Confidence 45677888 567 899999999 999999999999 899999998876
No 131
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=96.10 E-value=0.014 Score=42.85 Aligned_cols=44 Identities=23% Similarity=0.212 Sum_probs=38.1
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLAN 57 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lan 57 (104)
+..+.+|+..+.||++.+|| +++++.+ +..| +|.|.+|..++..
T Consensus 196 ~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~~~g-ADgvIVGSai~~~ 240 (262)
T 2ekc_A 196 KKVEEYRELCDKPVVVGFGVSKKEHARE-IGSF-ADGVVVGSALVKL 240 (262)
T ss_dssp HHHHHHHHHCCSCEEEESSCCSHHHHHH-HHTT-SSEEEECHHHHHH
T ss_pred HHHHHHHhhcCCCEEEeCCCCCHHHHHH-HHcC-CCEEEECHHHHhh
Confidence 46677888888899999999 7999999 6777 8999999998864
No 132
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=96.00 E-value=0.012 Score=43.82 Aligned_cols=43 Identities=21% Similarity=0.159 Sum_probs=38.0
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHh
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFL 55 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~l 55 (104)
+..+.+|+..+.||++.+|| +++++.+++..| +|.|.+|..++
T Consensus 196 ~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~g-ADgvVVGSaiv 239 (267)
T 3vnd_A 196 NILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAG-AAGAISGSAVV 239 (267)
T ss_dssp HHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTT-CSEEEECHHHH
T ss_pred HHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcC-CCEEEECHHHH
Confidence 56677888888899999999 899999888888 89999999876
No 133
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=95.96 E-value=0.009 Score=43.41 Aligned_cols=50 Identities=22% Similarity=0.339 Sum_probs=40.9
Q ss_pred HHHHHHHcC-CeEEEeCCCCHH-----------HHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 14 LLLMRKAFK-GTFLVAGGYDRE-----------DGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 14 ~~~ir~~~~-~pvi~~Ggi~~~-----------~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
.+.+|+..+ .++++.|||+++ .+.++++.| +|++.+||+....+|..+.+
T Consensus 173 i~~lr~~~~~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aG-ad~iVvGr~I~~a~dp~~a~ 234 (245)
T 1eix_A 173 AVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAG-VDYMVIGRPVTQSVDPAQTL 234 (245)
T ss_dssp HHHHHHHHCSSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTT-CSEEEECHHHHTSSSHHHHH
T ss_pred HHHHHHhcCCCCEEEECCcCCCCCCccchhccCCHHHHHHcC-CCEEEECHHHcCCCCHHHHH
Confidence 667888775 578999999777 788999888 79999999999988854443
No 134
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=95.94 E-value=0.0032 Score=45.22 Aligned_cols=47 Identities=15% Similarity=0.207 Sum_probs=38.7
Q ss_pred chHHHHHHHHc-CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCC
Q 046574 11 PHSLLLMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANP 58 (104)
Q Consensus 11 ~~~~~~ir~~~-~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanP 58 (104)
...++.++..+ +.|++..|||+++.+.+.++.|.++.|+ |..+...+
T Consensus 144 ~~~lk~i~~~~~~ipvvaiGGI~~~n~~~~l~agg~~~v~-gS~i~~~~ 191 (214)
T 1wbh_A 144 VKALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLCIG-GSWLVPAD 191 (214)
T ss_dssp HHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHTSTTBSCEE-EGGGSCHH
T ss_pred HHHHHHHhhhCCCCeEEEECCCCHHHHHHHHhcCCCeEEE-eccccChh
Confidence 45667788888 6899999999999999999986689999 87766444
No 135
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=95.94 E-value=0.013 Score=43.44 Aligned_cols=43 Identities=19% Similarity=0.119 Sum_probs=37.0
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLAN 57 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lan 57 (104)
+..+.+|+..+.||++.||| +++++.++ .+ +|.|.+|..++..
T Consensus 192 ~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~--~~-ADgVIVGSAi~~~ 235 (271)
T 1ujp_A 192 DLVRRIKARTALPVAVGFGVSGKATAAQA--AV-ADGVVVGSALVRA 235 (271)
T ss_dssp HHHHHHHTTCCSCEEEESCCCSHHHHHHH--TT-SSEEEECHHHHHH
T ss_pred HHHHHHHhhcCCCEEEEcCCCCHHHHHHh--cC-CCEEEEChHHhcc
Confidence 56678888888899999999 79999996 56 8999999988754
No 136
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=95.90 E-value=0.004 Score=45.89 Aligned_cols=52 Identities=13% Similarity=0.093 Sum_probs=45.3
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhC-----CcHHHHHhh
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLAN-----PDLPRRFEF 66 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lan-----Pdl~~ri~~ 66 (104)
+..+.+.+.+..||.+.||+ +. ++++++ .| +|-|.+|-.++.| |+++.++..
T Consensus 66 ~~i~~i~~~~~~pv~vgGGir~~-~~~~~l-~G-a~~Viigs~a~~~~g~~~p~~~~~~~~ 123 (260)
T 2agk_A 66 DAAREALQESPQFLQVGGGINDT-NCLEWL-KW-ASKVIVTSWLFTKEGHFQLKRLERLTE 123 (260)
T ss_dssp HHHHHHHHHSTTTSEEESSCCTT-THHHHT-TT-CSCEEECGGGBCTTCCBCHHHHHHHHH
T ss_pred HHHHHHHhcCCceEEEeCCCCHH-HHHHHh-cC-CCEEEECcHHHhhcCCCCHHHHHHHHH
Confidence 35567778888999999999 55 899999 87 8999999999999 999998875
No 137
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=95.89 E-value=0.012 Score=46.81 Aligned_cols=36 Identities=28% Similarity=0.342 Sum_probs=33.0
Q ss_pred CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCC
Q 046574 22 KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANP 58 (104)
Q Consensus 22 ~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanP 58 (104)
++|||+.||| ++.++.+++.-| +|+|.+|++|+.-.
T Consensus 352 ~ipvia~GGi~~~~di~kAlalG-A~~V~iG~~~~~~~ 388 (503)
T 1me8_A 352 YIPVCSDGGIVYDYHMTLALAMG-ADFIMLGRYFARFE 388 (503)
T ss_dssp ECCEEEESCCCSHHHHHHHHHTT-CSEEEESHHHHTBT
T ss_pred CceEEEeCCCCCHHHHHHHHHcC-CCEEEECchhhccc
Confidence 5899999999 999999999999 79999999998653
No 138
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=95.88 E-value=0.011 Score=43.49 Aligned_cols=41 Identities=12% Similarity=0.158 Sum_probs=35.7
Q ss_pred CeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 23 GTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 23 ~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
.++.+.|||+++.+.++++.| +|.+.+|+++...+|....+
T Consensus 196 ~~I~VDGGI~~~ti~~~~~aG-AD~~V~GSaIf~a~dp~~~i 236 (246)
T 3inp_A 196 ILLEIDGGVNPYNIAEIAVCG-VNAFVAGSAIFNSDSYKQTI 236 (246)
T ss_dssp CEEEEESSCCTTTHHHHHTTT-CCEEEESHHHHTSSCHHHHH
T ss_pred eeEEEECCcCHHHHHHHHHcC-CCEEEEehHHhCCCCHHHHH
Confidence 578889999999999999999 89999999999888875544
No 139
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=95.75 E-value=0.0042 Score=44.98 Aligned_cols=45 Identities=11% Similarity=0.153 Sum_probs=37.4
Q ss_pred chHHHHHHHHc-CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhh
Q 046574 11 PHSLLLMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLA 56 (104)
Q Consensus 11 ~~~~~~ir~~~-~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~la 56 (104)
...++.++..+ +.|++.+|||+++.+.+.++.|.++.|+ |..+..
T Consensus 145 ~~~lk~l~~~~~~ipvvaiGGI~~~N~~~~l~agga~~v~-gS~i~~ 190 (224)
T 1vhc_A 145 VKMIKALLGPYAQLQIMPTGGIGLHNIRDYLAIPNIVACG-GSWFVE 190 (224)
T ss_dssp HHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHTSTTBCCEE-ECGGGC
T ss_pred HHHHHHHHhhCCCCeEEEECCcCHHHHHHHHhcCCCEEEE-EchhcC
Confidence 45667788888 5899999999999999999985589999 776654
No 140
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=95.69 E-value=0.013 Score=42.60 Aligned_cols=50 Identities=24% Similarity=0.303 Sum_probs=39.8
Q ss_pred HHHHHHHcC-CeEEEeCCCCHH-----------HHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 14 LLLMRKAFK-GTFLVAGGYDRE-----------DGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 14 ~~~ir~~~~-~pvi~~Ggi~~~-----------~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
.+.+|+..+ .++++.|||.++ .+.++++.| +|++.+||+....+|..+.+
T Consensus 167 i~~lr~~~~~~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aG-ad~iVvGr~I~~a~dp~~a~ 228 (246)
T 2yyu_A 167 AAFIKERCGASFLAVTPGIRFADDAAHDQVRVVTPRKARALG-SDYIVIGRSLTRAADPLRTY 228 (246)
T ss_dssp HHHHHHHHCTTSEEEECCCCCCC-------CCCCHHHHHHHT-CSEEEECHHHHTSSSHHHHH
T ss_pred HHHHHHhcCCCCEEEeCCcCCCCCCcccccccCCHHHHHHcC-CCEEEECHhhcCCCCHHHHH
Confidence 567887775 468999999666 688889888 79999999999887754433
No 141
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=95.58 E-value=0.01 Score=42.91 Aligned_cols=51 Identities=20% Similarity=0.234 Sum_probs=39.8
Q ss_pred hHHHHHHHHcC-CeEEEeCCCCHHHH-----------HHHHHcCCCcEEecchHHhhCCcHHHH
Q 046574 12 HSLLLMRKAFK-GTFLVAGGYDREDG-----------NKAIAEGRADLVVYGRFFLANPDLPRR 63 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi~~~~a-----------e~~l~~g~~DlVa~gR~~lanPdl~~r 63 (104)
+..+.+|+..+ .++++.|||+++.+ .++++.| +|++.+||+....||....
T Consensus 164 ~~i~~lr~~~~~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aG-ad~iVvGr~I~~a~dp~~a 226 (239)
T 1dbt_A 164 HEAKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATPAIAREKG-SSAIVVGRSITKAEDPVKA 226 (239)
T ss_dssp GGHHHHTTTSCTTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTT-CSEEEECHHHHTSSCHHHH
T ss_pred HHHHHHHHhcCCCcEEEeCCcCCCCCCccceeccCCHHHHHHcC-CCEEEEChhhcCCCCHHHH
Confidence 34556777765 47899999977666 7888888 7999999999988885443
No 142
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=95.55 E-value=0.032 Score=40.68 Aligned_cols=49 Identities=14% Similarity=0.203 Sum_probs=39.2
Q ss_pred HHHHHHHHc-----CCeEEEeCCCCHHHHHHHHH--cCCCcEEecchHHhhCCcHHHH
Q 046574 13 SLLLMRKAF-----KGTFLVAGGYDREDGNKAIA--EGRADLVVYGRFFLANPDLPRR 63 (104)
Q Consensus 13 ~~~~ir~~~-----~~pvi~~Ggi~~~~ae~~l~--~g~~DlVa~gR~~lanPdl~~r 63 (104)
..+.+|+.. +.++.+.|||+++.+.++++ .| +|.+.+|+.+... |....
T Consensus 173 ki~~lr~~~~~~~~~~~I~vdGGI~~~~~~~~~~~~aG-ad~~VvGSaIf~~-d~~~~ 228 (237)
T 3cu2_A 173 RVIQVEKRLGNRRVEKLINIDGSMTLELAKYFKQGTHQ-IDWLVSGSALFSG-ELKTN 228 (237)
T ss_dssp HHHHHHHHHGGGGGGCEEEEESSCCHHHHHHHHHSSSC-CCCEEECGGGGSS-CHHHH
T ss_pred HHHHHHHHHHhcCCCceEEEECCcCHHHHHHHHHhCCC-CcEEEEeeHHhCC-CHHHH
Confidence 334566665 46899999999999999999 88 8999999999975 64433
No 143
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=95.52 E-value=0.018 Score=41.79 Aligned_cols=45 Identities=20% Similarity=0.279 Sum_probs=37.6
Q ss_pred HHHHHHHc-----CCeEEEeCCCCHHHHHHHHHcCCCcEEecc-hHHhhCCc
Q 046574 14 LLLMRKAF-----KGTFLVAGGYDREDGNKAIAEGRADLVVYG-RFFLANPD 59 (104)
Q Consensus 14 ~~~ir~~~-----~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~g-R~~lanPd 59 (104)
.+.+|+.. +.++.+.|||+++.+.++++.| +|.+.+| +.+...+|
T Consensus 154 I~~lr~~~~~~~~~~~I~VdGGI~~~~~~~~~~aG-Ad~~V~G~saif~~~d 204 (231)
T 3ctl_A 154 LAELKAWREREGLEYEIEVDGSCNQATYEKLMAAG-ADVFIVGTSGLFNHAE 204 (231)
T ss_dssp HHHHHHHHHHHTCCCEEEEESCCSTTTHHHHHHHT-CCEEEECTTTTGGGCS
T ss_pred HHHHHHHHhccCCCceEEEECCcCHHHHHHHHHcC-CCEEEEccHHHhCCCC
Confidence 34566655 4688999999999999999999 8999999 99988766
No 144
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=95.49 E-value=0.041 Score=41.00 Aligned_cols=55 Identities=9% Similarity=0.083 Sum_probs=44.6
Q ss_pred HHHHHHHHcC--CeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCC
Q 046574 13 SLLLMRKAFK--GTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNA 68 (104)
Q Consensus 13 ~~~~ir~~~~--~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~ 68 (104)
....+.+.+. ..+|+-+|| +++++..+.+.| +|.|.+|-.|+.+||-...+.+|.
T Consensus 193 ~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G-~~a~LVGealmr~~d~~~~Li~G~ 250 (258)
T 4a29_A 193 NQRKLISMIPSNVVKVAKLGISERNEIEELRKLG-VNAFLISSSLMRNPEKIKELIEGS 250 (258)
T ss_dssp HHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTT-CCEEEECHHHHHCTTHHHHHHC--
T ss_pred HHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCC-CCEEEECHHHhCCCcHHHHHHcCc
Confidence 3445666663 467888999 999999999888 899999999999999888888876
No 145
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=95.47 E-value=0.012 Score=42.24 Aligned_cols=50 Identities=14% Similarity=0.048 Sum_probs=40.0
Q ss_pred hHHHHHHHHcC--CeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHH
Q 046574 12 HSLLLMRKAFK--GTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPR 62 (104)
Q Consensus 12 ~~~~~ir~~~~--~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ 62 (104)
+.++.+|+..+ .++.+.|||+++.+..+++.| +|.+.+||+....+|-..
T Consensus 156 ~e~~~ir~~~~~~~~i~v~gGI~~~~~~~~~~aG-ad~~VvG~~I~~a~dp~~ 207 (221)
T 3exr_A 156 KDLNKVKKLIEMGFRVSVTGGLSVDTLKLFEGVD-VFTFIAGRGITEAKNPAG 207 (221)
T ss_dssp HHHHHHHHHHHHTCEEEEESSCCGGGGGGGTTCC-CSEEEECHHHHTSSSHHH
T ss_pred HHHHHHHHhhcCCceEEEECCCCHHHHHHHHHCC-CCEEEECchhhCCCCHHH
Confidence 34667888763 468899999999888888888 799999999887666543
No 146
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=95.39 E-value=0.035 Score=40.82 Aligned_cols=52 Identities=23% Similarity=0.187 Sum_probs=39.5
Q ss_pred hHHHHHHHHcCC-eEEEeCCC---CHHHHHHHH----HcCCCcEEecchHHhhCCcHHHHH
Q 046574 12 HSLLLMRKAFKG-TFLVAGGY---DREDGNKAI----AEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 12 ~~~~~ir~~~~~-pvi~~Ggi---~~~~ae~~l----~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
+..+.+++..+. ||++.||+ +.+++.+.+ +.| ++.+++||..+..||-...+
T Consensus 185 e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aG-A~GvsvgraI~~~~dp~~~~ 244 (263)
T 1w8s_A 185 KTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAG-ALGIAVGRNVWQRRDALKFA 244 (263)
T ss_dssp HHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTT-CCEEEESHHHHTSTTHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcC-CeEEEEehhhcCCcCHHHHH
Confidence 456667777777 99999999 355554444 778 68999999999999854433
No 147
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=95.39 E-value=0.018 Score=41.51 Aligned_cols=53 Identities=21% Similarity=0.405 Sum_probs=41.1
Q ss_pred chHHHHHHHHcCCeEEEeCCCCHH--HHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 11 PHSLLLMRKAFKGTFLVAGGYDRE--DGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 11 ~~~~~~ir~~~~~pvi~~Ggi~~~--~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
++.+..+|+..+..+++++||.++ ..+++++.| +|++.+||+....+|-...+
T Consensus 139 ~~e~~~ir~~~~~f~~v~pGI~~~g~~~~~a~~~G-ad~iVvGr~I~~a~dp~~a~ 193 (215)
T 3ve9_A 139 PSMISRVKGDFPDKLVISPGVGTQGAKPGIALCHG-ADYEIVGRSVYQSADPVRKL 193 (215)
T ss_dssp HHHHHHHHHHCTTSEEEECCTTSTTCCTTHHHHTT-CSEEEECHHHHTSSSHHHHH
T ss_pred HHHHHHHHHhCCCcEEEcCCCCcCcCCHHHHHHcC-CCEEEeCHHHcCCCCHHHHH
Confidence 345667898886667778999655 677888888 79999999999988775443
No 148
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=95.28 E-value=0.024 Score=41.98 Aligned_cols=42 Identities=19% Similarity=0.182 Sum_probs=35.9
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHh
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFL 55 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~l 55 (104)
+..+++|+..+.||++.+|| ++++++++. ++ +|.|.+|..++
T Consensus 189 ~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~-~~-ADGVIVGSAiV 231 (252)
T 3tha_A 189 DKVKEIRSFTNLPIFVGFGIQNNQDVKRMR-KV-ADGVIVGTSIV 231 (252)
T ss_dssp HHHHHHHTTCCSCEEEESSCCSHHHHHHHT-TT-SSEEEECHHHH
T ss_pred HHHHHHHHhcCCcEEEEcCcCCHHHHHHHH-hc-CCEEEECHHHH
Confidence 35677888888899999999 999998875 45 99999999887
No 149
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=95.04 E-value=0.017 Score=41.96 Aligned_cols=49 Identities=16% Similarity=0.207 Sum_probs=37.5
Q ss_pred chHHHHHHHHcC-CeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHH
Q 046574 11 PHSLLLMRKAFK-GTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLP 61 (104)
Q Consensus 11 ~~~~~~ir~~~~-~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~ 61 (104)
...++.++..+. .|+|.+|||+++.+.+.++.| +++++.| .++..|+++
T Consensus 147 ~~~lkal~~p~p~i~~~ptGGI~~~N~~~~l~aG-a~~~vgG-s~l~~~~~i 196 (217)
T 3lab_A 147 AKLLKAWSGPFPDIQFCPTGGISKDNYKEYLGLP-NVICAGG-SWLTESKLL 196 (217)
T ss_dssp HHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHHST-TBCCEEE-SGGGCHHHH
T ss_pred HHHHHHHHhhhcCceEEEeCCCCHHHHHHHHHCC-CEEEEEC-hhhcChhHH
Confidence 456777877774 699999999999999999999 4665545 566666554
No 150
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=94.92 E-value=0.037 Score=44.84 Aligned_cols=51 Identities=12% Similarity=0.104 Sum_probs=40.7
Q ss_pred hHHHHHHHHc------CCeEEEeCCCCHHHHHHHHH--------cCCCcEEecchHHhhCCcHHHH
Q 046574 12 HSLLLMRKAF------KGTFLVAGGYDREDGNKAIA--------EGRADLVVYGRFFLANPDLPRR 63 (104)
Q Consensus 12 ~~~~~ir~~~------~~pvi~~Ggi~~~~ae~~l~--------~g~~DlVa~gR~~lanPdl~~r 63 (104)
+.++.+++.+ +.|+++-|||+++.+.+++. .| +|.|++++.++..+|-...
T Consensus 157 ~~l~~i~~~~~~~~~~~iPvvAIGGI~~~ni~~v~~~~~~~g~~~G-adgvAVvsaI~~a~dp~~a 221 (540)
T 3nl6_A 157 AGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRS-LDGICVVSDIIASLDAAKS 221 (540)
T ss_dssp HHHHHHHHHHHHTTCTTCEEEEESSCCTTTHHHHHHHCBCTTSSCB-CSCEEESHHHHTCTTHHHH
T ss_pred HHHHHHHHHHHhhccCCCCEEEEcCCCHHHHHHHHHhhcccccccC-ceEEEEeHHHhcCCCHHHH
Confidence 3445566653 68999999999999999997 45 8999999999998875433
No 151
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=94.88 E-value=0.016 Score=41.93 Aligned_cols=44 Identities=16% Similarity=0.169 Sum_probs=35.3
Q ss_pred hHHHHHHHHc-CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhh
Q 046574 12 HSLLLMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLA 56 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~la 56 (104)
..++.++..+ +.|++..|||+++.+.+.++.+.+|.|+ |..+..
T Consensus 155 ~~lk~i~~~~~~ipvvaiGGI~~~N~~~~l~~~Ga~~v~-gSai~~ 199 (225)
T 1mxs_A 155 AAIKAFGGPFGDIRFCPTGGVNPANVRNYMALPNVMCVG-TTWMLD 199 (225)
T ss_dssp HHHHHHHTTTTTCEEEEBSSCCTTTHHHHHHSTTBCCEE-ECTTSC
T ss_pred HHHHHHHhhCCCCeEEEECCCCHHHHHHHHhccCCEEEE-EchhcC
Confidence 4556677777 6799999999999999999943389999 776654
No 152
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=94.75 E-value=0.034 Score=39.61 Aligned_cols=39 Identities=21% Similarity=0.191 Sum_probs=31.6
Q ss_pred HHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHh
Q 046574 15 LLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFL 55 (104)
Q Consensus 15 ~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~l 55 (104)
+.+++..+.|+|+.|+| ++|++++ +++| +|.|+-+..-|
T Consensus 142 ~~I~~v~~~PiIaGGlI~t~edv~~-l~aG-A~aIsTs~~~L 181 (188)
T 1vkf_A 142 KVARKIPGRTVIAAGLVETEEEARE-ILKH-VSAISTSSRIL 181 (188)
T ss_dssp HHHTTSTTSEEEEESCCCSHHHHHH-HTTT-SSEEEECCHHH
T ss_pred HHHHHhcCCCEEEECCcCCHHHHHH-HHCC-CeEEEeCCHHH
Confidence 44544456799999999 9999999 9999 79999886654
No 153
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=94.50 E-value=0.029 Score=51.79 Aligned_cols=55 Identities=13% Similarity=0.149 Sum_probs=45.2
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHH-----------HcCCCcEEecchHHhhCC------cHHHHHhhCC
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAI-----------AEGRADLVVYGRFFLANP------DLPRRFEFNA 68 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l-----------~~g~~DlVa~gR~~lanP------dl~~ri~~g~ 68 (104)
....|++.+++|||+.||| +++.+..+| .-| +|.|.+|..|++-. .+-+.+....
T Consensus 746 lv~~i~~~~~ipviaaGGI~~g~~i~aaltg~ws~~~g~palG-AdgV~~GT~f~~t~Ea~~s~~~K~~lv~a~ 818 (2060)
T 2uva_G 746 MYSRIRKCSNIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMP-FDGCMFGSRMMTAKEAHTSKQAKQAIVDAP 818 (2060)
T ss_dssp HHHHHHTSTTEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCC-CSCEEESGGGGGBTTSCCCHHHHHHHHTSC
T ss_pred HHHHHHHHcCCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCC-CCEEEEchhhhcCcCCCCCHHHHHHHHhCC
Confidence 5567888888999999999 999999999 778 79999999999864 4555555543
No 154
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=94.42 E-value=0.096 Score=39.91 Aligned_cols=48 Identities=10% Similarity=0.059 Sum_probs=41.5
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCc
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPD 59 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPd 59 (104)
.....+++.+++||++.+.+ +++++++++++|.+|+|.+-...+-.+.
T Consensus 231 ~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit 279 (384)
T 2pgw_A 231 PAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICIGPREIGGIQ 279 (384)
T ss_dssp HHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHH
T ss_pred HHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhCCHH
Confidence 45677899999999999999 9999999999999999999777665553
No 155
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=94.28 E-value=0.046 Score=39.40 Aligned_cols=50 Identities=20% Similarity=0.317 Sum_probs=39.1
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHH--HHHHHHHcCCCcEEecchHHhhCCcHHH
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDRE--DGNKAIAEGRADLVVYGRFFLANPDLPR 62 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~--~ae~~l~~g~~DlVa~gR~~lanPdl~~ 62 (104)
+.+..+|+..+..+++++||.++ ..+++++.| +|.+.+||+...-+|-..
T Consensus 147 ~e~~~ir~~~~~~~~vtPGI~~~g~tp~~a~~~G-ad~iVVGR~I~~A~dP~~ 198 (222)
T 4dbe_A 147 DHITQYRRDFEKMTIVSPGMGSQGGSYGDAVCAG-ADYEIIGRSIYNAGNPLT 198 (222)
T ss_dssp HHHHHHHHHCTTCEEEECCBSTTSBCTTHHHHHT-CSEEEECHHHHTSSSHHH
T ss_pred HHHHHHHHhCCCCEEEcCCcccCccCHHHHHHcC-CCEEEECHHhcCCCCHHH
Confidence 45677898886667789999544 566778888 799999999999877543
No 156
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=94.20 E-value=0.1 Score=39.14 Aligned_cols=41 Identities=17% Similarity=0.185 Sum_probs=33.2
Q ss_pred HHHHHHc--CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhh
Q 046574 15 LLMRKAF--KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLA 56 (104)
Q Consensus 15 ~~ir~~~--~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~la 56 (104)
+.+.+.+ ..|++++|||+++.+.++.+.| +|+|++|...-+
T Consensus 231 k~av~~v~~~ipi~AsGGIt~eni~~~a~tG-vD~IsVgs~~~~ 273 (286)
T 1x1o_A 231 REAVRRVGGRVPLEASGNMTLERAKAAAEAG-VDYVSVGALTHS 273 (286)
T ss_dssp HHHHHHHTTSSCEEEESSCCHHHHHHHHHHT-CSEEECTHHHHS
T ss_pred HHHHHHhCCCCeEEEEcCCCHHHHHHHHHcC-CCEEEEcHHHcC
Confidence 3444444 4699999999999999999999 899999985544
No 157
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=94.07 E-value=0.08 Score=37.77 Aligned_cols=50 Identities=18% Similarity=0.224 Sum_probs=36.0
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHH----------HHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDRED----------GNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~----------ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
..++.+|+..+.+ ++++||.++. .++ ++.| +|.|.+||+....+|-...+
T Consensus 146 ~~~~~ir~~~~~~-~v~pGI~~~~~~~dq~rv~t~~~-i~aG-ad~iVvGR~I~~a~dP~~aa 205 (213)
T 1vqt_A 146 PWAKALREKIKGK-ILVPGIRMEVKADDQKDVVTLEE-MKGI-ANFAVLGREIYLSENPREKI 205 (213)
T ss_dssp HHHHHHTTTCCSC-EEECCBC---------CCBCHHH-HTTT-CSEEEESHHHHTSSCHHHHH
T ss_pred HHHHHHHHHCCCC-EEECCCCCCCCccchhhcCCHHH-HHCC-CCEEEEChhhcCCCCHHHHH
Confidence 3456677777667 8889996554 467 8888 79999999999888754433
No 158
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=94.04 E-value=0.029 Score=41.02 Aligned_cols=48 Identities=13% Similarity=0.176 Sum_probs=35.2
Q ss_pred chHHHHHHHHc-CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcH
Q 046574 11 PHSLLLMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDL 60 (104)
Q Consensus 11 ~~~~~~ir~~~-~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl 60 (104)
...++.++..+ +.|+|.+|||+++.+.+.++.| ++.++.|. +|.+|++
T Consensus 162 ~~~lkal~~p~p~ip~~ptGGI~~~n~~~~l~aG-a~~~vgGs-~l~~~~~ 210 (232)
T 4e38_A 162 ISMVKSLVGPYGDIRLMPTGGITPSNIDNYLAIP-QVLACGGT-WMVDKKL 210 (232)
T ss_dssp HHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHTST-TBCCEEEC-GGGCHHH
T ss_pred HHHHHHHHHHhcCCCeeeEcCCCHHHHHHHHHCC-CeEEEECc-hhcChHH
Confidence 35667777776 4699999999999999999988 45555554 4444443
No 159
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=94.04 E-value=0.05 Score=40.35 Aligned_cols=35 Identities=17% Similarity=0.174 Sum_probs=30.8
Q ss_pred CeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCC
Q 046574 23 GTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANP 58 (104)
Q Consensus 23 ~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanP 58 (104)
.+++++|||+++.+.+.++.| +|.|++|......|
T Consensus 230 ~~i~AsGGI~~~ni~~~~~aG-aD~i~vGs~i~~a~ 264 (273)
T 2b7n_A 230 VLLEASGNISLESINAYAKSG-VDAISVGALIHQAT 264 (273)
T ss_dssp CEEEEESSCCTTTHHHHHTTT-CSEEECTHHHHTCC
T ss_pred cEEEEECCCCHHHHHHHHHcC-CcEEEEcHHhcCCC
Confidence 699999999999999999999 79999998865444
No 160
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=93.82 E-value=0.1 Score=46.94 Aligned_cols=34 Identities=24% Similarity=0.147 Sum_probs=31.7
Q ss_pred CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhh
Q 046574 22 KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLA 56 (104)
Q Consensus 22 ~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~la 56 (104)
++|||+.||| +..++.+++.-| +|.|.+||++|.
T Consensus 1064 ~VpVIAdGGIrtG~DVakALaLG-AdaV~iGTafL~ 1098 (1479)
T 1ea0_A 1064 RVRLRTDGGLKTGRDIVIAAMLG-AEEFGIGTASLI 1098 (1479)
T ss_dssp TSEEEEESSCCSHHHHHHHHHTT-CSEEECCHHHHH
T ss_pred CceEEEECCCCCHHHHHHHHHcC-CCeeeEcHHHHH
Confidence 5799999999 999999999999 799999999986
No 161
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=93.66 E-value=0.094 Score=38.64 Aligned_cols=51 Identities=14% Similarity=0.169 Sum_probs=41.1
Q ss_pred HHHHHHHHc--CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 13 SLLLMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 13 ~~~~ir~~~--~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
....+.+.+ +.++|+-||| |++++..+.+. +|.|.+|..++..+|....++
T Consensus 191 ~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~--a~avLVG~aimr~~d~~~~~~ 244 (251)
T 1i4n_A 191 VLWELLPLVPDDTVVVAESGIKDPRELKDLRGK--VNAVLVGTSIMKAENPRRFLE 244 (251)
T ss_dssp HHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT--CSEEEECHHHHHCSSHHHHHH
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEcHHHcCCcCHHHHHH
Confidence 334555666 3589999999 89999999765 899999999999998776654
No 162
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=93.58 E-value=0.11 Score=46.79 Aligned_cols=34 Identities=21% Similarity=0.183 Sum_probs=31.8
Q ss_pred CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhh
Q 046574 22 KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLA 56 (104)
Q Consensus 22 ~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~la 56 (104)
.+|||+.||| +..++.+++.-| +|.|.+||++|.
T Consensus 1099 ~IpVIAdGGIrtG~DVakALaLG-AdaV~iGTafL~ 1133 (1520)
T 1ofd_A 1099 RVLLRADGGLKTGWDVVMAALMG-AEEYGFGSIAMI 1133 (1520)
T ss_dssp GCEEEEESSCCSHHHHHHHHHTT-CSEEECSHHHHH
T ss_pred CceEEEECCCCCHHHHHHHHHcC-CCeeEEcHHHHH
Confidence 4799999999 999999999999 799999999987
No 163
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=93.49 E-value=0.096 Score=39.86 Aligned_cols=40 Identities=8% Similarity=0.092 Sum_probs=35.7
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecc
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~g 51 (104)
.....+++.+++||++.+.+ +++++++++++|.+|+|.+-
T Consensus 227 ~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik 267 (379)
T 2rdx_A 227 EECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLK 267 (379)
T ss_dssp HHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEE
T ss_pred HHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEe
Confidence 45667888889999999999 99999999999999999883
No 164
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=93.29 E-value=0.16 Score=36.70 Aligned_cols=43 Identities=19% Similarity=0.224 Sum_probs=34.6
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhh
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLA 56 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~la 56 (104)
+..+.+++.+ ++|||++||+ +.++.+++ ..+ ++.|.+|+.|-.
T Consensus 185 ~l~~~l~~~~~~ipviasGGv~~~~Dl~~l-~~~-~~gvivg~Al~~ 229 (243)
T 4gj1_A 185 RLYKLIHEIFPNICIQASGGVASLKDLENL-KGI-CSGVIVGKALLD 229 (243)
T ss_dssp HHHHHHHHHCTTSEEEEESCCCSHHHHHHT-TTT-CSEEEECHHHHT
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCHHHHHHH-Hcc-CchhehHHHHHC
Confidence 4567788887 4799999999 99999775 555 889999998754
No 165
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=93.21 E-value=0.13 Score=38.71 Aligned_cols=41 Identities=12% Similarity=0.138 Sum_probs=36.3
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecch
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGR 52 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR 52 (104)
.....+++.+++||++.+.+ ++++++++++++.+|+|.+-.
T Consensus 230 ~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~ 271 (359)
T 1mdl_A 230 EGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDA 271 (359)
T ss_dssp HHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBT
T ss_pred HHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecc
Confidence 45667888889999999999 999999999999999998843
No 166
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=93.19 E-value=0.16 Score=38.49 Aligned_cols=48 Identities=15% Similarity=0.081 Sum_probs=38.1
Q ss_pred HHHHHHHcC-CeEEEeCCCCHH-----------HHHHHHHcCCCcEEecchHHhhCCcHHH
Q 046574 14 LLLMRKAFK-GTFLVAGGYDRE-----------DGNKAIAEGRADLVVYGRFFLANPDLPR 62 (104)
Q Consensus 14 ~~~ir~~~~-~pvi~~Ggi~~~-----------~ae~~l~~g~~DlVa~gR~~lanPdl~~ 62 (104)
+..||+..+ ..+++++||.++ .+.++++.| +|++.+||+....+|-..
T Consensus 182 ~~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aG-Ad~iVvGr~I~~a~dp~~ 241 (303)
T 3ru6_A 182 SKKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMARENL-SDYIVVGRPIYKNENPRA 241 (303)
T ss_dssp HHHHHHHSCTTSEEEECCCCTTC--------CCSHHHHHHTT-CSEEEECHHHHTSSCHHH
T ss_pred HHHHHHhCCCccEEECCCcCcccCCcccccccCCHHHHHHcC-CCEEEEChHHhCCCCHHH
Confidence 567899886 478889999543 467888888 799999999998777543
No 167
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=93.02 E-value=0.1 Score=40.04 Aligned_cols=38 Identities=18% Similarity=0.247 Sum_probs=32.0
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecch
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGR 52 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR 52 (104)
....+++.+++|||+ ||+ ++++|+.+++.| +|.|.+|+
T Consensus 202 ~i~~l~~~~~~pvi~-ggi~t~e~a~~~~~~G-ad~i~vg~ 240 (393)
T 2qr6_A 202 NLKEFIGSLDVPVIA-GGVNDYTTALHMMRTG-AVGIIVGG 240 (393)
T ss_dssp CHHHHHHHCSSCEEE-ECCCSHHHHHHHHTTT-CSEEEESC
T ss_pred HHHHHHHhcCCCEEE-CCcCCHHHHHHHHHcC-CCEEEECC
Confidence 356788889999999 566 999999999888 89988876
No 168
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=93.00 E-value=0.16 Score=38.96 Aligned_cols=39 Identities=10% Similarity=0.083 Sum_probs=35.4
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ +++++++++++|.+|+|.+
T Consensus 248 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 287 (393)
T 2og9_A 248 EGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMP 287 (393)
T ss_dssp HHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEee
Confidence 45677899999999999999 9999999999999999987
No 169
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=92.90 E-value=0.23 Score=37.33 Aligned_cols=48 Identities=23% Similarity=0.208 Sum_probs=37.1
Q ss_pred HHHHHHHHcCCeEEEeCCC--CH----HHHHHHHHcCCCcEEecchHHhhCCcHH
Q 046574 13 SLLLMRKAFKGTFLVAGGY--DR----EDGNKAIAEGRADLVVYGRFFLANPDLP 61 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi--~~----~~ae~~l~~g~~DlVa~gR~~lanPdl~ 61 (104)
..+.+.+....||++.||+ +. +.+.++++.| ++.|++||..+..||-.
