Query 046579
Match_columns 416
No_of_seqs 164 out of 1834
Neff 9.5
Searched_HMMs 29240
Date Tue Mar 26 00:00:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046579.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046579hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 99.3 1.4E-09 4.8E-14 101.3 26.0 218 128-390 52-285 (306)
2 2woz_A Kelch repeat and BTB do 99.2 3.9E-08 1.3E-12 92.0 28.9 173 126-317 51-238 (318)
3 1zgk_A Kelch-like ECH-associat 99.1 8.8E-09 3E-13 96.0 23.0 216 128-389 67-299 (308)
4 2xn4_A Kelch-like protein 2; s 99.1 2.1E-08 7.1E-13 93.0 25.4 215 128-388 58-288 (302)
5 4asc_A Kelch repeat and BTB do 99.1 3.3E-08 1.1E-12 92.3 25.6 152 147-317 68-228 (315)
6 2vpj_A Kelch-like protein 12; 99.1 3.2E-08 1.1E-12 91.6 24.0 215 128-388 59-289 (301)
7 3ii7_A Kelch-like protein 7; p 99.0 5.2E-08 1.8E-12 90.5 23.0 198 145-389 23-237 (306)
8 1zgk_A Kelch-like ECH-associat 99.0 3.8E-08 1.3E-12 91.7 20.6 201 145-390 38-253 (308)
9 2vpj_A Kelch-like protein 12; 99.0 1E-07 3.4E-12 88.3 22.3 199 145-389 30-243 (301)
10 2xn4_A Kelch-like protein 2; s 99.0 1.4E-07 4.9E-12 87.3 23.1 200 145-390 29-242 (302)
11 1fs1_A SKP2 F-BOX, cyclin A/CD 99.0 4.3E-10 1.5E-14 75.5 4.3 41 30-70 8-48 (53)
12 2e31_A FBS1, F-box only protei 98.8 2E-09 6.7E-14 98.3 3.0 43 29-71 49-92 (297)
13 2uvk_A YJHT; unknown function, 98.8 6.4E-07 2.2E-11 85.0 19.9 171 127-318 15-236 (357)
14 4asc_A Kelch repeat and BTB do 98.7 2.3E-06 8E-11 79.6 20.7 171 127-316 94-283 (315)
15 2woz_A Kelch repeat and BTB do 98.7 2.8E-06 9.7E-11 79.2 20.6 199 147-390 25-244 (318)
16 2uvk_A YJHT; unknown function, 98.6 7.6E-06 2.6E-10 77.5 22.7 217 127-385 61-350 (357)
17 2zwa_A Leucine carboxyl methyl 98.5 1.2E-05 4.1E-10 83.3 21.3 176 130-318 396-591 (695)
18 2ovr_B FBW7, F-BOX/WD repeat p 98.3 0.00027 9.1E-09 68.7 24.6 41 31-71 19-59 (445)
19 3v7d_B Cell division control p 98.2 0.0041 1.4E-07 60.3 32.6 36 32-67 16-51 (464)
20 1p22_A F-BOX/WD-repeat protein 98.2 0.00025 8.4E-09 68.8 21.4 39 32-70 12-54 (435)
21 1k3i_A Galactose oxidase precu 97.9 0.00021 7.2E-09 73.5 17.0 227 126-390 248-510 (656)
22 2zwa_A Leucine carboxyl methyl 97.8 0.00026 9E-09 73.3 15.2 165 131-314 451-639 (695)
23 3l2o_B F-box only protein 4; s 97.6 1.9E-05 6.7E-10 71.2 2.9 42 30-71 4-45 (312)
24 2ast_B S-phase kinase-associat 97.3 0.00013 4.3E-09 68.3 3.9 43 29-71 7-49 (336)
25 1k3i_A Galactose oxidase precu 97.3 0.0017 5.8E-08 66.7 12.7 151 148-316 168-329 (656)
26 2p1m_B Transport inhibitor res 96.3 0.0018 6.3E-08 65.3 3.2 34 31-64 6-40 (594)
27 3ogk_B Coronatine-insensitive 95.6 0.0047 1.6E-07 62.3 2.7 34 32-65 14-48 (592)
28 3dsm_A Uncharacterized protein 91.0 8.8 0.0003 34.8 23.6 197 130-382 52-258 (328)
29 1ri6_A Putative isomerase YBHE 90.1 9.8 0.00034 33.9 18.8 151 206-388 152-321 (343)
30 3q7m_A Lipoprotein YFGL, BAMB; 87.8 16 0.00056 33.4 19.6 110 126-260 98-209 (376)
31 3dsm_A Uncharacterized protein 87.6 16 0.00054 33.0 21.7 139 131-292 2-147 (328)
32 3jro_A Fusion protein of prote 87.2 24 0.00082 36.2 17.7 70 286-379 170-240 (753)
33 3jrp_A Fusion protein of prote 85.5 20 0.00069 32.2 18.6 71 285-379 171-242 (379)
34 3no2_A Uncharacterized protein 83.4 23 0.00079 31.2 14.2 27 358-384 175-202 (276)
35 4gga_A P55CDC, cell division c 83.3 29 0.00099 32.3 20.6 198 130-384 115-317 (420)
36 3q7m_A Lipoprotein YFGL, BAMB; 83.0 14 0.0005 33.8 12.5 117 233-386 47-171 (376)
37 3u4y_A Uncharacterized protein 82.8 25 0.00085 31.1 20.7 177 145-380 19-210 (331)
38 3mbr_X Glutamine cyclotransfer 79.6 29 0.001 30.2 12.2 110 237-386 28-142 (243)
39 3bws_A Protein LP49; two-domai 76.5 47 0.0016 30.6 21.8 189 129-384 178-397 (433)
40 3sjl_D Methylamine dehydrogena 76.4 51 0.0017 30.9 16.1 126 239-391 237-377 (386)
41 3bws_A Protein LP49; two-domai 75.3 51 0.0017 30.4 19.2 197 131-384 133-341 (433)
42 4e54_B DNA damage-binding prot 71.9 64 0.0022 30.0 15.3 185 145-381 141-331 (435)
43 4a11_B DNA excision repair pro 71.7 58 0.002 29.4 18.7 32 346-381 337-369 (408)
44 3hfq_A Uncharacterized protein 70.2 59 0.002 28.9 18.0 122 239-384 50-179 (347)
45 1kb0_A Quinohemoprotein alcoho 69.6 24 0.00082 35.8 10.5 31 233-263 71-103 (677)
46 3nol_A Glutamine cyclotransfer 68.0 52 0.0018 28.9 11.0 106 237-382 50-160 (262)
47 3v9f_A Two-component system se 67.1 1.2E+02 0.0039 31.1 20.7 189 146-385 427-619 (781)
48 1l0q_A Surface layer protein; 65.9 77 0.0026 28.6 23.0 180 145-385 95-283 (391)
49 1yiq_A Quinohemoprotein alcoho 65.7 22 0.00076 36.1 9.4 31 233-263 64-96 (689)
50 4a2l_A BT_4663, two-component 65.5 1.2E+02 0.0043 30.9 24.4 213 130-384 224-443 (795)
51 1l0q_A Surface layer protein; 65.3 79 0.0027 28.5 22.1 177 145-384 11-196 (391)
52 2ad6_A Methanol dehydrogenase 64.9 46 0.0016 32.9 11.3 31 233-263 56-90 (571)
53 3jrp_A Fusion protein of prote 63.0 83 0.0028 27.9 16.7 112 246-388 179-299 (379)
54 2bkl_A Prolyl endopeptidase; m 61.4 1.4E+02 0.0047 30.0 22.9 190 146-385 202-405 (695)
55 1flg_A Protein (quinoprotein e 61.3 50 0.0017 32.8 10.8 31 233-263 62-94 (582)
56 3scy_A Hypothetical bacterial 61.3 91 0.0031 27.9 21.4 118 239-384 221-346 (361)
57 3hfq_A Uncharacterized protein 59.7 94 0.0032 27.5 20.6 152 206-385 163-327 (347)
58 3vgz_A Uncharacterized protein 59.7 92 0.0031 27.4 24.1 207 130-386 99-312 (353)
59 3dwl_C Actin-related protein 2 59.3 99 0.0034 27.6 13.1 191 145-380 32-239 (377)
60 1w6s_A Methanol dehydrogenase 59.2 1.1E+02 0.0038 30.4 12.9 31 233-263 56-90 (599)
61 3e5z_A Putative gluconolactona 58.7 90 0.0031 27.0 16.0 197 126-382 74-291 (296)
62 3scy_A Hypothetical bacterial 58.1 1E+02 0.0035 27.5 20.4 36 348-387 215-252 (361)
63 4aez_A CDC20, WD repeat-contai 57.2 1.2E+02 0.0039 27.8 21.0 182 145-384 112-300 (401)
64 3i2n_A WD repeat-containing pr 56.7 1E+02 0.0035 27.0 17.6 30 346-379 324-355 (357)
65 1kv9_A Type II quinohemoprotei 56.2 56 0.0019 33.0 10.3 32 232-263 59-92 (668)
66 4a2l_A BT_4663, two-component 56.1 1.8E+02 0.0062 29.7 23.7 195 147-384 378-578 (795)
67 1evh_A WH1 domain, protein (ME 55.3 30 0.001 26.0 6.1 44 146-197 11-54 (112)
68 3ei3_B DNA damage-binding prot 54.7 1.2E+02 0.0041 27.2 23.9 187 145-380 95-285 (383)
69 3dwl_C Actin-related protein 2 53.7 1.2E+02 0.0042 27.0 14.8 37 347-387 255-291 (377)
70 3nok_A Glutaminyl cyclase; bet 52.6 83 0.0028 27.7 9.4 132 236-410 61-195 (268)
71 1ri6_A Putative isomerase YBHE 52.5 1.2E+02 0.004 26.4 20.2 123 239-387 139-274 (343)
72 2z2n_A Virginiamycin B lyase; 52.0 1.1E+02 0.0038 26.0 20.7 135 126-292 104-242 (299)
73 2iwa_A Glutamine cyclotransfer 51.6 1.2E+02 0.0042 26.5 11.8 104 240-382 32-140 (266)
74 1ddw_A GLGF-domain protein hom 49.9 23 0.00077 27.1 4.7 40 146-195 11-51 (120)
75 3sfz_A APAF-1, apoptotic pepti 48.3 2.9E+02 0.0098 29.7 21.6 206 127-384 622-835 (1249)
76 3sfz_A APAF-1, apoptotic pepti 47.0 1.4E+02 0.0049 32.1 12.4 179 145-382 982-1163(1249)
77 3v9f_A Two-component system se 45.5 2.6E+02 0.0088 28.4 22.6 216 126-384 71-294 (781)
78 3dr2_A Exported gluconolactona 45.3 1.5E+02 0.0053 25.7 13.2 107 146-268 169-277 (305)
79 3g4e_A Regucalcin; six bladed 44.2 1.6E+02 0.0054 25.5 21.4 66 130-220 23-88 (297)
80 2p4o_A Hypothetical protein; p 44.1 1.6E+02 0.0056 25.7 13.3 65 239-314 42-108 (306)
81 1gxr_A ESG1, transducin-like e 43.3 1.6E+02 0.0055 25.4 20.8 137 206-384 120-262 (337)
82 2hz6_A Endoplasmic reticulum t 42.7 9.4 0.00032 35.4 1.8 30 234-263 4-35 (369)
83 1yr2_A Prolyl oligopeptidase; 42.0 2.8E+02 0.0097 27.9 24.4 161 179-384 273-448 (741)
84 1rwi_B Serine/threonine-protei 41.4 1.6E+02 0.0054 24.7 13.9 110 126-262 29-142 (270)
85 1r5m_A SIR4-interacting protei 41.0 2E+02 0.0068 25.8 18.4 144 130-308 216-361 (425)
86 3ott_A Two-component system se 40.7 3E+02 0.01 27.8 15.0 195 126-384 68-267 (758)
87 2mad_H Methylamine dehydrogena 40.4 2.2E+02 0.0074 26.0 15.1 118 239-383 224-356 (373)
88 2ece_A 462AA long hypothetical 40.2 2.4E+02 0.0081 27.0 11.1 129 248-388 227-364 (462)
89 1nir_A Nitrite reductase; hemo 40.0 2.7E+02 0.0091 27.0 17.7 192 145-384 301-521 (543)
90 4a11_B DNA excision repair pro 38.5 2.1E+02 0.0073 25.4 17.2 25 359-383 305-329 (408)
91 2fp8_A Strictosidine synthase; 38.4 2E+02 0.0069 25.1 10.9 133 146-308 165-313 (322)
92 3azo_A Aminopeptidase; POP fam 38.1 3E+02 0.01 26.9 18.9 213 129-383 138-375 (662)
93 3dm0_A Maltose-binding peripla 37.9 3.1E+02 0.011 27.1 20.4 101 246-384 538-639 (694)
94 4g56_B MGC81050 protein; prote 37.3 2.3E+02 0.0077 25.4 16.2 190 129-378 148-344 (357)
95 2be1_A Serine/threonine-protei 36.7 1.6E+02 0.0054 26.9 9.1 30 359-388 111-141 (339)
96 1yfq_A Cell cycle arrest prote 36.3 2.1E+02 0.0072 24.7 20.5 117 242-382 163-287 (342)
97 2aq5_A Coronin-1A; WD40 repeat 35.7 2.5E+02 0.0084 25.3 21.1 195 145-386 103-310 (402)
98 3f3f_A Nucleoporin SEH1; struc 35.5 1.7E+02 0.0058 25.2 9.2 70 285-379 22-92 (351)
99 1q7f_A NHL, brain tumor CG1071 34.5 2.1E+02 0.0072 24.2 19.3 151 129-306 38-192 (286)
100 2hes_X YDR267CP; beta-propelle 33.3 2.1E+02 0.0071 25.1 9.4 24 240-263 262-285 (330)
101 2hz6_A Endoplasmic reticulum t 33.0 48 0.0016 30.5 5.0 26 361-386 175-201 (369)
102 4gqb_B Methylosome protein 50; 32.1 2.7E+02 0.0094 24.8 18.3 195 130-383 92-295 (344)
103 1k8k_C P40, ARP2/3 complex 41 31.9 2.6E+02 0.0089 24.4 20.4 35 346-384 205-240 (372)
104 1gxr_A ESG1, transducin-like e 31.8 2.4E+02 0.0083 24.1 21.2 131 145-309 162-297 (337)
105 1k8k_C P40, ARP2/3 complex 41 31.8 2.6E+02 0.0089 24.4 19.2 72 285-387 213-286 (372)
106 2ad6_A Methanol dehydrogenase 31.1 2E+02 0.0068 28.2 9.5 57 206-263 126-192 (571)
107 1got_B GT-beta; complex (GTP-b 30.6 2.8E+02 0.0095 24.4 23.0 181 145-382 76-262 (340)
108 3iz6_a 40S ribosomal protein R 29.9 3E+02 0.01 24.6 15.8 108 246-384 177-287 (380)
109 3mkq_A Coatomer beta'-subunit; 29.8 4.4E+02 0.015 26.4 18.8 202 124-383 17-223 (814)
110 1kv9_A Type II quinohemoprotei 29.4 1.8E+02 0.0062 29.1 9.0 57 206-263 128-194 (668)
111 2ojh_A Uncharacterized protein 29.2 2.5E+02 0.0084 23.3 20.0 135 144-310 20-162 (297)
112 1i2h_A PSD-ZIP45(homer-1C/VESL 29.0 90 0.0031 25.3 5.3 40 146-195 16-56 (168)
113 4aow_A Guanine nucleotide-bind 28.8 2.8E+02 0.0095 23.8 20.2 30 346-379 309-339 (340)
114 1yiq_A Quinohemoprotein alcoho 27.6 1.8E+02 0.006 29.4 8.6 58 206-264 132-200 (689)
115 2dg1_A DRP35, lactonase; beta 27.5 3E+02 0.01 23.8 21.1 150 129-308 53-213 (333)
116 1nir_A Nitrite reductase; hemo 27.1 4.3E+02 0.015 25.4 17.0 114 239-381 334-462 (543)
117 1egx_A VAsp, vasodilator-stimu 26.8 1.3E+02 0.0046 22.5 5.7 44 147-197 12-55 (115)
118 2be1_A Serine/threonine-protei 26.5 1.4E+02 0.0046 27.3 6.7 55 206-260 68-132 (339)
119 1rwi_B Serine/threonine-protei 25.7 2.9E+02 0.0098 22.9 17.3 108 130-264 76-186 (270)
120 3dr2_A Exported gluconolactona 24.5 3.4E+02 0.012 23.4 17.7 26 358-384 249-274 (305)
121 4ggc_A P55CDC, cell division c 24.3 3.2E+02 0.011 23.1 20.0 67 129-216 34-100 (318)
122 3nol_A Glutamine cyclotransfer 23.6 3.6E+02 0.012 23.4 13.6 143 205-388 65-212 (262)
123 2hes_X YDR267CP; beta-propelle 23.1 3.7E+02 0.013 23.4 9.9 65 299-387 129-194 (330)
124 3odt_A Protein DOA1; ubiquitin 23.1 3.4E+02 0.012 22.8 19.9 110 238-386 194-305 (313)
125 1npe_A Nidogen, entactin; glyc 22.9 3.4E+02 0.012 22.8 20.6 110 128-262 44-159 (267)
126 3fm0_A Protein CIAO1; WDR39,SG 22.6 3.9E+02 0.013 23.4 9.8 76 285-388 27-103 (345)
127 1kb0_A Quinohemoprotein alcoho 21.7 6.1E+02 0.021 25.3 19.2 58 206-264 139-207 (677)
128 4e54_B DNA damage-binding prot 21.6 4.6E+02 0.016 23.9 18.0 25 358-382 411-435 (435)
129 1erj_A Transcriptional repress 21.4 4.5E+02 0.015 23.6 23.0 149 130-308 133-287 (393)
130 3fvz_A Peptidyl-glycine alpha- 21.1 4.1E+02 0.014 23.1 14.2 158 131-308 154-322 (329)
131 1qks_A Cytochrome CD1 nitrite 20.7 5.9E+02 0.02 24.8 21.4 201 131-386 166-382 (567)
132 3ow8_A WD repeat-containing pr 20.1 4.3E+02 0.015 22.9 20.1 179 145-383 101-285 (321)
133 1r5m_A SIR4-interacting protei 20.1 4.6E+02 0.016 23.2 21.8 108 238-384 216-326 (425)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.30 E-value=1.4e-09 Score=101.27 Aligned_cols=218 Identities=14% Similarity=0.072 Sum_probs=134.1
Q ss_pred eeeCceEEeeecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEE
Q 046579 128 QSCNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQI 207 (416)
Q Consensus 128 ~s~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~ 207 (416)
+..+|.|++..+........++++||.|++|..+++++.++.. ..++ .++ -+++.+............+
T Consensus 52 ~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~----~~~~-~~~------~~iyv~GG~~~~~~~~~~~ 120 (306)
T 3ii7_A 52 VFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDS----LAAC-AAE------GKIYTSGGSEVGNSALYLF 120 (306)
T ss_dssp EEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBS----CEEE-EET------TEEEEECCBBTTBSCCCCE
T ss_pred EEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccc----eeEE-EEC------CEEEEECCCCCCCcEeeeE
Confidence 3456766666543222345699999999999999887754332 1211 121 2455555443222234479
Q ss_pred EEEECCCCCeeeccCCCccccccccCCcEEEccEEEEEee----------CCcEEEEEcCCceEeecCCCCCCCcccccc
Q 046579 208 EIYSSKTGPWRLSGGSFTAPSVINFRGGVFWNGAIHWVST----------HGSSLYFDVDQEKLREMPMPPIPDEWEERR 277 (416)
Q Consensus 208 ~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~----------~~~il~fD~~~e~~~~i~~P~~~~~~~~~~ 277 (416)
++|+..+++|+..... +. .......+.++|.+|.+.. ...+..||+.+++|+.++..+.+..
T Consensus 121 ~~~d~~~~~W~~~~~~-p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~----- 192 (306)
T 3ii7_A 121 ECYDTRTESWHTKPSM-LT--QRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARK----- 192 (306)
T ss_dssp EEEETTTTEEEEECCC-SS--CCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCB-----
T ss_pred EEEeCCCCceEeCCCC-cC--CcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhh-----
Confidence 9999999999987432 11 1234456788999999864 2458899999999998852222111
Q ss_pred eeEEEEeCCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCC
Q 046579 278 HQYFGESRGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREEND 357 (416)
Q Consensus 278 ~~~l~~~~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (416)
....+..+|+|+++.........-.||.++-...+|.....+ |.-. .......+
T Consensus 193 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~---------p~~r-----------~~~~~~~~------ 246 (306)
T 3ii7_A 193 NHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPM---------PWKG-----------VTVKCAAV------ 246 (306)
T ss_dssp SCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCC---------SCCB-----------SCCEEEEE------
T ss_pred cceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCC---------CCCc-----------cceeEEEE------
Confidence 123556799999986554332234678888666789866432 1111 11122222
Q ss_pred CCcEEEEee------CCeEEEEEcCCCcEEEeeecCCCC
Q 046579 358 DDSYLVLHL------PKKAVRYNLKDRTFKKLHDVAPAG 390 (416)
Q Consensus 358 ~~~~i~l~~------~~~l~~ydl~~~~~~~v~~~~~~~ 390 (416)
++.++++.. ...+..||+++++|+.+..+...+
T Consensus 247 ~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r 285 (306)
T 3ii7_A 247 GSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFP 285 (306)
T ss_dssp TTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCS
T ss_pred CCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCccccc
Confidence 244444432 258999999999999998776543
No 2
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.17 E-value=3.9e-08 Score=91.99 Aligned_cols=173 Identities=12% Similarity=0.142 Sum_probs=108.9
Q ss_pred EEeeeCceEEeeecCCC---C----CCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecC
Q 046579 126 VLQSCNGLLLCSSSRAY---Q----PRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCD 198 (416)
Q Consensus 126 ~~~s~~GLvl~~~~~~~---~----~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~ 198 (416)
-++..+|.|++..+... . -...++++||.|++|..+|+.+.++.. .+++. ++ -+|+.+....
T Consensus 51 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~----~~~~~-~~------~~iyv~GG~~ 119 (318)
T 2woz_A 51 SIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL----FGLGE-VD------DKIYVVAGKD 119 (318)
T ss_dssp EEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS----CEEEE-ET------TEEEEEEEEB
T ss_pred EEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc----cceEE-EC------CEEEEEcCcc
Confidence 34455666666654211 0 112389999999999999887764321 22111 11 1455555543
Q ss_pred C-CCCCceEEEEEECCCCCeeeccCCCccccccccCCcEEEccEEEEEeeC-------CcEEEEEcCCceEeecCCCCCC
Q 046579 199 S-LRDGHYQIEIYSSKTGPWRLSGGSFTAPSVINFRGGVFWNGAIHWVSTH-------GSSLYFDVDQEKLREMPMPPIP 270 (416)
Q Consensus 199 ~-~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~-------~~il~fD~~~e~~~~i~~P~~~ 270 (416)
. .......+++|+..+++|+..... +. .......+.++|.+|.+... ..+..||+.+++|+.++..+.+
T Consensus 120 ~~~~~~~~~~~~yd~~~~~W~~~~~~-p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 196 (318)
T 2woz_A 120 LQTEASLDSVLCYDPVAAKWSEVKNL-PI--KVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTP 196 (318)
T ss_dssp TTTCCEEEEEEEEETTTTEEEEECCC-SS--CEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSC
T ss_pred CCCCcccceEEEEeCCCCCEeECCCC-CC--cccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCC
Confidence 1 122345799999999999987521 11 12345567799999988652 2589999999999988432221
Q ss_pred CcccccceeEEEEeCCeEEEEEEecCCcCeEEEEEEeCCCCCceEEE
Q 046579 271 DEWEERRHQYFGESRGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKY 317 (416)
Q Consensus 271 ~~~~~~~~~~l~~~~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~ 317 (416)
... ...+..+|+|+++.........-.+|.++-...+|.+..
T Consensus 197 r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 238 (318)
T 2woz_A 197 RSM-----FGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMT 238 (318)
T ss_dssp CBS-----CEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECC
T ss_pred ccc-----ceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECC
Confidence 111 125567999999987654333457888887677898754
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.14 E-value=8.8e-09 Score=96.01 Aligned_cols=216 Identities=15% Similarity=0.149 Sum_probs=131.6
Q ss_pred eeeCceEEeeecC----C-CCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCC
Q 046579 128 QSCNGLLLCSSSR----A-YQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRD 202 (416)
Q Consensus 128 ~s~~GLvl~~~~~----~-~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~ 202 (416)
+..+|.|++..+. . ......++++||.|++|..+++++.++.. ..++ .++ + +|+.+...... .
T Consensus 67 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~----~~~~-~~~----~--~iyv~GG~~~~-~ 134 (308)
T 1zgk_A 67 CVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNR----IGVG-VID----G--HIYAVGGSHGC-I 134 (308)
T ss_dssp EEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBT----CEEE-EET----T--EEEEECCEETT-E
T ss_pred EEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccc----cEEE-EEC----C--EEEEEcCCCCC-c
Confidence 3446666666542 1 11124589999999999999987764432 1211 122 1 45555432211 1
Q ss_pred CceEEEEEECCCCCeeeccCCCccccccccCCcEEEccEEEEEeeC------CcEEEEEcCCceEeecCCCCCCCccccc
Q 046579 203 GHYQIEIYSSKTGPWRLSGGSFTAPSVINFRGGVFWNGAIHWVSTH------GSSLYFDVDQEKLREMPMPPIPDEWEER 276 (416)
Q Consensus 203 ~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~------~~il~fD~~~e~~~~i~~P~~~~~~~~~ 276 (416)
....+++|+..+++|+..... +. .......+.++|.+|.+... ..+..||+.+++|..++..+.+..
T Consensus 135 ~~~~~~~yd~~~~~W~~~~~~-p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---- 207 (308)
T 1zgk_A 135 HHNSVERYEPERDEWHLVAPM-LT--RRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRS---- 207 (308)
T ss_dssp ECCCEEEEETTTTEEEECCCC-SS--CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCB----
T ss_pred ccccEEEECCCCCeEeECCCC-Cc--cccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccc----
Confidence 123689999999999987532 11 12344567789999998653 368999999999998743222111
Q ss_pred ceeEEEEeCCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCC
Q 046579 277 RHQYFGESRGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREEN 356 (416)
Q Consensus 277 ~~~~l~~~~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (416)
....+..+++|+++.........-++|+++-...+|.+...+ |.-. .......+
T Consensus 208 -~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---------p~~r-----------~~~~~~~~----- 261 (308)
T 1zgk_A 208 -GAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPM---------KHRR-----------SALGITVH----- 261 (308)
T ss_dssp -SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCC---------SSCC-----------BSCEEEEE-----
T ss_pred -cceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCC---------CCCc-----------cceEEEEE-----
Confidence 113556699999987554333345688888766789865422 1110 11122222
Q ss_pred CCCcEEEEee------CCeEEEEEcCCCcEEEeeecCCC
Q 046579 357 DDDSYLVLHL------PKKAVRYNLKDRTFKKLHDVAPA 389 (416)
Q Consensus 357 ~~~~~i~l~~------~~~l~~ydl~~~~~~~v~~~~~~ 389 (416)
++.++++.. ...+..||+++++|+++..+..+
T Consensus 262 -~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 299 (308)
T 1zgk_A 262 -QGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSG 299 (308)
T ss_dssp -TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC
T ss_pred -CCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCCC
Confidence 244444432 35799999999999999887654
No 4
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.14 E-value=2.1e-08 Score=93.03 Aligned_cols=215 Identities=13% Similarity=0.108 Sum_probs=130.7
Q ss_pred eeeCceEEeeecCC-CCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceE
Q 046579 128 QSCNGLLLCSSSRA-YQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQ 206 (416)
Q Consensus 128 ~s~~GLvl~~~~~~-~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~ 206 (416)
+..+|.|++..+.. ......++++||.|++|..+|+++.++.. ..++. ++ + +++.+...... .....
T Consensus 58 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~----~~~~~-~~----~--~iyv~GG~~~~-~~~~~ 125 (302)
T 2xn4_A 58 VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRST----LGAAV-LN----G--LLYAVGGFDGS-TGLSS 125 (302)
T ss_dssp EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS----CEEEE-ET----T--EEEEEEEECSS-CEEEE
T ss_pred EEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccc----eEEEE-EC----C--EEEEEcCCCCC-ccCce
Confidence 34466666665432 11235689999999999999987764432 22211 21 1 45555543321 12347
Q ss_pred EEEEECCCCCeeeccCCCccccccccCCcEEEccEEEEEee--------CCcEEEEEcCCceEeecCCCCCCCcccccce
Q 046579 207 IEIYSSKTGPWRLSGGSFTAPSVINFRGGVFWNGAIHWVST--------HGSSLYFDVDQEKLREMPMPPIPDEWEERRH 278 (416)
Q Consensus 207 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~--------~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~ 278 (416)
+++|+..+++|+..... +. .......+.++|.+|-+.. ...+..||+.+++|+.+...+.+.. .
T Consensus 126 ~~~~d~~~~~W~~~~~~-p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-----~ 197 (302)
T 2xn4_A 126 VEAYNIKSNEWFHVAPM-NT--RRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRS-----G 197 (302)
T ss_dssp EEEEETTTTEEEEECCC-SS--CCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCB-----S
T ss_pred EEEEeCCCCeEeecCCC-CC--cccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccc-----c
Confidence 89999999999987432 11 1233456778999998864 2358999999999998743222111 1
Q ss_pred eEEEEeCCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCC
Q 046579 279 QYFGESRGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDD 358 (416)
Q Consensus 279 ~~l~~~~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (416)
..++..+++|+++.........-++|.++-....|.....+.. + . ...... +. +
T Consensus 198 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~-------~--r-----------~~~~~~-~~-----~ 251 (302)
T 2xn4_A 198 AGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNM-------C--R-----------RNAGVC-AV-----N 251 (302)
T ss_dssp CEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSS-------C--C-----------BSCEEE-EE-----T
T ss_pred ccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCC-------c--c-----------ccCeEE-EE-----C
Confidence 1356679999998765432223468888876678987643211 1 0 111222 22 2
Q ss_pred CcEEEEee------CCeEEEEEcCCCcEEEee-ecCC
Q 046579 359 DSYLVLHL------PKKAVRYNLKDRTFKKLH-DVAP 388 (416)
Q Consensus 359 ~~~i~l~~------~~~l~~ydl~~~~~~~v~-~~~~ 388 (416)
+.++++.. ...+..||+++++|+.+. .+..
T Consensus 252 ~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~ 288 (302)
T 2xn4_A 252 GLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMST 288 (302)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSS
T ss_pred CEEEEECCcCCCcccccEEEEcCCCCeEEECCcccCc
Confidence 44444432 246999999999999987 4543
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.12 E-value=3.3e-08 Score=92.34 Aligned_cols=152 Identities=9% Similarity=0.031 Sum_probs=100.2
Q ss_pred eEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecC--CCCCCceEEEEEECCCCCeeeccCCC
Q 046579 147 NYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCD--SLRDGHYQIEIYSSKTGPWRLSGGSF 224 (416)
Q Consensus 147 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~--~~~~~~~~~~vyss~t~~W~~~~~~~ 224 (416)
.++++||.|++|..+|+++.++. ...++ .++ -+|+.+.... ........+++|+..+++|+.....
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r~----~~~~~-~~~------~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~- 135 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPRC----LFGLG-EAL------NSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPL- 135 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCEE----SCEEE-EET------TEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCC-
T ss_pred ceEEecCCCCeEEECCCCCcchh----ceeEE-EEC------CEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCC-
Confidence 38999999999999988775322 12221 111 1455554432 1122344789999999999987531
Q ss_pred ccccccccCCcEEEccEEEEEeeC-------CcEEEEEcCCceEeecCCCCCCCcccccceeEEEEeCCeEEEEEEecCC
Q 046579 225 TAPSVINFRGGVFWNGAIHWVSTH-------GSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGESRGHLHLIEIYGPC 297 (416)
Q Consensus 225 ~~~~~~~~~~~v~~~G~lyw~~~~-------~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~~G~L~~v~~~~~~ 297 (416)
+. .......+.++|.+|.+... ..+..||+.+++|+.++..+.+ .. ....+..+|+|+++......
T Consensus 136 p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~---~~~~~~~~~~iyv~GG~~~~ 208 (315)
T 4asc_A 136 PY--VVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTA--RS---LFGATVHDGRIIVAAGVTDT 208 (315)
T ss_dssp SS--CCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSC--CB---SCEEEEETTEEEEEEEECSS
T ss_pred CC--cccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCc--hh---ceEEEEECCEEEEEeccCCC
Confidence 11 12345577899999998764 2589999999999987422211 11 11355679999999877544
Q ss_pred cCeEEEEEEeCCCCCceEEE
Q 046579 298 TALFNVYEMKTDYSGWFVKY 317 (416)
Q Consensus 298 ~~~l~iW~l~~~~~~W~~~~ 317 (416)
...-.+|+++-....|....
T Consensus 209 ~~~~~~~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 209 GLTSSAEVYSITDNKWAPFE 228 (315)
T ss_dssp SEEEEEEEEETTTTEEEEEC
T ss_pred CccceEEEEECCCCeEEECC
Confidence 33457899987677898764
No 6
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.09 E-value=3.2e-08 Score=91.64 Aligned_cols=215 Identities=11% Similarity=0.104 Sum_probs=131.0
Q ss_pred eeeCceEEeeecCC-CCCCceEEEEccCCcc---eEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCC
Q 046579 128 QSCNGLLLCSSSRA-YQPRRNYYVYNPTNKQ---YTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDG 203 (416)
Q Consensus 128 ~s~~GLvl~~~~~~-~~~~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~ 203 (416)
+..+|.|++..+.. ......++++||.|++ |..+++++.++.. ..++ .++ -+++.+...... ..
T Consensus 59 ~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~----~~~~-~~~------~~lyv~GG~~~~-~~ 126 (301)
T 2vpj_A 59 VSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGL----AGAT-TLG------DMIYVSGGFDGS-RR 126 (301)
T ss_dssp EEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBS----CEEE-EET------TEEEEECCBCSS-CB
T ss_pred EEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccc----eeEE-EEC------CEEEEEcccCCC-cc
Confidence 34566666555432 1223569999999999 9999887764322 2211 121 145555443321 12
Q ss_pred ceEEEEEECCCCCeeeccCCCccccccccCCcEEEccEEEEEeeC------CcEEEEEcCCceEeecCCCCCCCcccccc
Q 046579 204 HYQIEIYSSKTGPWRLSGGSFTAPSVINFRGGVFWNGAIHWVSTH------GSSLYFDVDQEKLREMPMPPIPDEWEERR 277 (416)
Q Consensus 204 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~------~~il~fD~~~e~~~~i~~P~~~~~~~~~~ 277 (416)
...+++|+..+++|+...... . .......+.++|.+|.+... ..+..||+.+++|+.+...+.+..
T Consensus 127 ~~~~~~~d~~~~~W~~~~~~p-~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~----- 198 (301)
T 2vpj_A 127 HTSMERYDPNIDQWSMLGDMQ-T--AREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRS----- 198 (301)
T ss_dssp CCEEEEEETTTTEEEEEEECS-S--CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCB-----
T ss_pred cceEEEEcCCCCeEEECCCCC-C--CcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccc-----
Confidence 347999999999999874211 1 12345567789999998653 368999999999998842222111
Q ss_pred eeEEEEeCCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCC
Q 046579 278 HQYFGESRGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREEND 357 (416)
Q Consensus 278 ~~~l~~~~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (416)
....+..+++|+++.........-+||.++-...+|.+...+ |.-. ...... +.
T Consensus 199 ~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---------p~~r-----------~~~~~~-~~----- 252 (301)
T 2vpj_A 199 GAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM---------TTPR-----------CYVGAT-VL----- 252 (301)
T ss_dssp SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC---------SSCC-----------BSCEEE-EE-----
T ss_pred cceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC---------CCcc-----------cceeEE-EE-----
Confidence 113556799999987654332245678888666789876432 1110 111222 22
Q ss_pred CCcEEEEee-C-----CeEEEEEcCCCcEEEeeecCC
Q 046579 358 DDSYLVLHL-P-----KKAVRYNLKDRTFKKLHDVAP 388 (416)
Q Consensus 358 ~~~~i~l~~-~-----~~l~~ydl~~~~~~~v~~~~~ 388 (416)
++.++++.. + ..+..||+++++|+.+..+..
T Consensus 253 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~ 289 (301)
T 2vpj_A 253 RGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGT 289 (301)
T ss_dssp TTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEE
T ss_pred CCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCc
Confidence 244444432 1 478999999999999987644
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.03 E-value=5.2e-08 Score=90.48 Aligned_cols=198 Identities=12% Similarity=0.053 Sum_probs=123.6
Q ss_pred CceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCCeeeccCCC
Q 046579 145 RRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGPWRLSGGSF 224 (416)
Q Consensus 145 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~ 224 (416)
...++++||.+++|..+++++.++.. ..++. ++ + +|+.+.... ......+++|+..+++|+......
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~----~~~~~-~~----~--~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRD----AACVF-WD----N--VVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBS----CEEEE-ET----T--EEEEECCBS--SSBCCEEEEEETTTTEEEEEECCS
T ss_pred CceEEEecCCCCCEecCCCCCcccce----eEEEE-EC----C--EEEEEeCCC--CCCcceEEEEeCCCCeEEECCCCC
Confidence 45689999999999999887764322 22111 21 1 355554433 223457999999999999874321
Q ss_pred ccccccccCCcEEEccEEEEEeeC-------CcEEEEEcCCceEeecCCCCCCCcccccceeEEEEeCCeEEEEEEecCC
Q 046579 225 TAPSVINFRGGVFWNGAIHWVSTH-------GSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGESRGHLHLIEIYGPC 297 (416)
Q Consensus 225 ~~~~~~~~~~~v~~~G~lyw~~~~-------~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~~G~L~~v~~~~~~ 297 (416)
. .......+.++|.+|.+... ..+..||+.+.+|..++..+.+.. . ...+..+|+|+++......
T Consensus 90 -~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~--~---~~~~~~~~~iyv~GG~~~~ 161 (306)
T 3ii7_A 90 -T--PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRC--S---HGMVEANGLIYVCGGSLGN 161 (306)
T ss_dssp -S--CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCB--S---CEEEEETTEEEEECCEESC
T ss_pred -c--cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcc--e---eEEEEECCEEEEECCCCCC
Confidence 1 12344567789999988653 258999999999998733222211 1 1355679999998765432
Q ss_pred cC----eEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEee------C
Q 046579 298 TA----LFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLHL------P 367 (416)
Q Consensus 298 ~~----~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~------~ 367 (416)
.. .-.+|.++-....|.+...+ |.-. ...... +. ++.++++.. .
T Consensus 162 ~~~~~~~~~~~~yd~~~~~W~~~~~~---------p~~r-----------~~~~~~-~~-----~~~i~v~GG~~~~~~~ 215 (306)
T 3ii7_A 162 NVSGRVLNSCEVYDPATETWTELCPM---------IEAR-----------KNHGLV-FV-----KDKIFAVGGQNGLGGL 215 (306)
T ss_dssp TTTCEECCCEEEEETTTTEEEEECCC---------SSCC-----------BSCEEE-EE-----TTEEEEECCEETTEEB
T ss_pred CCcccccceEEEeCCCCCeEEECCCc---------cchh-----------hcceEE-EE-----CCEEEEEeCCCCCCCC
Confidence 22 45688888766789876432 1111 111122 22 243444422 2
Q ss_pred CeEEEEEcCCCcEEEeeecCCC
Q 046579 368 KKAVRYNLKDRTFKKLHDVAPA 389 (416)
Q Consensus 368 ~~l~~ydl~~~~~~~v~~~~~~ 389 (416)
..+..||+++++|+.+..+...
T Consensus 216 ~~~~~yd~~~~~W~~~~~~p~~ 237 (306)
T 3ii7_A 216 DNVEYYDIKLNEWKMVSPMPWK 237 (306)
T ss_dssp CCEEEEETTTTEEEECCCCSCC
T ss_pred ceEEEeeCCCCcEEECCCCCCC
Confidence 5799999999999999876543
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.00 E-value=3.8e-08 Score=91.68 Aligned_cols=201 Identities=13% Similarity=0.101 Sum_probs=121.4
Q ss_pred CceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecC---CCCCCceEEEEEECCCCCeeecc
Q 046579 145 RRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCD---SLRDGHYQIEIYSSKTGPWRLSG 221 (416)
Q Consensus 145 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~---~~~~~~~~~~vyss~t~~W~~~~ 221 (416)
...++++||.|++|..+++++.++.. ..++ ..+ -+|+.+.... ........+++|+..+++|+...
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r~~----~~~~-~~~------~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 106 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPRSG----LAGC-VVG------GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCA 106 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBS----CEEE-EET------TEEEEECCEEEETTEEEECCCEEEEETTTTEEEECC
T ss_pred cceEEEEcCCCCeEeECCCCCccccc----ceEE-EEC------CEEEEECCCcCCCCCCeecceEEEECCCCCeEeECC
Confidence 45699999999999999887764332 1211 111 1344443321 10011236899999999999875
Q ss_pred CCCccccccccCCcEEEccEEEEEeeC------CcEEEEEcCCceEeecCCCCCCCcccccceeEEEEeCCeEEEEEEec
Q 046579 222 GSFTAPSVINFRGGVFWNGAIHWVSTH------GSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGESRGHLHLIEIYG 295 (416)
Q Consensus 222 ~~~~~~~~~~~~~~v~~~G~lyw~~~~------~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~~G~L~~v~~~~ 295 (416)
.. +. .......+.++|.+|.+... ..+..||+.+.+|..++..+.+.. . ...+..+++|+++....
T Consensus 107 ~~-p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~--~---~~~~~~~~~iyv~GG~~ 178 (308)
T 1zgk_A 107 PM-SV--PRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRI--G---VGVAVLNRLLYAVGGFD 178 (308)
T ss_dssp CC-SS--CCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCB--S---CEEEEETTEEEEECCBC
T ss_pred CC-Cc--CccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcccc--c---eEEEEECCEEEEEeCCC
Confidence 31 11 12334567789999988642 368999999999998743222111 1 12455699999987654
Q ss_pred CCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEee------CCe
Q 046579 296 PCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLHL------PKK 369 (416)
Q Consensus 296 ~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~------~~~ 369 (416)
.....-.+|.++-...+|.+...+ |.-. ...... +. ++.++++.. ...
