BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046582
(381 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VCH|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VG8|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
Length = 480
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 158/389 (40%), Gaps = 47/389 (12%)
Query: 15 ISEASQFHFLLLPFLAQGHLIPMIDIA-RLLAQHGAIVTIVTT----PVNAARFKTVLAR 69
+ E+ H ++P GHLIP+++ A RL+ HG VT V P A R TVL
Sbjct: 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQR--TVLDS 58
Query: 70 ATQSGLQIRLTEIQFPWKEAGLPEGCENIDMLPSIDLASKFFNSLSMLQLPFENLFK--- 126
S + L + D+ S + S+ +++ +F
Sbjct: 59 LPSSISSVFLPPVDL-------------TDLSSSTRIESRISLTVTRSNPELRKVFDSFV 105
Query: 127 EQTPKPCCIISDMGHPWTVDTAAKFNVPRIIFHGFSCFCLLCMNLLRDSKVHENVASDSE 186
E P ++ D+ D A +F+VP IF+ + L L K+ E V+ +
Sbjct: 106 EGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSF--FLHLPKLDETVSCEFR 163
Query: 187 YFNIP-GLPDHIGFTRVQIPIPTHKR-DDKKELREKIWAAEKKTYGAIINTFEEIESAFV 244
P LP + P R DD + K+ G ++NTF E+E +
Sbjct: 164 ELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAI 223
Query: 245 EGCKKGKQGK--VWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCL 302
+ ++ K V+ +GP+ K+ + E ECL WLD+Q SV+YV
Sbjct: 224 KALQEPGLDKPPVYPVGPLVNIGKQEAKQTEES--------ECLKWLDNQPLGSVLYVSF 275
Query: 303 GSICNLKSSQLIELGLGLEASKKPFIWVTRVGSKXXXXXXXXXXXXXX----------XR 352
GS L QL EL LGL S++ F+WV R S R
Sbjct: 276 GSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLER 335
Query: 353 IKGTGLLIRGWAPQVMILSHPAVGGFLTH 381
K G +I WAPQ +L+HP+ GGFLTH
Sbjct: 336 TKKRGFVIPFWAPQAQVLAHPSTGGFLTH 364
>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights
Into The Structural Basis Of A Multifunctional (Iso)
Flavonoid Glycosyltransferase
Length = 482
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 163/397 (41%), Gaps = 65/397 (16%)
Query: 22 HFLLLPFLAQGHLIPMIDIARLLAQHGAIVTIVTTPVNAARFKTVLARATQSGLQIRLTE 81
H +++P+ QGH+ P+ +A+LL G +T V T N R G T+
Sbjct: 10 HVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGF----TD 65
Query: 82 IQFPWKEAGL-------------PEGCENID---MLPSIDLASKFFNSLSMLQLPFENLF 125
F GL P C+++ + P +L ++ +S ++
Sbjct: 66 FNFESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNV--------- 116
Query: 126 KEQTPKPCCIISDMGHPWTVDTAAKFNVPRIIFHGFSCFCLLCMNLLR-----------D 174
P C++SD +T+ A +F +P +++ S LL + R D
Sbjct: 117 ----PPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKD 172
Query: 175 SKVHENVASDSEYFNIPGLP-----DHIGFTRVQIPIPTHKRDDKKELREKIWAAEKKTY 229
N +++ IPGL D + F R T+ D E ++ K
Sbjct: 173 ESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRT-----TNPNDIMLEFFIEVADRVNKDT 227
Query: 230 GAIINTFEEIESAFVEGCKKGKQGKVWCIGPVSLCNKES-----IDKVERGNKAAIDVPE 284
++NTF E+ES + ++ IGP+ K++ +D ++ N D E
Sbjct: 228 TILLNTFNELESDVINALSSTIPS-IYPIGPLPSLLKQTPQIHQLDSLD-SNLWKEDT-E 284
Query: 285 CLTWLDSQQPSSVVYVCLGSICNLKSSQLIELGLGLEASKKPFIWVTRVGSKXXXXXXXX 344
