BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046589
(729 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 163/511 (31%), Positives = 229/511 (44%), Gaps = 51/511 (9%)
Query: 123 PLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETL 182
P L D S L+ L++S N L G S +S LK+L++ NQ G +P L L+ L
Sbjct: 214 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYL 271
Query: 183 SLCSNSFTGEMPSEL-GDMKQLKSLDFSGNGFNGTVPIRLGELTRXXXXXXXXXXXXXXX 241
SL N FTGE+P L G L LD SGN F G VP G +
Sbjct: 272 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGEL 331
Query: 242 TVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKK-LSDHYLGINQFTGSIQSELGNCKNF 300
+ ++ L LD+S N SG +P +++L L L N F+G I L C+N
Sbjct: 332 PMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL--CQNP 389
Query: 301 KSVLAEL-------------------QIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNN 341
K+ L EL ++ + N LSG +PS LG +++ + L N
Sbjct: 390 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLN 449
Query: 342 QFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGR 401
G IP E+ L+ + L N L+G IP L++ +L I+L N L+G I GR
Sbjct: 450 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR 509
Query: 402 CTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRL----GDSTXXX 457
NL+ L+ LS+N +G IP E+G+ RS+ L LN+N FNG+IP + G
Sbjct: 510 LENLAILK---LSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 566
Query: 458 XXXXXXXXXXXXXPEKIADLAQ--LQFLDLSYNNLSRPILSKH------SSYFHEVNIPD 509
+K A L+F + L+R LS S + P
Sbjct: 567 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNR--LSTRNPCNITSRVYGGHTSPT 624
Query: 510 LSYSHNYRKFDLSYNMLSGPIPKELGSCVVV---------LTGYIPRSLGHLSCSVKLNL 560
+ + D+SYNMLSG IPKE+GS + ++G IP +G L L+L
Sbjct: 625 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDL 684
Query: 561 SGNKLSVLVPTSFGNLNGLTNLDLSYNEFDG 591
S NKL +P + L LT +DLS N G
Sbjct: 685 SSNKLDGRIPQAMSALTMLTEIDLSNNNLSG 715
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 176/387 (45%), Gaps = 45/387 (11%)
Query: 112 LRTQSLKGPVSPLLFDLSK--LRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSL 169
L + + GP+ P L K L+ L L N G+ P +SN L L L N LSG++
Sbjct: 372 LSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTI 431
Query: 170 PSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRXXX 229
PS LG L+ L L L N GE+P EL +K L++L N G +P
Sbjct: 432 PSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIP----------- 480
Query: 230 XXXXXXXXXXXXTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGS 289
S +N +L+++ +SNN L+G IP I L+ L+ L N F+G+
Sbjct: 481 --------------SGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 526
Query: 290 IQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPL 349
I +ELG+C++ L L + T N +G +P+ + K +S + N G+ +
Sbjct: 527 IPAELGDCRS----LIWLDLNT-----NLFNGTIPAAMFK----QSGKIAANFIAGKRYV 573
Query: 350 EVGNCSMLKYIRLSNN--KLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQ 407
+ N M K + N + G +LN + N+ + G F N
Sbjct: 574 YIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF---DNNGS 630
Query: 408 LEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTXXXXXXXXXXXXX 467
+ LD+S NML+G IPKEIG++ + IL L N +GSIP +GD
Sbjct: 631 MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLD 690
Query: 468 XXXPEKIADLAQLQFLDLSYNNLSRPI 494
P+ ++ L L +DLS NNLS PI
Sbjct: 691 GRIPQAMSALTMLTEIDLSNNNLSGPI 717
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 155/351 (44%), Gaps = 45/351 (12%)
Query: 112 LRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPS 171
L+ G + P L + S+L L+LS N L G + +L +L+ L L N L G +P
Sbjct: 398 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 457
Query: 172 QLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRXXXXX 231
+L + LETL L N TGE+PS L + L + S N G +P +G