T Consensus 214 ~~~~vv~~~~vPVv~~GG~~~~~~~~l~~v~~ai~aG-A~Gv~vGRnI~q~~dp~ 267 (295)
T 3glc_A 214 GFERIVAGCPVPIVIAGGKKLPEREALEMCWQAIDQG-ASGVDMGRNIFQSDHPV 267 (295)
T ss_dssp THHHHHHTCSSCEEEECCSCCCHHHHHHHHHHHHHTT-CSEEEESHHHHTSSSHH
T ss_pred HHHHHHHhCCCcEEEEECCCCCHHHHHHHHHHHHHhC-CeEEEeHHHHhcCcCHH
Confidence 3456666667899999999 33 3567778888 79999999999877643
No 170
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=92.57 E-value=0.17 Score=38.37 Aligned_cols=43 Identities=12% Similarity=-0.113 Sum_probs=37.1
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHH
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFF 54 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~ 54 (104)
.....+++.+++||++.+.+ ++++++++++++.+|+|.+-...
T Consensus 232 ~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 275 (371)
T 2ovl_A 232 VGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSN 275 (371)
T ss_dssp HHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTT
T ss_pred HHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccc
Confidence 45667888899999999999 99999999999999999884433
No 171
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=92.41 E-value=0.072 Score=40.09 Aligned_cols=32 Identities=13% Similarity=0.139 Sum_probs=28.7
Q ss_pred CeEEEeCCCCHHHHHHHHHcCCCcEEecchHHh
Q 046574 23 GTFLVAGGYDREDGNKAIAEGRADLVVYGRFFL 55 (104)
Q Consensus 23 ~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~l 55 (104)
.++.++|||+++.+.++++.| +|.|++|....
T Consensus 245 ~~I~ASGGIt~~ni~~~~~aG-aD~i~vGs~i~ 276 (299)
T 2jbm_A 245 VAVEASGGITLDNLPQFCGPH-IDVISMGMLTQ 276 (299)
T ss_dssp SEEEEESSCCTTTHHHHCCTT-CCEEECTHHHH
T ss_pred eeEEEECCCCHHHHHHHHHCC-CCEEEEChhhc
Confidence 689999999999999999888 79999998543
No 172
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=92.33 E-value=0.35 Score=38.47 Aligned_cols=52 Identities=13% Similarity=0.075 Sum_probs=42.2
Q ss_pred HHHHHHHHc--CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhh
Q 046574 13 SLLLMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEF 66 (104)
Q Consensus 13 ~~~~ir~~~--~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~ 66 (104)
....+.+.+ +.++|+-||| |++++..+.+. +|.|.+|-.++..+|....+++
T Consensus 197 ~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~--a~avLVGealmr~~d~~~~~~~ 251 (452)
T 1pii_A 197 RTRELAPKLGHNVTVISESGINTYAQVRELSHF--ANGFLIGSALMAHDDLHAAVRR 251 (452)
T ss_dssp HHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT--CSEEEECHHHHTCSCHHHHHHH
T ss_pred HHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh--CCEEEEcHHHcCCcCHHHHHHH
Confidence 344566666 4589999999 99999999765 8999999999999998766654
No 173
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=92.24 E-value=0.15 Score=38.92 Aligned_cols=43 Identities=16% Similarity=0.010 Sum_probs=37.2
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHH
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFF 54 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~ 54 (104)
.....+++.+++||++.+.+ +++++++++++|.+|+|.+-...
T Consensus 249 ~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 292 (388)
T 2nql_A 249 AGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGH 292 (388)
T ss_dssp HHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHH
T ss_pred HHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCC
Confidence 45667888888999999999 99999999999999999985444
No 174
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=92.23 E-value=0.23 Score=38.02 Aligned_cols=39 Identities=13% Similarity=0.078 Sum_probs=35.4
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ +++.++++++++.+|+|.+
T Consensus 235 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 274 (391)
T 2qgy_A 235 SLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNP 274 (391)
T ss_dssp HHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEE
Confidence 45677899999999999999 9999999999999999988
No 175
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=92.22 E-value=0.33 Score=36.36 Aligned_cols=43 Identities=21% Similarity=0.306 Sum_probs=34.8
Q ss_pred cCCe-EEEeCCCCH----HHHHHHHHcCCCcEEecchHHhhC----CcHHHHH
Q 046574 21 FKGT-FLVAGGYDR----EDGNKAIAEGRADLVVYGRFFLAN----PDLPRRF 64 (104)
Q Consensus 21 ~~~p-vi~~Ggi~~----~~ae~~l~~g~~DlVa~gR~~lan----Pdl~~ri 64 (104)
...| |++.||++. +.+..+++.| ++.|++||..... +|-...+
T Consensus 220 ~~~P~Vv~aGG~~~~~~~~~~~~a~~aG-a~Gv~vGRaI~q~~~~~~dp~~~~ 271 (304)
T 1to3_A 220 INMPWVILSSGVDEKLFPRAVRVAMEAG-ASGFLAGRAVWSSVIGLPDTELML 271 (304)
T ss_dssp CCSCEEECCTTSCTTTHHHHHHHHHHTT-CCEEEESHHHHGGGTTCSCHHHHH
T ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHcC-CeEEEEehHHhCccccCCCHHHHH
Confidence 5779 999999965 5688888887 7999999999988 7654433
No 176
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=92.01 E-value=0.21 Score=35.92 Aligned_cols=52 Identities=21% Similarity=0.300 Sum_probs=35.0
Q ss_pred chHHHHHHHHcCC-eEEEeCCCCHH--HHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 11 PHSLLLMRKAFKG-TFLVAGGYDRE--DGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 11 ~~~~~~ir~~~~~-pvi~~Ggi~~~--~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
++.+..+|+..+. .+|+++||.++ .. ++++.| +|.+.+||+....+|....+
T Consensus 161 ~~e~~~ir~~~~~~~~iv~PGI~~~g~~p-~~~~aG-ad~iVvGr~I~~a~dp~~a~ 215 (228)
T 3m47_A 161 PERLSRLREIIGQDSFLISPGVGAQGGDP-GETLRF-ADAIIVGRSIYLADNPAAAA 215 (228)
T ss_dssp HHHHHHHHHHHCSSSEEEECC----------CGGGT-CSEEEECHHHHTSSCHHHHH
T ss_pred hHHHHHHHHhcCCCCEEEecCcCcCCCCH-hHHHcC-CCEEEECHHHhCCCCHHHHH
Confidence 3456778888864 56788998444 56 777888 69999999999888776544
No 177
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=91.99 E-value=0.23 Score=37.34 Aligned_cols=41 Identities=17% Similarity=0.212 Sum_probs=33.2
Q ss_pred HHHHHHHHcC--CeEEEeCCCCHHHHHHHHHcCCCcEEecchHH
Q 046574 13 SLLLMRKAFK--GTFLVAGGYDREDGNKAIAEGRADLVVYGRFF 54 (104)
Q Consensus 13 ~~~~ir~~~~--~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~ 54 (104)
..+.+++.++ .++.++|||+++.+.++.+.| +|.|++|...
T Consensus 241 ~l~~~v~~~~~~~~I~ASGGIt~~~i~~~a~~G-vD~isvGsli 283 (296)
T 1qap_A 241 QMREAVKRVNGQARLEVSGNVTAETLREFAETG-VDFISVGALT 283 (296)
T ss_dssp HHHHHHHTTCTTCCEEECCCSCHHHHHHHHHTT-CSEEECSHHH
T ss_pred HHHHHHHHhCCCCeEEEECCCCHHHHHHHHHcC-CCEEEEeHHH
Confidence 3344555563 589999999999999999999 7999999844
No 178
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=91.99 E-value=0.2 Score=37.92 Aligned_cols=39 Identities=10% Similarity=0.035 Sum_probs=35.0
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ ++++++++++.+.+|+|.+
T Consensus 229 ~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~i 268 (371)
T 2ps2_A 229 RECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDL 268 (371)
T ss_dssp HHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred HHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEe
Confidence 45667888888999999999 9999999999999999987
No 179
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=91.91 E-value=0.31 Score=35.99 Aligned_cols=51 Identities=16% Similarity=0.133 Sum_probs=38.5
Q ss_pred hHHHHHHHHcCC-eEEEeCCCCHH-----------HHHHHHHcCCCcEEecchHHhhCCcHHHH
Q 046574 12 HSLLLMRKAFKG-TFLVAGGYDRE-----------DGNKAIAEGRADLVVYGRFFLANPDLPRR 63 (104)
Q Consensus 12 ~~~~~ir~~~~~-pvi~~Ggi~~~-----------~ae~~l~~g~~DlVa~gR~~lanPdl~~r 63 (104)
+.+..||+..+. .++++.||.+. .+.++++.| +|++.+||+....+|-...
T Consensus 166 ~e~~~ir~~~~~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aG-ad~iVvGr~I~~a~dp~~a 228 (259)
T 3tfx_A 166 LEVKKLHENIGDDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWG-SSAIVVGRPITLASDPKAA 228 (259)
T ss_dssp GGHHHHHHHHCSSSEEEECCCCCC-----------CHHHHHHTT-CSEEEECHHHHTSSSHHHH
T ss_pred HHHHHHHhhcCCccEEEcCCcCCCCCCcCCccccCCHHHHHHcC-CCEEEEChHHhCCCCHHHH
Confidence 456678888853 57788999322 267888888 7999999999988776543
No 180
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=91.87 E-value=0.43 Score=34.51 Aligned_cols=55 Identities=20% Similarity=0.119 Sum_probs=39.7
Q ss_pred cchHHHHHHHHcC-CeEEEeCCCC-HHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 10 CPHSLLLMRKAFK-GTFLVAGGYD-REDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 10 ~~~~~~~ir~~~~-~pvi~~Ggi~-~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
.++..+.+|+..+ .+++.-||++ .+.++.+.+. .+|.+.+|..++.-+|+...++
T Consensus 163 ~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~-~vDG~LVG~a~l~a~~~~~~i~ 219 (225)
T 1hg3_A 163 ITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIEL-GTVGVLLASGVTKAKDPEKAIW 219 (225)
T ss_dssp HHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHT-TCSEEEESHHHHTCSSHHHHHH
T ss_pred HHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhC-CCCEEEeCHHHHCCcCHHHHHH
Confidence 3345556777654 5788889995 5555555444 5899999999999999877654
No 181
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=91.82 E-value=0.21 Score=40.80 Aligned_cols=44 Identities=25% Similarity=0.378 Sum_probs=36.0
Q ss_pred HHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHH
Q 046574 17 MRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLP 61 (104)
Q Consensus 17 ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~ 61 (104)
.++.+++|||+-||| ..-++-++|..| +|+|.+|..|.-.-+-|
T Consensus 379 ~a~~~~vpvIADGGI~~sGDi~KAlaaG-Ad~VMlGsllAGt~EsP 423 (556)
T 4af0_A 379 FASRFGIPCIADGGIGNIGHIAKALALG-ASAVMMGGLLAGTTESP 423 (556)
T ss_dssp HHGGGTCCEEEESCCCSHHHHHHHHHTT-CSEEEESTTTTTBTTSS
T ss_pred HHHHcCCCEEecCCcCcchHHHHHhhcC-CCEEEEchhhccccCCC
Confidence 445567899999999 888888999999 79999999887555443
No 182
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=91.71 E-value=0.31 Score=36.96 Aligned_cols=39 Identities=10% Similarity=0.045 Sum_probs=35.3
Q ss_pred hHHHHHHHHcCCeEEEeCCC-C-HHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-D-REDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~-~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ + +++++++++++.+|+|.+
T Consensus 241 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~i 281 (382)
T 1rvk_A 241 SSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILRT 281 (382)
T ss_dssp HHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEee
Confidence 45667889899999999999 9 999999999999999987
No 183
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=91.20 E-value=0.34 Score=35.08 Aligned_cols=51 Identities=25% Similarity=0.300 Sum_probs=40.3
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhh
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEF 66 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~ 66 (104)
+..+.+++.++..+|.+|.+ |+++++.+++.| ++||.- |- .||++++..+.
T Consensus 53 ~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AG-A~fivs--P~-~~~evi~~~~~ 104 (217)
T 3lab_A 53 AAISAIKKAVPEAIVGAGTVCTADDFQKAIDAG-AQFIVS--PG-LTPELIEKAKQ 104 (217)
T ss_dssp HHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHT-CSEEEE--SS-CCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCeEeeccccCHHHHHHHHHcC-CCEEEe--CC-CcHHHHHHHHH
Confidence 46677888888899999999 999999999999 688754 21 57788766544
No 184
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=91.18 E-value=0.56 Score=33.94 Aligned_cols=54 Identities=13% Similarity=0.143 Sum_probs=38.9
Q ss_pred chHHHHHHHHcC-CeEEEeCCCC-HHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 11 PHSLLLMRKAFK-GTFLVAGGYD-REDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 11 ~~~~~~ir~~~~-~pvi~~Ggi~-~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
+++.+.+|+..+ .+++.-||++ .+.++.+.+. .+|.+.+|..++.-+|+...++
T Consensus 161 ~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~-giDG~LVG~a~l~a~~~~~~i~ 216 (226)
T 1w0m_A 161 VETVGLVSRHFPEVSVITGAGIESGDDVAAALRL-GTRGVLLASAAVKAKDPYAKIV 216 (226)
T ss_dssp HHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHT-TCSEEEECHHHHTCSSHHHHHH
T ss_pred HHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhC-CCCEEEECHHHHCCcCHHHHHH
Confidence 344455776554 5788889994 5555555544 4899999999999999876654
No 185
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=91.03 E-value=0.39 Score=34.93 Aligned_cols=55 Identities=25% Similarity=0.298 Sum_probs=43.0
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhh-CCCC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEF-NAPL 70 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~-g~~l 70 (104)
+..+.+++.+...++..|.+ +.++++.+++.| +|+|...- .||++++..+. |.++
T Consensus 74 e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AG-A~fIvsP~---~~~~vi~~~~~~gi~~ 130 (232)
T 4e38_A 74 EAIRLLRQAQPEMLIGAGTILNGEQALAAKEAG-ATFVVSPG---FNPNTVRACQEIGIDI 130 (232)
T ss_dssp HHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHT-CSEEECSS---CCHHHHHHHHHHTCEE
T ss_pred HHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcC-CCEEEeCC---CCHHHHHHHHHcCCCE
Confidence 46667888887788999999 999999999999 79998653 57887766544 5554
No 186
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=90.96 E-value=0.34 Score=36.55 Aligned_cols=41 Identities=15% Similarity=0.148 Sum_probs=35.9
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecch
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGR 52 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR 52 (104)
.....+++.+++||++.+.+ ++++++++++.+.+|+|.+-.
T Consensus 227 ~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~ 268 (369)
T 2p8b_A 227 DAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNIKL 268 (369)
T ss_dssp HHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred HHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeec
Confidence 35667888889999999999 999999999999999998843
No 187
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=90.87 E-value=0.31 Score=36.97 Aligned_cols=43 Identities=9% Similarity=0.010 Sum_probs=36.6
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHH
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFF 54 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~ 54 (104)
+....+++.+++||++.+.+ ++++++++++++.+|+|.+-...
T Consensus 227 ~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 270 (378)
T 2qdd_A 227 DQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNR 270 (378)
T ss_dssp HHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred HHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccc
Confidence 45567888888999999999 99999999999999999884433
No 188
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=90.67 E-value=0.47 Score=35.77 Aligned_cols=39 Identities=8% Similarity=-0.008 Sum_probs=35.2
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ ++++++++++.+.+|+|.+
T Consensus 229 ~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 268 (370)
T 1nu5_A 229 GALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSL 268 (370)
T ss_dssp HHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEE
Confidence 45667888899999999999 9999999999999999988
No 189
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=90.67 E-value=0.34 Score=37.13 Aligned_cols=39 Identities=3% Similarity=-0.070 Sum_probs=35.2
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++.+++||++.+.+ ++++++++++++.+|+|.+
T Consensus 259 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 298 (410)
T 2gl5_A 259 DNMQKVSRSTTIPIATGERSYTRWGYRELLEKQSIAVAQP 298 (410)
T ss_dssp HHHHHHHHHCSSCEEECTTCCTTHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 45677899999999999999 9999999999999999877
No 190
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=90.63 E-value=0.42 Score=36.67 Aligned_cols=39 Identities=10% Similarity=0.057 Sum_probs=35.2
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++.+++||++.+.+ ++++++++++.|.+|+|.+
T Consensus 261 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 300 (398)
T 2pp0_A 261 EGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQP 300 (398)
T ss_dssp HHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 45667899999999999999 9999999999999999887
No 191
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=90.50 E-value=0.26 Score=37.13 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=30.9
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+..+.+++.++++++..|++ +++.|+.+++.| +|.|.+
T Consensus 138 ~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aG-ad~Ivv 176 (336)
T 1ypf_A 138 NMIQHIKKHLPESFVIAGNVGTPEAVRELENAG-ADATKV 176 (336)
T ss_dssp HHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHT-CSEEEE
T ss_pred HHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcC-CCEEEE
Confidence 35677888887666666756 999999999999 799888
No 192
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=90.47 E-value=0.44 Score=36.41 Aligned_cols=39 Identities=13% Similarity=0.198 Sum_probs=31.0
Q ss_pred HHHHHHHc--CCeEEEeCCCCHHHHHHHHHcCCCcEEecchH
Q 046574 14 LLLMRKAF--KGTFLVAGGYDREDGNKAIAEGRADLVVYGRF 53 (104)
Q Consensus 14 ~~~ir~~~--~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~ 53 (104)
++.+.+.+ ..++.++|||+++.+.+..+.| +|+|++|..
T Consensus 265 l~~av~~l~~~v~ieaSGGIt~~~I~~~a~tG-VD~isvGal 305 (320)
T 3paj_A 265 MREAVKINAGRAALENSGNITLDNLKECAETG-VDYISVGAL 305 (320)
T ss_dssp HHHHHHHHTTSSEEEEESSCCHHHHHHHHTTT-CSEEECTHH
T ss_pred HHHHHHHhCCCCeEEEECCCCHHHHHHHHHcC-CCEEEECce
Confidence 33444444 3589999999999999999888 799999973
No 193
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=90.24 E-value=0.37 Score=36.89 Aligned_cols=39 Identities=5% Similarity=-0.054 Sum_probs=35.1
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++.+++||++.+.+ ++++++++++++.+|+|.+
T Consensus 256 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 295 (407)
T 2o56_A 256 AQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSLSVIQP 295 (407)
T ss_dssp HHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEec
Confidence 45677899999999999999 9999999999999999877
No 194
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=90.01 E-value=0.39 Score=36.77 Aligned_cols=43 Identities=5% Similarity=-0.086 Sum_probs=36.5
Q ss_pred hHHHHHHH-HcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHH
Q 046574 12 HSLLLMRK-AFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFF 54 (104)
Q Consensus 12 ~~~~~ir~-~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~ 54 (104)
.....+++ .+++||++.+.+ +++.++++++++.+|+|.+-...
T Consensus 236 ~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 280 (401)
T 2hzg_A 236 AAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGR 280 (401)
T ss_dssp HHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHH
T ss_pred HHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcch
Confidence 45567888 788999999999 99999999999999999884333
No 195
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=89.95 E-value=0.39 Score=36.71 Aligned_cols=39 Identities=15% Similarity=0.142 Sum_probs=34.8
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ +++++++++++|.+|+|.+
T Consensus 230 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 269 (397)
T 2qde_A 230 DGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLMI 269 (397)
T ss_dssp HHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred HHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEE
Confidence 45667888888999999999 9999999999999999887
No 196
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=89.91 E-value=0.42 Score=36.39 Aligned_cols=39 Identities=5% Similarity=0.037 Sum_probs=34.9
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ ++++++++++.+.+|+|.+
T Consensus 226 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 265 (382)
T 2gdq_A 226 QDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQP 265 (382)
T ss_dssp HHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 45667888888999999999 9999999999999999887
No 197
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=89.89 E-value=0.35 Score=36.86 Aligned_cols=39 Identities=10% Similarity=0.007 Sum_probs=35.0
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++.+++||++.+.+ +++.++++++++.+|+|.+
T Consensus 240 ~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 279 (392)
T 2poz_A 240 GALKVISEQIPLPIAVGERVYTRFGFRKIFELQACGIIQP 279 (392)
T ss_dssp HHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCSEECC
T ss_pred HHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 45677889999999999999 9999999999999999877
No 198
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=89.88 E-value=0.094 Score=39.35 Aligned_cols=32 Identities=9% Similarity=0.166 Sum_probs=23.0
Q ss_pred CeEEEeCCCCHHHHHHHHHcCCCcEEecchHHh
Q 046574 23 GTFLVAGGYDREDGNKAIAEGRADLVVYGRFFL 55 (104)
Q Consensus 23 ~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~l 55 (104)
.++.++|||+++.+.+.++.| +|.|++|....
T Consensus 250 v~I~ASGGIt~~ni~~~~~~G-vD~i~vGs~i~ 281 (294)
T 3c2e_A 250 FLLECSGGLNLDNLEEYLCDD-IDIYSTSSIHQ 281 (294)
T ss_dssp CEEEEECCCCC------CCCS-CSEEECGGGTS
T ss_pred eEEEEECCCCHHHHHHHHHcC-CCEEEEechhc
Confidence 689999999999999999888 79999998743
No 199
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=89.73 E-value=0.39 Score=36.68 Aligned_cols=39 Identities=10% Similarity=-0.034 Sum_probs=35.1
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++.+++||++.+.+ +++.++++++.+.+|+|.+
T Consensus 250 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 289 (403)
T 2ox4_A 250 RLLKEAKKKIDIPLASGERIYSRWGFLPFLEDRSIDVIQP 289 (403)
T ss_dssp HHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 45677899899999999999 9999999999999999887
No 200
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=89.60 E-value=0.31 Score=37.40 Aligned_cols=39 Identities=10% Similarity=-0.028 Sum_probs=35.1
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ ++++++++++.|.+|+|.+
T Consensus 242 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~ 281 (394)
T 3mqt_A 242 IGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKTGISVVQS 281 (394)
T ss_dssp HHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHHCCSEECC
T ss_pred HHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCeEec
Confidence 45677999999999999999 8999999999999999887
No 201
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=89.52 E-value=0.49 Score=36.44 Aligned_cols=38 Identities=16% Similarity=0.112 Sum_probs=31.0
Q ss_pred hHHHHHHHHcCCeEEEe---CCCCHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVA---GGYDREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~---Ggi~~~~ae~~l~~g~~DlVa~ 50 (104)
+..+.+++.+++|||+= +|++++.|+.+++.| +|.|.+
T Consensus 177 ~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aG-ad~I~V 217 (368)
T 3vkj_A 177 EKLRDISKELSVPIIVKESGNGISMETAKLLYSYG-IKNFDT 217 (368)
T ss_dssp HHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTT-CCEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCC-CCEEEE
Confidence 35667888888999993 446999999999999 798877
No 202
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=89.48 E-value=0.75 Score=34.33 Aligned_cols=57 Identities=11% Similarity=-0.047 Sum_probs=46.6
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec--chHHhhCCcHHHHHhhCC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY--GRFFLANPDLPRRFEFNA 68 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~--gR~~lanPdl~~ri~~g~ 68 (104)
.....+++.+++||++.+.+ ++++++++++.|.+|+|.+ +|+-|.+.--+.++.+..
T Consensus 225 ~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~GGit~~~~i~~~A~~~ 284 (345)
T 2zad_A 225 EGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNIKLMKSGISDALAIVEIAESS 284 (345)
T ss_dssp HHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEEecccccHHHHHHHHHHHHHc
Confidence 45667888899999999999 9999999999999999999 777777765555555533
No 203
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=89.36 E-value=0.38 Score=37.01 Aligned_cols=39 Identities=13% Similarity=0.090 Sum_probs=35.1
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ ++++++++++.|.+|+|.+
T Consensus 247 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~ 286 (394)
T 3mkc_A 247 SGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKVHLLQS 286 (394)
T ss_dssp HHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCeEec
Confidence 45677999999999999999 8999999999999999887
No 204
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=89.33 E-value=0.59 Score=36.50 Aligned_cols=39 Identities=10% Similarity=0.131 Sum_probs=35.2
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ ++.+++++++.|.+|+|.+
T Consensus 244 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~ 283 (433)
T 3rcy_A 244 GAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQP 283 (433)
T ss_dssp HHHHHHHHHSSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHhccCCCEEecCCCCCHHHHHHHHHcCCCCEEEe
Confidence 45677999999999999999 9999999999999999877
No 205
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=89.30 E-value=0.53 Score=35.46 Aligned_cols=39 Identities=10% Similarity=0.109 Sum_probs=34.7
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ ++++++++++.|.+|+|.+
T Consensus 223 ~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 262 (368)
T 1sjd_A 223 LGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNI 262 (368)
T ss_dssp HHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEe
Confidence 45567888888999999999 9999999999999999887
No 206
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=89.27 E-value=1.8 Score=31.42 Aligned_cols=51 Identities=22% Similarity=0.073 Sum_probs=42.0
Q ss_pred chHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 11 PHSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 11 ~~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
...++.+++.++.||+.-+.| ++.+...+...| +|.|.++-..+. +...++
T Consensus 95 ~~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~G-AD~VlL~~~~l~--~~l~~l 146 (254)
T 1vc4_A 95 LLDLKRVREAVDLPLLRKDFVVDPFMLEEARAFG-ASAALLIVALLG--ELTGAY 146 (254)
T ss_dssp HHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTT-CSEEEEEHHHHG--GGHHHH
T ss_pred HHHHHHHHHhcCCCEEECCcCCCHHHHHHHHHcC-CCEEEECccchH--HHHHHH
Confidence 356778999999999988888 888999999888 899999998887 455544
No 207
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=89.10 E-value=0.56 Score=35.73 Aligned_cols=39 Identities=26% Similarity=0.308 Sum_probs=30.4
Q ss_pred hHHHHHHHHc-CCeEEEeCCCCHHHHHHHHHcCCCcEEecc
Q 046574 12 HSLLLMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~g 51 (104)
+..+.+|+.+ ++||++.+..++++|+.+++.| +|+|.++
T Consensus 150 ~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aG-aD~I~v~ 189 (351)
T 2c6q_A 150 EFVKDVRKRFPQHTIMAGNVVTGEMVEELILSG-ADIIKVG 189 (351)
T ss_dssp HHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhC-CCEEEEC
Confidence 3567788888 6788864444999999999999 7998553
No 208
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=89.09 E-value=0.48 Score=36.59 Aligned_cols=39 Identities=8% Similarity=0.047 Sum_probs=34.6
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ ++++++++++.|.+|+|.+
T Consensus 252 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 291 (409)
T 3go2_A 252 QGLAYVRNHSPHPISSCETLFGIREFKPFFDANAVDVAIV 291 (409)
T ss_dssp HHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEe
Confidence 45677899999999999999 8999999999999999765
No 209
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=88.95 E-value=0.84 Score=33.12 Aligned_cols=50 Identities=32% Similarity=0.434 Sum_probs=36.1
Q ss_pred HHHHHHHHcC-CeEEEeCCCCHHH-----------HHHHHHcCCCcEEecchHHhhCCcHHHH
Q 046574 13 SLLLMRKAFK-GTFLVAGGYDRED-----------GNKAIAEGRADLVVYGRFFLANPDLPRR 63 (104)
Q Consensus 13 ~~~~ir~~~~-~pvi~~Ggi~~~~-----------ae~~l~~g~~DlVa~gR~~lanPdl~~r 63 (104)
.+..||+..+ ..++.+.||.++. ..++++.| +|++.+||+....+|-...
T Consensus 167 e~~~ir~~~~~~fl~vtPGIr~~g~~~~dQ~rv~t~~~~~~aG-ad~lVvGr~I~~a~dp~~a 228 (239)
T 3tr2_A 167 EAALLRKQFDRNFLLVTPGIRLETDEKGDQKRVMTPRAAIQAG-SDYLVIGRPITQSTDPLKA 228 (239)
T ss_dssp HHHHHHTTCCTTSEEEECCBC----------CCBCHHHHHHHT-CSEEEECHHHHTSSSHHHH
T ss_pred hHHHHHHhcCCCcEEECCCcCCCCCCcCcccccCCHHHHHHcC-CCEEEEChHHhCCCCHHHH
Confidence 4456888775 3678889994332 56788888 7999999999987776543
No 210
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=88.95 E-value=0.69 Score=35.76 Aligned_cols=39 Identities=8% Similarity=0.123 Sum_probs=35.1
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++++++++++.|.+|+|.+
T Consensus 255 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~ 294 (410)
T 3dip_A 255 PAVADLRRQTRAPICGGENLAGTRRFHEMLCADAIDFVML 294 (410)
T ss_dssp HHHHHHHHHHCCCEEECTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCeEee
Confidence 45677999999999999999 9999999999999999877
No 211
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=88.90 E-value=0.5 Score=36.57 Aligned_cols=39 Identities=8% Similarity=0.048 Sum_probs=35.0
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ ++++++++++.|.+|+|.+
T Consensus 219 ~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~ 258 (405)
T 3rr1_A 219 ETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSILQP 258 (405)
T ss_dssp HHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSEECC
T ss_pred HHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCeEEE
Confidence 45677889889999999999 9999999999999999887
No 212
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=88.87 E-value=0.19 Score=46.53 Aligned_cols=56 Identities=13% Similarity=0.214 Sum_probs=44.2
Q ss_pred HHHHHHHcCCeEEEeCCC-CHHHHHHHH-----------HcCCCcEEecchHHhh------CCcHHHHHhhCCCC
Q 046574 14 LLLMRKAFKGTFLVAGGY-DREDGNKAI-----------AEGRADLVVYGRFFLA------NPDLPRRFEFNAPL 70 (104)
Q Consensus 14 ~~~ir~~~~~pvi~~Ggi-~~~~ae~~l-----------~~g~~DlVa~gR~~la------nPdl~~ri~~g~~l 70 (104)
...+++.+++|||++||| +.+.+..+| .-| +|.|.||..|++ .|.+-+.+......
T Consensus 754 ~~~v~~~~~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lg-adGv~~GTrf~~t~Ea~~~~~~K~~iv~a~~~ 827 (2051)
T 2uv8_G 754 YSKIRRHPNIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMP-FDGFLFGSRVMIAKEVKTSPDAKKCIAACTGV 827 (2051)
T ss_dssp HHHHTTCTTBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCC-CSCEECSGGGTTSTTSCCCHHHHHHHHTCCCC
T ss_pred HHHHHhcCCceEEEeCCCCCHHHHHHHHccccccccCccCCC-CceeeechHHHhCcccccCHHHHHHHHhCCCC
Confidence 466788888999999999 999999999 445 799999999986 45555666664444
No 213
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=88.81 E-value=0.55 Score=36.11 Aligned_cols=39 Identities=18% Similarity=0.150 Sum_probs=35.0
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++++++++++.|.+|+|.+
T Consensus 242 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 281 (401)
T 3sbf_A 242 EWLDNIRSQSSVSLGLGELFNNPEEWKSLIANRRIDFIRC 281 (401)
T ss_dssp GGHHHHHTTCCCCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHhhCCCCEEeCCccCCHHHHHHHHhcCCCCEEec
Confidence 35667999999999999999 9999999999999999877
No 214
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=88.62 E-value=0.76 Score=34.64 Aligned_cols=40 Identities=15% Similarity=0.277 Sum_probs=35.4
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecc
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~g 51 (104)
.....+++.+++||++.+.+ ++++++++++.+.+|+|.+-
T Consensus 224 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 264 (354)
T 3jva_A 224 EGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIK 264 (354)
T ss_dssp HHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred HHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEEC
Confidence 35667899999999999999 99999999999999998873
No 215
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=88.59 E-value=0.59 Score=35.84 Aligned_cols=39 Identities=18% Similarity=0.151 Sum_probs=34.9
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++.+++||++.+.+ ++++++++++.+.+|+|.+
T Consensus 251 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 290 (410)
T 2qq6_A 251 DALAEVRRSTSTPICAGENVYTRFDFRELFAKRAVDYVMP 290 (410)
T ss_dssp HHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEec
Confidence 45667888888999999999 9999999999999999987
No 216
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=88.48 E-value=0.68 Score=35.92 Aligned_cols=39 Identities=5% Similarity=-0.109 Sum_probs=35.2
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++.+++++++.|.+|+|.+
T Consensus 271 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~v~i 310 (412)
T 3stp_A 271 AGYAELNAMNIVPISGGEHEFSVIGCAELINRKAVSVLQY 310 (412)
T ss_dssp HHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEec
Confidence 45677999899999999999 9999999999999999887
No 217
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=88.36 E-value=0.12 Score=38.71 Aligned_cols=33 Identities=24% Similarity=0.232 Sum_probs=28.8
Q ss_pred CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHh
Q 046574 22 KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFL 55 (104)
Q Consensus 22 ~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~l 55 (104)
..++.++|||+++.+.+..+.| +|+|++|...-
T Consensus 240 ~v~ieASGGIt~eni~~~a~tG-VD~IsvGslt~ 272 (285)
T 1o4u_A 240 NVIVEVSGGITEENVSLYDFET-VDVISSSRLTL 272 (285)
T ss_dssp TSEEEEEECCCTTTGGGGCCTT-CCEEEEGGGTS
T ss_pred CceEEEECCCCHHHHHHHHHcC-CCEEEEeHHHc
Confidence 4699999999999999998888 89999998443
No 218
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=88.33 E-value=0.14 Score=48.90 Aligned_cols=54 Identities=17% Similarity=0.114 Sum_probs=43.5
Q ss_pred HHHHHHcCCeEEEeCCC-CHHHHHHHH-----------HcCCCcEEecchHHhhCC------cHHHHHhhCCC
Q 046574 15 LLMRKAFKGTFLVAGGY-DREDGNKAI-----------AEGRADLVVYGRFFLANP------DLPRRFEFNAP 69 (104)
Q Consensus 15 ~~ir~~~~~pvi~~Ggi-~~~~ae~~l-----------~~g~~DlVa~gR~~lanP------dl~~ri~~g~~ 69 (104)
..+++..++|||+.||| +++.+..++ .-| +|.|.+|..|++.+ .+.+.+.+-..