CL WL+S++P SVVYV GS + QL+E GL KK F+W+ R
Sbjct: 285 CLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFS 344
Query: 345 XXXXXXXRIKGTGLLIRGWAPQVMILSHPAVGGFLTH 381
+G LI W PQ +L+HP++GGFLTH
Sbjct: 345 SEFTNEIADRG---LIASWCPQDKVLNHPSIGGFLTH 378
>pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
pdb|2ACW|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
Length = 465
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 160/377 (42%), Gaps = 47/377 (12%)
Query: 22 HFLLLPFLAQGHLIPMIDIARLLAQHGAIVTIVT-------TPVNAARFKTVLARATQSG 74
+ +P GHL ++ A+LL H + I P + K+VLA Q
Sbjct: 11 ELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQ 70
Query: 75 LQIRLTEIQFPWKEAGLPEGCENIDMLPSIDLASKFFNSLSMLQ--LPF--ENLFKEQTP 130
L I L E++ P +E L S F L+ L+ +P + +
Sbjct: 71 L-IDLPEVEPPPQEL----------------LKSPEFYILTFLESLIPHVKATIKTILSN 113
Query: 131 KPCCIISDMGHPWTVDTAAKFNVPRIIFHGFSCFCLLCMNLLRDSKVHE---NVASDSEY 187
K ++ D +D +F +P +F + L M L++ ++ E + D +
Sbjct: 114 KVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQL 173
Query: 188 FNIPGLPDHIGFTRVQIPIPTHKRDDKKELREKIWAAEKKTYGAIINTFEEIESAFVEGC 247
NIPG+ + + +P +D K+ + T G I+NTF ++E + ++
Sbjct: 174 LNIPGISNQV--PSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDAL 231
Query: 248 KKGKQG--KVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSI 305
+ ++ +GP+ + K+++ I L WLD Q SVV++C GS+
Sbjct: 232 YDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLI-----LKWLDEQPDKSVVFLCFGSM 286
Query: 306 -CNLKSSQLIELGLGLEASKKPFIWVTRVGSKXXXXXXXXXXXXXXXRIKGTGLLIRGWA 364
+ SQ+ E+ LGL+ S F+W K ++G G+ I GWA
Sbjct: 287 GVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWM-----ELEGKGM-ICGWA 340
Query: 365 PQVMILSHPAVGGFLTH 381
PQV +L+H A+GGF++H
Sbjct: 341 PQVEVLAHKAIGGFVSH 357
>pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
pdb|2ACV|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1
Length = 463
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 160/377 (42%), Gaps = 47/377 (12%)
Query: 22 HFLLLPFLAQGHLIPMIDIARLLAQHGAIVTIVT-------TPVNAARFKTVLARATQSG 74
+ +P GHL ++ A+LL H + I P + K+VLA Q
Sbjct: 11 ELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQ 70
Query: 75 LQIRLTEIQFPWKEAGLPEGCENIDMLPSIDLASKFFNSLSMLQ--LPF--ENLFKEQTP 130
L I L E++ P +E L S F L+ L+ +P + +
Sbjct: 71 L-IDLPEVEPPPQEL----------------LKSPEFYILTFLESLIPHVKATIKTILSN 113
Query: 131 KPCCIISDMGHPWTVDTAAKFNVPRIIFHGFSCFCLLCMNLLRDSKVHE---NVASDSEY 187
K ++ D +D +F +P +F + L M L++ ++ E + D +
Sbjct: 114 KVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQL 173
Query: 188 FNIPGLPDHIGFTRVQIPIPTHKRDDKKELREKIWAAEKKTYGAIINTFEEIESAFVEGC 247
NIPG+ + + +P +D K+ + T G I+NTF ++E + ++
Sbjct: 174 LNIPGISNQV--PSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDAL 231
Query: 248 KKGKQG--KVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSI 305
+ ++ +GP+ + K+++ I L WLD Q SVV++C GS+
Sbjct: 232 YDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLI-----LKWLDEQPDKSVVFLCFGSM 286
