BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046583
MEDINDRNIVIIETTTDHPLSPEVFNRMFVFLYDTAYAFKTRCRKLITIDGWEIDGPYKS
VMLVAVCRDGNDAVLPIAFCEVQEENLDSWAFFLTNLTYGLRFERGEGLCILADGDNGVD
EAVEEFLPYAVYRQCCFSLYGRMVGKFPDVGVHSAFWGACRSTDRKNFIYHMSIIETVNI
ECHNWLKDTDTKTWALFSMPQWVKSTEVTKSSSEQLRIWLSKFLDLNVAQRYTTITRTIA
EMFQRRYLAGWEWVYDKITPTARQQIIHNVFQSDGWNVDVPSNNAVSFVSRHGFVFEVNR
ELMTCSCRLWQLSGIPCEHACRCIHSWADKLDKYVHRLWSVDEYRSAYGPGMQMLREITH
WEWQTKANVLPPMKNSTNSSGSNEANCHSKVTTLNDLFPY

High Scoring Gene Products

Symbol, full name Information P value
AT1G49920 protein from Arabidopsis thaliana 9.4e-11
AT1G64260 protein from Arabidopsis thaliana 1.1e-10
AT1G64255 protein from Arabidopsis thaliana 4.4e-08

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046583
        (400 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2197122 - symbol:AT1G49920 "AT1G49920" species...   182  9.4e-11   1
TAIR|locus:2014230 - symbol:AT1G64260 "AT1G64260" species...   181  1.1e-10   1
TAIR|locus:1006230722 - symbol:AT1G64255 species:3702 "Ar...   145  4.4e-08   2


>TAIR|locus:2197122 [details] [associations]
            symbol:AT1G49920 "AT1G49920" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434
            PROSITE:PS50966 SMART:SM00575 InterPro:IPR004332 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0008270 InterPro:IPR018289
            Pfam:PF10551 Pfam:PF03108 EMBL:AC074110 IPI:IPI00531525
            RefSeq:NP_175414.1 UniGene:At.52103 EnsemblPlants:AT1G49920.1
            GeneID:841415 KEGG:ath:AT1G49920 TAIR:At1g49920 eggNOG:NOG303426
            HOGENOM:HOG000152182 InParanoid:Q9C702 OMA:ISESHTC PhylomeDB:Q9C702
            ProtClustDB:CLSN2682695 Genevestigator:Q9C702 Uniprot:Q9C702
        Length = 785

 Score = 182 (69.1 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 51/206 (24%), Positives = 92/206 (44%)

Query:     1 MEDINDRNIVIIETTTD---HPLSPEVFNRMFVFLYDTAYAFKTRCRKLITIDGWEIDGP 57
             M  ++  N ++++   D   H      F  +F     +   F+  CR LI +D   + G 
Sbjct:   334 MSVLHSSNGLLVDWQYDSLTHDPEHASFRGLFWAFSQSIQGFQ-HCRPLIVVDTKNLGGK 392

Query:    58 YKSVMLVAVCRDGNDAVLPIAFCEVQEENLDSWAFFLTNLTYGLRFERGEGLCILADGDN 117
             YK  +++A   D  +   P+AF   +E ++DSW +FLT +    +  + +G+C+++  D 
Sbjct:   393 YKMKLMIASAFDATNQYFPLAFAVTKEVSVDSWRWFLTRIRE--KVTQRQGICLISSPDP 450

Query:   118 GVDEAVEE-----FLPYAVYRQCCFSLYGRMVGKFP--DVGVHSAFWGACRSTDRKNFIY 170
              +   + E       P+A +R C + L  ++    P  D  +H     A  S+ ++ F  
Sbjct:   451 DILAVINEPGSQWKEPWAYHRFCLYHLCSKLCSVSPGFDYNMHFLVDEAGSSSQKEEFDS 510

Query:   171 HMSIIETVNIECHNWLKDTDTKTWAL 196
             +M  I+  N E   WL       WAL
Sbjct:   511 YMKEIKERNPEAWKWLDQFPPHQWAL 536


>TAIR|locus:2014230 [details] [associations]
            symbol:AT1G64260 "AT1G64260" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434
            PROSITE:PS50966 SMART:SM00575 InterPro:IPR004332 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0008270 EMBL:AC066689
            InterPro:IPR018289 Pfam:PF10551 Pfam:PF03108 eggNOG:NOG303426
            HOGENOM:HOG000152182 ProtClustDB:CLSN2682695 IPI:IPI00526445
            RefSeq:NP_176608.2 UniGene:At.66093 EnsemblPlants:AT1G64260.1
            GeneID:842731 KEGG:ath:AT1G64260 TAIR:At1g64260 InParanoid:Q9C7V1
            OMA:HDHELGL PhylomeDB:Q9C7V1 Genevestigator:Q9C7V1 Uniprot:Q9C7V1
        Length = 719

 Score = 181 (68.8 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 75/356 (21%), Positives = 148/356 (41%)

Query:    43 CRKLITIDGWEIDGPYKSVMLVAVCRDGNDAVLPIAFCEVQEENLDSWAFFLTNLTYGLR 102
             CR LI +D   ++G Y+  +++A   D  +   P+AF   +E + DSW +F T +    +
Sbjct:   375 CRPLIVVDTKSLNGKYQLKLMIASGVDAANKFFPLAFAVTKEVSTDSWRWFFTKIRE--K 432