T Consensus 599 ~~ir~~~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lG-AdGV~vGTrfl~t~Ea~~s~~~K~~l~~a~~ 670 (3089)
T 3zen_D 599 SELRSRSNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMP-IDGILVGTAAMATLEATTSPQVKQLLVETKG 670 (3089)
T ss_dssp HHHTTCTTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCC-CSEEECSSTTTTCTTSCBCHHHHHHHHHCCC
T ss_pred HHHhhcCCCeEEEEeCCCCHHHHHHHhccccccccCccCCC-CCEEEecHHHHhCcccCCCHHHHHHHHhCCC
Confidence 55677778899999999 999999999 667 89999999999765 45566655444
No 219
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=88.31 E-value=0.54 Score=36.22 Aligned_cols=39 Identities=5% Similarity=0.071 Sum_probs=35.0
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ ++++++++++.|.+|+|.+
T Consensus 249 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~ 288 (404)
T 4e5t_A 249 EDMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQM 288 (404)
T ss_dssp HHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECC
T ss_pred HHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEec
Confidence 45677999999999999999 8999999999999999877
No 220
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=88.07 E-value=0.87 Score=34.71 Aligned_cols=47 Identities=11% Similarity=0.090 Sum_probs=38.3
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANP 58 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanP 58 (104)
.....+++.+++||++.+.+ ++++++++++.+.+|+|.+-...+--+
T Consensus 227 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~GGi 274 (378)
T 3eez_A 227 DDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGL 274 (378)
T ss_dssp HHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSH
T ss_pred HHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhcCCH
Confidence 34567888889999999999 999999999999999998855544333
No 221
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=88.07 E-value=0.81 Score=34.64 Aligned_cols=39 Identities=13% Similarity=0.123 Sum_probs=34.9
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ ++++++++++.|.+|+|.+
T Consensus 226 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 265 (367)
T 3dg3_A 226 LSRRRLVGQLDMPFIADESVPTPADVTREVLGGSATAISI 265 (367)
T ss_dssp HHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSEEEE
T ss_pred HHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 35667899999999999999 9999999999999999877
No 222
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=88.04 E-value=0.51 Score=36.16 Aligned_cols=39 Identities=13% Similarity=0.108 Sum_probs=34.6
Q ss_pred hHHHHHH-HHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMR-KAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir-~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....++ +.+++||++.+.+ ++++++++++.+.+|+|.+
T Consensus 236 ~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~i 276 (389)
T 3ozy_A 236 EGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQA 276 (389)
T ss_dssp HHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEe
Confidence 3556788 8888999999999 8999999999999999887
No 223
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=87.99 E-value=0.83 Score=34.84 Aligned_cols=39 Identities=8% Similarity=0.135 Sum_probs=34.9
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ ++++++++++.|.+|+|.+
T Consensus 235 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 274 (383)
T 3i4k_A 235 ETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVIAL 274 (383)
T ss_dssp HHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEE
T ss_pred HHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEE
Confidence 35667899899999999999 9999999999999999887
No 224
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=87.92 E-value=0.48 Score=35.66 Aligned_cols=32 Identities=25% Similarity=0.327 Sum_probs=27.9
Q ss_pred CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHH
Q 046574 22 KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFF 54 (104)
Q Consensus 22 ~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~ 54 (104)
..++.++|||+++.+.+..+.| +|+|++|...
T Consensus 242 ~v~ieaSGGIt~~~i~~~a~tG-VD~IsvGalt 273 (287)
T 3tqv_A 242 KVALEVSGNIDRNSIVAIAKTG-VDFISVGAIT 273 (287)
T ss_dssp TCEEEEESSCCTTTHHHHHTTT-CSEEECSHHH
T ss_pred CceEEEECCCCHHHHHHHHHcC-CCEEEEChhh
Confidence 3589999999999999998888 8999999654
No 225
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=87.83 E-value=1.1 Score=34.21 Aligned_cols=40 Identities=15% Similarity=0.069 Sum_probs=35.8
Q ss_pred hHHHHHHHHc-CCeEEEeCCCCHHHHHHHHHcCCCcEEecc
Q 046574 12 HSLLLMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~g 51 (104)
.....+++.+ ++||++.+.+++++++++++.|.+|+|.+.
T Consensus 233 ~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 233 DGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp HHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCCCEEEEC
Confidence 4567799998 899999988899999999999999999986
No 226
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=87.78 E-value=0.9 Score=34.14 Aligned_cols=40 Identities=13% Similarity=0.116 Sum_probs=35.4
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecc
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~g 51 (104)
.....+++.+++||++.+.+ ++++++++++.+.+|+|.+-
T Consensus 228 ~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik 268 (366)
T 1tkk_A 228 AGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINIK 268 (366)
T ss_dssp HHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred HHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCEEEee
Confidence 45567888889999999999 99999999999999999883
No 227
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=87.70 E-value=0.43 Score=37.16 Aligned_cols=39 Identities=18% Similarity=0.164 Sum_probs=35.3
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ ++++++++++.|.+|+|.+
T Consensus 268 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~ 307 (425)
T 3vcn_A 268 AGFRLIRQHTTTPLAVGEIFAHVWDAKQLIEEQLIDYLRA 307 (425)
T ss_dssp THHHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred HHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCeEec
Confidence 35678999999999999999 9999999999999999887
No 228
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=87.35 E-value=0.46 Score=36.95 Aligned_cols=39 Identities=18% Similarity=0.204 Sum_probs=35.2
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ ++++++++++.|.+|+|.+
T Consensus 267 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~ 306 (424)
T 3v3w_A 267 ESFKLIRQHTTTPLAVGEVFNSIHDCRELIQNQWIDYIRT 306 (424)
T ss_dssp THHHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred HHHHHHHhhCCCCEEEccCcCCHHHHHHHHHcCCCCeEee
Confidence 35678999999999999999 9999999999999999887
No 229
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=87.18 E-value=0.57 Score=35.65 Aligned_cols=39 Identities=15% Similarity=0.091 Sum_probs=34.8
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ ++++++++++.|.+|+|.+
T Consensus 235 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~ 274 (374)
T 3sjn_A 235 ISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQP 274 (374)
T ss_dssp HHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEECC
T ss_pred HHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 45677999999999999999 8999999999999999876
No 230
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=87.14 E-value=0.78 Score=35.27 Aligned_cols=39 Identities=15% Similarity=0.086 Sum_probs=35.0
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++++++++++.|.+|+|.+
T Consensus 251 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~ 290 (400)
T 4dxk_A 251 SSLTRYAAVSPAPISASETLGSRWAFRDLLETGAAGVVML 290 (400)
T ss_dssp GGHHHHHHHCSSCEEECTTCCHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 45678999999999999999 8999999999999999877
No 231
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=86.99 E-value=0.41 Score=37.10 Aligned_cols=39 Identities=15% Similarity=0.129 Sum_probs=35.0
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.+.+ ++++++++++.|.+|+|.+
T Consensus 261 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~ 300 (418)
T 3r4e_A 261 EAFRLVRQHTVTPLAVGEIFNTIWDAKDLIQNQLIDYIRA 300 (418)
T ss_dssp GGGHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred HHHHHHHhcCCCCEEEcCCcCCHHHHHHHHHcCCCCeEec
Confidence 34567999999999999999 9999999999999999887
No 232
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=86.98 E-value=0.53 Score=36.55 Aligned_cols=39 Identities=10% Similarity=-0.038 Sum_probs=34.6
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++.++ +||++.+.+ +++++++++++|.+|+|.+
T Consensus 270 ~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 310 (428)
T 3bjs_A 270 ASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQP 310 (428)
T ss_dssp HHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEe
Confidence 45567888888 999999999 9999999999999999877
No 233
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=86.90 E-value=0.74 Score=35.65 Aligned_cols=39 Identities=10% Similarity=0.103 Sum_probs=34.9
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++++++++++.|.+|+|.+
T Consensus 242 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~ 281 (412)
T 4e4u_A 242 EAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGGASILQL 281 (412)
T ss_dssp HHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEe
Confidence 45677899999999999999 8999999999999999877
No 234
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=86.89 E-value=1.1 Score=32.89 Aligned_cols=52 Identities=23% Similarity=0.287 Sum_probs=38.3
Q ss_pred hHHHHHHHHcCC-eEEEeCCCCHH--H---------HHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 12 HSLLLMRKAFKG-TFLVAGGYDRE--D---------GNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 12 ~~~~~ir~~~~~-pvi~~Ggi~~~--~---------ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
+.+..||+..+. .++++.||.++ . ..++++.| +|++.+||+....+|-...+
T Consensus 184 ~e~~~iR~~~g~~fl~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aG-ad~iVvGr~I~~a~dp~~a~ 247 (255)
T 3ldv_A 184 QEASLLKQHLGREFKLVTPGIRPAGSEQGDQRRIMTPAQAIASG-SDYLVIGRPITQAAHPEVVL 247 (255)
T ss_dssp HHHHHHHHHHCTTSEEEEECCCCTTSTTSSCSSSCCHHHHHHTT-CSEEEECHHHHTCSCHHHHH
T ss_pred HHHHHHHHhcCCCcEEEeCCcccCcCCccceeccCCHHHHHHcC-CCEEEECHHHhCCCCHHHHH
Confidence 346678888763 67778888322 2 56788888 79999999999988765544
No 235
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=86.84 E-value=0.38 Score=35.93 Aligned_cols=33 Identities=15% Similarity=0.224 Sum_probs=28.9
Q ss_pred CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHh
Q 046574 22 KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFL 55 (104)
Q Consensus 22 ~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~l 55 (104)
..++.++|||+++.+.+..+.| +|+|++|...-
T Consensus 241 ~v~ieaSGGIt~~~i~~~a~tG-VD~isvG~l~~ 273 (284)
T 1qpo_A 241 TVMLESSGGLSLQTAATYAETG-VDYLAVGALTH 273 (284)
T ss_dssp TCEEEEESSCCTTTHHHHHHTT-CSEEECGGGTS
T ss_pred CeEEEEECCCCHHHHHHHHhcC-CCEEEECHHHc
Confidence 3589999999999999999988 89999998443
No 236
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=86.83 E-value=0.96 Score=33.10 Aligned_cols=41 Identities=24% Similarity=0.270 Sum_probs=32.8
Q ss_pred hHHHHHHHHcC--CeEEEeCCC-CHHHHHHHHHcCCCcEEecchH
Q 046574 12 HSLLLMRKAFK--GTFLVAGGY-DREDGNKAIAEGRADLVVYGRF 53 (104)
Q Consensus 12 ~~~~~ir~~~~--~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~ 53 (104)
+..+.+|+.++ ++|-++||| +.++|.+.++.| ++-|+...+
T Consensus 188 ~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~aG-A~riGtS~~ 231 (239)
T 3ngj_A 188 EDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINNG-ASRIGASAG 231 (239)
T ss_dssp HHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHHTT-EEEEEESCH
T ss_pred HHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHHhc-ccceecccH
Confidence 35566887775 489999999 999999999999 787766543
No 237
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=86.77 E-value=0.86 Score=33.41 Aligned_cols=42 Identities=14% Similarity=0.153 Sum_probs=37.2
Q ss_pred CeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 23 GTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 23 ~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
++++..|+++++.+.+++....+|-+.+|+.-|. .+|..-+.
T Consensus 200 vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~-~~F~~Ii~ 241 (244)
T 2v5b_A 200 LRILYGGSVTAKNARTLYQMRDINGFLVGGASLK-PEFVEIIE 241 (244)
T ss_dssp CEEEECSCCCHHHHHHHHTSTTCCEEEESGGGSS-TTHHHHHH
T ss_pred ccEEEcCCCCHhHHHHHhcCCCCCeeeechHHHH-HHHHHHHH
Confidence 5788888889999999999999999999999999 88976654
No 238
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=86.58 E-value=1.2 Score=33.88 Aligned_cols=39 Identities=10% Similarity=-0.026 Sum_probs=34.8
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++++++++++.|.+|+|.+
T Consensus 238 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 277 (372)
T 3tj4_A 238 TSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQP 277 (372)
T ss_dssp HHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEEe
Confidence 45567899999999999999 9999999999999999877
No 239
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=86.49 E-value=1.1 Score=32.92 Aligned_cols=49 Identities=20% Similarity=0.072 Sum_probs=39.5
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHH
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLP 61 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~ 61 (104)
+.++.+|+.++.||+.-+.+ ++.+.+++...| +|.|.++-..+.+.++.
T Consensus 103 ~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~G-AD~VlLi~a~l~~~~l~ 152 (272)
T 3qja_A 103 DDLDAVRASVSIPVLRKDFVVQPYQIHEARAHG-ADMLLLIVAALEQSVLV 152 (272)
T ss_dssp HHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-CSEEEEEGGGSCHHHHH
T ss_pred HHHHHHHHhCCCCEEECccccCHHHHHHHHHcC-CCEEEEecccCCHHHHH
Confidence 35667888899999988777 999999999888 79999987777655554
No 240
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=86.33 E-value=0.67 Score=34.61 Aligned_cols=56 Identities=16% Similarity=0.239 Sum_probs=43.7
Q ss_pred CcchHHHHHHHHc----------CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 9 ECPHSLLLMRKAF----------KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 9 ~~~~~~~~ir~~~----------~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
+.++.-..||+.+ +++++..|+++++.+.+++..-.+|-+.+|+.-|. |+|..-+.
T Consensus 203 ~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~~N~~el~~~~diDG~LVGgASL~-~~F~~Ii~ 268 (271)
T 3krs_A 203 QAQEAHAFIREYVTRMYNPQVSSNLRIIYGGSVTPDNCNELIKCADIDGFLVGGASLK-PTFAKIIE 268 (271)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHCCEEECSCCCTTTHHHHHHSTTCCEEEESGGGGS-TTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcChhhcCCccEEEcCCcCHHHHHHHhcCCCCCEEEeeHHhhh-HHHHHHHH
Confidence 3344445566652 25788888889999999999988999999999998 89987654
No 241
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=85.91 E-value=1.7 Score=32.73 Aligned_cols=40 Identities=23% Similarity=0.221 Sum_probs=31.3
Q ss_pred HHHHHHHHc-----CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchH
Q 046574 13 SLLLMRKAF-----KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRF 53 (104)
Q Consensus 13 ~~~~ir~~~-----~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~ 53 (104)
..+.+++.+ +++|.++||| +.++|.+.|+.| ++-|+....
T Consensus 220 dv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aG-A~RiGtS~g 265 (288)
T 3oa3_A 220 NVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAG-AERLGASAG 265 (288)
T ss_dssp HHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTT-CSEEEESCH
T ss_pred HHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcC-CceeehhhH
Confidence 445666665 3589999999 999999999999 786666544
No 242
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=85.90 E-value=0.62 Score=36.25 Aligned_cols=39 Identities=13% Similarity=0.113 Sum_probs=35.0
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++++++++++.|.+|+|.+
T Consensus 263 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~ll~~ga~d~v~~ 302 (422)
T 3tji_A 263 AWLEQVRQQSCVPLALGELFNNPAEWHDLIVNRRIDFIRC 302 (422)
T ss_dssp GGHHHHHHHCCCCEEECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred HHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEec
Confidence 35668999999999999999 9999999999999999887
No 243
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=85.85 E-value=0.97 Score=32.40 Aligned_cols=57 Identities=14% Similarity=0.094 Sum_probs=40.5
Q ss_pred hHHHHHHHHcCCeEEEe-----CC---C---CHHHHHHHHHcCCCcEEecchHHhhCCc----HHHHHhh-CCC
Q 046574 12 HSLLLMRKAFKGTFLVA-----GG---Y---DREDGNKAIAEGRADLVVYGRFFLANPD----LPRRFEF-NAP 69 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~-----Gg---i---~~~~ae~~l~~g~~DlVa~gR~~lanPd----l~~ri~~-g~~ 69 (104)
+..+.+|+.++.||+.. |+ + +.++++++++.| +|+|.+.-....+|+ ++++++. |..
T Consensus 59 ~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~G-ad~V~l~~~~~~~p~~l~~~i~~~~~~g~~ 131 (232)
T 3igs_A 59 DNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAG-AAIIAVDGTARQRPVAVEALLARIHHHHLL 131 (232)
T ss_dssp HHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHT-CSEEEEECCSSCCSSCHHHHHHHHHHTTCE
T ss_pred HHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcC-CCEEEECccccCCHHHHHHHHHHHHHCCCE
Confidence 45678899999998741 33 3 457899999999 799998776666775 5555554 443
No 244
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=85.85 E-value=1.1 Score=34.49 Aligned_cols=39 Identities=8% Similarity=-0.094 Sum_probs=34.9
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++++++++++.|.+|+|.+
T Consensus 241 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~ 280 (392)
T 3ddm_A 241 AEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQP 280 (392)
T ss_dssp HHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEEEECC
T ss_pred HHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEe
Confidence 45667899999999999999 9999999999999999877
No 245
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=85.68 E-value=0.81 Score=34.87 Aligned_cols=39 Identities=10% Similarity=0.244 Sum_probs=34.5
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcC----CCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEG----RADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g----~~DlVa~ 50 (104)
.....+++.+++||++.+.+ ++++++++++.| .+|+|.+
T Consensus 251 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~i 294 (392)
T 1tzz_A 251 ALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQF 294 (392)
T ss_dssp HHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECC
T ss_pred HHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEE
Confidence 45567888888999999999 999999999999 9999887
No 246
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=85.56 E-value=1.2 Score=34.63 Aligned_cols=39 Identities=13% Similarity=0.099 Sum_probs=34.2
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+ ++||++.+.+ ++++++++++.|.+|+|.+
T Consensus 283 ~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 323 (441)
T 2hxt_A 283 LGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQI 323 (441)
T ss_dssp HHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEECC
T ss_pred HHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEe
Confidence 4566788887 5899999999 9999999999999999877
No 247
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=85.53 E-value=0.73 Score=34.05 Aligned_cols=42 Identities=17% Similarity=0.101 Sum_probs=36.9
Q ss_pred CeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 23 GTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 23 ~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
++++..|+++++.+.+++..-.+|-+.+|+.-|. |+|..-+.
T Consensus 208 vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~-~~F~~Ii~ 249 (255)
T 3qst_A 208 VRILYGGSVKPNNCNELAACPDVDGFLVGGASLE-AGFINIVN 249 (255)
T ss_dssp CEEEECSCCCTTTHHHHHHSTTCCEEEECGGGGS-TTHHHHHG
T ss_pred ccEEEcCCcCHhHHHHHhcCCCCCEEEeeHHHhh-HHHHHHHH
Confidence 5788888889999999999988999999999998 89987654
No 248
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=85.52 E-value=1.3 Score=33.62 Aligned_cols=39 Identities=15% Similarity=0.155 Sum_probs=34.5
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++..++||++...+ ++++++++++.+.+|+|.+
T Consensus 225 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~ 264 (368)
T 3q45_A 225 TALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFNL 264 (368)
T ss_dssp GGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEe
Confidence 34667899899999999998 9999999999999999866
No 249
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=85.51 E-value=1.2 Score=34.10 Aligned_cols=38 Identities=37% Similarity=0.546 Sum_probs=32.0
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~ 50 (104)
+..+.+++.+++||++-|-.+++.|+.+++.| +|.|.+
T Consensus 215 ~~i~~i~~~~~~Pv~vkgv~t~e~a~~a~~aG-ad~I~v 252 (380)
T 1p4c_A 215 EALRWLRDLWPHKLLVKGLLSAEDADRCIAEG-ADGVIL 252 (380)
T ss_dssp HHHHHHHHHCCSEEEEEEECCHHHHHHHHHTT-CSEEEE
T ss_pred HHHHHHHHhcCCCEEEEecCcHHHHHHHHHcC-CCEEEE
Confidence 46677889999999986544999999999998 799887
No 250
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=85.29 E-value=1.4 Score=33.27 Aligned_cols=39 Identities=13% Similarity=0.198 Sum_probs=34.8
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++++++++++.+.+|+|.+
T Consensus 229 ~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 268 (375)
T 1r0m_A 229 VDHAELARRIRTPLCLDESVASASDARKALALGAGGVINL 268 (375)
T ss_dssp HHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEE
T ss_pred HHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEE
Confidence 45667889999999999999 9999999999999999877
No 251
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=85.27 E-value=1.4 Score=33.43 Aligned_cols=39 Identities=15% Similarity=0.147 Sum_probs=34.7
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++++++++++.|.+|+|.+
T Consensus 232 ~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~ 271 (377)
T 3my9_A 232 DAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAISV 271 (377)
T ss_dssp HHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEEC
T ss_pred HHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEEEe
Confidence 45667899999999999999 9999999999999999876
No 252
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=85.25 E-value=0.57 Score=34.50 Aligned_cols=56 Identities=16% Similarity=0.148 Sum_probs=43.7
Q ss_pred CcchHHHHHHHHc----------CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 9 ECPHSLLLMRKAF----------KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 9 ~~~~~~~~ir~~~----------~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
++++....||+.+ +++++..|+++++.+.+++..-.+|-+.+|+.-|. .||..-+.
T Consensus 180 ~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~ii~ 245 (248)
T 1o5x_A 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLK-ESFVDIIK 245 (248)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHSEEEECSCCCTTTHHHHHTSTTCCEEEECGGGGS-TTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccCcceEEEcCCCCHHHHHHHHcCCCCCeeEeeHHHHH-HHHHHHHH
Confidence 3344555666652 25788888889999999999888999999999999 88977654
No 253
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=85.14 E-value=1.5 Score=33.19 Aligned_cols=39 Identities=5% Similarity=0.050 Sum_probs=34.6
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++++++++++.+.+|+|.+
T Consensus 229 ~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~ 268 (370)
T 1chr_A 229 QALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSL 268 (370)
T ss_dssp HHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEE
T ss_pred HHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEE
Confidence 35677999999999999998 9999999999999999876
No 254
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=84.94 E-value=1.2 Score=34.17 Aligned_cols=38 Identities=11% Similarity=-0.011 Sum_probs=34.0
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++++++++++.| +|+|.+
T Consensus 232 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~d~v~~ 270 (393)
T 4dwd_A 232 GAMGEVAQRLDITVSAGEQTYTLQALKDLILSG-VRMVQP 270 (393)
T ss_dssp HHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT-CCEECC
T ss_pred HHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCEEEe
Confidence 45667899999999999999 999999999999 999887
No 255
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=84.91 E-value=0.95 Score=34.17 Aligned_cols=29 Identities=21% Similarity=0.341 Sum_probs=26.5
Q ss_pred CeEEEeCCCCHHHHHHHHHcCCCcEEecch
Q 046574 23 GTFLVAGGYDREDGNKAIAEGRADLVVYGR 52 (104)
Q Consensus 23 ~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR 52 (104)
.++.++|||+++.+.++.+.| +|+|++|.
T Consensus 254 v~ieaSGGI~~~~i~~~a~tG-VD~isvG~ 282 (298)
T 3gnn_A 254 AVLEVSGGVNFDTVRAIAETG-VDRISIGA 282 (298)
T ss_dssp EEEEEESSCSTTTHHHHHHTT-CSEEECGG
T ss_pred CeEEEEcCCCHHHHHHHHHcC-CCEEEECC
Confidence 479999999999999999888 79999997
No 256
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=84.89 E-value=1.5 Score=32.91 Aligned_cols=39 Identities=13% Similarity=0.157 Sum_probs=34.7
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++++++++++.|.+|+|.+
T Consensus 222 ~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 261 (369)
T 2zc8_A 222 LDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNV 261 (369)
T ss_dssp HHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred HHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEE
Confidence 45667888889999999998 9999999999999999877
No 257
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=84.69 E-value=0.97 Score=34.84 Aligned_cols=38 Identities=18% Similarity=0.330 Sum_probs=29.9
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecc
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~g 51 (104)
+..+.+|+.+ +.|||+ |++ |++.|+.+++.| +|+|.+|
T Consensus 130 e~I~~ir~~~~~~~Vi~-G~V~T~e~A~~a~~aG-aD~I~Vg 169 (361)
T 3r2g_A 130 KTLKSLRQLLGSRCIMA-GNVATYAGADYLASCG-ADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHTTCEEEE-EEECSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHhcCCCeEEE-cCcCCHHHHHHHHHcC-CCEEEEc
Confidence 3567788888 457776 556 999999999998 7998863
No 258
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=84.50 E-value=1.4 Score=33.95 Aligned_cols=38 Identities=18% Similarity=0.285 Sum_probs=33.0
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~ 50 (104)
+..+.+|+.+++||++-|-.+++.|+.+++.| +|.|.+
T Consensus 207 ~~i~~lr~~~~~PvivK~v~~~e~A~~a~~~G-aD~I~v 244 (352)
T 3sgz_A 207 NDLSLLQSITRLPIILKGILTKEDAELAMKHN-VQGIVV 244 (352)
T ss_dssp HHHHHHHHHCCSCEEEEEECSHHHHHHHHHTT-CSEEEE
T ss_pred HHHHHHHHhcCCCEEEEecCcHHHHHHHHHcC-CCEEEE
Confidence 35778999999999998777999999999998 798876
No 259
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=84.42 E-value=0.93 Score=34.34 Aligned_cols=30 Identities=17% Similarity=0.258 Sum_probs=26.5
Q ss_pred CeEEEeCCCCHHHHHHHHHcCCCcEEecchH
Q 046574 23 GTFLVAGGYDREDGNKAIAEGRADLVVYGRF 53 (104)
Q Consensus 23 ~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~ 53 (104)
..+.++|||+++.+.+..+.| +|+|++|..
T Consensus 252 v~leaSGGIt~~~i~~~A~tG-VD~IsvGal 281 (300)
T 3l0g_A 252 SVLEVSGCVNIRNVRNIALTG-VDYISIGCI 281 (300)
T ss_dssp SEEEEESSCCTTTHHHHHTTT-CSEEECGGG
T ss_pred eEEEEECCCCHHHHHHHHHcC-CCEEEeCcc
Confidence 479999999999999998888 899999953
No 260
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=84.35 E-value=0.78 Score=33.79 Aligned_cols=56 Identities=13% Similarity=0.191 Sum_probs=44.1
Q ss_pred CcchHHHHHHHHc----------CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 9 ECPHSLLLMRKAF----------KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 9 ~~~~~~~~ir~~~----------~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
++++....||+.+ +++++..|+++++.+.+++..-.+|-+.+|+.-|. .+|..-+.
T Consensus 182 ~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~ii~ 247 (250)
T 2j27_A 182 QAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLK-PEFVDIIK 247 (250)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHCCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGS-TTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHHHHHHHHcCCCCCeeeeehHHHH-HHHHHHHH
Confidence 3444555666642 25788889999999999998888999999999999 88977654
No 261
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=84.34 E-value=1.6 Score=34.12 Aligned_cols=39 Identities=10% Similarity=0.116 Sum_probs=34.8
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++++++++++.|.+|+|.+
T Consensus 281 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~ 320 (440)
T 3t6c_A 281 EWLKMLRQQSSTPIAMGELFVNVNEWKPLIDNKLIDYIRC 320 (440)
T ss_dssp GGHHHHHHHCCSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHhhcCCCEEeCcccCCHHHHHHHHHcCCccceee
Confidence 35667999999999999999 9999999999999999877
No 262
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=84.27 E-value=2.2 Score=30.58 Aligned_cols=43 Identities=23% Similarity=0.350 Sum_probs=33.1
Q ss_pred hHHHHHHHHcC--CeEEEeCCC-CHHHHHHHHHcCCCc--EEecchHHh
Q 046574 12 HSLLLMRKAFK--GTFLVAGGY-DREDGNKAIAEGRAD--LVVYGRFFL 55 (104)
Q Consensus 12 ~~~~~ir~~~~--~pvi~~Ggi-~~~~ae~~l~~g~~D--lVa~gR~~l 55 (104)
+..+.+++.++ .||-++||+ +.+++.+.++.| ++ -++.||..+
T Consensus 164 ~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~aG-a~RiG~S~g~~I~ 211 (220)
T 1ub3_A 164 EDVALLVRVAQGRAQVKAAGGIRDRETALRMLKAG-ASRLGTSSGVALV 211 (220)
T ss_dssp HHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTT-CSEEEETTHHHHH
T ss_pred HHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHHCC-CcccchhHHHHHH
Confidence 35567777664 599999999 999999999988 68 555566544
No 263
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=83.95 E-value=1.4 Score=33.66 Aligned_cols=38 Identities=21% Similarity=0.139 Sum_probs=32.6
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~ 50 (104)
+..+.+|+.+++||++-|-.+++.|+.+++.| +|.|.+
T Consensus 219 ~~i~~lr~~~~~PvivK~v~~~e~a~~a~~~G-ad~I~v 256 (368)
T 2nli_A 219 RDIEEIAGHSGLPVFVKGIQHPEDADMAIKRG-ASGIWV 256 (368)
T ss_dssp HHHHHHHHHSSSCEEEEEECSHHHHHHHHHTT-CSEEEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCHHHHHHHHHcC-CCEEEE
Confidence 35678999999999988766999999999998 798877
No 264
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=83.77 E-value=2.4 Score=30.72 Aligned_cols=42 Identities=24% Similarity=0.207 Sum_probs=33.0
Q ss_pred HHHH--HHHHcCCeEEEeCCC-CHHHHHHHHHcCCCc--EEecchHHh
Q 046574 13 SLLL--MRKAFKGTFLVAGGY-DREDGNKAIAEGRAD--LVVYGRFFL 55 (104)
Q Consensus 13 ~~~~--ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~D--lVa~gR~~l 55 (104)
..+. +++.++.||-++||+ +.+++.+.++.| ++ -++.||..+
T Consensus 181 dv~l~~m~~~v~v~VKaaGGirt~~~al~~i~aG-a~RiG~S~g~~I~ 227 (234)
T 1n7k_A 181 VFRLASLAKPLGMGVKASGGIRSGIDAVLAVGAG-ADIIGTSSAVKVL 227 (234)
T ss_dssp HHHHHHHHGGGTCEEEEESSCCSHHHHHHHHHTT-CSEEEETTHHHHH
T ss_pred HHHHHHHHHHHCCCEEEecCCCCHHHHHHHHHcC-ccccchHHHHHHH
Confidence 3455 888877899999999 999999999988 68 455555544
No 265
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=83.37 E-value=2 Score=32.93 Aligned_cols=39 Identities=18% Similarity=0.400 Sum_probs=34.7
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++.+++++++.|.+|+|.+
T Consensus 260 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~i 299 (390)
T 3ugv_A 260 DGYAQLRHDLKTPLMIGENFYGPREMHQALQAGACDLVMP 299 (390)
T ss_dssp HHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 35567899999999999999 9999999999999999876
No 266
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=83.24 E-value=2.6 Score=31.18 Aligned_cols=43 Identities=28% Similarity=0.262 Sum_probs=33.4
Q ss_pred hHHHHHHHHcC--CeEEEeCCC-CHHHHHHHHHcCCCcEEec--chHHh
Q 046574 12 HSLLLMRKAFK--GTFLVAGGY-DREDGNKAIAEGRADLVVY--GRFFL 55 (104)
Q Consensus 12 ~~~~~ir~~~~--~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~--gR~~l 55 (104)
+..+.+++.++ .+|-++||| |.++|.+.++.| ++-|+. |+..+
T Consensus 204 edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~aG-A~RiGtS~g~~I~ 251 (260)
T 3r12_A 204 EDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYG-ADRIGTSSGVKIV 251 (260)
T ss_dssp HHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTT-CSEEEESCHHHHH
T ss_pred HHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcC-CceeecchHHHHH
Confidence 35567888775 489999999 999999999999 785555 44444
No 267
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=83.18 E-value=2.4 Score=32.29 Aligned_cols=39 Identities=21% Similarity=0.264 Sum_probs=32.1
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecc
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~g 51 (104)
+..+.+++.++.||++-|..+++.++.+++.| +|.|.++
T Consensus 215 ~~i~~l~~~~~~pv~vK~~~~~e~a~~a~~~G-ad~I~vs 253 (370)
T 1gox_A 215 KDVAWLQTITSLPILVKGVITAEDARLAVQHG-AAGIIVS 253 (370)
T ss_dssp HHHHHHHHHCCSCEEEECCCSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHHhCCCEEEEecCCHHHHHHHHHcC-CCEEEEC
Confidence 35677888899999975556999999999998 7998873
No 268
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=82.81 E-value=1.7 Score=31.07 Aligned_cols=57 Identities=19% Similarity=0.268 Sum_probs=40.0
Q ss_pred hHHHHHHHHcCCeEEEe-----CC---C---CHHHHHHHHHcCCCcEEecchHHhhCCc----HHHHHhh-CCC
Q 046574 12 HSLLLMRKAFKGTFLVA-----GG---Y---DREDGNKAIAEGRADLVVYGRFFLANPD----LPRRFEF-NAP 69 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~-----Gg---i---~~~~ae~~l~~g~~DlVa~gR~~lanPd----l~~ri~~-g~~ 69 (104)
+..+.+|+.++.|||.. ++ + +.++++++++.| +|+|.+.-....+|+ +++++++ |..
T Consensus 59 ~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aG-ad~I~l~~~~~~~p~~l~~~i~~~~~~g~~ 131 (229)
T 3q58_A 59 ENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAG-ADIIAFDASFRSRPVDIDSLLTRIRLHGLL 131 (229)
T ss_dssp HHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHT-CSEEEEECCSSCCSSCHHHHHHHHHHTTCE
T ss_pred HHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcC-CCEEEECccccCChHHHHHHHHHHHHCCCE
Confidence 45678899999998842 22 3 457899999999 799988766656774 5566554 443
No 269
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=82.73 E-value=4 Score=31.72 Aligned_cols=60 Identities=18% Similarity=0.197 Sum_probs=42.5
Q ss_pred chHHHHHHHHc------CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCC--cHHHHH--hhCCCCC
Q 046574 11 PHSLLLMRKAF------KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANP--DLPRRF--EFNAPLN 71 (104)
Q Consensus 11 ~~~~~~ir~~~------~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanP--dl~~ri--~~g~~l~ 71 (104)
....+.+++++ ...++++||++.+.+.++.+.| +|.+++|..+..-| |++.++ .+|.|..
T Consensus 253 ~~~v~~v~~~ld~~G~~~~~I~aSggl~~~~i~~l~~~G-vD~~gvGt~l~~~~~ld~~~Klv~~~g~p~~ 322 (398)
T 2i1o_A 253 EALIREVRWELALRGRSDIKIMVSGGLDENTVKKLREAG-AEAFGVGTSISSAKPFDFAMDIVEVNGKPET 322 (398)
T ss_dssp HHHHHHHHHHHHHTTCTTSEEEEESSCCHHHHHHHHHTT-CCEEEECHHHHTCCCCCEEEEEEEETTEECC
T ss_pred HHHHHHHHHHHHhCCCCceEEEEeCCCCHHHHHHHHHcC-CCEEEeCcccCCCCCccEEEEEEEeCCcceE
Confidence 34455566542 2479999999999999999998 59999999888766 333333 2455543
No 270
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=82.57 E-value=1.3 Score=32.70 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=37.3
Q ss_pred CeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 23 GTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 23 ~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
++++..|+++++.+.+++..-.+|-+.+|+.-|. .||..-+.
T Consensus 207 vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~Ii~ 248 (251)
T 2vxn_A 207 LRILYGGSVNAANAATLYAKPDINGFLVGGASLK-PEFRDIID 248 (251)
T ss_dssp CEEEEESSCCTTTHHHHHTSTTCCEEEESGGGGS-TTHHHHHH
T ss_pred ccEEEcCCcCHhHHHHHhcCCCCCeeeecHHHHH-HHHHHHHH
Confidence 5788888899999999999989999999999999 88977654
No 271
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=82.53 E-value=1.1 Score=34.18 Aligned_cols=38 Identities=11% Similarity=-0.036 Sum_probs=33.5
Q ss_pred hHHHHHHHH-----cCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKA-----FKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~-----~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++. .++||++.+ + +++.+++++++|.+|+|.+
T Consensus 241 ~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~~~i~~~~~d~v~i 284 (392)
T 3p3b_A 241 ALYEDLKEWLGQRGQNVLIADGE-GLASPHLIEWATRGRVDVLQY 284 (392)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECC-SSCCTTHHHHHHTTSCCEECC
T ss_pred HHHHHHHHhhccCCCCccEEecC-CCCHHHHHHHHHcCCCCEEEe
Confidence 455678888 889999999 9 9999999999999999877
No 272
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=82.36 E-value=0.65 Score=33.87 Aligned_cols=55 Identities=9% Similarity=0.153 Sum_probs=43.9
Q ss_pred CcchHHHHHHHHc--CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHH
Q 046574 9 ECPHSLLLMRKAF--KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRR 63 (104)
Q Consensus 9 ~~~~~~~~ir~~~--~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~r 63 (104)
++++....||+.+ +++++..|+++++.+.+++..-.+|-+.+|++-|.=.||..-
T Consensus 173 ~a~ev~~~IR~~l~~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsl~a~~f~~i 229 (233)
T 2jgq_A 173 DIYLTHGFLKQILNQKTPLLYGGSVNTQNAKEILGIDSVDGLLIGSASWELENFKTI 229 (233)
T ss_dssp HHHHHHHHHHHHSCTTSCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGSHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCcEEEcCCcChhhHHHHhcCCCCCeeEecHHHhChHHHHHH
Confidence 4445667799887 368999899999999999999889999999988854456543
No 273
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=82.30 E-value=2.2 Score=32.85 Aligned_cols=38 Identities=21% Similarity=0.139 Sum_probs=31.5
Q ss_pred hHHHHHHHHcCCeEEEeCC---CCHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGG---YDREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Gg---i~~~~ae~~l~~g~~DlVa~ 50 (104)
+..+.+++.+++|||+=+- ++++.|+.+++.| +|.|.+
T Consensus 196 ~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aG-ad~I~V 236 (365)
T 3sr7_A 196 KHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLG-VKTVDI 236 (365)
T ss_dssp HHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHT-CCEEEC
T ss_pred HHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcC-CCEEEE
Confidence 4567888999999988743 5999999999999 798877
No 274
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=81.99 E-value=3.2 Score=30.08 Aligned_cols=40 Identities=15% Similarity=0.223 Sum_probs=32.1
Q ss_pred hHHHHHHHHcC--CeEEEeCCC-CHHHHHHHHHcCCCcEEecch
Q 046574 12 HSLLLMRKAFK--GTFLVAGGY-DREDGNKAIAEGRADLVVYGR 52 (104)
Q Consensus 12 ~~~~~ir~~~~--~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR 52 (104)
+..+.+++.++ .+|-++||| +.++|.+.++.| ++-|+...