Query: 306 -CNLKSSQLIELGLGLEASKKPFIWVTRVGSKXXXXXXXXXXXXXXXRIKGTGLLIRGWA 364
+ SQ+ E+ LGL+ S F+W K ++G G+ I GWA
Sbjct: 287 GVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWM-----ELEGKGM-ICGWA 340
Query: 365 PQVMILSHPAVGGFLTH 381
PQV +L+H A+GGF++H
Sbjct: 341 PQVEVLAHKAIGGFVSH 357
>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C1Z|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C9Z|A Chain A, Structure And Activity Of A Flavonoid 3-0
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
Length = 456
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 227 KTYGAIINTFEEIESAFVEGCKKGKQGKVWCIGPVSLCNKESIDKVERGNKAAIDVPECL 286
K IN+FEE++ + K K IGP +L + G CL
Sbjct: 213 KATAVFINSFEELDDSLTNDLKS-KLKTYLNIGPFNLITPPPVVPNTTG---------CL 262
Query: 287 TWLDSQQPSSVVYVCLGSICNLKSSQLIELGLGLEASKKPFIWVTRVGSKXXXXXXXXXX 346
WL ++P+SVVY+ G++ ++++ L LEAS+ PFIW R ++
Sbjct: 263 QWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKAR------VHLP 316
Query: 347 XXXXXRIKGTGLLIRGWAPQVMILSHPAVGGFLTH 381
+ +G G+++ WAPQ +L+H AVG F+TH
Sbjct: 317 EGFLEKTRGYGMVVP-WAPQAEVLAHEAVGAFVTH 350
>pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp
pdb|3HBJ|A Chain A, Structure Of Ugt78g1 Complexed With Udp
Length = 454
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 139/370 (37%), Gaps = 40/370 (10%)
Query: 21 FHFLLLPFLAQGHLIPMIDIARLLAQHGAIVTIVTTPVNAARFKTVLARATQSGLQIRLT 80
H +L F H P++ + + +A VT T+ +R+ + L
Sbjct: 14 LHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTN-DTLFSRSNE-----FLP 67
Query: 81 EIQFPWKEAGLPEGCENIDMLPSIDLASKFFNSLSMLQLPFENLFKEQTPKP----CCII 136
I++ GLP+G + S + F + +Q F+++ E + C++
Sbjct: 68 NIKYYNVHDGLPKG-----YVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLV 122
Query: 137 SDMGHPWTVDTAAKFN---VPRIIFHGFSCFCLLCMNLLRDSKVHENVASDSEYFNIPGL 193
+D + D A + + VP S + +L+R+ + V +PG
Sbjct: 123 TDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVHDVKSIDVLPGF 182
Query: 194 PDHIGFTRVQIPIPTHKRDDK--KELREKIWAAEKKTYGAIINTFEEIESAFVEGCKKGK 251
P+ +P K D + K+ + IN+F I +E K
Sbjct: 183 PE---LKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIH-PLIENELNSK 238
Query: 252 QGKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNLKSS 311
+ +GP +L + E G CL WLD + SSVVY+ GS+
Sbjct: 239 FKLLLNVGPFNLTTPQRKVSDEHG---------CLEWLDQHENSSVVYISFGSVVTPPPH 289
Query: 312 QLIELGLGLEASKKPFIWVTRVGSKXXXXXXXXXXXXXXXRIKGTGLLIRGWAPQVMILS 371
+L L LE PFIW R K R K G ++ WAPQV IL
Sbjct: 290 ELTALAESLEECGFPFIWSFRGDPK------EKLPKGFLERTKTKGKIV-AWAPQVEILK 342
Query: 372 HPAVGGFLTH 381
H +VG FLTH
Sbjct: 343 HSSVGVFLTH 352
>pdb|3GB5|A Chain A, Crystal Structure Of Mus Musculus Iodotyrosine Deiodinase
(Iyd) Bound To Fmn
pdb|3GFD|A Chain A, Crystal Structure Of Mus Musculus Iodotyrosine Deiodinase
(Iyd) Bound To Fmn And Mono-Iodotyrosine (Mit)
pdb|3GFD|B Chain B, Crystal Structure Of Mus Musculus Iodotyrosine Deiodinase