Sbjct: 458 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR-------- 509
Query: 232 XXXXXXXXXXTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQ 291
L++L+ L +SNN SGNIP E+ + L L N F G+I
Sbjct: 510 -----------------LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Query: 292 SELGN-----CKNFKSVLAELQIFTFSAGMN----------QLSGPLPSWLGKWNQMESV 336
+ + NF + + ++ + GM + G L + +
Sbjct: 553 AAMFKQSGKIAANF--IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPC 610
Query: 337 WLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIE 396
+ + + G N + ++ +S N LSG IP+E+ L +NL N +SG+I
Sbjct: 611 NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 670
Query: 397 DVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIP 447
D G +L L LDLSSN L GRIP+ + L + + L++N +G IP
Sbjct: 671 DEVG---DLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 147/505 (29%), Positives = 219/505 (43%), Gaps = 84/505 (16%)
Query: 112 LRTQSLKGPVSPL--LFDLSKLRVLNLSQNLL-FGQPSPQVSNLKRLKMLSLGENQLSGS 168
L SL GPV+ L L S L+ LN+S N L F L L++L L N +SG+
Sbjct: 104 LSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGA 163
Query: 169 LPSQLGVLTW--------LETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIR 220
V+ W L+ L++ N +G++ ++ L+ LD S N F+ +P
Sbjct: 164 -----NVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF- 215
Query: 221 LGELTRXXXXXXXXXXXXXXXTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHY 280
LG+ + + ++ T L L++S+N G IPP LK L
Sbjct: 216 LGDCSALQHLDISGNKLSGDFSRAIST-CTELKLLNISSNQFVGPIPPL--PLKSLQYLS 272
Query: 281 LGINQFTGSIQSEL-GNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLN 339
L N+FTG I L G C + N G +P + G + +ES+ L+
Sbjct: 273 LAENKFTGEIPDFLSGACDTLTGL---------DLSGNHFYGAVPPFFGSCSLLESLALS 323
Query: 340 NNQFIGRIPLE-VGNCSMLKYIRLSNNKLSGSIPREL-NDSESLVEINLDGNMLSGTIED 397
+N F G +P++ + LK + LS N+ SG +P L N S SL+ ++L N SG I
Sbjct: 324 SNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI-- 381
Query: 398 VFGRCTN-LSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTXX 456
+ C N + L++L L +N TG+IP + N + L L+ N+ +G+IP LG
Sbjct: 382 LPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGS---- 437
Query: 457 XXXXXXXXXXXXXXPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIP-DLSYSHN 515
L++L+ L L N L E IP +L Y
Sbjct: 438 --------------------LSKLRDLKLWLNML-------------EGEIPQELMYVKT 464
Query: 516 YRKFDLSYNMLSGPIPKELGSCVVV---------LTGYIPRSLGHLSCSVKLNLSGNKLS 566
L +N L+G IP L +C + LTG IP+ +G L L LS N S
Sbjct: 465 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 524
Query: 567 VLVPTSFGNLNGLTNLDLSYNEFDG 591
+P G+ L LDL+ N F+G
Sbjct: 525 GNIPAELGDCRSLIWLDLNTNLFNG 549
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 155/337 (45%), Gaps = 42/337 (12%)
Query: 117 LKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVL 176
L G + L LSKLR L L N+L G+ ++ +K L+ L L N L+G +PS L
Sbjct: 427 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNC 486
Query: 177 TWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRXXXXXXXXXX 236
T L +SL +N TGE+P +G ++ L L S N F+G +P LG+
Sbjct: 487 TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC------------ 534
Query: 237 XXXXXTVSLFTNLQSLSYLDVSNNLLSGNIPPEI-SHLKKLSDHYLGINQFT----GSIQ 291
+SL +LD++ NL +G IP + K++ +++ ++ ++
Sbjct: 535 -------------RSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMK 581
Query: 292 SEL---GNCKNFKSVLAE-LQIFTFSAGMNQLS----GPLPSWLGKWNQMESVWLNNNQF 343
E GN F+ + +E L + N S G M + ++ N
Sbjct: 582 KECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNML 641
Query: 344 IGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCT 403
G IP E+G+ L + L +N +SGSIP E+ D L ++L N L G I +
Sbjct: 642 SGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAM---S 698
Query: 404 NLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSN 440