T Consensus 178 edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~aG-a~RiGtS~ 220 (231)
T 3ndo_A 178 QAVEIMARTVGERLGVKASGGIRTAEQAAAMLDAG-ATRLGLSG 220 (231)
T ss_dssp HHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHHTT-CSEEEESS
T ss_pred HHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHhc-chhcccch
Confidence 45667888875 489999999 999999999999 68655543
No 275
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=81.85 E-value=0.77 Score=35.74 Aligned_cols=39 Identities=18% Similarity=0.138 Sum_probs=34.5
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++++++++++.|.+|+|.+
T Consensus 269 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~ 308 (426)
T 4e4f_A 269 ACFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIDYIRT 308 (426)
T ss_dssp GGGHHHHTTCCSCEEECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred HHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 34567899999999999999 9999999999999999876
No 276
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=81.31 E-value=2.7 Score=32.27 Aligned_cols=39 Identities=5% Similarity=-0.009 Sum_probs=34.5
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++.+++++++.+.+|+|.+
T Consensus 245 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~ 284 (400)
T 3mwc_A 245 LDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNI 284 (400)
T ss_dssp HHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEEE
Confidence 45567889899999999998 9999999999999999876
No 277
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=81.24 E-value=1.8 Score=33.02 Aligned_cols=39 Identities=15% Similarity=0.135 Sum_probs=34.5
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++.+++++++.|.+|+|.+
T Consensus 254 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~i 293 (383)
T 3toy_A 254 SGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASDFIMP 293 (383)
T ss_dssp HHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECC
T ss_pred HHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 35567899999999999999 8999999999999999876
No 278
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=81.10 E-value=1.8 Score=32.11 Aligned_cols=48 Identities=19% Similarity=-0.036 Sum_probs=39.3
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcH
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDL 60 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl 60 (104)
+.+..+|+.++.||+.-+.| ++.++.++...| +|.|.+.-..+.+.++
T Consensus 110 ~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~G-AD~VlLi~a~L~~~~l 158 (272)
T 3tsm_A 110 EFLTAARQACSLPALRKDFLFDPYQVYEARSWG-ADCILIIMASVDDDLA 158 (272)
T ss_dssp HHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTT-CSEEEEETTTSCHHHH
T ss_pred HHHHHHHHhcCCCEEECCccCCHHHHHHHHHcC-CCEEEEcccccCHHHH
Confidence 46678899999999988887 898999999888 7999998777754443
No 279
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=80.30 E-value=2.6 Score=32.15 Aligned_cols=39 Identities=21% Similarity=0.269 Sum_probs=30.0
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecc
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~g 51 (104)
+..+.+++.++.|||+.+..+++.|+.+++.| +|+|.+|
T Consensus 135 ~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aG-aD~I~VG 173 (361)
T 3khj_A 135 RTLKEIKSKMNIDVIVGNVVTEEATKELIENG-ADGIKVG 173 (361)
T ss_dssp HHHHHHHHHCCCEEEEEEECSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHhcCCcEEEccCCCHHHHHHHHHcC-cCEEEEe
Confidence 34566777787888874334999999999998 7998874
No 280
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=78.85 E-value=2.9 Score=30.51 Aligned_cols=51 Identities=16% Similarity=0.186 Sum_probs=32.8
Q ss_pred chHHHHHHHHcCCeEEEeCCC--CHHHHHHHHHcCCCc------EEecchHHhhCCcHHH
Q 046574 11 PHSLLLMRKAFKGTFLVAGGY--DREDGNKAIAEGRAD------LVVYGRFFLANPDLPR 62 (104)
Q Consensus 11 ~~~~~~ir~~~~~pvi~~Ggi--~~~~ae~~l~~g~~D------lVa~gR~~lanPdl~~ 62 (104)
++.+..||+..+..++++=|| .....+++++.| +| +|.+||+.+.-+|-..
T Consensus 181 ~~e~~~ir~~~~~~~~l~PGIg~qg~tp~~a~~~G-~d~~~~~~livvGR~I~~A~dp~~ 239 (255)
T 3qw3_A 181 PVALARVRARAPTLWFLVPGIGAQGGSLKASLDAG-LRADGSGMLINVSRGLARAADPRA 239 (255)
T ss_dssp HHHHHHHHHHCSSCCEEECCC-----CHHHHHHHH-CCTTSCCEEEEESHHHHTSSCHHH
T ss_pred HHHHHHHHHHCCCCeEEECCcCCCCCCHHHHHHcC-CCcccCeeEEEeChhhcCCCCHHH
Confidence 445678898886433456666 223455566555 35 5999999999887543
No 281
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=78.74 E-value=1.9 Score=33.32 Aligned_cols=37 Identities=14% Similarity=0.257 Sum_probs=29.4
Q ss_pred HHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEec
Q 046574 13 SLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~ 50 (104)
..+.+++.+++||++-|-.+++.|+.+++.| +|.|.+
T Consensus 243 ~i~~lr~~~~~PvivKgv~~~e~A~~a~~aG-ad~I~v 279 (392)
T 2nzl_A 243 DIKWLRRLTSLPIVAKGILRGDDAREAVKHG-LNGILV 279 (392)
T ss_dssp HHHHHC--CCSCEEEEEECCHHHHHHHHHTT-CCEEEE
T ss_pred HHHHHHHhhCCCEEEEecCCHHHHHHHHHcC-CCEEEe
Confidence 4567888888899987656999999999998 798887
No 282
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=78.54 E-value=3.5 Score=30.78 Aligned_cols=38 Identities=13% Similarity=0.077 Sum_probs=30.5
Q ss_pred hHHHHHHHHcCCeEEEeC--C-CCHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAG--G-YDREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~G--g-i~~~~ae~~l~~g~~DlVa~ 50 (104)
+..+.+|+.++.||++-+ . ++++.|..+.+.| +|.|.+
T Consensus 168 ~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~G-ad~I~v 208 (349)
T 1p0k_A 168 KRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAG-AAAVDI 208 (349)
T ss_dssp HHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHT-CSEEEE
T ss_pred HHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcC-CCEEEE
Confidence 456778888889988853 3 5999999999988 798877
No 283
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=78.48 E-value=3.8 Score=31.22 Aligned_cols=39 Identities=13% Similarity=0.199 Sum_probs=34.3
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++.++.++++.|.+|+|.+
T Consensus 229 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~ 268 (379)
T 3r0u_A 229 KAMAEITKFSNIPVVADESVFDAKDAERVIDEQACNMINI 268 (379)
T ss_dssp HHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEE
Confidence 45667889899999999888 9999999999999998776
No 284
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=78.38 E-value=2.6 Score=32.86 Aligned_cols=38 Identities=24% Similarity=0.358 Sum_probs=29.7
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecc
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~g 51 (104)
+..+.+++.++.|||+ |++ +++.|+.+++.| +|+|.+|
T Consensus 174 e~I~~ik~~~~i~Vi~-g~V~t~e~A~~a~~aG-AD~I~vG 212 (400)
T 3ffs_A 174 RTLKEIKSKMNIDVIV-GNVVTEEATKELIENG-ADGIKVG 212 (400)
T ss_dssp HHHHHHHTTCCCEEEE-EEECSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHhcCCCeEEE-eecCCHHHHHHHHHcC-CCEEEEe
Confidence 4556677777778886 445 999999999998 7998884
No 285
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=78.05 E-value=2.9 Score=33.46 Aligned_cols=38 Identities=26% Similarity=0.211 Sum_probs=32.1
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~ 50 (104)
+..+.+|+.+++||++-|..+++.|..+++.| +|.|.+
T Consensus 333 ~~i~~lr~~~~~PvivKgv~~~e~A~~a~~aG-ad~I~v 370 (511)
T 1kbi_A 333 KDIEELKKKTKLPIVIKGVQRTEDVIKAAEIG-VSGVVL 370 (511)
T ss_dssp HHHHHHHHHCSSCEEEEEECSHHHHHHHHHTT-CSEEEE
T ss_pred HHHHHHHHHhCCcEEEEeCCCHHHHHHHHHcC-CCEEEE
Confidence 35678999999999987655899999999988 799888
No 286
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=77.97 E-value=3 Score=32.62 Aligned_cols=38 Identities=18% Similarity=0.237 Sum_probs=30.7
Q ss_pred hHHHHHHHHc-CCeEEEeCCCCHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~ 50 (104)
+..+.+++.+ +.||++.++.++++|+.+++.| +|+|.+
T Consensus 267 e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G-~d~I~v 305 (494)
T 1vrd_A 267 ETLEMIKADYPDLPVVAGNVATPEGTEALIKAG-ADAVKV 305 (494)
T ss_dssp HHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTT-CSEEEE
T ss_pred HHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcC-CCEEEE
Confidence 4567788888 5688875555999999999988 799877
No 287
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=77.81 E-value=1.5 Score=32.18 Aligned_cols=41 Identities=12% Similarity=0.111 Sum_probs=35.3
Q ss_pred CeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 23 GTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 23 ~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
++++..|+++++.+.+++..-.+|-+.+|+.-| +|+|..-+
T Consensus 204 vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL-~~~F~~ii 244 (249)
T 3th6_A 204 VRIQYGGSVNAGNCKELGRKPDIDGFLVGGASL-KPEFVQII 244 (249)
T ss_dssp CCEEECSCCCTTTHHHHHTSTTCCEEEECGGGG-STHHHHHH
T ss_pred ccEEEcCccCHhHHHHHhcCCCCCEEEeehHhh-hHHHHHHH
Confidence 578888888999999999988899999999877 57987755
No 288
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=77.58 E-value=3.1 Score=31.69 Aligned_cols=39 Identities=23% Similarity=0.155 Sum_probs=33.9
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++.+++++++.+.+|+|.+
T Consensus 233 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~ 272 (385)
T 3i6e_A 233 ELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGVSI 272 (385)
T ss_dssp HHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred HHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEe
Confidence 35567888888999999888 9999999999999999866
No 289
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=77.35 E-value=3.2 Score=31.75 Aligned_cols=37 Identities=14% Similarity=0.185 Sum_probs=29.1
Q ss_pred HHHHHHHHc-CCeEEEeCCCCHHHHHHHHHcCCCcEEec
Q 046574 13 SLLLMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 13 ~~~~ir~~~-~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~ 50 (104)
..+.+|+.+ +.||++.+..+++.|+.+++.| +|+|.+
T Consensus 184 ~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~G-ad~I~v 221 (404)
T 1eep_A 184 LIKKIKTKYPNLDLIAGNIVTKEAALDLISVG-ADCLKV 221 (404)
T ss_dssp HHHHHHHHCTTCEEEEEEECSHHHHHHHHTTT-CSEEEE
T ss_pred HHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcC-CCEEEE
Confidence 446678888 6788874444999999999888 899877
No 290
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=77.28 E-value=2.3 Score=34.75 Aligned_cols=36 Identities=25% Similarity=0.405 Sum_probs=28.7
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+..+.||+.+...-|.+|++ |++.++.+++.| +|.|
T Consensus 311 ~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aG-AD~v 347 (556)
T 4af0_A 311 EFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAG-ADGL 347 (556)
T ss_dssp HHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHT-CSEE
T ss_pred HHHHHHHhhCCcceEEeccccCHHHHHHHHHcC-CCEE
Confidence 46677888886545556777 999999999999 7876
No 291
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=77.08 E-value=2.4 Score=33.02 Aligned_cols=37 Identities=27% Similarity=0.446 Sum_probs=30.4
Q ss_pred HHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecc
Q 046574 13 SLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 13 ~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~g 51 (104)
..+.+++.+ +.|++ .|++ +.+.+..+++.| +|.|.+|
T Consensus 264 ~i~~l~~~~p~~pvi-~G~v~t~~~a~~~~~~G-ad~I~vg 302 (491)
T 1zfj_A 264 KIAEIRAHFPNRTLI-AGNIATAEGARALYDAG-VDVVKVG 302 (491)
T ss_dssp HHHHHHHHCSSSCEE-EEEECSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHCCCCcEe-CCCccCHHHHHHHHHcC-CCEEEEC
Confidence 456778888 67988 6777 999999999998 7998665
No 292
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1
Probab=75.61 E-value=3.6 Score=32.92 Aligned_cols=44 Identities=9% Similarity=0.067 Sum_probs=30.7
Q ss_pred HHHHHHHHc------CCeEEEeCCCCHHHHHHHHHcCC-CcEEecchHHhh
Q 046574 13 SLLLMRKAF------KGTFLVAGGYDREDGNKAIAEGR-ADLVVYGRFFLA 56 (104)
Q Consensus 13 ~~~~ir~~~------~~pvi~~Ggi~~~~ae~~l~~g~-~DlVa~gR~~la 56 (104)
..+.+++.+ ...++++|||+.+.+.++.+.|. +|.+++|..++.
T Consensus 271 l~~~~r~~ld~~G~~~~kI~aSggld~~~i~~l~~~G~~~~sfGvGT~Lt~ 321 (494)
T 2f7f_A 271 ISKRVREQLDEAGFTEAKIYASNDLDENTILNLKMQKSKIDVWGVGTKLIT 321 (494)
T ss_dssp HHHHHHHHHHHTTCTTCEEEECSSCCHHHHHHHHHTTCCCCEEEECHHHHT
T ss_pred HHHHHHHHHHhCCCCceEEEEECCCCHHHHHHHHHcCCCEEEEecCccccc
Confidence 335555554 35799999999999999998883 344455566664
No 293
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=75.40 E-value=4 Score=31.31 Aligned_cols=37 Identities=22% Similarity=0.279 Sum_probs=28.4
Q ss_pred HHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecc
Q 046574 13 SLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 13 ~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~g 51 (104)
..+.+++.+ +.+||+ |.+ |+++|+.+++.| +|+|.+|
T Consensus 139 ~I~~ik~~~p~v~Vi~-G~v~t~e~A~~a~~aG-AD~I~vG 177 (366)
T 4fo4_A 139 RIRETRAAYPHLEIIG-GNVATAEGARALIEAG-VSAVKVG 177 (366)
T ss_dssp HHHHHHHHCTTCEEEE-EEECSHHHHHHHHHHT-CSEEEEC
T ss_pred HHHHHHHhcCCCceEe-eeeCCHHHHHHHHHcC-CCEEEEe
Confidence 455688887 456665 545 999999999999 7998873
No 294
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=75.16 E-value=4.8 Score=30.80 Aligned_cols=39 Identities=13% Similarity=-0.037 Sum_probs=34.3
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++.+++||++...+ ++.++.++++.+.+|+|.+
T Consensus 240 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~ 279 (388)
T 3tcs_A 240 AQTKQVTDALDIDVTGGEQDCDLPTWQRMIDMRAVDIVQP 279 (388)
T ss_dssp HHHHHHHHHCSSCEEECTTCCCHHHHHHHHHHTCCSEECC
T ss_pred HHHHHHHHhcCCCEEcCCccCCHHHHHHHHHcCCCCEEEe
Confidence 45567899999999998888 9999999999999999876
No 295
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=74.59 E-value=5.4 Score=27.38 Aligned_cols=54 Identities=7% Similarity=0.184 Sum_probs=39.0
Q ss_pred hHHHHHHHHcCCeEEE-------eCCC----CHHHHHHHHHcCCCcEEecchHHhhCC-----cHHHHHhh
Q 046574 12 HSLLLMRKAFKGTFLV-------AGGY----DREDGNKAIAEGRADLVVYGRFFLANP-----DLPRRFEF 66 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~-------~Ggi----~~~~ae~~l~~g~~DlVa~gR~~lanP-----dl~~ri~~ 66 (104)
...+.+++.++.|++. .+++ +.++++.+++.| +|.|.++-....+| +++++++.
T Consensus 46 ~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~G-ad~v~l~~~~~~~p~~~~~~~i~~~~~ 115 (223)
T 1y0e_A 46 EDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQ-CEVIALDATLQQRPKETLDELVSYIRT 115 (223)
T ss_dssp HHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHT-CSEEEEECSCSCCSSSCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCC-CCEEEEeeecccCcccCHHHHHHHHHH
Confidence 4566788888889863 2233 467888999888 79999887666677 56666665
No 296
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=73.91 E-value=5.5 Score=30.24 Aligned_cols=39 Identities=13% Similarity=0.162 Sum_probs=34.1
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++.+++++++.+.+|+|.+
T Consensus 235 ~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~ 274 (382)
T 3dgb_A 235 AGMVRLNASSPAPIMADESIECVEDAFNLAREGAASVFAL 274 (382)
T ss_dssp HHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEEE
T ss_pred HHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 35567889899999998888 9999999999999999876
No 297
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=73.90 E-value=4.7 Score=31.86 Aligned_cols=38 Identities=21% Similarity=0.325 Sum_probs=29.8
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecc
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~g 51 (104)
+..+.+++.+ +.||++ |++ +++.|+.+++.| +|+|.+|
T Consensus 259 ~~v~~i~~~~p~~~Vi~-g~v~t~e~a~~l~~aG-aD~I~vg 298 (490)
T 4avf_A 259 ERVRWVKQTFPDVQVIG-GNIATAEAAKALAEAG-ADAVKVG 298 (490)
T ss_dssp HHHHHHHHHCTTSEEEE-EEECSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHHCCCceEEE-eeeCcHHHHHHHHHcC-CCEEEEC
Confidence 4667788888 457776 545 999999999998 7998763
No 298
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=73.14 E-value=1.7 Score=32.60 Aligned_cols=55 Identities=13% Similarity=-0.006 Sum_probs=40.3
Q ss_pred cchHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhh
Q 046574 10 CPHSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEF 66 (104)
Q Consensus 10 ~~~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~ 66 (104)
..+.++.+++.+++||++-+++ ..+.++.+.+.| +|.|. .-..+..+++.+.++.
T Consensus 66 ~~~~i~~i~~~v~iPvl~k~~i~~ide~qil~aaG-AD~Id-~s~~~~~~~li~~i~~ 121 (297)
T 4adt_A 66 DPLKIEEIRKCISINVLAKVRIGHFVEAQILEELK-VDMLD-ESEVLTMADEYNHINK 121 (297)
T ss_dssp CHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHHTT-CSEEE-EETTSCCSCSSCCCCG
T ss_pred CHHHHHHHHHhcCCCEEEeccCCcHHHHHHHHHcC-CCEEE-cCCCCCHHHHHHHHHh
Confidence 3467778999999999988777 688888888878 79992 2222355677766655
No 299
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=72.94 E-value=5.4 Score=30.38 Aligned_cols=39 Identities=18% Similarity=0.013 Sum_probs=33.6
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++.+++||++...+ ++.+++++++.+.+|+|.+
T Consensus 233 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~ 272 (386)
T 3fv9_G 233 AETKSLRARCALPLLLDELIQTETDLIAAIRDDLCDGVGL 272 (386)
T ss_dssp HHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEE
Confidence 34567888888999998888 9999999999999998876
No 300
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=72.77 E-value=1.9 Score=31.72 Aligned_cols=56 Identities=14% Similarity=0.106 Sum_probs=41.9
Q ss_pred CcchHHHHHHHHc----------CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 9 ECPHSLLLMRKAF----------KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 9 ~~~~~~~~ir~~~----------~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
++++....||+.+ +++++..|+++++.+.+++....+|-+.+|+.-|.=.+|..-+
T Consensus 181 ~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~ii 246 (250)
T 1yya_A 181 DAEAMHQAIRKALSERYGEAFASRVRILYGGSVNPKNFADLLSMPNVDGGLVGGASLELESFLALL 246 (250)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHTTCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCHHHHHHHHcCCCCCeeEeeHHHhChHHHHHHH
Confidence 3444555677652 3588888889999999999998899999999888555565544
No 301
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=72.45 E-value=3.1 Score=32.00 Aligned_cols=52 Identities=19% Similarity=0.334 Sum_probs=35.3
Q ss_pred chHHHHHHHHcCCeEEEeCCCC--HHHHHHHHHcCCCc-----EEecchHHhhCCcHHH
Q 046574 11 PHSLLLMRKAFKGTFLVAGGYD--REDGNKAIAEGRAD-----LVVYGRFFLANPDLPR 62 (104)
Q Consensus 11 ~~~~~~ir~~~~~pvi~~Ggi~--~~~ae~~l~~g~~D-----lVa~gR~~lanPdl~~ 62 (104)
++.+..+|+.....++++.||. ..+.++++..|..+ +|.+||+.+.-+|...
T Consensus 277 ~~el~~IR~~~~~~~iLtPGIgaqGGD~~~a~~~Gad~~~~~~iIvVGR~I~~A~dp~~ 335 (353)
T 2ffc_A 277 YDEIKKIRELFPDCYILAPGVGAQKGDLRKMLCNGYSKNYEKVLINVGRAITKSGSPQQ 335 (353)
T ss_dssp HHHHHHHHHHCTTCCEEECCBSTTCBCHHHHHHHHCCSSGGGEEEEECHHHHTSSCHHH
T ss_pred HHHHHHHHHhCCCCeEEeCcccCCCCCHHHHHHcCCCcccCcEEEEECHHHcCCCCHHH
Confidence 3455678887765566788882 22355666666433 9999999998887443
No 302
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=72.35 E-value=1.6 Score=32.20 Aligned_cols=56 Identities=11% Similarity=0.103 Sum_probs=41.8
Q ss_pred CcchHHHHHHHHc---------CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 9 ECPHSLLLMRKAF---------KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 9 ~~~~~~~~ir~~~---------~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
++++....||+.+ +++++..|+++++.+.+++..-.+|-+.+|+.-|.=.+|..-+
T Consensus 182 ~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~Ii 246 (255)
T 1tre_A 182 QAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIV 246 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCEEEECSCCCTTTHHHHHTSTTCCEEEESGGGGCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcChhhcCcccEEEcCCCCHHHHHHHHcCCCCCeeEecHHHhChHHHHHHH
Confidence 3444555677652 3578888888999999999988899999999888555566544
No 303
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=72.33 E-value=6.1 Score=30.61 Aligned_cols=47 Identities=17% Similarity=0.162 Sum_probs=36.5
Q ss_pred cchHHHHHHHHc------CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCC
Q 046574 10 CPHSLLLMRKAF------KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANP 58 (104)
Q Consensus 10 ~~~~~~~ir~~~------~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanP 58 (104)
.....+.+++++ ...++++||++.+.+.++.+. +|.+++|..+..-|
T Consensus 250 ~~~~v~~~r~~ld~~G~~~~~I~aSggl~~~~i~~l~~~--vD~~gvGt~l~~~~ 302 (395)
T 2i14_A 250 FRKIIEEVRWELKVRGYDWVKIFVSGGLDEEKIKEIVDV--VDAFGVGGAIASAK 302 (395)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEEESSCCHHHHHTTGGG--CSEEEECHHHHTCC
T ss_pred HHHHHHHHHHHHHhCCCCceEEEEECCCCHHHHHHHHHh--CCEEEeCcccCCCC
Confidence 334555566542 347999999999999999887 89999999888666
No 304
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=72.19 E-value=1.8 Score=30.56 Aligned_cols=43 Identities=21% Similarity=0.145 Sum_probs=29.0
Q ss_pred CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHh-----hCCcHHHHH
Q 046574 22 KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFL-----ANPDLPRRF 64 (104)
Q Consensus 22 ~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~l-----anPdl~~ri 64 (104)
+.|+|++||++|+...+++..-....|-+..++= .|++.+.++
T Consensus 151 ~~p~~LAGGL~peNV~~ai~~~~p~gVDvsSGvE~~pG~KD~~ki~~f 198 (205)
T 1nsj_A 151 FRYLVLSGGLNPENVRSAIDVVRPFAVDVSSGVEAFPGKKDHDSIKMF 198 (205)
T ss_dssp SSCEEEESSCCTTTHHHHHHHHCCSEEEESGGGEEETTEECHHHHHHH
T ss_pred CCcEEEECCCCHHHHHHHHHhcCCCEEEECCceecCCCCcCHHHHHHH
Confidence 5799999999999988887753356666654443 355544443
No 305
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=72.14 E-value=2 Score=31.98 Aligned_cols=56 Identities=13% Similarity=0.160 Sum_probs=43.1
Q ss_pred CcchHHHHHHHHc------CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 9 ECPHSLLLMRKAF------KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 9 ~~~~~~~~ir~~~------~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
+.++.-..||+.+ +++++-.|+++++.+.+++....+|-+.+|+.-|.=.+|..-+
T Consensus 207 ~aqevh~~IR~~l~~~~a~~~rIlYGGSV~~~N~~el~~~~dIDG~LVGgASL~~~~F~~Ii 268 (272)
T 4g1k_A 207 QAQQVHAFLRGRLAAKGAGHVSLLYGGSVKADNAAELFGQPDIDGGLIGGASLKSGDFLAIC 268 (272)
T ss_dssp HHHHHHHHHHHHHHHHTCTTSCEEECSCCCTTTHHHHHTSTTCCEEEECGGGGSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCceEEEcCCcCHhHHHHHhcCCCCCEEEechHhcCHHHHHHHH
Confidence 4445556677765 3578888888999999999998999999999887533676544
No 306
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=71.79 E-value=1.1 Score=32.97 Aligned_cols=56 Identities=14% Similarity=0.157 Sum_probs=43.8
Q ss_pred CcchHHHHHHHHc----------CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 9 ECPHSLLLMRKAF----------KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 9 ~~~~~~~~ir~~~----------~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
++++....||+.+ +++++..|+++++.+.+++..-.+|-+.+|+.-|. .+|..-+.
T Consensus 179 ~a~evh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~Ii~ 244 (247)
T 1ney_A 179 DAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLK-PEFVDIIN 244 (247)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHCCEEEESSCCTTTGGGGTTCTTCCEEEESGGGGS-THHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcChhhcccceEEEcCCcCHhHHHHHHcCCCCCeeEeehHHHH-HHHHHHHH
Confidence 3444555666622 25788889999999999999988999999999999 88876553
No 307
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=70.99 E-value=5.3 Score=31.66 Aligned_cols=38 Identities=21% Similarity=0.282 Sum_probs=30.1
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecc
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~g 51 (104)
+..+.+++.+ +.||++ |++ +++.|+.+++.| +|+|.+|
T Consensus 261 ~~i~~ir~~~p~~~Vi~-g~v~t~e~a~~l~~aG-aD~I~Vg 300 (496)
T 4fxs_A 261 QRIRETRAAYPHLEIIG-GNVATAEGARALIEAG-VSAVKVG 300 (496)
T ss_dssp HHHHHHHHHCTTCCEEE-EEECSHHHHHHHHHHT-CSEEEEC
T ss_pred HHHHHHHHHCCCceEEE-cccCcHHHHHHHHHhC-CCEEEEC
Confidence 4667788888 567777 555 999999999999 7998764
No 308
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=70.90 E-value=1.5 Score=32.43 Aligned_cols=56 Identities=13% Similarity=0.086 Sum_probs=42.3
Q ss_pred CcchHHHHHHHHc---------CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 9 ECPHSLLLMRKAF---------KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 9 ~~~~~~~~ir~~~---------~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
++++....||+.+ +++++..|+++++.+.+++....+|-+.+|+.-|.=.+|..-+
T Consensus 184 ~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~Ii 248 (256)
T 1aw2_A 184 DAQRIHAQIRAHIAEKSEAVAKNVVIQYGGSVKPENAAAYFAQPDIDGALVGGAALDAKSFAAIA 248 (256)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHCEEEECSCCCTTTHHHHTTSTTCCEEEESGGGGCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHHHHHHHHcCCCCCeeeecHHHhChHHHHHHH
Confidence 3445556677753 2578888888999999999998899999999888555576544
No 309
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=70.53 E-value=3.6 Score=28.21 Aligned_cols=49 Identities=22% Similarity=0.287 Sum_probs=33.3
Q ss_pred HHHHHHHHcCCeEEE-eCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 13 SLLLMRKAFKGTFLV-AGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~-~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
..+.+++.++.++|+ .|++ +.+.++.+++.| +|.|.++. .++++....+
T Consensus 48 ~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~G-ad~V~~~~---~~~~~~~~~~ 98 (212)
T 2v82_A 48 SIPAIVDAYGDKALIGAGTVLKPEQVDALARMG-CQLIVTPN---IHSEVIRRAV 98 (212)
T ss_dssp HHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTT-CCEEECSS---CCHHHHHHHH
T ss_pred HHHHHHHhCCCCeEEEeccccCHHHHHHHHHcC-CCEEEeCC---CCHHHHHHHH
Confidence 344555666665544 4666 899999999988 79998775 3456655443
No 310
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=70.37 E-value=2.6 Score=31.01 Aligned_cols=57 Identities=12% Similarity=0.082 Sum_probs=42.5
Q ss_pred CcchHHHHHHHHc----------CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 9 ECPHSLLLMRKAF----------KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 9 ~~~~~~~~ir~~~----------~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
++++.-..||+.+ +++++..|+++++.+.+++..-.+|-+.+|+.-|.=.+|..-+.
T Consensus 181 ~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~Ii~ 247 (252)
T 2btm_A 181 DANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKPDNIRDFLAQQQIDGALVGGASLEPASFLQLVE 247 (252)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHTTSEEEEESSCCTTTHHHHHTSTTCCEEEESGGGSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCHHHHHHHHcCCCCCeeEecHHHhChHHHHHHHH
Confidence 3444555677652 35888888899999999998888999999998885555665543
No 311
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=70.34 E-value=1.8 Score=32.00 Aligned_cols=43 Identities=9% Similarity=-0.058 Sum_probs=35.5
Q ss_pred CeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 23 GTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 23 ~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
++++..|+++++.+.+++..-.+|-+.+|+.-|.=.||..-+.
T Consensus 203 vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~Ii~ 245 (259)
T 2i9e_A 203 IRIQYGGSVTAANCKELASQPDIDGFLVGGASLKPEFVDIINA 245 (259)
T ss_dssp CEEEECSCCCTTTHHHHHTSTTCCEEEESGGGGSTHHHHHHTT
T ss_pred ccEEEcCCCCHhhHHHHhcCCCCCeeeechHhhChHHHHHHHH
Confidence 5788888889999999999988999999998886556765543
No 312
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=69.95 E-value=2.2 Score=31.44 Aligned_cols=42 Identities=14% Similarity=0.117 Sum_probs=34.0
Q ss_pred CeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 23 GTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 23 ~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
++++..|+++++.+.+++..-.+|-+.+|+.-|.=.+|..-+
T Consensus 209 ~rIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~~~~F~~Ii 250 (254)
T 3m9y_A 209 TRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQLL 250 (254)
T ss_dssp SEEEECSCCCTTTHHHHHTSTTCCEEEESGGGSSHHHHHHHH
T ss_pred ccEEEcCCcCHHHHHHHHcCCCCCeEEeeHHhhCHHHHHHHH
Confidence 578888888999999999888899999999887533565544
No 313
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=69.24 E-value=1.6 Score=32.28 Aligned_cols=56 Identities=18% Similarity=0.176 Sum_probs=41.1
Q ss_pred CcchHHHHHHHHc----------CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCC--cHHHHH
Q 046574 9 ECPHSLLLMRKAF----------KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANP--DLPRRF 64 (104)
Q Consensus 9 ~~~~~~~~ir~~~----------~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanP--dl~~ri 64 (104)
++++....||+.+ +++++..|+++++.+.+++..-.+|-+.+|+.-|.=. +|..-+
T Consensus 183 ~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASLka~~~~F~~ii 250 (255)
T 1b9b_A 183 QAQEVHAFIRKLLSEMYDEETAGSIRILYGGSIKPDNFLGLIVQKDIDGGLVGGASLKESFIELARIM 250 (255)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHSEEEEESSCCHHHHTTTSSSTTCCEEEESGGGTSTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccCcceEEEcCcCCHHHHHHHHcCCCCCeeEeehHhhcCccccHHHHH
Confidence 3444555677652 2578888889999999999888899999998877433 465543
No 314
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=69.21 E-value=4.5 Score=27.47 Aligned_cols=40 Identities=20% Similarity=0.272 Sum_probs=29.3
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEEecchH
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLVVYGRF 53 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~ 53 (104)
+..+.+|+.++ ..+|..|.+ ++++++.+++.| +|+| ++-.
T Consensus 50 ~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~G-ad~i-v~~~ 91 (205)
T 1wa3_A 50 TVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESG-AEFI-VSPH 91 (205)
T ss_dssp HHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHT-CSEE-ECSS
T ss_pred HHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcC-CCEE-EcCC
Confidence 34667888764 345666666 999999999988 7999 6533
No 315
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=68.98 E-value=5.5 Score=30.57 Aligned_cols=39 Identities=10% Similarity=0.002 Sum_probs=33.7
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++...+ ++.+++++++.|.+|+|.+
T Consensus 251 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~ 290 (398)
T 4dye_A 251 EGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHG 290 (398)
T ss_dssp HHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCSEEEE
T ss_pred HHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCCEEEe
Confidence 34567888889999998888 9999999999999999876
No 316
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=68.93 E-value=1.6 Score=32.84 Aligned_cols=38 Identities=13% Similarity=0.052 Sum_probs=32.6
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcC-CCcEEec
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEG-RADLVVY 50 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g-~~DlVa~ 50 (104)
....+++.+++||++...+ ++++++++++.+ .+|+|.+
T Consensus 226 ~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~ 265 (356)
T 3ro6_B 226 WLRALPKAIRRRIAADESLLGPADAFALAAPPAACGIFNI 265 (356)
T ss_dssp HHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSEEEE
T ss_pred HHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCEEEE
Confidence 4456777777899999999 999999999998 8999887
No 317
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=68.34 E-value=10 Score=28.67 Aligned_cols=39 Identities=13% Similarity=0.193 Sum_probs=33.7
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.-.+ ++.++.++++.+.+|+|.+
T Consensus 234 ~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~ 273 (381)
T 3fcp_A 234 AALVRLSQQIETAILADEAVATAYDGYQLAQQGFTGAYAL 273 (381)
T ss_dssp HHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEe
Confidence 34567888889999998888 9999999999999998876
No 318
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=68.24 E-value=8.6 Score=22.94 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=27.1
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+|+..+.|+|...+. +.+.+.++++.|..|++.