T Consensus 179 ~~~~~~~~~~yd~~~~~W~~~~~~---------p~~r-----------~~~~~~-~~-----~~~iyv~GG~~~~~~~~~ 232 (308)
T 1zgk_A 179 GTNRLNSAECYYPERNEWRMITAM---------NTIR-----------SGAGVC-VL-----HNCIYAAGGYDGQDQLNS 232 (308)
T ss_dssp SSCBCCCEEEEETTTTEEEECCCC---------SSCC-----------BSCEEE-EE-----TTEEEEECCBCSSSBCCC
T ss_pred CCCcCceEEEEeCCCCeEeeCCCC---------CCcc-----------ccceEE-EE-----CCEEEEEeCCCCCCccce
Confidence 332344678888666789865422 1111 111222 22 244444432 268
Q ss_pred EEEEEcCCCcEEEeeecCCCC
Q 046579 370 AVRYNLKDRTFKKLHDVAPAG 390 (416)
Q Consensus 370 l~~ydl~~~~~~~v~~~~~~~ 390 (416)
+..||+++++|+++..+..++
T Consensus 233 v~~yd~~~~~W~~~~~~p~~r 253 (308)
T 1zgk_A 233 VERYDVETETWTFVAPMKHRR 253 (308)
T ss_dssp EEEEETTTTEEEECCCCSSCC
T ss_pred EEEEeCCCCcEEECCCCCCCc
Confidence 999999999999998765543
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.97 E-value=1e-07 Score=88.29 Aligned_cols=199 Identities=12% Similarity=0.157 Sum_probs=122.8
Q ss_pred CceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCC---eeecc
Q 046579 145 RRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGP---WRLSG 221 (416)
Q Consensus 145 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~---W~~~~ 221 (416)
...++++||.|++|..+++++.++.. ..++ ..+ -+|+.+..... ......+++|+..+++ |+...
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~----~~~~-~~~------~~l~v~GG~~~-~~~~~~~~~~d~~~~~~~~W~~~~ 97 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRY----VASV-SLH------DRIYVIGGYDG-RSRLSSVECLDYTADEDGVWYSVA 97 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBS----CEEE-EET------TEEEEECCBCS-SCBCCCEEEEETTCCTTCCCEEEC
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhcc----ccEE-EEC------CEEEEEcCCCC-CccCceEEEEECCCCCCCeeEECC
Confidence 34689999999999999977654321 2211 111 14555544331 1123468999999999 99874
Q ss_pred CCCccccccccCCcEEEccEEEEEeeC------CcEEEEEcCCceEeecCCCCCCCcccccceeEEEEeCCeEEEEEEec
Q 046579 222 GSFTAPSVINFRGGVFWNGAIHWVSTH------GSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGESRGHLHLIEIYG 295 (416)
Q Consensus 222 ~~~~~~~~~~~~~~v~~~G~lyw~~~~------~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~~G~L~~v~~~~ 295 (416)
.. +. .......+.++|.+|.+... ..+..||+.+.+|..++..+.+ ... ...+..+|+|+++....
T Consensus 98 ~~-p~--~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~---~~~~~~~~~iyv~GG~~ 169 (301)
T 2vpj_A 98 PM-NV--RRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA--REG---AGLVVASGVIYCLGGYD 169 (301)
T ss_dssp CC-SS--CCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC--CBS---CEEEEETTEEEEECCBC
T ss_pred CC-CC--CccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCC--ccc---ceEEEECCEEEEECCCC
Confidence 31 11 12344567789999998753 3589999999999987422211 111 12456699999986654
Q ss_pred CCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEee------CCe
Q 046579 296 PCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLHL------PKK 369 (416)
Q Consensus 296 ~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~------~~~ 369 (416)
.....-.+|.++-....|.+...+ |.-. .......+ ++.++++.. ...
T Consensus 170 ~~~~~~~~~~~d~~~~~W~~~~~~---------p~~r-----------~~~~~~~~------~~~i~v~GG~~~~~~~~~ 223 (301)
T 2vpj_A 170 GLNILNSVEKYDPHTGHWTNVTPM---------ATKR-----------SGAGVALL------NDHIYVVGGFDGTAHLSS 223 (301)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCC---------SSCC-----------BSCEEEEE------TTEEEEECCBCSSSBCCC
T ss_pred CCcccceEEEEeCCCCcEEeCCCC---------Cccc-----------ccceEEEE------CCEEEEEeCCCCCcccce
Confidence 333345678888666789876422 1111 11112222 244444432 357
Q ss_pred EEEEEcCCCcEEEeeecCCC
Q 046579 370 AVRYNLKDRTFKKLHDVAPA 389 (416)
Q Consensus 370 l~~ydl~~~~~~~v~~~~~~ 389 (416)
+..||+++++|+++..+..+
T Consensus 224 v~~yd~~~~~W~~~~~~p~~ 243 (301)
T 2vpj_A 224 VEAYNIRTDSWTTVTSMTTP 243 (301)
T ss_dssp EEEEETTTTEEEEECCCSSC
T ss_pred EEEEeCCCCcEEECCCCCCc
Confidence 99999999999999876543
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.97 E-value=1.4e-07 Score=87.30 Aligned_cols=200 Identities=13% Similarity=0.126 Sum_probs=122.3
Q ss_pred CceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCCeeeccCCC
Q 046579 145 RRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGPWRLSGGSF 224 (416)
Q Consensus 145 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~ 224 (416)
...++++||.+++|..+++.+.++.. ..++ .++ -+|+.+...... .....+++|+..+++|+......
T Consensus 29 ~~~~~~~d~~~~~W~~~~~~p~~r~~----~~~~-~~~------~~lyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p 96 (302)
T 2xn4_A 29 IRSVECYDFKEERWHQVAELPSRRCR----AGMV-YMA------GLVFAVGGFNGS-LRVRTVDSYDPVKDQWTSVANMR 96 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBS----CEEE-EET------TEEEEESCBCSS-SBCCCEEEEETTTTEEEEECCCS
T ss_pred CCcEEEEcCcCCcEeEcccCCccccc----ceEE-EEC------CEEEEEeCcCCC-ccccceEEECCCCCceeeCCCCC
Confidence 35589999999999999877754322 1211 111 234444443211 12346899999999999875311
Q ss_pred ccccccccCCcEEEccEEEEEeeCC------cEEEEEcCCceEeecCCCCCCCcccccceeEEEEeCCeEEEEEEecCCc
Q 046579 225 TAPSVINFRGGVFWNGAIHWVSTHG------SSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGESRGHLHLIEIYGPCT 298 (416)
Q Consensus 225 ~~~~~~~~~~~v~~~G~lyw~~~~~------~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~~G~L~~v~~~~~~~ 298 (416)
. .......+.++|.+|-+.... .+..||+.+.+|..++..+.+.. . ...+..+|+|+++.......
T Consensus 97 -~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~--~---~~~~~~~~~iyv~GG~~~~~ 168 (302)
T 2xn4_A 97 -D--RRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRS--S---VGVGVVGGLLYAVGGYDVAS 168 (302)
T ss_dssp -S--CCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCB--S---CEEEEETTEEEEECCEETTT
T ss_pred -c--cccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCccc--C---ceEEEECCEEEEEeCCCCCC
Confidence 1 123345677899999887532 47899999999998743222211 1 13556799999987553321
Q ss_pred --CeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEee------CCeE
Q 046579 299 --ALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLHL------PKKA 370 (416)
Q Consensus 299 --~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~------~~~l 370 (416)
..-.+|.++-....|.+...+ |.-. ...... +. ++.++++.. ...+
T Consensus 169 ~~~~~~~~~yd~~~~~W~~~~~~---------p~~r-----------~~~~~~-~~-----~~~iyv~GG~~~~~~~~~~ 222 (302)
T 2xn4_A 169 RQCLSTVECYNATTNEWTYIAEM---------STRR-----------SGAGVG-VL-----NNLLYAVGGHDGPLVRKSV 222 (302)
T ss_dssp TEECCCEEEEETTTTEEEEECCC---------SSCC-----------BSCEEE-EE-----TTEEEEECCBSSSSBCCCE
T ss_pred CccccEEEEEeCCCCcEEECCCC---------cccc-----------ccccEE-EE-----CCEEEEECCCCCCcccceE
Confidence 133578888666789876432 1111 111122 22 244444432 2579
Q ss_pred EEEEcCCCcEEEeeecCCCC
Q 046579 371 VRYNLKDRTFKKLHDVAPAG 390 (416)
Q Consensus 371 ~~ydl~~~~~~~v~~~~~~~ 390 (416)
..||+++++|+.+..+..++
T Consensus 223 ~~yd~~~~~W~~~~~~~~~r 242 (302)
T 2xn4_A 223 EVYDPTTNAWRQVADMNMCR 242 (302)
T ss_dssp EEEETTTTEEEEECCCSSCC
T ss_pred EEEeCCCCCEeeCCCCCCcc
Confidence 99999999999998765543
No 11
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.97 E-value=4.3e-10 Score=75.51 Aligned_cols=41 Identities=34% Similarity=0.486 Sum_probs=37.8
Q ss_pred ccccCCHHHHHHHHccCChhhhhhhhcchHhHhhhhcCccc
Q 046579 30 ETIINNDDLLTEILLCLPIKSLLKFKAVSKHWLSLISNPIF 70 (416)
Q Consensus 30 ~~~~LPddll~eIL~rLP~~~l~r~~~VcK~W~~li~s~~F 70 (416)
....||+|++.+||++||++++.++++|||+|+.++.++.|
T Consensus 8 ~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~l 48 (53)
T 1fs1_A 8 SWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (53)
T ss_dssp -CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGG
T ss_pred CHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHH
Confidence 45679999999999999999999999999999999998876
No 12
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.78 E-value=2e-09 Score=98.28 Aligned_cols=43 Identities=21% Similarity=0.270 Sum_probs=40.4
Q ss_pred cccccCCHHHHHHHHccCChhhhh-hhhcchHhHhhhhcCcccc
Q 046579 29 VETIINNDDLLTEILLCLPIKSLL-KFKAVSKHWLSLISNPIFS 71 (416)
Q Consensus 29 ~~~~~LPddll~eIL~rLP~~~l~-r~~~VcK~W~~li~s~~F~ 71 (416)
..+..||+||+.+||++||+++|+ ||++|||+|++|+.++.|.
T Consensus 49 ~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w 92 (297)
T 2e31_A 49 EYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLW 92 (297)
T ss_dssp CCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHH
T ss_pred cChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHH
Confidence 345689999999999999999999 9999999999999999997
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.75 E-value=6.4e-07 Score=84.97 Aligned_cols=171 Identities=13% Similarity=0.054 Sum_probs=101.6
Q ss_pred EeeeCceEEeeecCCCCCCceEEEEccC--CcceEecCCCC-cCCCcceeeeeEEEEeCCCCCCCeEEEEEEec-C--C-
Q 046579 127 LQSCNGLLLCSSSRAYQPRRNYYVYNPT--NKQYTILPRLH-VDRGIFRSIFGVNLAFDPSKSAHYKVICVRNC-D--S- 199 (416)
Q Consensus 127 ~~s~~GLvl~~~~~~~~~~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~-~--~- 199 (416)
.+..+|.|.+..+. ....++++||. +++|..+++.+ .++.. .+++ .++ + +|+.+... . .
T Consensus 15 ~~~~~~~iyv~GG~---~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~----~~~~-~~~----~--~lyv~GG~~~~~~~ 80 (357)
T 2uvk_A 15 GAIDNDTVYIGLGS---AGTAWYKLDTQAKDKKWTALAAFPGGPRDQ----ATSA-FID----G--NLYVFGGIGKNSEG 80 (357)
T ss_dssp EEEETTEEEEECGG---GTTCEEEEETTSSSCCEEECCCCTTCCCBS----CEEE-EET----T--EEEEECCEEECTTS
T ss_pred EEEECCEEEEEeCc---CCCeEEEEccccCCCCeeECCCCCCCcCcc----ceEE-EEC----C--EEEEEcCCCCCCCc
Confidence 33447777776653 23469999998 49999998876 43321 2211 122 1 35544443 1 0
Q ss_pred CCCCceEEEEEECCCCCeeeccCCCccccccccCCcEEEccEEEEEeeC-------------------------------
Q 046579 200 LRDGHYQIEIYSSKTGPWRLSGGSFTAPSVINFRGGVFWNGAIHWVSTH------------------------------- 248 (416)
Q Consensus 200 ~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~------------------------------- 248 (416)
.......+++|+..+++|+.+....+. .......+.++|.+|.+...
T Consensus 81 ~~~~~~~v~~yd~~~~~W~~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (357)
T 2uvk_A 81 LTQVFNDVHKYNPKTNSWVKLMSHAPM--GMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFD 158 (357)
T ss_dssp CEEECCCEEEEETTTTEEEECSCCCSS--CCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred cceeeccEEEEeCCCCcEEECCCCCCc--ccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcc
Confidence 011223689999999999987532211 11233456799999998753
Q ss_pred ---------CcEEEEEcCCceEeecC-CCCCCCcccccceeEEEEeCCeEEEEEEecCC-cCeEEEEEEeC--CCCCceE
Q 046579 249 ---------GSSLYFDVDQEKLREMP-MPPIPDEWEERRHQYFGESRGHLHLIEIYGPC-TALFNVYEMKT--DYSGWFV 315 (416)
Q Consensus 249 ---------~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~l~~~~G~L~~v~~~~~~-~~~l~iW~l~~--~~~~W~~ 315 (416)
..+..||+.+.+|+.+. +|.... . ...++..+++|+++...... ...-++|.++- ....|.+
T Consensus 159 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~-~----~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~ 233 (357)
T 2uvk_A 159 KKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGT-A----GAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNK 233 (357)
T ss_dssp SCGGGGCCCCEEEEEETTTTEEEEEEECSSCCC-B----SCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEE
T ss_pred ccccccCCcccEEEEeCCCCcEEECCCCCCCCc-c----cccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEe
Confidence 36899999999999873 332111 1 02356679999998643221 12345677663 4567986
Q ss_pred EEE
Q 046579 316 KYR 318 (416)
Q Consensus 316 ~~~ 318 (416)
...
T Consensus 234 ~~~ 236 (357)
T 2uvk_A 234 LAP 236 (357)
T ss_dssp CCC
T ss_pred cCC
Confidence 543
No 14
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.67 E-value=2.3e-06 Score=79.63 Aligned_cols=171 Identities=13% Similarity=0.094 Sum_probs=109.7
Q ss_pred EeeeCceEEeeecCC----CCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCC
Q 046579 127 LQSCNGLLLCSSSRA----YQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRD 202 (416)
Q Consensus 127 ~~s~~GLvl~~~~~~----~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~ 202 (416)
.+..+|.|.+..+.. ......++++||.|++|..+++++.++.. ..++ .++ + +++.+........
T Consensus 94 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~----~~~~-~~~----~--~iyv~GG~~~~~~ 162 (315)
T 4asc_A 94 LGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG----HTVL-SHM----D--LVYVIGGKGSDRK 162 (315)
T ss_dssp EEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS----CEEE-EET----T--EEEEECCBCTTSC
T ss_pred EEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc----eeEE-EEC----C--EEEEEeCCCCCCc
Confidence 344577766665531 12235699999999999999887764322 1211 122 1 4666655422222
Q ss_pred CceEEEEEECCCCCeeeccCCCccccccccCCcEEEccEEEEEeeCC------cEEEEEcCCceEeecCCCCCCCccccc
Q 046579 203 GHYQIEIYSSKTGPWRLSGGSFTAPSVINFRGGVFWNGAIHWVSTHG------SSLYFDVDQEKLREMPMPPIPDEWEER 276 (416)
Q Consensus 203 ~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~------~il~fD~~~e~~~~i~~P~~~~~~~~~ 276 (416)
....+++|+..+++|+.+... +. ......++.++|.+|.+.... .+.+||+.+++|..+...+.+..
T Consensus 163 ~~~~~~~yd~~~~~W~~~~~~-p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---- 235 (315)
T 4asc_A 163 CLNKMCVYDPKKFEWKELAPM-QT--ARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERS---- 235 (315)
T ss_dssp BCCCEEEEETTTTEEEECCCC-SS--CCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCB----
T ss_pred ccceEEEEeCCCCeEEECCCC-CC--chhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCccc----
Confidence 345799999999999987531 11 123455778899999887532 58899999999998853222211
Q ss_pred ceeEEEEeCCeEEEEEEecCC---------cCeEEEEEEeCCCCCceEE
Q 046579 277 RHQYFGESRGHLHLIEIYGPC---------TALFNVYEMKTDYSGWFVK 316 (416)
Q Consensus 277 ~~~~l~~~~G~L~~v~~~~~~---------~~~l~iW~l~~~~~~W~~~ 316 (416)
...++..+|+|+++...... ...-+||+++-...+|++.
T Consensus 236 -~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 236 -SLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp -SCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred -ceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 11356679999999875321 1235789999767789877
No 15
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.65 E-value=2.8e-06 Score=79.18 Aligned_cols=199 Identities=11% Similarity=0.052 Sum_probs=115.7
Q ss_pred eEEEEccCCcceEecCCCC-cCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCC-----CCCceEEEEEECCCCCeeec
Q 046579 147 NYYVYNPTNKQYTILPRLH-VDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSL-----RDGHYQIEIYSSKTGPWRLS 220 (416)
Q Consensus 147 ~~~V~NP~T~~~~~LP~~~-~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~-----~~~~~~~~vyss~t~~W~~~ 220 (416)
...++||.|++|...|.+. .++. ... ... ..-+|+.+...... ......+++|+..+++|+..
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~----~~~--~~~-----~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 93 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRN----HSS--IVT-----QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGL 93 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSS----EEE--EEC-----SSSCEEEEESSCC-------CCCBEEEEEETTTTEEEEC
T ss_pred ceEEECCCCCceecccCCccCCcc----ceE--EEE-----ECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEEC
Confidence 4789999999999854332 1111 122 111 11234555542111 01122489999999999987
Q ss_pred cCCCccccccccCCcEEEccEEEEEeeC--------CcEEEEEcCCceEeecCCCCCCCcccccceeEEEEeCCeEEEEE
Q 046579 221 GGSFTAPSVINFRGGVFWNGAIHWVSTH--------GSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGESRGHLHLIE 292 (416)
Q Consensus 221 ~~~~~~~~~~~~~~~v~~~G~lyw~~~~--------~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~~G~L~~v~ 292 (416)
... +. .-.....+.++|.+|.+... ..+..||+.+.+|+.+...+.+ ... ...+..+|+|+++.
T Consensus 94 ~~~-p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~---~~~~~~~~~iyv~G 165 (318)
T 2woz_A 94 PPL-PS--ARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIK--VYG---HNVISHNGMIYCLG 165 (318)
T ss_dssp SCB-SS--CBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSC--EES---CEEEEETTEEEEEC
T ss_pred CCC-Cc--cccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCc--ccc---cEEEEECCEEEEEc
Confidence 421 11 11334567789999988753 1478999999999987422221 111 12455799999986
Q ss_pred EecCC-cCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEee-----
Q 046579 293 IYGPC-TALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLHL----- 366 (416)
Q Consensus 293 ~~~~~-~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~----- 366 (416)
..... ...-++|.++-...+|.+...+ |.-. ..... ++. ++.++++..
T Consensus 166 G~~~~~~~~~~~~~yd~~~~~W~~~~~~---------p~~r-----------~~~~~-~~~-----~~~iyv~GG~~~~~ 219 (318)
T 2woz_A 166 GKTDDKKCTNRVFIYNPKKGDWKDLAPM---------KTPR-----------SMFGV-AIH-----KGKIVIAGGVTEDG 219 (318)
T ss_dssp CEESSSCBCCCEEEEETTTTEEEEECCC---------SSCC-----------BSCEE-EEE-----TTEEEEEEEEETTE
T ss_pred CCCCCCCccceEEEEcCCCCEEEECCCC---------CCCc-----------ccceE-EEE-----CCEEEEEcCcCCCC
Confidence 54221 1234588888767789876432 1111 11112 222 244444432
Q ss_pred -CCeEEEEEcCCCcEEEeeecCCCC
Q 046579 367 -PKKAVRYNLKDRTFKKLHDVAPAG 390 (416)
Q Consensus 367 -~~~l~~ydl~~~~~~~v~~~~~~~ 390 (416)
...+..||+++++|+.+..+..++
T Consensus 220 ~~~~~~~yd~~~~~W~~~~~~p~~r 244 (318)
T 2woz_A 220 LSASVEAFDLKTNKWEVMTEFPQER 244 (318)
T ss_dssp EEEEEEEEETTTCCEEECCCCSSCC
T ss_pred ccceEEEEECCCCeEEECCCCCCcc
Confidence 247889999999999998765543
No 16
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.61 E-value=7.6e-06 Score=77.49 Aligned_cols=217 Identities=13% Similarity=0.022 Sum_probs=120.4
Q ss_pred EeeeCceEEeeecC-C-----CCCCceEEEEccCCcceEecCCCC-cCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCC
Q 046579 127 LQSCNGLLLCSSSR-A-----YQPRRNYYVYNPTNKQYTILPRLH-VDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDS 199 (416)
Q Consensus 127 ~~s~~GLvl~~~~~-~-----~~~~~~~~V~NP~T~~~~~LP~~~-~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~ 199 (416)
.+..+|.|.+..+. . ......++++||.|++|..+++.+ ..+. ...+.. ++ + +|+.+.....
T Consensus 61 ~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~----~~~~~~-~~----~--~iyv~GG~~~ 129 (357)
T 2uvk_A 61 SAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMA----GHVTFV-HN----G--KAYVTGGVNQ 129 (357)
T ss_dssp EEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCS----SEEEEE-ET----T--EEEEEECCCH
T ss_pred EEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccc----cceEEE-EC----C--EEEEEeCcCC
Confidence 33456776666543 1 011245899999999999998866 3221 122111 22 1 4555554321
Q ss_pred CC---------------------------------CCceEEEEEECCCCCeeeccCCCccccccccCCcEEEccEEEEEe
Q 046579 200 LR---------------------------------DGHYQIEIYSSKTGPWRLSGGSFTAPSVINFRGGVFWNGAIHWVS 246 (416)
Q Consensus 200 ~~---------------------------------~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lyw~~ 246 (416)
.. .....+++|+..+++|+.+... +.+ .......+.++|.+|.+.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~-~~~~~~~~~~~~~iyv~G 207 (357)
T 2uvk_A 130 NIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGES-PWY-GTAGAAVVNKGDKTWLIN 207 (357)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEEC-SSC-CCBSCEEEEETTEEEEEC
T ss_pred CcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCC-CCC-CcccccEEEECCEEEEEe
Confidence 10 0124899999999999987421 111 112256777899999886
Q ss_pred e-------CCcEEEEEc--CCceEeecCCCCCCCcccccceeEEEEeCCeEEEEEEecCC-----------------cCe
Q 046579 247 T-------HGSSLYFDV--DQEKLREMPMPPIPDEWEERRHQYFGESRGHLHLIEIYGPC-----------------TAL 300 (416)
Q Consensus 247 ~-------~~~il~fD~--~~e~~~~i~~P~~~~~~~~~~~~~l~~~~G~L~~v~~~~~~-----------------~~~ 300 (416)
. ...+..||+ .+.+|+.+...+.+.... ....+..+|+|+++...... ...
T Consensus 208 G~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~---~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~ 284 (357)
T 2uvk_A 208 GEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVA---GGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKS 284 (357)
T ss_dssp CEEETTEECCCEEEEECC---CEEEECCCSSTTTCCB---SCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCE
T ss_pred eecCCCcccCceEEEEecCCCCcEEecCCCCCCcccc---cceEEEECCEEEEEcCccccCCcccccccceeccccccce
Confidence 4 235788887 889999874322221111 12356779999998754211 112
Q ss_pred EEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEee-C------CeEEEE
Q 046579 301 FNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLHL-P------KKAVRY 373 (416)
Q Consensus 301 l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~-~------~~l~~y 373 (416)
-.+|+++-...+|.+...++. | . .....+.+ ++.++++.. + ..++.+
T Consensus 285 ~~~~~yd~~~~~W~~~~~~p~-------~--r-----------~~~~~~~~------~~~i~v~GG~~~~~~~~~~v~~l 338 (357)
T 2uvk_A 285 YSTDIHLWHNGKWDKSGELSQ-------G--R-----------AYGVSLPW------NNSLLIIGGETAGGKAVTDSVLI 338 (357)
T ss_dssp ECCEEEECC---CEEEEECSS-------C--C-----------BSSEEEEE------TTEEEEEEEECGGGCEEEEEEEE
T ss_pred eeEEEEecCCCceeeCCCCCC-------C--c-----------ccceeEEe------CCEEEEEeeeCCCCCEeeeEEEE
Confidence 467777766678998754321 1 1 11112212 344555533 1 368889
Q ss_pred EcCCCcEEEeee
Q 046579 374 NLKDRTFKKLHD 385 (416)
Q Consensus 374 dl~~~~~~~v~~ 385 (416)
++++++|.+...
T Consensus 339 ~~~~~~~~~~~~ 350 (357)
T 2uvk_A 339 TVKDNKVTVQNL 350 (357)
T ss_dssp EC-CCSCEEEC-
T ss_pred EEcCcEeEeeec
Confidence 999999988764
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.47 E-value=1.2e-05 Score=83.34 Aligned_cols=176 Identities=9% Similarity=-0.001 Sum_probs=98.5
Q ss_pred eCceEEeeecCCCCCCceEEEEccCCcceEecC-C-----CCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCC
Q 046579 130 CNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILP-R-----LHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDG 203 (416)
Q Consensus 130 ~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP-~-----~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~ 203 (416)
.+|.|++..+........++++||.|++|..++ + .+.++. ...+ ..+.. .-+|+.+.+.......
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~----~hs~-~~~~~----~~~lyv~GG~~~~~~~ 466 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARM----CHTF-TTISR----NNQLLLIGGRKAPHQG 466 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCB----SCEE-EEETT----TTEEEEECCBSSTTCB
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCcccc----ceEE-EEEcc----CCEEEEEcCCCCCCCc
Confidence 566666665432223456999999999999998 5 222221 1221 11210 1235556554332212
Q ss_pred ceEEEEEECCCCCeeeccCCCccccccccCCcEEE-ccEEEEEeeCC---cEEEEEcCCceEeecCCCC-CCCcccccce
Q 046579 204 HYQIEIYSSKTGPWRLSGGSFTAPSVINFRGGVFW-NGAIHWVSTHG---SSLYFDVDQEKLREMPMPP-IPDEWEERRH 278 (416)
Q Consensus 204 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~-~G~lyw~~~~~---~il~fD~~~e~~~~i~~P~-~~~~~~~~~~ 278 (416)
...+++|+..+++|+..... +. ......++.+ +|.+|.+.... .+..||+.+++|+.+.... .|.......
T Consensus 467 ~~dv~~yd~~t~~W~~~~~~-p~--~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~- 542 (695)
T 2zwa_A 467 LSDNWIFDMKTREWSMIKSL-SH--TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSA- 542 (695)
T ss_dssp CCCCEEEETTTTEEEECCCC-SB--CCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSC-
T ss_pred cccEEEEeCCCCcEEECCCC-CC--CcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCccccee-
Confidence 34689999999999987431 11 1123345554 99999887543 6999999999999886311 111111111
Q ss_pred eEEEEeC-CeEEEEEEecCC--cCeEEEEEEeCCCCC------ceEEEE
Q 046579 279 QYFGESR-GHLHLIEIYGPC--TALFNVYEMKTDYSG------WFVKYR 318 (416)
Q Consensus 279 ~~l~~~~-G~L~~v~~~~~~--~~~l~iW~l~~~~~~------W~~~~~ 318 (416)
..+...+ |+|+++.....+ ...-.+|.++-.... |.+...
T Consensus 543 a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 543 GLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp EEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred EEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC
Confidence 1111222 889998765322 123356666644455 666554
No 18
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.28 E-value=0.00027 Score=68.66 Aligned_cols=41 Identities=20% Similarity=0.253 Sum_probs=37.6
Q ss_pred cccCCHHHHHHHHccCChhhhhhhhcchHhHhhhhcCcccc
Q 046579 31 TIINNDDLLTEILLCLPIKSLLKFKAVSKHWLSLISNPIFS 71 (416)
Q Consensus 31 ~~~LPddll~eIL~rLP~~~l~r~~~VcK~W~~li~s~~F~ 71 (416)
...||+|++..||+.|++++|.++++|||+|+.++.++.+-
T Consensus 19 ~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w 59 (445)
T 2ovr_B 19 ISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLW 59 (445)
T ss_dssp TTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHH
T ss_pred hHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHh
Confidence 45699999999999999999999999999999999987654
No 19
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.25 E-value=0.0041 Score=60.32 Aligned_cols=36 Identities=17% Similarity=0.284 Sum_probs=34.6
Q ss_pred ccCCHHHHHHHHccCChhhhhhhhcchHhHhhhhcC
Q 046579 32 IINNDDLLTEILLCLPIKSLLKFKAVSKHWLSLISN 67 (416)
Q Consensus 32 ~~LPddll~eIL~rLP~~~l~r~~~VcK~W~~li~s 67 (416)
..||+|++.+||+.||+++|++++.|||+|+.++.+
T Consensus 16 ~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~ 51 (464)
T 3v7d_B 16 TSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRK 51 (464)
T ss_dssp HHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTT
T ss_pred HHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcC
Confidence 469999999999999999999999999999999998
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.16 E-value=0.00025 Score=68.77 Aligned_cols=39 Identities=26% Similarity=0.336 Sum_probs=35.9
Q ss_pred ccCCHH----HHHHHHccCChhhhhhhhcchHhHhhhhcCccc
Q 046579 32 IINNDD----LLTEILLCLPIKSLLKFKAVSKHWLSLISNPIF 70 (416)
Q Consensus 32 ~~LPdd----ll~eIL~rLP~~~l~r~~~VcK~W~~li~s~~F 70 (416)
..||+| |+..||+.|++++|.++++|||+|+.++.++.+
T Consensus 12 ~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~ 54 (435)
T 1p22_A 12 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGML 54 (435)
T ss_dssp HHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTH
T ss_pred HHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHH
Confidence 459999 999999999999999999999999999987653
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.94 E-value=0.00021 Score=73.52 Aligned_cols=227 Identities=11% Similarity=0.015 Sum_probs=119.3
Q ss_pred EEeeeCceEEeeecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCce
Q 046579 126 VLQSCNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHY 205 (416)
Q Consensus 126 ~~~s~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~ 205 (416)
.....+|.|++..+. ....+.++||.|++|..+++++..+.. ...+ .+ + +=||+.+...........
T Consensus 248 ~~~~~~g~lyv~GG~---~~~~v~~yd~~t~~W~~~~~~~~~R~~----~s~~-~~-~----dg~iyv~GG~~~~~~~~~ 314 (656)
T 1k3i_A 248 ISMDGNGQIVVTGGN---DAKKTSLYDSSSDSWIPGPDMQVARGY----QSSA-TM-S----DGRVFTIGGSWSGGVFEK 314 (656)
T ss_dssp EEECTTSCEEEECSS---STTCEEEEEGGGTEEEECCCCSSCCSS----CEEE-EC-T----TSCEEEECCCCCSSSCCC
T ss_pred ccCCCCCCEEEeCCC---CCCceEEecCcCCceeECCCCCccccc----cceE-Ee-c----CCeEEEEeCcccCCcccc
Confidence 334467877777653 234699999999999999987764321 2211 11 1 124555554222111234
Q ss_pred EEEEEECCCCCeeeccCC--CccccccccCCcEEEccEEEEEee----------CCcEEEEEcCCceEeecCCCCCCC--
Q 046579 206 QIEIYSSKTGPWRLSGGS--FTAPSVINFRGGVFWNGAIHWVST----------HGSSLYFDVDQEKLREMPMPPIPD-- 271 (416)
Q Consensus 206 ~~~vyss~t~~W~~~~~~--~~~~~~~~~~~~v~~~G~lyw~~~----------~~~il~fD~~~e~~~~i~~P~~~~-- 271 (416)
.+++|+..+++|+.+... .+.. .......+..+|.+|.+.. ...+..||+.+++|.....+ .+.
T Consensus 315 ~~e~yd~~t~~W~~~~~~~~~p~~-~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~-~~~~~ 392 (656)
T 1k3i_A 315 NGEVYSPSSKTWTSLPNAKVNPML-TADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGK-RQSNR 392 (656)
T ss_dssp CEEEEETTTTEEEEETTSCSGGGC-CCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEE-CEETT
T ss_pred cceEeCCCCCcceeCCCccccccc-cccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCc-ccccc
Confidence 789999999999986321 1111 0011122234555555442 34688999999888642111 110
Q ss_pred ---cccccceeEEE-EeCCeEEEEEEecC-C-----cCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCC
Q 046579 272 ---EWEERRHQYFG-ESRGHLHLIEIYGP-C-----TALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDL 341 (416)
Q Consensus 272 ---~~~~~~~~~l~-~~~G~L~~v~~~~~-~-----~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~ 341 (416)
.........+. ..+|+|+++..... . ...-.|+..+-....|.+.. .+.+ |.-.
T Consensus 393 ~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~---~~~m----p~~R--------- 456 (656)
T 1k3i_A 393 GVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA---SNGL----YFAR--------- 456 (656)
T ss_dssp EECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC---TTCC----SSCC---------
T ss_pred ccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc---cCCC----CCCc---------
Confidence 00000111111 24899998865321 0 11224666555556797654 0111 1100
Q ss_pred ceeeeEEEEeecCCCCCCcEEEEee------------CCeEEEEEcCCCcEEEeeecCCCC
Q 046579 342 HYYGYSILCVVREENDDDSYLVLHL------------PKKAVRYNLKDRTFKKLHDVAPAG 390 (416)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~i~l~~------------~~~l~~ydl~~~~~~~v~~~~~~~ 390 (416)
...-..+.. ++.++++.. ...+..||+++++|+.+..+..+|
T Consensus 457 ---~~~~~~~l~----~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R 510 (656)
T 1k3i_A 457 ---TFHTSVVLP----DGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVR 510 (656)
T ss_dssp ---BSCEEEECT----TSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCC
T ss_pred ---ccCCeEECC----CCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCcc
Confidence 011112221 344554432 147899999999999988765544
No 22
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.82 E-value=0.00026 Score=73.28 Aligned_cols=165 Identities=9% Similarity=0.045 Sum_probs=100.2
Q ss_pred CceEEeeecCCCC--CCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEE
Q 046579 131 NGLLLCSSSRAYQ--PRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIE 208 (416)
Q Consensus 131 ~GLvl~~~~~~~~--~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~ 208 (416)
+|.|++..+.... ....++++||.|++|..+++++.++.. ......+ .-+|+.+.+.... . .++
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~----h~~~~~~------~~~iyv~GG~~~~---~-~v~ 516 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR----HSACSLP------DGNVLILGGVTEG---P-AML 516 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS----CEEEECT------TSCEEEECCBCSS---C-SEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc----ceEEEEc------CCEEEEECCCCCC---C-CEE
Confidence 7776666654321 134589999999999999887764322 2221111 1234545443322 1 799
Q ss_pred EEECCCCCeeeccCCCccccccccCCcEEEc---cEEEEEeeC--------CcEEEEEcCCce------EeecCC-CCCC
Q 046579 209 IYSSKTGPWRLSGGSFTAPSVINFRGGVFWN---GAIHWVSTH--------GSSLYFDVDQEK------LREMPM-PPIP 270 (416)
Q Consensus 209 vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~---G~lyw~~~~--------~~il~fD~~~e~------~~~i~~-P~~~ 270 (416)
+|+..++.|+.....-..+.......++.++ |.+|.+... ..+.+||+.+++ |..+.- |+.+
T Consensus 517 ~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~ 596 (695)
T 2zwa_A 517 LYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQ 596 (695)
T ss_dssp EEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGC
T ss_pred EEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCC
Confidence 9999999999875422222111233446667 889988753 258999999998 877632 3221
Q ss_pred CcccccceeEEEEeC-CeEEEEEEecCCc---CeEEEEEEeCCCCCce
Q 046579 271 DEWEERRHQYFGESR-GHLHLIEIYGPCT---ALFNVYEMKTDYSGWF 314 (416)
Q Consensus 271 ~~~~~~~~~~l~~~~-G~L~~v~~~~~~~---~~l~iW~l~~~~~~W~ 314 (416)
.. . ...+..+ |+|+++....... ..-.||.++-....|.
T Consensus 597 R~----~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 597 RY----G-SQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp CB----S-CEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred cc----c-ceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 11 1 1244556 9999986643221 2345788886667898
No 23
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.64 E-value=1.9e-05 Score=71.21 Aligned_cols=42 Identities=19% Similarity=0.221 Sum_probs=38.4
Q ss_pred ccccCCHHHHHHHHccCChhhhhhhhcchHhHhhhhcCcccc
Q 046579 30 ETIINNDDLLTEILLCLPIKSLLKFKAVSKHWLSLISNPIFS 71 (416)
Q Consensus 30 ~~~~LPddll~eIL~rLP~~~l~r~~~VcK~W~~li~s~~F~ 71 (416)
+...||+|++..||+.|++++|+++.+|||.|+.+..++..=
T Consensus 4 ~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LW 45 (312)
T 3l2o_B 4 TLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILW 45 (312)
T ss_dssp HHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHH
T ss_pred hhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHH
Confidence 356799999999999999999999999999999999988744
No 24
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.31 E-value=0.00013 Score=68.28 Aligned_cols=43 Identities=35% Similarity=0.464 Sum_probs=38.9
Q ss_pred cccccCCHHHHHHHHccCChhhhhhhhcchHhHhhhhcCcccc
Q 046579 29 VETIINNDDLLTEILLCLPIKSLLKFKAVSKHWLSLISNPIFS 71 (416)
Q Consensus 29 ~~~~~LPddll~eIL~rLP~~~l~r~~~VcK~W~~li~s~~F~ 71 (416)
.....||+|++.+||.+|+.+++.+++.|||+|+.++.++...
T Consensus 7 ~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~ 49 (336)
T 2ast_B 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (336)
T ss_dssp CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTS
T ss_pred CChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhh
Confidence 4456799999999999999999999999999999999887754
No 25
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.30 E-value=0.0017 Score=66.70 Aligned_cols=151 Identities=13% Similarity=0.027 Sum_probs=86.6
Q ss_pred EEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCC-----CCCceEEEEEECCCCCeeeccC
Q 046579 148 YYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSL-----RDGHYQIEIYSSKTGPWRLSGG 222 (416)
Q Consensus 148 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~-----~~~~~~~~vyss~t~~W~~~~~ 222 (416)
+..+||.+++|..+++++.. ....++. +. .=+|+.+...... ......+.+|+..+++|+....
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~------~~~~av~--~~---~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~ 236 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIV------PAAAAIE--PT---SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTV 236 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSC------CSEEEEE--TT---TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEE
T ss_pred cccCCCCCCeeeeeccCCCC------ceeEEEE--ec---CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcc
Confidence 34568999999988776641 1122222 21 2356666543321 1123478999999999997632
Q ss_pred CCccccccccCCc-E-EEccEEEEEeeC--CcEEEEEcCCceEeecCCCCCCCcccccceeEEEEe-CCeEEEEEEe-cC
Q 046579 223 SFTAPSVINFRGG-V-FWNGAIHWVSTH--GSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGES-RGHLHLIEIY-GP 296 (416)
Q Consensus 223 ~~~~~~~~~~~~~-v-~~~G~lyw~~~~--~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~G~L~~v~~~-~~ 296 (416)
. +.. ....+.+ + ..+|.+|-+... ..+..||+.+++|..+. +.+... .....+.. +|+|+++... .+
T Consensus 237 ~-~~~-~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~--~~~~~R---~~~s~~~~~dg~iyv~GG~~~~ 309 (656)
T 1k3i_A 237 T-VTK-HDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGP--DMQVAR---GYQSSATMSDGRVFTIGGSWSG 309 (656)
T ss_dssp E-ECS-CCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECC--CCSSCC---SSCEEEECTTSCEEEECCCCCS
T ss_pred c-CCC-CCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECC--CCCccc---cccceEEecCCeEEEEeCcccC
Confidence 1 111 0112222 2 358999988763 36999999999999873 222211 11235566 9999998652 21
Q ss_pred CcCeEEEEEEeCCCCCceEE
Q 046579 297 CTALFNVYEMKTDYSGWFVK 316 (416)
Q Consensus 297 ~~~~l~iW~l~~~~~~W~~~ 316 (416)
....-.+|+.+-....|...
T Consensus 310 ~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 310 GVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp SSCCCCEEEEETTTTEEEEE
T ss_pred CcccccceEeCCCCCcceeC
Confidence 11122345555445679865
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.27 E-value=0.0018 Score=65.27 Aligned_cols=34 Identities=15% Similarity=0.309 Sum_probs=29.5
Q ss_pred cccCCHHHHHHHHccCC-hhhhhhhhcchHhHhhh
Q 046579 31 TIINNDDLLTEILLCLP-IKSLLKFKAVSKHWLSL 64 (416)
Q Consensus 31 ~~~LPddll~eIL~rLP-~~~l~r~~~VcK~W~~l 64 (416)
...||+|++.+||.+|| .+++.+++.|||+|+.+
T Consensus 6 ~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 6 ALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred hhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 45699999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=95.61 E-value=0.0047 Score=62.28 Aligned_cols=34 Identities=15% Similarity=0.355 Sum_probs=31.6
Q ss_pred ccCCHHHHHHHHccC-ChhhhhhhhcchHhHhhhh
Q 046579 32 IINNDDLLTEILLCL-PIKSLLKFKAVSKHWLSLI 65 (416)
Q Consensus 32 ~~LPddll~eIL~rL-P~~~l~r~~~VcK~W~~li 65 (416)
..||||++.+||.+| |.+++.+++.|||+|+.+.
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 359999999999999 8999999999999999884
No 28
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=91.01 E-value=8.8 Score=34.78 Aligned_cols=197 Identities=11% Similarity=-0.014 Sum_probs=103.0
Q ss_pred eCceEEeeecCCCCCCceEEEEccCCcceE-ecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEE
Q 046579 130 CNGLLLCSSSRAYQPRRNYYVYNPTNKQYT-ILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIE 208 (416)
Q Consensus 130 ~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~ 208 (416)
.++.+.+... ....+.|+|+.|++.. .++.... ... +.+++. . +++...... -.+.