L+ L ++DLS+N L+G IP E+G + K +N
Sbjct: 699 ALTMLTEIDLSNNNLSGPIP-EMGQFETFPPAKFLNN 734
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 118/287 (41%), Gaps = 60/287 (20%)
Query: 111 VLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLP 170
+L L G + L + + L ++LS N L G+ + L+ L +L L N SG++P
Sbjct: 469 ILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 528
Query: 171 SQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDF--------------------SG 210
++LG L L L +N F G +P+ + + +F +G
Sbjct: 529 AELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAG 588
Query: 211 N--GFNGTVPIRLGELTRXXXX--XXXXXXXXXXXTVSLFTNLQSLSYLDVSNNLLSGNI 266
N F G IR +L R T F N S+ +LD+S N+LSG I
Sbjct: 589 NLLEFQG---IRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYI 645
Query: 267 PPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSW 326
P EI + L LG N +GSI E+G+ + G+N L
Sbjct: 646 PKEIGSMPYLFILNLGHNDISGSIPDEVGDLR----------------GLNILD------ 683
Query: 327 LGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPR 373
L++N+ GRIP + +ML I LSNN LSG IP
Sbjct: 684 -----------LSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 719
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 163/511 (31%), Positives = 229/511 (44%), Gaps = 51/511 (9%)
Query: 123 PLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETL 182
P L D S L+ L++S N L G S +S LK+L++ NQ G +P L L+ L
Sbjct: 217 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYL 274
Query: 183 SLCSNSFTGEMPSEL-GDMKQLKSLDFSGNGFNGTVPIRLGELTRXXXXXXXXXXXXXXX 241
SL N FTGE+P L G L LD SGN F G VP G +
Sbjct: 275 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGEL 334
Query: 242 TVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLK-KLSDHYLGINQFTGSIQSELGNCKNF 300
+ ++ L LD+S N SG +P +++L L L N F+G I L C+N
Sbjct: 335 PMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL--CQNP 392
Query: 301 KSVLAEL-------------------QIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNN 341
K+ L EL ++ + N LSG +PS LG +++ + L N
Sbjct: 393 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLN 452
Query: 342 QFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGR 401
G IP E+ L+ + L N L+G IP L++ +L I+L N L+G I GR
Sbjct: 453 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR 512
Query: 402 CTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRL----GDSTXXX 457
NL+ L+ LS+N +G IP E+G+ RS+ L LN+N FNG+IP + G
Sbjct: 513 LENLAILK---LSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 569
Query: 458 XXXXXXXXXXXXXPEKIADLAQ--LQFLDLSYNNLSRPILSKH------SSYFHEVNIPD 509
+K A L+F + L+R LS S + P
Sbjct: 570 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNR--LSTRNPCNITSRVYGGHTSPT 627
Query: 510 LSYSHNYRKFDLSYNMLSGPIPKELGSCVVV---------LTGYIPRSLGHLSCSVKLNL 560
+ + D+SYNMLSG IPKE+GS + ++G IP +G L L+L
Sbjct: 628 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDL 687
Query: 561 SGNKLSVLVPTSFGNLNGLTNLDLSYNEFDG 591
S NKL +P + L LT +DLS N G
Sbjct: 688 SSNKLDGRIPQAMSALTMLTEIDLSNNNLSG 718
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 176/387 (45%), Gaps = 45/387 (11%)
Query: 112 LRTQSLKGPVSPLLFDLSK--LRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSL 169
L + + GP+ P L K L+ L L N G+ P +SN L L L N LSG++
Sbjct: 375 LSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTI 434
Query: 170 PSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRXXX 229
PS LG L+ L L L N GE+P EL +K L++L N G +P
Sbjct: 435 PSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIP----------- 483
Query: 230 XXXXXXXXXXXXTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGS 289
S +N +L+++ +SNN L+G IP I L+ L+ L N F+G+
Sbjct: 484 --------------SGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 529