T Consensus 63 ~~~~~lr~~~~~~ii~~t~~~~~~~~~~~~~~ga~~~l~ 101 (120)
T 3f6p_A 63 EVCREVRKKYDMPIIMLTAKDSEIDKVIGLEIGADDYVT 101 (120)
T ss_dssp HHHHHHHTTCCSCEEEEEESSCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhcCCCCEEEEECCCChHHHHHHHhCCcceeEc
Confidence 45666777666777666555 788888899999766654
No 319
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=67.71 E-value=6.1 Score=30.10 Aligned_cols=39 Identities=10% Similarity=0.077 Sum_probs=32.7
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecch
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGR 52 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR 52 (104)
.....+++.+++|| ...+ ++++++++++.|.+|+|.+--
T Consensus 230 ~~~~~l~~~~~iPI--dE~~~~~~~~~~~~~~~~~d~v~~k~ 269 (391)
T 3gd6_A 230 DGLYQLRLKTDYPI--SEHVWSFKQQQEMIKKDAIDIFNISP 269 (391)
T ss_dssp HHHHHHHHHCSSCE--EEECCCHHHHHHHHHHTCCSEEEECH
T ss_pred HHHHHHHHHcCCCc--CCCCCCHHHHHHHHHcCCCCEEEECc
Confidence 45667999999998 6667 999999999999999988743
No 320
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=67.07 E-value=5.1 Score=29.51 Aligned_cols=55 Identities=16% Similarity=0.166 Sum_probs=41.0
Q ss_pred CcchHHHHHHHHc----------CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 9 ECPHSLLLMRKAF----------KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 9 ~~~~~~~~ir~~~----------~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
++++....||+.+ +++++..|+++++.+.+++....+|-+.+|+.-| +|+|..-+
T Consensus 185 ~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL-~a~F~~Ii 249 (257)
T 2yc6_A 185 QAEEVHVGLRKWFVEKVAAEGAQHIRIIYGGSANGSNNEKLGQCPNIDGFLVGGASL-KPEFMTMI 249 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGG-STHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcChhhcccceEEEcCccCHHHHHHHHcCCCCCeeeecHHHH-HHHHHHHH
Confidence 3344555566652 3688888889999999999998899999998877 55565544
No 321
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=66.98 E-value=11 Score=27.00 Aligned_cols=33 Identities=21% Similarity=0.270 Sum_probs=26.9
Q ss_pred HHHHHHHH---cC--CeEEEeCCC-CHHHHHHHHHc---CCCc
Q 046574 13 SLLLMRKA---FK--GTFLVAGGY-DREDGNKAIAE---GRAD 46 (104)
Q Consensus 13 ~~~~ir~~---~~--~pvi~~Ggi-~~~~ae~~l~~---g~~D 46 (104)
..+.+++. ++ .+|-++||| +.+++.+.++. | ++
T Consensus 170 dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a~~~G-a~ 211 (226)
T 1vcv_A 170 RAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVDAIGWG-ED 211 (226)
T ss_dssp HHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHHHCSC-SC
T ss_pred HHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHCC-CC
Confidence 45567776 65 699999999 99999999998 7 45
No 322
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=66.97 E-value=5.7 Score=31.60 Aligned_cols=37 Identities=19% Similarity=0.330 Sum_probs=28.7
Q ss_pred hHHHHHHHHcCC-eEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKG-TFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~-pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+..+.+++.++. ||++ |++ +.+.|+.+++.| +|+|.+
T Consensus 286 ~~i~~i~~~~~~~~vi~-g~v~t~e~a~~~~~aG-ad~i~v 324 (511)
T 3usb_A 286 DKVKEVRAKYPSLNIIA-GNVATAEATKALIEAG-ANVVKV 324 (511)
T ss_dssp HHHHHHHHHCTTSEEEE-EEECSHHHHHHHHHHT-CSEEEE
T ss_pred hHHHHHHHhCCCceEEe-eeeccHHHHHHHHHhC-CCEEEE
Confidence 456778888864 6664 566 999999999999 798865
No 323
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=66.44 E-value=2.2 Score=31.29 Aligned_cols=42 Identities=10% Similarity=-0.011 Sum_probs=34.7
Q ss_pred CeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 23 GTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 23 ~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
++++..|+++++.+.+++..-.+|-+.+|+.-|.=.||..-+
T Consensus 204 vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~ii 245 (248)
T 1r2r_A 204 TRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIIN 245 (248)
T ss_dssp CCEEECSCCCTTTHHHHHTSTTCCEEEESGGGGSTHHHHHHT
T ss_pred ccEEEcCCcCHhHHHHHHcCCCCCeeEechHHhChHHHHHHH
Confidence 578888888999999999998999999999888655565543
No 324
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=66.41 E-value=11 Score=26.63 Aligned_cols=51 Identities=25% Similarity=0.284 Sum_probs=38.2
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhh
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEF 66 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~ 66 (104)
+..+.+++.+...++..|.+ +.++++.+++.| +|+|..+. .|++.+...+.
T Consensus 57 ~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aG-Ad~v~~p~---~d~~v~~~ar~ 108 (224)
T 1vhc_A 57 DAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSG-ADFVVTPG---LNPKIVKLCQD 108 (224)
T ss_dssp HHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHT-CSEEECSS---CCHHHHHHHHH
T ss_pred HHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCC-CCEEEECC---CCHHHHHHHHH
Confidence 35556777776667777877 999999999999 79998873 56665555444
No 325
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=65.88 E-value=2.8 Score=31.26 Aligned_cols=44 Identities=9% Similarity=-0.034 Sum_probs=37.1
Q ss_pred CeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhh
Q 046574 23 GTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEF 66 (104)
Q Consensus 23 ~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~ 66 (104)
++++..|+++++.+.+++..-.+|-+.+|++-|.=.||..-+..
T Consensus 223 vrILYGGSV~~~N~~el~~~~diDG~LVGgASLka~~F~~Ii~~ 266 (275)
T 1mo0_A 223 TRIIYGGSVTADNAAELGKKPDIDGFLVGGASLKPDFVKIINAR 266 (275)
T ss_dssp SCEEEESSCCTTTHHHHTTSTTCCEEEESGGGGSTHHHHHHHHH
T ss_pred ccEEEcCCCCHhhHHHHhcCCCCCeeEechHHhChHHHHHHHHh
Confidence 57888899999999999999899999999988865567766654
No 326
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=65.69 E-value=4.1 Score=28.51 Aligned_cols=39 Identities=15% Similarity=0.092 Sum_probs=29.8
Q ss_pred HHHHHHHHcCCeEEEeCCCCH-------HHHHHHHHcCCCcEEecch
Q 046574 13 SLLLMRKAFKGTFLVAGGYDR-------EDGNKAIAEGRADLVVYGR 52 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi~~-------~~ae~~l~~g~~DlVa~gR 52 (104)
..+.+|+.++.||.+-+++++ +.++.+++.| +|.|.++-
T Consensus 71 ~i~~i~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~G-ad~v~~~~ 116 (248)
T 1geq_A 71 IVKEFRRHSSTPIVLMTYYNPIYRAGVRNFLAEAKASG-VDGILVVD 116 (248)
T ss_dssp HHHHHHTTCCCCEEEEECHHHHHHHCHHHHHHHHHHHT-CCEEEETT
T ss_pred HHHHHHhhCCCCEEEEeccchhhhcCHHHHHHHHHHCC-CCEEEECC
Confidence 456677777788887665654 7888898888 79999974
No 327
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=65.08 E-value=14 Score=27.71 Aligned_cols=44 Identities=16% Similarity=0.072 Sum_probs=33.0
Q ss_pred HHHHHHHcC-CeEEEeC-CC-CHHHHHHHHHc--CCCcEEecchHHhhCC
Q 046574 14 LLLMRKAFK-GTFLVAG-GY-DREDGNKAIAE--GRADLVVYGRFFLANP 58 (104)
Q Consensus 14 ~~~ir~~~~-~pvi~~G-gi-~~~~ae~~l~~--g~~DlVa~gR~~lanP 58 (104)
.+.+++.-+ +.|++.| +| ++++++.+++. | +|-+..|..+..=|
T Consensus 218 ~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~t~G-~~G~~gASsier~p 266 (286)
T 2p10_A 218 IEAARTIRDDIIILSHGGPIANPEDARFILDSCQG-CHGFYGASSMERLP 266 (286)
T ss_dssp HHHHHHHCSCCEEEEESTTCCSHHHHHHHHHHCTT-CCEEEESHHHHHHH
T ss_pred HHHHHHhCCCcEEEecCCCCCCHHHHHHHHhcCCC-ccEEEeehhhhcCC
Confidence 344444433 3556555 78 99999999998 5 79999999988877
No 328
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=64.28 E-value=2.6 Score=29.69 Aligned_cols=43 Identities=14% Similarity=0.093 Sum_probs=29.1
Q ss_pred CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHh-----hCCcHHHHHh
Q 046574 22 KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFL-----ANPDLPRRFE 65 (104)
Q Consensus 22 ~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~l-----anPdl~~ri~ 65 (104)
+.|+|++||++|+...+++ .-....|-+..++= .||+.++++.
T Consensus 146 ~~p~~LAGGL~peNV~~ai-~~~p~gVDvsSGvE~~pG~KD~~ki~~fi 193 (203)
T 1v5x_A 146 GRRVILAGGIAPENLEEVL-ALRPYALDLASGVEEAPGVKSAEKLRALF 193 (203)
T ss_dssp TSCEEECSSCCSTTHHHHH-HHCCSEEEESGGGEEETTEECHHHHHHHH
T ss_pred CCcEEEECCCCHHHHHHHH-hcCCCEEEeCCceecCCCCcCHHHHHHHH
Confidence 5699999999999887777 42356666655443 4555555443
No 329
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=63.48 E-value=11 Score=26.49 Aligned_cols=49 Identities=12% Similarity=0.150 Sum_probs=36.9
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
+..+.+++.+...++..|.+ +.++++.+++.| +|+|-.+. .|++.....
T Consensus 56 ~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aG-Ad~v~~p~---~d~~v~~~~ 105 (214)
T 1wbh_A 56 DAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAG-AQFAISPG---LTEPLLKAA 105 (214)
T ss_dssp HHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHT-CSCEEESS---CCHHHHHHH
T ss_pred HHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcC-CCEEEcCC---CCHHHHHHH
Confidence 35556777887677788878 999999999999 79998873 466664443
No 330
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=63.33 E-value=15 Score=22.17 Aligned_cols=38 Identities=8% Similarity=0.113 Sum_probs=28.7
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+|+.. ..|+|+..+. +.+...++++.|..|++.
T Consensus 76 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~ 115 (135)
T 3snk_A 76 PGIVEARALWATVPLIAVSDELTSEQTRVLVRMNASDWLH 115 (135)
T ss_dssp TTHHHHHGGGTTCCEEEEESCCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhhCCCCcEEEEeCCCCHHHHHHHHHcCcHhhcc
Confidence 4667788876 4677777666 899999999999766643
No 331
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=63.31 E-value=9.6 Score=26.37 Aligned_cols=54 Identities=4% Similarity=-0.082 Sum_probs=38.4
Q ss_pred hHHHHHHHHcCCeEEEe-------CCC----CHHHHHHHHHcCCCcEEecchHHhhCC------cHHHHHhh
Q 046574 12 HSLLLMRKAFKGTFLVA-------GGY----DREDGNKAIAEGRADLVVYGRFFLANP------DLPRRFEF 66 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~-------Ggi----~~~~ae~~l~~g~~DlVa~gR~~lanP------dl~~ri~~ 66 (104)
...+.+|+.++.|++.. +++ +.++++.+++.| +|.|.++-....+| +++++++.
T Consensus 59 ~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~G-ad~V~l~~~~~~~~~~~~~~~~i~~i~~ 129 (234)
T 1yxy_A 59 RDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALN-IAVIAMDCTKRDRHDGLDIASFIRQVKE 129 (234)
T ss_dssp HHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTT-CSEEEEECCSSCCTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcC-CCEEEEcccccCCCCCccHHHHHHHHHH
Confidence 45667888888898642 122 468899999888 79999877666666 46666665
No 332
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=63.30 E-value=2.9 Score=30.85 Aligned_cols=43 Identities=12% Similarity=0.115 Sum_probs=35.7
Q ss_pred CeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 23 GTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 23 ~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
++++..|+++++.+.+++..-.+|-+.+|+.-|.=.+|..-+.
T Consensus 213 vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~ii~ 255 (261)
T 1m6j_A 213 TRIQYGGSVNPANCNELAKKADIDGFLVGGASLDAAKFKTIIN 255 (261)
T ss_dssp SCEEECSCCCTTTHHHHHTSTTCCEEEESGGGGSHHHHHHHHG
T ss_pred ccEEEcCCcCHhhHHHHhcCCCCCeeEecHHHhChHHHHHHHH
Confidence 5788888889999999999989999999998886556765543
No 333
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=62.82 E-value=11 Score=28.73 Aligned_cols=39 Identities=13% Similarity=0.076 Sum_probs=33.5
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++.+++||++.-.+ +..++.++++.+.+|+|.+
T Consensus 248 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~i 287 (391)
T 4e8g_A 248 EEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCDGFGM 287 (391)
T ss_dssp HHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEe
Confidence 34567888888999998888 9999999999999999876
No 334
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=62.74 E-value=4.7 Score=31.76 Aligned_cols=52 Identities=17% Similarity=0.158 Sum_probs=32.3
Q ss_pred chHHHHHHHHcCCeEEEeCCC-----CHHHHHHHHH--cCCCcEEecchHHhhCCcHHH
Q 046574 11 PHSLLLMRKAFKGTFLVAGGY-----DREDGNKAIA--EGRADLVVYGRFFLANPDLPR 62 (104)
Q Consensus 11 ~~~~~~ir~~~~~pvi~~Ggi-----~~~~ae~~l~--~g~~DlVa~gR~~lanPdl~~ 62 (104)
++.+..+|+.++...+++=|| +|++|.+.-. +|...+|.+||+.+.-+|...
T Consensus 182 ~~e~~~ir~~~~~~~~l~PGig~qg~tp~~a~~~g~d~~~~~~livvgR~I~~A~dp~~ 240 (453)
T 3qw4_B 182 PVALARVRARAPTLWFLVPGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARAADPRA 240 (453)
T ss_dssp HHHHHHHHHHCSSCCEEECCSSTTCCCHHHHHHHHCCTTSCCEEEEESHHHHSCSCHHH
T ss_pred HHHHHHHHHhCCCCeEEECCcCCCCCCHHHHHHhcCCcccCCceEecChhhccCCCHHH
Confidence 456678999886433456555 4555433321 122346999999998888653
No 335
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=61.53 E-value=11 Score=29.55 Aligned_cols=37 Identities=11% Similarity=0.195 Sum_probs=29.5
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+..+.+++.+ +.||++ |++ +.+.|+.+++.| +|+|.+
T Consensus 285 ~~i~~i~~~~~~~pvi~-~~v~t~~~a~~l~~aG-ad~I~v 323 (514)
T 1jcn_A 285 AMVHYIKQKYPHLQVIG-GNVVTAAQAKNLIDAG-VDGLRV 323 (514)
T ss_dssp HHHHHHHHHCTTCEEEE-EEECSHHHHHHHHHHT-CSEEEE
T ss_pred HHHHHHHHhCCCCceEe-cccchHHHHHHHHHcC-CCEEEE
Confidence 4567788888 668876 555 999999999999 798855
No 336
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=61.30 E-value=14 Score=27.70 Aligned_cols=39 Identities=10% Similarity=0.020 Sum_probs=33.2
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++..++||++.-.+ ++.++.++++.+.+|+|.+
T Consensus 230 ~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~i 269 (365)
T 3ik4_A 230 AGMAQVTAQSGFAVAADESARSAHDVLRIAREGTASVINI 269 (365)
T ss_dssp HHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCCSEEEE
T ss_pred HHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEEEE
Confidence 45567888889999998788 9999999999999998855
No 337
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=60.81 E-value=12 Score=27.09 Aligned_cols=36 Identities=11% Similarity=-0.003 Sum_probs=29.4
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+..+.+++.++.|+++..++ +.+.++.+++.| +|.|
T Consensus 68 ~~i~~i~~~~~~Pvi~~~~~~~~~~~~~~~~aG-ad~v 104 (297)
T 2zbt_A 68 KIIKEIMAAVSIPVMAKVRIGHFVEAMILEAIG-VDFI 104 (297)
T ss_dssp HHHHHHHTTCSSCEEEEEETTCHHHHHHHHHTT-CSEE
T ss_pred HHHHHHHHhcCCCeEEEeccCCHHHHHHHHHCC-CCEE
Confidence 45667888788899988777 788999998888 7988
No 338
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=60.79 E-value=6.5 Score=28.84 Aligned_cols=40 Identities=20% Similarity=0.338 Sum_probs=30.0
Q ss_pred eEEEeCCCCHH-----------HHHHHH-HcCCCcEEecchHHhhCCcHHHHH
Q 046574 24 TFLVAGGYDRE-----------DGNKAI-AEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 24 pvi~~Ggi~~~-----------~ae~~l-~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
-++++-||.+. ..++++ +.| +|++.+||+....+|-...+
T Consensus 192 f~~vTPGIr~~~~~~~~~~r~~tp~~a~~~aG-ad~iVvGR~I~~a~dp~~a~ 243 (260)
T 3eww_A 192 FLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRG-SDIIIVGRGIISAADRLEAA 243 (260)
T ss_dssp SEEEECSBCSSSEECTTSCEEBCHHHHHTTSC-CSEEEESHHHHTSSCHHHHH
T ss_pred cEEECCCcCCCCCCCccCCCccCHHHHHHhcC-CCEEEEChhhcCCCCHHHHH
Confidence 46777777332 367788 777 79999999999988876544
No 339
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=60.31 E-value=3.9 Score=29.37 Aligned_cols=21 Identities=33% Similarity=0.457 Sum_probs=17.7
Q ss_pred CCeEEEeCCCCHHHHHHHHHc
Q 046574 22 KGTFLVAGGYDREDGNKAIAE 42 (104)
Q Consensus 22 ~~pvi~~Ggi~~~~ae~~l~~ 42 (104)
+.|+|++||++|+...++++.
T Consensus 173 ~~p~iLAGGL~peNV~~Ai~~ 193 (228)
T 4aaj_A 173 KIPVIVAGGLNAENVEEVIKV 193 (228)
T ss_dssp HSCEEEESSCCTTTHHHHHHH
T ss_pred cCCeEEECCCCHHHHHHHHHH
Confidence 359999999999888888764
No 340
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=60.29 E-value=19 Score=21.93 Aligned_cols=38 Identities=11% Similarity=0.082 Sum_probs=27.3
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++....|+|...+. +.+.+.++++.|..|++.
T Consensus 65 ~l~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~ 103 (136)
T 2qzj_A 65 TLCKKIRNVTTCPIVYMTYINEDQSILNALNSGGDDYLI 103 (136)
T ss_dssp HHHHHHHTTCCCCEEEEESCCCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHccCCCCCEEEEEcCCCHHHHHHHHHcCCcEEEE
Confidence 45566776555677776666 888889999999777653
No 341
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=59.91 E-value=3.5 Score=30.72 Aligned_cols=57 Identities=11% Similarity=0.144 Sum_probs=41.9
Q ss_pred CcchHHHHHHHHc---------CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 9 ECPHSLLLMRKAF---------KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 9 ~~~~~~~~ir~~~---------~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
++++.-..||+.+ +++++-.|+++++.+.+++....+|-+.+|+.-|.=.+|..-+.
T Consensus 205 ~aqevh~~IR~~l~~~~~~~a~~~rIlYGGSV~~~Na~el~~~~dIDG~LVGgASL~~~~F~~Ii~ 270 (275)
T 3kxq_A 205 DVAEVHAFIHHKMHSRFGDEGAKIRLLYGGSVKPSNAFELLSTAHVNGALIGGASLKAIDFLTICD 270 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCEEECSCCCTTTHHHHHTSTTCCEEEESGGGSSHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHhhhhhcccceEEEcCCcCHhHHHHHHcCCccceEEeehhhcCHHHHHHHHH
Confidence 3344445566653 35788878889999999999989999999998875446766543
No 342
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=58.68 E-value=5.7 Score=31.37 Aligned_cols=38 Identities=21% Similarity=0.256 Sum_probs=28.6
Q ss_pred hHHHHHHHHcC--CeEEEeCCC-CHHHHHHHHHcCCCcEEecc
Q 046574 12 HSLLLMRKAFK--GTFLVAGGY-DREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 12 ~~~~~ir~~~~--~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~g 51 (104)
+..+.+++.+. .|||+ |++ +++.++.+++.| +|+|.+|
T Consensus 272 ~~i~~lk~~~~~~~~Vi~-G~V~t~~~a~~l~~aG-ad~I~Vg 312 (503)
T 1me8_A 272 ITIGWIREKYGDKVKVGA-GNIVDGEGFRYLADAG-ADFIKIG 312 (503)
T ss_dssp HHHHHHHHHHGGGSCEEE-EEECSHHHHHHHHHHT-CSEEEEC
T ss_pred hHHHHHHHhCCCCceEee-ccccCHHHHHHHHHhC-CCeEEec
Confidence 34567788774 56774 555 999999999999 7988554
No 343
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=57.99 E-value=5.9 Score=29.02 Aligned_cols=41 Identities=7% Similarity=0.058 Sum_probs=31.6
Q ss_pred EEEeCCC-CHH-HHHHHHHcCCCcEEecchHHhhCCcHHHHHhh
Q 046574 25 FLVAGGY-DRE-DGNKAIAEGRADLVVYGRFFLANPDLPRRFEF 66 (104)
Q Consensus 25 vi~~Ggi-~~~-~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~ 66 (104)
|+-+.+. ..+ .++.+|++| +|+|..+-..++||++.+++..
T Consensus 64 VVe~A~~~av~e~~~~iL~aG-~dvv~~S~gaLad~~l~~~L~~ 106 (253)
T 1j5p_A 64 VVECASPEAVKEYSLQILKNP-VNYIIISTSAFADEVFRERFFS 106 (253)
T ss_dssp EEECSCHHHHHHHHHHHTTSS-SEEEECCGGGGGSHHHHHHHHH
T ss_pred EEECCCHHHHHHHHHHHHHCC-CCEEEcChhhhcCHHHHHHHHH
Confidence 4444444 333 488999999 6999999999999999888764
No 344
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=57.91 E-value=29 Score=21.26 Aligned_cols=38 Identities=16% Similarity=0.154 Sum_probs=28.1
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+.++.+++... .|+|+..+. +.+.+.++++.|..|++.
T Consensus 83 ~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~ 122 (150)
T 4e7p_A 83 EVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVL 122 (150)
T ss_dssp HHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHCCCcEEEe
Confidence 56677877653 577776666 899999999999766654
No 345
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=57.46 E-value=26 Score=20.46 Aligned_cols=38 Identities=21% Similarity=0.206 Sum_probs=26.1
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++.-..|+|...+. +.+.+.++++.|..|++.
T Consensus 63 ~~~~~l~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~ 101 (122)
T 1zgz_A 63 MLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVT 101 (122)
T ss_dssp HHHHHHHTTCCCEEEEEESSCCHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHhcCCCCEEEEECCCChhhHHHHHHhCHHHHcc
Confidence 45666776334677766655 788888888888766653
No 346
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A*
Probab=57.39 E-value=9.9 Score=29.11 Aligned_cols=53 Identities=17% Similarity=0.186 Sum_probs=33.5
Q ss_pred chHHHHHHHHcCCeEEEeCCC-----CHHHHHHHHH--cCCCcEEecchHHhhCCcHHHH
Q 046574 11 PHSLLLMRKAFKGTFLVAGGY-----DREDGNKAIA--EGRADLVVYGRFFLANPDLPRR 63 (104)
Q Consensus 11 ~~~~~~ir~~~~~pvi~~Ggi-----~~~~ae~~l~--~g~~DlVa~gR~~lanPdl~~r 63 (104)
++.+..+|+.++..++++=|| +.+.+-.... ++..|+|.+||+.+.-||-...
T Consensus 265 p~e~~~iR~~~p~~~iLtPGIGAQggDq~rv~tp~~a~~~g~~~ivVGR~I~~A~dP~~A 324 (342)
T 3n3m_A 265 YDEMNYIRTYFPNCYILSPGIGAQNGDLHKTLTNGYHKSYEKILINIGRAITKNPYPQKA 324 (342)
T ss_dssp HHHHHHHHHHSTTCCEEECCSSTTCCCHHHHHHHHCCSSGGGEEEEECHHHHTSSCHHHH
T ss_pred HHHHHHHHHhCCCCeEEeCCCCcCCCCHHHHHhhhhhhhcCceEEEcChhhhcCCCHHHH
Confidence 345667888886555666666 3433211111 1336899999999998886543
No 347
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=57.35 E-value=29 Score=20.84 Aligned_cols=38 Identities=16% Similarity=0.231 Sum_probs=27.4
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+.++.+++.- ..|+|+..+. +.+...++++.|..|++.
T Consensus 75 ~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~ 114 (137)
T 2pln_A 75 SFVSRIKEKHSSIVVLVSSDNPTSEEEVHAFEQGADDYIA 114 (137)
T ss_dssp HHHHHHHHHSTTSEEEEEESSCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHcCCceeee
Confidence 4566777763 4677777666 888889999999766654
No 348
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=57.29 E-value=27 Score=20.59 Aligned_cols=37 Identities=19% Similarity=0.149 Sum_probs=26.9
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+..+.+++.. ..|+|...+. +.+.+.++++.|..|++
T Consensus 64 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l 102 (126)
T 1dbw_A 64 ELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVDFI 102 (126)
T ss_dssp HHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHhCHHHhe
Confidence 4566777754 3577776666 88888999999976654
No 349
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=57.16 E-value=5.9 Score=29.36 Aligned_cols=42 Identities=14% Similarity=0.118 Sum_probs=34.2
Q ss_pred CeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHH
Q 046574 23 GTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLANPDLPRRF 64 (104)
Q Consensus 23 ~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri 64 (104)
++++..|+++++.+.+++....+|-+.+|+.-|.=.+|..-+
T Consensus 211 ~rIlYGGSV~~~N~~el~~~~diDG~LVGgASL~~~~F~~Ii 252 (267)
T 3ta6_A 211 VRVLYGGSVNAKNVGDIVAQDDVDGGLVGGASLDGEHFATLA 252 (267)
T ss_dssp SCEEECSCCCTTTHHHHHTSTTCCEEEECGGGGSHHHHHHHH
T ss_pred ceEEEcCCcCHhHHHHHhcCCCCCEEEechHhcCHHHHHHHH
Confidence 478887878999999999999999999999888533476544
No 350
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=57.15 E-value=29 Score=20.88 Aligned_cols=51 Identities=12% Similarity=0.155 Sum_probs=32.6
Q ss_pred hHHHHHHH--Hc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 12 HSLLLMRK--AF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 12 ~~~~~ir~--~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
+.++.+|+ .. ..|+|+..+. +.+.+.++++.|..+++. +|+ .-.+|..++.
T Consensus 68 ~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~--KP~-~~~~l~~~i~ 122 (140)
T 3lua_A 68 EVLSAIRNNSRTANTPVIIATKSDNPGYRHAALKFKVSDYIL--KPY-PTKRLENSVR 122 (140)
T ss_dssp HHHHHHHHSGGGTTCCEEEEESCCCHHHHHHHHHSCCSEEEE--SSC-CTTHHHHHHH
T ss_pred HHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHHcCCCEEEE--CCC-CHHHHHHHHH
Confidence 45667777 44 4577777666 899999999999666543 442 2234544443
No 351
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=56.98 E-value=24 Score=21.95 Aligned_cols=38 Identities=11% Similarity=0.088 Sum_probs=27.8
Q ss_pred hHHHHHHHH---cCCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKA---FKGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~---~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+.++.+|+. -..|+|+..+. +.+...++++.|..|++.
T Consensus 68 ~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~ 109 (154)
T 3gt7_A 68 ALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLECGADDFIT 109 (154)
T ss_dssp HHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHhCCCcCCCCEEEEECCCChHHHHHHHHCCCCEEEe
Confidence 566777775 24577777666 889999999999766653
No 352
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=56.79 E-value=9.6 Score=28.21 Aligned_cols=37 Identities=16% Similarity=0.022 Sum_probs=28.8
Q ss_pred hHHHHHHHHcCCeEEEeC---CCCHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAG---GYDREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~G---gi~~~~ae~~l~~g~~DlVa~ 50 (104)
+..+.+|+ ++.||++=+ |++++.|..+.+.| +|+|.+
T Consensus 172 ~~i~~vr~-~~~Pv~vK~v~~g~~~e~a~~~~~~G-~d~I~v 211 (332)
T 1vcf_A 172 ERLAELLP-LPFPVMVKEVGHGLSREAALALRDLP-LAAVDV 211 (332)
T ss_dssp HHHHHHCS-CSSCEEEECSSSCCCHHHHHHHTTSC-CSEEEC
T ss_pred HHHHHHHc-CCCCEEEEecCCCCCHHHHHHHHHcC-CCEEEe
Confidence 45667788 888988753 36999999888888 799877
No 353
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=56.68 E-value=25 Score=22.51 Aligned_cols=38 Identities=18% Similarity=0.069 Sum_probs=27.9
Q ss_pred chHHHHHHHHc---CCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 11 PHSLLLMRKAF---KGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 11 ~~~~~~ir~~~---~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
-+.++.||+.- +.|||...+. +.+...++++.|..|++
T Consensus 73 ~el~~~ir~~~~~~~ipvI~lTa~~~~~~~~~~~~~Ga~~yl 114 (134)
T 3to5_A 73 IDLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNGYI 114 (134)
T ss_dssp HHHHHHHHHSTTTTTCCEEEEESSCCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhCCCCCCCeEEEEECCCCHHHHHHHHHCCCCEEE
Confidence 35777888642 3577766666 89999999999977664
No 354
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=56.52 E-value=28 Score=21.03 Aligned_cols=37 Identities=11% Similarity=0.311 Sum_probs=26.6
Q ss_pred hHHHHHHHHc--CCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~--~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+..+.+|+.. ..|+|...+. +.+.+.++++.|..|++
T Consensus 69 ~~~~~lr~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l 108 (133)
T 2r25_B 69 LSTKMIRRDLGYTSPIVALTAFADDSNIKECLESGMNGFL 108 (133)
T ss_dssp HHHHHHHHHSCCCSCEEEEESCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHhhcCCCCCEEEEECCCCHHHHHHHHHcCCCEEE
Confidence 4667787643 4577766666 88888999999976654
No 355
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=56.00 E-value=31 Score=20.79 Aligned_cols=38 Identities=18% Similarity=0.220 Sum_probs=28.1
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++... .|+|+..+. +.+.+.++++.|..+++.
T Consensus 66 ~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~ 105 (143)
T 3jte_A 66 DILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFEYLR 105 (143)
T ss_dssp HHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHhCcceeEe
Confidence 56677887764 577776666 888899999999666543
No 356
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=55.91 E-value=25 Score=20.87 Aligned_cols=37 Identities=16% Similarity=0.182 Sum_probs=25.6
Q ss_pred hHHHHHHHHc---CCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAF---KGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~---~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+..+.+|+.- ..|+|...+. +.+.+.++++.|..|++
T Consensus 63 ~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l 103 (122)
T 3gl9_A 63 TVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVM 103 (122)
T ss_dssp HHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHhcccccCCCEEEEecCCchHHHHHHHhcChhhhc
Confidence 4556676542 3577666555 88889999999976654
No 357
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=55.60 E-value=18 Score=27.36 Aligned_cols=39 Identities=13% Similarity=0.124 Sum_probs=32.2
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++..++||++.-.+ ++.+++++++.+.+|+|.+
T Consensus 242 ~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~i 281 (393)
T 1wuf_A 242 VDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINL 281 (393)
T ss_dssp HHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred HHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEe
Confidence 34567888888898887777 9999999999999998766
No 358
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=55.60 E-value=29 Score=20.89 Aligned_cols=38 Identities=18% Similarity=0.109 Sum_probs=27.6
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+.++.+|+.. ..|+|+..+. +.+.+.++++.|..|++.
T Consensus 69 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~ 108 (136)
T 3kto_A 69 ELLETLVKRGFHLPTIVMASSSDIPTAVRAMRASAADFIE 108 (136)
T ss_dssp HHHHHHHHTTCCCCEEEEESSCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHcChHHhee
Confidence 4566777765 3577776666 888999999999766643
No 359
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=55.40 E-value=31 Score=20.66 Aligned_cols=38 Identities=16% Similarity=0.160 Sum_probs=27.8
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++.. ..|+|...+. +.+.+.+++..|..+++.
T Consensus 66 ~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~ 105 (133)
T 3b2n_A 66 EVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVVNDVDAYVL 105 (133)
T ss_dssp HHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHCCCCcEEEEecCCCHHHHHHHHHcCCcEEEE
Confidence 4667787754 3687777666 888889999999766653
No 360
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=55.39 E-value=28 Score=20.76 Aligned_cols=38 Identities=18% Similarity=0.285 Sum_probs=27.0
Q ss_pred hHHHHHHHH-c-CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKA-F-KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~-~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++. . ..|+|+..+. +.+.+.++++.|..+++.
T Consensus 69 ~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~ 109 (136)
T 3hdv_A 69 DLIRTIRASERAALSIIVVSGDTDVEEAVDVMHLGVVDFLL 109 (136)
T ss_dssp HHHHHHHTSTTTTCEEEEEESSCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCChHHHHHHHhCCcceEEe
Confidence 466677775 3 3577776666 888899999999655543
No 361
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=55.34 E-value=28 Score=20.10 Aligned_cols=38 Identities=18% Similarity=0.131 Sum_probs=26.4
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++.-..|+|...+. +.+.+..+++.|..|++.
T Consensus 62 ~~~~~l~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~ 100 (120)
T 2a9o_A 62 EVAKTIRKTSSVPILMLSAKDSEFDKVIGLELGADDYVT 100 (120)
T ss_dssp HHHHHHHHHCCCCEEEEESCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHhCCCCCEEEEecCCchHHHHHHHhCCHhheEe
Confidence 45667777555676666555 778888888888766653
No 362
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=54.91 E-value=29 Score=20.77 Aligned_cols=37 Identities=16% Similarity=0.059 Sum_probs=27.3
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+.++.+++... .|+|+..+. +.+...++++.|..|++
T Consensus 68 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l 106 (137)
T 3hdg_A 68 EMLDRIKAGGAKPYVIVISAFSEMKYFIKAIELGVHLFL 106 (137)
T ss_dssp HHHHHHHHTTCCCEEEECCCCCCHHHHHHHHHHCCSEEC
T ss_pred HHHHHHHhcCCCCcEEEEecCcChHHHHHHHhCCcceeE
Confidence 56677777654 578887777 88888899999965543
No 363
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=54.40 E-value=22 Score=21.70 Aligned_cols=37 Identities=14% Similarity=0.106 Sum_probs=26.9
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+.++.+++... .|+|+..+. +.+.+.+++..|..|++
T Consensus 84 ~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l 122 (146)
T 4dad_A 84 AAIEKLSRLHPGLTCLLVTTDASSQTLLDAMRAGVRDVL 122 (146)
T ss_dssp HHHHHHHHHCTTCEEEEEESCCCHHHHHHHHTTTEEEEE
T ss_pred HHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHhCCceeE
Confidence 45667777664 577777666 88999999998865554
No 364
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=54.16 E-value=27 Score=22.61 Aligned_cols=38 Identities=16% Similarity=0.265 Sum_probs=28.8
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+.++.+++... .|+|...+. +.+.+.++++.|..|++.
T Consensus 68 ~~~~~l~~~~~~~~ii~lt~~~~~~~~~~a~~~Ga~~~l~ 107 (184)
T 3rqi_A 68 SLIAPLCDLQPDARILVLTGYASIATAVQAVKDGADNYLA 107 (184)
T ss_dssp HHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHhCHHHhee
Confidence 56777887654 587777666 899999999999766653
No 365
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=53.95 E-value=33 Score=20.46 Aligned_cols=38 Identities=8% Similarity=-0.021 Sum_probs=27.2
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+.++.+++.-..|+|+..+. +.+...++++.|..|++.
T Consensus 72 ~~~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~ 110 (140)
T 3cg0_A 72 ETAARLAAGCNLPIIFITSSQDVETFQRAKRVNPFGYLA 110 (140)
T ss_dssp HHHHHHHHHSCCCEEEEECCCCHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHhCCCCCEEEEecCCCHHHHHHHHhcCCCEEEe
Confidence 46667777644677766665 888888999888666554
No 366
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=53.84 E-value=31 Score=20.13 Aligned_cols=37 Identities=14% Similarity=0.137 Sum_probs=26.1
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+..+.+++.-..|+|...+. +.+.+.++++.|..|++
T Consensus 64 ~~~~~l~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l 101 (123)
T 1xhf_A 64 LLARELREQANVALMFLTGRDNEVDKILGLEIGADDYI 101 (123)
T ss_dssp HHHHHHHHHCCCEEEEEESCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHhCCCCcEEEEECCCChHHHHHHHhcCcceEE
Confidence 45667777645677766665 78888888888876654
No 367
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=53.76 E-value=32 Score=20.32 Aligned_cols=41 Identities=22% Similarity=0.149 Sum_probs=28.6
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEEecchHH
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLVVYGRFF 54 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~ 54 (104)
+..+.+|+... .|+|+..+. +.+...++++.|..|++ -+|+
T Consensus 68 ~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l--~KP~ 110 (130)
T 3eod_A 68 KLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVL--LKPV 110 (130)
T ss_dssp HHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCCSEEE--ESCC
T ss_pred HHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEE--eCCC
Confidence 56677777653 577766666 88888999999966653 3444
No 368
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=53.39 E-value=8.6 Score=27.75 Aligned_cols=37 Identities=22% Similarity=0.370 Sum_probs=26.9
Q ss_pred cCCe-EEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCC
Q 046574 21 FKGT-FLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANP 58 (104)
Q Consensus 21 ~~~p-vi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanP 58 (104)
++-| ++++||+ +++...+.+.++.+|+|.+|-++. +|
T Consensus 11 ~~~~~~~~t~g~p~~~~~~~~l~~~Gad~ielg~pr~-~~ 49 (264)
T 1xm3_A 11 FQSRLLLGTGKYPSFDIQKEAVAVSESDILTFAVRRM-NI 49 (264)
T ss_dssp ESCCEEEECSCSSCHHHHHHHHHHHTCSEEEEETTSS-TT
T ss_pred ecCCCEEEecCCCCHHHHHHHHHHcCCeEEEEccccc-cc
Confidence 3444 5566888 888776777665699999997766 54
No 369
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=53.16 E-value=10 Score=28.61 Aligned_cols=39 Identities=21% Similarity=0.366 Sum_probs=27.9
Q ss_pred eEEEeCCCCHH-----------HHHHHH-HcCCCcEEecchHHhhCCcHHHH
Q 046574 24 TFLVAGGYDRE-----------DGNKAI-AEGRADLVVYGRFFLANPDLPRR 63 (104)
Q Consensus 24 pvi~~Ggi~~~-----------~ae~~l-~~g~~DlVa~gR~~lanPdl~~r 63 (104)
-++++-||.++ .-.+++ +.| +|++.+|||....+|=...