T Consensus 52 ~~~~lyv~~~----~~~~v~viD~~t~~~~~~i~~~~~-------p~~--i~~~~~---g-~lyv~~~~~------~~v~ 108 (328)
T 3dsm_A 52 RDGIGWIVVN----NSHVIFAIDINTFKEVGRITGFTS-------PRY--IHFLSD---E-KAYVTQIWD------YRIF 108 (328)
T ss_dssp ETTEEEEEEG----GGTEEEEEETTTCCEEEEEECCSS-------EEE--EEEEET---T-EEEEEEBSC------SEEE
T ss_pred ECCEEEEEEc----CCCEEEEEECcccEEEEEcCCCCC-------CcE--EEEeCC---C-eEEEEECCC------CeEE
Confidence 4666666653 2467999999999874 4653321 122 334332 3 454443221 1788
Q ss_pred EEECCCCCeee-ccCCCccccccccCCcEEEccEEEEEee--CCcEEEEEcCCceEe-ecCCCCCCCcccccceeEEEEe
Q 046579 209 IYSSKTGPWRL-SGGSFTAPSVINFRGGVFWNGAIHWVST--HGSSLYFDVDQEKLR-EMPMPPIPDEWEERRHQYFGES 284 (416)
Q Consensus 209 vyss~t~~W~~-~~~~~~~~~~~~~~~~v~~~G~lyw~~~--~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~l~~~ 284 (416)
+++..+++-.. +...............+..+|.+|-... .+.|.++|+.+.+.. .++....|... ....
T Consensus 109 ~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i-------~~~~ 181 (328)
T 3dsm_A 109 IINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSL-------VMDK 181 (328)
T ss_dssp EEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCC-------EECT
T ss_pred EEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccce-------EEcC
Confidence 99988876432 2211100000011222335678877664 467999999987653 45543332211 1233
Q ss_pred CCeEEEEEEecCCcC-----eEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCC
Q 046579 285 RGHLHLIEIYGPCTA-----LFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDD 359 (416)
Q Consensus 285 ~G~L~~v~~~~~~~~-----~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (416)
+|+|+++........ .-.|++++....+ ...++.++.- ....-+++.. ++
T Consensus 182 dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~--v~~~~~~~~g-------------------~~p~~la~~~----d~ 236 (328)
T 3dsm_A 182 YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT--VEKQFKFKLG-------------------DWPSEVQLNG----TR 236 (328)
T ss_dssp TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE--EEEEEECCTT-------------------CCCEEEEECT----TS
T ss_pred CCCEEEEECCCccCCccccCCceEEEEECCCCe--EEEEEecCCC-------------------CCceeEEEec----CC
Confidence 788877653211000 1345666643332 3334433210 0112355543 46
Q ss_pred cEEEEeeCCeEEEEEcCCCcEEE
Q 046579 360 SYLVLHLPKKAVRYNLKDRTFKK 382 (416)
Q Consensus 360 ~~i~l~~~~~l~~ydl~~~~~~~ 382 (416)
..+|+... .++.+|++++++..
T Consensus 237 ~~lyv~~~-~v~~~d~~t~~~~~ 258 (328)
T 3dsm_A 237 DTLYWINN-DIWRMPVEADRVPV 258 (328)
T ss_dssp CEEEEESS-SEEEEETTCSSCCS
T ss_pred CEEEEEcc-EEEEEECCCCceee
Confidence 77887655 99999999988743
No 29
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=90.10 E-value=9.8 Score=33.86 Aligned_cols=151 Identities=12% Similarity=0.037 Sum_probs=76.7
Q ss_pred EEEEEECCC-CCeeecc--C-CCccccccccCCcEEE--ccE-EEEEe-eCCcEEEEEcCC--ceEe---ecC-CCCCCC
Q 046579 206 QIEIYSSKT-GPWRLSG--G-SFTAPSVINFRGGVFW--NGA-IHWVS-THGSSLYFDVDQ--EKLR---EMP-MPPIPD 271 (416)
Q Consensus 206 ~~~vyss~t-~~W~~~~--~-~~~~~~~~~~~~~v~~--~G~-lyw~~-~~~~il~fD~~~--e~~~---~i~-~P~~~~ 271 (416)
.+.+|+..+ +...... . ..... .....+.+ +|. +|... ..+.|..+|+.. .++. .+. +|....
T Consensus 152 ~v~~~d~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (343)
T 1ri6_A 152 RICLFTVSDDGHLVAQDPAEVTTVEG---AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFS 228 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECSTT---CCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCC
T ss_pred EEEEEEecCCCceeeecccccccCCC---CCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcccc
Confidence 688888877 6665321 0 00000 00111222 454 55554 345788899843 3332 222 222100
Q ss_pred cccccceeEEEEe-CCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEE
Q 046579 272 EWEERRHQYFGES-RGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILC 350 (416)
Q Consensus 272 ~~~~~~~~~l~~~-~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~ 350 (416)
.. .....+.-. +|+..++.... ...+.+|.++...+.+.....+.... ...-++
T Consensus 229 ~~--~~~~~i~~s~dg~~l~v~~~~--~~~i~v~d~~~~~~~~~~~~~~~~~~---------------------~~~~~~ 283 (343)
T 1ri6_A 229 DT--RWAADIHITPDGRHLYACDRT--ASLITVFSVSEDGSVLSKEGFQPTET---------------------QPRGFN 283 (343)
T ss_dssp SC--CCEEEEEECTTSSEEEEEETT--TTEEEEEEECTTSCCEEEEEEEECSS---------------------SCCCEE
T ss_pred cc--CCccceEECCCCCEEEEEecC--CCEEEEEEEcCCCCceEEeeeecCCC---------------------ccceEE
Confidence 00 011123333 56544443322 36899999986555666666554321 011244
Q ss_pred eecCCCCCCcEEEEee--CCeEEEE--EcCCCcEEEeeecCC
Q 046579 351 VVREENDDDSYLVLHL--PKKAVRY--NLKDRTFKKLHDVAP 388 (416)
Q Consensus 351 ~~~~~~~~~~~i~l~~--~~~l~~y--dl~~~~~~~v~~~~~ 388 (416)
+.. ++..+++.. ++.+.+| |.++++++.+..+..
T Consensus 284 ~s~----dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~ 321 (343)
T 1ri6_A 284 VDH----SGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV 321 (343)
T ss_dssp ECT----TSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC
T ss_pred ECC----CCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc
Confidence 433 466677754 5677777 777888888877654
No 30
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=87.75 E-value=16 Score=33.39 Aligned_cols=110 Identities=11% Similarity=0.061 Sum_probs=59.9
Q ss_pred EEeeeCceEEeeecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCce
Q 046579 126 VLQSCNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHY 205 (416)
Q Consensus 126 ~~~s~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~ 205 (416)
..+..+|.|.+... ...++.+|+.|++.+.--...... .. ... .. +. +|+..... -
T Consensus 98 ~~~~~~~~v~v~~~-----~g~l~a~d~~tG~~~W~~~~~~~~--~~-~p~---~~-----~~-~v~v~~~~-------g 153 (376)
T 3q7m_A 98 GVTVSGGHVYIGSE-----KAQVYALNTSDGTVAWQTKVAGEA--LS-RPV---VS-----DG-LVLIHTSN-------G 153 (376)
T ss_dssp EEEEETTEEEEEET-----TSEEEEEETTTCCEEEEEECSSCC--CS-CCE---EE-----TT-EEEEECTT-------S
T ss_pred CceEeCCEEEEEcC-----CCEEEEEECCCCCEEEEEeCCCce--Ec-CCE---EE-----CC-EEEEEcCC-------C
Confidence 34456888887763 467999999999865321111100 00 011 11 11 23322111 1
Q ss_pred EEEEEECCCCC--eeeccCCCccccccccCCcEEEccEEEEEeeCCcEEEEEcCCce
Q 046579 206 QIEIYSSKTGP--WRLSGGSFTAPSVINFRGGVFWNGAIHWVSTHGSSLYFDVDQEK 260 (416)
Q Consensus 206 ~~~vyss~t~~--W~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~il~fD~~~e~ 260 (416)
.+..|+..+++ |+......... .......+..+|.+|.-...+.+.++|..+.+
T Consensus 154 ~l~~~d~~tG~~~W~~~~~~~~~~-~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~ 209 (376)
T 3q7m_A 154 QLQALNEADGAVKWTVNLDMPSLS-LRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQ 209 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC------CCCCCCEEETTEEEECCTTTEEEEEETTTCC
T ss_pred eEEEEECCCCcEEEEEeCCCCcee-ecCCCCcEEECCEEEEEcCCCEEEEEECCCCc
Confidence 67888887775 88653211110 11234566678888887667789999987643
No 31
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=87.57 E-value=16 Score=33.02 Aligned_cols=139 Identities=11% Similarity=-0.053 Sum_probs=70.2
Q ss_pred CceEEeeecCCCCCCceEEEEccCCcceEe-cCCC--CcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEE
Q 046579 131 NGLLLCSSSRAYQPRRNYYVYNPTNKQYTI-LPRL--HVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQI 207 (416)
Q Consensus 131 ~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~-LP~~--~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~ 207 (416)
+|+.++..+.-......+.++||.|++... ++.. ....+ ...-++.++. .. ++...... -.+
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg----~~~~~i~~~~----~~-lyv~~~~~------~~v 66 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLG----DVAQSMVIRD----GI-GWIVVNNS------HVI 66 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCB----SCEEEEEEET----TE-EEEEEGGG------TEE
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccC----ccceEEEEEC----CE-EEEEEcCC------CEE
Confidence 455444443222235679999999998764 2110 00001 0112233332 22 32222221 178
Q ss_pred EEEECCCCCeee-ccCCCccccccccCCcEE-EccEEEEEe-eCCcEEEEEcCCceEe-ecCCCCCCCcccccceeEEEE
Q 046579 208 EIYSSKTGPWRL-SGGSFTAPSVINFRGGVF-WNGAIHWVS-THGSSLYFDVDQEKLR-EMPMPPIPDEWEERRHQYFGE 283 (416)
Q Consensus 208 ~vyss~t~~W~~-~~~~~~~~~~~~~~~~v~-~~G~lyw~~-~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~l~~ 283 (416)
.+++..+++-.. +... . .....++ -+|.+|... ..+.|..+|+.+.+.. .++.+.......... .+..
T Consensus 67 ~viD~~t~~~~~~i~~~-~-----~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~--~i~~ 138 (328)
T 3dsm_A 67 FAIDINTFKEVGRITGF-T-----SPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTE--QMVQ 138 (328)
T ss_dssp EEEETTTCCEEEEEECC-S-----SEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCC--CEEE
T ss_pred EEEECcccEEEEEcCCC-C-----CCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcc--eEEE
Confidence 999998876532 2110 0 1112222 578888877 5678999999987764 465544110000011 1333
Q ss_pred eCCeEEEEE
Q 046579 284 SRGHLHLIE 292 (416)
Q Consensus 284 ~~G~L~~v~ 292 (416)
.+|+|++..
T Consensus 139 ~~~~lyv~~ 147 (328)
T 3dsm_A 139 YGKYVYVNC 147 (328)
T ss_dssp ETTEEEEEE
T ss_pred ECCEEEEEc
Confidence 688888764
No 32
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=87.21 E-value=24 Score=36.19 Aligned_cols=70 Identities=7% Similarity=0.044 Sum_probs=40.3
Q ss_pred CeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE-
Q 046579 286 GHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL- 364 (416)
Q Consensus 286 G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l- 364 (416)
|.+.++...+ ..+.||.+......+....++.... ..+.-+++.+.. ..+.+++.
T Consensus 170 ~~~l~sgs~d---g~I~iwd~~~~~~~~~~~~~~~~h~--------------------~~V~~l~~sp~~-~~~~~l~s~ 225 (753)
T 3jro_A 170 SRKFVTGGAD---NLVKIWKYNSDAQTYVLESTLEGHS--------------------DWVRDVAWSPTV-LLRSYLASV 225 (753)
T ss_dssp GCCEEEEETT---SCEEEEEEETTTTEEEEEEEECCCS--------------------SCEEEEEECCCC-SSSEEEEEE
T ss_pred CCEEEEEECC---CeEEEEeccCCcccceeeeeecCCC--------------------CcEEEEEeccCC-CCCCEEEEE
Confidence 5555554433 5799999987655566655543110 223445554310 00445544
Q ss_pred eeCCeEEEEEcCCCc
Q 046579 365 HLPKKAVRYNLKDRT 379 (416)
Q Consensus 365 ~~~~~l~~ydl~~~~ 379 (416)
..++.+..||+++++
T Consensus 226 s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 226 SQDRTCIIWTQDNEQ 240 (753)
T ss_dssp ESSSCEEEEEESSSS
T ss_pred ecCCEEEEecCCCCC
Confidence 457889999998864
No 33
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=85.50 E-value=20 Score=32.21 Aligned_cols=71 Identities=7% Similarity=0.045 Sum_probs=41.3
Q ss_pred CCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE
Q 046579 285 RGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL 364 (416)
Q Consensus 285 ~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l 364 (416)
+|.+.++...+ ..+.||.+......|.....+.... ..+.-+++.+.+ ..+.+|+.
T Consensus 171 ~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~h~--------------------~~v~~~~~sp~~-~~~~~l~s 226 (379)
T 3jrp_A 171 ESRKFVTGGAD---NLVKIWKYNSDAQTYVLESTLEGHS--------------------DWVRDVAWSPTV-LLRSYLAS 226 (379)
T ss_dssp TTCEEEEEETT---SCEEEEEEETTTTEEEEEEEECCCS--------------------SCEEEEEECCCC-SSSEEEEE
T ss_pred CCCEEEEEeCC---CeEEEEEecCCCcceeeEEEEeccc--------------------CcEeEEEECCCC-CCCCeEEE
Confidence 46666665443 5799999987655676666553210 223344554310 00444444
Q ss_pred -eeCCeEEEEEcCCCc
Q 046579 365 -HLPKKAVRYNLKDRT 379 (416)
Q Consensus 365 -~~~~~l~~ydl~~~~ 379 (416)
..++.+..||+++++
T Consensus 227 ~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 227 VSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp EETTSCEEEEEESSTT
T ss_pred EeCCCEEEEEeCCCCC
Confidence 457789999998874
No 34
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=83.42 E-value=23 Score=31.17 Aligned_cols=27 Identities=19% Similarity=0.137 Sum_probs=19.4
Q ss_pred CCcEEEEee-CCeEEEEEcCCCcEEEee
Q 046579 358 DDSYLVLHL-PKKAVRYNLKDRTFKKLH 384 (416)
Q Consensus 358 ~~~~i~l~~-~~~l~~ydl~~~~~~~v~ 384 (416)
++.+++... +++++.+|++|+++.+-.
T Consensus 175 ~g~~~v~~~~~~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 175 NGDCLVACGDAHCFVQLNLESNRIVRRV 202 (276)
T ss_dssp TSCEEEECBTTSEEEEECTTTCCEEEEE
T ss_pred CCCEEEEeCCCCeEEEEeCcCCcEEEEe
Confidence 455666544 558999999988876654
No 35
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=83.35 E-value=29 Score=32.28 Aligned_cols=198 Identities=11% Similarity=0.093 Sum_probs=94.0
Q ss_pred eCceEEeeecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEE
Q 046579 130 CNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEI 209 (416)
Q Consensus 130 ~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~v 209 (416)
.+++|.+.. +..++|||..|++...+-...... .....+.+.|. +.|-++ ...+. .+.+
T Consensus 115 ~~n~lAvgl------d~tV~lWd~~tg~~~~~~~~~~~~-----~~V~sv~fspd--g~~las--gs~Dg------~v~i 173 (420)
T 4gga_A 115 SGNVLAVAL------DNSVYLWSASSGDILQLLQMEQPG-----EYISSVAWIKE--GNYLAV--GTSSA------EVQL 173 (420)
T ss_dssp TTSEEEEEE------TTEEEEEETTTCCEEEEEECCSTT-----CCEEEEEECTT--SSEEEE--EETTS------CEEE
T ss_pred CCCEEEEEe------CCEEEEEECCCCCEEEEEEecCCC-----CcEEEEEECCC--CCEEEE--EECCC------eEEE
Confidence 455555443 467999999999987654332211 11233556553 455332 22221 6889
Q ss_pred EECCCCCeeeccCCCccccccccCCcEEEccEEEEE-eeCCcEEEEEcCCceEeecCCCCCCCcccccceeEEEE-eCCe
Q 046579 210 YSSKTGPWRLSGGSFTAPSVINFRGGVFWNGAIHWV-STHGSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGE-SRGH 287 (416)
Q Consensus 210 yss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lyw~-~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~-~~G~ 287 (416)
++..+++-...-.... .....+..+|.+-.. ..++.+..+|..........+... ......+.. .+|+
T Consensus 174 Wd~~~~~~~~~~~~h~-----~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h-----~~~~~~~~~~~~g~ 243 (420)
T 4gga_A 174 WDVQQQKRLRNMTSHS-----ARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGH-----SQEVCGLRWAPDGR 243 (420)
T ss_dssp EETTTTEEEEEECCCS-----SCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECC-----SSCEEEEEECTTSS
T ss_pred EEcCCCcEEEEEeCCC-----CceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEeccc-----ccceeeeeecCCCC
Confidence 9988764322111000 011223344433322 233466777766533322111111 011112222 2555
Q ss_pred EEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEe--
Q 046579 288 LHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLH-- 365 (416)
Q Consensus 288 L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~-- 365 (416)
+.+....+ ..+.||........+........ . ...+..+++... +..++...
T Consensus 244 ~l~s~~~D---~~v~i~~~~~~~~~~~~~~~~~~---------~-----------~~~V~~~~~~p~---~~~~la~~~g 297 (420)
T 4gga_A 244 HLASGGND---NLVNVWPSAPGEGGWVPLQTFTQ---------H-----------QGAVKAVAWCPW---QSNVLATGGG 297 (420)
T ss_dssp EEEEEETT---SCEEEEESSCCSSCSCCSEEECC---------C-----------SSCEEEEEECTT---CTTEEEEEEC
T ss_pred eeeeeecc---ccceEEeeccccccceeeeeecc---------c-----------CCceeeeeeCCC---cccEEEEEee
Confidence 55544333 57899988764333322222110 0 022334444432 24444442
Q ss_pred -eCCeEEEEEcCCCcEEEee
Q 046579 366 -LPKKAVRYNLKDRTFKKLH 384 (416)
Q Consensus 366 -~~~~l~~ydl~~~~~~~v~ 384 (416)
.++.+.+||+.+++.....
T Consensus 298 s~D~~I~iwd~~t~~~~~~~ 317 (420)
T 4gga_A 298 TSDRHIRIWNVCSGACLSAV 317 (420)
T ss_dssp TTTCEEEEEETTTTEEEEEE
T ss_pred cCCCEEEEEeCCccccceee
Confidence 3678888999888766544
No 36
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=82.97 E-value=14 Score=33.78 Aligned_cols=117 Identities=15% Similarity=0.139 Sum_probs=63.6
Q ss_pred CCcEEEccEEEEEeeCCcEEEEEcCCc--eEeecCCCCCCC---cccccceeEEEEeCCeEEEEEEecCCcCeEEEEEEe
Q 046579 233 RGGVFWNGAIHWVSTHGSSLYFDVDQE--KLREMPMPPIPD---EWEERRHQYFGESRGHLHLIEIYGPCTALFNVYEMK 307 (416)
Q Consensus 233 ~~~v~~~G~lyw~~~~~~il~fD~~~e--~~~~i~~P~~~~---~~~~~~~~~l~~~~G~L~~v~~~~~~~~~l~iW~l~ 307 (416)
..++..+|.+|.....+.|.+||.++. .|+. +.+.... .............+|.|++... + . .|..++
T Consensus 47 ~~p~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-~---g--~l~a~d 119 (376)
T 3q7m_A 47 LHPALADNVVYAADRAGLVKALNADDGKEIWSV-SLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE-K---A--QVYALN 119 (376)
T ss_dssp CCCEEETTEEEEECTTSEEEEEETTTCCEEEEE-ECCC---CCSCCCCCEEEEEEEETTEEEEEET-T---S--EEEEEE
T ss_pred eccEEECCEEEEEcCCCeEEEEEccCCceeeee-cCccccccccccCcccccCceEeCCEEEEEcC-C---C--EEEEEE
Confidence 467889999999887789999998754 4553 3322100 0001111234556777776532 1 2 345555
Q ss_pred CC--CCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE-eeCCeEEEEEcCCCcEEEee
Q 046579 308 TD--YSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL-HLPKKAVRYNLKDRTFKKLH 384 (416)
Q Consensus 308 ~~--~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-~~~~~l~~ydl~~~~~~~v~ 384 (416)
.. ...|... +.. .+. ..++ + .++.|++ ..++.++++|.++++..+..
T Consensus 120 ~~tG~~~W~~~----~~~------~~~-------------~~p~-~------~~~~v~v~~~~g~l~~~d~~tG~~~W~~ 169 (376)
T 3q7m_A 120 TSDGTVAWQTK----VAG------EAL-------------SRPV-V------SDGLVLIHTSNGQLQALNEADGAVKWTV 169 (376)
T ss_dssp TTTCCEEEEEE----CSS------CCC-------------SCCE-E------ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCCCCEEEEEe----CCC------ceE-------------cCCE-E------ECCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 33 3346432 111 000 0111 1 1335566 45778999999999877766
Q ss_pred ec
Q 046579 385 DV 386 (416)
Q Consensus 385 ~~ 386 (416)
+.
T Consensus 170 ~~ 171 (376)
T 3q7m_A 170 NL 171 (376)
T ss_dssp EC
T ss_pred eC
Confidence 54
No 37
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=82.78 E-value=25 Score=31.12 Aligned_cols=177 Identities=11% Similarity=0.018 Sum_probs=91.2
Q ss_pred CceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCCe-ee-ccC
Q 046579 145 RRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGPW-RL-SGG 222 (416)
Q Consensus 145 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W-~~-~~~ 222 (416)
...+.++|+.|++....-..+. ... ++.++|. +.+ ++...... -.+.+++..++.- .. ...
T Consensus 19 ~~~v~~~d~~~~~~~~~~~~~~-------~~~-~~~~s~d--g~~-l~~~~~~~------~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 19 LRRISFFSTDTLEILNQITLGY-------DFV-DTAITSD--CSN-VVVTSDFC------QTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp GTEEEEEETTTCCEEEEEECCC-------CEE-EEEECSS--SCE-EEEEESTT------CEEEEEECSSSSCEEEEEEE
T ss_pred CCeEEEEeCcccceeeeEEccC-------Ccc-eEEEcCC--CCE-EEEEeCCC------CeEEEEECCCCceeEEeccc
Confidence 5679999999998865422221 112 5667764 343 33332221 1788999988764 21 111
Q ss_pred CCccccccccCCcEE--Ecc-EEEEEeeCC----cEEEEEcCCceEe-ecCCCCCCCcccccceeEEEEe-CCe-EEEEE
Q 046579 223 SFTAPSVINFRGGVF--WNG-AIHWVSTHG----SSLYFDVDQEKLR-EMPMPPIPDEWEERRHQYFGES-RGH-LHLIE 292 (416)
Q Consensus 223 ~~~~~~~~~~~~~v~--~~G-~lyw~~~~~----~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~l~~~-~G~-L~~v~ 292 (416)
.. ....++. -+| .+| ..... .|..+|+.+.+.. .++....+ ..+... +|+ |++..
T Consensus 82 ~~------~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~--------~~~~~spdg~~l~~~~ 146 (331)
T 3u4y_A 82 GQ------SSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPIPYDA--------VGIAISPNGNGLILID 146 (331)
T ss_dssp CS------SCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEECCTTE--------EEEEECTTSSCEEEEE
T ss_pred CC------CCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEEECCCCc--------cceEECCCCCEEEEEe
Confidence 10 1111122 245 355 54444 7999999876653 33332211 123333 666 55443
Q ss_pred EecCCcCe-EEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEe--eCCe
Q 046579 293 IYGPCTAL-FNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLH--LPKK 369 (416)
Q Consensus 293 ~~~~~~~~-l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~--~~~~ 369 (416)
... .. +.+|.++.+.......... + +.- ....-+++.. ++..+++. .++.
T Consensus 147 ~~~---~~~i~~~~~~~~g~~~~~~~~~----~----~~~------------~~~~~~~~sp----dg~~l~v~~~~~~~ 199 (331)
T 3u4y_A 147 RSS---ANTVRRFKIDADGVLFDTGQEF----I----SGG------------TRPFNITFTP----DGNFAFVANLIGNS 199 (331)
T ss_dssp ETT---TTEEEEEEECTTCCEEEEEEEE----E----CSS------------SSEEEEEECT----TSSEEEEEETTTTE
T ss_pred cCC---CceEEEEEECCCCcEeecCCcc----c----cCC------------CCccceEECC----CCCEEEEEeCCCCe
Confidence 322 35 9999998543211111110 0 000 1123344543 46666664 3678
Q ss_pred EEEEEcCCCcE
Q 046579 370 AVRYNLKDRTF 380 (416)
Q Consensus 370 l~~ydl~~~~~ 380 (416)
+..||+++++.
T Consensus 200 v~v~d~~~~~~ 210 (331)
T 3u4y_A 200 IGILETQNPEN 210 (331)
T ss_dssp EEEEECSSTTS
T ss_pred EEEEECCCCcc
Confidence 99999998885
No 38
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=79.58 E-value=29 Score=30.18 Aligned_cols=110 Identities=13% Similarity=0.060 Sum_probs=64.2
Q ss_pred EEccEEEEEeeCC---cEEEEEcCCceE-eecCCCCCCCcccccceeEEEEeCCeEEEEEEecCCcCeEEEEEEeCCCCC
Q 046579 237 FWNGAIHWVSTHG---SSLYFDVDQEKL-REMPMPPIPDEWEERRHQYFGESRGHLHLIEIYGPCTALFNVYEMKTDYSG 312 (416)
Q Consensus 237 ~~~G~lyw~~~~~---~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~l~~~~G~L~~v~~~~~~~~~l~iW~l~~~~~~ 312 (416)
+.+|.||--.... .|..+|+++.+- ..+++|..+-. .-+...+++|+.+.-.+ . .+|+.+-. .
T Consensus 28 ~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fg------eGi~~~~~~ly~ltw~~---~--~v~v~D~~--t 94 (243)
T 3mbr_X 28 YLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFG------AGIVAWRDRLIQLTWRN---H--EGFVYDLA--T 94 (243)
T ss_dssp EETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCE------EEEEEETTEEEEEESSS---S--EEEEEETT--T
T ss_pred EECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcce------eEEEEeCCEEEEEEeeC---C--EEEEEECC--c
Confidence 4456777765543 689999988655 55777753221 12455688888874322 2 45666642 3
Q ss_pred ceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEe-eCCeEEEEEcCCCcEEEeeec
Q 046579 313 WFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLH-LPKKAVRYNLKDRTFKKLHDV 386 (416)
Q Consensus 313 W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~-~~~~l~~ydl~~~~~~~v~~~ 386 (416)
-.++.+|..+. ..+++.. ++..+|+. ..+.+..+|++|.+...--.+
T Consensus 95 l~~~~ti~~~~-----------------------~Gwglt~----dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 95 LTPRARFRYPG-----------------------EGWALTS----DDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp TEEEEEEECSS-----------------------CCCEEEE----CSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred CcEEEEEeCCC-----------------------CceEEee----CCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 45666665421 1123333 34456664 467999999998775543334
No 39
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=76.51 E-value=47 Score=30.60 Aligned_cols=189 Identities=15% Similarity=0.187 Sum_probs=94.6
Q ss_pred eeCceEEeeecCCCCCCceEEEEccCCcceEe-cCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEE
Q 046579 129 SCNGLLLCSSSRAYQPRRNYYVYNPTNKQYTI-LPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQI 207 (416)
Q Consensus 129 s~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~ 207 (416)
+.+|.+++... ....+.+||+-+++... ++.... ....+.+++. +.+- +...... -.+
T Consensus 178 ~~~~~~~~s~~----~d~~v~~~d~~~~~~~~~~~~~~~--------~~~~~~~~~~--~~~l-~~~~~~~------~~i 236 (433)
T 3bws_A 178 PEHNELWVSQM----QANAVHVFDLKTLAYKATVDLTGK--------WSKILLYDPI--RDLV-YCSNWIS------EDI 236 (433)
T ss_dssp GGGTEEEEEEG----GGTEEEEEETTTCCEEEEEECSSS--------SEEEEEEETT--TTEE-EEEETTT------TEE
T ss_pred cCCCEEEEEEC----CCCEEEEEECCCceEEEEEcCCCC--------CeeEEEEcCC--CCEE-EEEecCC------CcE
Confidence 45666666653 25679999998876543 332111 1223455553 3333 2222221 178
Q ss_pred EEEECCCCCeeeccCCCccccccccCCcEEE--ccEEEEEee---------CCcEEEEEcCCceEeec-CCCCCCCcccc
Q 046579 208 EIYSSKTGPWRLSGGSFTAPSVINFRGGVFW--NGAIHWVST---------HGSSLYFDVDQEKLREM-PMPPIPDEWEE 275 (416)
Q Consensus 208 ~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~---------~~~il~fD~~~e~~~~i-~~P~~~~~~~~ 275 (416)
.+|+..+++....-.... ....+.+ +|...+.+. ++.|..+|+.+.+.... ..+.
T Consensus 237 ~~~d~~~~~~~~~~~~~~------~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~------- 303 (433)
T 3bws_A 237 SVIDRKTKLEIRKTDKIG------LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG------- 303 (433)
T ss_dssp EEEETTTTEEEEECCCCS------EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE-------
T ss_pred EEEECCCCcEEEEecCCC------CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC-------
Confidence 899988776533211000 0111222 453333332 34688999987654332 1111
Q ss_pred cceeEEEE-eCCe-EEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeec
Q 046579 276 RRHQYFGE-SRGH-LHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVR 353 (416)
Q Consensus 276 ~~~~~l~~-~~G~-L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 353 (416)
....+.- .+|+ |++... . ...+.+|.++. ......+... ....-+++..
T Consensus 304 -~~~~~~~~~~g~~l~~~~~-~--~~~v~v~d~~~----~~~~~~~~~~---------------------~~~~~~~~s~ 354 (433)
T 3bws_A 304 -NKRHIVSGNTENKIYVSDM-C--CSKIEVYDLKE----KKVQKSIPVF---------------------DKPNTIALSP 354 (433)
T ss_dssp -CEEEEEECSSTTEEEEEET-T--TTEEEEEETTT----TEEEEEEECS---------------------SSEEEEEECT
T ss_pred -CcceEEECCCCCEEEEEec-C--CCEEEEEECCC----CcEEEEecCC---------------------CCCCeEEEcC
Confidence 1111222 2554 444422 2 25788898763 2334443211 1123445543
Q ss_pred CCCCCCcEEEEee----------------CCeEEEEEcCCCcEEEee
Q 046579 354 EENDDDSYLVLHL----------------PKKAVRYNLKDRTFKKLH 384 (416)
Q Consensus 354 ~~~~~~~~i~l~~----------------~~~l~~ydl~~~~~~~v~ 384 (416)
++..+++.. ++.+..||+++++.....
T Consensus 355 ----dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~ 397 (433)
T 3bws_A 355 ----DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFW 397 (433)
T ss_dssp ----TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEE
T ss_pred ----CCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEe
Confidence 455666643 248999999998866554
No 40
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=76.35 E-value=51 Score=30.86 Aligned_cols=126 Identities=13% Similarity=0.078 Sum_probs=71.0
Q ss_pred ccEEEEEeeCCcEEEEEcCCceEeec---CC-CC-C-CCcccccceeEEEEe--CCeEEEEEEecCC----cCeEEEEEE
Q 046579 239 NGAIHWVSTHGSSLYFDVDQEKLREM---PM-PP-I-PDEWEERRHQYFGES--RGHLHLIEIYGPC----TALFNVYEM 306 (416)
Q Consensus 239 ~G~lyw~~~~~~il~fD~~~e~~~~i---~~-P~-~-~~~~~~~~~~~l~~~--~G~L~~v~~~~~~----~~~l~iW~l 306 (416)
+|.++|.+..+.+.++|+.++.-..+ .+ .. . ...+.......++.. +++||++...+.. ...=+||++
T Consensus 237 dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~vi 316 (386)
T 3sjl_D 237 AGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVL 316 (386)
T ss_dssp TTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred CCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEE
Confidence 88999999989999999987653322 10 00 0 001110011113333 5667766542211 124679999
Q ss_pred eCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCc-EEEEe--eCCeEEEEEcCCCcEEEe
Q 046579 307 KTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDS-YLVLH--LPKKAVRYNLKDRTFKKL 383 (416)
Q Consensus 307 ~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~l~--~~~~l~~ydl~~~~~~~v 383 (416)
+-. .+..+.+|.++. ...-+++.. ++. .+|.. .++.+.+||..+++..+-
T Consensus 317 D~~--t~kv~~~i~vg~---------------------~~~~lavs~----D~~~~ly~tn~~~~~VsViD~~t~k~~~~ 369 (386)
T 3sjl_D 317 DAK--TGERLAKFEMGH---------------------EIDSINVSQ----DEKPLLYALSTGDKTLYIHDAESGEELRS 369 (386)
T ss_dssp ETT--TCCEEEEEEEEE---------------------EECEEEECS----SSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred ECC--CCeEEEEEECCC---------------------CcceEEECC----CCCeEEEEEcCCCCeEEEEECCCCcEEEE
Confidence 963 566777776542 111345544 343 66663 367999999999886655
Q ss_pred eecCCCCC
Q 046579 384 HDVAPAGN 391 (416)
Q Consensus 384 ~~~~~~~~ 391 (416)
-...+..|
T Consensus 370 i~~~~~p~ 377 (386)
T 3sjl_D 370 VNQLGHGP 377 (386)
T ss_dssp ECCCCSSC
T ss_pred ecCCCCCc
Confidence 44544433
No 41
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=75.35 E-value=51 Score=30.38 Aligned_cols=197 Identities=10% Similarity=-0.043 Sum_probs=95.3
Q ss_pred CceEEeeecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEE
Q 046579 131 NGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIY 210 (416)
Q Consensus 131 ~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vy 210 (416)
+|.+++... ....+.+||+.+++.....+.....+.. .....+.+.+. + . ++...... -.+.+|
T Consensus 133 ~~~~~~~~~----~~~~i~~~d~~~g~~~~~~~~~~~~~~~--~~v~~~~~~~~--~-~-~~~s~~~d------~~v~~~ 196 (433)
T 3bws_A 133 NTRLAIPLL----EDEGMDVLDINSGQTVRLSPPEKYKKKL--GFVETISIPEH--N-E-LWVSQMQA------NAVHVF 196 (433)
T ss_dssp SSEEEEEBT----TSSSEEEEETTTCCEEEECCCHHHHTTC--CEEEEEEEGGG--T-E-EEEEEGGG------TEEEEE
T ss_pred CCeEEEEeC----CCCeEEEEECCCCeEeeecCcccccccC--CceeEEEEcCC--C-E-EEEEECCC------CEEEEE
Confidence 666666653 2456999999999887654332111111 12223444432 2 2 33332222 178899
Q ss_pred ECCCCCeeec-cCCCccccccccCCcEEEcc-EEEEEe-eCCcEEEEEcCCceEee-cCCCCCCCcccccceeEEEEe-C
Q 046579 211 SSKTGPWRLS-GGSFTAPSVINFRGGVFWNG-AIHWVS-THGSSLYFDVDQEKLRE-MPMPPIPDEWEERRHQYFGES-R 285 (416)
Q Consensus 211 ss~t~~W~~~-~~~~~~~~~~~~~~~v~~~G-~lyw~~-~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~-~ 285 (416)
+.++++-... ...... ...-...-+| .+|... .++.|..+|+.+.+... ++... ....+... +
T Consensus 197 d~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~ 264 (433)
T 3bws_A 197 DLKTLAYKATVDLTGKW----SKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG--------LPRGLLLSKD 264 (433)
T ss_dssp ETTTCCEEEEEECSSSS----EEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS--------EEEEEEECTT
T ss_pred ECCCceEEEEEcCCCCC----eeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC--------CceEEEEcCC
Confidence 9887654321 110000 0001111134 354444 34678999998766533 32211 01123332 5
Q ss_pred CeEEEEEEecC-----CcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCc
Q 046579 286 GHLHLIEIYGP-----CTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDS 360 (416)
Q Consensus 286 G~L~~v~~~~~-----~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (416)
|+..++..... ....+.+|.++.. .....+... ....-+++.. ++.
T Consensus 265 g~~l~~~~~~~~~~~~~dg~i~~~d~~~~----~~~~~~~~~---------------------~~~~~~~~~~----~g~ 315 (433)
T 3bws_A 265 GKELYIAQFSASNQESGGGRLGIYSMDKE----KLIDTIGPP---------------------GNKRHIVSGN----TEN 315 (433)
T ss_dssp SSEEEEEEEESCTTCSCCEEEEEEETTTT----EEEEEEEEE---------------------ECEEEEEECS----STT
T ss_pred CCEEEEEECCCCccccCCCeEEEEECCCC----cEEeeccCC---------------------CCcceEEECC----CCC
Confidence 65444443321 1236778877642 122222111 1112344433 454
Q ss_pred EEEE--eeCCeEEEEEcCCCcEEEee
Q 046579 361 YLVL--HLPKKAVRYNLKDRTFKKLH 384 (416)
Q Consensus 361 ~i~l--~~~~~l~~ydl~~~~~~~v~ 384 (416)
.+++ ..++.+..||+++++.....
T Consensus 316 ~l~~~~~~~~~v~v~d~~~~~~~~~~ 341 (433)
T 3bws_A 316 KIYVSDMCCSKIEVYDLKEKKVQKSI 341 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEEEecCCCEEEEEECCCCcEEEEe
Confidence 5555 35789999999988765543
No 42
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=71.88 E-value=64 Score=30.02 Aligned_cols=185 Identities=10% Similarity=0.055 Sum_probs=84.5
Q ss_pred CceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCCeeeccCCC
Q 046579 145 RRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGPWRLSGGSF 224 (416)
Q Consensus 145 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~ 224 (416)
++.+.|||..+++...+-.... +. .....+.|.|. .+. .++....+. .+.+++.+++.-+......
T Consensus 141 dg~i~lWd~~~~~~~~~~~~~g---H~--~~V~~l~f~p~-~~~-~l~s~s~D~-------~v~iwd~~~~~~~~~~~~~ 206 (435)
T 4e54_B 141 GGDIMLWNFGIKDKPTFIKGIG---AG--GSITGLKFNPL-NTN-QFYASSMEG-------TTRLQDFKGNILRVFASSD 206 (435)
T ss_dssp TSCEEEECSSCCSCCEEECCCS---SS--CCCCEEEECSS-CTT-EEEEECSSS-------CEEEEETTSCEEEEEECCS
T ss_pred CCEEEEEECCCCCceeEEEccC---CC--CCEEEEEEeCC-CCC-EEEEEeCCC-------EEEEeeccCCceeEEeccC
Confidence 4568899998877543322211 11 12234556664 223 333322222 6788888776554432111
Q ss_pred ccccccccCCcEE--EccEEEEEe-eCCcEEEEEcCCceEeecCCCCCCCcccccceeEEEEe-CCe-EEEEEEecCCcC
Q 046579 225 TAPSVINFRGGVF--WNGAIHWVS-THGSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGES-RGH-LHLIEIYGPCTA 299 (416)
Q Consensus 225 ~~~~~~~~~~~v~--~~G~lyw~~-~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~G~-L~~v~~~~~~~~ 299 (416)
... .....+. -+|.+.... .++.|..+|+.++....+..- ......+.-. +|. +.+....+ .
T Consensus 207 ~~~---~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h-------~~~v~~v~~~p~~~~~~~s~s~d---~ 273 (435)
T 4e54_B 207 TIN---IWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMH-------KKKVTHVALNPCCDWFLATASVD---Q 273 (435)
T ss_dssp SCS---CCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCC-------SSCEEEEEECTTCSSEEEEEETT---S
T ss_pred CCC---ccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecc-------cceEEeeeecCCCceEEEEecCc---c
Confidence 100 0011111 244333333 345788899876543332211 1111223332 444 43333222 5
Q ss_pred eEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE-eeCCeEEEEEcCCC
Q 046579 300 LFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL-HLPKKAVRYNLKDR 378 (416)
Q Consensus 300 ~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-~~~~~l~~ydl~~~ 378 (416)
.+.||-+......=. +... . .+ ...+.-+++.. ++.+|+. ..++.+.+||++++
T Consensus 274 ~v~iwd~~~~~~~~~---------~~~~-~--------~h---~~~v~~~~~sp----dg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 274 TVKIWDLRQVRGKAS---------FLYS-L--------PH---RHPVNAACFSP----DGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp BCCEEETTTCCSSSC---------CSBC-C--------BC---SSCEEECCBCT----TSSEEEEEESSSCEEEEESSSS
T ss_pred eeeEEecccccccce---------EEEe-e--------ec---cccccceeECC----CCCeeEEEcCCCEEEEEECCCC
Confidence 788997764321100 0000 0 00 02233344443 4555555 45788999999886
Q ss_pred cEE
Q 046579 379 TFK 381 (416)
Q Consensus 379 ~~~ 381 (416)
...
T Consensus 329 ~~~ 331 (435)
T 4e54_B 329 DCP 331 (435)
T ss_dssp SSE
T ss_pred ccc
Confidence 643
No 43
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=71.68 E-value=58 Score=29.40 Aligned_cols=32 Identities=3% Similarity=-0.259 Sum_probs=19.3
Q ss_pred eEEEEeecCCCCCCcEEEE-eeCCeEEEEEcCCCcEE
Q 046579 346 YSILCVVREENDDDSYLVL-HLPKKAVRYNLKDRTFK 381 (416)
Q Consensus 346 ~~~~~~~~~~~~~~~~i~l-~~~~~l~~ydl~~~~~~ 381 (416)
+.-+++.. ++.+|+. ..++.+..||+++.+..
