Query 046575
Match_columns 411
No_of_seqs 249 out of 748
Neff 5.7
Searched_HMMs 13730
Date Mon Mar 25 23:54:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046575.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/046575hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1qg8a_ c.68.1.1 (A:) Spore co 35.5 75 0.0055 25.8 8.9 111 139-254 1-122 (255)
2 d2qalc1 d.52.3.1 (C:1-105) Rib 16.7 25 0.0018 26.9 1.6 30 284-313 18-47 (105)
3 d1d4ta_ d.93.1.1 (A:) The Xlp 13.0 64 0.0046 23.3 3.1 22 195-216 2-23 (104)
4 d1iioa_ a.39.4.1 (A:) Hypothet 9.4 35 0.0026 25.2 0.3 20 228-247 60-79 (84)
5 d2uubc1 d.52.3.1 (C:2-106) Rib 8.8 34 0.0025 26.0 0.0 29 284-312 18-46 (105)
6 d2hx5a1 d.38.1.1 (A:1-144) Hyp 7.7 51 0.0037 25.0 0.6 32 2-33 60-92 (144)
7 d1g83a2 d.93.1.1 (A:142-245) T 7.3 49 0.0036 24.2 0.3 36 195-232 4-39 (104)
8 d1lkka_ d.93.1.1 (A:) p56-lck 6.3 64 0.0047 23.5 0.5 21 196-216 3-23 (105)
9 d2shpa2 d.93.1.1 (A:2-110) Tyr 6.1 1.6E+02 0.012 21.5 2.9 22 196-217 2-23 (109)
10 d1rjaa_ d.93.1.1 (A:) Tyrosine 6.1 60 0.0044 23.7 0.3 20 197-216 2-21 (100)
No 1
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}
Probab=35.48 E-value=75 Score=25.83 Aligned_cols=111 Identities=10% Similarity=0.009 Sum_probs=59.9
Q ss_pred CcEEEEEEecC-CCCchHHHHHHHccCCCceEEEEecCCCCCcccccc-cce---eeeeeeCCCCccc----CCccHHHH
Q 046575 139 PKVAFMFLIRG-ILPLAPLWEKFFKGYEGLYSIYLHSSKPGFTQESLN-SSV---FYNRRIPSKPAEW----GKASMIDA 209 (411)
Q Consensus 139 pKIAFLfLa~g-~l~L~~Lwe~ff~g~~~~ysIyVH~sdp~~~~~~~~-~sv---f~~r~Ips~~V~W----G~~SlVeA 209 (411)
|||+.++-++| ..-+++.++.+.......+.|+|.- |.+....... .+. ..-+.+......+ ...+.-.|
T Consensus 1 P~vSiiip~yN~~~~l~~~l~Si~~Qt~~~~eiivvd-d~S~d~t~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~a 79 (255)
T d1qg8a_ 1 PKVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMD-DNSNEETLNVIRPFLNDNRVRFYQSDISGVKERTEKTRYAAL 79 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEEEE-CSCCHHHHHHHGGGGGSTTEEEEECCCCSHHHHHSSCHHHHH
T ss_pred CEEEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEEEE-CCCCccHHHHHHHhhhhcccccccccccccccccccchhccc
Confidence 78999999954 5558888888876544557888887 5432211110 010 0011122211111 23333334
Q ss_pred HHHHHHHHHhCCCCCEEEEecCCccccCC-hHHHHHHHhcC-CCCce
Q 046575 210 ERRLLANALLDFSNERFVLLSETCIPLFN-FTTVYNYLINS-RHSNQ 254 (411)
Q Consensus 210 elrLL~~AL~d~~ndyFvLLSgsdiPL~s-~~~I~~~L~~~-~~sFI 254 (411)
--.+++.| +.+|++.|-+.|++..+ .+.+.+++..+ +..++
T Consensus 80 ~N~gi~~a----~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~~~~~~v 122 (255)
T d1qg8a_ 80 INQAIEMA----EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVI 122 (255)
T ss_dssp HHHHHHHC----CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEE
T ss_pred cccccccc----ccccccccccccccccchHHHHHHHHHhCCCCCeE