T Consensus 244 fl~vTPGIrp~~~~~~~g~qv~TP~~Ai~~~G-aD~iVVGRpIt~A~dP~~a 294 (312)
T 3g3d_A 244 FLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRG-SDIIIVGRGIISAADRLEA 294 (312)
T ss_dssp SEEEECSBCSSSEECTTSCEEBCHHHHHHTTC-CSEEEESHHHHTSSSHHHH
T ss_pred eEEEcCCcCCCcCCCCcCCcccCHHHHHHhCC-CCEEEEChhhcCCCCHHHH
Confidence 46677777332 146778 667 7999999999987776543
No 370
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=52.99 E-value=33 Score=23.87 Aligned_cols=38 Identities=8% Similarity=0.121 Sum_probs=28.7
Q ss_pred chHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 11 PHSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 11 ~~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
.+..+.+|+. +.|||...+. +.+.+.++++.|..|++.
T Consensus 64 ~~~~~~lr~~-~~pvi~lt~~~~~~~~~~a~~~Ga~dyl~ 102 (259)
T 3luf_A 64 GEAVKVLLER-GLPVVILTADISEDKREAWLEAGVLDYVM 102 (259)
T ss_dssp SHHHHHHHHT-TCCEEEEECC-CHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhC-CCCEEEEEccCCHHHHHHHHHCCCcEEEe
Confidence 3566777764 5787766666 899999999999888764
No 371
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=52.58 E-value=26 Score=21.26 Aligned_cols=37 Identities=16% Similarity=0.301 Sum_probs=26.4
Q ss_pred hHHHHHHH--Hc-CCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRK--AF-KGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~--~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+..+.+|+ .. ..|+|+..+. +.+.+.++++.|..|++
T Consensus 68 ~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~~~l 108 (144)
T 3kht_A 68 EVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGASSVV 108 (144)
T ss_dssp HHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCCEEE
Confidence 45667776 33 3577776666 89999999999966654
No 372
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=51.94 E-value=29 Score=20.70 Aligned_cols=38 Identities=11% Similarity=0.130 Sum_probs=25.9
Q ss_pred hHHHHHHHHc---CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAF---KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~---~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+|+.. ..|+|...+. +.+.+.++++.|..|++.
T Consensus 68 ~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~ 109 (129)
T 3h1g_A 68 DLVKKVRSDSRFKEIPIIMITAEGGKAEVITALKAGVNNYIV 109 (129)
T ss_dssp HHHHHHHTSTTCTTCCEEEEESCCSHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHhcCCCCCCeEEEEeCCCChHHHHHHHHcCccEEEe
Confidence 4566677632 3577766666 888888899988666543
No 373
>1vlp_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, joint center for structural genomics; HET: MSE MES; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.17.2 d.41.2.2
Probab=51.32 E-value=31 Score=27.11 Aligned_cols=46 Identities=9% Similarity=0.070 Sum_probs=35.6
Q ss_pred hHHHHHHHHc-C-------Ce-EEEeCCCCHHHHHHHH----HcCCCcEEecchHHhhC
Q 046574 12 HSLLLMRKAF-K-------GT-FLVAGGYDREDGNKAI----AEGRADLVVYGRFFLAN 57 (104)
Q Consensus 12 ~~~~~ir~~~-~-------~p-vi~~Ggi~~~~ae~~l----~~g~~DlVa~gR~~lan 57 (104)
...+.+|+++ + .. +|.++|++.+.+.++. +.+..|..++|..++.+
T Consensus 314 ~~~~~~r~~l~d~~G~~~~~k~Ii~SdgLd~~~i~~l~~~~~~~~~~d~FGVGT~L~~~ 372 (441)
T 1vlp_A 314 EYTKKISHHYHDVLKLPKFSKIICYSDSLNVEKAITYSHAAKENGMLATFGIGTNFTND 372 (441)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSEEEECSSCCHHHHHHHHHHHHHTTCEEEEEECHHHHSC
T ss_pred HHHHHHHHHHHHHcCCCCCceEEEEeCCCCHHHHHHHHHHHHcCCceEEEEeCchheec
Confidence 4556677777 2 23 9999999999998888 45667899999999974
No 374
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=51.21 E-value=37 Score=20.28 Aligned_cols=38 Identities=16% Similarity=0.167 Sum_probs=27.4
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++.. ..|+|...+. +.+.+.++++.|..|++.
T Consensus 64 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~ 103 (132)
T 3crn_A 64 ELLEKAHKLRPGMKKIMVTGYASLENSVFSLNAGADAYIM 103 (132)
T ss_dssp HHHHHHHHHCTTSEEEEEESCCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhhCCCCcEEEEeccccHHHHHHHHhccchhhcc
Confidence 4566777654 3577777666 888888999999776653
No 375
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=51.02 E-value=31 Score=19.89 Aligned_cols=37 Identities=16% Similarity=0.166 Sum_probs=24.6
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+..+.+++.-..|+|...+. +.+.+.++++.|..|++
T Consensus 62 ~~~~~l~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l 99 (121)
T 1zh2_A 62 EFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYL 99 (121)
T ss_dssp HHHHHHHTTCCCCEEEEESCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHhCCCCcEEEEECCCCHHHHHHHHhcCCCeEE
Confidence 35566664334576666555 78888888888876654
No 376
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=50.97 E-value=11 Score=28.89 Aligned_cols=39 Identities=10% Similarity=0.116 Sum_probs=32.8
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++.+++||++.-.+ ++.+++++++.+.+|+|-+
T Consensus 262 ~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~~ 301 (421)
T 4hnl_A 262 HWLTQLRSQSATPIATGELFNNPMEWQELVKNRQIDFMRA 301 (421)
T ss_dssp GGHHHHHTTCCCCEEECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred HHHHHHHhcCCCCeecCcceehhHHHHHHHhcCCceEEEe
Confidence 34567888889999887777 9999999999999998765
No 377
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=50.82 E-value=40 Score=20.59 Aligned_cols=38 Identities=13% Similarity=0.115 Sum_probs=27.9
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++... .|+|+..+. +.+...++++.|..|++.
T Consensus 78 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~ 117 (152)
T 3eul_A 78 QVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLL 117 (152)
T ss_dssp HHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhcCCCCeEEEEEccCCHHHHHHHHHcCCCEEEe
Confidence 56677777654 577776666 888999999999766654
No 378
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=50.56 E-value=39 Score=20.39 Aligned_cols=38 Identities=13% Similarity=0.065 Sum_probs=27.0
Q ss_pred hHHHHHHHH--c-CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKA--F-KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~--~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+|+. . ..|+|...+. +.+...++++.|..|++.
T Consensus 65 ~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~ga~~~l~ 106 (136)
T 3t6k_A 65 TLCKRVRQHPLTKTLPILMLTAQGDISAKIAGFEAGANDYLA 106 (136)
T ss_dssp HHHHHHHHSGGGTTCCEEEEECTTCHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHcCCCcCCccEEEEecCCCHHHHHHHHhcCcceEEe
Confidence 566777764 2 4577766666 888888999999777643
No 379
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=50.44 E-value=36 Score=19.90 Aligned_cols=37 Identities=11% Similarity=0.036 Sum_probs=26.8
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+..+.+++.. ..|+|...+. +.+.+.++++.|..|++
T Consensus 64 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l 102 (124)
T 1srr_A 64 EILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHF 102 (124)
T ss_dssp HHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCCCEE
T ss_pred HHHHHHHHhCCCCCEEEEEccCchHHHHHHHhcChHhhc
Confidence 4566777764 3577776666 88888889988877765
No 380
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=50.39 E-value=39 Score=20.28 Aligned_cols=38 Identities=18% Similarity=0.354 Sum_probs=27.7
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++... .|+|+..+. +.+.+.++++.|..|++.
T Consensus 64 ~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~ 103 (142)
T 2qxy_A 64 NLIRRIREEFPDTKVAVLSAYVDKDLIINSVKAGAVDYIL 103 (142)
T ss_dssp HHHHHHHHHCTTCEEEEEESCCCHHHHHHHHHHTCSCEEE
T ss_pred HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCcceeEe
Confidence 35566777654 687777666 888889999999776653
No 381
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=50.27 E-value=42 Score=20.61 Aligned_cols=38 Identities=24% Similarity=0.192 Sum_probs=28.2
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcC-CCcEEe
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEG-RADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g-~~DlVa 49 (104)
+.++.+++... .|+|+..+. +.+.+.+++..| ..|++.
T Consensus 75 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~ 115 (153)
T 3hv2_A 75 TLLARIHQQYPSTTRILLTGDPDLKLIAKAINEGEIYRYLS 115 (153)
T ss_dssp HHHHHHHHHCTTSEEEEECCCCCHHHHHHHHHTTCCSEEEC
T ss_pred HHHHHHHhHCCCCeEEEEECCCCHHHHHHHHhCCCcceEEe
Confidence 56677887654 588877777 889999999998 555543
No 382
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=50.11 E-value=23 Score=25.00 Aligned_cols=47 Identities=23% Similarity=0.215 Sum_probs=35.4
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHH
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRR 63 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~r 63 (104)
..+.+++.+...++..|.+ +.++++.+++.| +|+|-.+. .|++....
T Consensus 67 ~i~~l~~~~~~~~igagtvl~~d~~~~A~~aG-Ad~v~~p~---~d~~v~~~ 114 (225)
T 1mxs_A 67 AIQVLREQRPELCVGAGTVLDRSMFAAVEAAG-AQFVVTPG---ITEDILEA 114 (225)
T ss_dssp HHHHHHHHCTTSEEEEECCCSHHHHHHHHHHT-CSSEECSS---CCHHHHHH
T ss_pred HHHHHHHhCcccEEeeCeEeeHHHHHHHHHCC-CCEEEeCC---CCHHHHHH
Confidence 4455777776667777777 999999999999 79998873 46666443
No 383
>2iqt_A Fructose-bisphosphate aldolase class 1; TIM berrel, structural genomics, PSI-2; 2.46A {Porphyromonas gingivalis}
Probab=50.08 E-value=14 Score=27.91 Aligned_cols=35 Identities=20% Similarity=0.479 Sum_probs=26.6
Q ss_pred CCeEEEeCCCCHHHHHHHHHcCCCcEEecchHHhh
Q 046574 22 KGTFLVAGGYDREDGNKAIAEGRADLVVYGRFFLA 56 (104)
Q Consensus 22 ~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR~~la 56 (104)
.+.++++||.|.++|..-|+.-.-=..+|||+|-.
T Consensus 234 pgVvfLSGGqSeeeAt~~L~a~n~l~fSfgRALq~ 268 (296)
T 2iqt_A 234 LRVVALSGGYSREQANELLSRNHGVIASFSRALVE 268 (296)
T ss_dssp EEEEEECTTCCHHHHHHHHTTSTTCEEEESHHHHT
T ss_pred CeeeeCCCCCCHHHHHHHHHhcCCcEEEeHHHhhC
Confidence 34689999999999999887543335778888754
No 384
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=49.45 E-value=41 Score=20.60 Aligned_cols=38 Identities=8% Similarity=-0.030 Sum_probs=26.6
Q ss_pred hHHHHHHHHc---CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAF---KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~---~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+.++.+++.. ..|+|...+. +.+.+.++++.|..|++.
T Consensus 78 ~l~~~l~~~~~~~~~piiils~~~~~~~~~~~~~~ga~~~l~ 119 (149)
T 1i3c_A 78 EVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYLT 119 (149)
T ss_dssp HHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhCcCcCCCeEEEEECCCChHHHHHHHHcCCcEEEE
Confidence 4667777752 3576666555 888899999999766653
No 385
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=49.40 E-value=44 Score=20.68 Aligned_cols=37 Identities=8% Similarity=0.119 Sum_probs=27.2
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+.++.+|+... .|+|+..+. +.+...++++.|..|++
T Consensus 100 ~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l 138 (157)
T 3hzh_A 100 TCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGAKTFI 138 (157)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHcCCCEEE
Confidence 56677887664 577766666 89999999999966554
No 386
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=49.27 E-value=24 Score=26.33 Aligned_cols=39 Identities=13% Similarity=0.078 Sum_probs=32.6
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++..++|+++.=.+ +..++.++++.+.+|+|-+
T Consensus 229 ~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~ 268 (378)
T 4hpn_A 229 DAYARVRAGQPIPVAGGETWHGRYGMWQALSAGAVDILQP 268 (378)
T ss_dssp HHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred hhhHHHHhhCCceeeCCcCccchHhHHHHHHcCCCCEEee
Confidence 35567889999998877666 8999999999999998865
No 387
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=49.15 E-value=29 Score=26.26 Aligned_cols=38 Identities=11% Similarity=0.035 Sum_probs=32.2
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
....+++..++||++.=.+ +..++.++++.|.+|+|-+
T Consensus 252 ~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~ 290 (388)
T 4h83_A 252 SMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNF 290 (388)
T ss_dssp HHHHHHHHSSSCEEECTTCSSHHHHHHHHHHTCCSEECC
T ss_pred HHHHHHhhcCCCccCCccccChHhHHHHHHcCCCCeEee
Confidence 4567888889999887667 9999999999999998754
No 388
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=48.98 E-value=21 Score=26.89 Aligned_cols=39 Identities=8% Similarity=-0.024 Sum_probs=32.3
Q ss_pred CcchHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 9 ECPHSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 9 ~~~~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+.+...+.|++.+++|||+=..+ ...+|+.+.+.| +|+|
T Consensus 55 ~dp~~I~~I~~aVsIPVm~k~righ~~EAqilea~G-aD~I 94 (291)
T 3o07_A 55 SDPKMIKDIMNSVSIPVMAKVRIGHFVEAQIIEALE-VDYI 94 (291)
T ss_dssp CCHHHHHHHHTTCSSCEEEEEETTCHHHHHHHHHTT-CSEE
T ss_pred CCHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHcC-CCEE
Confidence 34677888999999999999888 788887777777 7988
No 389
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=48.47 E-value=38 Score=19.60 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=26.0
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+..+.+++... .|+|...+. +.+.+.++++.|..|++
T Consensus 64 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l 102 (120)
T 1tmy_A 64 DAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFI 102 (120)
T ss_dssp HHHHHHHHHCTTCCEEEEECTTCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHhhCCCCeEEEEeCCCCHHHHHHHHHhCcceeE
Confidence 45666776543 577766666 88888889988876654
No 390
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=48.41 E-value=30 Score=25.63 Aligned_cols=39 Identities=5% Similarity=0.050 Sum_probs=32.5
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++..++|+++.=.+ +..++.++++.+.+|+|-+
T Consensus 229 ~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~i~~ 268 (370)
T 2chr_A 229 QALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSL 268 (370)
T ss_dssp HHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCSEECC
T ss_pred hhhhHHhhhccCCccCCccCCCHHHHHHHHHcCCCcEEEe
Confidence 45567888899998876666 9999999999999998755
No 391
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=47.94 E-value=41 Score=19.82 Aligned_cols=37 Identities=8% Similarity=-0.025 Sum_probs=26.1
Q ss_pred hHHHHHHHHc---CCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAF---KGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~---~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+..+.+++.. ..|+|+..+. +.+...++++.|..+++
T Consensus 72 ~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l 112 (140)
T 1k68_A 72 EVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYI 112 (140)
T ss_dssp HHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHcCcccccccEEEEecCCcHHHHHHHHHhchhhee
Confidence 4667777753 4576666555 88888999998866654
No 392
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=47.43 E-value=36 Score=25.93 Aligned_cols=39 Identities=13% Similarity=0.084 Sum_probs=32.3
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++.+++||++.=.+ +..++.++++.+.+|+|-.
T Consensus 273 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~ 312 (412)
T 4h1z_A 273 DGLARVAASVSTAIAVGEEWRTVHDMVPRVARRALAIVQP 312 (412)
T ss_dssp HHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHhhcCCccccCCcccchHhHHHHHHcCCCCEEEe
Confidence 35567899999998876666 9999999999999998753
No 393
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=46.48 E-value=41 Score=19.42 Aligned_cols=38 Identities=18% Similarity=0.149 Sum_probs=26.5
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++.. ..|+|...+. +.+.+.++++.|..|++.
T Consensus 61 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~ 100 (121)
T 2pl1_A 61 SLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVT 100 (121)
T ss_dssp HHHHHHHHTTCCSCEEEEESCCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhcCCCCCEEEEecCCCHHHHHHHHHcCccceEE
Confidence 4566677654 3577766665 888888999999767653
No 394
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=46.21 E-value=24 Score=26.80 Aligned_cols=44 Identities=20% Similarity=0.197 Sum_probs=30.5
Q ss_pred HHHHHHc---CCeEE-EeCCCCHH----HHHHHHHcC-CCcEEecchHHhhCC
Q 046574 15 LLMRKAF---KGTFL-VAGGYDRE----DGNKAIAEG-RADLVVYGRFFLANP 58 (104)
Q Consensus 15 ~~ir~~~---~~pvi-~~Ggi~~~----~ae~~l~~g-~~DlVa~gR~~lanP 58 (104)
+.|++.+ ..|+| ++||.+.+ ..+.+++.| .+--|++||....+.
T Consensus 235 ~~f~~~~~a~~~P~v~lsgG~~~~~fl~~v~~A~~aGa~f~Gv~~GRnvwq~~ 287 (332)
T 3iv3_A 235 QAFREQEASTDLPYIYLSAGVSAELFQETLVFAHKAGAKFNGVLCGRATWAGS 287 (332)
T ss_dssp HHHHHHHHTCSSCEEEECTTCCHHHHHHHHHHHHHHTCCCCEEEECHHHHTTH
T ss_pred HHHHHHHhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCCcceEEeeHHHHHhh
Confidence 4466543 56854 78999644 446667778 238999999998874
No 395
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=45.99 E-value=47 Score=25.37 Aligned_cols=52 Identities=17% Similarity=0.297 Sum_probs=31.2
Q ss_pred hHHHHHHHHcCCeEEEeCCC-----CHHHHHHHH--HcCCCcEEecchHHhhCCcHHHH
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-----DREDGNKAI--AEGRADLVVYGRFFLANPDLPRR 63 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-----~~~~ae~~l--~~g~~DlVa~gR~~lanPdl~~r 63 (104)
+.+..+|+....-++++=|| +........ .++..|+|.+||+.+.-+|....
T Consensus 268 ~e~~~iR~~~~~~~iLtPGIGaqgGdq~rv~tp~~a~~~gadiIvVGR~I~~A~dp~~A 326 (352)
T 2fds_A 268 EEMKIIRNKFPDSYILSPGIGAQNGDLYKTLKNGYNKDYEKLLINVGRAITKSPNPKKS 326 (352)
T ss_dssp HHHHHHHHHSTTCCEEECCC-----CHHHHHHHHCCSSGGGEEEEECHHHHTSSCHHHH
T ss_pred HHHHHHHHhCCCCEEEcCccccccCcHHHhhCHHhHhhcCceEEEECHHHccCCCHHHH
Confidence 44556888775555655555 122211222 12347999999999988875443
No 396
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=45.73 E-value=33 Score=23.60 Aligned_cols=38 Identities=16% Similarity=0.197 Sum_probs=27.8
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+.++.+++.-..|||...+. +.+.+.++++.|..|++.
T Consensus 98 ~l~~~lr~~~~~~iI~lt~~~~~~~~~~a~~~Ga~~yl~ 136 (249)
T 3q9s_A 98 DVVQRLRKNSALPIIVLTARDTVEEKVRLLGLGADDYLI 136 (249)
T ss_dssp HHHHHHHTTCCCCEEEEESCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHcCCCCCEEEEECCCCHHHHHHHHHCCCcEEEE
Confidence 45566776445677776666 899999999999777654
No 397
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=45.72 E-value=48 Score=19.99 Aligned_cols=38 Identities=13% Similarity=0.145 Sum_probs=27.3
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++.. ..|+|...+. +.+.+.++++.|..|++.
T Consensus 65 ~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~ 104 (137)
T 3cfy_A 65 DVLDWINQNDIPTSVIIATAHGSVDLAVNLIQKGAEDFLE 104 (137)
T ss_dssp HHHHHHHHTTCCCEEEEEESSCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhcCCCCCEEEEEecCcHHHHHHHHHCCccEEEe
Confidence 4566777754 3577766666 888889999999766653
No 398
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=45.66 E-value=31 Score=20.45 Aligned_cols=40 Identities=20% Similarity=0.276 Sum_probs=26.7
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEEecchH
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLVVYGRF 53 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~ 53 (104)
+..+.+|+... .|+|+..+. +.+...++++.|..|++. +|
T Consensus 63 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~--kp 104 (134)
T 3f6c_A 63 QVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVS--KK 104 (134)
T ss_dssp HHHHHHHHTTCCSEEEEEECC---CTHHHHHHTTCSEEEE--GG
T ss_pred HHHHHHHhcCCCCeEEEEeCCCChHHHHHHHHhCCCEEEe--CC
Confidence 56677877654 577776666 777888899999666544 55
No 399
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=45.64 E-value=50 Score=20.17 Aligned_cols=38 Identities=16% Similarity=0.046 Sum_probs=28.0
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+.++.+++... .|+|+..+. +.+...+++..|..|++.
T Consensus 68 ~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~ 107 (153)
T 3cz5_A 68 EATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGYVT 107 (153)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHCCCcEEEe
Confidence 56677887754 577776666 888899999999766654
No 400
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=45.42 E-value=50 Score=20.13 Aligned_cols=37 Identities=11% Similarity=0.188 Sum_probs=26.3
Q ss_pred hHHHHHHH--Hc-CCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRK--AF-KGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~--~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+.++.+|+ .. +.|+|+..+. +.+.+.++++.|..+++
T Consensus 76 ~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l 116 (152)
T 3heb_A 76 DILKLVKENPHTRRSPVVILTTTDDQREIQRCYDLGANVYI 116 (152)
T ss_dssp HHHHHHHHSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHhcccccCCCEEEEecCCCHHHHHHHHHCCCcEEE
Confidence 56777887 33 3576666555 88888999999966654
No 401
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=45.28 E-value=17 Score=26.62 Aligned_cols=27 Identities=22% Similarity=0.455 Sum_probs=20.4
Q ss_pred HHHHHHHcCCCcEEecchHHhh-CCcHHH
Q 046574 35 DGNKAIAEGRADLVVYGRFFLA-NPDLPR 62 (104)
Q Consensus 35 ~ae~~l~~g~~DlVa~gR~~la-nPdl~~ 62 (104)
.-.++++.| +|+|.+|||... .+|=..
T Consensus 219 TP~~Ai~~G-aD~iVVGRpI~~~a~dP~~ 246 (267)
T 3gdm_A 219 TVDDVVSTG-SDIIIVGRGLFAKGRDAKV 246 (267)
T ss_dssp EHHHHHHTT-CSEEEECGGGTSTTCCHHH
T ss_pred CHHHHHHcC-CCEEEEChhhccCCCCHHH
Confidence 345667778 799999999998 665443
No 402
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=44.49 E-value=53 Score=21.60 Aligned_cols=52 Identities=17% Similarity=0.236 Sum_probs=34.0
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHh
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFE 65 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~ 65 (104)
+..+.+++.. ..|+|...+. +.+.+.++++.|..|++ .+|++.-.++...+.
T Consensus 57 ~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~~l--~Kp~~~~~~L~~~i~ 110 (223)
T 2hqr_A 57 SFVSRIKEKHSSIVVLVSSDNPTSEEEVHAFEQGADDYI--AKPYRSIKALVARIE 110 (223)
T ss_dssp HHHHHHHHHCTTSEEEEEESSCCHHHHHHHHHHTCSEEE--ETTCSCTHHHHHHHH
T ss_pred HHHHHHHhCCCCCcEEEEECCCCHHHHHHHHHcCCCEEE--ECCCCCHHHHHHHHH
Confidence 4667787774 4677776666 88999999999976664 345433334444443
No 403
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=44.46 E-value=36 Score=20.25 Aligned_cols=38 Identities=24% Similarity=0.405 Sum_probs=27.7
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+.++.+++... .|+|+..+. +.+.+.++++.|..+++.
T Consensus 69 ~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~ 108 (140)
T 2qr3_A 69 FWLHEIKRQYRDLPVVLFTAYADIDLAVRGIKEGASDFVV 108 (140)
T ss_dssp HHHHHHHHHCTTCCEEEEEEGGGHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhhCcCCCEEEEECCCCHHHHHHHHHcCchheee
Confidence 46677877653 577777666 888888999999766654
No 404
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=44.35 E-value=23 Score=27.63 Aligned_cols=39 Identities=8% Similarity=-0.020 Sum_probs=32.1
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++.+++||.+.-.+ +..++.++++.+.+|+|.+
T Consensus 276 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~ 315 (445)
T 3vdg_A 276 DGMAEVAAQAPMPLATNMCVVAFDQLPAAVAKNSVQVVLS 315 (445)
T ss_dssp HHHHHHHHHCSSCEEESSSCCSGGGHHHHHHHTCCSEEEE
T ss_pred HHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHcCCCCEEee
Confidence 45567888889998776566 8999999999999998776
No 405
>3os4_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel; HET: MSE; 1.60A {Yersinia pestis}
Probab=44.28 E-value=42 Score=26.12 Aligned_cols=48 Identities=6% Similarity=-0.130 Sum_probs=35.1
Q ss_pred hHHHHHHHHc---C-----CeEEEeCCCCHHHHHHHHH--cC-CCcEEecchHHhhCCc
Q 046574 12 HSLLLMRKAF---K-----GTFLVAGGYDREDGNKAIA--EG-RADLVVYGRFFLANPD 59 (104)
Q Consensus 12 ~~~~~ir~~~---~-----~pvi~~Ggi~~~~ae~~l~--~g-~~DlVa~gR~~lanPd 59 (104)
...+.+|+++ + ..+|.++|++.+.+.++.+ +| ..|..++|..++.+.+
T Consensus 290 ~~~~k~r~~ld~~G~~p~~~~Ii~SdgLde~~i~~l~~~~~~~~~d~fGVGT~L~~~~~ 348 (407)
T 3os4_A 290 EWGEKAIAHYEKLGIDPMKKVLVFSDNLDLEKALFLYRHFYQRIKLVFGIGTRLTCDIP 348 (407)
T ss_dssp HHHHHHHHHHHHTTCCGGGSEEEECSSCCHHHHHHHHHHHTTTSEEEEEECHHHHSCCT
T ss_pred HHHHHHHHHHHHCCcCcCceEEEECCCCCHHHHHHHHHHhcCCCCcEEeechheeeCCC
Confidence 4555666665 2 2588889999999988865 44 4579999999988744
No 406
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=44.04 E-value=47 Score=20.03 Aligned_cols=38 Identities=11% Similarity=0.175 Sum_probs=27.0
Q ss_pred hHHHHHHH--Hc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRK--AF-KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~--~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+.++.+++ .. ..|+|+..+. +.+...++++.|..|++.
T Consensus 69 ~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~ 110 (147)
T 2zay_A 69 DLFNSLKKNPQTASIPVIALSGRATAKEEAQLLDMGFIDFIA 110 (147)
T ss_dssp HHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHhCCCCEEEe
Confidence 46667776 33 4577777666 888888999999766653
No 407
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=43.93 E-value=18 Score=26.46 Aligned_cols=41 Identities=22% Similarity=0.258 Sum_probs=25.9
Q ss_pred eEEEeCCCCHHHHH---HHHHcCCCcEEecchHH---hhCCcHHHHH
Q 046574 24 TFLVAGGYDREDGN---KAIAEGRADLVVYGRFF---LANPDLPRRF 64 (104)
Q Consensus 24 pvi~~Ggi~~~~ae---~~l~~g~~DlVa~gR~~---lanPdl~~ri 64 (104)
|.|++|.-+.+... ..+.++.+|+|-+|-|| ++|.-.+++.
T Consensus 22 ~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a 68 (267)
T 3vnd_A 22 PFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGA 68 (267)
T ss_dssp EEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHH
Confidence 67777766555432 23334558999999888 5555555553
No 408
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=43.58 E-value=25 Score=24.52 Aligned_cols=22 Identities=32% Similarity=0.161 Sum_probs=14.9
Q ss_pred eCCC-CHHHHHHHHHcCCCcEEec
Q 046574 28 AGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 28 ~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
..|+ ++++|+.+.+.| +|+++|
T Consensus 5 ICGit~~eda~~a~~~G-aD~iGf 27 (203)
T 1v5x_A 5 ICGITRLEDALLAEALG-AFALGF 27 (203)
T ss_dssp ECCCCCHHHHHHHHHHT-CSEEEE
T ss_pred EcCCCcHHHHHHHHHcC-CCEEEE
Confidence 3456 777777777766 677666
No 409
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=43.55 E-value=25 Score=24.58 Aligned_cols=40 Identities=25% Similarity=0.295 Sum_probs=24.1
Q ss_pred EEeCCC-CHHHHHHHHHcCCCcEEecc----hHHhhCCcHHHHHhh
Q 046574 26 LVAGGY-DREDGNKAIAEGRADLVVYG----RFFLANPDLPRRFEF 66 (104)
Q Consensus 26 i~~Ggi-~~~~ae~~l~~g~~DlVa~g----R~~lanPdl~~ri~~ 66 (104)
+-..|+ ++++|+.+.+.| +|+++|= .+--.+|+-+..+..
T Consensus 4 vKICGit~~eda~~a~~~G-aD~iGfif~~~SpR~V~~~~a~~i~~ 48 (205)
T 1nsj_A 4 VKICGITNLEDALFSVESG-ADAVGFVFYPKSKRYISPEDARRISV 48 (205)
T ss_dssp EEECCCCSHHHHHHHHHHT-CSEEEEECCTTCTTBCCHHHHHHHHH
T ss_pred EEECCCCcHHHHHHHHHcC-CCEEEEEecCCCCCcCCHHHHHHHHH
Confidence 344566 788888888777 6877763 222234455555543
No 410
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=43.40 E-value=21 Score=27.81 Aligned_cols=39 Identities=5% Similarity=0.009 Sum_probs=31.7
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++.+++||.+.-.+ +..++.++++.+.+|+|.+
T Consensus 274 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~ 313 (445)
T 3va8_A 274 EGMAAVAKEASMPLATNMAVVAFDHLPPSILQDAVQVILS 313 (445)
T ss_dssp HHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEe
Confidence 34567888888898776666 8999999999999998776
No 411
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=42.88 E-value=57 Score=21.55 Aligned_cols=51 Identities=14% Similarity=0.204 Sum_probs=34.2
Q ss_pred chHHHHHHHH-----cCCeEEEeCCC--CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhh
Q 046574 11 PHSLLLMRKA-----FKGTFLVAGGY--DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEF 66 (104)
Q Consensus 11 ~~~~~~ir~~-----~~~pvi~~Ggi--~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~ 66 (104)
.+.++.||+. -..|+|+..+. +.+.+.++++.|..|++. +|+- +|...+..
T Consensus 135 ~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~--KP~~---~L~~~i~~ 192 (206)
T 3mm4_A 135 YEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLD--KSLN---QLANVIRE 192 (206)
T ss_dssp HHHHHHHHHHHHTTTCCCCEEEEESSCCCHHHHHHHHHHTCSEEEE--TTCT---THHHHHHH
T ss_pred HHHHHHHHhhhhhcCCCCcEEEEECCCCcHHHHHHHHhCCCCEEEc--CcHH---HHHHHHHH
Confidence 3567778875 34676666554 778889999999766664 4543 67666544
No 412
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=42.59 E-value=52 Score=19.51 Aligned_cols=37 Identities=11% Similarity=0.098 Sum_probs=26.0
Q ss_pred hHHHHHHH--Hc-CCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRK--AF-KGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~--~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+.++.+++ .. ..|+|+..+. +.+...++++.|..|++
T Consensus 71 ~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l 111 (143)
T 3cnb_A 71 SICHRIKSTPATANIIVIAMTGALTDDNVSRIVALGAETCF 111 (143)
T ss_dssp HHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHhcCCcEEE
Confidence 45667777 33 3577766665 88888899999966654
No 413
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=42.22 E-value=30 Score=28.21 Aligned_cols=45 Identities=9% Similarity=0.151 Sum_probs=35.9
Q ss_pred hHHHHHHHHcCCeEEEeCCC---------CHHHHHHHHHcCCCcEEecchHHhh
Q 046574 12 HSLLLMRKAFKGTFLVAGGY---------DREDGNKAIAEGRADLVVYGRFFLA 56 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi---------~~~~ae~~l~~g~~DlVa~gR~~la 56 (104)
..+..+.+.+++||++|-++ ||++|-.+......|.+.+|-.++.
T Consensus 518 ~ll~~f~~~TG~pvllNTSfN~~GePiV~tp~dA~~~f~~~~lD~Lv~~~~lv~ 571 (576)
T 3ven_A 518 RMLTELGDLVGDPVCLNTSFNDRGEPIVSSPADALLTFSRLPIDALAVGPYLVT 571 (576)
T ss_dssp HHHHHHHHHHSSCEEEEEESSCTTSCCCCSHHHHHHHHHHTTCSEEEETTEEEE
T ss_pred HHHHHHHHHhCCeEEEECCCCCCCCCCCCCHHHHHHHHHhCCCCEEEECCEEEE
Confidence 35667888889999998653 6999988888777999999876654
No 414
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=41.70 E-value=39 Score=20.20 Aligned_cols=38 Identities=11% Similarity=0.058 Sum_probs=26.2
Q ss_pred hHHHHHHHHc---CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAF---KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~---~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++.. ..|+|+..+. +.+.+.++++.|..+++.
T Consensus 79 ~~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~ 120 (149)
T 1k66_A 79 EVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIV 120 (149)
T ss_dssp HHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEe
Confidence 4556676653 3577666665 888899999999666543
No 415
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=41.57 E-value=48 Score=20.31 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=27.9
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++.. ..|+|+..+. +.+.+..++..|..|++.