T Consensus 337 v~~~~~s~----~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 337 VDCCVFQS----NFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp EEEEEEET----TTTEEEEEETTSCEEEEEECC----
T ss_pred EEEEEEcC----CCCEEEEECCCCeEEEEeCCCCCcc
Confidence 34456654 4555555 45889999999988643
No 44
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=70.23 E-value=59 Score=28.91 Aligned_cols=122 Identities=13% Similarity=0.125 Sum_probs=64.0
Q ss_pred ccEEEEEeeC---CcEEEEEcCCceEeecCC-CCCCCcccccceeEEEEe-CCeEEEEEEecCCcCeEEEEEEeCCCCCc
Q 046579 239 NGAIHWVSTH---GSSLYFDVDQEKLREMPM-PPIPDEWEERRHQYFGES-RGHLHLIEIYGPCTALFNVYEMKTDYSGW 313 (416)
Q Consensus 239 ~G~lyw~~~~---~~il~fD~~~e~~~~i~~-P~~~~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~~l~iW~l~~~~~~W 313 (416)
+|.+|..... +.|..||+.+.+...+.. +.. . .....+... +|+..++.... ...+.+|.++.+ +..
T Consensus 50 dg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~--~---~~p~~~a~spdg~~l~~~~~~--~~~v~v~~~~~~-g~~ 121 (347)
T 3hfq_A 50 KDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAP--G---TPPAYVAVDEARQLVYSANYH--KGTAEVMKIAAD-GAL 121 (347)
T ss_dssp TCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEE--S---CCCSEEEEETTTTEEEEEETT--TTEEEEEEECTT-SCE
T ss_pred CCeEEEEEecCCCceEEEEEecCCcEEEeeeeecC--C---CCCEEEEECCCCCEEEEEeCC--CCEEEEEEeCCC-CCe
Confidence 6788877653 578999998777665432 110 0 011124433 67654444322 257999999753 344
Q ss_pred eEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEe--eCCeEEEEEcC-CCcEEEee
Q 046579 314 FVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLH--LPKKAVRYNLK-DRTFKKLH 384 (416)
Q Consensus 314 ~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~--~~~~l~~ydl~-~~~~~~v~ 384 (416)
.....+..... -|.... ......-+++.. ++. +++. .++.+..||++ ++++..+.
T Consensus 122 ~~~~~~~~~~~---~p~~~~--------~~~~~~~~~~sp----dg~-l~v~~~~~~~v~~~~~~~~g~~~~~~ 179 (347)
T 3hfq_A 122 TLTDTVQHSGH---GPRPEQ--------DGSHIHYTDLTP----DNR-LAVIDLGSDKVYVYNVSDAGQLSEQS 179 (347)
T ss_dssp EEEEEEECCCC---CSSTTC--------SSCCEEEEEECT----TSC-EEEEETTTTEEEEEEECTTSCEEEEE
T ss_pred eecceeecCCC---CCCccc--------cCCCceEEEECC----CCc-EEEEeCCCCEEEEEEECCCCcEEEee
Confidence 44444432111 011000 001233455543 455 4553 35689999998 67766554
No 45
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=69.55 E-value=24 Score=35.82 Aligned_cols=31 Identities=10% Similarity=-0.013 Sum_probs=25.3
Q ss_pred CCcEEEccEEEEEeeCCcEEEEEcCC--ceEee
Q 046579 233 RGGVFWNGAIHWVSTHGSSLYFDVDQ--EKLRE 263 (416)
Q Consensus 233 ~~~v~~~G~lyw~~~~~~il~fD~~~--e~~~~ 263 (416)
..++..+|.+|.....+.|.++|..+ +.|+.
T Consensus 71 ~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~ 103 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASWSVVHAIDTRTGNRIWTY 103 (677)
T ss_dssp CCCEEETTEEEEECGGGCEEEEETTTTEEEEEE
T ss_pred eCCEEECCEEEEECCCCeEEEEECCCCcEEEEE
Confidence 55788999999988888899999876 45764
No 46
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=68.02 E-value=52 Score=28.94 Aligned_cols=106 Identities=9% Similarity=0.027 Sum_probs=60.6
Q ss_pred EEccEEEEEeeCC---cEEEEEcCCceE-eecCCCCCCCcccccceeEEEEeCCeEEEEEEecCCcCeEEEEEEeCCCCC
Q 046579 237 FWNGAIHWVSTHG---SSLYFDVDQEKL-REMPMPPIPDEWEERRHQYFGESRGHLHLIEIYGPCTALFNVYEMKTDYSG 312 (416)
Q Consensus 237 ~~~G~lyw~~~~~---~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~l~~~~G~L~~v~~~~~~~~~l~iW~l~~~~~~ 312 (416)
+.+|.||--+... .|..+|+++.+- ..+++|+.+-. .-+...+++|+.+.-.+ . .+|+.+-. .
T Consensus 50 ~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~Fg------eGit~~g~~ly~ltw~~---~--~v~v~D~~--t 116 (262)
T 3nol_A 50 YRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFG------EGISDWKDKIVGLTWKN---G--LGFVWNIR--N 116 (262)
T ss_dssp EETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCE------EEEEEETTEEEEEESSS---S--EEEEEETT--T
T ss_pred EECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccce------eEEEEeCCEEEEEEeeC---C--EEEEEECc--c
Confidence 3467787766543 689999988654 55676643211 11455688888774322 2 35666643 2
Q ss_pred ceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEee-CCeEEEEEcCCCcEEE
Q 046579 313 WFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLHL-PKKAVRYNLKDRTFKK 382 (416)
Q Consensus 313 W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~-~~~l~~ydl~~~~~~~ 382 (416)
-.++.+|..+. ..+++.. ++..+++.. .+.+..+|++|.+...
T Consensus 117 ~~~~~ti~~~~-----------------------eG~glt~----dg~~L~~SdGs~~i~~iDp~T~~v~~ 160 (262)
T 3nol_A 117 LRQVRSFNYDG-----------------------EGWGLTH----NDQYLIMSDGTPVLRFLDPESLTPVR 160 (262)
T ss_dssp CCEEEEEECSS-----------------------CCCCEEE----CSSCEEECCSSSEEEEECTTTCSEEE
T ss_pred CcEEEEEECCC-----------------------CceEEec----CCCEEEEECCCCeEEEEcCCCCeEEE
Confidence 34566664421 0122222 355666643 6689999998866543
No 47
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=67.10 E-value=1.2e+02 Score=31.06 Aligned_cols=189 Identities=12% Similarity=0.099 Sum_probs=96.5
Q ss_pred ceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCCeeeccCCCc
Q 046579 146 RNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGPWRLSGGSFT 225 (416)
Q Consensus 146 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~ 225 (416)
..++++||.|+++..++...... ....++..|+. +. + .+.... .+..|+..++.|+.......
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~~-----~~v~~i~~d~~--g~--l-wigt~~-------Gl~~~~~~~~~~~~~~~~~~ 489 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNEL-----LDVRVFYEDKN--KK--I-WIGTHA-------GVFVIDLASKKVIHHYDTSN 489 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTCC-----CCEEEEEECTT--SE--E-EEEETT-------EEEEEESSSSSCCEEECTTT
T ss_pred CCEEEEcCCCCcEEEeccCCCCC-----CeEEEEEECCC--CC--E-EEEECC-------ceEEEeCCCCeEEecccCcc
Confidence 45788888888887775431100 12233445542 22 2 222222 67889998888876532110
Q ss_pred cccccccCCcEEE--ccEEEEEeeC-CcEEEEEcCCceEeecCCCCCCCcccccceeEEEE-eCCeEEEEEEecCCcCeE
Q 046579 226 APSVINFRGGVFW--NGAIHWVSTH-GSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGE-SRGHLHLIEIYGPCTALF 301 (416)
Q Consensus 226 ~~~~~~~~~~v~~--~G~lyw~~~~-~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~-~~G~L~~v~~~~~~~~~l 301 (416)
.......-..+.. +|.+ |++.. +.+..||..++++..+..+.. ........+.+ .+|.|.+... . .+
T Consensus 490 ~~~~~~~i~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~---l~~~~i~~i~~d~~g~lWi~T~-~----Gl 560 (781)
T 3v9f_A 490 SQLLENFVRSIAQDSEGRF-WIGTFGGGVGIYTPDMQLVRKFNQYEG---FCSNTINQIYRSSKGQMWLATG-E----GL 560 (781)
T ss_dssp SSCSCSCEEEEEECTTCCE-EEEESSSCEEEECTTCCEEEEECTTTT---CSCSCEEEEEECTTSCEEEEET-T----EE
T ss_pred cccccceeEEEEEcCCCCE-EEEEcCCCEEEEeCCCCeEEEccCCCC---CCCCeeEEEEECCCCCEEEEEC-C----Cc
Confidence 0000011112222 4554 55554 679999999999887754321 11112223444 4777776542 1 22
Q ss_pred EEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEeeCCeEEEEEcCCCcEE
Q 046579 302 NVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLHLPKKAVRYNLKDRTFK 381 (416)
Q Consensus 302 ~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~l~~ydl~~~~~~ 381 (416)
|..++...+.+.. +.... .+|. .. +.++... .++.|++.+...+..||+++++++
T Consensus 561 -v~~~d~~~~~~~~---~~~~~---gl~~-------------~~--i~~i~~d---~~g~lW~~t~~Gl~~~~~~~~~~~ 615 (781)
T 3v9f_A 561 -VCFPSARNFDYQV---FQRKE---GLPN-------------TH--IRAISED---KNGNIWASTNTGISCYITSKKCFY 615 (781)
T ss_dssp -EEESCTTTCCCEE---ECGGG---TCSC-------------CC--CCEEEEC---SSSCEEEECSSCEEEEETTTTEEE
T ss_pred -eEEECCCCCcEEE---ccccC---CCCC-------------ce--EEEEEEC---CCCCEEEEcCCceEEEECCCCceE
Confidence 1334433333321 11110 1111 11 2233332 244688988889999999999988
Q ss_pred Eeee
Q 046579 382 KLHD 385 (416)
Q Consensus 382 ~v~~ 385 (416)
....
T Consensus 616 ~~~~ 619 (781)
T 3v9f_A 616 TYDH 619 (781)
T ss_dssp EECG
T ss_pred Eecc
Confidence 7753
No 48
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=65.93 E-value=77 Score=28.60 Aligned_cols=180 Identities=11% Similarity=0.077 Sum_probs=93.1
Q ss_pred CceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCCeeec-cCC
Q 046579 145 RRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGPWRLS-GGS 223 (416)
Q Consensus 145 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~-~~~ 223 (416)
...+.|+|+.+++....-.... ....+.+.+. +.+-++. .... -.+.+|+..+++.... ...
T Consensus 95 ~~~v~v~d~~~~~~~~~~~~~~--------~~~~~~~s~d--g~~l~~~-~~~~------~~v~~~d~~~~~~~~~~~~~ 157 (391)
T 1l0q_A 95 SSTLSVIDTTSNTVAGTVKTGK--------SPLGLALSPD--GKKLYVT-NNGD------KTVSVINTVTKAVINTVSVG 157 (391)
T ss_dssp TTEEEEEETTTTEEEEEEECSS--------SEEEEEECTT--SSEEEEE-ETTT------TEEEEEETTTTEEEEEEECC
T ss_pred CCEEEEEECCCCeEEEEEeCCC--------CcceEEECCC--CCEEEEE-eCCC------CEEEEEECCCCcEEEEEecC
Confidence 4679999999988765432221 1234556653 3443232 2211 2788999888765432 111
Q ss_pred CccccccccCCcEEE--ccE-EEEEee-CCcEEEEEcCCceEee-cCCCCCCCcccccceeEEEEe-CCeEEEEEEecCC
Q 046579 224 FTAPSVINFRGGVFW--NGA-IHWVST-HGSSLYFDVDQEKLRE-MPMPPIPDEWEERRHQYFGES-RGHLHLIEIYGPC 297 (416)
Q Consensus 224 ~~~~~~~~~~~~v~~--~G~-lyw~~~-~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~-~G~L~~v~~~~~~ 297 (416)
.. ...+.+ +|. +|.... ++.|..+|+.+.+... +.... ....+... +|+..++...+..
T Consensus 158 ~~-------~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~g~~l~~~~~~~~ 222 (391)
T 1l0q_A 158 RS-------PKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA--------APSGIAVNPEGTKAYVTNVDKY 222 (391)
T ss_dssp SS-------EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS--------EEEEEEECTTSSEEEEEEECSS
T ss_pred CC-------cceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC--------CccceEECCCCCEEEEEecCcC
Confidence 00 012222 453 443333 3568899998876543 22211 11123333 5655555443212
Q ss_pred cCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEe--eCCeEEEEEc
Q 046579 298 TALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLH--LPKKAVRYNL 375 (416)
Q Consensus 298 ~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~--~~~~l~~ydl 375 (416)
...+.+|-++.. .....+... ....-+++.. ++..|++. .++.+..||+
T Consensus 223 ~~~v~~~d~~~~----~~~~~~~~~---------------------~~~~~~~~s~----dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 223 FNTVSMIDTGTN----KITARIPVG---------------------PDPAGIAVTP----DGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp CCEEEEEETTTT----EEEEEEECC---------------------SSEEEEEECT----TSSEEEEEETTTTEEEEEET
T ss_pred CCcEEEEECCCC----eEEEEEecC---------------------CCccEEEEcc----CCCEEEEEcCCCCEEEEEEC
Confidence 357888877632 334444221 0112244433 46667664 4789999999
Q ss_pred CCCcEEEeee
Q 046579 376 KDRTFKKLHD 385 (416)
Q Consensus 376 ~~~~~~~v~~ 385 (416)
++++......
T Consensus 274 ~~~~~~~~~~ 283 (391)
T 1l0q_A 274 ATNTITATMA 283 (391)
T ss_dssp TTTEEEEEEE
T ss_pred CCCcEEEEEE
Confidence 9988766543
No 49
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=65.73 E-value=22 Score=36.14 Aligned_cols=31 Identities=6% Similarity=0.018 Sum_probs=25.2
Q ss_pred CCcEEEccEEEEEeeCCcEEEEEcCC--ceEee
Q 046579 233 RGGVFWNGAIHWVSTHGSSLYFDVDQ--EKLRE 263 (416)
Q Consensus 233 ~~~v~~~G~lyw~~~~~~il~fD~~~--e~~~~ 263 (416)
..++..+|.+|.....+.|.++|..+ +.|+.
T Consensus 64 ~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~ 96 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPFSVVYALDARDGRLIWKY 96 (689)
T ss_dssp CCCEEETTEEEEECGGGCEEEEETTTCCEEEEE
T ss_pred ecCEEECCEEEEEcCCCeEEEEECCCCceeEEE
Confidence 45778999999988888899999865 56764
No 50
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=65.55 E-value=1.2e+02 Score=30.89 Aligned_cols=213 Identities=12% Similarity=0.136 Sum_probs=100.0
Q ss_pred eCceEEeeecCCCCCCceEEEEccCCcceEecCCCCc-CCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEE
Q 046579 130 CNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHV-DRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIE 208 (416)
Q Consensus 130 ~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~-~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~ 208 (416)
.+|-+.+... ...++++||.++++..+..... +.... ......+..|+. +..-| .... .+.
T Consensus 224 ~~g~lwigt~-----~~Gl~~~~~~~~~~~~~~~~~~~~~~l~-~~~i~~i~~d~~--g~lWi---gt~~-------Gl~ 285 (795)
T 4a2l_A 224 SPTRIWVATE-----GAGLFLINPKTKEIKNYLHSPSNPKSIS-SNYIRSLAMDSQ--NRLWI---GTFN-------DLN 285 (795)
T ss_dssp ETTEEEEEEB-----SSCEEEEETTTTEEEEECCCTTCTTSCS-CSBEEEEEECTT--SCEEE---EESS-------CEE
T ss_pred CCCCEEEEEC-----CCCeEEEeCCCCeEEEeecCCCCccccC-CCeEEEEEEcCC--CCEEE---EeCC-------hhh
Confidence 4555555442 2348899999988877643321 01100 012233455543 33322 2221 467
Q ss_pred EEECCCCCeeeccCCCcccccccc--CCcEEE--ccEEEEEeeCCcEEEEEcCCceEeecCCCCCCCcccccceeEEEEe
Q 046579 209 IYSSKTGPWRLSGGSFTAPSVINF--RGGVFW--NGAIHWVSTHGSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGES 284 (416)
Q Consensus 209 vyss~t~~W~~~~~~~~~~~~~~~--~~~v~~--~G~lyw~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~ 284 (416)
+|+..++.+............+.. -..++. +|.++.-...+.|..+|..+..|..+...+............+.+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d 365 (795)
T 4a2l_A 286 IYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVED 365 (795)
T ss_dssp EEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEEC
T ss_pred eEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEEC
Confidence 888888888765321110001111 122333 4554433344679999998888876643222222111122234333
Q ss_pred -CCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEE
Q 046579 285 -RGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLV 363 (416)
Q Consensus 285 -~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 363 (416)
+|.|.+... . ..+..| +...+.+.... ...- .+.. .. ....+.++.... ++.+|+
T Consensus 366 ~~g~lWiGt~-~---~Gl~~~--~~~~~~~~~~~---~~~~---~~~~--------~l--~~~~v~~i~~d~--~g~~lW 421 (795)
T 4a2l_A 366 KDKNLWIGTN-D---GGLNLY--NPITQRFTSYT---LQED---ESAR--------GI--GSNNIKAVYVDE--KKSLVY 421 (795)
T ss_dssp TTSCEEEEES-S---SCEEEE--CTTTCCEEEEC---CC-----------------CC--SCSCEEEEEEET--TTTEEE
T ss_pred CCCCEEEEEC-C---CCeEEE--cCCCCcEEEEe---cCCC---Cccc--------CC--CCccEEEEEEcC--CCCEEE
Confidence 667776432 1 123333 32223332211 0000 0000 00 001233443321 344488
Q ss_pred EeeC-CeEEEEEcCCCcEEEee
Q 046579 364 LHLP-KKAVRYNLKDRTFKKLH 384 (416)
Q Consensus 364 l~~~-~~l~~ydl~~~~~~~v~ 384 (416)
+.+. +.|+.||.++++++.+.
T Consensus 422 igt~~~Gl~~~d~~~~~~~~~~ 443 (795)
T 4a2l_A 422 IGTHAGGLSILHRNSGQVENFN 443 (795)
T ss_dssp EEETTTEEEEEETTTCCEEEEC
T ss_pred EEeCcCceeEEeCCCCcEEEee
Confidence 8764 79999999999988765
No 51
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=65.28 E-value=79 Score=28.51 Aligned_cols=177 Identities=12% Similarity=0.050 Sum_probs=90.4
Q ss_pred CceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCCeeec-cCC
Q 046579 145 RRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGPWRLS-GGS 223 (416)
Q Consensus 145 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~-~~~ 223 (416)
...+.|||..+++....-.... ....+.+.+. +.+-++ ..... -.+.+++..+++-... ...
T Consensus 11 d~~v~v~d~~~~~~~~~~~~~~--------~~~~~~~s~d--g~~l~~-~~~~d------~~i~v~d~~~~~~~~~~~~~ 73 (391)
T 1l0q_A 11 SDNISVIDVTSNKVTATIPVGS--------NPMGAVISPD--GTKVYV-ANAHS------NDVSIIDTATNNVIATVPAG 73 (391)
T ss_dssp TTEEEEEETTTTEEEEEEECSS--------SEEEEEECTT--SSEEEE-EEGGG------TEEEEEETTTTEEEEEEECS
T ss_pred CCEEEEEECCCCeEEEEeecCC--------CcceEEECCC--CCEEEE-ECCCC------CeEEEEECCCCeEEEEEECC
Confidence 5679999999988765322211 1233556653 343322 22222 1788999888764332 111
Q ss_pred CccccccccCCcEEE--ccE-EEEEee-CCcEEEEEcCCceEee-cCCCCCCCcccccceeEEEEe-CCeEEEEEEecCC
Q 046579 224 FTAPSVINFRGGVFW--NGA-IHWVST-HGSSLYFDVDQEKLRE-MPMPPIPDEWEERRHQYFGES-RGHLHLIEIYGPC 297 (416)
Q Consensus 224 ~~~~~~~~~~~~v~~--~G~-lyw~~~-~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~-~G~L~~v~~~~~~ 297 (416)
. .-..+.+ +|. +|.... ++.|..+|+.+.+... +.... ....+... +|+..++....
T Consensus 74 ~-------~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~--------~~~~~~~s~dg~~l~~~~~~-- 136 (391)
T 1l0q_A 74 S-------SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK--------SPLGLALSPDGKKLYVTNNG-- 136 (391)
T ss_dssp S-------SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS--------SEEEEEECTTSSEEEEEETT--
T ss_pred C-------CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC--------CcceEEECCCCCEEEEEeCC--
Confidence 1 0111222 354 444443 3679999998866543 32211 11123333 56654443322
Q ss_pred cCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEe--eCCeEEEEEc
Q 046579 298 TALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLH--LPKKAVRYNL 375 (416)
Q Consensus 298 ~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~--~~~~l~~ydl 375 (416)
...+.+|.++.. .....+... ....-+++.. ++..+++. .++.+..||+
T Consensus 137 ~~~v~~~d~~~~----~~~~~~~~~---------------------~~~~~~~~~~----dg~~l~~~~~~~~~v~~~d~ 187 (391)
T 1l0q_A 137 DKTVSVINTVTK----AVINTVSVG---------------------RSPKGIAVTP----DGTKVYVANFDSMSISVIDT 187 (391)
T ss_dssp TTEEEEEETTTT----EEEEEEECC---------------------SSEEEEEECT----TSSEEEEEETTTTEEEEEET
T ss_pred CCEEEEEECCCC----cEEEEEecC---------------------CCcceEEECC----CCCEEEEEeCCCCEEEEEEC
Confidence 257888876532 222322211 1113344543 45566553 4678999999
Q ss_pred CCCcEEEee
Q 046579 376 KDRTFKKLH 384 (416)
Q Consensus 376 ~~~~~~~v~ 384 (416)
++++.....
T Consensus 188 ~~~~~~~~~ 196 (391)
T 1l0q_A 188 VTNSVIDTV 196 (391)
T ss_dssp TTTEEEEEE
T ss_pred CCCeEEEEE
Confidence 998766554
No 52
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=64.93 E-value=46 Score=32.87 Aligned_cols=31 Identities=6% Similarity=0.036 Sum_probs=25.1
Q ss_pred CCcEEEccEEEEEee-CCcEEEEEc-CC--ceEee
Q 046579 233 RGGVFWNGAIHWVST-HGSSLYFDV-DQ--EKLRE 263 (416)
Q Consensus 233 ~~~v~~~G~lyw~~~-~~~il~fD~-~~--e~~~~ 263 (416)
..++..+|.+|.... ++.+.++|. .+ +.|+.
T Consensus 56 ~~P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~ 90 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQH 90 (571)
T ss_dssp SCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEE
T ss_pred cccEEECCEEEEEeCCCCEEEEEeCCCCccEEEEE
Confidence 567888999999988 788999998 55 55764
No 53
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=62.97 E-value=83 Score=27.94 Aligned_cols=112 Identities=5% Similarity=-0.053 Sum_probs=57.9
Q ss_pred eeCCcEEEEEcCCc--eEeec-CCCCCCCcccccceeEEEEe-C---CeEEEEEEecCCcCeEEEEEEeCCCCCceEEEE
Q 046579 246 STHGSSLYFDVDQE--KLREM-PMPPIPDEWEERRHQYFGES-R---GHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYR 318 (416)
Q Consensus 246 ~~~~~il~fD~~~e--~~~~i-~~P~~~~~~~~~~~~~l~~~-~---G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~ 318 (416)
..++.|..+|+.+. .+..+ .+... . .....+.-. + |++.+....+ ..+.||.++.....+....
T Consensus 179 ~~dg~i~i~d~~~~~~~~~~~~~~~~h--~---~~v~~~~~sp~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~- 249 (379)
T 3jrp_A 179 GADNLVKIWKYNSDAQTYVLESTLEGH--S---DWVRDVAWSPTVLLRSYLASVSQD---RTCIIWTQDNEQGPWKKTL- 249 (379)
T ss_dssp ETTSCEEEEEEETTTTEEEEEEEECCC--S---SCEEEEEECCCCSSSEEEEEEETT---SCEEEEEESSTTSCCEEEE-
T ss_pred eCCCeEEEEEecCCCcceeeEEEEecc--c---CcEeEEEECCCCCCCCeEEEEeCC---CEEEEEeCCCCCccceeee-
Confidence 34567888998653 23322 11111 0 111223333 4 6666655433 5799999986543333221
Q ss_pred EcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE-eeCCeEEEEEcC-CCcEEEeeecCC
Q 046579 319 VDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL-HLPKKAVRYNLK-DRTFKKLHDVAP 388 (416)
Q Consensus 319 i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-~~~~~l~~ydl~-~~~~~~v~~~~~ 388 (416)
+.... . ...+.-+++.. ++.+|+. ..++.+.+||++ .++|+.+..+..
T Consensus 250 ~~~~~-------~-----------~~~v~~~~~s~----~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~ 299 (379)
T 3jrp_A 250 LKEEK-------F-----------PDVLWRASWSL----SGNVLALSGGDNKVTLWKENLEGKWEPAGEVHQ 299 (379)
T ss_dssp SSSSC-------C-----------SSCEEEEEECS----SSCCEEEEESSSSEEEEEEEETTEEEEEEEEC-
T ss_pred ecccc-------C-----------CCcEEEEEEcC----CCCEEEEecCCCcEEEEeCCCCCccccccceec
Confidence 11100 0 02233455543 3555555 568899999998 566777776544
No 54
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=61.39 E-value=1.4e+02 Score=29.96 Aligned_cols=190 Identities=11% Similarity=0.009 Sum_probs=95.1
Q ss_pred ceEEEEccCCcce--EecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCCeeeccCC
Q 046579 146 RNYYVYNPTNKQY--TILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGPWRLSGGS 223 (416)
Q Consensus 146 ~~~~V~NP~T~~~--~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~ 223 (416)
..+++++.-|++. ..+-..+... ....+..+.|. +.|-++...... ....+.+.+..++.|+.+...
T Consensus 202 ~~v~~~~l~t~~~~~~lv~~~~~~~-----~~~~~~~~SpD--G~~l~~~~~~~~----~~~~l~~~~~~~~~~~~l~~~ 270 (695)
T 2bkl_A 202 TTIRYHTLGTEPSKDTVVHERTGDP-----TTFLQSDLSRD--GKYLFVYILRGW----SENDVYWKRPGEKDFRLLVKG 270 (695)
T ss_dssp CEEEEEETTSCGGGCEEEECCCCCT-----TCEEEEEECTT--SCCEEEEEEETT----TEEEEEEECTTCSSCEEEEEC
T ss_pred CEEEEEECCCCchhceEEEecCCCC-----EEEEEEEECCC--CCEEEEEEeCCC----CceEEEEEcCCCCceEEeecC
Confidence 3488888887762 2222211100 11223445553 466555543331 123455556666778766322
Q ss_pred CccccccccCCcEEEccEEEEEee----CCcEEEEEcCCce---EeecCCCCCCCcccccceeEEEEeCCeEEEEEEecC
Q 046579 224 FTAPSVINFRGGVFWNGAIHWVST----HGSSLYFDVDQEK---LREMPMPPIPDEWEERRHQYFGESRGHLHLIEIYGP 296 (416)
Q Consensus 224 ~~~~~~~~~~~~v~~~G~lyw~~~----~~~il~fD~~~e~---~~~i~~P~~~~~~~~~~~~~l~~~~G~L~~v~~~~~ 296 (416)
... ....+..+|.+|+... ...|..+|+++.. |..+-. ..+.. ....+...+++|.+....+
T Consensus 271 ~~~-----~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~-~~~~~----~l~~~~~~~~~lv~~~~~d- 339 (695)
T 2bkl_A 271 VGA-----KYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVP-EDSSA----SLLSVSIVGGHLSLEYLKD- 339 (695)
T ss_dssp SSC-----CEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEEC-CCSSC----EEEEEEEETTEEEEEEEET-
T ss_pred CCc-----eEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEec-CCCCC----eEEEEEEECCEEEEEEEEC-
Confidence 211 1223335666777665 2479999997643 665522 21111 1112334488887776544
Q ss_pred CcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE-e----eCCeEE
Q 046579 297 CTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL-H----LPKKAV 371 (416)
Q Consensus 297 ~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-~----~~~~l~ 371 (416)
....||.++-..+ ....+.++. . ..+.++... .++..+++ . .+..++
T Consensus 340 --g~~~l~~~~~~g~---~~~~l~~~~-------~--------------~~v~~~~~s--~d~~~l~~~~ss~~~P~~v~ 391 (695)
T 2bkl_A 340 --ATSEVRVATLKGK---PVRTVQLPG-------V--------------GAASNLMGL--EDLDDAYYVFTSFTTPRQIY 391 (695)
T ss_dssp --TEEEEEEEETTCC---EEEECCCSS-------S--------------SEECCCBSC--TTCSEEEEEEEETTEEEEEE
T ss_pred --CEEEEEEEeCCCC---eeEEecCCC-------C--------------eEEEEeecC--CCCCEEEEEEcCCCCCCEEE
Confidence 4678888884221 333343211 0 011222111 13433433 2 246899
Q ss_pred EEEcCCCcEEEeee
Q 046579 372 RYNLKDRTFKKLHD 385 (416)
Q Consensus 372 ~ydl~~~~~~~v~~ 385 (416)
.||+++++.+.+..
T Consensus 392 ~~d~~~g~~~~l~~ 405 (695)
T 2bkl_A 392 KTSVSTGKSELWAK 405 (695)
T ss_dssp EEETTTCCEEEEEE
T ss_pred EEECCCCcEEEEec
Confidence 99999998776654
No 55
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=61.32 E-value=50 Score=32.76 Aligned_cols=31 Identities=10% Similarity=0.084 Sum_probs=24.6
Q ss_pred CCcEEEccEEEEEeeCCcEEEEEcCC--ceEee
Q 046579 233 RGGVFWNGAIHWVSTHGSSLYFDVDQ--EKLRE 263 (416)
Q Consensus 233 ~~~v~~~G~lyw~~~~~~il~fD~~~--e~~~~ 263 (416)
..++..+|.+|.....+.+.++|.++ +.|+.
T Consensus 62 ~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~ 94 (582)
T 1flg_A 62 SQAIVSDGVIYVTASYSRLFALDAKTGKRLWTY 94 (582)
T ss_dssp CCCEEETTEEEEEETTTEEEEEESSSCCEEEEE
T ss_pred eccEEECCEEEEEcCCCCEEEEECCCCcEEEEE
Confidence 55788999999988756699999865 56765
No 56
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=61.31 E-value=91 Score=27.86 Aligned_cols=118 Identities=9% Similarity=0.073 Sum_probs=64.6
Q ss_pred ccE-EEEEee-CCcEEEEEcCCceEeecC-CCCCCCcccccceeEEEEe-CCeEEEEEEecCCcCeEEEEEEeCCCCCce
Q 046579 239 NGA-IHWVST-HGSSLYFDVDQEKLREMP-MPPIPDEWEERRHQYFGES-RGHLHLIEIYGPCTALFNVYEMKTDYSGWF 314 (416)
Q Consensus 239 ~G~-lyw~~~-~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~ 314 (416)
+|. +|.... .+.|..||+.+.++..+. .+..+.... ....+... +|+..++.... ....+.||.++...+.+.
T Consensus 221 dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~--~~~~i~~spdg~~l~v~~~~-~~~~i~v~~~~~~~g~~~ 297 (361)
T 3scy_A 221 DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQ--GSGDIHLSPDGKYLYASNRL-KADGVAIFKVDETNGTLT 297 (361)
T ss_dssp TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCC--CEEEEEECTTSSEEEEEECS-SSCEEEEEEECTTTCCEE
T ss_pred CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCC--CcccEEECCCCCEEEEECCC-CCCEEEEEEEcCCCCcEE
Confidence 564 555552 467889998877665432 111111111 11224333 77755554332 135799999985556666
Q ss_pred EEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEee--CCeEEE--EEcCCCcEEEee
Q 046579 315 VKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLHL--PKKAVR--YNLKDRTFKKLH 384 (416)
Q Consensus 315 ~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~--~~~l~~--ydl~~~~~~~v~ 384 (416)
....+... ..| .-+++.. ++..|++.. ++.+.+ +|.++++++.+.
T Consensus 298 ~~~~~~~g----~~~-----------------~~~~~sp----dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 298 KVGYQLTG----IHP-----------------RNFIITP----NGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp EEEEEECS----SCC-----------------CEEEECT----TSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred EeeEecCC----CCC-----------------ceEEECC----CCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 66655321 011 1244543 566777753 455555 677788888765
No 57
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=59.71 E-value=94 Score=27.52 Aligned_cols=152 Identities=13% Similarity=0.151 Sum_probs=72.8
Q ss_pred EEEEEECC-CCCeeeccC-CCccccccccCCcEEEccE-EEEEeeC-CcEEEEEcC--CceEeecC-CCCCCCcccc-cc
Q 046579 206 QIEIYSSK-TGPWRLSGG-SFTAPSVINFRGGVFWNGA-IHWVSTH-GSSLYFDVD--QEKLREMP-MPPIPDEWEE-RR 277 (416)
Q Consensus 206 ~~~vyss~-t~~W~~~~~-~~~~~~~~~~~~~v~~~G~-lyw~~~~-~~il~fD~~--~e~~~~i~-~P~~~~~~~~-~~ 277 (416)
.+.+|+.. ++....... ..... .....-.+.-+|. +|..... +.|..||+. +.++..+. ....+..... ..
T Consensus 163 ~v~~~~~~~~g~~~~~~~~~~~~g-~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 241 (347)
T 3hfq_A 163 KVYVYNVSDAGQLSEQSVLTMEAG-FGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNG 241 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCTT-CCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCE
T ss_pred EEEEEEECCCCcEEEeeeEEcCCC-CCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCc
Confidence 78888887 566553321 00000 0000011122565 5554433 456666665 45554321 1111111100 01
Q ss_pred eeEEEEe-CCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCC
Q 046579 278 HQYFGES-RGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREEN 356 (416)
Q Consensus 278 ~~~l~~~-~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (416)
...+... +|+..++.... ...+.||.++.. +.+.....+.... ....-+++..
T Consensus 242 ~~~i~~spdG~~l~v~~~~--~~~v~v~~~~~~-g~~~~~~~~~~~~--------------------~~~~~~~~sp--- 295 (347)
T 3hfq_A 242 AAAIRLSHDGHFLYVSNRG--YNTLAVFAVTAD-GHLTLIQQISTEG--------------------DFPRDFDLDP--- 295 (347)
T ss_dssp EEEEEECTTSCEEEEEEET--TTEEEEEEECGG-GCEEEEEEEECSS--------------------SCCCEEEECT---
T ss_pred ceeEEECCCCCEEEEEeCC--CCEEEEEEECCC-CcEEEeEEEecCC--------------------CCcCeEEECC---
Confidence 1123333 77754444332 257999999843 3455555543211 0112345543
Q ss_pred CCCcEEEEee--CCeEEEE--EcCCCcEEEeee
Q 046579 357 DDDSYLVLHL--PKKAVRY--NLKDRTFKKLHD 385 (416)
Q Consensus 357 ~~~~~i~l~~--~~~l~~y--dl~~~~~~~v~~ 385 (416)
++..|++.. ++.+..| |.++++++.+..
T Consensus 296 -dg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 296 -TEAFVVVVNQNTDNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp -TSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred -CCCEEEEEEcCCCcEEEEEEeCCCCeEEeccc
Confidence 566777743 4677777 778899887764
No 58
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=59.70 E-value=92 Score=27.40 Aligned_cols=207 Identities=10% Similarity=-0.034 Sum_probs=98.4
Q ss_pred eCceEEeeecCCCCCCceEEEEccCCcceEe-cCCCCcCC-CcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEE
Q 046579 130 CNGLLLCSSSRAYQPRRNYYVYNPTNKQYTI-LPRLHVDR-GIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQI 207 (416)
Q Consensus 130 ~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~-~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~ 207 (416)
.++.+++... ....+.++|+.|++... ++...... .........++.++|. +.+-++ ..... .-.+
T Consensus 99 dg~~l~v~~~----~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d--g~~l~~-~~~~~-----~~~i 166 (353)
T 3vgz_A 99 TTQTLWFGNT----VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDA--TNTVYI-SGIGK-----ESVI 166 (353)
T ss_dssp TTTEEEEEET----TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETT--TTEEEE-EEESS-----SCEE
T ss_pred CCCEEEEEec----CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCC--CCEEEE-EecCC-----CceE
Confidence 3344555543 24679999999988643 33321100 0000011234666664 344322 22111 1268
Q ss_pred EEEECCCCCeeeccCCCccccccccCCcEEEcc-EEEEEeeCCcEEEEEcCCceEe-ecCCCCCCCcccccceeEEEEe-
Q 046579 208 EIYSSKTGPWRLSGGSFTAPSVINFRGGVFWNG-AIHWVSTHGSSLYFDVDQEKLR-EMPMPPIPDEWEERRHQYFGES- 284 (416)
Q Consensus 208 ~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G-~lyw~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~l~~~- 284 (416)
.+|+..+++=...-..... ....-.+.-+| .+|.....+.|..+|+.+.+.. .+..+..... .....+...
T Consensus 167 ~~~d~~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~s~ 240 (353)
T 3vgz_A 167 WVVDGGNIKLKTAIQNTGK---MSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKE---HFFINISLDT 240 (353)
T ss_dssp EEEETTTTEEEEEECCCCT---TCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSC---CCEEEEEEET
T ss_pred EEEcCCCCceEEEecCCCC---ccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCC---cccceEEECC
Confidence 8888877643211000000 00111222255 4666555678999999886653 3444321111 011113333
Q ss_pred CCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE
Q 046579 285 RGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL 364 (416)
Q Consensus 285 ~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l 364 (416)
+|+..++.... ...+.+|-++. ......+.... + .-+++.. ++..+|+
T Consensus 241 dg~~l~~~~~~--~~~v~~~d~~~----~~~~~~~~~~~-----~-----------------~~~~~s~----dg~~l~v 288 (353)
T 3vgz_A 241 ARQRAFITDSK--AAEVLVVDTRN----GNILAKVAAPE-----S-----------------LAVLFNP----ARNEAYV 288 (353)
T ss_dssp TTTEEEEEESS--SSEEEEEETTT----CCEEEEEECSS-----C-----------------CCEEEET----TTTEEEE
T ss_pred CCCEEEEEeCC--CCEEEEEECCC----CcEEEEEEcCC-----C-----------------ceEEECC----CCCEEEE
Confidence 55533443322 24677775543 22334443211 1 0134443 4566666
Q ss_pred e--eCCeEEEEEcCCCcEEEeeec
Q 046579 365 H--LPKKAVRYNLKDRTFKKLHDV 386 (416)
Q Consensus 365 ~--~~~~l~~ydl~~~~~~~v~~~ 386 (416)
. .++.+..||+++++.......
T Consensus 289 ~~~~~~~v~~~d~~~~~~~~~~~~ 312 (353)
T 3vgz_A 289 THRQAGKVSVIDAKSYKVVKTFDT 312 (353)
T ss_dssp EETTTTEEEEEETTTTEEEEEEEC
T ss_pred EECCCCeEEEEECCCCeEEEEEec
Confidence 4 368999999999887655433
No 59
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=59.30 E-value=99 Score=27.64 Aligned_cols=191 Identities=9% Similarity=-0.006 Sum_probs=79.5
Q ss_pred CceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCC-eeeccCC
Q 046579 145 RRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGP-WRLSGGS 223 (416)
Q Consensus 145 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~-W~~~~~~ 223 (416)
++.+.|||..++.+..+-..... . .....+.+.|. +.+ ++...... .+.+|+..++. |......
T Consensus 32 d~~i~iw~~~~~~~~~~~~~~~h---~--~~v~~~~~s~~--~~~-l~s~s~d~-------~v~vwd~~~~~~~~~~~~~ 96 (377)
T 3dwl_C 32 TNQVELYEQDGNGWKHARTFSDH---D--KIVTCVDWAPK--SNR-IVTCSQDR-------NAYVYEKRPDGTWKQTLVL 96 (377)
T ss_dssp SSCBCEEEEETTEEEECCCBCCC---S--SCEEEEEECTT--TCC-EEEEETTS-------SEEEC------CCCCEEEC
T ss_pred CCEEEEEEccCCceEEEEEEecC---C--ceEEEEEEeCC--CCE-EEEEeCCC-------eEEEEEcCCCCceeeeeEe
Confidence 45678899888865444333221 1 12234556553 233 22222222 68888888776 5543211
Q ss_pred CccccccccCCcEEE--ccE-EEEEeeCCcEEEEEcCCce----EeecCCCCCCCcccccceeEEEEe-CCeEEEEEEec
Q 046579 224 FTAPSVINFRGGVFW--NGA-IHWVSTHGSSLYFDVDQEK----LREMPMPPIPDEWEERRHQYFGES-RGHLHLIEIYG 295 (416)
Q Consensus 224 ~~~~~~~~~~~~v~~--~G~-lyw~~~~~~il~fD~~~e~----~~~i~~P~~~~~~~~~~~~~l~~~-~G~L~~v~~~~ 295 (416)
.... ..-..+.+ +|. +.-...++.|..+|+.+.+ ...+..|.. .....+.-. +|++.+....+
T Consensus 97 ~~~~---~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~------~~v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 97 LRLN---RAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLR------STILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp CCCS---SCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCC------SCEEEEEECTTSSEEEEEESS
T ss_pred cccC---CceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccC------CCeEEEEEcCCCCEEEEEeCC
Confidence 0000 00001111 332 3333344567888887654 223332211 111223333 56655554433
Q ss_pred CCcCeEEEEEEeCCC-------CCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE-eeC
Q 046579 296 PCTALFNVYEMKTDY-------SGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL-HLP 367 (416)
Q Consensus 296 ~~~~~l~iW~l~~~~-------~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-~~~ 367 (416)
..+.||.++... ..|...... ..+...+ . +...+.-+++.. ++.+|+. ..+
T Consensus 168 ---~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~-----------~~~~v~~~~~sp----~~~~l~~~~~d 226 (377)
T 3dwl_C 168 ---RKAYVLSAYVRDVDAKPEASVWGSRLPF--NTVCAEY-P-----------SGGWVHAVGFSP----SGNALAYAGHD 226 (377)
T ss_dssp ---SCEEEEEECCSSCC-CCCSCSSCSCCCE--EEEEECC-C-----------CSSSEEEEEECT----TSSCEEEEETT
T ss_pred ---CEEEEEEEEecccCCCccccccccccch--hhhhhcc-c-----------CCceEEEEEECC----CCCEEEEEeCC
Confidence 579999986311 123221000 0000000 0 012344455544 3444444 567
Q ss_pred CeEEEEEcCCCcE
Q 046579 368 KKAVRYNLKDRTF 380 (416)
Q Consensus 368 ~~l~~ydl~~~~~ 380 (416)
+.+..||+++++.