Confidence 33334433 56899999999998655 33444555544 44555
No 2
>d2qalc1 d.52.3.1 (C:1-105) Ribosomal protein S3 N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=16.74 E-value=25 Score=26.89 Aligned_cols=30 Identities=23% Similarity=0.337 Sum_probs=23.7
Q ss_pred ccceeeehHHHHHHHHhcccchhHHhhccC
Q 046575 284 GSQWFEVHRKVAVEIISDVTYYPVLRDHCR 313 (411)
Q Consensus 284 GSQWfsLtR~~A~~Il~d~~~~~~F~~~cr 313 (411)
.|.||+=.++.+++|.+|.....-..++++
T Consensus 18 ~S~Wfa~~~~Y~~~l~eD~~IR~~i~k~~~ 47 (105)
T d2qalc1 18 NSTWFANTKEFADNLDSDFKVRQYLTKELA 47 (105)
T ss_dssp SCCCCCCHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCEEcCCccchHHHHHHHHHHHHHHHHHHH
Confidence 699999999999999999875555555553
No 3
>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.02 E-value=64 Score=23.26 Aligned_cols=22 Identities=32% Similarity=0.273 Sum_probs=18.4
Q ss_pred CCCCcccCCccHHHHHHHHHHH
Q 046575 195 PSKPAEWGKASMIDAERRLLAN 216 (411)
Q Consensus 195 ps~~V~WG~~SlVeAelrLL~~ 216 (411)
.+.+-.||.+|.-+||..|.++
T Consensus 2 e~~pwyhG~isR~eAe~lL~~~ 23 (104)
T d1d4ta_ 2 DAVAVYHGKISRETGEKLLLAT 23 (104)
T ss_dssp TTCTTBCCSCCHHHHHHHHHHH
T ss_pred CcCCccccCCCHHHHHHHHhhC
Confidence 3567889999999999888765
No 4
>d1iioa_ a.39.4.1 (A:) Hypothetical protein MTH865 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=9.38 E-value=35 Score=25.23 Aligned_cols=20 Identities=15% Similarity=0.288 Sum_probs=17.3
Q ss_pred EecCCccccCChHHHHHHHh
Q 046575 228 LLSETCIPLFNFTTVYNYLI 247 (411)
Q Consensus 228 LLSgsdiPL~s~~~I~~~L~ 247 (411)
+|.++|+|+++.+++.+-+.
T Consensus 60 ~l~~~DFP~ksae~lad~ii 79 (84)
T d1iioa_ 60 VLTADDFPFKSAEEVADTIV 79 (84)
T ss_dssp GSCGGGSBCSHHHHHHHHHH
T ss_pred hcCcccCCCCCHHHHHHHHH
Confidence 57789999999999988765
No 5
>d2uubc1 d.52.3.1 (C:2-106) Ribosomal protein S3 N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=8.81 E-value=34 Score=26.01 Aligned_cols=29 Identities=14% Similarity=0.318 Sum_probs=23.0
Q ss_pred ccceeeehHHHHHHHHhcccchhHHhhcc
Q 046575 284 GSQWFEVHRKVAVEIISDVTYYPVLRDHC 312 (411)
Q Consensus 284 GSQWfsLtR~~A~~Il~d~~~~~~F~~~c 312 (411)
.|.||+=.++.+.++.+|.....-+.+++
T Consensus 18 ~S~W~a~~~~y~~~l~eD~~IR~~i~k~~ 46 (105)
T d2uubc1 18 ESRWYAGKKQYRHLLLEDQRIRGLLEKEL 46 (105)
T ss_dssp SCBCCCCTTTTTHHHHHHHHHHHHHHHST
T ss_pred CceEcCChhhhHHHHHHHHHHHHHHHhhc
Confidence 69999989999999999977555555444
No 6
>d2hx5a1 d.38.1.1 (A:1-144) Hypothetical protein PMT2055 {Prochlorococcus marinus [TaxId: 1219]}
Probab=7.68 E-value=51 Score=25.02 Aligned_cols=32 Identities=9% Similarity=0.129 Sum_probs=25.4
Q ss_pred Ccceeeeehhhhhhhhccccccc-eeEEeehhH
Q 046575 2 KKCKIIVFAKELTIQFKREVGKG-SFHVTTTII 33 (411)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 33 (411)
++.++...+.+.++++++|+..| .++|.+.+.