T Consensus 64 ~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~ 103 (155)
T 1qkk_A 64 ALFRKILALDPDLPMILVTGHGDIPMAVQAIQDGAYDFIA 103 (155)
T ss_dssp HHHHHHHHHCTTSCEEEEECGGGHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhhCCCCCEEEEECCCChHHHHHHHhcCCCeEEe
Confidence 4567777765 3587777766 888888999999766654
No 416
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=40.94 E-value=47 Score=25.15 Aligned_cols=38 Identities=18% Similarity=0.141 Sum_probs=31.0
Q ss_pred hHHHHHHHHcCCeEEEeC-----------------------CCCHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAG-----------------------GYDREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~G-----------------------gi~~~~ae~~l~~g~~DlVa~ 50 (104)
+.++.|++.+++|+..-| |++.++.++++..| +--|-+
T Consensus 194 ~~L~~I~~~~~vpLVlHGgSsvp~~~~~~~~~~gg~~~~~~Gvp~e~i~~ai~~G-V~KiNi 254 (323)
T 2isw_A 194 DRVKTISDLTGIPLVMHGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAIGEG-VCKINV 254 (323)
T ss_dssp HHHHHHHHHHCSCEEECSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTT-EEEEEE
T ss_pred HHHHHHHHHhCCCeEEECCCCCCHHHHHHHHHhccccccCCCCCHHHHHHHHHCC-CeEEEE
Confidence 567789999999999999 78899999999988 344444
No 417
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=40.48 E-value=48 Score=19.38 Aligned_cols=37 Identities=27% Similarity=0.293 Sum_probs=24.3
Q ss_pred hHHHHHHHH---cCCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKA---FKGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~---~~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+..+.+++. -..|+|...+. +.+.+.++++.|..+++
T Consensus 68 ~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l 108 (129)
T 1p6q_A 68 GLLQAVRANPATKKAAFIILTAQGDRALVQKAAALGANNVL 108 (129)
T ss_dssp HHHHHHTTCTTSTTCEEEECCSCCCHHHHHHHHHHTCSCEE
T ss_pred HHHHHHhcCccccCCCEEEEeCCCCHHHHHHHHHcCCCEEE
Confidence 345566653 23577776666 77888888888866654
No 418
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=40.11 E-value=56 Score=19.21 Aligned_cols=37 Identities=16% Similarity=0.324 Sum_probs=25.4
Q ss_pred hHHHHHHHHc--CCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~--~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+..+.+++.. ..|+|...+. +.+.+.++++.|..|++
T Consensus 65 ~~~~~l~~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l 104 (130)
T 1dz3_A 65 AVLERIRAGFEHQPNVIMLTAFGQEDVTKKAVELGASYFI 104 (130)
T ss_dssp HHHHHHHHHCSSCCEEEEEEETTCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHhcCCCCCcEEEEecCCCHHHHHHHHHcCCCEEE
Confidence 4567777752 3466666555 78888889998866654
No 419
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=39.67 E-value=56 Score=24.71 Aligned_cols=39 Identities=15% Similarity=0.042 Sum_probs=32.1
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++..++||++.=.+ +..+..++++.+.+|+|.+
T Consensus 231 ~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~ 270 (389)
T 3s5s_A 231 DGMKEVTRRAGVDVAADESAASAEDVLRVAAERAATVVNI 270 (389)
T ss_dssp HHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEe
Confidence 35567888888898886666 9999999999999998855
No 420
>1ybe_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.50A {Agrobacterium tumefaciens} SCOP: c.1.17.2 d.41.2.2
Probab=39.55 E-value=56 Score=25.67 Aligned_cols=46 Identities=11% Similarity=0.076 Sum_probs=34.3
Q ss_pred hHHHHHHHHc---C-----CeEEEeCCCCHHHHHHHHH--cC-CCcEEecchHHhhC
Q 046574 12 HSLLLMRKAF---K-----GTFLVAGGYDREDGNKAIA--EG-RADLVVYGRFFLAN 57 (104)
Q Consensus 12 ~~~~~ir~~~---~-----~pvi~~Ggi~~~~ae~~l~--~g-~~DlVa~gR~~lan 57 (104)
...+.+++++ + ..+|.++|++.+.+.++.+ +| ..|..++|..++.+
T Consensus 320 ~~~~~~r~~ld~~G~~p~~~~Ii~SdgLd~~~i~~l~~~~~g~~~d~FGVGT~L~~d 376 (449)
T 1ybe_A 320 EGGEKIIEWWRKMGRDPRTKMLIFSDGLDVDAIVDTYRHFEGRVRMSFGWGTNLTND 376 (449)
T ss_dssp HHHHHHHHHHHHTTCCGGGSEEEECTTCCHHHHHHHHHHHTTTSEEEEEECHHHHCC
T ss_pred HHHHHHHHHHHHcCCCcCceEEEEeCCCCHHHHHHHHHHhcCCCceEEEeChhhccC
Confidence 3445566655 2 3589999999999999886 44 45889999999874
No 421
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=39.32 E-value=37 Score=20.35 Aligned_cols=37 Identities=11% Similarity=-0.079 Sum_probs=24.8
Q ss_pred hHHHHHHHHc---CCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAF---KGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~---~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+..+.+++.. ..|+|+..+. +.+.+.++++.|..|++
T Consensus 76 ~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l 116 (143)
T 2qvg_A 76 EFLKELRDDSSFTDIEVFVLTAAYTSKDKLAFESLNIRGHL 116 (143)
T ss_dssp HHHHHHTTSGGGTTCEEEEEESCCCHHHHHHHTTTTCCEEE
T ss_pred HHHHHHHcCccccCCcEEEEeCCCCHHHHHHHHhcCCCeEE
Confidence 4556666653 4576666555 78888888888865554
No 422
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=39.24 E-value=58 Score=20.97 Aligned_cols=37 Identities=11% Similarity=0.048 Sum_probs=26.2
Q ss_pred HHHHHHHH-cCCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 13 SLLLMRKA-FKGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 13 ~~~~ir~~-~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
..+.+++. -..|+|...+. +.+.+.++++.|..|++.
T Consensus 69 l~~~~~~~~~~~~ii~lt~~~~~~~~~~a~~~ga~~~l~ 107 (196)
T 1qo0_D 69 IAALLAAGTPRTTLVALVEYESPAVLSQIIELECHGVIT 107 (196)
T ss_dssp HHHHHHHSCTTCEEEEEECCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHhccCCCCCEEEEEcCCChHHHHHHHHcCCCeeEe
Confidence 34455554 35687777666 889999999999777654
No 423
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=39.04 E-value=26 Score=25.09 Aligned_cols=38 Identities=21% Similarity=0.230 Sum_probs=26.6
Q ss_pred HHHHHHHcC-CeEEEeCCCCHHHHHHHHHcCCCcEEecch
Q 046574 14 LLLMRKAFK-GTFLVAGGYDREDGNKAIAEGRADLVVYGR 52 (104)
Q Consensus 14 ~~~ir~~~~-~pvi~~Ggi~~~~ae~~l~~g~~DlVa~gR 52 (104)
...+|+..+ ..+|.....|+++++++.+.| +|+|++|-
T Consensus 125 ~~~~r~~~~~~~~iG~S~ht~~Ea~~A~~~G-aDyI~vgp 163 (243)
T 3o63_A 125 VNVARQILAPDTLIGRSTHDPDQVAAAAAGD-ADYFCVGP 163 (243)
T ss_dssp HHHHHHHSCTTCEEEEEECSHHHHHHHHHSS-CSEEEECC
T ss_pred HHHHHHhhCCCCEEEEeCCCHHHHHHHhhCC-CCEEEEcC
Confidence 345666654 345544445899999998887 89999974
No 424
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=38.98 E-value=61 Score=25.08 Aligned_cols=38 Identities=8% Similarity=-0.028 Sum_probs=31.4
Q ss_pred HHHHHHHH---cCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 13 SLLLMRKA---FKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 13 ~~~~ir~~---~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
....+++. .++||++.-.+ +..++.++++.+.+|+|.+
T Consensus 287 ~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~div~~ 328 (441)
T 4a35_A 287 GHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQI 328 (441)
T ss_dssp HHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCCCEEEE
Confidence 44567776 67898887777 9999999999999998876
No 425
>3n5l_A Binding protein component of ABC phosphonate TRAN; structural genomics, joint center for structural genomics; HET: UNL; 1.97A {Pseudomonas aeruginosa}
Probab=38.84 E-value=66 Score=23.05 Aligned_cols=39 Identities=15% Similarity=-0.004 Sum_probs=29.7
Q ss_pred HHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecc
Q 046574 13 SLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~g 51 (104)
.++.+.+..+.+|-..-..+.+...++|.+|.+|++.+|
T Consensus 26 l~~~l~k~lG~~ve~~~~~~~~~~i~al~~G~vDi~~~~ 64 (310)
T 3n5l_A 26 FLKDMSQQTGYQVKAFFAPDYAGIIQGMRFDKVDIAWYG 64 (310)
T ss_dssp HHHHHHHHHSSEEEEECCSSHHHHHHHHHTTSCSEEECC
T ss_pred HHHHHHHHhCCCEEEEeCCCHHHHHHHHHcCCCCEEEEC
Confidence 445577777777766544477888899999999999877
No 426
>3p7i_A PHND, subunit of alkylphosphonate ABC transporter; phosphonate binding protein, transport protein; 1.71A {Escherichia coli UTI89} PDB: 3qk6_A 3quj_A* 3s4u_A
Probab=38.79 E-value=62 Score=23.52 Aligned_cols=39 Identities=18% Similarity=0.055 Sum_probs=29.5
Q ss_pred HHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecc
Q 046574 13 SLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~g 51 (104)
.++.|.+..+.+|-..-..+.+...+.|.+|.+|++.+|
T Consensus 36 l~~~L~k~lG~~ve~~~~~~~~~~i~aL~~G~vDia~~~ 74 (321)
T 3p7i_A 36 FLQDMEKKLGVKVNAFFAPDYAGIIQGMRFNKVDIAWYG 74 (321)
T ss_dssp HHHHHHHHHTSCEEEECCSSHHHHHHHHHTTSCSEEECC
T ss_pred HHHHHHHHHCCCEEEEecCCHHHHHHHHHcCCCcEEEEC
Confidence 345567777777766544577888899999999999876
No 427
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=38.48 E-value=59 Score=18.95 Aligned_cols=37 Identities=19% Similarity=0.162 Sum_probs=25.0
Q ss_pred hHHHHHHHH--c-CCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKA--F-KGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~--~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+..+.+++. . ..|+|...+. +.+.+.++++.|..|++
T Consensus 66 ~l~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l 106 (128)
T 1jbe_A 66 ELLKTIRAXXAMSALPVLMVTAEAKKENIIAAAQAGASGYV 106 (128)
T ss_dssp HHHHHHHC--CCTTCCEEEEESSCCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHhhcccCCCcEEEEecCccHHHHHHHHHhCcCcee
Confidence 456667763 2 3477666555 88888899998876654
No 428
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=38.44 E-value=67 Score=19.56 Aligned_cols=37 Identities=19% Similarity=0.242 Sum_probs=26.3
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcC-CCcEE
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEG-RADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g-~~DlV 48 (104)
+.++.+++... .|+|+..+. +.+.+.+++..| ..+++
T Consensus 65 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l 104 (151)
T 3kcn_A 65 EVIQKARLISPNSVYLMLTGNQDLTTAMEAVNEGQVFRFL 104 (151)
T ss_dssp HHHHHHHHHCSSCEEEEEECGGGHHHHHHHHHHTCCSEEE
T ss_pred HHHHHHHhcCCCcEEEEEECCCCHHHHHHHHHcCCeeEEE
Confidence 46677777654 577766666 888888999888 44554
No 429
>3u42_A 50S ribosomal protein L1; rossmann fold, rRNA binding, RNA binding; 1.35A {Thermus thermophilus} PDB: 3u56_A 3u4m_A 1eg0_N 1vsp_A 2hgj_C 2hgq_C 2hgu_C 1vsa_A 4f9t_A* 4abs_C 3zvp_C 1zho_A 1ml5_c* 1yl3_C 1giy_C 3umy_A 2hw8_A 2j01_C 2j03_C 2om7_K* ...
Probab=37.79 E-value=33 Score=24.63 Aligned_cols=27 Identities=22% Similarity=0.100 Sum_probs=19.2
Q ss_pred HHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCC
Q 046574 34 EDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNA 68 (104)
Q Consensus 34 ~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~ 68 (104)
+.++++.+.| +|+|+.- |+.++++.|+
T Consensus 82 ~~~~eAk~aG-Ad~vG~~-------dLi~kIk~g~ 108 (229)
T 3u42_A 82 EKIKEAEEAG-ADYVGGE-------EIIQKILDGW 108 (229)
T ss_dssp HHHHHHHHTT-CSEEECT-------HHHHHHHTTC
T ss_pred HhHHHHHhcC-CceeCcH-------HHHHHHhcCC
Confidence 7788888888 6887653 6666666665
No 430
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=37.67 E-value=59 Score=19.08 Aligned_cols=37 Identities=24% Similarity=0.413 Sum_probs=24.2
Q ss_pred hHHHHHHHHc--C-CeEEEeCCCCHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAF--K-GTFLVAGGYDREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~--~-~pvi~~Ggi~~~~ae~~l~~g~~DlV 48 (104)
+.++.+|+.. . .+++...+.+.+...++++.|..|++
T Consensus 67 ~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~l 106 (132)
T 3lte_A 67 DVIRSLRQNKVANQPKILVVSGLDKAKLQQAVTEGADDYL 106 (132)
T ss_dssp HHHHHHHTTTCSSCCEEEEECCSCSHHHHHHHHHTCCEEE
T ss_pred HHHHHHHhcCccCCCeEEEEeCCChHHHHHHHHhChHHHh
Confidence 4566677654 2 36777777655577788888865554
No 431
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=37.22 E-value=46 Score=24.69 Aligned_cols=41 Identities=20% Similarity=0.178 Sum_probs=32.7
Q ss_pred hHHHHHHHHcCCeEEEeCCC--CHHHHHHHHHcCCCcEEecchH
Q 046574 12 HSLLLMRKAFKGTFLVAGGY--DREDGNKAIAEGRADLVVYGRF 53 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi--~~~~ae~~l~~g~~DlVa~gR~ 53 (104)
+.++.|++.+++|+.+-||- +.++.+++++.| +--|-++..
T Consensus 196 ~~L~~I~~~v~vpLVlHGgSG~~~e~i~~ai~~G-v~KiNi~Td 238 (288)
T 3q94_A 196 AEMEQVRDFTGVPLVLHGGTGIPTADIEKAISLG-TSKINVNTE 238 (288)
T ss_dssp HHHHHHHHHHCSCEEECCCTTCCHHHHHHHHHTT-EEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHHcC-CeEEEEChH
Confidence 56778999999999999887 788899999988 455555443
No 432
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=37.07 E-value=71 Score=24.73 Aligned_cols=39 Identities=8% Similarity=-0.014 Sum_probs=33.0
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecc
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~g 51 (104)
+.+..|++.+++||++---+++..|..+++.| +|.+-+=
T Consensus 74 ~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G-~dklRIN 112 (366)
T 3noy_A 74 EALEEIVKKSPMPVIADIHFAPSYAFLSMEKG-VHGIRIN 112 (366)
T ss_dssp HHHHHHHHHCSSCEEEECCSCHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhC-CCeEEEC
Confidence 45667888899999998888999999999988 7888763
No 433
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=36.60 E-value=51 Score=25.62 Aligned_cols=38 Identities=13% Similarity=-0.011 Sum_probs=31.1
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+....+++..++|+.+.=.+ +..+..++++.+.+|++-
T Consensus 291 e~~a~lr~~~~iPIa~gE~~~~~~~~~~~i~~~avdi~~ 329 (464)
T 4g8t_A 291 EIMAEFRRATGLPTATNMIATDWRQMGHTISLQSVDIPL 329 (464)
T ss_dssp HHHHHHHHHHCCCEEESSSSCSHHHHHHHHHHTCCSEEB
T ss_pred HHHHhhhccCCCCccccccccchhhHHHHHHhhCCCEEe
Confidence 34567888899998886666 999999999999999654
No 434
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=36.17 E-value=71 Score=23.42 Aligned_cols=39 Identities=10% Similarity=0.211 Sum_probs=31.5
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++..++||++.=.+ +..+..++++.|.+|+|.+
T Consensus 205 ~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~a~~~i~i 244 (332)
T 2ozt_A 205 QALLSLAQTVTTAIALDESVVSAAEVQRWVDRGWPGFFVI 244 (332)
T ss_dssp HHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEE
Confidence 34556888888898887666 9999999999999997665
No 435
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=36.14 E-value=62 Score=24.41 Aligned_cols=38 Identities=8% Similarity=0.083 Sum_probs=30.9
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
....+++..++||++.=.+ +..+..++++.+.+|+|.+
T Consensus 231 ~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~ 269 (388)
T 3qld_A 231 DLAKLQASLRTPVCLDESVRSVRELKLTARLGAARVLNV 269 (388)
T ss_dssp HHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred HHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 4567888888898876566 8999999999998998765
No 436
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=36.06 E-value=54 Score=24.27 Aligned_cols=39 Identities=18% Similarity=0.187 Sum_probs=31.6
Q ss_pred hHHHHHHHHcCCeEEEeCCC--CHHHHHHHHHcCCCcEEecc
Q 046574 12 HSLLLMRKAFKGTFLVAGGY--DREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi--~~~~ae~~l~~g~~DlVa~g 51 (104)
+.++.|++.+++|+..-||- +.++.+++++.| +--|-++
T Consensus 192 ~~L~~I~~~~~vpLVlHGgSG~~~e~i~~ai~~G-v~KiNi~ 232 (286)
T 1gvf_A 192 QRLAEIREVVDVPLVLHGASDVPDEFVRRTIELG-VTKVNVA 232 (286)
T ss_dssp HHHHHHHHHCCSCEEECCCTTCCHHHHHHHHHTT-EEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHCC-CeEEEEC
Confidence 57788999999999999976 788899999988 4455544
No 437
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=36.01 E-value=53 Score=24.62 Aligned_cols=38 Identities=13% Similarity=0.160 Sum_probs=30.4
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
....+++...+||++.=.+ +..+..++++.+.+|+|.+
T Consensus 243 ~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~i 281 (386)
T 1wue_A 243 DHAQLQRELKTRICLDENIRSLKDCQVALALGSCRSINL 281 (386)
T ss_dssp HHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred HHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEE
Confidence 4556777778888876666 8999999999998998766
No 438
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=35.88 E-value=87 Score=20.44 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=28.3
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++.. ..|+|...+. +.+.+.++++.|..|++.
T Consensus 60 ~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~ 99 (220)
T 1p2f_A 60 EICRMIKETRPETWVILLTLLSDDESVLKGFEAGADDYVT 99 (220)
T ss_dssp HHHHHHHHHCTTSEEEEEESCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHhcCCCCcEEEEEcCCCHHHHHHHHHcCCCEEEE
Confidence 5667788764 4687777666 888899999999766654
No 439
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=35.40 E-value=91 Score=20.24 Aligned_cols=38 Identities=21% Similarity=0.258 Sum_probs=27.8
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++.. ..|+|...+. +.+.+.++++.|..|++.
T Consensus 68 ~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~Ga~~~l~ 107 (215)
T 1a04_A 68 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLL 107 (215)
T ss_dssp HHHHHHHHSCCCSEEEEEECCCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhCCCCcEEEEECCCCHHHHHHHHHcCCcEEEe
Confidence 4667787765 3577766666 888999999999766654
No 440
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=35.26 E-value=63 Score=24.48 Aligned_cols=39 Identities=8% Similarity=0.069 Sum_probs=32.1
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
.....+++..++||.+.=.+ +..+..++++.+.+|+|.+
T Consensus 260 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~i~~ 299 (393)
T 3u9i_A 260 EGLRRLTATRRVPVAADESVASATDAARLARNAAVDVLNI 299 (393)
T ss_dssp THHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCCCCEEEe
Confidence 35567888888898886666 9999999999999998854
No 441
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=35.22 E-value=43 Score=20.44 Aligned_cols=37 Identities=16% Similarity=0.243 Sum_probs=24.4
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+.++.+++... .|+|+..+. +.+.+.+++..|..+++
T Consensus 67 ~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l 105 (154)
T 2qsj_A 67 DGLVRLKRFDPSNAVALISGETDHELIRAALEAGADGFI 105 (154)
T ss_dssp HHHHHHHHHCTTSEEEEC-----CHHHHHHHHTTCCBBC
T ss_pred HHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHccCCEEE
Confidence 56677887754 588887776 77788889998866653
No 442
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=34.34 E-value=43 Score=24.79 Aligned_cols=21 Identities=24% Similarity=0.240 Sum_probs=19.0
Q ss_pred CeEEEeCCC-CHHHHHHHHHcC
Q 046574 23 GTFLVAGGY-DREDGNKAIAEG 43 (104)
Q Consensus 23 ~pvi~~Ggi-~~~~ae~~l~~g 43 (104)
.+|-++||| |.++|.+.++.|
T Consensus 226 vgVKaaGGIrt~e~al~~i~ag 247 (281)
T 2a4a_A 226 IGLKVSGGISDLNTASHYILLA 247 (281)
T ss_dssp CEEEEESSCCSHHHHHHHHHHH
T ss_pred ceEEEeCCCCCHHHHHHHHHHh
Confidence 589999999 999999999876
No 443
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=34.24 E-value=54 Score=18.96 Aligned_cols=37 Identities=5% Similarity=0.089 Sum_probs=20.3
Q ss_pred hHHHHHHHHc---CCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAF---KGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~---~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+..+.+++.- ..|+|...+. +.+....+++.|..|++
T Consensus 62 ~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l 102 (124)
T 1mb3_A 62 EVTKWLKEDDDLAHIPVVAVTAFAMKGDEERIREGGCEAYI 102 (124)
T ss_dssp HHHHHHHHSTTTTTSCEEEEC------CHHHHHHHTCSEEE
T ss_pred HHHHHHHcCccccCCcEEEEECCCCHHHHHHHHhCCCCEEE
Confidence 4556676631 3577776666 66667777777865554
No 444
>2qap_A Fructose-1,6-bisphosphate aldolase; beta barrel, fructose-1,6-bisphosphate teminal tail, lyase; 1.59A {Leishmania mexicana} SCOP: c.1.10.1 PDB: 2qdg_A* 2qdh_A* 1epx_A 1f2j_A
Probab=34.01 E-value=53 Score=25.69 Aligned_cols=45 Identities=11% Similarity=0.383 Sum_probs=30.6
Q ss_pred HHHHHHHHc----CCeEEEeCCCCHHHHHHHHHc-CCCc-------EEecchHHhhC
Q 046574 13 SLLLMRKAF----KGTFLVAGGYDREDGNKAIAE-GRAD-------LVVYGRFFLAN 57 (104)
Q Consensus 13 ~~~~ir~~~----~~pvi~~Ggi~~~~ae~~l~~-g~~D-------lVa~gR~~lan 57 (104)
+...++..+ .+.++++||.|.++|..-|+. ..+. ..+|||+|-..
T Consensus 282 Tv~~L~rtVPpaVpgIvFLSGGqSeeeAt~~LnA~N~~~~~~PW~lsFSygRALq~s 338 (391)
T 2qap_A 282 TVMTLARTMPAMLPGVMFLSGGLSEVQASEYLNAINNSPLPRPYFLSFSYARALQSS 338 (391)
T ss_dssp HHHHHHHHSBTTCCEEEECCTTCCHHHHHHHHHHHTTCCSCCCSEEEEEESHHHHHH
T ss_pred HHHHHhhcCCCccCeeeeCCCCCCHHHHHHHHhccccCCCCCCcceEEehHHHHhHH
Confidence 334455555 346899999999999887732 3333 37889998754
No 445
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=33.69 E-value=78 Score=19.74 Aligned_cols=38 Identities=16% Similarity=0.258 Sum_probs=25.4
Q ss_pred hHHHHHHHHcCCeEEEeCCC-C--HHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-D--REDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~--~~~ae~~l~~g~~DlVa 49 (104)
+.++.+++....|+|...+. + .+.+.++++.|..|++.
T Consensus 88 ~l~~~lr~~~~~~ii~~s~~~~~~~~~~~~~~~~ga~~~l~ 128 (164)
T 3t8y_A 88 EALKLIMKKAPTRVIMVSSLTEEGAAITIEALRNGAVDFIT 128 (164)
T ss_dssp HHHHHHHHHSCCEEEEEESSCCTTCHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhcCCceEEEEecCCccchHHHHHHHHcCcCEEEe
Confidence 46677777766776666555 3 34667888888766654
No 446
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=33.50 E-value=71 Score=21.30 Aligned_cols=44 Identities=9% Similarity=0.104 Sum_probs=32.4
Q ss_pred eEEEeCCC-CHHHHHHHHHc--CCCcEEecchHH-h-hCCcHHHHHhhC
Q 046574 24 TFLVAGGY-DREDGNKAIAE--GRADLVVYGRFF-L-ANPDLPRRFEFN 67 (104)
Q Consensus 24 pvi~~Ggi-~~~~ae~~l~~--g~~DlVa~gR~~-l-anPdl~~ri~~g 67 (104)
.||++..+ +.+++.+.+++ +.+|+|-+|-|+ + .-++++.+++.-
T Consensus 2 ~li~a~D~~~~~~~~~~~~~~~~~~diie~G~p~~~~~g~~~i~~ir~~ 50 (211)
T 3f4w_A 2 KLQLALDELTLPEAMVFMDKVVDDVDIIEVGTPFLIREGVNAIKAIKEK 50 (211)
T ss_dssp EEEEEECSCCHHHHHHHHHHHGGGCSEEEECHHHHHHHTTHHHHHHHHH
T ss_pred cEEEEeCCCCHHHHHHHHHHhhcCccEEEeCcHHHHhccHHHHHHHHHh
Confidence 47888887 77766655543 468999999887 4 468888888763
No 447
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=33.49 E-value=26 Score=21.42 Aligned_cols=37 Identities=22% Similarity=0.213 Sum_probs=19.4
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+.++.+++... .|+|+..+. +.+.+.+++..|..|++
T Consensus 66 ~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l 104 (141)
T 3cu5_A 66 ELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRYV 104 (141)
T ss_dssp HHHHHHHHHCTTCEEEEECCSTTTCCC------CCCEEE
T ss_pred HHHHHHHhhCCCCcEEEEeCCCcHHHHHHHHhCCccEEE
Confidence 45666776553 577766665 66666777777865554
No 448
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=33.32 E-value=83 Score=21.22 Aligned_cols=38 Identities=18% Similarity=0.116 Sum_probs=28.2
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+.++.+|+.. +.|+|...+. +.+.+.++++.|..|++.
T Consensus 84 ~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~yl~ 123 (250)
T 3r0j_A 84 GVLRRLRADGIDAPALFLTARDSLQDKIAGLTLGGDDYVT 123 (250)
T ss_dssp HHHHHHHHTTCCCCEEEEECSTTHHHHHHHHTSTTCEEEE
T ss_pred HHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHcCCcEEEe
Confidence 5667788764 4677766666 888899999999777654
No 449
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=32.85 E-value=79 Score=18.73 Aligned_cols=37 Identities=22% Similarity=0.141 Sum_probs=25.5
Q ss_pred hHHHHHHHH----c-CCeEEEeCCC-CHHHHHHHHHcC-CCcEE
Q 046574 12 HSLLLMRKA----F-KGTFLVAGGY-DREDGNKAIAEG-RADLV 48 (104)
Q Consensus 12 ~~~~~ir~~----~-~~pvi~~Ggi-~~~~ae~~l~~g-~~DlV 48 (104)
+.++.+++. . ..|+|+..+. +.+...+++..| ..|++
T Consensus 77 ~~~~~l~~~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~~l 120 (146)
T 3ilh_A 77 ELIDLFKQHFQPMKNKSIVCLLSSSLDPRDQAKAEASDWVDYYV 120 (146)
T ss_dssp HHHHHHHHHCGGGTTTCEEEEECSSCCHHHHHHHHHCSSCCEEE
T ss_pred HHHHHHHHhhhhccCCCeEEEEeCCCChHHHHHHHhcCCcceee
Confidence 566778873 2 4577666665 888888999888 54443
No 450
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=32.84 E-value=27 Score=22.85 Aligned_cols=38 Identities=13% Similarity=0.145 Sum_probs=27.5
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++....|+|+..+. +.+.+.++++.|..|++.
T Consensus 75 ~~~~~l~~~~~~pii~lt~~~~~~~~~~~~~~ga~~~l~ 113 (205)
T 1s8n_A 75 DAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLV 113 (205)
T ss_dssp HHHHHHHHTTCSCEEEEEEGGGHHHHHTTGGGSCEEEEE
T ss_pred HHHHHHHhcCCCCEEEEecCCCHHHHHHHHhcCCcEEEe
Confidence 46667777655677777666 788888888888766653
No 451
>3cni_A Putative ABC type-2 transporter; structural genomics, thermotoga MARI PSI-2, protein structure initiative; 2.30A {Thermotoga maritima MSB8}
Probab=32.74 E-value=29 Score=22.39 Aligned_cols=33 Identities=12% Similarity=0.303 Sum_probs=27.3
Q ss_pred CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhhCCC
Q 046574 32 DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEFNAP 69 (104)
Q Consensus 32 ~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~g~~ 69 (104)
+.++|+++|.+|.++++. ..-|||-+++..|++
T Consensus 43 s~~ea~~~l~~g~~~~~l-----~IP~~Fs~~l~~g~~ 75 (156)
T 3cni_A 43 DLKEAEEAVKKEKAPAII-----VIPKGFSQSLESGEK 75 (156)
T ss_dssp CHHHHHHHHHHHTCSEEE-----EECTTHHHHHHHTCC
T ss_pred CHHHHHHHHHcCCeeEEE-----EECcchHHHHhCCCC
Confidence 789999999999999864 356888888888764
No 452
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=32.48 E-value=44 Score=24.77 Aligned_cols=29 Identities=31% Similarity=0.360 Sum_probs=25.2
Q ss_pred CeEEEeCCC-CHHHHHHHHHcCCCcEEecc
Q 046574 23 GTFLVAGGY-DREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 23 ~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~g 51 (104)
-.++.+|.+ +++.++++|....+++|.++
T Consensus 14 rl~~Gtgky~~~~~~~~ai~asg~eivtva 43 (268)
T 2htm_A 14 RLILGSGKYEDFGVMREAIAAAKAEVVTVS 43 (268)
T ss_dssp SEEEECSSCSCHHHHHHHHHHTTCSEEEEE
T ss_pred ceEEecCCCCCHHHHHHHHHHhCCCEEEEE
Confidence 367888999 99999999888779998887
No 453
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=32.20 E-value=78 Score=22.81 Aligned_cols=45 Identities=20% Similarity=0.093 Sum_probs=33.0
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhC
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLAN 57 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lan 57 (104)
..+..+|+.++.||+.-.=| ++-+..++...| +|.|.+=-..+.+
T Consensus 91 ~dL~~ir~~v~lPvLrKDfi~~~~qi~ea~~~G-AD~ilLi~a~l~~ 136 (251)
T 1i4n_A 91 AFVRAARNLTCRPILAKDFYIDTVQVKLASSVG-ADAILIIARILTA 136 (251)
T ss_dssp HHHHHHHTTCCSCEEEECCCCSTHHHHHHHHTT-CSEEEEEGGGSCH
T ss_pred HHHHHHHHhCCCCEEEeeCCCCHHHHHHHHHcC-CCEEEEecccCCH
Confidence 45678999999999987766 666787788888 7887764444443
No 454
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=32.04 E-value=87 Score=19.00 Aligned_cols=38 Identities=21% Similarity=0.312 Sum_probs=26.9
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcC-CCcEEe
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEG-RADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g-~~DlVa 49 (104)
+..+.+++.. ..|+|+..+. +.+...+++..| ..+++.
T Consensus 68 ~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~~l~ 108 (154)
T 2rjn_A 68 VFLEQVAKSYPDIERVVISGYADAQATIDAVNRGKISRFLL 108 (154)
T ss_dssp HHHHHHHHHCTTSEEEEEECGGGHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHhCCCCcEEEEecCCCHHHHHHHHhccchheeee
Confidence 4667787765 3587777766 788888999887 545543
No 455
>3mpk_A Virulence sensor protein BVGS; venus flytrap, sensor domain, signaling protein; 2.04A {Bordetella pertussis} PDB: 3mpl_A
Probab=31.64 E-value=73 Score=21.48 Aligned_cols=38 Identities=21% Similarity=0.159 Sum_probs=27.3
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa 49 (104)
+.++.+.+..+..+-..---+...+.+.+.+|.+|+++
T Consensus 60 dl~~~i~~~lg~~~~~~~~~~~~~~~~~l~~G~~D~~~ 97 (267)
T 3mpk_A 60 AVLQLLQLRTGLDFEIIGVDTVEELIAKLRSGEADMAG 97 (267)
T ss_dssp HHHHHHHHHHCCEEEEEEESSHHHHHHHHHHTSCSEEE
T ss_pred HHHHHHHHHHCCeEEEEecCCHHHHHHHHHCCCccEEe
Confidence 45667777777755444222578888999999999975
No 456
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=30.33 E-value=56 Score=21.53 Aligned_cols=37 Identities=14% Similarity=0.085 Sum_probs=27.2
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+.++.+++.-..|+|...+. +.+.+..+++.|..|++
T Consensus 65 ~~~~~l~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l 102 (230)
T 2oqr_A 65 DVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYV 102 (230)
T ss_dssp HHHHHHHHHCSCSEEEEECCHHHHHHHHHHHHCCSCCC
T ss_pred HHHHHHHcCCCCCEEEEeCCCcHHHHHHHHHcCCCEEE
Confidence 56677887655687777776 77778889998976654
No 457
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=30.28 E-value=58 Score=25.03 Aligned_cols=39 Identities=13% Similarity=0.107 Sum_probs=30.0
Q ss_pred hHHHHHHHHcCCeE-EEeCC-C-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTF-LVAGG-Y-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pv-i~~Gg-i-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++.++.|+ |+.|- + +..+..++++.+.+|+|.+
T Consensus 251 ~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~li~~~a~dii~~ 292 (404)
T 3ekg_A 251 WGYAELRRNAPTGMMVTTGEHEATRWGFRMLLEMGCCDIIQP 292 (404)
T ss_dssp HHHHHHHHHSCTTCEEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHHhcCCCeEEEecCccCCHHHHHHHHHcCCCCeEec
Confidence 35567888888774 45553 3 8889999999999998776
No 458
>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A
Probab=29.91 E-value=64 Score=24.00 Aligned_cols=38 Identities=16% Similarity=0.260 Sum_probs=29.0
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+.++.+++... .|||...+. +.+.+.++++.|..|++.
T Consensus 61 ell~~lr~~~~~~pvI~lT~~~~~~~~~~a~~~Ga~~yl~ 100 (368)
T 3dzd_A 61 NFIDFIKENSPDSVVIVITGHGSVDTAVKAIKKGAYEFLE 100 (368)
T ss_dssp THHHHHHHHCTTCEEEEEECSSCCHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHhhCCCCeEEEEeCCCCHHHHHHHHhcCcceEEe
Confidence 56777887754 577777666 888999999999877653
No 459
>4i62_A Amino acid ABC transporter, periplasmic amino ACI protein, putative; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases (NIAI niaid; HET: ARG; 1.05A {Streptococcus pneumoniae}
Probab=29.79 E-value=1.1e+02 Score=20.10 Aligned_cols=38 Identities=13% Similarity=0.159 Sum_probs=27.5
Q ss_pred HHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecc
Q 046574 13 SLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~g 51 (104)
.++.+.+..+..+-..-. +...+.+.+.+|.+|++..+
T Consensus 71 l~~~~~~~~g~~~~~~~~-~~~~~~~~l~~g~~D~~~~~ 108 (269)
T 4i62_A 71 LAKAIATELGVELELSPM-SFDNVLASVQSGKADLAISG 108 (269)
T ss_dssp HHHHHHHHHTCEEEEEEC-CHHHHHHHHHTTSCSEECSS
T ss_pred HHHHHHHHHCCceEEEEc-CHHHHHHHHhCCCccEEecC
Confidence 556677777775544433 78889999999999997543
No 460
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=29.75 E-value=59 Score=23.83 Aligned_cols=38 Identities=21% Similarity=0.246 Sum_probs=27.4
Q ss_pred chHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 11 PHSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 11 ~~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
-+.++.+|+... .|+|...+. +.+.+.++++.|..|++
T Consensus 65 ~~~~~~lr~~~~~~pii~lt~~~~~~~~~~a~~~ga~~yl 104 (394)
T 3eq2_A 65 LELIRRIRQTASETPIIVLSGAGVMSDAVEALRLGAADYL 104 (394)
T ss_dssp HHHHHHHHHTTCCCCEEEC---CHHHHHHHHHHHTCSEEC
T ss_pred HHHHHHHHhhCCCCcEEEEEcCCCHHHHHHHHhcChhhEE
Confidence 357778887653 688888777 78889999999987765
No 461
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=29.58 E-value=84 Score=23.45 Aligned_cols=38 Identities=16% Similarity=0.203 Sum_probs=29.3
Q ss_pred hHHHHHHHHcC-CeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~-~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++... .|||...+. +.+.+.+++..|..|++.