T Consensus 227 ~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 227 SSVTIAYPSAPEQ 239 (377)
T ss_dssp TEEC-CEECSTTS
T ss_pred CcEEEEECCCCCC
Confidence 8999999998875
No 60
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=59.16 E-value=1.1e+02 Score=30.39 Aligned_cols=31 Identities=6% Similarity=0.149 Sum_probs=25.1
Q ss_pred CCcEEEccEEEEEee-CCcEEEEEc-CC--ceEee
Q 046579 233 RGGVFWNGAIHWVST-HGSSLYFDV-DQ--EKLRE 263 (416)
Q Consensus 233 ~~~v~~~G~lyw~~~-~~~il~fD~-~~--e~~~~ 263 (416)
..++..+|.+|.... ++.+.++|. .+ +.|+.
T Consensus 56 ~tP~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~ 90 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFPNNTFALGLDDPGTILWQD 90 (599)
T ss_dssp SCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEE
T ss_pred eccEEECCEEEEEeCCCCEEEEEeCCCCCcEEEEE
Confidence 567888999999887 788999999 55 46764
No 61
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=58.70 E-value=90 Score=26.98 Aligned_cols=197 Identities=11% Similarity=0.017 Sum_probs=0.0
Q ss_pred EEeeeCceEEeeecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEe---------
Q 046579 126 VLQSCNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRN--------- 196 (416)
Q Consensus 126 ~~~s~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~--------- 196 (416)
+.-+.+|.+++... ....++++||.+++...+......... .....+.+|+ .+.+-+.....
T Consensus 74 l~~~~dg~l~v~~~----~~~~i~~~d~~~g~~~~~~~~~~~~~~---~~~~~i~~d~--~G~l~vtd~~~g~~~~~~~~ 144 (296)
T 3e5z_A 74 HCLNKQGHLIACSH----GLRRLERQREPGGEWESIADSFEGKKL---NSPNDVCLAP--DGSLWFSDPTYGIDKPEEGY 144 (296)
T ss_dssp EEECTTCCEEEEET----TTTEEEEECSTTCCEEEEECEETTEEC---CCCCCEEECT--TSCEEEEECSHHHHCGGGSS
T ss_pred eeECCCCcEEEEec----CCCeEEEEcCCCCcEEEEeeccCCCCC---CCCCCEEECC--CCCEEEECCccccccccccc
Q ss_pred -------cCCCCCCceEEEEEECCCCCeeeccCCCccccccccCCcEEEccEEEEEeeCC--cEEEEEcC-CceE-eecC
Q 046579 197 -------CDSLRDGHYQIEIYSSKTGPWRLSGGSFTAPSVINFRGGVFWNGAIHWVSTHG--SSLYFDVD-QEKL-REMP 265 (416)
Q Consensus 197 -------~~~~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~--~il~fD~~-~e~~-~~i~ 265 (416)
.. .+..|+.. ++-+........+ ..-.+.-+|.++ ++... .|..||+. +.++ ....
T Consensus 145 ~~~~~~~~~-------~l~~~~~~-g~~~~~~~~~~~~----~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~ 211 (296)
T 3e5z_A 145 GGEMELPGR-------WVFRLAPD-GTLSAPIRDRVKP----NGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGV 211 (296)
T ss_dssp CCCCCSSSC-------EEEEECTT-SCEEEEECCCSSE----EEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEE
T ss_pred cccccCCCc-------EEEEECCC-CCEEEeecCCCCC----ccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCe
Q ss_pred CCCCCCcccccceeEEEEe-CCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCcee
Q 046579 266 MPPIPDEWEERRHQYFGES-RGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYY 344 (416)
Q Consensus 266 ~P~~~~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~ 344 (416)
.- ......... +... +|+|++.. . ..+.+|..+. .+...+..+. .
T Consensus 212 ~~-~~~~~~p~~---i~~d~~G~l~v~~--~---~~v~~~~~~g-----~~~~~~~~~~--------------------~ 257 (296)
T 3e5z_A 212 HF-TVEPGKTDG---LRVDAGGLIWASA--G---DGVHVLTPDG-----DELGRVLTPQ--------------------T 257 (296)
T ss_dssp EE-CCSSSCCCS---EEEBTTSCEEEEE--T---TEEEEECTTS-----CEEEEEECSS--------------------C
T ss_pred Ee-eCCCCCCCe---EEECCCCCEEEEc--C---CeEEEECCCC-----CEEEEEECCC--------------------C
Q ss_pred eeEEEEeecCCCCCCcEEEEeeCCeEEEEEcCCCcEEE
Q 046579 345 GYSILCVVREENDDDSYLVLHLPKKAVRYNLKDRTFKK 382 (416)
Q Consensus 345 ~~~~~~~~~~~~~~~~~i~l~~~~~l~~ydl~~~~~~~ 382 (416)
..-+++... ++..|++.....++.++++++++++
T Consensus 258 -~~~~~f~~~---d~~~L~v~t~~~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 258 -TSNLCFGGP---EGRTLYMTVSTEFWSIETNVRGLEH 291 (296)
T ss_dssp -CCEEEEEST---TSCEEEEEETTEEEEEECSCCBCCC
T ss_pred -ceeEEEECC---CCCEEEEEcCCeEEEEEcccccccc
No 62
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=58.12 E-value=1e+02 Score=27.47 Aligned_cols=36 Identities=17% Similarity=0.247 Sum_probs=25.3
Q ss_pred EEEeecCCCCCCcEEEEee--CCeEEEEEcCCCcEEEeeecC
Q 046579 348 ILCVVREENDDDSYLVLHL--PKKAVRYNLKDRTFKKLHDVA 387 (416)
Q Consensus 348 ~~~~~~~~~~~~~~i~l~~--~~~l~~ydl~~~~~~~v~~~~ 387 (416)
-+++.. ++..+++.. ++.+..||+++++++.+..+.
T Consensus 215 ~~~~sp----dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~ 252 (361)
T 3scy_A 215 HLIFNS----DGKFAYLINEIGGTVIAFRYADGMLDEIQTVA 252 (361)
T ss_dssp EEEECT----TSSEEEEEETTTCEEEEEEEETTEEEEEEEEE
T ss_pred EEEEcC----CCCEEEEEcCCCCeEEEEEecCCceEEeEEEe
Confidence 355543 566777643 679999999999887776543
No 63
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=57.19 E-value=1.2e+02 Score=27.75 Aligned_cols=182 Identities=12% Similarity=0.104 Sum_probs=90.3
Q ss_pred CceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCCeeeccCCC
Q 046579 145 RRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGPWRLSGGSF 224 (416)
Q Consensus 145 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~ 224 (416)
++.+.|||..+++...+-.... . .....+.+.|. +.+-+ ...... .+.+|+..++.-...-...
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~~----~--~~v~~v~~s~~--~~~l~--~~~~dg------~i~iwd~~~~~~~~~~~~~ 175 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETDE----S--TYVASVKWSHD--GSFLS--VGLGNG------LVDIYDVESQTKLRTMAGH 175 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECCT----T--CCEEEEEECTT--SSEEE--EEETTS------CEEEEETTTCCEEEEECCC
T ss_pred CCeEEEeeCCCCcEeEeeecCC----C--CCEEEEEECCC--CCEEE--EECCCC------eEEEEECcCCeEEEEecCC
Confidence 5679999999998776543321 1 12233556553 34422 222221 6888998877543221110
Q ss_pred ccccccccCCcEEEccE-EEEEeeCCcEEEEEcCCce--EeecCCCCCCCcccccceeEEEEe-CCeEEEEEEecCCcCe
Q 046579 225 TAPSVINFRGGVFWNGA-IHWVSTHGSSLYFDVDQEK--LREMPMPPIPDEWEERRHQYFGES-RGHLHLIEIYGPCTAL 300 (416)
Q Consensus 225 ~~~~~~~~~~~v~~~G~-lyw~~~~~~il~fD~~~e~--~~~i~~P~~~~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~~ 300 (416)
. ..-..+..+|. +.-...++.|..+|+.+.. ...+.... .....+.-. +|++.++...+ ..
T Consensus 176 ~-----~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~s~~~d---~~ 240 (401)
T 4aez_A 176 Q-----ARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHS-------SEVCGLAWRSDGLQLASGGND---NV 240 (401)
T ss_dssp S-----SCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCS-------SCEEEEEECTTSSEEEEEETT---SC
T ss_pred C-----CceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCC-------CCeeEEEEcCCCCEEEEEeCC---Ce
Confidence 0 01122333554 3333445678899987422 22221110 111223333 66665554433 57
Q ss_pred EEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEe---eCCeEEEEEcCC
Q 046579 301 FNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLH---LPKKAVRYNLKD 377 (416)
Q Consensus 301 l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~---~~~~l~~ydl~~ 377 (416)
+.||-+... .....+... . ..+.-+++... +..++... .++.+..||+++
T Consensus 241 v~iwd~~~~----~~~~~~~~~------~--------------~~v~~~~~~p~---~~~ll~~~~gs~d~~i~i~d~~~ 293 (401)
T 4aez_A 241 VQIWDARSS----IPKFTKTNH------N--------------AAVKAVAWCPW---QSNLLATGGGTMDKQIHFWNAAT 293 (401)
T ss_dssp EEEEETTCS----SEEEEECCC------S--------------SCCCEEEECTT---STTEEEEECCTTTCEEEEEETTT
T ss_pred EEEccCCCC----CccEEecCC------c--------------ceEEEEEECCC---CCCEEEEecCCCCCEEEEEECCC
Confidence 999987742 222222110 0 12234555432 23344444 378999999998
Q ss_pred CcEEEee
Q 046579 378 RTFKKLH 384 (416)
Q Consensus 378 ~~~~~v~ 384 (416)
++.....
T Consensus 294 ~~~~~~~ 300 (401)
T 4aez_A 294 GARVNTV 300 (401)
T ss_dssp CCEEEEE
T ss_pred CCEEEEE
Confidence 8765544
No 64
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=56.71 E-value=1e+02 Score=27.03 Aligned_cols=30 Identities=13% Similarity=-0.003 Sum_probs=18.2
Q ss_pred eEEEEeecCCCCCCcEEEE--eeCCeEEEEEcCCCc
Q 046579 346 YSILCVVREENDDDSYLVL--HLPKKAVRYNLKDRT 379 (416)
Q Consensus 346 ~~~~~~~~~~~~~~~~i~l--~~~~~l~~ydl~~~~ 379 (416)
+.-+++.. ++..+++ ..++.+..||+.+.+
T Consensus 324 v~~~~~s~----~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 324 ISSLDWSP----DKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEEEECS----SSTTEEEEEETTSEEEEEEECC--
T ss_pred eeEEEEcC----CCCeEEEEecCCCcEEEEECCCcc
Confidence 34455543 3555553 558899999998653
No 65
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=56.17 E-value=56 Score=32.99 Aligned_cols=32 Identities=19% Similarity=0.145 Sum_probs=25.8
Q ss_pred cCCcEEEccEEEEEeeCCcEEEEEcCC--ceEee
Q 046579 232 FRGGVFWNGAIHWVSTHGSSLYFDVDQ--EKLRE 263 (416)
Q Consensus 232 ~~~~v~~~G~lyw~~~~~~il~fD~~~--e~~~~ 263 (416)
...++..+|.+|.....+.+.++|..+ +.|+.
T Consensus 59 ~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~ 92 (668)
T 1kv9_A 59 EATPLFHDGVIYTSMSWSRVIAVDAASGKELWRY 92 (668)
T ss_dssp CCCCEEETTEEEEEEGGGEEEEEETTTCCEEEEE
T ss_pred ccCCEEECCEEEEECCCCeEEEEECCCChhceEE
Confidence 356778999999998888999999865 56764
No 66
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=56.10 E-value=1.8e+02 Score=29.66 Aligned_cols=195 Identities=12% Similarity=0.105 Sum_probs=96.0
Q ss_pred eEEEEccCCcceEecCCCCcC-C-CcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCCeeeccCCC
Q 046579 147 NYYVYNPTNKQYTILPRLHVD-R-GIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGPWRLSGGSF 224 (416)
Q Consensus 147 ~~~V~NP~T~~~~~LP~~~~~-~-~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~ 224 (416)
.++.+||.++++...+..... . ... .....++..|.. +. ++.+.... -.+..|+..++.++......
T Consensus 378 Gl~~~~~~~~~~~~~~~~~~~~~~~l~-~~~v~~i~~d~~--g~--~lWigt~~------~Gl~~~d~~~~~~~~~~~~~ 446 (795)
T 4a2l_A 378 GLNLYNPITQRFTSYTLQEDESARGIG-SNNIKAVYVDEK--KS--LVYIGTHA------GGLSILHRNSGQVENFNQRN 446 (795)
T ss_dssp CEEEECTTTCCEEEECCC------CCS-CSCEEEEEEETT--TT--EEEEEETT------TEEEEEETTTCCEEEECTTT
T ss_pred CeEEEcCCCCcEEEEecCCCCcccCCC-CccEEEEEEcCC--CC--EEEEEeCc------CceeEEeCCCCcEEEeecCC
Confidence 577888888887766532210 0 000 012233444532 23 11222221 16788888888876553211
Q ss_pred -ccccccccCCcEEE--ccEEEEEeeCCcEEEEEcCCceEeecCCCCCCCcccccceeEEEE-eCCeEEEEEEecCCcCe
Q 046579 225 -TAPSVINFRGGVFW--NGAIHWVSTHGSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGE-SRGHLHLIEIYGPCTAL 300 (416)
Q Consensus 225 -~~~~~~~~~~~v~~--~G~lyw~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~-~~G~L~~v~~~~~~~~~ 300 (416)
... ...-..+.. +|.+ |++....+..||..+.+|..+.....+..........+.+ .+|.|.+... . .
T Consensus 447 ~~l~--~~~v~~i~~d~~g~l-wigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~----G 518 (795)
T 4a2l_A 447 SQLV--NENVYAILPDGEGNL-WLGTLSALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E----G 518 (795)
T ss_dssp SCCS--CSCEEEEEECSSSCE-EEEESSCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S----C
T ss_pred CCcC--CCeeEEEEECCCCCE-EEEecCceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-C----c
Confidence 010 001112222 4555 4444477999999999998775331111111112223433 4777877643 2 3
Q ss_pred EEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEeeCCeEEEEEcCCCcE
Q 046579 301 FNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLHLPKKAVRYNLKDRTF 380 (416)
Q Consensus 301 l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~l~~ydl~~~~~ 380 (416)
+..|..+. +.+ .+..... .+.+. ...+.++... .++.|++.+.+.++.||.+++++
T Consensus 519 l~~~~~~~--~~~----~~~~~~~---~~~l~------------~~~i~~i~~d---~~g~lWigT~~Gl~~~d~~~~~~ 574 (795)
T 4a2l_A 519 LSVFKQEG--LDI----QKASILP---VSNVT------------KLFTNCIYEA---SNGIIWVGTREGFYCFNEKDKQI 574 (795)
T ss_dssp EEEEEEET--TEE----EECCCSC---SCGGG------------GSCEEEEEEC---TTSCEEEEESSCEEEEETTTTEE
T ss_pred eEEEeCCC--CeE----EEecCCC---CCCCC------------CCeeEEEEEC---CCCCEEEEeCCCceeECCCCCcE
Confidence 55555443 233 1110000 01110 1124445442 24468888877999999999998
Q ss_pred EEee
Q 046579 381 KKLH 384 (416)
Q Consensus 381 ~~v~ 384 (416)
+...
T Consensus 575 ~~~~ 578 (795)
T 4a2l_A 575 KRYN 578 (795)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 8765
No 67
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=55.29 E-value=30 Score=26.02 Aligned_cols=44 Identities=16% Similarity=0.250 Sum_probs=29.2
Q ss_pred ceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEec
Q 046579 146 RNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNC 197 (416)
Q Consensus 146 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~ 197 (416)
..+++++|.|++|...-... + ...+.+..|+. .+.|+|+.....
T Consensus 11 A~V~~~d~~~~~W~p~~~~~---g----~s~V~~~~d~~-~~~yrIv~~~l~ 54 (112)
T 1evh_A 11 AAVMVYDDANKKWVPAGGST---G----FSRVHIYHHTG-NNTFRVVGRKIQ 54 (112)
T ss_dssp EEEEEEETTTTEEEEGGGCC---S----CEEEEEEEETT-TTEEEEEEEETT
T ss_pred EEEEEEcCCCCceEECCCCC---C----ceEEEEEEECC-CCEEEEEEEECC
Confidence 35899999999875433211 1 24466788876 468999877643
No 68
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=54.68 E-value=1.2e+02 Score=27.21 Aligned_cols=187 Identities=7% Similarity=-0.068 Sum_probs=90.6
Q ss_pred CceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCCeeeccCCC
Q 046579 145 RRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGPWRLSGGSF 224 (416)
Q Consensus 145 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~ 224 (416)
++.+.|||..+++....-.... +. .....+.+.|. +.-.++...... .+.+++..++..+......
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~---h~--~~v~~~~~~~~--~~~~l~s~~~d~-------~i~iwd~~~~~~~~~~~~~ 160 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQGMG---PG--DAITGMKFNQF--NTNQLFVSSIRG-------ATTLRDFSGSVIQVFAKTD 160 (383)
T ss_dssp TSCEEEEETTSTTCEEEECCCS---TT--CBEEEEEEETT--EEEEEEEEETTT-------EEEEEETTSCEEEEEECCC
T ss_pred CCeEEEEeCCCcccceeeecCC---cC--CceeEEEeCCC--CCCEEEEEeCCC-------EEEEEECCCCceEEEeccC
Confidence 3457888888877665433211 01 12223445442 123333332222 7888998876655442211
Q ss_pred ccccccccCCcEEEccE-EEEEeeCCcEEEEEcCCceEeecCCCCCCCcccccceeEEEEe-CCe-EEEEEEecCCcCeE
Q 046579 225 TAPSVINFRGGVFWNGA-IHWVSTHGSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGES-RGH-LHLIEIYGPCTALF 301 (416)
Q Consensus 225 ~~~~~~~~~~~v~~~G~-lyw~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~G~-L~~v~~~~~~~~~l 301 (416)
... .....-...-+|. +.....++.|..+|+..+....+.... .....+.-. +|+ +.+....+ ..+
T Consensus 161 ~~~-~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~-------~~v~~~~~~~~~~~~l~s~~~d---~~i 229 (383)
T 3ei3_B 161 SWD-YWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHK-------AKVTHAEFNPRCDWLMATSSVD---ATV 229 (383)
T ss_dssp CSS-CCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSS-------SCEEEEEECSSCTTEEEEEETT---SEE
T ss_pred CCC-CCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCC-------CcEEEEEECCCCCCEEEEEeCC---CEE
Confidence 100 0000001111333 323334467888999766555443221 111223333 555 55544333 589
Q ss_pred EEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE-eeCCeEEEEEcCCCcE
Q 046579 302 NVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL-HLPKKAVRYNLKDRTF 380 (416)
Q Consensus 302 ~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-~~~~~l~~ydl~~~~~ 380 (416)
.||.+......-.....+... ..+.-+++... ++.+|+. ..++.+..||+++++.
T Consensus 230 ~iwd~~~~~~~~~~~~~~~~~---------------------~~v~~~~~s~~---~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 230 KLWDLRNIKDKNSYIAEMPHE---------------------KPVNAAYFNPT---DSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp EEEEGGGCCSTTCEEEEEECS---------------------SCEEEEEECTT---TSCEEEEEESSSEEEEEETTBTTS
T ss_pred EEEeCCCCCcccceEEEecCC---------------------CceEEEEEcCC---CCCEEEEEcCCCcEEEEECCCCcc
Confidence 999988643223333333110 22334555431 3445554 5678999999998764
No 69
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=53.69 E-value=1.2e+02 Score=26.99 Aligned_cols=37 Identities=5% Similarity=0.068 Sum_probs=22.2
Q ss_pred EEEEeecCCCCCCcEEEEeeCCeEEEEEcCCCcEEEeeecC
Q 046579 347 SILCVVREENDDDSYLVLHLPKKAVRYNLKDRTFKKLHDVA 387 (416)
Q Consensus 347 ~~~~~~~~~~~~~~~i~l~~~~~l~~ydl~~~~~~~v~~~~ 387 (416)
.-+++.. ++.+|....++.++.|+.....++.+..++
T Consensus 255 ~~~~~s~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (377)
T 3dwl_C 255 RSLLWAN----ESAIVAAGYNYSPILLQGNESGWAHTRDLD 291 (377)
T ss_dssp EEEEEEE----TTEEEEEESSSSEEEECCCC---CCSBCCC
T ss_pred EEEEEcC----CCCEEEEEcCCcEEEEEeCCCceEEEeeec
Confidence 3455554 466676677778888988876665555444
No 70
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=52.62 E-value=83 Score=27.71 Aligned_cols=132 Identities=10% Similarity=-0.058 Sum_probs=0.0
Q ss_pred EEEccEEEEEeeC-CcEEEEEcCCceE-eecCCCCCCCcccccceeEEEEeCCeEEEEEEecCCcCeEEEEEEeCCCCCc
Q 046579 236 VFWNGAIHWVSTH-GSSLYFDVDQEKL-REMPMPPIPDEWEERRHQYFGESRGHLHLIEIYGPCTALFNVYEMKTDYSGW 313 (416)
Q Consensus 236 v~~~G~lyw~~~~-~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~l~~~~G~L~~v~~~~~~~~~l~iW~l~~~~~~W 313 (416)
.+.+|.||--+.. +.|..+|+++.+- ..+ +|+..-... +...+++|+.+.-.+ ..+-|+-.+ .-
T Consensus 61 ~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeG------it~~g~~Ly~ltw~~---~~v~V~D~~----Tl 126 (268)
T 3nok_A 61 VFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEG------LASDGERLYQLTWTE---GLLFTWSGM----PP 126 (268)
T ss_dssp EEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEE------EEECSSCEEEEESSS---CEEEEEETT----TT
T ss_pred EEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeE------EEEeCCEEEEEEccC---CEEEEEECC----cC
Q ss_pred eEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEee-CCeEEEEEcCCCcEEEeeecCCCCCC
Q 046579 314 FVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLHL-PKKAVRYNLKDRTFKKLHDVAPAGNQ 392 (416)
Q Consensus 314 ~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~-~~~l~~ydl~~~~~~~v~~~~~~~~~ 392 (416)
.++.+|..+. ..+++.. ++..+|+.. .+.+..+|.+|.+...--.+.. +.
T Consensus 127 ~~~~ti~~~~-----------------------eGwGLt~----Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~--~g 177 (268)
T 3nok_A 127 QRERTTRYSG-----------------------EGWGLCY----WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL--RG 177 (268)
T ss_dssp EEEEEEECSS-----------------------CCCCEEE----ETTEEEEECSSSEEEEECTTTCCEEEEEECEE--TT
T ss_pred cEEEEEeCCC-----------------------ceeEEec----CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC--CC
Q ss_pred cchhhhhhhccccccccc
Q 046579 393 AEDESALQFRWFDAFQYT 410 (416)
Q Consensus 393 ~~~~~~~~~~~~~~~~y~ 410 (416)
.+-..-+++.|.+..+|+
T Consensus 178 ~~v~~lNeLe~~dG~lya 195 (268)
T 3nok_A 178 QPVELINELECANGVIYA 195 (268)
T ss_dssp EECCCEEEEEEETTEEEE
T ss_pred cccccccccEEeCCEEEE
No 71
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=52.54 E-value=1.2e+02 Score=26.43 Aligned_cols=123 Identities=10% Similarity=-0.006 Sum_probs=64.4
Q ss_pred cc-EEEEEe-eCCcEEEEEcCC-ceEee-----cCCCCCCCcccccceeEEEEe-CCeEEEEEEecCCcCeEEEEEEeCC
Q 046579 239 NG-AIHWVS-THGSSLYFDVDQ-EKLRE-----MPMPPIPDEWEERRHQYFGES-RGHLHLIEIYGPCTALFNVYEMKTD 309 (416)
Q Consensus 239 ~G-~lyw~~-~~~~il~fD~~~-e~~~~-----i~~P~~~~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~~l~iW~l~~~ 309 (416)
+| .+|... .++.|..||+.+ .+... +..+.. . ....+.-. +|+..++.... ...+.||.++..
T Consensus 139 dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~pdg~~l~~~~~~--~~~i~~~~~~~~ 210 (343)
T 1ri6_A 139 DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEG---A---GPRHMVFHPNEQYAYCVNEL--NSSVDVWELKDP 210 (343)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTT---C---CEEEEEECTTSSEEEEEETT--TTEEEEEESSCT
T ss_pred CCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCC---C---CcceEEECCCCCEEEEEeCC--CCEEEEEEecCC
Confidence 45 355544 456789999987 65542 222211 0 11123332 66644443322 357999999765
Q ss_pred CCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEe--eCCeEEEEEcC--CCcEEEeee
Q 046579 310 YSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLH--LPKKAVRYNLK--DRTFKKLHD 385 (416)
Q Consensus 310 ~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~--~~~~l~~ydl~--~~~~~~v~~ 385 (416)
.+.+.....+... +.-. .. .....-+++.. ++..+++. .++.+..||++ +++.+.+..
T Consensus 211 ~g~~~~~~~~~~~------~~~~----~~----~~~~~~i~~s~----dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~ 272 (343)
T 1ri6_A 211 HGNIECVQTLDMM------PENF----SD----TRWAADIHITP----DGRHLYACDRTASLITVFSVSEDGSVLSKEGF 272 (343)
T ss_dssp TSCCEEEEEEECS------CTTC----CS----CCCEEEEEECT----TSSEEEEEETTTTEEEEEEECTTSCCEEEEEE
T ss_pred CCcEEEEeecccc------Cccc----cc----cCCccceEECC----CCCEEEEEecCCCEEEEEEEcCCCCceEEeee
Confidence 5566555544311 1100 00 01122355543 46667664 46799999998 666776665
Q ss_pred cC
Q 046579 386 VA 387 (416)
Q Consensus 386 ~~ 387 (416)
+.
T Consensus 273 ~~ 274 (343)
T 1ri6_A 273 QP 274 (343)
T ss_dssp EE
T ss_pred ec
Confidence 43
No 72
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=51.97 E-value=1.1e+02 Score=26.01 Aligned_cols=135 Identities=11% Similarity=0.057 Sum_probs=68.8
Q ss_pred EEeeeCceEEeeecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCce
Q 046579 126 VLQSCNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHY 205 (416)
Q Consensus 126 ~~~s~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~ 205 (416)
+....+|.+.+... ....++++|| +++...+..+.. . ....++.+|+. +. +...... .-
T Consensus 104 i~~~~~g~l~v~~~----~~~~i~~~d~-~g~~~~~~~~~~--~----~~~~~i~~~~~--g~--l~v~~~~------~~ 162 (299)
T 2z2n_A 104 ITEGPNGDIWFTEM----NGNRIGRITD-DGKIREYELPNK--G----SYPSFITLGSD--NA--LWFTENQ------NN 162 (299)
T ss_dssp EEECTTSCEEEEET----TTTEEEEECT-TCCEEEEECSST--T----CCEEEEEECTT--SC--EEEEETT------TT
T ss_pred eEECCCCCEEEEec----CCceEEEECC-CCCEEEecCCCC--C----CCCceEEEcCC--CC--EEEEeCC------CC
Confidence 33334677666553 2456899999 777665433221 0 12234666754 22 2222211 11
Q ss_pred EEEEEECCCCCeeeccCCCccccccccCCcEEE--ccEEEEEee-CCcEEEEEcCCceEeecCCCCCCCcccccceeEEE
Q 046579 206 QIEIYSSKTGPWRLSGGSFTAPSVINFRGGVFW--NGAIHWVST-HGSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFG 282 (416)
Q Consensus 206 ~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~-~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~ 282 (416)
.+.+|+. ++.......+... ....++.+ +|.+|+... .+.|..||. +.++..+..|.... ....+.
T Consensus 163 ~i~~~~~-~g~~~~~~~~~~~----~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~-----~~~~i~ 231 (299)
T 2z2n_A 163 AIGRITE-SGDITEFKIPTPA----SGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNA-----RPHAIT 231 (299)
T ss_dssp EEEEECT-TCCEEEEECSSTT----CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTC-----CEEEEE
T ss_pred EEEEEcC-CCcEEEeeCCCCC----CcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCC-----CceeEE
Confidence 6777887 6766543211111 11123333 577766553 457999999 66676665542111 111233
Q ss_pred E-eCCeEEEEE
Q 046579 283 E-SRGHLHLIE 292 (416)
Q Consensus 283 ~-~~G~L~~v~ 292 (416)
. .+|+|++..
T Consensus 232 ~~~~g~l~v~~ 242 (299)
T 2z2n_A 232 AGAGIDLWFTE 242 (299)
T ss_dssp ECSTTCEEEEE
T ss_pred ECCCCCEEEec
Confidence 3 377877654
No 73
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=51.65 E-value=1.2e+02 Score=26.47 Aligned_cols=104 Identities=7% Similarity=-0.118 Sum_probs=58.8
Q ss_pred cEEEEEee---CCcEEEEEcCCceE-eecCCCCCCCcccccceeEEEEeCCeEEEEEEecCCcCeEEEEEEeCCCCCceE
Q 046579 240 GAIHWVST---HGSSLYFDVDQEKL-REMPMPPIPDEWEERRHQYFGESRGHLHLIEIYGPCTALFNVYEMKTDYSGWFV 315 (416)
Q Consensus 240 G~lyw~~~---~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~l~~~~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~ 315 (416)
|.||--+. ...|..+|+.+.+- ..+++|..+.. .-+...+++|+++.-.+ .. |++.+-. .-..
T Consensus 32 g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fg------eGi~~~g~~lyv~t~~~---~~--v~viD~~--t~~v 98 (266)
T 2iwa_A 32 DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFG------EGLTLLNEKLYQVVWLK---NI--GFIYDRR--TLSN 98 (266)
T ss_dssp TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCE------EEEEEETTEEEEEETTC---SE--EEEEETT--TTEE
T ss_pred CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcce------EEEEEeCCEEEEEEecC---CE--EEEEECC--CCcE
Confidence 67777654 35799999987654 55666543221 11444577888774311 22 5666643 3456
Q ss_pred EEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEe-eCCeEEEEEcCCCcEEE
Q 046579 316 KYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLH-LPKKAVRYNLKDRTFKK 382 (416)
Q Consensus 316 ~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~-~~~~l~~ydl~~~~~~~ 382 (416)
+.+|..+ . |+ .+++.. ++..+|+. ..+.+..+|.++.+...
T Consensus 99 ~~~i~~g--~---~~-----------------g~glt~----Dg~~l~vs~gs~~l~viD~~t~~v~~ 140 (266)
T 2iwa_A 99 IKNFTHQ--M---KD-----------------GWGLAT----DGKILYGSDGTSILYEIDPHTFKLIK 140 (266)
T ss_dssp EEEEECC--S---SS-----------------CCEEEE----CSSSEEEECSSSEEEEECTTTCCEEE
T ss_pred EEEEECC--C---CC-----------------eEEEEE----CCCEEEEECCCCeEEEEECCCCcEEE
Confidence 6666543 0 11 122222 34455553 46799999999877543
No 74
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=49.91 E-value=23 Score=27.14 Aligned_cols=40 Identities=15% Similarity=0.355 Sum_probs=27.2
Q ss_pred ceEEEEccCCc-ceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEE
Q 046579 146 RNYYVYNPTNK-QYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVR 195 (416)
Q Consensus 146 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~ 195 (416)
-.++++||.|+ .|... ... ...+.+.+|+. .+.|+|+.+.
T Consensus 11 A~V~~~D~~tk~~W~p~--g~~-------~~~V~~~~d~~-~~~yRIv~~~ 51 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPT--SKH-------AVTVSYFYDST-RNVYRIISLD 51 (120)
T ss_dssp EEEEEECTTTSCSEEES--CSS-------CEEEEEEEETT-TTEEEEEEEE
T ss_pred EEEEEEcCCCCCceEeC--CCC-------ceEEEEEEcCC-CCEEEEEEcc
Confidence 35899999996 88543 221 13455777877 4679999865
No 75
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=48.31 E-value=2.9e+02 Score=29.69 Aligned_cols=206 Identities=11% Similarity=0.073 Sum_probs=98.7
Q ss_pred EeeeCceEEeeecCCCCCCceEEEEccCCcceEe-cCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCce
Q 046579 127 LQSCNGLLLCSSSRAYQPRRNYYVYNPTNKQYTI-LPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHY 205 (416)
Q Consensus 127 ~~s~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~ 205 (416)
.-+.+|-.++... .++.+.|||..|++... +.... .....+.+.|. +.+-+. .....
T Consensus 622 ~~s~~~~~l~s~~----~d~~i~vw~~~~~~~~~~~~~h~--------~~v~~~~~s~~--~~~l~s-~~~d~------- 679 (1249)
T 3sfz_A 622 CFSQDGQRIASCG----ADKTLQVFKAETGEKLLDIKAHE--------DEVLCCAFSSD--DSYIAT-CSADK------- 679 (1249)
T ss_dssp EECTTSSEEEEEE----TTSCEEEEETTTCCEEEEECCCS--------SCEEEEEECTT--SSEEEE-EETTS-------
T ss_pred EECCCCCEEEEEe----CCCeEEEEECCCCCEEEEeccCC--------CCEEEEEEecC--CCEEEE-EeCCC-------
Confidence 3344555544443 35679999999987653 33211 12234556653 344332 22222
Q ss_pred EEEEEECCCCCeeeccCCCccccccccCCcEEE----cc-EEEEEeeCCcEEEEEcCCceEee-cCCCCCCCccccccee
Q 046579 206 QIEIYSSKTGPWRLSGGSFTAPSVINFRGGVFW----NG-AIHWVSTHGSSLYFDVDQEKLRE-MPMPPIPDEWEERRHQ 279 (416)
Q Consensus 206 ~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~----~G-~lyw~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~ 279 (416)
.+.+++..+++-...-...... -..+.+ ++ .+..-..++.|..+|+.+.+... +.... ....
T Consensus 680 ~v~vwd~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~-------~~v~ 747 (1249)
T 3sfz_A 680 KVKIWDSATGKLVHTYDEHSEQ-----VNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHT-------NSVN 747 (1249)
T ss_dssp EEEEEETTTCCEEEEEECCSSC-----EEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCS-------SCEE
T ss_pred eEEEEECCCCceEEEEcCCCCc-----EEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCC-------CCEE
Confidence 7999999887643221000000 011111 12 12223345678889998765433 22111 1111
Q ss_pred EEEEe-CCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCC
Q 046579 280 YFGES-RGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDD 358 (416)
Q Consensus 280 ~l~~~-~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (416)
.+.-. +|++.+....+ ..+.+|.+... .....+........... +.......+.-+++.. +
T Consensus 748 ~~~~sp~~~~l~s~s~d---g~v~vwd~~~~----~~~~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~s~----d 809 (1249)
T 3sfz_A 748 HCRFSPDDELLASCSAD---GTLRLWDVRSA----NERKSINVKRFFLSSED-------PPEDVEVIVKCCSWSA----D 809 (1249)
T ss_dssp EEEECSSTTEEEEEESS---SEEEEEEGGGT----EEEEEEECCCCC---------------CCCCCBCCCCBCT----T
T ss_pred EEEEecCCCEEEEEECC---CeEEEEeCCCC----cccceecccccccccCC-------ccccccceEEEEEECC----C
Confidence 23322 66655554433 57999988753 22333332221110000 0000001122233432 5
Q ss_pred CcEEEEeeCCeEEEEEcCCCcEEEee
Q 046579 359 DSYLVLHLPKKAVRYNLKDRTFKKLH 384 (416)
Q Consensus 359 ~~~i~l~~~~~l~~ydl~~~~~~~v~ 384 (416)
+..++...++.+..||+.++......
T Consensus 810 g~~l~~~~~~~v~~~d~~~~~~~~~~ 835 (1249)
T 3sfz_A 810 GDKIIVAAKNKVLLFDIHTSGLLAEI 835 (1249)
T ss_dssp SSEEEEEETTEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCcEEEEEecCCCceeEE
Confidence 67777778889999999988765443
No 76
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=46.98 E-value=1.4e+02 Score=32.09 Aligned_cols=179 Identities=8% Similarity=0.005 Sum_probs=86.1
Q ss_pred CceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCCeeeccCCC
Q 046579 145 RRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGPWRLSGGSF 224 (416)
Q Consensus 145 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~ 224 (416)
.+.+.+||..+++......... ..... +.+.|. +.+-+ .. ..+ -.+.+|+..++.........
T Consensus 982 ~g~i~i~d~~~~~~~~~~~~h~-----~~v~~--l~~s~d--g~~l~-s~-~~d------g~i~vwd~~~~~~~~~~~~~ 1044 (1249)
T 3sfz_A 982 DGAIKIIELPNNRVFSSGVGHK-----KAVRH--IQFTAD--GKTLI-SS-SED------SVIQVWNWQTGDYVFLQAHQ 1044 (1249)
T ss_dssp TSCCEEEETTTTSCEEECCCCS-----SCCCC--EEECSS--SSCEE-EE-CSS------SBEEEEETTTTEEECCBCCS
T ss_pred CCCEEEEEcCCCceeeecccCC-----CceEE--EEECCC--CCEEE-EE-cCC------CEEEEEECCCCceEEEecCC
Confidence 4567888888776554322111 01222 344443 33322 22 211 16889998888765432111
Q ss_pred ccccccccCCcEEEccEEEEEeeCCcEEEEEcCCceEe-ecCCCCCCCcccccceeEEEE-eCCeEEEEEEecCCcCeEE
Q 046579 225 TAPSVINFRGGVFWNGAIHWVSTHGSSLYFDVDQEKLR-EMPMPPIPDEWEERRHQYFGE-SRGHLHLIEIYGPCTALFN 302 (416)
Q Consensus 225 ~~~~~~~~~~~v~~~G~lyw~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~l~~-~~G~L~~v~~~~~~~~~l~ 302 (416)
...... ...-+|.+.-...++.|..+|+.+.+.. .+..... ....+.. .+|++.+....+ ..+.
T Consensus 1045 ~~v~~~----~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~-------~v~~~~~s~d~~~l~s~s~d---~~v~ 1110 (1249)
T 3sfz_A 1045 ETVKDF----RLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQG-------TVLSCAISSDATKFSSTSAD---KTAK 1110 (1249)
T ss_dssp SCEEEE----EECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSS-------CCCCEEECSSSSSCEEECCS---SCCC
T ss_pred CcEEEE----EEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCC-------cEEEEEECCCCCEEEEEcCC---CcEE
Confidence 000000 1111455555555678888998775532 2221110 0111222 255554443322 5688
Q ss_pred EEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE-eeCCeEEEEEcCCCcEE
Q 046579 303 VYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL-HLPKKAVRYNLKDRTFK 381 (416)
Q Consensus 303 iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-~~~~~l~~ydl~~~~~~ 381 (416)
||.++...... ++ ... ...+.-+++.. ++.+|.. ..++.+..||+.+++..
T Consensus 1111 iwd~~~~~~~~----~l---------~~h-----------~~~v~~~~~s~----dg~~lat~~~dg~i~vwd~~~~~~~ 1162 (1249)
T 3sfz_A 1111 IWSFDLLSPLH----EL---------KGH-----------NGCVRCSAFSL----DGILLATGDDNGEIRIWNVSDGQLL 1162 (1249)
T ss_dssp EECSSSSSCSB----CC---------CCC-----------SSCEEEEEECS----SSSEEEEEETTSCCCEEESSSSCCC
T ss_pred EEECCCcceee----ee---------ccC-----------CCcEEEEEECC----CCCEEEEEeCCCEEEEEECCCCceE
Confidence 99776432111 11 000 02234455554 4556555 45788999999987754
Q ss_pred E
Q 046579 382 K 382 (416)
Q Consensus 382 ~ 382 (416)
.
T Consensus 1163 ~ 1163 (1249)
T 3sfz_A 1163 H 1163 (1249)
T ss_dssp C
T ss_pred E
Confidence 3
No 77
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=45.54 E-value=2.6e+02 Score=28.38 Aligned_cols=216 Identities=9% Similarity=0.062 Sum_probs=96.4
Q ss_pred EEeeeCce-EEeeecCCCCCCceEEEEccCCcceEecCCCC-cCCCcceeeeeEEEEeCCCCCCCeEEEEEEe-cCCCCC
Q 046579 126 VLQSCNGL-LLCSSSRAYQPRRNYYVYNPTNKQYTILPRLH-VDRGIFRSIFGVNLAFDPSKSAHYKVICVRN-CDSLRD 202 (416)
Q Consensus 126 ~~~s~~GL-vl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~-~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~-~~~~~~ 202 (416)
+....+|. |.+... ...++.+||.|+++..++... ...... ......+..|.. .+. .+. +.. ..
T Consensus 71 i~~d~~g~~lWigt~-----~~Gl~~~d~~~~~f~~~~~~~~~~~~l~-~~~i~~i~~d~~-~~g-~lw-i~t~~~---- 137 (781)
T 3v9f_A 71 VYTDPVQPVIWIATQ-----RAGLNAYNYETQSFSVYQYNPEDPQSLI-TNDVTHITSSVQ-AGK-GLW-VCTYYR---- 137 (781)
T ss_dssp EEECSSSSEEEEEES-----SSCEEEEETTTTEEEEECCCTTCSSSCS-CSCEEEEEECSS-TTS-EEE-EEESSS----
T ss_pred EEEcCCCCEEEEEeC-----CCCcceECCCCCeEEeeccccCCCCCcc-cCcceEEEecCc-cCC-CEE-EEECCC----
Confidence 44445576 666542 225899999999988774321 111110 011223444431 011 222 222 22
Q ss_pred CceEEEEEECCCCCeeeccCCCccccccccCCcEEE--ccEEEEEeeCCcEEEEEcCCceEeecCCCC-CCCccccccee
Q 046579 203 GHYQIEIYSSKTGPWRLSGGSFTAPSVINFRGGVFW--NGAIHWVSTHGSSLYFDVDQEKLREMPMPP-IPDEWEERRHQ 279 (416)
Q Consensus 203 ~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~il~fD~~~e~~~~i~~P~-~~~~~~~~~~~ 279 (416)
.+..|+..+++++..............-..++. +|.++.......|..||..+.++..+...+ .+.........