Query: 290 IQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPL 349
I +ELG+C++ L L + T N +G +P+ + K +S + N G+ +
Sbjct: 530 IPAELGDCRS----LIWLDLNT-----NLFNGTIPAAMFK----QSGKIAANFIAGKRYV 576
Query: 350 EVGNCSMLKYIRLSNN--KLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQ 407
+ N M K + N + G +LN + N+ + G F N
Sbjct: 577 YIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF---DNNGS 633
Query: 408 LEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTXXXXXXXXXXXXX 467
+ LD+S NML+G IPKEIG++ + IL L N +GSIP +GD
Sbjct: 634 MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLD 693
Query: 468 XXXPEKIADLAQLQFLDLSYNNLSRPI 494
P+ ++ L L +DLS NNLS PI
Sbjct: 694 GRIPQAMSALTMLTEIDLSNNNLSGPI 720
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 155/351 (44%), Gaps = 45/351 (12%)
Query: 112 LRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPS 171
L+ G + P L + S+L L+LS N L G + +L +L+ L L N L G +P
Sbjct: 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 460
Query: 172 QLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRXXXXX 231
+L + LETL L N TGE+PS L + L + S N G +P +G
Sbjct: 461 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR-------- 512
Query: 232 XXXXXXXXXXTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQ 291
L++L+ L +SNN SGNIP E+ + L L N F G+I
Sbjct: 513 -----------------LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Query: 292 SELGN-----CKNFKSVLAELQIFTFSAGMN----------QLSGPLPSWLGKWNQMESV 336
+ + NF + + ++ + GM + G L + +
Sbjct: 556 AAMFKQSGKIAANF--IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPC 613
Query: 337 WLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIE 396
+ + + G N + ++ +S N LSG IP+E+ L +NL N +SG+I
Sbjct: 614 NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673
Query: 397 DVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIP 447
D G +L L LDLSSN L GRIP+ + L + + L++N +G IP
Sbjct: 674 DEVG---DLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 147/505 (29%), Positives = 219/505 (43%), Gaps = 84/505 (16%)
Query: 112 LRTQSLKGPVSPL--LFDLSKLRVLNLSQNLL-FGQPSPQVSNLKRLKMLSLGENQLSGS 168
L SL GPV+ L L S L+ LN+S N L F L L++L L N +SG+
Sbjct: 107 LSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGA 166
Query: 169 LPSQLGVLTW--------LETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIR 220
V+ W L+ L++ N +G++ ++ L+ LD S N F+ +P
Sbjct: 167 -----NVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF- 218
Query: 221 LGELTRXXXXXXXXXXXXXXXTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHY 280
LG+ + + ++ T L L++S+N G IPP LK L
Sbjct: 219 LGDCSALQHLDISGNKLSGDFSRAIST-CTELKLLNISSNQFVGPIPPL--PLKSLQYLS 275
Query: 281 LGINQFTGSIQSEL-GNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLN 339
L N+FTG I L G C + N G +P + G + +ES+ L+
Sbjct: 276 LAENKFTGEIPDFLSGACDTLTGL---------DLSGNHFYGAVPPFFGSCSLLESLALS 326
Query: 340 NNQFIGRIPLE-VGNCSMLKYIRLSNNKLSGSIPREL-NDSESLVEINLDGNMLSGTIED 397
+N F G +P++ + LK + LS N+ SG +P L N S SL+ ++L N SG I
Sbjct: 327 SNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI-- 384
Query: 398 VFGRCTN-LSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTXX 456
+ C N + L++L L +N TG+IP + N + L L+ N+ +G+IP LG
Sbjct: 385 LPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGS---- 440
Query: 457 XXXXXXXXXXXXXXPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIP-DLSYSHN 515
L++L+ L L N L E IP +L Y
Sbjct: 441 --------------------LSKLRDLKLWLNML-------------EGEIPQELMYVKT 467
Query: 516 YRKFDLSYNMLSGPIPKELGSCVVV---------LTGYIPRSLGHLSCSVKLNLSGNKLS 566
L +N L+G IP L +C + LTG IP+ +G L L LS N S
Sbjct: 468 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 527
Query: 567 VLVPTSFGNLNGLTNLDLSYNEFDG 591
+P G+ L LDL+ N F+G
Sbjct: 528 GNIPAELGDCRSLIWLDLNTNLFNG 552