T Consensus 60 ~~~~~~~~v~~~~~~y~~~~~~~d~i~v~~~v~ 92 (144)
T d2hx5a1 60 VTPEVALPIIHCQADFRRPIHTGDALAMELRPE 92 (144)
T ss_dssp SCCSEECCEEEEEEEECSCCCTTCEEEEEEEEE
T ss_pred ccCceEEEEEEEEEEEeccccCCcceeEEEEEe
Confidence 46677888899999999999977 677766653
No 7
>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.29 E-value=49 Score=24.15 Aligned_cols=36 Identities=31% Similarity=0.255 Sum_probs=23.4
Q ss_pred CCCCcccCCccHHHHHHHHHHHHHhCCCCCEEEEecCC
Q 046575 195 PSKPAEWGKASMIDAERRLLANALLDFSNERFVLLSET 232 (411)
Q Consensus 195 ps~~V~WG~~SlVeAelrLL~~AL~d~~ndyFvLLSgs 232 (411)
.+++-.||.+|.-+||..|++..-.+ -.+.|=-|++
T Consensus 4 ~~~~Wy~g~i~R~eAe~~L~~~g~~~--G~FLVR~S~~ 39 (104)
T d1g83a2 4 QAEEWYFGKLGRKDAERQLLSFGNPR--GTFLIRESET 39 (104)
T ss_dssp GGSSSBCTTCCHHHHHHHHHSTTCCT--TCEEEEECSS
T ss_pred ccCCCcCCCCCHHHHHHHHHhcCCCC--CcEEEeccCC
Confidence 34567889999999998876543222 2445555544
No 8
>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.30 E-value=64 Score=23.54 Aligned_cols=21 Identities=43% Similarity=0.455 Sum_probs=16.4
Q ss_pred CCCcccCCccHHHHHHHHHHH
Q 046575 196 SKPAEWGKASMIDAERRLLAN 216 (411)
Q Consensus 196 s~~V~WG~~SlVeAelrLL~~ 216 (411)
+++-.||++|.-+||..|++.
T Consensus 3 ~~pWy~g~isR~eAe~~L~~~ 23 (105)
T d1lkka_ 3 PEPWFFKNLSRKDAERQLLAP 23 (105)
T ss_dssp CCTTBCTTCCHHHHHHHHTST
T ss_pred cCCccCCCCCHHHHHHHHHhc
Confidence 456678999999999887543
No 9
>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.12 E-value=1.6e+02 Score=21.47 Aligned_cols=22 Identities=23% Similarity=0.175 Sum_probs=18.0
Q ss_pred CCCcccCCccHHHHHHHHHHHH
Q 046575 196 SKPAEWGKASMIDAERRLLANA 217 (411)
Q Consensus 196 s~~V~WG~~SlVeAelrLL~~A 217 (411)
++.-.||.+|.-+||..|+++.
T Consensus 2 ~~~Wy~g~isR~~Ae~lL~~~~ 23 (109)
T d2shpa2 2 SRRWFHPNITGVEAENLLLTRG 23 (109)
T ss_dssp CSTTBCSSCCHHHHHHHHHHHC
T ss_pred CCccccCCCCHHHHHHHHhhCC
Confidence 4567899999999998887653
No 10
>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.09 E-value=60 Score=23.66 Aligned_cols=20 Identities=40% Similarity=0.416 Sum_probs=15.5
Q ss_pred CCcccCCccHHHHHHHHHHH
Q 046575 197 KPAEWGKASMIDAERRLLAN 216 (411)
Q Consensus 197 ~~V~WG~~SlVeAelrLL~~ 216 (411)
++-.||.+|.-+||..|++.
T Consensus 2 epWy~g~isR~~Ae~~L~~~ 21 (100)
T d1rjaa_ 2 EPWFFGCISRSEAVRRLQAE 21 (100)
T ss_dssp CCCBCTTCCHHHHHHHHSST
T ss_pred CCCcCCCCCHHHHHHHHhcc
Confidence 45578999999999876543
Done!