T Consensus 138 ---gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~ 214 (781)
T 3v9f_A 138 ---GIEYLDIATGKFTHYNKSTVPALPSEQTWTATEAEDGKLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVR 214 (781)
T ss_dssp ---CEEEEETTTTEEEEESTTTCTTCSCCCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEECC--------CCSSEE
T ss_pred ---CeeEEECCCCeEEeeccCcccCCCccceEEEEECCCCCEEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCcee
Confidence 567788888877655321100000001112332 566554333447999999998887654221 11111111222
Q ss_pred EEEE-eCCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCC
Q 046579 280 YFGE-SRGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDD 358 (416)
Q Consensus 280 ~l~~-~~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (416)
.+.+ .+|.|.+.. . . -|..++...+.+.....-.... ..+ ....+.++... .
T Consensus 215 ~i~~d~~g~lwigt--~---~--Gl~~~d~~~~~~~~~~~~~~~~-----~~l------------~~~~i~~i~~d---~ 267 (781)
T 3v9f_A 215 CIYKDTNGNIWIGT--S---K--GLALFNANTETFTNFHNNPGNI-----HGA------------LSSYIFSIKQL---K 267 (781)
T ss_dssp EEEECTTCCEEEEE--T---T--EEEEEETTTTEEEC----------------------------CCCCEEEEEEC---T
T ss_pred EEEEcCCCCEEEEe--C---C--cHheECCCCCcEEEEEcCCCcc-----ccc------------cCceEEEEEEC---C
Confidence 3433 366677653 1 1 2444443333343221100000 000 11124444432 3
Q ss_pred CcEEEEeeC-CeEEEEEcCCCcEEEee
Q 046579 359 DSYLVLHLP-KKAVRYNLKDRTFKKLH 384 (416)
Q Consensus 359 ~~~i~l~~~-~~l~~ydl~~~~~~~v~ 384 (416)
++.|++.+. +.++.||.+++++..+.
T Consensus 268 ~g~lWigt~~~Gl~~~~~~~~~~~~~~ 294 (781)
T 3v9f_A 268 DNKLWIATELNGIMILDLQQNQFLLPE 294 (781)
T ss_dssp TSEEEEEESSSCEEEEETTCC------
T ss_pred CCCEEEEeCCCCeEEECCCCCeeeeee
Confidence 457888876 89999999998876654
No 78
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=45.31 E-value=1.5e+02 Score=25.72 Aligned_cols=107 Identities=19% Similarity=0.301 Sum_probs=54.6
Q ss_pred ceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCCeeeccCCCc
Q 046579 146 RNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGPWRLSGGSFT 225 (416)
Q Consensus 146 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~ 225 (416)
..++.+||.+++...+. .. ....++.+++. +.. ++...... .......+.+|+..++..........
T Consensus 169 ~~v~~~d~~~g~~~~~~--~~-------~~p~gl~~spd--g~~-lyv~~~~~-~~~~~~~i~~~~~~~~~l~~~~~~~~ 235 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA--DL-------DHPNGLAFSPD--EQT-LYVSQTPE-QGHGSVEITAFAWRDGALHDRRHFAS 235 (305)
T ss_dssp EEEEEECSSSCCCEEEE--EE-------SSEEEEEECTT--SSE-EEEEECCC----CCCEEEEEEEETTEEEEEEEEEC
T ss_pred CeEEEEcCCCCcEEEEe--cC-------CCCcceEEcCC--CCE-EEEEecCC-cCCCCCEEEEEEecCCCccCCeEEEE
Confidence 56889999888877654 11 11223556653 222 22222211 00001267777766544221110000
Q ss_pred cccccccCCcEEE--ccEEEEEeeCCcEEEEEcCCceEeecCCCC
Q 046579 226 APSVINFRGGVFW--NGAIHWVSTHGSSLYFDVDQEKLREMPMPP 268 (416)
Q Consensus 226 ~~~~~~~~~~v~~--~G~lyw~~~~~~il~fD~~~e~~~~i~~P~ 268 (416)
.. .....++.+ +|. .|++..+.|..||.+.+....+..|.
T Consensus 236 ~~--~~~pdgi~~d~~G~-lwv~~~~gv~~~~~~g~~~~~~~~~~ 277 (305)
T 3dr2_A 236 VP--DGLPDGFCVDRGGW-LWSSSGTGVCVFDSDGQLLGHIPTPG 277 (305)
T ss_dssp CS--SSCCCSEEECTTSC-EEECCSSEEEEECTTSCEEEEEECSS
T ss_pred CC--CCCCCeEEECCCCC-EEEecCCcEEEECCCCCEEEEEECCC
Confidence 00 011223443 577 56666667999999888888888775
No 79
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=44.18 E-value=1.6e+02 Score=25.54 Aligned_cols=66 Identities=15% Similarity=0.071 Sum_probs=39.8
Q ss_pred eCceEEeeecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEE
Q 046579 130 CNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEI 209 (416)
Q Consensus 130 ~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~v 209 (416)
.+|.|++... ....++.+||.+++...+..... ..++.+++. +.+ ++. ... .+.+
T Consensus 23 ~~~~l~~~d~----~~~~i~~~d~~~~~~~~~~~~~~---------~~~i~~~~d--G~l-~v~--~~~-------~l~~ 77 (297)
T 3g4e_A 23 VSNSLLFVDI----PAKKVCRWDSFTKQVQRVTMDAP---------VSSVALRQS--GGY-VAT--IGT-------KFCA 77 (297)
T ss_dssp TTTEEEEEET----TTTEEEEEETTTCCEEEEECSSC---------EEEEEEBTT--SSE-EEE--ETT-------EEEE
T ss_pred CCCEEEEEEC----CCCEEEEEECCCCcEEEEeCCCc---------eEEEEECCC--CCE-EEE--ECC-------eEEE
Confidence 3555655553 25679999999988765533221 123556664 343 222 221 7889
Q ss_pred EECCCCCeeec
Q 046579 210 YSSKTGPWRLS 220 (416)
Q Consensus 210 yss~t~~W~~~ 220 (416)
|+..+++++..
T Consensus 78 ~d~~~g~~~~~ 88 (297)
T 3g4e_A 78 LNWKEQSAVVL 88 (297)
T ss_dssp EETTTTEEEEE
T ss_pred EECCCCcEEEE
Confidence 99998888765
No 80
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=44.13 E-value=1.6e+02 Score=25.67 Aligned_cols=65 Identities=12% Similarity=0.023 Sum_probs=37.8
Q ss_pred ccEEEEEee-CCcEEEEEcCCceEeecCCCCCCCcccccceeEEEE-eCCeEEEEEEecCCcCeEEEEEEeCCCCCce
Q 046579 239 NGAIHWVST-HGSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGE-SRGHLHLIEIYGPCTALFNVYEMKTDYSGWF 314 (416)
Q Consensus 239 ~G~lyw~~~-~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~-~~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~ 314 (416)
+|.+||... .+.|..+|..++.-..+..+..|. .+.. .+|+|+++.... ....|+.++...++..
T Consensus 42 ~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~--------gia~~~dG~l~vad~~~---~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 42 DGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVS--------GLAFTSNGDLVATGWNA---DSIPVVSLVKSDGTVE 108 (306)
T ss_dssp TSCEEEEETTTTEEEEECTTCCEEEEEECSSEEE--------EEEECTTSCEEEEEECT---TSCEEEEEECTTSCEE
T ss_pred CCCEEEEeCCCCeEEEECCCCceEEEEeCCCCce--------eEEEcCCCcEEEEeccC---CcceEEEEcCCCCeEE
Confidence 688999873 468999998876444444432111 2333 378887765322 2346777764444443
No 81
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=43.28 E-value=1.6e+02 Score=25.35 Aligned_cols=137 Identities=9% Similarity=0.048 Sum_probs=68.5
Q ss_pred EEEEEECCCCCeeeccCCCccccccccCCcEEE--ccE-EEEEeeCCcEEEEEcCCceEee-cCCCCCCCcccccceeEE
Q 046579 206 QIEIYSSKTGPWRLSGGSFTAPSVINFRGGVFW--NGA-IHWVSTHGSSLYFDVDQEKLRE-MPMPPIPDEWEERRHQYF 281 (416)
Q Consensus 206 ~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~--~G~-lyw~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l 281 (416)
.+.+|+..++............ ..-..+.+ +|. ++-...++.|..+|+.+.+... +.... .....+
T Consensus 120 ~i~~~d~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~-------~~i~~~ 189 (337)
T 1gxr_A 120 TLSIWDLAAPTPRIKAELTSSA---PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-------DGASCI 189 (337)
T ss_dssp EEEEEECCCC--EEEEEEECSS---SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS-------SCEEEE
T ss_pred cEEEEECCCCCcceeeecccCC---CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeeccc-------CceEEE
Confidence 7899999888754331100000 00011111 443 3333445679999998765432 32211 111223
Q ss_pred EEe-CCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCc
Q 046579 282 GES-RGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDS 360 (416)
Q Consensus 282 ~~~-~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (416)
.-. +|++.++...+ ..+.+|.++.. .....+... ....-+++.. ++.
T Consensus 190 ~~~~~~~~l~~~~~d---g~i~~~d~~~~----~~~~~~~~~---------------------~~v~~~~~s~----~~~ 237 (337)
T 1gxr_A 190 DISNDGTKLWTGGLD---NTVRSWDLREG----RQLQQHDFT---------------------SQIFSLGYCP----TGE 237 (337)
T ss_dssp EECTTSSEEEEEETT---SEEEEEETTTT----EEEEEEECS---------------------SCEEEEEECT----TSS
T ss_pred EECCCCCEEEEEecC---CcEEEEECCCC----ceEeeecCC---------------------CceEEEEECC----CCC
Confidence 333 56655554433 57899977642 233332211 1223444543 355
Q ss_pred EEEE-eeCCeEEEEEcCCCcEEEee
Q 046579 361 YLVL-HLPKKAVRYNLKDRTFKKLH 384 (416)
Q Consensus 361 ~i~l-~~~~~l~~ydl~~~~~~~v~ 384 (416)
+++. ..++.+..||+++++...+.
T Consensus 238 ~l~~~~~~~~i~~~~~~~~~~~~~~ 262 (337)
T 1gxr_A 238 WLAVGMESSNVEVLHVNKPDKYQLH 262 (337)
T ss_dssp EEEEEETTSCEEEEETTSSCEEEEC
T ss_pred EEEEEcCCCcEEEEECCCCCeEEEc
Confidence 5555 45788999999988766543
No 82
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=42.71 E-value=9.4 Score=35.42 Aligned_cols=30 Identities=10% Similarity=-0.120 Sum_probs=20.5
Q ss_pred CcEEEccEEEEEeeCCcEEEEEcCC--ceEee
Q 046579 234 GGVFWNGAIHWVSTHGSSLYFDVDQ--EKLRE 263 (416)
Q Consensus 234 ~~v~~~G~lyw~~~~~~il~fD~~~--e~~~~ 263 (416)
.++..+|.+|....++.|.++|..+ ..|+.
T Consensus 4 sP~v~~~~v~~gs~dg~v~a~d~~tG~~~W~~ 35 (369)
T 2hz6_A 4 TVTLPETLLFVSTLDGSLHAVSKRTGSIKWTL 35 (369)
T ss_dssp ----CTTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCeeeCCEEEEEcCCCEEEEEECCCCCEEEEe
Confidence 4556788899888888999999866 44654
No 83
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=42.04 E-value=2.8e+02 Score=27.86 Aligned_cols=161 Identities=15% Similarity=0.092 Sum_probs=84.8
Q ss_pred EEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCC--C-eeeccCCCccccccccCCcEE-EccEEEEEeeCC----c
Q 046579 179 LAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTG--P-WRLSGGSFTAPSVINFRGGVF-WNGAIHWVSTHG----S 250 (416)
Q Consensus 179 l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~--~-W~~~~~~~~~~~~~~~~~~v~-~~G~lyw~~~~~----~ 250 (416)
..+.| .+.|-++....... ....+.+++..++ . |+.+....... ...+. -++.||+....+ .
T Consensus 273 ~~~Sp--DG~~l~~~~~~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~~~~-----~~~~~~dg~~l~~~s~~~~~~~~ 342 (741)
T 1yr2_A 273 ASVSS--DGRWVVITSSEGTD---PVNTVHVARVTNGKIGPVTALIPDLKAQ-----WDFVDGVGDQLWFVSGDGAPLKK 342 (741)
T ss_dssp EEECT--TSCEEEEEEECTTC---SCCEEEEEEEETTEECCCEEEECSSSSC-----EEEEEEETTEEEEEECTTCTTCE
T ss_pred EEECC--CCCEEEEEEEccCC---CcceEEEEECCCCCCcccEEecCCCCce-----EEEEeccCCEEEEEECCCCCCCE
Confidence 34444 34565554432211 1336777777766 6 77664322111 11223 344788887643 5
Q ss_pred EEEEEcCC--ceEeecCCCCCCCcccccceeEEEEeCCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEccccccccc
Q 046579 251 SLYFDVDQ--EKLREMPMPPIPDEWEERRHQYFGESRGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVF 328 (416)
Q Consensus 251 il~fD~~~--e~~~~i~~P~~~~~~~~~~~~~l~~~~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~ 328 (416)
|..+|+++ +.|..+- |..... ...+...+++|.+....+ ....||.++-+.+ +...+.+
T Consensus 343 l~~~d~~~~~~~~~~l~-~~~~~~-----l~~~~~~~~~lv~~~~~d---g~~~l~~~~~~g~---~~~~l~~------- 403 (741)
T 1yr2_A 343 IVRVDLSGSTPRFDTVV-PESKDN-----LESVGIAGNRLFASYIHD---AKSQVLAFDLDGK---PAGAVSL------- 403 (741)
T ss_dssp EEEEECSSSSCEEEEEE-CCCSSE-----EEEEEEEBTEEEEEEEET---TEEEEEEEETTSC---EEEECBC-------
T ss_pred EEEEeCCCCccccEEEe-cCCCCe-----EEEEEEECCEEEEEEEEC---CEEEEEEEeCCCC---ceeeccC-------
Confidence 99999987 5787652 432211 112334478887776544 4678888874222 3333432
Q ss_pred ccchhccCCCCCCceeeeEEEEeecCCCCCCc-EEEEe----eCCeEEEEEcCCCcEEEee
Q 046579 329 PEMIRTYLDPEDLHYYGYSILCVVREENDDDS-YLVLH----LPKKAVRYNLKDRTFKKLH 384 (416)
Q Consensus 329 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~l~----~~~~l~~ydl~~~~~~~v~ 384 (416)
|.. ..+..+++.. ++. +++.. .+..++.||+.+++.+.+.
T Consensus 404 ~~~------------~~v~~~~~s~----d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~ 448 (741)
T 1yr2_A 404 PGI------------GSASGLSGRP----GDRHAYLSFSSFTQPATVLALDPATAKTTPWE 448 (741)
T ss_dssp SSS------------CEEEEEECCB----TCSCEEEEEEETTEEEEEEEEETTTTEEEECS
T ss_pred CCC------------eEEEEeecCC----CCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 110 1122233322 233 44432 2469999999999876654
No 84
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=41.36 E-value=1.6e+02 Score=24.68 Aligned_cols=110 Identities=13% Similarity=0.082 Sum_probs=52.1
Q ss_pred EEeeeCceEEe-eecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCc
Q 046579 126 VLQSCNGLLLC-SSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGH 204 (416)
Q Consensus 126 ~~~s~~GLvl~-~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~ 204 (416)
+....+|-+.+ ... ....++++|+-++....++.... ....++.+|+. +. ++......
T Consensus 29 i~~~~~g~l~v~~~~----~~~~i~~~~~~~~~~~~~~~~~~-------~~p~~i~~~~~--g~--l~v~~~~~------ 87 (270)
T 1rwi_B 29 VAVDSAGNVYVTSEG----MYGRVVKLATGSTGTTVLPFNGL-------YQPQGLAVDGA--GT--VYVTDFNN------ 87 (270)
T ss_dssp EEECTTCCEEEEECS----SSCEEEEECC-----EECCCCSC-------CSCCCEEECTT--CC--EEEEETTT------
T ss_pred eEECCCCCEEEEccC----CCCcEEEecCCCcccceEeeCCc-------CCcceeEECCC--CC--EEEEcCCC------
Confidence 33345666655 432 24668899998877666543321 11223556663 33 22222211
Q ss_pred eEEEEEECCCCCeeeccCCCccccccccCCcEEE--ccEEEEEee-CCcEEEEEcCCceEe
Q 046579 205 YQIEIYSSKTGPWRLSGGSFTAPSVINFRGGVFW--NGAIHWVST-HGSSLYFDVDQEKLR 262 (416)
Q Consensus 205 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~-~~~il~fD~~~e~~~ 262 (416)
.+.+|+..++.-....... .....++.+ +|.+|+... .+.|..+|..+....
T Consensus 88 -~i~~~d~~~~~~~~~~~~~-----~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~ 142 (270)
T 1rwi_B 88 -RVVTLAAGSNNQTVLPFDG-----LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT 142 (270)
T ss_dssp -EEEEECTTCSCCEECCCCS-----CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE
T ss_pred -EEEEEeCCCceEeeeecCC-----cCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE
Confidence 6778887765443321110 011122333 577776653 357888887665433
No 85
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=41.05 E-value=2e+02 Score=25.77 Aligned_cols=144 Identities=15% Similarity=0.095 Sum_probs=67.2
Q ss_pred eCceEEeeecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEE
Q 046579 130 CNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEI 209 (416)
Q Consensus 130 ~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~v 209 (416)
.+|.++.... ...+.+||..+++....-.... .....+.+.+. +.+ ++...... .+.+
T Consensus 216 ~~~~~~~~~~-----~g~i~~~d~~~~~~~~~~~~~~-------~~i~~~~~~~~--~~~-l~~~~~d~-------~i~i 273 (425)
T 1r5m_A 216 DDDKFVIPGP-----KGAIFVYQITEKTPTGKLIGHH-------GPISVLEFNDT--NKL-LLSASDDG-------TLRI 273 (425)
T ss_dssp ETTEEEEECG-----GGCEEEEETTCSSCSEEECCCS-------SCEEEEEEETT--TTE-EEEEETTS-------CEEE
T ss_pred CCCEEEEEcC-----CCeEEEEEcCCCceeeeeccCC-------CceEEEEECCC--CCE-EEEEcCCC-------EEEE
Confidence 3555554442 4668999988875443211111 11223455553 333 22222222 6788
Q ss_pred EECCCCCeeeccCCCccccccccCCcEEEccEEEEEeeCCcEEEEEcCCceEee-cCCCCCCCcccccceeEEEEe-CCe
Q 046579 210 YSSKTGPWRLSGGSFTAPSVINFRGGVFWNGAIHWVSTHGSSLYFDVDQEKLRE-MPMPPIPDEWEERRHQYFGES-RGH 287 (416)
Q Consensus 210 yss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~-~G~ 287 (416)
|+..++.-...-...... ...-...-+|.+.-...++.|..+|+.+.+... +..... ....+.-. +|+
T Consensus 274 ~d~~~~~~~~~~~~~~~~---i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-------~i~~~~~s~~~~ 343 (425)
T 1r5m_A 274 WHGGNGNSQNCFYGHSQS---IVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGV-------PIFAGRISQDGQ 343 (425)
T ss_dssp ECSSSBSCSEEECCCSSC---EEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTTC-------CEEEEEECTTSS
T ss_pred EECCCCccceEecCCCcc---EEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCCc-------cEEEEEEcCCCC
Confidence 887765432211100000 000011114533334445688999998765432 222111 11123322 566
Q ss_pred EEEEEEecCCcCeEEEEEEeC
Q 046579 288 LHLIEIYGPCTALFNVYEMKT 308 (416)
Q Consensus 288 L~~v~~~~~~~~~l~iW~l~~ 308 (416)
+.++...+ ..+.||.++.
T Consensus 344 ~l~~~~~d---g~i~i~~~~~ 361 (425)
T 1r5m_A 344 KYAVAFMD---GQVNVYDLKK 361 (425)
T ss_dssp EEEEEETT---SCEEEEECHH
T ss_pred EEEEEECC---CeEEEEECCC
Confidence 65554433 5799998875
No 86
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=40.72 E-value=3e+02 Score=27.76 Aligned_cols=195 Identities=12% Similarity=0.091 Sum_probs=98.5
Q ss_pred EEeeeCceEEeeecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCce
Q 046579 126 VLQSCNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHY 205 (416)
Q Consensus 126 ~~~s~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~ 205 (416)
+....+|.|.+... ..++.+|+.|+++.. |.... .. .... +. +. .+. +.+....
T Consensus 68 i~~d~~g~lWigT~------~Gl~~yd~~~~~f~~-~~~~~-~~---~i~~--i~-~~--~g~---lWigt~~------- 121 (758)
T 3ott_A 68 GVIIDNTYLYMGTD------NGILVYNYRADRYEQ-PETDF-PT---DVRT--MA-LQ--GDT---LWLGALN------- 121 (758)
T ss_dssp EEEETTTEEEEEET------TEEEEEETTTTEECC-CSCCC-CS---CEEE--EE-EE--TTE---EEEEETT-------
T ss_pred EEEcCCCcEEEEeC------CCeEEEeCCCCEEEC-cccCC-Cc---eEEE--EE-ec--CCc---EEEEcCC-------
Confidence 44456777777652 358899999987654 21111 00 0111 21 11 122 2222221
Q ss_pred EEEEEECCCCCeeeccCC-CccccccccCCcEEE--ccEEEEEeeCCcEEEEEcCCceEeecCCCCCCCcccccceeEEE
Q 046579 206 QIEIYSSKTGPWRLSGGS-FTAPSVINFRGGVFW--NGAIHWVSTHGSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFG 282 (416)
Q Consensus 206 ~~~vyss~t~~W~~~~~~-~~~~~~~~~~~~v~~--~G~lyw~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~ 282 (416)
.+..|+..++..+..... ...+ ...-..++. +|.+ |+.....+..||..+.++..+..|.... ........+.
T Consensus 122 Gl~~~~~~~~~~~~~~~~~~~l~--~~~i~~i~~d~~g~l-Wigt~~Gl~~~~~~~~~~~~~~~~~~~~-~~~~~i~~i~ 197 (758)
T 3ott_A 122 GLYTYQLQSRKLTSFDTRRNGLP--NNTIYSIIRTKDNQI-YVGTYNGLCRYIPSNGKFEGIPLPVHSS-QSNLFVNSLL 197 (758)
T ss_dssp EEEEEETTTCCEEEECHHHHCCS--CSCEEEEEECTTCCE-EEEETTEEEEEETTTTEEEEECCCCCTT-CSSCCEEEEE
T ss_pred cceeEeCCCCeEEEeccCCCCcC--CCeEEEEEEcCCCCE-EEEeCCCHhhCccCCCceEEecCCCccc-cccceeEEEE
Confidence 577888888777654110 0000 001112333 4554 5555567889999999998776653211 1111122344
Q ss_pred Ee-CC-eEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCc
Q 046579 283 ES-RG-HLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDS 360 (416)
Q Consensus 283 ~~-~G-~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (416)
+. +| .|.+.. .. -|..++...+.+.....+ + ...+.++... ..+
T Consensus 198 ~d~~~~~lWigt-~~------Gl~~~~~~~~~~~~~~~l---------~---------------~~~i~~i~~d---~~g 243 (758)
T 3ott_A 198 EDTTRQCVWIGT-EG------YLFQYFPSTGQIKQTEAF---------H---------------NNSIKSLALD---GNG 243 (758)
T ss_dssp EETTTTEEEEEE-EE------EEEEEETTTTEEEEEEEE---------E---------------EEEEEEEEEC---TTC
T ss_pred EECCCCEEEEEE-CC------CCeEEcCCCCeEEeccCC---------C---------------CCeEEEEEEc---CCC
Confidence 43 34 356543 11 255555433434322111 0 1123444432 245
Q ss_pred EEEEeeCCeEEEEEcCCCcEEEee
Q 046579 361 YLVLHLPKKAVRYNLKDRTFKKLH 384 (416)
Q Consensus 361 ~i~l~~~~~l~~ydl~~~~~~~v~ 384 (416)
.|++.++..++.||.++++++.+.
T Consensus 244 ~lWigT~~Gl~~~~~~~~~~~~~~ 267 (758)
T 3ott_A 244 DLLAGTDNGLYVYHNDTTPLQHII 267 (758)
T ss_dssp CEEEEETTEEEEECCTTSCCEEEC
T ss_pred CEEEEeCCceeEEecCCCcEEEEE
Confidence 688888889999999998887664
No 87
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=40.42 E-value=2.2e+02 Score=26.03 Aligned_cols=118 Identities=16% Similarity=0.102 Sum_probs=61.4
Q ss_pred ccEEEEEeeCCcEEEEEcCCceEeec---CCCCC---CCcccccceeEEEE--eCCeEEEEEEecCCc----CeEEEEEE
Q 046579 239 NGAIHWVSTHGSSLYFDVDQEKLREM---PMPPI---PDEWEERRHQYFGE--SRGHLHLIEIYGPCT----ALFNVYEM 306 (416)
Q Consensus 239 ~G~lyw~~~~~~il~fD~~~e~~~~i---~~P~~---~~~~~~~~~~~l~~--~~G~L~~v~~~~~~~----~~l~iW~l 306 (416)
+|.+||....+.+.++|+.+.+-..+ ++... ...+.......++. .+++|++........ ..=.||+.
T Consensus 224 ~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VI 303 (373)
T 2mad_H 224 SGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV 303 (373)
T ss_pred CCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEE
Confidence 56778888777899999976532221 11100 00111101111222 234555543321100 12358888
Q ss_pred eCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCc-EEEEe--eCCeEEEEEcCCCcEEEe
Q 046579 307 KTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDS-YLVLH--LPKKAVRYNLKDRTFKKL 383 (416)
Q Consensus 307 ~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~l~--~~~~l~~ydl~~~~~~~v 383 (416)
+- .....+.+|.+..- | .-+++.. ++. .+|.. .++.+.+||.++++..+.
T Consensus 304 D~--~t~~vv~~i~~g~~----p-----------------~~i~~s~----Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 304 TG--LVGQTSSQISLGHD----V-----------------DAISVAQ----DGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred EC--CCCEEEEEEECCCC----c-----------------CeEEECC----CCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 85 34666677754320 1 2344443 466 66664 478999999999887654
No 88
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=40.22 E-value=2.4e+02 Score=26.99 Aligned_cols=129 Identities=9% Similarity=0.121 Sum_probs=66.0
Q ss_pred CCcEEEEEcCCceE-eecCCCCCCCcccccceeEEEEeCCeEEEEEEe---cCCcCeEEEEEEeCCCCCceEEEEEcccc
Q 046579 248 HGSSLYFDVDQEKL-REMPMPPIPDEWEERRHQYFGESRGHLHLIEIY---GPCTALFNVYEMKTDYSGWFVKYRVDLGG 323 (416)
Q Consensus 248 ~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~l~~~~G~L~~v~~~---~~~~~~l~iW~l~~~~~~W~~~~~i~~~~ 323 (416)
.+.|..+|+.+.+- ..|+++.. +........+..-+|+..++... ......+.+|..++ +.|..+..|++..
T Consensus 227 ~d~V~v~D~~~~k~~~tI~vg~~--g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~--g~~~~~~vIdi~~ 302 (462)
T 2ece_A 227 GNRIHFWDLRKRKRIHSLTLGEE--NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED--GKWNAEKVIEIPA 302 (462)
T ss_dssp CCEEEEEETTTTEEEEEEESCTT--EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET--TEEEEEEEEEECC
T ss_pred CCEEEEEECCCCcEeeEEecCCC--CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC--CceeEEEEEeCCC
Confidence 45789999987543 44665421 11100111111236776666543 00124677777764 7899999987654
Q ss_pred c--ccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEe--eCCeEEEEEcC-CCcEEEeeecCC
Q 046579 324 V--TYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLH--LPKKAVRYNLK-DRTFKKLHDVAP 388 (416)
Q Consensus 324 l--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~--~~~~l~~ydl~-~~~~~~v~~~~~ 388 (416)
. ...+|.+...| ... .....-+.++. ++.++|+. ..+.+.+||.. .++.+.+..+..
T Consensus 303 ~~v~~~lp~~~~~f-~~~---~~~pa~I~lS~----DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~t 364 (462)
T 2ece_A 303 EPLEGNLPEILKPF-KAV---PPLVTDIDISL----DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKL 364 (462)
T ss_dssp EECCSSCCGGGGGG-TEE---CCCCCCEEECT----TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEEC
T ss_pred cccccccccccccc-ccC---CCceeEEEECC----CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEe
Confidence 2 11122221000 000 00112233433 68899995 46799999985 445565555544
No 89
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=39.99 E-value=2.7e+02 Score=26.97 Aligned_cols=192 Identities=12% Similarity=0.078 Sum_probs=92.2
Q ss_pred CceEEEEccCCcceE---ecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCCeeec-
Q 046579 145 RRNYYVYNPTNKQYT---ILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGPWRLS- 220 (416)
Q Consensus 145 ~~~~~V~NP~T~~~~---~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~- 220 (416)
...+.++|..+.+.. .++... ....++++|. +.|-++.-.... .+.+++..+++=...
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~~~~---------~~~~~~~spd--g~~l~va~~~~~-------~v~v~D~~tg~l~~~i 362 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIGAAP---------FLHDGGWDSS--HRYFMTAANNSN-------KVAVIDSKDRRLSALV 362 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEECCS---------SCCCEEECTT--SCEEEEEEGGGT-------EEEEEETTTTEEEEEE
T ss_pred CCeEEEEEecCCCcceeEEeccCc---------CccCceECCC--CCEEEEEecCCC-------eEEEEECCCCeEEEee
Confidence 456777887765432 222111 1123567774 566554432222 788899988853321
Q ss_pred cCCCccccccccCCcE-EE--c-cEEEEEee--CCcEEEEEcCCce-----Eee---cCCCCCCCcccccceeEEEE-eC
Q 046579 221 GGSFTAPSVINFRGGV-FW--N-GAIHWVST--HGSSLYFDVDQEK-----LRE---MPMPPIPDEWEERRHQYFGE-SR 285 (416)
Q Consensus 221 ~~~~~~~~~~~~~~~v-~~--~-G~lyw~~~--~~~il~fD~~~e~-----~~~---i~~P~~~~~~~~~~~~~l~~-~~ 285 (416)
.... .+ ....++ +. + |.+|.... ++.|..+|+.++. |.. ++.+... ...+.. -+
T Consensus 363 ~~g~-~p---h~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~-------~~~v~~~pd 431 (543)
T 1nir_A 363 DVGK-TP---HPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG-------SLFIKTHPK 431 (543)
T ss_dssp ECSS-SB---CCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC-------CCCEECCTT
T ss_pred ccCC-CC---CCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCC-------ceEEEcCCC
Confidence 1110 01 111222 22 2 55554433 3578889998731 433 3332210 001222 25
Q ss_pred CeEEEEEEe-cCC---cCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcE
Q 046579 286 GHLHLIEIY-GPC---TALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSY 361 (416)
Q Consensus 286 G~L~~v~~~-~~~---~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (416)
|+..++... ..+ ...+.||-.++.+. ....+++....+ +++-- ....-+.|. .+|..
T Consensus 432 g~~l~v~~~~~~~~~~~~~v~v~d~~~~~~---~~~~~~v~~~~~-~~~~~-----------~~~~~~~~~----~~g~~ 492 (543)
T 1nir_A 432 SSHLYVDTTFNPDARISQSVAVFDLKNLDA---KYQVLPIAEWAD-LGEGA-----------KRVVQPEYN----KRGDE 492 (543)
T ss_dssp CCEEEECCTTCSSHHHHTCEEEEETTCTTS---CCEEECHHHHHC-CCSSC-----------CEEEEEEEC----SSSSE
T ss_pred CCcEEEecCCCCCcccCceEEEEECCCCCC---CeEEeechhhcc-cCCCC-----------CceEeccCC----CCCCE
Confidence 665555431 111 35788888875431 113333321110 01100 122223443 35777
Q ss_pred EEEe------eCCeEEEEEcCCCcEEEee
Q 046579 362 LVLH------LPKKAVRYNLKDRTFKKLH 384 (416)
Q Consensus 362 i~l~------~~~~l~~ydl~~~~~~~v~ 384 (416)
|++. .++.+.+||.+|++..+.-
T Consensus 493 ~~~s~~~~~~~~~~i~v~D~~t~~~~~~i 521 (543)
T 1nir_A 493 VWFSVWNGKNDSSALVVVDDKTLKLKAVV 521 (543)
T ss_dssp EEEEEECCTTSCCEEEEEETTTTEEEEEE
T ss_pred EEEEeecCCCCCCeEEEEECCCceEEEee
Confidence 7764 2589999999999877654
No 90
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=38.46 E-value=2.1e+02 Score=25.39 Aligned_cols=25 Identities=4% Similarity=0.134 Sum_probs=18.5
Q ss_pred CcEEEEeeCCeEEEEEcCCCcEEEe
Q 046579 359 DSYLVLHLPKKAVRYNLKDRTFKKL 383 (416)
Q Consensus 359 ~~~i~l~~~~~l~~ydl~~~~~~~v 383 (416)
..+++...++.+..||+.+++....
T Consensus 305 ~~~~~~~~~~~i~v~d~~~~~~~~~ 329 (408)
T 4a11_B 305 SEFVFVPYGSTIAVYTVYSGEQITM 329 (408)
T ss_dssp SCEEEEEETTEEEEEETTTCCEEEE
T ss_pred ceEEEEecCCEEEEEECcCCcceee
Confidence 5566667788999999988775443
No 91
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=38.40 E-value=2e+02 Score=25.14 Aligned_cols=133 Identities=18% Similarity=0.214 Sum_probs=65.9
Q ss_pred ceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCC---CeeeccC
Q 046579 146 RNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTG---PWRLSGG 222 (416)
Q Consensus 146 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~---~W~~~~~ 222 (416)
..++++||.+++...+.... ....++.+++. +.+ ++..... ...+.+|+..+. ..+....
T Consensus 165 g~v~~~d~~~~~~~~~~~~~--------~~p~gia~~~d--g~~-lyv~d~~------~~~I~~~~~~~~~~~~~~~~~~ 227 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKEL--------HVPGGAEVSAD--SSF-VLVAEFL------SHQIVKYWLEGPKKGTAEVLVK 227 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEE--------SCCCEEEECTT--SSE-EEEEEGG------GTEEEEEESSSTTTTCEEEEEE
T ss_pred ceEEEEeCCCCEEEEeccCC--------ccCcceEECCC--CCE-EEEEeCC------CCeEEEEECCCCcCCccceEEe
Confidence 56889999888765442110 11123555553 232 2222121 126788887653 3332211
Q ss_pred CCccccccccCCcEEE--ccEEEEEeeC-----------CcEEEEEcCCceEeecCCCCCCCcccccceeEEEEeCCeEE
Q 046579 223 SFTAPSVINFRGGVFW--NGAIHWVSTH-----------GSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGESRGHLH 289 (416)
Q Consensus 223 ~~~~~~~~~~~~~v~~--~G~lyw~~~~-----------~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~~G~L~ 289 (416)
.. . ..++.+ +|.+|.-... ..|..||...+....+..|.... .. ....+...+|+|+
T Consensus 228 ---~~---g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~-~~--~~~~~~~~~g~L~ 297 (322)
T 2fp8_A 228 ---IP---N-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFA-GE--HFEQIQEHDGLLY 297 (322)
T ss_dssp ---CS---S-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTT-TS--CCCEEEEETTEEE
T ss_pred ---CC---C-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCc-cc--cceEEEEeCCEEE
Confidence 10 0 223333 4665443322 35899999888777777764210 11 1112445688888
Q ss_pred EEEEecCCcCeEEEEEEeC
Q 046579 290 LIEIYGPCTALFNVYEMKT 308 (416)
Q Consensus 290 ~v~~~~~~~~~l~iW~l~~ 308 (416)
+..... ..+.++.++.
T Consensus 298 v~~~~~---~~i~~~~~~~ 313 (322)
T 2fp8_A 298 IGTLFH---GSVGILVYDK 313 (322)
T ss_dssp EECSSC---SEEEEEEC--
T ss_pred EeecCC---CceEEEeccc
Confidence 874322 4566665553
No 92
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=38.13 E-value=3e+02 Score=26.95 Aligned_cols=213 Identities=7% Similarity=-0.033 Sum_probs=0.0
Q ss_pred eeCceEEeeecCCC------CCCceEEEEccCC------cceEecC-CCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEE
Q 046579 129 SCNGLLLCSSSRAY------QPRRNYYVYNPTN------KQYTILP-RLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVR 195 (416)
Q Consensus 129 s~~GLvl~~~~~~~------~~~~~~~V~NP~T------~~~~~LP-~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~ 195 (416)
|-+|-.++...... .....++++|..+ ++...|. .... ......+.| .+.+-++.-.
T Consensus 138 spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~~~~Sp--DG~~la~~~~ 207 (662)
T 3azo_A 138 LPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHR--------FVTGPRLSP--DGRQAVWLAW 207 (662)
T ss_dssp ETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSS--------EECCCEECT--TSSEEEEEEE
T ss_pred CCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCC--------cccCceECC--CCCEEEEEEC
Q ss_pred ecCCCCCCceEEEEEECC-CCCeeeccCCCccccccccCCcEEEccEEEEEeeCC---cEEEEEcCCceEeecCCCCCCC
Q 046579 196 NCDSLRDGHYQIEIYSSK-TGPWRLSGGSFTAPSVINFRGGVFWNGAIHWVSTHG---SSLYFDVDQEKLREMPMPPIPD 271 (416)
Q Consensus 196 ~~~~~~~~~~~~~vyss~-t~~W~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~---~il~fD~~~e~~~~i~~P~~~~ 271 (416)
......-....+.+++.. ++.+.....-..............-+|.+|+....+ .|..+|+.+.++..+..-....
T Consensus 208 ~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~ 287 (662)
T 3azo_A 208 DHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEF 287 (662)
T ss_dssp CTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBS
T ss_pred CCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccc
Q ss_pred cccccc--eeEEEEe-CCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEE
Q 046579 272 EWEERR--HQYFGES-RGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSI 348 (416)
Q Consensus 272 ~~~~~~--~~~l~~~-~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~ 348 (416)
...... ...+... +|++.+.... + ...||.++...+. ..++.... ..+..
T Consensus 288 ~~p~w~~~~~~~~~~~~~~~~~~~~~-~---~~~l~~~d~~~~~---~~~l~~~~--------------------~~~~~ 340 (662)
T 3azo_A 288 AGPLWTPGMRWFAPLANGLIAVVHGK-G---AAVLGILDPESGE---LVDAAGPW--------------------TEWAA 340 (662)
T ss_dssp SCCCCSTTCCSEEECTTSCEEEEEBS-S---SCEEEEEETTTTE---EEECCSSC--------------------CEEEE
T ss_pred cCccccccCceEeEeCCCEEEEEEEc-C---ccEEEEEECCCCc---EEEecCCC--------------------CeEEE
Q ss_pred E-EeecCCCCCCcEEEEeeCC----eEEEEEcCCCcEEEe
Q 046579 349 L-CVVREENDDDSYLVLHLPK----KAVRYNLKDRTFKKL 383 (416)
Q Consensus 349 ~-~~~~~~~~~~~~i~l~~~~----~l~~ydl~~~~~~~v 383 (416)
+ ... .+.+++..... .++.+|+++++.+.+
T Consensus 341 ~~s~~-----~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 341 TLTVS-----GTRAVGVAASPRTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp EEEEE-----TTEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred EEecC-----CCEEEEEEcCCCCCCEEEEEECCCCceEEe
No 93
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=37.89 E-value=3.1e+02 Score=27.14 Aligned_cols=101 Identities=12% Similarity=0.109 Sum_probs=57.2
Q ss_pred eeCCcEEEEEcCCceEeecCCCCCCCcccccceeEEEEe-CCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEccccc
Q 046579 246 STHGSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGES-RGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGV 324 (416)
Q Consensus 246 ~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l 324 (416)
..++.|..+|+.+.+....-. . + ......+.-. +|++.+....+ ..+.||-+... .+..++...
T Consensus 538 s~d~~v~vwd~~~~~~~~~~~-~--h---~~~v~~v~~spdg~~l~sg~~D---g~i~iwd~~~~----~~~~~~~~~-- 602 (694)
T 3dm0_A 538 SWDKTVKVWNLSNCKLRSTLA-G--H---TGYVSTVAVSPDGSLCASGGKD---GVVLLWDLAEG----KKLYSLEAN-- 602 (694)
T ss_dssp ETTSCEEEEETTTCCEEEEEC-C--C---SSCEEEEEECTTSSEEEEEETT---SBCEEEETTTT----EEEECCBCS--
T ss_pred eCCCeEEEEECCCCcEEEEEc-C--C---CCCEEEEEEeCCCCEEEEEeCC---CeEEEEECCCC----ceEEEecCC--
Confidence 345678889998765543211 1 1 1112223333 67766654433 57999988743 222222110
Q ss_pred ccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEeeCCeEEEEEcCCCcEEEee
Q 046579 325 TYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLHLPKKAVRYNLKDRTFKKLH 384 (416)
Q Consensus 325 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~l~~ydl~~~~~~~v~ 384 (416)
..+..+++.. ++.++....++.+.+||+++++.....
T Consensus 603 -------------------~~v~~~~~sp----~~~~l~~~~~~~i~iwd~~~~~~~~~~ 639 (694)
T 3dm0_A 603 -------------------SVIHALCFSP----NRYWLCAATEHGIKIWDLESKSIVEDL 639 (694)
T ss_dssp -------------------SCEEEEEECS----SSSEEEEEETTEEEEEETTTTEEEEEE
T ss_pred -------------------CcEEEEEEcC----CCcEEEEEcCCCEEEEECCCCCChhhh
Confidence 2234566654 456677777889999999998865543
No 94
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=37.34 E-value=2.3e+02 Score=25.36 Aligned_cols=190 Identities=11% Similarity=0.017 Sum_probs=85.4
Q ss_pred eeCceEEeeecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEE
Q 046579 129 SCNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIE 208 (416)
Q Consensus 129 s~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~ 208 (416)
+.+|-.++... ....+.|||..+++....-.... .....+.+.+. +...++...... .+.