Query:   103 FERGEGLCILADGDNGVDEAVEE--FL---PYAVYRQCCFSLYGRMVGKFPDVGVHSAFW 157
               + + LC+++     +   V E   L   P+A ++ C   L  + +G F D  + S   
Sbjct:   433 VTQRKDLCLISSPLRDIVAVVNEPGSLWQEPWAHHKFCLNHLRSQFLGVFRDYNLESLVE 492

Query:   158 GACRSTDRKNFIYHMSIIETVNIECHNWLKDTDTKTWALFSMPQWVKSTEVTKSSSEQLR 217
              A  +  ++ F  +M+ I+  N E   WL       WAL +    ++   + +   E L 
Sbjct:   493 QAGSTNQKEEFDSYMNDIKEKNPEAWKWLDQIPRHKWAL-AHDSGLRYG-IIEIDREALF 550

Query:   218 IWLSKFLDLNVA----------QRYTTITRTIAEMFQ--RRYLAGWEWVYDKITPTARQQ 265
                  F    VA          +  ++  ++++ ++    R +   E   DK+       
Sbjct:   551 AVCRGFPYCTVAMTGGVMLMFDELRSSFDKSLSSIYSSLNRGVVYTEPFMDKLEEFMTDS 610

Query:   266 IIHNVFQSDGWNVDVPSNNAVSFVSRHGFVFEVNRELMTCSCRLWQLSGIPCEHACRCIH 325
             I + + Q +  +  V  ++      +  ++ ++N  + TC+CR +Q    PC HA     
Sbjct:   611 IPYVITQLERDSFKVSESS-----EKEEWIVQLN--VSTCTCRKFQSYKFPCLHALAVFE 663

Query:   326 SWADKLDKYVHRLWSVDEYRSAYGPGMQMLREITHWEWQTKANVL-PPMKN-STNS 379
                    +YV   ++V++Y   Y      + ++  W    +   L PP +  S N+
Sbjct:   664 KLKINPLQYVDECYTVEQYCKTYAATFSPVPDVAAWPEDCRVPTLFPPSQQLSPNT 719


>TAIR|locus:1006230722 [details] [associations]
            symbol:AT1G64255 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434
            PROSITE:PS50966 SMART:SM00575 InterPro:IPR004332 EMBL:CP002684
            GO:GO:0008270 InterPro:IPR018289 Pfam:PF10551 Pfam:PF03108
            IPI:IPI00538919 RefSeq:NP_974088.1 UniGene:At.66092 PRIDE:F4I6P0
            EnsemblPlants:AT1G64255.1 GeneID:2745850 KEGG:ath:AT1G64255
            OMA:ECHELPI Uniprot:F4I6P0
        Length = 750

 Score = 145 (56.1 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
 Identities = 39/159 (24%), Positives = 71/159 (44%)

Query:    43 CRKLITIDGWEIDGPYKSVMLVAVCRDGNDAVLPIAFCEVQEENLDSWAFFLTNLTYGLR 102
             CR LI +D   ++  Y+  +++A   D  +   P+AF   +E + D W +FLT +    +
Sbjct:   382 CRPLIVVDTKNLNCEYQLKLMIASGVDAANKYFPLAFAVTKEVSTDIWRWFLTGIRE--K 439

Query:   103 FERGEGLCILADGDNGVDEAVEEF-----LPYAVYRQCCFSLYGRMVGKFPDVGVHSAFW 157
               + +GLC+++     +   V E       P+A +R      Y +    FP   + +   
Sbjct:   440 VTQRKGLCLISSPHPDIIAVVNESGSQWQEPWAYHRFSLNHFYSQFSRVFPSFCLGARIR 499

Query:   158 GACRSTDRKNFIYHMSIIETVNIECHNWLKDTDTKTWAL 196
              A  ++ +  F+ +M+ I+  N E   WL       WAL
Sbjct:   500 RAGSTSQKDEFVSYMNDIKEKNPEARKWLDQFPQNRWAL 538

 Score = 58 (25.5 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
 Identities = 16/71 (22%), Positives = 30/71 (42%)

Query:   304 TCSCRLWQLSGIPCEHACRCIHSWADKLDKYVHRLWSVDEYRSAYGPGMQMLREITHW-E 362
             +C+C  +Q    PC HA            +YV   ++++  +  Y      + E++ W E
Sbjct:   651 SCTCGDFQRYKFPCLHALAVCKKLKFNPLQYVDDCYTLERLKRTYATIFSHVPEMSAWPE 710

Query:   363 WQTKANVLPPM 373
                   +LPP+
Sbjct:   711 ASGVPRLLPPV 721


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.136   0.448    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      400       400   0.00098  117 3  11 22  0.49    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  625 (66 KB)
  Total size of DFA:  323 KB (2162 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  33.37u 0.15s 33.52t   Elapsed:  00:00:01
  Total cpu time:  33.37u 0.16s 33.53t   Elapsed:  00:00:01
  Start:  Mon May 20 18:38:47 2013   End:  Mon May 20 18:38:48 2013

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