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 155/337 (45%), Gaps = 42/337 (12%)
Query: 117 LKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVL 176
L G + L LSKLR L L N+L G+ ++ +K L+ L L N L+G +PS L
Sbjct: 430 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNC 489
Query: 177 TWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRXXXXXXXXXX 236
T L +SL +N TGE+P +G ++ L L S N F+G +P LG+
Sbjct: 490 TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC------------ 537
Query: 237 XXXXXTVSLFTNLQSLSYLDVSNNLLSGNIPPEI-SHLKKLSDHYLGINQFT----GSIQ 291
+SL +LD++ NL +G IP + K++ +++ ++ ++
Sbjct: 538 -------------RSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMK 584
Query: 292 SEL---GNCKNFKSVLAE-LQIFTFSAGMNQLS----GPLPSWLGKWNQMESVWLNNNQF 343
E GN F+ + +E L + N S G M + ++ N
Sbjct: 585 KECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNML 644
Query: 344 IGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCT 403
G IP E+G+ L + L +N +SGSIP E+ D L ++L N L G I +
Sbjct: 645 SGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAM---S 701
Query: 404 NLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSN 440
L+ L ++DLS+N L+G IP E+G + K +N
Sbjct: 702 ALTMLTEIDLSNNNLSGPIP-EMGQFETFPPAKFLNN 737
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 118/287 (41%), Gaps = 60/287 (20%)
Query: 111 VLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLP 170
+L L G + L + + L ++LS N L G+ + L+ L +L L N SG++P
Sbjct: 472 ILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531
Query: 171 SQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDF--------------------SG 210
++LG L L L +N F G +P+ + + +F +G
Sbjct: 532 AELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAG 591
Query: 211 N--GFNGTVPIRLGELTRXXXX--XXXXXXXXXXXTVSLFTNLQSLSYLDVSNNLLSGNI 266
N F G IR +L R T F N S+ +LD+S N+LSG I
Sbjct: 592 NLLEFQG---IRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYI 648
Query: 267 PPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSW 326
P EI + L LG N +GSI E+G+ + G+N L
Sbjct: 649 PKEIGSMPYLFILNLGHNDISGSIPDEVGDLR----------------GLNILD------ 686
Query: 327 LGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPR 373
L++N+ GRIP + +ML I LSNN LSG IP
Sbjct: 687 -----------LSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 310 FTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSG 369
F + G+N L GP+P + K Q+ +++ + G IP + L + S N LSG
Sbjct: 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSG 139
Query: 370 SIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNL 429
++P ++ +LV I DGN +SG I D +G + L + +S N LTG+IP NL
Sbjct: 140 TLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKL--FTSMTISRNRLTGKIPPTFANL 197
Query: 430 RSIQILKLNSNFFNGSIPMRLG 451
++ + L+ N G + G
Sbjct: 198 -NLAFVDLSRNMLEGDASVLFG 218
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 117/293 (39%), Gaps = 55/293 (18%)
Query: 177 TWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRXXXXXXXXXX 236
+WL T C+ ++ G + ++ +LD SG PI
Sbjct: 26 SWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIP---------------- 69
Query: 237 XXXXXTVSLFTNLQSLSYLDVSN-NLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELG 295
S NL L++L + N L G IPP I+ L +L HYL I S G
Sbjct: 70 -------SSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQL--HYLYITHTNVS-----G 115
Query: 296 NCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCS 355
+F S + L FS N LSG LP + + + + N+ G IP G+ S
Sbjct: 116 AIPDFLSQIKTLVTLDFS--YNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFS 173
Query: 356 -MLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQ------- 407
+ + +S N+L+G IP + +L ++L NML G +FG N +
Sbjct: 174 KLFTSMTISRNRLTGKIPPTFAN-LNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNS 232