T Consensus 148 spdg~~l~sgs----~dg~v~iwd~~~~~~~~~~~~h~-------~~v~~v~~s~~--~~~~~~s~~~dg-------~v~ 207 (357)
T 4g56_B 148 FSDGTQAVSGG----KDFSVKVWDLSQKAVLKSYNAHS-------SEVNCVAACPG--KDTIFLSCGEDG-------RIL 207 (357)
T ss_dssp CSSSSEEEEEE----TTSCEEEEETTTTEEEEEECCCS-------SCEEEEEECTT--CSSCEEEEETTS-------CEE
T ss_pred CCCCCEEEEEe----CCCeEEEEECCCCcEEEEEcCCC-------CCEEEEEEccC--CCceeeeeccCC-------ceE
Confidence 44665555443 35678999999988654322111 11223444443 233333333222 678
Q ss_pred EEECCCCCeeeccCCCccccccccCCcEEE---ccEEEEE-eeCCcEEEEEcCCceE-eecCCCCCCCcccccceeEEEE
Q 046579 209 IYSSKTGPWRLSGGSFTAPSVINFRGGVFW---NGAIHWV-STHGSSLYFDVDQEKL-REMPMPPIPDEWEERRHQYFGE 283 (416)
Q Consensus 209 vyss~t~~W~~~~~~~~~~~~~~~~~~v~~---~G~lyw~-~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~l~~ 283 (416)
+|+.++++-.......... .....+.+ ++.+... ..++.|..+|+.+.+. ..+.... .....+.-
T Consensus 208 ~wd~~~~~~~~~~~~~~~~---~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~-------~~v~~l~~ 277 (357)
T 4g56_B 208 LWDTRKPKPATRIDFCASD---TIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHS-------QNITGLAY 277 (357)
T ss_dssp ECCTTSSSCBCBCCCTTCC---SCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCS-------SCEEEEEE
T ss_pred EEECCCCceeeeeeecccc---ccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccc-------eeEEEEEE
Confidence 8888766433211000000 00112222 2333222 2345788889876542 2222211 11122333
Q ss_pred e-CCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEE
Q 046579 284 S-RGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYL 362 (416)
Q Consensus 284 ~-~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 362 (416)
. +|.-+++.... ...+.||-++.. .....+.. . ..+.-+++.+. ++.+|
T Consensus 278 sp~~~~~lasgs~--D~~i~iwd~~~~----~~~~~~~H-------~--------------~~V~~vafsP~---d~~~l 327 (357)
T 4g56_B 278 SYHSSPFLASISE--DCTVAVLDADFS----EVFRDLSH-------R--------------DFVTGVAWSPL---DHSKF 327 (357)
T ss_dssp CSSSSCCEEEEET--TSCEEEECTTSC----EEEEECCC-------S--------------SCEEEEEECSS---STTEE
T ss_pred cCCCCCEEEEEeC--CCEEEEEECCCC----cEeEECCC-------C--------------CCEEEEEEeCC---CCCEE
Confidence 3 44323333322 257999965531 22222110 0 22344566432 34444
Q ss_pred EE-eeCCeEEEEEcCCC
Q 046579 363 VL-HLPKKAVRYNLKDR 378 (416)
Q Consensus 363 ~l-~~~~~l~~ydl~~~ 378 (416)
.- ..++.+..||+.+.
T Consensus 328 ~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 328 TTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEEETTSCEEEEECC--
T ss_pred EEEcCCCeEEEEECCCC
Confidence 44 56889999999754
No 95
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=36.65 E-value=1.6e+02 Score=26.89 Aligned_cols=30 Identities=7% Similarity=0.021 Sum_probs=24.3
Q ss_pred CcEEEE-eeCCeEEEEEcCCCcEEEeeecCC
Q 046579 359 DSYLVL-HLPKKAVRYNLKDRTFKKLHDVAP 388 (416)
Q Consensus 359 ~~~i~l-~~~~~l~~ydl~~~~~~~v~~~~~ 388 (416)
++.||. ..++.+++.|++|++..+......
T Consensus 111 ~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~ 141 (339)
T 2be1_A 111 DEKVYTGSMRTIMYTINMLNGEIISAFGPGS 141 (339)
T ss_dssp CEEEEECEEEEEEEEEETTTCCEEEEESTTC
T ss_pred CCEEEEEecCCEEEEEECCCCcEEEEEecCC
Confidence 456776 567899999999999999987643
No 96
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=36.32 E-value=2.1e+02 Score=24.73 Aligned_cols=117 Identities=8% Similarity=-0.081 Sum_probs=57.8
Q ss_pred EEEEeeCCcEEEEEcCC-ce--EeecCCCCCCCcccccceeEEEEe--CCeEEEEEEecCCcCeEEEEEEeCC--CCCce
Q 046579 242 IHWVSTHGSSLYFDVDQ-EK--LREMPMPPIPDEWEERRHQYFGES--RGHLHLIEIYGPCTALFNVYEMKTD--YSGWF 314 (416)
Q Consensus 242 lyw~~~~~~il~fD~~~-e~--~~~i~~P~~~~~~~~~~~~~l~~~--~G~L~~v~~~~~~~~~l~iW~l~~~--~~~W~ 314 (416)
+.-...++.|..+|+.+ .. ......+.. .....+.-. +|++.++...+ ..+.||.++.. .....
T Consensus 163 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~------~~i~~i~~~~~~~~~l~~~~~d---g~i~i~~~~~~~~~~~~~ 233 (342)
T 1yfq_A 163 LIVGMNNSQVQWFRLPLCEDDNGTIEESGLK------YQIRDVALLPKEQEGYACSSID---GRVAVEFFDDQGDDYNSS 233 (342)
T ss_dssp EEEEESTTEEEEEESSCCTTCCCEEEECSCS------SCEEEEEECSGGGCEEEEEETT---SEEEEEECCTTCCSTTCT
T ss_pred EEEEeCCCeEEEEECCccccccceeeecCCC------CceeEEEECCCCCCEEEEEecC---CcEEEEEEcCCCcccccc
Confidence 44444556889999987 32 222222211 011223333 46666655433 58999999864 11122
Q ss_pred EEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE-eeCCeEEEEEcCCCcEEE
Q 046579 315 VKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL-HLPKKAVRYNLKDRTFKK 382 (416)
Q Consensus 315 ~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-~~~~~l~~ydl~~~~~~~ 382 (416)
....+....... .. ......+.-+++.. ++.+|+. ..++.+.+||+++++...
T Consensus 234 ~~~~~~~~~~~~--~~---------~~~~~~i~~~~~s~----~~~~l~~~~~dg~i~vwd~~~~~~~~ 287 (342)
T 1yfq_A 234 KRFAFRCHRLNL--KD---------TNLAYPVNSIEFSP----RHKFLYTAGSDGIISCWNLQTRKKIK 287 (342)
T ss_dssp TCEEEECCCCCT--TC---------CSSCCCEEEEEECT----TTCCEEEEETTSCEEEEETTTTEEEE
T ss_pred cceeeecccccc--cc---------cccceeEEEEEEcC----CCCEEEEecCCceEEEEcCccHhHhh
Confidence 222222111000 00 00002344555543 3555555 457899999999887544
No 97
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=35.74 E-value=2.5e+02 Score=25.34 Aligned_cols=195 Identities=12% Similarity=0.049 Sum_probs=93.6
Q ss_pred CceEEEEccCCcceEecC-CC-CcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCCeeecc-
Q 046579 145 RRNYYVYNPTNKQYTILP-RL-HVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGPWRLSG- 221 (416)
Q Consensus 145 ~~~~~V~NP~T~~~~~LP-~~-~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~- 221 (416)
++.+.|||..+++...-. .+ ....++. .....+.+.|. +...++...... .+.+|+..++.....-
T Consensus 103 dg~v~vw~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~p~--~~~~l~s~~~dg-------~i~iwd~~~~~~~~~~~ 171 (402)
T 2aq5_A 103 DCTVMVWEIPDGGLVLPLREPVITLEGHT--KRVGIVAWHPT--AQNVLLSAGCDN-------VILVWDVGTGAAVLTLG 171 (402)
T ss_dssp TSEEEEEECCTTCCSSCBCSCSEEEECCS--SCEEEEEECSS--BTTEEEEEETTS-------CEEEEETTTTEEEEEEC
T ss_pred CCeEEEEEccCCCCccccCCceEEecCCC--CeEEEEEECcC--CCCEEEEEcCCC-------EEEEEECCCCCccEEEe
Confidence 567899998887432100 00 0000111 12234555553 223344333322 6889998887554221
Q ss_pred -CCCccccccccCCcEEE--ccE-EEEEeeCCcEEEEEcCCceEee-cCCCCCCCcccccceeEEE-EeCCeEEEEEEec
Q 046579 222 -GSFTAPSVINFRGGVFW--NGA-IHWVSTHGSSLYFDVDQEKLRE-MPMPPIPDEWEERRHQYFG-ESRGHLHLIEIYG 295 (416)
Q Consensus 222 -~~~~~~~~~~~~~~v~~--~G~-lyw~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~-~~~G~L~~v~~~~ 295 (416)
..... .-..+.+ +|. +.-...++.|..+|+.+.+... +..... .. ....+. ..+|++.++....
T Consensus 172 ~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~l~~g~~~ 241 (402)
T 2aq5_A 172 PDVHPD-----TIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHE-GT----RPVHAVFVSEGKILTTGFSR 241 (402)
T ss_dssp TTTCCS-----CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSC-SS----SCCEEEECSTTEEEEEEECT
T ss_pred cCCCCC-----ceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCC-CC----cceEEEEcCCCcEEEEeccC
Confidence 11110 0111112 443 3333345678899998765433 211111 00 011122 2377766665322
Q ss_pred CCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE-e-eCCeEEEE
Q 046579 296 PCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL-H-LPKKAVRY 373 (416)
Q Consensus 296 ~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-~-~~~~l~~y 373 (416)
.....+.||.+...... .....++.. ....-+++.. ++..+++ . .++.+.+|
T Consensus 242 ~~d~~i~iwd~~~~~~~-~~~~~~~~~---------------------~~v~~~~~s~----~~~~l~~~g~~dg~i~i~ 295 (402)
T 2aq5_A 242 MSERQVALWDTKHLEEP-LSLQELDTS---------------------SGVLLPFFDP----DTNIVYLCGKGDSSIRYF 295 (402)
T ss_dssp TCCEEEEEEETTBCSSC-SEEEECCCC---------------------SSCEEEEEET----TTTEEEEEETTCSCEEEE
T ss_pred CCCceEEEEcCccccCC-ceEEeccCC---------------------CceeEEEEcC----CCCEEEEEEcCCCeEEEE
Confidence 23368999988753221 111111100 1223445544 4566665 3 47899999
Q ss_pred EcCCCc--EEEeeec
Q 046579 374 NLKDRT--FKKLHDV 386 (416)
Q Consensus 374 dl~~~~--~~~v~~~ 386 (416)
|+++++ +..+...
T Consensus 296 d~~~~~~~~~~l~~~ 310 (402)
T 2aq5_A 296 EITSEAPFLHYLSMF 310 (402)
T ss_dssp EECSSTTCEEEEEEE
T ss_pred EecCCCcceEeeccc
Confidence 999988 6666654
No 98
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=35.49 E-value=1.7e+02 Score=25.15 Aligned_cols=70 Identities=10% Similarity=0.043 Sum_probs=0.0
Q ss_pred CCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE
Q 046579 285 RGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL 364 (416)
Q Consensus 285 ~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l 364 (416)
+|++.+....+ ..+.||.++.....+.....+.-.. ..+.-+++.... ++.+|+.
T Consensus 22 ~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~--------------------~~v~~~~~~~~~--d~~~l~s 76 (351)
T 3f3f_A 22 YGRHVATCSSD---QHIKVFKLDKDTSNWELSDSWRAHD--------------------SSIVAIDWASPE--YGRIIAS 76 (351)
T ss_dssp SSSEEEEEETT---SEEEEEEECSSSCCEEEEEEEECCS--------------------SCEEEEEECCGG--GCSEEEE
T ss_pred CCCEEEEeeCC---CeEEEEECCCCCCcceecceeccCC--------------------CcEEEEEEcCCC--CCCEEEE
Q ss_pred -eeCCeEEEEEcCCCc
Q 046579 365 -HLPKKAVRYNLKDRT 379 (416)
Q Consensus 365 -~~~~~l~~ydl~~~~ 379 (416)
..++.+..||+++++
T Consensus 77 ~~~dg~v~vwd~~~~~ 92 (351)
T 3f3f_A 77 ASYDKTVKLWEEDPDQ 92 (351)
T ss_dssp EETTSCEEEEEECTTS
T ss_pred EcCCCeEEEEecCCCc
No 99
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=34.53 E-value=2.1e+02 Score=24.20 Aligned_cols=151 Identities=13% Similarity=0.140 Sum_probs=70.4
Q ss_pred eeCceEEeeecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEE
Q 046579 129 SCNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIE 208 (416)
Q Consensus 129 s~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~ 208 (416)
+.+|.+++... ....+.++|+-.+....++......... ....++.+++. .+ +++...... .-.+.
T Consensus 38 ~~~g~l~v~~~----~~~~i~~~d~~g~~~~~~~~~~~~~~~~--~~p~~i~~~~~-~g--~l~v~~~~~-----~~~i~ 103 (286)
T 1q7f_A 38 NAQNDIIVADT----NNHRIQIFDKEGRFKFQFGECGKRDSQL--LYPNRVAVVRN-SG--DIIVTERSP-----THQIQ 103 (286)
T ss_dssp CTTCCEEEEEG----GGTEEEEECTTSCEEEEECCBSSSTTCB--SSEEEEEEETT-TT--EEEEEECGG-----GCEEE
T ss_pred CCCCCEEEEEC----CCCEEEEECCCCcEEEEecccCCCcccc--cCceEEEEEcC-CC--eEEEEcCCC-----CCEEE
Confidence 34566655543 2456889998866655565432111111 12234555322 22 232222110 12678
Q ss_pred EEECCCCCeeeccCCCccccccccCCcEEE--ccEEEEEee-CCcEEEEEcCCceEeecCCCCCCCcccccceeEEEEe-
Q 046579 209 IYSSKTGPWRLSGGSFTAPSVINFRGGVFW--NGAIHWVST-HGSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGES- 284 (416)
Q Consensus 209 vyss~t~~W~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~-~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~- 284 (416)
+|+.....-+...... . ....++.+ +|.+|.... .+.|..||...+....+..+.. .. ....+...
T Consensus 104 ~~d~~g~~~~~~~~~~-~----~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~---~~--~p~~i~~~~ 173 (286)
T 1q7f_A 104 IYNQYGQFVRKFGATI-L----QHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKH---LE--FPNGVVVND 173 (286)
T ss_dssp EECTTSCEEEEECTTT-C----SCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTT---CS--SEEEEEECS
T ss_pred EECCCCcEEEEecCcc-C----CCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCc---cC--CcEEEEECC
Confidence 8884333222221110 0 11122333 577766543 3578999987766655543211 10 11224433
Q ss_pred CCeEEEEEEecCCcCeEEEEEE
Q 046579 285 RGHLHLIEIYGPCTALFNVYEM 306 (416)
Q Consensus 285 ~G~L~~v~~~~~~~~~l~iW~l 306 (416)
+|+|++..... ..+.+|..
T Consensus 174 ~g~l~v~~~~~---~~i~~~~~ 192 (286)
T 1q7f_A 174 KQEIFISDNRA---HCVKVFNY 192 (286)
T ss_dssp SSEEEEEEGGG---TEEEEEET
T ss_pred CCCEEEEECCC---CEEEEEcC
Confidence 68877654322 46777654
No 100
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=33.26 E-value=2.1e+02 Score=25.15 Aligned_cols=24 Identities=17% Similarity=0.220 Sum_probs=15.0
Q ss_pred cEEEEEeeCCcEEEEEcCCceEee
Q 046579 240 GAIHWVSTHGSSLYFDVDQEKLRE 263 (416)
Q Consensus 240 G~lyw~~~~~~il~fD~~~e~~~~ 263 (416)
|.+.-...++.|..+|..+.+|..
T Consensus 262 ~~l~s~~~dg~v~iw~~~~~~~~~ 285 (330)
T 2hes_X 262 GLIASVGADGVLAVYEEVDGEWKV 285 (330)
T ss_dssp SCEEEEETTSCEEEEEEETTEEEE
T ss_pred CEEEEEeCCCEEEEEEcCCCceEE
Confidence 333333445678889988876644
No 101
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=32.98 E-value=48 Score=30.46 Aligned_cols=26 Identities=4% Similarity=-0.079 Sum_probs=19.0
Q ss_pred EEEE-eeCCeEEEEEcCCCcEEEeeec
Q 046579 361 YLVL-HLPKKAVRYNLKDRTFKKLHDV 386 (416)
Q Consensus 361 ~i~l-~~~~~l~~ydl~~~~~~~v~~~ 386 (416)
.+++ ..++.++++|.++++..+..++
T Consensus 175 ~v~~~~~dg~v~a~d~~tG~~~W~~~~ 201 (369)
T 2hz6_A 175 SHFVSNGDGLVVTVDSESGDVLWIQNY 201 (369)
T ss_dssp CEEEEETSCEEEEECTTTCCEEEEEEC
T ss_pred eEEEECCCCEEEEEECCCCcEEEEecC
Confidence 3444 5578899999999987776654
No 102
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=32.13 E-value=2.7e+02 Score=24.76 Aligned_cols=195 Identities=7% Similarity=-0.054 Sum_probs=88.5
Q ss_pred eCceEEeeecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEE
Q 046579 130 CNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEI 209 (416)
Q Consensus 130 ~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~v 209 (416)
.++.++... .++.+.|||..+++......... .++. .....+.+.|. +.+ ++...... .+.+
T Consensus 92 ~d~~l~~~s-----~dg~v~lWd~~~~~~~~~~~~~~-~~H~--~~V~~v~~spd--g~~-l~sgs~d~-------~i~i 153 (344)
T 4gqb_B 92 GERGILVAS-----DSGAVELWELDENETLIVSKFCK-YEHD--DIVSTVSVLSS--GTQ-AVSGSKDI-------CIKV 153 (344)
T ss_dssp TTTEEEEEE-----TTSEEEEEEECTTSSCEEEEEEE-ECCS--SCEEEEEECTT--SSE-EEEEETTS-------CEEE
T ss_pred CCCeEEEEE-----CCCEEEEEeccCCCceeEeeccc-cCCC--CCEEEEEECCC--CCE-EEEEeCCC-------eEEE
Confidence 345555443 25678999999887543322111 0111 12234556553 333 33222222 6888
Q ss_pred EECCCCCeeec-cCCCccccccccCCcEEE--ccE-EEE-EeeCCcEEEEEcCCceE-eecCCCCCCCcccccceeEEEE
Q 046579 210 YSSKTGPWRLS-GGSFTAPSVINFRGGVFW--NGA-IHW-VSTHGSSLYFDVDQEKL-REMPMPPIPDEWEERRHQYFGE 283 (416)
Q Consensus 210 yss~t~~W~~~-~~~~~~~~~~~~~~~v~~--~G~-lyw-~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~l~~ 283 (416)
++..++.=... ..... . -..+.+ +|. +.. -..++.|..+|+.+.+. ..+...... .....+.-
T Consensus 154 wd~~~~~~~~~~~~h~~-~-----V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~ 222 (344)
T 4gqb_B 154 WDLAQQVVLSSYRAHAA-Q-----VTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPG-----YLPTSLAW 222 (344)
T ss_dssp EETTTTEEEEEECCCSS-C-----EEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----C-----CCEEEEEE
T ss_pred EECCCCcEEEEEcCcCC-c-----eEEEEecCCCCCceeeeccccccccccccccceeeeeecceee-----ccceeeee
Confidence 88877642211 11000 0 001111 221 211 22345788899977543 333322110 01112222
Q ss_pred e--CCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcE
Q 046579 284 S--RGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSY 361 (416)
Q Consensus 284 ~--~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (416)
. ++++.+....+ ..+.||-+.... ...++.. . ...+.-+++... ...+
T Consensus 223 ~p~~~~~l~sg~~d---g~v~~wd~~~~~----~~~~~~~---------h-----------~~~v~~v~fsp~---g~~~ 272 (344)
T 4gqb_B 223 HPQQSEVFVFGDEN---GTVSLVDTKSTS----CVLSSAV---------H-----------SQCVTGLVFSPH---SVPF 272 (344)
T ss_dssp CSSCTTEEEEEETT---SEEEEEESCC------CCEEEEC---------C-----------SSCEEEEEECSS---SSCC
T ss_pred cCCCCcceEEeccC---CcEEEEECCCCc----EEEEEcC---------C-----------CCCEEEEEEccC---CCeE
Confidence 2 45555544333 579999776422 1222210 0 022344556542 1234
Q ss_pred EEE-eeCCeEEEEEcCCCcEEEe
Q 046579 362 LVL-HLPKKAVRYNLKDRTFKKL 383 (416)
Q Consensus 362 i~l-~~~~~l~~ydl~~~~~~~v 383 (416)
|.- ..++.+.+||+++++..+.
T Consensus 273 lasgs~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 273 LASLSEDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp EEEEETTSCEEEECTTCCEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEE
Confidence 443 5678999999999876553
No 103
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=31.86 E-value=2.6e+02 Score=24.44 Aligned_cols=35 Identities=6% Similarity=-0.002 Sum_probs=22.0
Q ss_pred eEEEEeecCCCCCCcEEEE-eeCCeEEEEEcCCCcEEEee
Q 046579 346 YSILCVVREENDDDSYLVL-HLPKKAVRYNLKDRTFKKLH 384 (416)
Q Consensus 346 ~~~~~~~~~~~~~~~~i~l-~~~~~l~~ydl~~~~~~~v~ 384 (416)
+.-+++.. ++.+|+. ..++.+..||+++++.....
T Consensus 205 v~~~~~~~----~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 240 (372)
T 1k8k_C 205 VHGVCFSA----NGSRVAWVSHDSTVCLADADKKMAVATL 240 (372)
T ss_dssp EEEEEECS----SSSEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred EEEEEECC----CCCEEEEEeCCCEEEEEECCCCceeEEE
Confidence 34455543 3445555 56789999999887755443
No 104
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=31.81 E-value=2.4e+02 Score=24.10 Aligned_cols=131 Identities=8% Similarity=-0.048 Sum_probs=62.7
Q ss_pred CceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCCeeec-cCC
Q 046579 145 RRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGPWRLS-GGS 223 (416)
Q Consensus 145 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~-~~~ 223 (416)
.+.+.|||..+++....-.... .....+.+.|. +.+ ++...... .+.+|+..++.-... ...
T Consensus 162 dg~v~~~d~~~~~~~~~~~~~~-------~~i~~~~~~~~--~~~-l~~~~~dg-------~i~~~d~~~~~~~~~~~~~ 224 (337)
T 1gxr_A 162 DGNIAVWDLHNQTLVRQFQGHT-------DGASCIDISND--GTK-LWTGGLDN-------TVRSWDLREGRQLQQHDFT 224 (337)
T ss_dssp TSCEEEEETTTTEEEEEECCCS-------SCEEEEEECTT--SSE-EEEEETTS-------EEEEEETTTTEEEEEEECS
T ss_pred CCcEEEEeCCCCceeeeeeccc-------CceEEEEECCC--CCE-EEEEecCC-------cEEEEECCCCceEeeecCC
Confidence 4557888887776543211111 11233555553 233 33222222 788888877643221 110
Q ss_pred CccccccccCCcEE--EccE-EEEEeeCCcEEEEEcCCceEeecCCCCCCCcccccceeEEEEe-CCeEEEEEEecCCcC
Q 046579 224 FTAPSVINFRGGVF--WNGA-IHWVSTHGSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGES-RGHLHLIEIYGPCTA 299 (416)
Q Consensus 224 ~~~~~~~~~~~~v~--~~G~-lyw~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~ 299 (416)
.. -..+. -+|. +.....++.|..+|+.+.+...+.... .....+.-. +|++.++...+ .
T Consensus 225 ~~-------v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~d---g 287 (337)
T 1gxr_A 225 SQ-------IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHE-------SCVLSLKFAYCGKWFVSTGKD---N 287 (337)
T ss_dssp SC-------EEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCS-------SCEEEEEECTTSSEEEEEETT---S
T ss_pred Cc-------eEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCc-------cceeEEEECCCCCEEEEecCC---C
Confidence 00 01111 1343 333334567889999876544332211 111223333 66665554433 5
Q ss_pred eEEEEEEeCC
Q 046579 300 LFNVYEMKTD 309 (416)
Q Consensus 300 ~l~iW~l~~~ 309 (416)
.+.||.++..
T Consensus 288 ~i~~~~~~~~ 297 (337)
T 1gxr_A 288 LLNAWRTPYG 297 (337)
T ss_dssp EEEEEETTTC
T ss_pred cEEEEECCCC
Confidence 7999988753
No 105
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=31.77 E-value=2.6e+02 Score=24.43 Aligned_cols=72 Identities=4% Similarity=-0.058 Sum_probs=44.0
Q ss_pred CCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE
Q 046579 285 RGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL 364 (416)
Q Consensus 285 ~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l 364 (416)
+|++.++...+ ..+.||.++.. ....++.... ..+.-+++.. ++.++..
T Consensus 213 ~~~~l~~~~~d---~~i~i~d~~~~----~~~~~~~~~~--------------------~~v~~~~~~~----~~~~l~~ 261 (372)
T 1k8k_C 213 NGSRVAWVSHD---STVCLADADKK----MAVATLASET--------------------LPLLAVTFIT----ESSLVAA 261 (372)
T ss_dssp SSSEEEEEETT---TEEEEEEGGGT----TEEEEEECSS--------------------CCEEEEEEEE----TTEEEEE
T ss_pred CCCEEEEEeCC---CEEEEEECCCC----ceeEEEccCC--------------------CCeEEEEEec----CCCEEEE
Confidence 56555544333 57999988753 2333332110 1233455543 4667777
Q ss_pred eeCCeEEEEEcCC--CcEEEeeecC
Q 046579 365 HLPKKAVRYNLKD--RTFKKLHDVA 387 (416)
Q Consensus 365 ~~~~~l~~ydl~~--~~~~~v~~~~ 387 (416)
..++.+..||+++ ++|..+..++
T Consensus 262 ~~d~~i~i~~~~~~~~~~~~~~~~~ 286 (372)
T 1k8k_C 262 GHDCFPVLFTYDSAAGKLSFGGRLD 286 (372)
T ss_dssp ETTSSCEEEEEETTTTEEEECCCCC
T ss_pred EeCCeEEEEEccCcCceEEEeeccC
Confidence 7888999999999 8888776554
No 106
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=31.12 E-value=2e+02 Score=28.22 Aligned_cols=57 Identities=16% Similarity=0.182 Sum_probs=36.1
Q ss_pred EEEEEECCCC--CeeeccCCCccccccccCCcEEEccEEEEEee------CCcEEEEEcCC--ceEee
Q 046579 206 QIEIYSSKTG--PWRLSGGSFTAPSVINFRGGVFWNGAIHWVST------HGSSLYFDVDQ--EKLRE 263 (416)
Q Consensus 206 ~~~vyss~t~--~W~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~------~~~il~fD~~~--e~~~~ 263 (416)
.+..++..|+ .|+......... ......++..+|.+|.... ++.|.+||..+ ..|+.
T Consensus 126 ~l~alD~~tG~~~W~~~~~~~~~~-~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 126 HLLALDAKTGKINWEVEVCDPKVG-STLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp EEEEEETTTCCEEEEEECCCGGGT-CBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCCEEEEecCCCCCcc-ceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 5777887776 488542211111 1234566778999998765 46899999976 45654
No 107
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=30.58 E-value=2.8e+02 Score=24.37 Aligned_cols=181 Identities=11% Similarity=0.109 Sum_probs=88.3
Q ss_pred CceEEEEccCCcceEe-cCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCC--eeecc
Q 046579 145 RRNYYVYNPTNKQYTI-LPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGP--WRLSG 221 (416)
Q Consensus 145 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~--W~~~~ 221 (416)
++.+.|||..+++... ++.... ....+.+.|. +.+ ++...... .+.+|+..++. .+...
T Consensus 76 Dg~v~iWd~~~~~~~~~~~~~~~--------~v~~~~~s~~--~~~-l~s~~~d~-------~v~iw~~~~~~~~~~~~~ 137 (340)
T 1got_B 76 DGKLIIWDSYTTNKVHAIPLRSS--------WVMTCAYAPS--GNY-VACGGLDN-------ICSIYNLKTREGNVRVSR 137 (340)
T ss_dssp TTEEEEEETTTCCEEEEEECSSS--------CEEEEEECTT--SSE-EEEEETTC-------EEEEEETTTCSBSCEEEE
T ss_pred CCcEEEEECCCCCcceEeecCCc--------cEEEEEECCC--CCE-EEEEeCCC-------eEEEEECccCCCcceeEE
Confidence 5678899988877543 332211 1233556653 343 22222221 78888887653 22111
Q ss_pred CCCccccccccCCcEEEccEEEEEeeCCcEEEEEcCCceEee-cCCCCCCCcccccceeEEEEe-CCeEEEEEEecCCcC
Q 046579 222 GSFTAPSVINFRGGVFWNGAIHWVSTHGSSLYFDVDQEKLRE-MPMPPIPDEWEERRHQYFGES-RGHLHLIEIYGPCTA 299 (416)
Q Consensus 222 ~~~~~~~~~~~~~~v~~~G~lyw~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~ 299 (416)
...... .........-+|.+.--..++.|..+|+.+.+... +.... .....+.-. +|++.+....+ .
T Consensus 138 ~~~~h~-~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~l~sg~~d---~ 206 (340)
T 1got_B 138 ELAGHT-GYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHT-------GDVMSLSLAPDTRLFVSGACD---A 206 (340)
T ss_dssp EEECCS-SCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS-------SCEEEEEECTTSSEEEEEETT---S
T ss_pred EecCCC-ccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCC-------CceEEEEECCCCCEEEEEeCC---C
Confidence 000000 00000111224454444455678899998765432 22110 111223333 66665554433 5
Q ss_pred eEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE-eeCCeEEEEEcCCC
Q 046579 300 LFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL-HLPKKAVRYNLKDR 378 (416)
Q Consensus 300 ~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-~~~~~l~~ydl~~~ 378 (416)
.+.||-+... ....++... . ..+.-+++.. ++.+|.. ..++.+..||++++
T Consensus 207 ~v~~wd~~~~----~~~~~~~~h------~--------------~~v~~v~~~p----~~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 207 SAKLWDVREG----MCRQTFTGH------E--------------SDINAICFFP----NGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp CEEEEETTTC----SEEEEECCC------S--------------SCEEEEEECT----TSSEEEEEETTSCEEEEETTTT
T ss_pred cEEEEECCCC----eeEEEEcCC------c--------------CCEEEEEEcC----CCCEEEEEcCCCcEEEEECCCC
Confidence 7999987642 223332110 0 2234455654 3555555 45789999999887
Q ss_pred cEEE
Q 046579 379 TFKK 382 (416)
Q Consensus 379 ~~~~ 382 (416)
+...
T Consensus 259 ~~~~ 262 (340)
T 1got_B 259 QELM 262 (340)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 6443
No 108
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=29.91 E-value=3e+02 Score=24.62 Aligned_cols=108 Identities=5% Similarity=0.014 Sum_probs=53.8
Q ss_pred eeCCcEEEEEcCCceEeecCCCCCCCcccccceeEEEE--eCCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccc
Q 046579 246 STHGSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGE--SRGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGG 323 (416)
Q Consensus 246 ~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~--~~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~ 323 (416)
..++.|..+|+.+.+...+-....+... ......+.. .++.+.+....+ ..+.||-+..... ....+.
T Consensus 177 s~D~~i~~wd~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~sgs~D---~~v~~wd~~~~~~---~~~~~~--- 246 (380)
T 3iz6_a 177 SGDQTCVLWDVTTGQRISIFGSEFPSGH-TADVLSLSINSLNANMFISGSCD---TTVRLWDLRITSR---AVRTYH--- 246 (380)
T ss_dssp CTTSCEEEECTTTCCEEEEECCCSSSSC-CSCEEEEEECSSSCCEEEEEETT---SCEEEEETTTTCC---CCEEEC---
T ss_pred CCCCcEEEEEcCCCcEEEEeecccCCCC-ccCeEEEEeecCCCCEEEEEECC---CeEEEEECCCCCc---ceEEEC---
Confidence 3456788899987654332111111111 111112222 256666655433 5799998763211 111110
Q ss_pred cccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE-eeCCeEEEEEcCCCcEEEee
Q 046579 324 VTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL-HLPKKAVRYNLKDRTFKKLH 384 (416)
Q Consensus 324 l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-~~~~~l~~ydl~~~~~~~v~ 384 (416)
. + ...+.-+++.+ ++..|.. ..++.+..||+++++...+.
T Consensus 247 ------~--------h---~~~v~~v~~~p----~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 287 (380)
T 3iz6_a 247 ------G--------H---EGDINSVKFFP----DGQRFGTGSDDGTCRLFDMRTGHQLQVY 287 (380)
T ss_dssp ------C--------C---SSCCCEEEECT----TSSEEEEECSSSCEEEEETTTTEEEEEE
T ss_pred ------C--------c---CCCeEEEEEec----CCCeEEEEcCCCeEEEEECCCCcEEEEe
Confidence 0 0 01223455543 3445444 46789999999988765554
No 109
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=29.77 E-value=4.4e+02 Score=26.37 Aligned_cols=202 Identities=7% Similarity=-0.066 Sum_probs=0.0
Q ss_pred eEEEeeeCceEEeeecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCC
Q 046579 124 IKVLQSCNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDG 203 (416)
Q Consensus 124 ~~~~~s~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~ 203 (416)
..+.-+-+|-.+.... ..+.+.|||..+++...--.... .....+.+.| +.-.++......
T Consensus 17 ~~i~~sp~~~~la~~~----~~g~v~iwd~~~~~~~~~~~~~~-------~~v~~~~~s~---~~~~l~~~~~dg----- 77 (814)
T 3mkq_A 17 KGIDFHPTEPWVLTTL----YSGRVEIWNYETQVEVRSIQVTE-------TPVRAGKFIA---RKNWIIVGSDDF----- 77 (814)
T ss_dssp EEEEECSSSSEEEEEE----TTSEEEEEETTTTEEEEEEECCS-------SCEEEEEEEG---GGTEEEEEETTS-----
T ss_pred EEEEECCCCCEEEEEe----CCCEEEEEECCCCceEEEEecCC-------CcEEEEEEeC---CCCEEEEEeCCC-----
Q ss_pred ceEEEEEECCCCCeeeccCCCccccccccCCcEEEcc-EEEEEeeCCcEEEEEcCCc-eEeecCCCCCCCcccccceeEE
Q 046579 204 HYQIEIYSSKTGPWRLSGGSFTAPSVINFRGGVFWNG-AIHWVSTHGSSLYFDVDQE-KLREMPMPPIPDEWEERRHQYF 281 (416)
Q Consensus 204 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G-~lyw~~~~~~il~fD~~~e-~~~~i~~P~~~~~~~~~~~~~l 281 (416)
.+.+|+..++.....-...... ...-...-+| .+.-...++.|..+|+.+. .....-. .+......+
T Consensus 78 --~i~vw~~~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~------~~~~~v~~~ 146 (814)
T 3mkq_A 78 --RIRVFNYNTGEKVVDFEAHPDY---IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE------GHEHFVMCV 146 (814)
T ss_dssp --EEEEEETTTCCEEEEEECCSSC---EEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE------CCSSCEEEE
T ss_pred --eEEEEECCCCcEEEEEecCCCC---EEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc------CCCCcEEEE
Q ss_pred EEe--CCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCC
Q 046579 282 GES--RGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDD 359 (416)
Q Consensus 282 ~~~--~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (416)
.-. +|.+.++...+ ..+.+|.++...........-. .....+++.... ++
T Consensus 147 ~~~p~~~~~l~~~~~d---g~v~vwd~~~~~~~~~~~~~~~-----------------------~~v~~~~~~~~~--~~ 198 (814)
T 3mkq_A 147 AFNPKDPSTFASGCLD---RTVKVWSLGQSTPNFTLTTGQE-----------------------RGVNYVDYYPLP--DK 198 (814)
T ss_dssp EEETTEEEEEEEEETT---SEEEEEETTCSSCSEEEECCCT-----------------------TCCCEEEECCST--TC
T ss_pred EEEcCCCCEEEEEeCC---CeEEEEECCCCcceeEEecCCC-----------------------CCEEEEEEEECC--CC
Q ss_pred cEEEE-eeCCeEEEEEcCCCcEEEe
Q 046579 360 SYLVL-HLPKKAVRYNLKDRTFKKL 383 (416)
Q Consensus 360 ~~i~l-~~~~~l~~ydl~~~~~~~v 383 (416)
.+++. ..++.+..||+++++....
T Consensus 199 ~~l~~~~~dg~i~~~d~~~~~~~~~ 223 (814)
T 3mkq_A 199 PYMITASDDLTIKIWDYQTKSCVAT 223 (814)
T ss_dssp CEEEEECTTSEEEEEETTTTEEEEE
T ss_pred CEEEEEeCCCEEEEEECCCCcEEEE
No 110
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=29.40 E-value=1.8e+02 Score=29.14 Aligned_cols=57 Identities=18% Similarity=0.164 Sum_probs=35.9
Q ss_pred EEEEEECCCCC--eeeccCCCccccccccCCcEEEccEEEEEee------CCcEEEEEcCC--ceEee
Q 046579 206 QIEIYSSKTGP--WRLSGGSFTAPSVINFRGGVFWNGAIHWVST------HGSSLYFDVDQ--EKLRE 263 (416)
Q Consensus 206 ~~~vyss~t~~--W~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~------~~~il~fD~~~--e~~~~ 263 (416)
.+..++..|++ |+......... ......++..+|.+|.-.. ++.|.+||..+ ..|+.
T Consensus 128 ~l~alD~~tG~~~W~~~~~~~~~~-~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 128 RLIALDAKTGKAIWSQQTTDPAKP-YSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp EEEEEETTTCCEEEEEECSCTTSS-CBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCCEeeeeccCCCCCc-ceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 67778877764 88653211111 1233566778999988654 35799999876 44664
No 111
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=29.18 E-value=2.5e+02 Score=23.33 Aligned_cols=135 Identities=15% Similarity=0.141 Sum_probs=69.1
Q ss_pred CCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCC-CCeeeccC
Q 046579 144 PRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKT-GPWRLSGG 222 (416)
Q Consensus 144 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t-~~W~~~~~ 222 (416)
....++++|+.+++...+..... ....+.+.|. +.+-++. ... .+.+++..+ +.......
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~--------~v~~~~~spd--g~~l~~~--~~~-------~i~~~d~~~~~~~~~~~~ 80 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPE--------LFEAPNWSPD--GKYLLLN--SEG-------LLYRLSLAGDPSPEKVDT 80 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESS--------CCEEEEECTT--SSEEEEE--ETT-------EEEEEESSSCCSCEECCC
T ss_pred cceeEEEEeCCCCceeeeccCCc--------ceEeeEECCC--CCEEEEE--cCC-------eEEEEeCCCCCCceEecc
Confidence 35679999999999876644321 1223455553 4443332 221 789999988 76664421
Q ss_pred CCccccccccCCcEEEccE-EEEEee----CCcEEEEEcCCceEeecCCCCCCCcccccceeEEEEe-CCeE-EEEEEec
Q 046579 223 SFTAPSVINFRGGVFWNGA-IHWVST----HGSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGES-RGHL-HLIEIYG 295 (416)
Q Consensus 223 ~~~~~~~~~~~~~v~~~G~-lyw~~~----~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~G~L-~~v~~~~ 295 (416)
..... ........-+|. +++... ...|..+|+.+.+...+..... ...+.-. +|+. ++....+
T Consensus 81 ~~~~~--~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~spdg~~l~~~~~~~ 150 (297)
T 2ojh_A 81 GFATI--CNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP--------SYWHGWSPDGKSFTYCGIRD 150 (297)
T ss_dssp TTCCC--BCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS--------EEEEEECTTSSEEEEEEEET
T ss_pred ccccc--cccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC--------ccceEECCCCCEEEEEECCC
Confidence 11100 011111122453 444442 2367778887766544432211 1112222 5654 4344333
Q ss_pred CCcCeEEEEEEeCCC
Q 046579 296 PCTALFNVYEMKTDY 310 (416)
Q Consensus 296 ~~~~~l~iW~l~~~~ 310 (416)
..+.||.++...
T Consensus 151 ---~~~~l~~~~~~~ 162 (297)
T 2ojh_A 151 ---QVFDIYSMDIDS 162 (297)
T ss_dssp ---TEEEEEEEETTT
T ss_pred ---CceEEEEEECCC
Confidence 468999987543
No 112
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=28.97 E-value=90 Score=25.32 Aligned_cols=40 Identities=15% Similarity=0.394 Sum_probs=26.7
Q ss_pred ceEEEEccCCc-ceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEE
Q 046579 146 RNYYVYNPTNK-QYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVR 195 (416)
Q Consensus 146 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~ 195 (416)
-.++++||.|+ .|...-... ..+.+.+|+. .+.|+|+.+.