T Consensus 61 ell~~lr~~~~~~pvIvlT~~~~~~~~~~a~~~Ga~dyl~ 100 (387)
T 1ny5_A 61 EILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLT 100 (387)
T ss_dssp HHHHHHHHHCTTSEEEEEEETTCHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHhhCCCCcEEEEeCCCCHHHHHHHHhcCceEEec
Confidence 56677887654 577776666 899999999999888764
No 462
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=29.20 E-value=75 Score=21.96 Aligned_cols=37 Identities=11% Similarity=0.216 Sum_probs=26.7
Q ss_pred hHHHHHHHHcC---CeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAFK---GTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~~---~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+.++.+|+... .|+|...+. +.+.+.++++.|..|++
T Consensus 186 ~l~~~lr~~~~~~~~~ii~~s~~~~~~~~~~a~~~Ga~~yl 226 (259)
T 3luf_A 186 SLVRMLRERYSKQQLAIIGISVSDKRGLSARYLKQGANDFL 226 (259)
T ss_dssp HHHHHHHHHCCTTTSEEEEEECSSSSSHHHHHHHTTCSEEE
T ss_pred HHHHHHHhccCCCCCeEEEEEccCCHHHHHHHHhcChhheE
Confidence 56777888653 577765555 77788889999977764
No 463
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=29.07 E-value=46 Score=25.82 Aligned_cols=39 Identities=5% Similarity=-0.030 Sum_probs=30.4
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++..++||.+.=.+ +..++.++++.|.+|+|.+
T Consensus 271 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~dii~~ 310 (441)
T 3vc5_A 271 DGMARVAAEVPMPLATNMCVVTPEHLPAAVERRPIGVLLI 310 (441)
T ss_dssp HHHHHHHTTSSSCEEESSSCCSGGGHHHHHHHCCCSEEEE
T ss_pred HHHHHHHhcCCCCEEeCCCCCCHHHHHHHHHhCCCCEEee
Confidence 34567888888898765445 8889999999999998766
No 464
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=28.88 E-value=1.2e+02 Score=21.43 Aligned_cols=60 Identities=12% Similarity=0.017 Sum_probs=38.5
Q ss_pred CCCCCcc-hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhh
Q 046574 5 GEKSECP-HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEF 66 (104)
Q Consensus 5 ~~~~~~~-~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~ 66 (104)
.|++.+. +.++.|.+....++..+|-. ++++....+++...|+|-+=- --+|++...++.
T Consensus 51 ~SpR~V~~~~A~~i~~~~~~~~~~v~v~v~~~ei~~~i~~~~ld~vQLHG--~E~~~~~~~l~~ 112 (228)
T 4aaj_A 51 NSKRRIPLEKAREIIENSAIPVFLVSTMVGFSEWAMAIERTGAQYIQVHS--NALPQTIDTLKK 112 (228)
T ss_dssp SSTTBCCHHHHHHHHHHCSSCEEEEECCCCHHHHHHHHHHHTCSEEEECS--CCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHhhCCCCEEEeccCchHHHHHHHHhccchheeccc--ccCHHHHHHHhh
Confidence 4566554 45666777667777777766 888877788776788887721 123555555543
No 465
>1ii5_A SLR1257 protein; membrane protein; HET: GLU; 1.60A {Synechocystis SP} SCOP: c.94.1.1 PDB: 1iit_A 1iiw_A
Probab=28.53 E-value=1.2e+02 Score=19.36 Aligned_cols=39 Identities=18% Similarity=0.116 Sum_probs=26.5
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~ 50 (104)
+.++.+.+..+..+-..-.-+...+.+.+.+|.+|++..
T Consensus 33 dl~~~i~~~~g~~~~~~~~~~~~~~~~~l~~g~~D~~~~ 71 (233)
T 1ii5_A 33 DVWRAVAESQKWNSEYVRQNSISAGITAVAEGELDILIG 71 (233)
T ss_dssp HHHHHHHHHHTCCEEEEECSCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHcCCcEEEEEeCCHHHHHHHHHCCCcCEEEe
Confidence 356667777776543332226788889999999999743
No 466
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=28.52 E-value=1.1e+02 Score=23.44 Aligned_cols=39 Identities=13% Similarity=0.105 Sum_probs=30.2
Q ss_pred hHHHHHHHHc--CCeEEEeC-CC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAF--KGTFLVAG-GY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~--~~pvi~~G-gi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++.+ ++||++.= .+ ++....++++.+.+|+|-+
T Consensus 298 ~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~i 340 (431)
T 2fym_A 298 DGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILI 340 (431)
T ss_dssp HHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCCEEEE
Confidence 3456788888 66776544 44 8999999999999998876
No 467
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=28.26 E-value=1.3e+02 Score=22.90 Aligned_cols=38 Identities=13% Similarity=0.023 Sum_probs=30.5
Q ss_pred HHHHHHHH-----cCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 13 SLLLMRKA-----FKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 13 ~~~~ir~~-----~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
....+++. .++||++.=.+ ++++..++++.+.+|+|-+
T Consensus 287 ~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~i 330 (413)
T 1kko_A 287 MLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMVQI 330 (413)
T ss_dssp HHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCCEEEe
Confidence 44567777 67788776656 8999999999999999876
No 468
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=27.86 E-value=98 Score=21.19 Aligned_cols=38 Identities=8% Similarity=-0.006 Sum_probs=27.4
Q ss_pred chHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 11 PHSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 11 ~~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
-+..+.+|+.. ..|+|+..+. +.+...++++.|..|++
T Consensus 189 ~~l~~~ir~~~~~~piI~lt~~~~~~~~~~~~~~G~~~~l 228 (254)
T 2ayx_A 189 YRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCL 228 (254)
T ss_dssp HHHHHHHHHHHCCSCEEEEESSTTSHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHhcCCCCcEEEEECCCCHHHHHHHHHcCCceEE
Confidence 35677788765 4687776665 78888899999966654
No 469
>3bv4_A Fructose-bisphosphate aldolase A; lyase, acetylation, glycolysis, phosphoprotein, schiff base; HET: 13P; 1.70A {Oryctolagus cuniculus} PDB: 1ado_A* 1ewd_A 1zai_A* 1zah_A* 1zaj_A* 1zal_A 2ot0_A 2ot1_A* 2qut_A 2quv_A 3lge_A 3tu9_A* 3b8d_A 6ald_A* 1ex5_A 1ewe_A 2quu_A 3dfn_A 3dfo_A 3dfp_A ...
Probab=27.60 E-value=50 Score=25.33 Aligned_cols=44 Identities=23% Similarity=0.400 Sum_probs=30.6
Q ss_pred HHHHHHHcC----CeEEEeCCCCHHHHHHHHHc--------CCCcEEecchHHhhC
Q 046574 14 LLLMRKAFK----GTFLVAGGYDREDGNKAIAE--------GRADLVVYGRFFLAN 57 (104)
Q Consensus 14 ~~~ir~~~~----~pvi~~Ggi~~~~ae~~l~~--------g~~DlVa~gR~~lan 57 (104)
...++..+. +.++++||.|.++|..-|+. ++.=-.+|||++-..
T Consensus 250 v~~l~rtvP~aVpgI~fLSGGqS~eeAt~~LnA~N~~~~~~pw~lsfSygRALq~~ 305 (341)
T 3bv4_A 250 VTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQAS 305 (341)
T ss_dssp HHHHHTTSCTTSCEEEECCTTCCHHHHHHHHHHHHHCCSCCCSEEEEEESHHHHHH
T ss_pred HHHHhhcCCcccCeeeecCCCCCHHHHHHHHHHhhccCCCCCeeEEEEehHHHhHH
Confidence 344555543 35899999999999777762 443347899998754
No 470
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=27.60 E-value=1.1e+02 Score=18.55 Aligned_cols=37 Identities=14% Similarity=0.049 Sum_probs=24.4
Q ss_pred hHHHHHHHHc-----CCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAF-----KGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~-----~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+..+.+|+.. ..|+|+..+. +.+.+.++++.|..|++
T Consensus 75 ~~~~~lr~~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l 117 (143)
T 3m6m_D 75 DMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFL 117 (143)
T ss_dssp HHHHHHHHHHHTTCCCCCEEEEESCCCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHhchhccCCCCeEEEEeCCCCHHHHHHHHHcChhhee
Confidence 4566676531 2466655554 88888999998966654
No 471
>4dz1_A DALS D-alanine transporter; D-alanine binding, periplasmic, transport protein; 1.90A {Salmonella enterica} PDB: 3r39_A 4f3s_A
Probab=27.56 E-value=1.2e+02 Score=20.23 Aligned_cols=39 Identities=15% Similarity=0.113 Sum_probs=27.4
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecc
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~g 51 (104)
+.++.+.+..+..+-..-. +...+.+.+++|.+|++..+
T Consensus 57 dl~~~i~~~~g~~~~~~~~-~~~~~~~~l~~g~~D~~~~~ 95 (259)
T 4dz1_A 57 ELFSSYCQSRHCKLNITEY-AWDGMLGAVASGQADVAFSG 95 (259)
T ss_dssp HHHHHHHHHHTCEEEEEEC-CHHHHHHHHHHTSSSEEEEE
T ss_pred HHHHHHHHHhCCeEEEEEc-CHHHHHHHHhCCCCCEEEEC
Confidence 3566677777765444332 78888999999999996543
No 472
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=27.38 E-value=1.1e+02 Score=23.13 Aligned_cols=38 Identities=11% Similarity=0.051 Sum_probs=30.0
Q ss_pred HHHHHHHH-----cCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 13 SLLLMRKA-----FKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 13 ~~~~ir~~-----~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
....+++. .++||++-=.+ ++++..++++.+.+|+|.+
T Consensus 287 ~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~i 330 (413)
T 1kcz_A 287 AMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAGHMVQI 330 (413)
T ss_dssp HHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTTCSSEEEE
T ss_pred HHHHHHHhhhcCCCCCcEEeCCCcCCHHHHHHHHHhCCCCEEEe
Confidence 44567777 66787776555 9999999999999998876
No 473
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=27.14 E-value=1.1e+02 Score=23.63 Aligned_cols=39 Identities=13% Similarity=0.142 Sum_probs=31.3
Q ss_pred hHHHHHHHHc--CCeEEEeCC-C-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAF--KGTFLVAGG-Y-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~--~~pvi~~Gg-i-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++.+ .+||++.-. + ++....++++.+.+|+|-+
T Consensus 310 ~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~i 352 (444)
T 1w6t_A 310 DGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANSILI 352 (444)
T ss_dssp HHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEE
T ss_pred HHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEE
Confidence 3556788888 678877665 5 8999999999999998876
No 474
>2pc4_A 41 kDa antigen, fructose-bisphosphate aldolase; invasion machinery, structu genomics, PSI, protein structure initiative; 2.40A {Plasmodium falciparum} PDB: 2eph_A 1a5c_A
Probab=27.13 E-value=89 Score=24.21 Aligned_cols=46 Identities=22% Similarity=0.416 Sum_probs=32.2
Q ss_pred HHHHHHHHcC----CeEEEeCCCCHHHHHHHHHc-CC------CcEEecchHHhhCC
Q 046574 13 SLLLMRKAFK----GTFLVAGGYDREDGNKAIAE-GR------ADLVVYGRFFLANP 58 (104)
Q Consensus 13 ~~~~ir~~~~----~pvi~~Ggi~~~~ae~~l~~-g~------~DlVa~gR~~lanP 58 (104)
+...++..+. +.++++||.|.++|..-|+. .. .=..++||++-...
T Consensus 260 Tv~~L~rtvPpaVpgI~fLSGGqSeeeAt~~LnamN~~~~~PW~lsFSygRALq~~~ 316 (369)
T 2pc4_A 260 TVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALGPHPWALTFSYGRALQASV 316 (369)
T ss_dssp HHHHHHHHCCTTSCEEEECCTTCCHHHHHHHHHHHHHTCCCSSEEEEEESHHHHHHH
T ss_pred HHHHHHhcCCccCCeeeeCCCCCCHHHHHHHHHHhhcCCCCCceeEEehHHhhhhHH
Confidence 4455666653 36899999999999887765 22 22478899987543
No 475
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=27.06 E-value=59 Score=18.67 Aligned_cols=36 Identities=11% Similarity=0.090 Sum_probs=22.7
Q ss_pred hHHHHHHHH---cCCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKA---FKGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~---~~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+..+.+++. -..|+|+. +. +.+...++++.|..+++
T Consensus 67 ~~~~~l~~~~~~~~~~ii~~-~~~~~~~~~~~~~~g~~~~l 106 (127)
T 2gkg_A 67 LICGKLKKDDDLKNVPIVII-GNPDGFAQHRKLKAHADEYV 106 (127)
T ss_dssp HHHHHHHHSTTTTTSCEEEE-ECGGGHHHHHHSTTCCSEEE
T ss_pred HHHHHHhcCccccCCCEEEE-ecCCchhHHHHHHhCcchhe
Confidence 455667765 24577777 55 66677777777755543
No 476
>3tql_A Arginine-binding protein; transport and binding proteins, transport protein; HET: MSE ARG; 1.59A {Coxiella burnetii} SCOP: c.94.1.0
Probab=26.94 E-value=1.2e+02 Score=19.10 Aligned_cols=39 Identities=10% Similarity=0.111 Sum_probs=27.6
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecc
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~g 51 (104)
+.++.+.+..+..+-..- .+...+.+.+.+|.+|++..+
T Consensus 30 dl~~~i~~~~g~~~~~~~-~~~~~~~~~l~~g~~D~~~~~ 68 (227)
T 3tql_A 30 DIVKAVCKQMQAVCTISN-QPWDSLIPSLKLGKFDALFGG 68 (227)
T ss_dssp HHHHHHHHHTTCEEEEEE-CCHHHHHHHHHHTSCSEECSS
T ss_pred HHHHHHHHHhCCeEEEEe-CCHHHHHHHHhCCCCCEEEec
Confidence 456667777776543332 478889999999999998543
No 477
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=26.50 E-value=1e+02 Score=24.01 Aligned_cols=38 Identities=11% Similarity=-0.032 Sum_probs=30.0
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+....+++.+++||++.=.+ +..+..++++.+.+|++-
T Consensus 289 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~ 327 (470)
T 3p0w_A 289 EVMAEFKRATGIPTATNMIATDWRQMGHAVQLHAVDIPL 327 (470)
T ss_dssp HHHHHHHHHHCCCEEESSSSCSHHHHHHHHHTTCCSEEB
T ss_pred HHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEE
Confidence 34567888889998774334 888999999999999874
No 478
>1w25_A Stalked-cell differentiation controlling protein; two-component system, ggdef domain, cyclic dinucleotide, cyclic-digmp; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A*
Probab=26.19 E-value=1.2e+02 Score=22.59 Aligned_cols=38 Identities=11% Similarity=0.167 Sum_probs=28.3
Q ss_pred hHHHHHHHHc---CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAF---KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~---~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+.++.+++.- ..|||...+. +.+.+.++++.|..|++.
T Consensus 62 ~~~~~l~~~~~~~~~pii~lt~~~~~~~~~~a~~~Ga~~~l~ 103 (459)
T 1w25_A 62 TVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLT 103 (459)
T ss_dssp HHHHHHHHSTTTTTSCEEEEECSSCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHhcCcccCCCCEEEEECCCCHHHHHHHHHcCCCEEEe
Confidence 5667777642 4587777666 899999999999877763
No 479
>3fxb_A Trap dicarboxylate transporter, DCTP subunit; periplasmic substrate binding protein, selectivity helix, TR membrane; HET: 4CS; 2.90A {Silicibacter pomeroyi dss-3}
Probab=26.14 E-value=1.2e+02 Score=22.03 Aligned_cols=43 Identities=12% Similarity=0.015 Sum_probs=30.0
Q ss_pred HHHHHHHHcCC--eEEEeCCC-CHHHHHHHHHcCCCcEEecchHHh
Q 046574 13 SLLLMRKAFKG--TFLVAGGY-DREDGNKAIAEGRADLVVYGRFFL 55 (104)
Q Consensus 13 ~~~~ir~~~~~--pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~l 55 (104)
.++.+.+..+| .|.-+|.+ +..++-+.++.|.+|+....-..+
T Consensus 36 fa~~Vee~s~G~i~v~p~g~Lg~~~e~~~~v~~G~id~~~~~~~~~ 81 (326)
T 3fxb_A 36 FKEEIEANSDHEIQLFPYGTLGESADIMEQTQDGILQFVDQSPGFT 81 (326)
T ss_dssp HHHHHHHSSSCCCEEECTTSSCSHHHHHHHHHHTSCSEEECCHHHH
T ss_pred HHHHHHHHcCCeEEEeeCCCCCCHHHHHHHHhCCCeeEEEecchhh
Confidence 44556666665 44444556 888888999999999987754444
No 480
>3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa} PDB: 3i5a_A*
Probab=25.89 E-value=93 Score=22.09 Aligned_cols=38 Identities=21% Similarity=0.169 Sum_probs=27.4
Q ss_pred hHHHHHHHH--c-CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKA--F-KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~--~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++. . ..|||...+. +.+.+.+++..|..|++.
T Consensus 80 ~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~a~~~Ga~~~l~ 121 (358)
T 3bre_A 80 TLLAAYRGNPATRDIPIIVLSTKEEPTVKSAAFAAGANDYLV 121 (358)
T ss_dssp HHHHHHTTSTTTTTSCEEEEESSCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHhcCcccCCCcEEEEeCCCCHHHHHHHHhcChheEee
Confidence 455667653 2 3577776666 888999999999888764
No 481
>3kbr_A Cyclohexadienyl dehydratase; pseudomonas aeruginos structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Pseudomonas aeruginosa}
Probab=25.73 E-value=80 Score=20.46 Aligned_cols=39 Identities=13% Similarity=0.196 Sum_probs=26.3
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEecc
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~g 51 (104)
+.++.+.+..+..+-..- ++...+...+++|.+|++..+
T Consensus 43 dl~~~i~~~~g~~~~~~~-~~~~~~~~~l~~g~~D~~~~~ 81 (239)
T 3kbr_A 43 DMAQRLAESLGAKLVVVP-TSWPNLMRDFADDRFDIAMSG 81 (239)
T ss_dssp HHHHHHHHHTTCEEEEEE-CCTTTHHHHHHTTCCSEECSS
T ss_pred HHHHHHHHHHCCceEEEE-eCHHHHHHHHHCCCcCEEEeC
Confidence 456667777776433332 256778888999999998543
No 482
>2xwv_A Sialic acid-binding periplasmic protein SIAP; transport protein, trap, sugar transport; HET: SLB; 1.05A {Haemophilus influenzae} PDB: 2xxk_A* 2xa5_A* 2wyp_A* 2wx9_A* 2xwo_A* 2xwk_A* 2v4c_A* 2wyk_A* 2xwi_A* 3b50_A* 2cey_A 2cex_A
Probab=25.67 E-value=1.2e+02 Score=21.81 Aligned_cols=41 Identities=12% Similarity=0.135 Sum_probs=28.2
Q ss_pred HHHHHHHHcCC----eEEEeCCC-CHHHHHHHHHcCCCcEEecchH
Q 046574 13 SLLLMRKAFKG----TFLVAGGY-DREDGNKAIAEGRADLVVYGRF 53 (104)
Q Consensus 13 ~~~~ir~~~~~----pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~ 53 (104)
.++.+.+..++ -+.-+|.+ +..+.-+.++.|.+|+...+-.
T Consensus 24 fa~~v~e~s~G~i~i~v~~~g~Lg~~~~~~e~v~~G~id~~~~~~~ 69 (312)
T 2xwv_A 24 FAKEVKEKSQGKIEISLYPSSQLGDDRAMLKQLKDGSLDFTFAESA 69 (312)
T ss_dssp HHHHHHHHTTTSEEEEEECTTTTCCHHHHHHHHHHTSCCEEEECGG
T ss_pred HHHHHHHHcCCcEEEEEecCCCCCCHHHHHHHHHCCCceEEEeCch
Confidence 34556666665 34555666 7777788889999999766543
No 483
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=25.64 E-value=1e+02 Score=23.85 Aligned_cols=38 Identities=11% Similarity=-0.036 Sum_probs=29.8
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+....+++.+++||.+.=.. +..+..++++.+.+|++-
T Consensus 271 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~ 309 (450)
T 3mzn_A 271 ETMAEFKKRTGLPTATNMIATDYKQLQYAVQLNSVDIPL 309 (450)
T ss_dssp HHHHHHHHHHCCCEEESSSSSSHHHHHHHHHHTCCSEEB
T ss_pred HHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEE
Confidence 34567888889998774334 888999999999999874
No 484
>2im5_A Nicotinate phosphoribosyltransferase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.20A {Porphyromonas gingivalis}
Probab=25.59 E-value=87 Score=24.07 Aligned_cols=48 Identities=2% Similarity=-0.058 Sum_probs=35.5
Q ss_pred hHHHHHHHHcC---C-e----EEEeCCCCHHHHHHHHH--c-CCCcEEecchHHhhCCc
Q 046574 12 HSLLLMRKAFK---G-T----FLVAGGYDREDGNKAIA--E-GRADLVVYGRFFLANPD 59 (104)
Q Consensus 12 ~~~~~ir~~~~---~-p----vi~~Ggi~~~~ae~~l~--~-g~~DlVa~gR~~lanPd 59 (104)
...+.+|++++ . | +|.++|++.+.+.++.+ + ..+|..++|..++.+-+
T Consensus 281 ~~~~~~r~~ld~~G~~~~~k~Ii~SdgLd~~~i~~l~~~~~g~~~d~FGvGT~L~~~~~ 339 (394)
T 2im5_A 281 IFIEKAVRRYEELRVDPKIKYIIFSDSLTPQRAIEIQKLCAGRIKASFGIGTNLTNDVG 339 (394)
T ss_dssp HHHHHHHHHHHHTTCCGGGCEEEECSSCCHHHHHHHHHHHTTTSEEEEEECHHHHSCCS
T ss_pred HHHHHHHHHHHHcCcCcCccEEEEcCCCCHHHHHHHHHHhcCCCceEEEeCcccccCCC
Confidence 34555666652 2 3 99999999999988887 4 34689999999987554
No 485
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=25.55 E-value=25 Score=20.60 Aligned_cols=38 Identities=13% Similarity=0.236 Sum_probs=24.4
Q ss_pred hHHHHHHHHc---CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAF---KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~---~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++.. ..|+|...+. +.+.+.++++.|..|++.
T Consensus 63 ~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~ 104 (127)
T 2jba_A 63 QFIKHLRRESMTRDIPVVMLTARGEEEDRVRGLETGADDCIT 104 (127)
T ss_dssp HHHHHHHTSTTTTTSCEEEEEETTHHHHHHTTCCCSCSEEEE
T ss_pred HHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHhcCCCeEEe
Confidence 3556676642 3577766655 677777888888666543
No 486
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=25.40 E-value=43 Score=22.48 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=26.4
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++....|+|+..+. +.+.+..+++.|..|++.
T Consensus 66 ~~~~~lr~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~ 104 (238)
T 2gwr_A 66 DVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIM 104 (238)
T ss_dssp HHHHHHHTTCCCCEEEEEETTCCSCHHHHHHTTCCEEEE
T ss_pred HHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHCCCCEEEe
Confidence 45667777656677766555 677778888889766654
No 487
>2pfy_A Putative exported protein; extracytoplasmic solute receptor, tripartite ATP independent periplasmic transport, pyroglutamic acid; 1.95A {Bordetella pertussis tohama I}
Probab=25.39 E-value=78 Score=22.51 Aligned_cols=40 Identities=10% Similarity=0.040 Sum_probs=27.2
Q ss_pred HHHHHHHHcCC----eEEEeCCC-CHHHHHHHHHcCCCcEEecch
Q 046574 13 SLLLMRKAFKG----TFLVAGGY-DREDGNKAIAEGRADLVVYGR 52 (104)
Q Consensus 13 ~~~~ir~~~~~----pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR 52 (104)
.++.+.+..++ -+.-+|.+ +..++-+.++.|.+|+...+-
T Consensus 23 fa~~v~e~s~G~i~i~~~~~g~Lg~~~~~~e~v~~G~id~~~~~~ 67 (301)
T 2pfy_A 23 FADEVKAATAGALEIKVQSNSTLLKRPEVKRGVQQGVVQIGEVLV 67 (301)
T ss_dssp HHHHHHHHTTTSEEEEEECTTSSSCGGGHHHHHHHTSSSEEEEEG
T ss_pred HHHHHHHHcCCeEEEEEccchhhCChHHHHHHHHCCCeeeehhhh
Confidence 44556666665 24555666 667777888999999976653
No 488
>3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis}
Probab=25.07 E-value=59 Score=21.65 Aligned_cols=37 Identities=19% Similarity=0.126 Sum_probs=27.5
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEE
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLV 48 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlV 48 (104)
+..+.+++.. ..|+|...+. +.+.+.++++.|..|++
T Consensus 64 ~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~~l 102 (225)
T 3c3w_A 64 ELCRDLLSRMPDLRCLILTSYTSDEAMLDAILAGASGYV 102 (225)
T ss_dssp HHHHHHHHHCTTCEEEEGGGSSSHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHhCCCCcEEEEECCCCHHHHHHHHHCCCCEEE
Confidence 4566787765 3588887776 88889999999966543
No 489
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=24.91 E-value=1.3e+02 Score=21.78 Aligned_cols=38 Identities=16% Similarity=0.257 Sum_probs=24.6
Q ss_pred HHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEecc
Q 046574 13 SLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 13 ~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~g 51 (104)
.++.+++.++..+.++.|. +.+.++.+.+.| +|.+.++
T Consensus 131 l~~~ik~~~~i~i~~s~g~~~~e~l~~L~~aG-~~~i~i~ 169 (350)
T 3t7v_A 131 LVQIVKEELGLPIMISPGLMDNATLLKAREKG-ANFLALY 169 (350)
T ss_dssp HHHHHHHHHCSCEEEECSSCCHHHHHHHHHTT-EEEEECC
T ss_pred HHHHHHhhcCceEEEeCCCCCHHHHHHHHHcC-CCEEEEe
Confidence 4455666555556666555 788887777777 6776654
No 490
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=24.91 E-value=1.1e+02 Score=23.71 Aligned_cols=38 Identities=11% Similarity=-0.063 Sum_probs=29.8
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+....+++.+++||.+.=.+ +..+..++++.+.+|++-
T Consensus 274 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~ 312 (455)
T 3pfr_A 274 EIMAEFRRRTGIPTATNMIATNWREMCHAIMLQSVDIPL 312 (455)
T ss_dssp HHHHHHHHHHCCCEEESSSCCSHHHHHHHHHHTCCSEEB
T ss_pred HHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCEEE
Confidence 34567888889997774334 788999999999999874
No 491
>2pyy_A Ionotropic glutamate receptor bacterial homologue; GLUR0 ligand binding domain, transport protein; HET: GLU; 2.10A {Nostoc punctiforme}
Probab=24.58 E-value=1.4e+02 Score=18.86 Aligned_cols=39 Identities=8% Similarity=-0.090 Sum_probs=26.1
Q ss_pred hHHHHHHHHcCCeEEEeCCCCHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi~~~~ae~~l~~g~~DlVa~ 50 (104)
+.++.+.+..+..+-..-.-+...+.+.+.+|.+|++..
T Consensus 29 dl~~~~~~~~g~~~~~~~~~~~~~~~~~l~~g~~D~~~~ 67 (228)
T 2pyy_A 29 DLWRSIATQIGIESKLIEYSSVPELISAIKDNKVNLGIA 67 (228)
T ss_dssp HHHHHHHHHHTCCEEEEECSSHHHHHHHHHTTSCSEECS
T ss_pred HHHHHHHHHhCCcEEEEEcCCHHHHHHHHHCCCcCEEEe
Confidence 456667777776543332225677888899999999854
No 492
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=24.56 E-value=1.1e+02 Score=22.84 Aligned_cols=39 Identities=13% Similarity=-0.030 Sum_probs=31.2
Q ss_pred hHHHHHHHHcCCeEEEeCCC-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++..+.|+++.=.+ +..++.++++.+.+|.|.+
T Consensus 234 ~~~~~l~~~~~~pia~dE~~~~~~~~~~~~~~~~~d~v~~ 273 (376)
T 4h2h_A 234 EDLEAIRPLCHHALYMDEDGTSLNTVITAAATSLVDGFGM 273 (376)
T ss_dssp HHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEECC
T ss_pred hhHhhhhhcccCccccCcccCCHHHHHHHHHhhccCcccc
Confidence 34567888888898776556 8999999999999998754
No 493
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=24.52 E-value=71 Score=23.23 Aligned_cols=21 Identities=38% Similarity=0.415 Sum_probs=19.0
Q ss_pred CeEEEeCCC-CHHHHHHHHHcC
Q 046574 23 GTFLVAGGY-DREDGNKAIAEG 43 (104)
Q Consensus 23 ~pvi~~Ggi-~~~~ae~~l~~g 43 (104)
.+|-++||| +.++|.+.++.|
T Consensus 199 v~VKaaGGIrt~~~al~~i~ag 220 (260)
T 1p1x_A 199 VGFKPAGGVRTAEDAQKYLAIA 220 (260)
T ss_dssp CEEECBSSCCSHHHHHHHHHHH
T ss_pred ceEEEeCCCCCHHHHHHHHHhh
Confidence 589999999 999999999876
No 494
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=24.46 E-value=65 Score=19.38 Aligned_cols=36 Identities=8% Similarity=0.051 Sum_probs=15.5
Q ss_pred hHHHHHHHHcCCeEEEeCC--C-CHHHHHHHHHcCCCcE
Q 046574 12 HSLLLMRKAFKGTFLVAGG--Y-DREDGNKAIAEGRADL 47 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Gg--i-~~~~ae~~l~~g~~Dl 47 (104)
+.++.+|+....|++...+ . +.+.+.++++.|..|+
T Consensus 77 ~~~~~lr~~~~~~iiil~~~~~~~~~~~~~~~~~ga~~~ 115 (145)
T 3kyj_B 77 EFLRHAKLKTRAKICMLSSVAVSGSPHAARARELGADGV 115 (145)
T ss_dssp HHHHHHHHHCCCEEC-CBSSCSTTSSHHHHHHHTTCSCC
T ss_pred HHHHHHHhcCCCCeEEEEEeccCChHHHHHHHhCCCCEE
Confidence 3444555544444333322 2 3444555555554333
No 495
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=24.24 E-value=1.4e+02 Score=22.66 Aligned_cols=39 Identities=13% Similarity=0.106 Sum_probs=30.7
Q ss_pred hHHHHHHHHcCCeEEEeCC-C-CHHHHHHHHHcCCCcEEec
Q 046574 12 HSLLLMRKAFKGTFLVAGG-Y-DREDGNKAIAEGRADLVVY 50 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Gg-i-~~~~ae~~l~~g~~DlVa~ 50 (104)
+....+++..++||++.=. + ++.++.++++.+.+|+|-+
T Consensus 298 ~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~i 338 (427)
T 2pa6_A 298 EGFAMITKELDIQIVGDDLFVTNVERLRKGIEMKAANALLL 338 (427)
T ss_dssp HHHHHHHHHSSSEEEESTTTTTCHHHHHHHHHHTCCSEEEE
T ss_pred HHHHHHHhhCCCeEEeCccccCCHHHHHHHHHhCCCCEEEE
Confidence 3456688888888876554 4 5999999999999999876
No 496
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=23.83 E-value=63 Score=23.89 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=26.8
Q ss_pred CeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHh
Q 046574 23 GTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFL 55 (104)
Q Consensus 23 ~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~l 55 (104)
-.++.+|.+ +++.++++++...+++|-++---+
T Consensus 21 Rl~~Gtgky~~~~~~~~a~~asg~e~vtva~rR~ 54 (265)
T 1wv2_A 21 RLLVGTGKYKDLDETRRAIEASGAEIVTVAVRRT 54 (265)
T ss_dssp CEEECCSCSSSHHHHHHHHHHSCCSEEEEEGGGC
T ss_pred ceEEecCCCCCHHHHHHHHHHhCCCeEEEEEEee
Confidence 367788999 999999999987799988875444
No 497
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=23.76 E-value=1.9e+02 Score=20.77 Aligned_cols=53 Identities=21% Similarity=0.249 Sum_probs=39.0
Q ss_pred hHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHcCCCcEEecchHHhhCCcHHHHHhh
Q 046574 12 HSLLLMRKAFKGTFLVAGG-------YDREDGNKAIAEGRADLVVYGRFFLANPDLPRRFEF 66 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~Gg-------i~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~ri~~ 66 (104)
..+..+|+.. ..++++|+ ++.+.++.+...| +|++.+|---.-+.++..-+.+
T Consensus 20 ~~l~~lr~~~-d~vi~ngen~~~G~g~~~~~~~~l~~~G-~D~~T~GNHefD~~~l~~~l~~ 79 (252)
T 2z06_A 20 LHLPDIRDRY-DLVIANGENAARGKGLDRRSYRLLREAG-VDLVSLGNHAWDHKEVYALLES 79 (252)
T ss_dssp HHHHHHGGGC-SEEEEECTTTTTTSSCCHHHHHHHHHHT-CCEEECCTTTTSCTTHHHHHHH
T ss_pred HHHHHHHhhC-CEEEEeCCCccCCCCcCHHHHHHHHhCC-CCEEEeccEeeECchHHHHhcc
Confidence 3556677777 67888876 3688888887778 7999999777777777665644
No 498
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=23.71 E-value=77 Score=18.63 Aligned_cols=38 Identities=13% Similarity=0.063 Sum_probs=24.0
Q ss_pred hHHHHHHHHc-CCeEEEeCCC-CHHHHHHHHHcCCCcEEe
Q 046574 12 HSLLLMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVV 49 (104)
Q Consensus 12 ~~~~~ir~~~-~~pvi~~Ggi-~~~~ae~~l~~g~~DlVa 49 (104)
+..+.+++.. ..|+|...+. +.+.+..++..|..|++.
T Consensus 64 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~ 103 (136)
T 1mvo_A 64 EVCKQLRQQKLMFPILMLTAKDEEFDKVLGLELGADDYMT 103 (136)
T ss_dssp HHHHHHHHTTCCCCEEEEECTTCCCCHHHHHHTTCCEEEE
T ss_pred HHHHHHHcCCCCCCEEEEECCCCHHHHHHHHhCCCCEEEE
Confidence 4566677653 3566665554 666667778888666543
No 499
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=23.71 E-value=7.3 Score=24.48 Aligned_cols=36 Identities=25% Similarity=0.248 Sum_probs=22.5
Q ss_pred CeEEEeCCC-CHHHHHHHHHcCCCcEEecchHHhhCCcHHHH
Q 046574 23 GTFLVAGGY-DREDGNKAIAEGRADLVVYGRFFLANPDLPRR 63 (104)
Q Consensus 23 ~pvi~~Ggi-~~~~ae~~l~~g~~DlVa~gR~~lanPdl~~r 63 (104)
..|..+|.+ . .+..|++| |-|.+=|++++||--+.|
T Consensus 59 ~~V~Vng~~v~---~d~~L~dG--DRVEIyrpl~~DPk~~Rr 95 (97)
T 2hj1_A 59 NKIGIFSRPIK---LTDVLKEG--DRIEIYRPLLADPKEIRR 95 (97)
T ss_dssp SEEEEEECSCC---TTCBCCTT--CEEEECCCCC--------
T ss_pred cEEEEcCEECC---CCccCCCC--CEEEEEecccCCHHHHhh
Confidence 358888888 5 55567888 999999999999976554
No 500
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=23.58 E-value=1.7e+02 Score=21.74 Aligned_cols=39 Identities=23% Similarity=0.286 Sum_probs=29.6
Q ss_pred hHHHHHHHHcCCeEEEeC-----------------------CCCHHHHHHHHHcCCCcEEecc
Q 046574 12 HSLLLMRKAFKGTFLVAG-----------------------GYDREDGNKAIAEGRADLVVYG 51 (104)
Q Consensus 12 ~~~~~ir~~~~~pvi~~G-----------------------gi~~~~ae~~l~~g~~DlVa~g 51 (104)
+.++.|++.++.|+.+-| |++.++.++++..| +--|-++
T Consensus 192 ~~L~~I~~~~~vpLVlHGgSsv~~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~G-V~KiNi~ 253 (305)
T 1rvg_A 192 ARLERIARLVPAPLVLHGASAVPPELVERFRASGGEIGEAAGIHPEDIKKAISLG-IAKINTD 253 (305)
T ss_dssp HHHHHHHHHCCSCEEECSCCCCCHHHHHHHHHTTCCCCSCBCCCHHHHHHHHHTT-EEEEEEC
T ss_pred HHHHHHHHhcCCCEEEeCCCCCcHHHHHHHHhhccccccCCCCCHHHHHHHHHCC-CeEEEEC
Confidence 577889999999999887 45788888898888 3444443
Done!