(Iyd) Bound To Fmn And Mono-Iodotyrosine (Mit)
pdb|3GH8|A Chain A, Crystal Structure Of Mus Musculus Iodotyrosine Deiodinase
(Iyd) Bound To Fmn And Di-Iodotyrosine (Dit)
pdb|3GH8|B Chain B, Crystal Structure Of Mus Musculus Iodotyrosine Deiodinase
(Iyd) Bound To Fmn And Di-Iodotyrosine (Dit)
pdb|3GH8|C Chain C, Crystal Structure Of Mus Musculus Iodotyrosine Deiodinase
(Iyd) Bound To Fmn And Di-Iodotyrosine (Dit)
pdb|3GH8|D Chain D, Crystal Structure Of Mus Musculus Iodotyrosine Deiodinase
(Iyd) Bound To Fmn And Di-Iodotyrosine (Dit)
pdb|3GH8|E Chain E, Crystal Structure Of Mus Musculus Iodotyrosine Deiodinase
(Iyd) Bound To Fmn And Di-Iodotyrosine (Dit)
pdb|3GH8|F Chain F, Crystal Structure Of Mus Musculus Iodotyrosine Deiodinase
(Iyd) Bound To Fmn And Di-Iodotyrosine (Dit)
pdb|3GH8|G Chain G, Crystal Structure Of Mus Musculus Iodotyrosine Deiodinase
(Iyd) Bound To Fmn And Di-Iodotyrosine (Dit)
pdb|3GH8|H Chain H, Crystal Structure Of Mus Musculus Iodotyrosine Deiodinase
(Iyd) Bound To Fmn And Di-Iodotyrosine (Dit)
Length = 259
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 46 QHGAIVTIVTTPVN-AARFKTVLARATQSGLQIRLTEIQFPWKEAGLPE 93
Q+ +VT+ TTP+N R + +L R + L + L + +P ++A +P+
Sbjct: 193 QNAGLVTVTTTPLNCGPRLRVLLGRPSHEKLLV-LLPVGYPSRDATVPD 240
>pdb|3IA7|A Chain A, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
pdb|3IA7|B Chain B, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
Length = 402
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 20 QFHFLLLPFLAQGHLIPMIDIARLLAQHGAIVTIVTTPVNAARFKTVLA 68
Q H L GH+ P + + LA+ G +T VTTP+ A K A
Sbjct: 4 QRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAGA 52
>pdb|3TNZ|A Chain A, Crystal Structure Of Mus Musculus Iodotyrosine Deiodinase
(Iyd) C217a, C239a Bound To Fmn And Mono-Iodotyrosine
(Mit)
pdb|3TNZ|B Chain B, Crystal Structure Of Mus Musculus Iodotyrosine Deiodinase
(Iyd) C217a, C239a Bound To Fmn And Mono-Iodotyrosine
(Mit)
pdb|3TO0|A Chain A, Crystal Structure Of Mus Musculus Iodotyrosine Deiodinase
(Iyd) C217a, C239a Bound To Fmn
pdb|3TO0|B Chain B, Crystal Structure Of Mus Musculus Iodotyrosine Deiodinase
(Iyd) C217a, C239a Bound To Fmn
Length = 259
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 51 VTIVTTPVNAA-RFKTVLARATQSGLQIRLTEIQFPWKEAGLPE 93
VT+ TTP+NA R + +L R + L + L + +P ++A +P+
Sbjct: 198 VTVTTTPLNAGPRLRVLLGRPSHEKLLV-LLPVGYPSRDATVPD 240
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,539,583
Number of Sequences: 62578
Number of extensions: 415083
Number of successful extensions: 1171
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1150
Number of HSP's gapped (non-prelim): 12
length of query: 381
length of database: 14,973,337
effective HSP length: 101
effective length of query: 280
effective length of database: 8,652,959
effective search space: 2422828520
effective search space used: 2422828520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)