T Consensus 16 A~Vm~~D~~tk~~WvP~g~~~---------~~V~i~~d~~-rnsyRIvg~~ 56 (168)
T 1i2h_A 16 AHVFQIDPNTKKNWVPTSKHA---------VTVSYFYDST-RNVYRIISLD 56 (168)
T ss_dssp EEEEEECTTSSCCSEESCSSC---------EEEEEEEETT-TTEEEEEEEE
T ss_pred EEEEEECCCCCCceeecCCCC---------eEEEEEEcCC-CCEEEEEEcc
Confidence 35899999997 885422211 2445668876 4679999865
No 113
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=28.81 E-value=2.8e+02 Score=23.83 Aligned_cols=30 Identities=13% Similarity=0.008 Sum_probs=19.3
Q ss_pred eEEEEeecCCCCCCcEEEE-eeCCeEEEEEcCCCc
Q 046579 346 YSILCVVREENDDDSYLVL-HLPKKAVRYNLKDRT 379 (416)
Q Consensus 346 ~~~~~~~~~~~~~~~~i~l-~~~~~l~~ydl~~~~ 379 (416)
+.-+++.. ++.+|+. ..++.+.+||++|++
T Consensus 309 v~~l~~s~----dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 309 CTSLAWSA----DGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEECT----TSSEEEEEETTSCEEEEEEEC--
T ss_pred EEEEEECC----CCCEEEEEeCCCEEEEEeCCCcC
Confidence 34455543 4666665 457899999999875
No 114
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=27.58 E-value=1.8e+02 Score=29.40 Aligned_cols=58 Identities=17% Similarity=0.227 Sum_probs=36.5
Q ss_pred EEEEEECCCCC--eeeccC-CCccccccccCCcEEEccEEEEEee------CCcEEEEEcCCc--eEeec
Q 046579 206 QIEIYSSKTGP--WRLSGG-SFTAPSVINFRGGVFWNGAIHWVST------HGSSLYFDVDQE--KLREM 264 (416)
Q Consensus 206 ~~~vyss~t~~--W~~~~~-~~~~~~~~~~~~~v~~~G~lyw~~~------~~~il~fD~~~e--~~~~i 264 (416)
.+..++..|++ |+.... ..... ......++..+|.+|.-.. ++.|.+||..+. .|+.-
T Consensus 132 ~l~AlDa~TG~~~W~~~~~~~~~~~-~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 132 RLEAIDAKTGQRAWSVDTRADHKRS-YTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEEEETTTCCEEEEEECCSCTTSC-CBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEeeeecCcCCCCCC-ccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 67778877774 886532 11111 1234566778999988653 357999998764 46643
No 115
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=27.48 E-value=3e+02 Score=23.79 Aligned_cols=150 Identities=11% Similarity=0.058 Sum_probs=72.0
Q ss_pred eeCceEEeeecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEE
Q 046579 129 SCNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIE 208 (416)
Q Consensus 129 s~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~ 208 (416)
+.+|-|++... ....++++|+.+++...+..... ....++.+|+. +. ++....... .....+.
T Consensus 53 ~~~g~l~~~~~----~~~~i~~~d~~~~~~~~~~~~~~-------~~~~~i~~~~d--g~--l~v~~~~~~--~~~~~i~ 115 (333)
T 2dg1_A 53 DRQGQLFLLDV----FEGNIFKINPETKEIKRPFVSHK-------ANPAAIKIHKD--GR--LFVCYLGDF--KSTGGIF 115 (333)
T ss_dssp CTTSCEEEEET----TTCEEEEECTTTCCEEEEEECSS-------SSEEEEEECTT--SC--EEEEECTTS--SSCCEEE
T ss_pred CCCCCEEEEEC----CCCEEEEEeCCCCcEEEEeeCCC-------CCcceEEECCC--Cc--EEEEeCCCC--CCCceEE
Confidence 34666655443 24579999999998776532111 12234566664 33 222222110 0112677
Q ss_pred EEECCCCCeeeccCCCccccccccCCcEEE--ccEEEEEeeC-------CcEEEEEcCCceEeecCCCCCCCccccccee
Q 046579 209 IYSSKTGPWRLSGGSFTAPSVINFRGGVFW--NGAIHWVSTH-------GSSLYFDVDQEKLREMPMPPIPDEWEERRHQ 279 (416)
Q Consensus 209 vyss~t~~W~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~-------~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~ 279 (416)
+|+..++.-+..-...... ..-..+.+ +|.+|..... ..|..+|..+.++..+... .. ...
T Consensus 116 ~~d~~~~~~~~~~~~~~~~---~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~--~~~ 185 (333)
T 2dg1_A 116 AATENGDNLQDIIEDLSTA---YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN-----IS--VAN 185 (333)
T ss_dssp EECTTSCSCEEEECSSSSC---CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE-----ES--SEE
T ss_pred EEeCCCCEEEEEEccCccC---CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC-----CC--ccc
Confidence 8888777654221100000 00112222 5776665442 3688888887666544210 00 011
Q ss_pred EEEEe-CCe-EEEEEEecCCcCeEEEEEEeC
Q 046579 280 YFGES-RGH-LHLIEIYGPCTALFNVYEMKT 308 (416)
Q Consensus 280 ~l~~~-~G~-L~~v~~~~~~~~~l~iW~l~~ 308 (416)
.+... +|+ |++.... ...+.+|.++.
T Consensus 186 ~i~~~~dg~~l~v~~~~---~~~i~~~d~~~ 213 (333)
T 2dg1_A 186 GIALSTDEKVLWVTETT---ANRLHRIALED 213 (333)
T ss_dssp EEEECTTSSEEEEEEGG---GTEEEEEEECT
T ss_pred ceEECCCCCEEEEEeCC---CCeEEEEEecC
Confidence 23333 565 5554321 24677777753
No 116
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=27.11 E-value=4.3e+02 Score=25.44 Aligned_cols=114 Identities=11% Similarity=0.110 Sum_probs=63.9
Q ss_pred ccEEEEEee--CCcEEEEEcCCceEee-cCCCCCCCcccccceeEEEEeC-CeEEEEEEecCCcCeEEEEEEeCCC---C
Q 046579 239 NGAIHWVST--HGSSLYFDVDQEKLRE-MPMPPIPDEWEERRHQYFGESR-GHLHLIEIYGPCTALFNVYEMKTDY---S 311 (416)
Q Consensus 239 ~G~lyw~~~--~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~~-G~L~~v~~~~~~~~~l~iW~l~~~~---~ 311 (416)
+|...+.+. ++.|.++|+.+.+... ++....|+... . ..+..-+ |.+++ ....+ ...+.||-.+... .
T Consensus 334 dg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~--g-~~~~~p~~g~~~~-s~~~~-d~~V~v~d~~~~~~~~~ 408 (543)
T 1nir_A 334 SHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGR--G-ANFVHPKYGPVWS-TSHLG-DGSISLIGTDPKNHPQY 408 (543)
T ss_dssp TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTT--C-EEEEETTTEEEEE-EEBSS-SSEEEEEECCTTTCTTT
T ss_pred CCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCC--C-cccCCCCCccEEE-eccCC-CceEEEEEeCCCCCchh
Confidence 565333332 4578889998876543 44322222111 1 1122234 55544 33211 2579999988532 2
Q ss_pred CceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEee--------CCeEEEEEcCCCcEE
Q 046579 312 GWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLHL--------PKKAVRYNLKDRTFK 381 (416)
Q Consensus 312 ~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~--------~~~l~~ydl~~~~~~ 381 (416)
.|..+.++....- ....+.++. ++..|++.. +..+.+||.++.+..
T Consensus 409 ~~~~v~~l~~~g~--------------------~~~~v~~~p----dg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 409 AWKKVAELQGQGG--------------------GSLFIKTHP----KSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp BTSEEEEEECSCS--------------------CCCCEECCT----TCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred cCeEEEEEEcCCC--------------------CceEEEcCC----CCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 4998888864320 011244433 577888854 569999999988754
No 117
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=26.81 E-value=1.3e+02 Score=22.50 Aligned_cols=44 Identities=16% Similarity=0.326 Sum_probs=29.6
Q ss_pred eEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEec
Q 046579 147 NYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNC 197 (416)
Q Consensus 147 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~ 197 (416)
.++++||.|++|. |......+ ...+.+..|+. .+.|+|+.....
T Consensus 12 ~V~~~d~~~~~W~--p~~~g~~g----vs~V~~~~d~~-~~~yrI~~~~l~ 55 (115)
T 1egx_A 12 TVMLYDDGNKRWL--PAGTGPQA----FSRVQIYHNPT-ANSFRVVGRKMQ 55 (115)
T ss_dssp ECBEECTTTSSCC--BSSCSCCC----CEEEEEEEETT-TTEEEEEEEESS
T ss_pred EEEEEcCCCCcee--ECCCCCCC----ccEEEEEEeCC-CCEEEEEEEEcC
Confidence 4789999999974 54331112 23566788876 578999877654
No 118
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=26.47 E-value=1.4e+02 Score=27.33 Aligned_cols=55 Identities=11% Similarity=-0.032 Sum_probs=32.8
Q ss_pred EEEEEECCCCCeeecc-CCCccc-cccc-cCCcEE-------EccEEEEEeeCCcEEEEEcCCce
Q 046579 206 QIEIYSSKTGPWRLSG-GSFTAP-SVIN-FRGGVF-------WNGAIHWVSTHGSSLYFDVDQEK 260 (416)
Q Consensus 206 ~~~vyss~t~~W~~~~-~~~~~~-~~~~-~~~~v~-------~~G~lyw~~~~~~il~fD~~~e~ 260 (416)
.+..|+..+|.|+..- .+.... .+.. ...+|. .+|.+|....++.+.++|+.+.+
T Consensus 68 ~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 68 NIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp EEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCC
T ss_pred EEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCc
Confidence 6677777777665321 110000 0011 344555 79999999999999999998754
No 119
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=25.72 E-value=2.9e+02 Score=22.92 Aligned_cols=108 Identities=12% Similarity=0.116 Sum_probs=57.2
Q ss_pred eCceEEeeecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEE
Q 046579 130 CNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEI 209 (416)
Q Consensus 130 ~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~v 209 (416)
.+|.+.+... ...++++|+-++....++.... ....++.+|+. +. ++...... -.+.+
T Consensus 76 ~~g~l~v~~~-----~~~i~~~d~~~~~~~~~~~~~~-------~~p~~i~~~~~--g~--l~v~~~~~------~~i~~ 133 (270)
T 1rwi_B 76 GAGTVYVTDF-----NNRVVTLAAGSNNQTVLPFDGL-------NYPEGLAVDTQ--GA--VYVADRGN------NRVVK 133 (270)
T ss_dssp TTCCEEEEET-----TTEEEEECTTCSCCEECCCCSC-------SSEEEEEECTT--CC--EEEEEGGG------TEEEE
T ss_pred CCCCEEEEcC-----CCEEEEEeCCCceEeeeecCCc-------CCCcceEECCC--CC--EEEEECCC------CEEEE
Confidence 3566555542 3568899998887766643221 12234667763 33 33222221 15677
Q ss_pred EECCCCCeeeccCCCccccccccCCcEEE--ccEEEEEee-CCcEEEEEcCCceEeec
Q 046579 210 YSSKTGPWRLSGGSFTAPSVINFRGGVFW--NGAIHWVST-HGSSLYFDVDQEKLREM 264 (416)
Q Consensus 210 yss~t~~W~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~-~~~il~fD~~~e~~~~i 264 (416)
|+.++......... ......++.+ +|.+|+... .+.|..||..+......
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~ 186 (270)
T 1rwi_B 134 LAAGSKTQTVLPFT-----GLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVL 186 (270)
T ss_dssp ECTTCCSCEECCCC-----SCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEEC
T ss_pred EECCCceeEeeccc-----cCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEee
Confidence 76655544322110 0111233433 578777654 35799999987665443
No 120
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=24.55 E-value=3.4e+02 Score=23.37 Aligned_cols=26 Identities=4% Similarity=-0.015 Sum_probs=20.1
Q ss_pred CCcEEEEeeCCeEEEEEcCCCcEEEee
Q 046579 358 DDSYLVLHLPKKAVRYNLKDRTFKKLH 384 (416)
Q Consensus 358 ~~~~i~l~~~~~l~~ydl~~~~~~~v~ 384 (416)
++. |++.....+..||.+.+.+..+.
T Consensus 249 ~G~-lwv~~~~gv~~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 249 GGW-LWSSSGTGVCVFDSDGQLLGHIP 274 (305)
T ss_dssp TSC-EEECCSSEEEEECTTSCEEEEEE
T ss_pred CCC-EEEecCCcEEEECCCCCEEEEEE
Confidence 354 78877778999999877777765
No 121
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=24.29 E-value=3.2e+02 Score=23.07 Aligned_cols=67 Identities=9% Similarity=0.232 Sum_probs=37.6
Q ss_pred eeCceEEeeecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEE
Q 046579 129 SCNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIE 208 (416)
Q Consensus 129 s~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~ 208 (416)
|.+|+|.+.. ++.+.|||..|++...+-...... .....+.+.+. +.+-+.. .... .+.
T Consensus 34 S~~~~lAvg~------D~tV~iWd~~tg~~~~~~~~~~~~-----~~V~~v~~~~~--~~~l~sg-s~Dg-------~v~ 92 (318)
T 4ggc_A 34 SSGNVLAVAL------DNSVYLWSASSGDILQLLQMEQPG-----EYISSVAWIKE--GNYLAVG-TSSA-------EVQ 92 (318)
T ss_dssp CTTSEEEEEE------TTEEEEEETTTCCEEEEEECCSTT-----CCEEEEEECTT--SSEEEEE-ETTS-------EEE
T ss_pred CCCCEEEEEe------CCEEEEEECCCCCEEEEEEecCCC-----CeEEEEEECCC--CCEEEEE-ECCC-------cEE
Confidence 4566554433 457999999999877543322111 12234556653 3443322 2222 788
Q ss_pred EEECCCCC
Q 046579 209 IYSSKTGP 216 (416)
Q Consensus 209 vyss~t~~ 216 (416)
+++..+++
T Consensus 93 iw~~~~~~ 100 (318)
T 4ggc_A 93 LWDVQQQK 100 (318)
T ss_dssp EEETTTTE
T ss_pred EeecCCce
Confidence 89888775
No 122
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=23.64 E-value=3.6e+02 Score=23.41 Aligned_cols=143 Identities=12% Similarity=0.112 Sum_probs=78.6
Q ss_pred eEEEEEECCCCCeeeccCCCccccccccCCcE-EEccEEEEEeeC-CcEEEEEcCC-ceEeecCCCCCCCcccccceeEE
Q 046579 205 YQIEIYSSKTGPWRLSGGSFTAPSVINFRGGV-FWNGAIHWVSTH-GSSLYFDVDQ-EKLREMPMPPIPDEWEERRHQYF 281 (416)
Q Consensus 205 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v-~~~G~lyw~~~~-~~il~fD~~~-e~~~~i~~P~~~~~~~~~~~~~l 281 (416)
-.+.+++..+++=...- +.+. . ....++ ..++.+|-+... +.+.+||.++ +.-..|+.+.. .+. +
T Consensus 65 S~v~~vD~~Tgkv~~~~-~l~~--~-~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~e--G~g------l 132 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQI-ELGK--R-YFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGE--GWG------L 132 (262)
T ss_dssp EEEEEECTTTCCEEEEE-ECCT--T-CCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCC------E
T ss_pred ceEEEEECCCCcEEEEE-ecCC--c-cceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCC--ceE------E
Confidence 37888888888643211 1110 0 112233 456689888764 5789999987 44566776542 221 3
Q ss_pred EEeCCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcE
Q 046579 282 GESRGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSY 361 (416)
Q Consensus 282 ~~~~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (416)
+..+++|++.. +. . .||+++-... ....+|....-. .|. ....-+.+. ++ .
T Consensus 133 t~dg~~L~~Sd---Gs-~--~i~~iDp~T~--~v~~~I~V~~~g--~~~-------------~~lNELe~~-----~G-~ 183 (262)
T 3nol_A 133 THNDQYLIMSD---GT-P--VLRFLDPESL--TPVRTITVTAHG--EEL-------------PELNELEWV-----DG-E 183 (262)
T ss_dssp EECSSCEEECC---SS-S--EEEEECTTTC--SEEEEEECEETT--EEC-------------CCEEEEEEE-----TT-E
T ss_pred ecCCCEEEEEC---CC-C--eEEEEcCCCC--eEEEEEEeccCC--ccc-------------cccceeEEE-----CC-E
Confidence 44456676642 21 2 3788885432 345555443210 010 000112222 23 4
Q ss_pred EEEe--eCCeEEEEEcCCCcEEEeeecCC
Q 046579 362 LVLH--LPKKAVRYNLKDRTFKKLHDVAP 388 (416)
Q Consensus 362 i~l~--~~~~l~~ydl~~~~~~~v~~~~~ 388 (416)
||.. ..+.+...|++|+++...-++.+
T Consensus 184 lyan~w~~~~I~vIDp~tG~V~~~Id~~~ 212 (262)
T 3nol_A 184 IFANVWQTNKIVRIDPETGKVTGIIDLNG 212 (262)
T ss_dssp EEEEETTSSEEEEECTTTCBEEEEEECTT
T ss_pred EEEEEccCCeEEEEECCCCcEEEEEECCc
Confidence 6664 46799999999999887766653
No 123
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=23.14 E-value=3.7e+02 Score=23.37 Aligned_cols=65 Identities=5% Similarity=-0.046 Sum_probs=35.7
Q ss_pred CeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE-eeCCeEEEEEcCC
Q 046579 299 ALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL-HLPKKAVRYNLKD 377 (416)
Q Consensus 299 ~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-~~~~~l~~ydl~~ 377 (416)
..+.||.+++....+.....+.-. . ..+.-+.+.+ ++.+|.- ..++.+..||+.+
T Consensus 129 ~~v~iwd~~~~~~~~~~~~~~~~h------~--------------~~v~~v~~~p----~~~~l~s~s~D~~i~iW~~~~ 184 (330)
T 2hes_X 129 KSVWIWETDESGEEYECISVLQEH------S--------------QDVKHVIWHP----SEALLASSSYDDTVRIWKDYD 184 (330)
T ss_dssp SCEEEEECCTTCCCCEEEEEECCC------S--------------SCEEEEEECS----SSSEEEEEETTSCEEEEEEET
T ss_pred CEEEEEeccCCCCCeEEEEEeccC------C--------------CceEEEEECC----CCCEEEEEcCCCeEEEEECCC
Confidence 579999986544456554443211 0 1233444443 3444444 4567888888877
Q ss_pred CcEEEeeecC
Q 046579 378 RTFKKLHDVA 387 (416)
Q Consensus 378 ~~~~~v~~~~ 387 (416)
+.++.+..+.
T Consensus 185 ~~~~~~~~~~ 194 (330)
T 2hes_X 185 DDWECVAVLN 194 (330)
T ss_dssp TEEEEEEEEC
T ss_pred CCeeEEEEcc
Confidence 7655555443
No 124
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=23.08 E-value=3.4e+02 Score=22.83 Aligned_cols=110 Identities=8% Similarity=0.037 Sum_probs=57.7
Q ss_pred EccEEEEEeeCCcEEEEEcCCceE-eecCCCCCCCcccccceeEEEEe-CCeEEEEEEecCCcCeEEEEEEeCCCCCceE
Q 046579 238 WNGAIHWVSTHGSSLYFDVDQEKL-REMPMPPIPDEWEERRHQYFGES-RGHLHLIEIYGPCTALFNVYEMKTDYSGWFV 315 (416)
Q Consensus 238 ~~G~lyw~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~ 315 (416)
-+|.+.-...++.|..+|+.+.+. ..+.... .....+.-. +|+|. .... ...+.||.++.. ..
T Consensus 194 ~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~-------~~i~~~~~~~~~~l~--~~~~--dg~v~iwd~~~~----~~ 258 (313)
T 3odt_A 194 DDGHFISCSNDGLIKLVDMHTGDVLRTYEGHE-------SFVYCIKLLPNGDIV--SCGE--DRTVRIWSKENG----SL 258 (313)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECCS-------SCEEEEEECTTSCEE--EEET--TSEEEEECTTTC----CE
T ss_pred CCCeEEEccCCCeEEEEECCchhhhhhhhcCC-------ceEEEEEEecCCCEE--EEec--CCEEEEEECCCC----ce
Confidence 355644444556789999986543 3332211 111223333 55433 2222 257999987643 23
Q ss_pred EEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEEeeCCeEEEEEcCCCcEEEeeec
Q 046579 316 KYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVLHLPKKAVRYNLKDRTFKKLHDV 386 (416)
Q Consensus 316 ~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~l~~ydl~~~~~~~v~~~ 386 (416)
...+.... ..+.-+++.. ++.++.-..++.+..||++++++....++
T Consensus 259 ~~~~~~~~--------------------~~i~~~~~~~----~~~~~~~~~dg~i~iw~~~~~~~~~~~~~ 305 (313)
T 3odt_A 259 KQVITLPA--------------------ISIWSVDCMS----NGDIIVGSSDNLVRIFSQEKSRWASEDEI 305 (313)
T ss_dssp EEEEECSS--------------------SCEEEEEECT----TSCEEEEETTSCEEEEESCGGGCCC----
T ss_pred eEEEeccC--------------------ceEEEEEEcc----CCCEEEEeCCCcEEEEeCCCCceeehhhh
Confidence 33332110 1233455543 35555556789999999999987765544
No 125
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=22.87 E-value=3.4e+02 Score=22.75 Aligned_cols=110 Identities=11% Similarity=0.066 Sum_probs=56.4
Q ss_pred eeeCceEEeeecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEE
Q 046579 128 QSCNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQI 207 (416)
Q Consensus 128 ~s~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~ 207 (416)
+..+|.|.+... ....++++++-++....+-.... ....++.+|+. + . +++..... .-.+
T Consensus 44 d~~~~~ly~~d~----~~~~I~~~~~~g~~~~~~~~~~~-------~~p~~ia~d~~-~-~-~lyv~d~~------~~~I 103 (267)
T 1npe_A 44 DCVDKVVYWTDI----SEPSIGRASLHGGEPTTIIRQDL-------GSPEGIALDHL-G-R-TIFWTDSQ------LDRI 103 (267)
T ss_dssp ETTTTEEEEEET----TTTEEEEEESSSCCCEEEECTTC-------CCEEEEEEETT-T-T-EEEEEETT------TTEE
T ss_pred ecCCCEEEEEEC----CCCEEEEEecCCCCcEEEEECCC-------CCccEEEEEec-C-C-eEEEEECC------CCEE
Confidence 334677776664 24678889988765443322110 12234666764 1 2 22222221 1267
Q ss_pred EEEECCCCCeeeccCCCccccccccCCcEEE---ccEEEEEeeC---CcEEEEEcCCceEe
Q 046579 208 EIYSSKTGPWRLSGGSFTAPSVINFRGGVFW---NGAIHWVSTH---GSSLYFDVDQEKLR 262 (416)
Q Consensus 208 ~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~---~~il~fD~~~e~~~ 262 (416)
.+++.....-+..... . .....++.+ +|.+||.... ..|..+++......
T Consensus 104 ~~~~~~g~~~~~~~~~-~----~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~ 159 (267)
T 1npe_A 104 EVAKMDGTQRRVLFDT-G----LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR 159 (267)
T ss_dssp EEEETTSCSCEEEECS-S----CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE
T ss_pred EEEEcCCCCEEEEEEC-C----CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcE
Confidence 7888765432222110 0 011223333 5899998754 47888998765443
No 126
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=22.57 E-value=3.9e+02 Score=23.41 Aligned_cols=76 Identities=11% Similarity=0.103 Sum_probs=0.0
Q ss_pred CCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE
Q 046579 285 RGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL 364 (416)
Q Consensus 285 ~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l 364 (416)
+|++.+....+ ..+.||.++ .+.|.....+...+- ..+.-+++.. ++.+|..
T Consensus 27 ~g~~las~~~D---~~i~iw~~~--~~~~~~~~~~~~~h~-------------------~~v~~~~~sp----~g~~l~s 78 (345)
T 3fm0_A 27 AGTLLASCGGD---RRIRIWGTE--GDSWICKSVLSEGHQ-------------------RTVRKVAWSP----CGNYLAS 78 (345)
T ss_dssp TSSCEEEEETT---SCEEEEEEE--TTEEEEEEEECSSCS-------------------SCEEEEEECT----TSSEEEE
T ss_pred CCCEEEEEcCC---CeEEEEEcC--CCcceeeeeeccccC-------------------CcEEEEEECC----CCCEEEE
Q ss_pred -eeCCeEEEEEcCCCcEEEeeecCC
Q 046579 365 -HLPKKAVRYNLKDRTFKKLHDVAP 388 (416)
Q Consensus 365 -~~~~~l~~ydl~~~~~~~v~~~~~ 388 (416)
..++.+..||+.+++.+.+..+.+
T Consensus 79 ~s~D~~v~iw~~~~~~~~~~~~~~~ 103 (345)
T 3fm0_A 79 ASFDATTCIWKKNQDDFECVTTLEG 103 (345)
T ss_dssp EETTSCEEEEEECCC-EEEEEEECC
T ss_pred EECCCcEEEEEccCCCeEEEEEccC
No 127
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=21.69 E-value=6.1e+02 Score=25.26 Aligned_cols=58 Identities=14% Similarity=0.185 Sum_probs=36.5
Q ss_pred EEEEEECCCCC--eeeccC-CCccccccccCCcEEEccEEEEEee------CCcEEEEEcCCc--eEeec
Q 046579 206 QIEIYSSKTGP--WRLSGG-SFTAPSVINFRGGVFWNGAIHWVST------HGSSLYFDVDQE--KLREM 264 (416)
Q Consensus 206 ~~~vyss~t~~--W~~~~~-~~~~~~~~~~~~~v~~~G~lyw~~~------~~~il~fD~~~e--~~~~i 264 (416)
.+..++..|++ |+.... ..... ......++..+|.+|.... ++.|.+||..+. .|+.-
T Consensus 139 ~l~alD~~tG~~~W~~~~~~~~~~~-~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 139 RLIALDAATGKEVWHQNTFEGQKGS-LTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp EEEEEETTTCCEEEEEETTTTCCSS-CBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEEeeecCCcCcCcC-cccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 57778877664 886422 11111 1234567778999998764 467999998764 56653
No 128
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=21.55 E-value=4.6e+02 Score=23.86 Aligned_cols=25 Identities=8% Similarity=0.078 Sum_probs=14.8
Q ss_pred CCcEEEEeeCCeEEEEEcCCCcEEE
Q 046579 358 DDSYLVLHLPKKAVRYNLKDRTFKK 382 (416)
Q Consensus 358 ~~~~i~l~~~~~l~~ydl~~~~~~~ 382 (416)
++.+|.-..++.+.+||+++++.+|
T Consensus 411 dg~~lasg~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 411 MGDTLASAMGYHILIWSQQEARTRK 435 (435)
T ss_dssp TSSCEEEECSSEEEECCCC------
T ss_pred CCCEEEEEcCCcEEEEECCcCeeeC
Confidence 4566666678899999999987664
No 129
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=21.36 E-value=4.5e+02 Score=23.59 Aligned_cols=149 Identities=11% Similarity=0.079 Sum_probs=68.7
Q ss_pred eCceEEeeecCCCCCCceEEEEccCCcceEecCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEE
Q 046579 130 CNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEI 209 (416)
Q Consensus 130 ~~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~v 209 (416)
.+|-.++... .+..+.|||..+++....-.... .....+.+.|. +.+ ++...... .+.+
T Consensus 133 ~dg~~l~s~~----~d~~i~iwd~~~~~~~~~~~~h~-------~~v~~~~~~p~--~~~-l~s~s~d~-------~v~i 191 (393)
T 1erj_A 133 PDGKFLATGA----EDRLIRIWDIENRKIVMILQGHE-------QDIYSLDYFPS--GDK-LVSGSGDR-------TVRI 191 (393)
T ss_dssp TTSSEEEEEE----TTSCEEEEETTTTEEEEEECCCS-------SCEEEEEECTT--SSE-EEEEETTS-------EEEE
T ss_pred CCCCEEEEEc----CCCeEEEEECCCCcEEEEEccCC-------CCEEEEEEcCC--CCE-EEEecCCC-------cEEE
Confidence 3554444432 35679999999887654322111 12234556653 333 33332222 7889
Q ss_pred EECCCCCeeeccCCCccccccccCCcEEE---ccEEEEEe-eCCcEEEEEcCCceEe-ecCCCCCCCcccccceeEEEEe
Q 046579 210 YSSKTGPWRLSGGSFTAPSVINFRGGVFW---NGAIHWVS-THGSSLYFDVDQEKLR-EMPMPPIPDEWEERRHQYFGES 284 (416)
Q Consensus 210 yss~t~~W~~~~~~~~~~~~~~~~~~v~~---~G~lyw~~-~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~l~~~ 284 (416)
++.+++.-...-.... .-..+.+ +|.+.... .++.|..+|+.+.+.. .+..+......+......+.-.
T Consensus 192 wd~~~~~~~~~~~~~~------~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~ 265 (393)
T 1erj_A 192 WDLRTGQCSLTLSIED------GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT 265 (393)
T ss_dssp EETTTTEEEEEEECSS------CEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEEC
T ss_pred EECCCCeeEEEEEcCC------CcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEEC
Confidence 9988775432210000 0011111 34333333 3457888998876543 2322211101111112223333
Q ss_pred -CCeEEEEEEecCCcCeEEEEEEeC
Q 046579 285 -RGHLHLIEIYGPCTALFNVYEMKT 308 (416)
Q Consensus 285 -~G~L~~v~~~~~~~~~l~iW~l~~ 308 (416)
+|++.+....+ ..+.||.+..
T Consensus 266 ~~g~~l~s~s~d---~~v~~wd~~~ 287 (393)
T 1erj_A 266 RDGQSVVSGSLD---RSVKLWNLQN 287 (393)
T ss_dssp TTSSEEEEEETT---SEEEEEEC--
T ss_pred CCCCEEEEEeCC---CEEEEEECCC
Confidence 66665554333 5899999875
No 130
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=21.11 E-value=4.1e+02 Score=23.12 Aligned_cols=158 Identities=11% Similarity=0.067 Sum_probs=72.5
Q ss_pred CceEEeeecCCCCCCceEEEEccCCcceEecCCCCcC----CCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceE
Q 046579 131 NGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRLHVD----RGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQ 206 (416)
Q Consensus 131 ~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~----~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~ 206 (416)
+|.+++.... ....+.++|+-.+....+...... .+.. ....++.+|+. . .. ++.... . .-.
T Consensus 154 ~g~lyv~d~~---~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~--~~p~gia~d~~-~-g~-l~v~d~-~-----~~~ 219 (329)
T 3fvz_A 154 TGAVFVSDGY---CNSRIVQFSPSGKFVTQWGEESSGSSPRPGQF--SVPHSLALVPH-L-DQ-LCVADR-E-----NGR 219 (329)
T ss_dssp TCCEEEEECS---SCCEEEEECTTSCEEEEECEECCSSSCCTTEE--SCEEEEEEETT-T-TE-EEEEET-T-----TTE
T ss_pred CCeEEEEeCC---CCCeEEEEcCCCCEEEEeccCCCCCCCCCccc--CCCcEEEEECC-C-CE-EEEEEC-C-----CCE
Confidence 6777777631 246688888654444444321110 0111 12345667764 1 22 222222 1 127
Q ss_pred EEEEECCCCCeeec-cCCCc--ccc--ccccCCcEEEccEEEEEeeC-CcEEEEEcCCceEeecCCCCCCCcccccceeE
Q 046579 207 IEIYSSKTGPWRLS-GGSFT--APS--VINFRGGVFWNGAIHWVSTH-GSSLYFDVDQEKLREMPMPPIPDEWEERRHQY 280 (416)
Q Consensus 207 ~~vyss~t~~W~~~-~~~~~--~~~--~~~~~~~v~~~G~lyw~~~~-~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~ 280 (416)
+.+|+..+++.... ..+.. ... .......+..+|.+|..... ..|..+|+.+.+....-.+.. .... ...-
T Consensus 220 I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~-~~~~--~p~~ 296 (329)
T 3fvz_A 220 IQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVR-KHFD--MPHD 296 (329)
T ss_dssp EEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSS-SCCS--SEEE
T ss_pred EEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCC-CccC--CeeE
Confidence 89999987776533 11100 000 00111122223433322111 268899987766544311111 1111 1112
Q ss_pred EEE-eCCeEEEEEEecCCcCeEEEEEEeC
Q 046579 281 FGE-SRGHLHLIEIYGPCTALFNVYEMKT 308 (416)
Q Consensus 281 l~~-~~G~L~~v~~~~~~~~~l~iW~l~~ 308 (416)
+.. .+|.|++.... ...+.+|.++.
T Consensus 297 ia~~~dG~lyvad~~---~~~I~~~~~~~ 322 (329)
T 3fvz_A 297 IVASEDGTVYIGDAH---TNTVWKFTLTE 322 (329)
T ss_dssp EEECTTSEEEEEESS---SCCEEEEEEEE
T ss_pred EEECCCCCEEEEECC---CCEEEEEeCCc
Confidence 433 37777776432 25788888875
No 131
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=20.69 E-value=5.9e+02 Score=24.76 Aligned_cols=201 Identities=8% Similarity=-0.034 Sum_probs=96.3
Q ss_pred CceEEeeecCCCCCCceEEEEccCCcceEe-cCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEE
Q 046579 131 NGLLLCSSSRAYQPRRNYYVYNPTNKQYTI-LPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEI 209 (416)
Q Consensus 131 ~GLvl~~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~v 209 (416)
++++++... ....+.|+|+.|++... +|-... .. ++.+.|. +.|-.+. ... -.+.+
T Consensus 166 ~~~~~V~~~----~~~~V~viD~~t~~v~~~i~~g~~-------p~--~v~~SpD--Gr~lyv~--~~d------g~V~v 222 (567)
T 1qks_A 166 ENLFSVTLR----DAGQIALIDGSTYEIKTVLDTGYA-------VH--ISRLSAS--GRYLFVI--GRD------GKVNM 222 (567)
T ss_dssp GGEEEEEET----TTTEEEEEETTTCCEEEEEECSSC-------EE--EEEECTT--SCEEEEE--ETT------SEEEE
T ss_pred CceEEEEeC----CCCeEEEEECCCCeEEEEEeCCCC-------cc--ceEECCC--CCEEEEE--cCC------CeEEE
Confidence 345555543 36779999999998764 443221 12 3456663 4553332 221 17889
Q ss_pred EECCCCCeeeccCCCccccccccCCcEEE-----cc-EEEEEeeC-CcEEEEEcCCceE-eecCCCCCCC---ccc-ccc
Q 046579 210 YSSKTGPWRLSGGSFTAPSVINFRGGVFW-----NG-AIHWVSTH-GSSLYFDVDQEKL-REMPMPPIPD---EWE-ERR 277 (416)
Q Consensus 210 yss~t~~W~~~~~~~~~~~~~~~~~~v~~-----~G-~lyw~~~~-~~il~fD~~~e~~-~~i~~P~~~~---~~~-~~~ 277 (416)
|+..+..-+.+.. .... .......+. +| .+|-.+.. +.+..+|..+.+- ..|+...... ++. ...
T Consensus 223 iD~~~~t~~~v~~-i~~G--~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~r 299 (567)
T 1qks_A 223 IDLWMKEPTTVAE-IKIG--SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPR 299 (567)
T ss_dssp EETTSSSCCEEEE-EECC--SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCC
T ss_pred EECCCCCCcEeEE-EecC--CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCc
Confidence 9985222122211 0000 011122222 56 45544433 5788999877443 4455432110 000 001
Q ss_pred eeEEEEe-CCeEEEEEEecCCcCeEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCC
Q 046579 278 HQYFGES-RGHLHLIEIYGPCTALFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREEN 356 (416)
Q Consensus 278 ~~~l~~~-~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (416)
..-+..+ ++..+++...+ .=.||..+-......+..+|+... ..+-.++..
T Consensus 300 va~i~~s~~~~~~vv~~~~----~g~v~~vd~~~~~~~~v~~i~~~~---------------------~~~d~~~~p--- 351 (567)
T 1qks_A 300 VAAILASHYRPEFIVNVKE----TGKILLVDYTDLNNLKTTEISAER---------------------FLHDGGLDG--- 351 (567)
T ss_dssp EEEEEECSSSSEEEEEETT----TTEEEEEETTCSSEEEEEEEECCS---------------------SEEEEEECT---
T ss_pred eEEEEEcCCCCEEEEEecC----CCeEEEEecCCCccceeeeeeccc---------------------cccCceECC---
Confidence 1122222 34445554422 124565553323333344442211 112344543
Q ss_pred CCCcEEEEe--eCCeEEEEEcCCCcEEEeeec
Q 046579 357 DDDSYLVLH--LPKKAVRYNLKDRTFKKLHDV 386 (416)
Q Consensus 357 ~~~~~i~l~--~~~~l~~ydl~~~~~~~v~~~ 386 (416)
++.++|+. ..+.+.++|.+++++...-++
T Consensus 352 -dgr~~~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 352 -SHRYFITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp -TSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred -CCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence 56777774 467999999999987655445
No 132
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=20.06 E-value=4.3e+02 Score=22.92 Aligned_cols=179 Identities=14% Similarity=0.095 Sum_probs=85.7
Q ss_pred CceEEEEccCCcceEe-cCCCCcCCCcceeeeeEEEEeCCCCCCCeEEEEEEecCCCCCCceEEEEEECCCCCeeec-cC
Q 046579 145 RRNYYVYNPTNKQYTI-LPRLHVDRGIFRSIFGVNLAFDPSKSAHYKVICVRNCDSLRDGHYQIEIYSSKTGPWRLS-GG 222 (416)
Q Consensus 145 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~l~~d~~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~-~~ 222 (416)
+..+.|||..+++... +...+. ....+.+.|. +.+-+ ..... -.+.+|+..++.=... ..
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~~~--------~~~~~~~spd--g~~l~--~g~~d------g~v~i~~~~~~~~~~~~~~ 162 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAGPV--------DAWTLAFSPD--SQYLA--TGTHV------GKVNIFGVESGKKEYSLDT 162 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECCTT--------CCCCEEECTT--SSEEE--EECTT------SEEEEEETTTCSEEEEEEC
T ss_pred CCcEEEEECCCCCEEEEEeCCCc--------cEEEEEECCC--CCEEE--EEcCC------CcEEEEEcCCCceeEEecC
Confidence 5678999998887653 222111 1112445553 33322 22221 1688888877653221 11
Q ss_pred CCccccccccCCcEEEccEEEE-EeeCCcEEEEEcCCceEe-ecCCCCCCCcccccceeEEEEe-CCeEEEEEEecCCcC
Q 046579 223 SFTAPSVINFRGGVFWNGAIHW-VSTHGSSLYFDVDQEKLR-EMPMPPIPDEWEERRHQYFGES-RGHLHLIEIYGPCTA 299 (416)
Q Consensus 223 ~~~~~~~~~~~~~v~~~G~lyw-~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~ 299 (416)
.... ...-...-+|.+.. -..++.|..+|+.+.+.. .+..... ....+.-. +|++.+.... ..
T Consensus 163 ~~~~----v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~-------~v~~l~~spd~~~l~s~s~---dg 228 (321)
T 3ow8_A 163 RGKF----ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM-------PIRSLTFSPDSQLLVTASD---DG 228 (321)
T ss_dssp SSSC----EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-------CCCEEEECTTSCEEEEECT---TS
T ss_pred CCce----EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCC-------ceeEEEEcCCCCEEEEEcC---CC
Confidence 0000 00000011343222 233467888999876543 2322111 11123333 6665544332 25
Q ss_pred eEEEEEEeCCCCCceEEEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE-eeCCeEEEEEcCCC
Q 046579 300 LFNVYEMKTDYSGWFVKYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL-HLPKKAVRYNLKDR 378 (416)
Q Consensus 300 ~l~iW~l~~~~~~W~~~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-~~~~~l~~ydl~~~ 378 (416)
.+.||.++.. .+..++.-. . ..+.-+++.. ++.+|+. ..++.+..||++++
T Consensus 229 ~i~iwd~~~~----~~~~~~~~h------~--------------~~v~~~~~sp----~~~~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 229 YIKIYDVQHA----NLAGTLSGH------A--------------SWVLNVAFCP----DDTHFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp CEEEEETTTC----CEEEEECCC------S--------------SCEEEEEECT----TSSEEEEEETTSCEEEEETTTT
T ss_pred eEEEEECCCc----ceeEEEcCC------C--------------CceEEEEECC----CCCEEEEEeCCCcEEEEeCCCC
Confidence 7999987642 223322100 0 2233455543 3545544 56789999999988
Q ss_pred cEEEe
Q 046579 379 TFKKL 383 (416)
Q Consensus 379 ~~~~v 383 (416)
+....
T Consensus 281 ~~~~~ 285 (321)
T 3ow8_A 281 TCVHT 285 (321)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 75443
No 133
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=20.05 E-value=4.6e+02 Score=23.19 Aligned_cols=108 Identities=10% Similarity=0.048 Sum_probs=56.6
Q ss_pred EccEEEEEeeCCcEEEEEcCCceEe-ecCCCCCCCcccccceeEEEEe-CCeEEEEEEecCCcCeEEEEEEeCCCCCceE
Q 046579 238 WNGAIHWVSTHGSSLYFDVDQEKLR-EMPMPPIPDEWEERRHQYFGES-RGHLHLIEIYGPCTALFNVYEMKTDYSGWFV 315 (416)
Q Consensus 238 ~~G~lyw~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~~l~iW~l~~~~~~W~~ 315 (416)
-+|.+.....++.|..+|+.+.+.. .+.... .....+.-. +|++.++...+ ..+.||.++....
T Consensus 216 ~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~---- 281 (425)
T 1r5m_A 216 DDDKFVIPGPKGAIFVYQITEKTPTGKLIGHH-------GPISVLEFNDTNKLLLSASDD---GTLRIWHGGNGNS---- 281 (425)
T ss_dssp ETTEEEEECGGGCEEEEETTCSSCSEEECCCS-------SCEEEEEEETTTTEEEEEETT---SCEEEECSSSBSC----
T ss_pred CCCEEEEEcCCCeEEEEEcCCCceeeeeccCC-------CceEEEEECCCCCEEEEEcCC---CEEEEEECCCCcc----
Confidence 3556555555678999999875432 222111 111223333 56655544333 5799998774321
Q ss_pred EEEEcccccccccccchhccCCCCCCceeeeEEEEeecCCCCCCcEEEE-eeCCeEEEEEcCCCcEEEee
Q 046579 316 KYRVDLGGVTYVFPEMIRTYLDPEDLHYYGYSILCVVREENDDDSYLVL-HLPKKAVRYNLKDRTFKKLH 384 (416)
Q Consensus 316 ~~~i~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-~~~~~l~~ydl~~~~~~~v~ 384 (416)
...+... . ..+.-+++.. ++ .++. ..++.+..||+++++.....
T Consensus 282 ~~~~~~~------~--------------~~i~~~~~~~----~~-~l~~~~~d~~i~i~d~~~~~~~~~~ 326 (425)
T 1r5m_A 282 QNCFYGH------S--------------QSIVSASWVG----DD-KVISCSMDGSVRLWSLKQNTLLALS 326 (425)
T ss_dssp SEEECCC------S--------------SCEEEEEEET----TT-EEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEecCC------C--------------ccEEEEEECC----CC-EEEEEeCCCcEEEEECCCCcEeEec
Confidence 1111100 0 2233445543 34 4443 56789999999988765544
Done!