Query: 408 -------------LEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIP 447
L LDL +N + G +P+ + L+ + L ++ N G IP
Sbjct: 233 LAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 101/252 (40%), Gaps = 16/252 (6%)
Query: 127 DLSKLRVLNLS-QNLLFGQPSPQVSNLKRLKMLSL----GENQLSGSLPSQLGVLTWLET 181
D RV NL L +P P S+L L L+ G N L G +P + LT L
Sbjct: 46 DTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHY 105
Query: 182 LSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRXXXXXXXXXXXXXXX 241
L + + +G +P L +K L +LDFS N +GT+P + L
Sbjct: 106 LYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAI 165
Query: 242 TVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFK 301
S + + + + +S N L+G IPP ++L L+ L N G G+ KN +
Sbjct: 166 PDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQ 224
Query: 302 SVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIR 361
+ F G LS + + L NN+ G +P + L +
Sbjct: 225 KIHLAKNSLAFDLGKVGLS----------KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLN 274
Query: 362 LSNNKLSGSIPR 373
+S N L G IP+
Sbjct: 275 VSFNNLCGEIPQ 286
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 126/311 (40%), Gaps = 51/311 (16%)
Query: 62 DFIIFNFNSLMMGKLRLRQPYKTLSRRLGLAIANALKDLEELLLRVVYQVLRTQSLKGPV 121
D + N+L + L L +PY I ++L +L L + + +L GP+
Sbjct: 46 DTQTYRVNNLDLSGLNLPKPY---------PIPSSLANLPYLNFLYIGGI---NNLVGPI 93
Query: 122 SPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLET 181
P + L++L L ++ + G +S +K L L N LSG+LP + L L
Sbjct: 94 PPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVG 153
Query: 182 LSLCSNSFTGEMPSELGDMKQL-KSLDFSGNGFNGTVPIRLGELTRXXXXXXXXXXXXXX 240
++ N +G +P G +L S+ S N G +P
Sbjct: 154 ITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIP---------------------- 191
Query: 241 XTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNF 300
F NL +L+++D+S N+L G+ K +L N + ++G KN
Sbjct: 192 ---PTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNL 246
Query: 301 KSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYI 360
+ +L+ N++ G LP L + + S+ ++ N G IP + GN
Sbjct: 247 NGL--DLR-------NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVS 296
Query: 361 RLSNNK-LSGS 370
+NNK L GS
Sbjct: 297 AYANNKCLCGS 307
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 25/133 (18%)
Query: 471 PEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPD-LSYSHNYRKFDLSYNMLSGP 529
P IA L QL +L +++ N+S I PD LS D SYN LSG
Sbjct: 94 PPAIAKLTQLHYLYITHTNVSGAI-------------PDFLSQIKTLVTLDFSYNALSGT 140
Query: 530 IPKELGSCVVV---------LTGYIPRSLGHLS-CSVKLNLSGNKLSVLVPTSFGNLNGL 579
+P + S + ++G IP S G S + +S N+L+ +P +F NLN L
Sbjct: 141 LPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-L 199
Query: 580 TNLDLSYNEFDGN 592
+DLS N +G+
Sbjct: 200 AFVDLSRNMLEGD 212
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 96/250 (38%), Gaps = 56/250 (22%)
Query: 169 LPSQLGVLTWLETLSLCS-NSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRX 227
+PS L L +L L + N+ G +P + + QL L + +G +P
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIP--------- 118
Query: 228 XXXXXXXXXXXXXXTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFT 287
+ +++L LD S N LSG +PP IS L L N+ +
Sbjct: 119 ----------------DFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRIS 162
Query: 288 GSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQM------------ES 335
G+I G+ F + + I N+L+G +P N S
Sbjct: 163 GAIPDSYGS---FSKLFTSMTI-----SRNRLTGKIPPTFANLNLAFVDLSRNMLEGDAS 214
Query: 336 VWLNNNQFIGRIPL----------EVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEIN 385
V +++ +I L +VG L + L NN++ G++P+ L + L +N
Sbjct: 215 VLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLN 274
Query: 386 LDGNMLSGTI 395
+ N L G I
Sbjct: 275 VSFNNLCGEI 284
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 52/74 (70%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+KA+NILL+E+F+A V DFGLA+L+ H+ V I ++ PEY K++E+
Sbjct: 164 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEK 223
Query: 682 DNIYRFGVVLLELV 695
+++ +GV+LLEL+
Sbjct: 224 TDVFGYGVMLLELI 237
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 52/74 (70%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+KA+NILL+E+F+A V DFGLA+L+ H+ V I ++ PEY K++E+
Sbjct: 156 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEK 215
Query: 682 DNIYRFGVVLLELV 695
+++ +GV+LLEL+
Sbjct: 216 TDVFGYGVMLLELI 229
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D+K+ N+L+++ + KV DFGL+RL + S A ++ PE R +NE+
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRLKA-SXFLXSKXAAGTPEWMAPEVLRDEPSNEK 219
Query: 682 DNIYRFGVVLLELVIRKQPTG 702
++Y FGV+L EL +QP G
Sbjct: 220 SDVYSFGVILWELATLQQPWG 240
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDC-KSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K+ NILL+E+F K+ DFG+++ ++ ++H+ V + Y+ PEY + E
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 681 RDNIYRFGVVLLELVIRK 698
+ ++Y FGVVL E++ +
Sbjct: 221 KSDVYSFGVVLFEVLCAR 238
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDC-KSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K+ NILL+E+F K+ DFG+++ ++ ++H+ V + Y+ PEY + E
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 681 RDNIYRFGVVLLELVIRK 698
+ ++Y FGVVL E++ +
Sbjct: 221 KSDVYSFGVVLFEVLCAR 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAI-SYVPPEYGRARKANE 680
V +++K+ N+L+++ + KV DFGL+RL + +S+ A+ ++ PE R +NE
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNE 218
Query: 681 RDNIYRFGVVLLELVIRKQPTG 702
+ ++Y FGV+L EL +QP G
Sbjct: 219 KSDVYSFGVILWELATLQQPWG 240
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISD-CKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK++NILL+E F AK+ DFGLAR ++ + + + +Y+ PE R +
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG-EITP 213
Query: 681 RDNIYRFGVVLLELV 695
+ +IY FGVVLLE++
Sbjct: 214 KSDIYSFGVVLLEII 228
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKS---HISTDVASAISYVPPEYGRARKA 678
V +D+ A N +L+E F KV DFGLAR + D + H T + ++ E + +K
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKP 723
+ +++ FGV+L EL+ R P P DI V + + +P
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 258
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKS---HISTDVASAISYVPPEYGRARKA 678
V +D+ A N +L+E F KV DFGLAR + D + H T + ++ E + +K
Sbjct: 174 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 233
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKP 723
+ +++ FGV+L EL+ R P P DI V + + +P
Sbjct: 234 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 278
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKS---HISTDVASAISYVPPEYGRARKA 678
V +D+ A N +L+E F KV DFGLAR + D + H T + ++ E + +K
Sbjct: 173 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 232
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKP 723
+ +++ FGV+L EL+ R P P DI V + + +P
Sbjct: 233 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 277
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISD-CKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK++NILL+E F AK+ DFGLAR ++ + + +Y+ PE R +
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG-EITP 213
Query: 681 RDNIYRFGVVLLELV 695
+ +IY FGVVLLE++
Sbjct: 214 KSDIYSFGVVLLEII 228
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKS---HISTDVASAISYVPPEYGRARKA 678
V +D+ A N +L+E F KV DFGLAR + D + H T + ++ E + +K
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKP 723
+ +++ FGV+L EL+ R P P DI V + + +P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 259
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKS---HISTDVASAISYVPPEYGRARKA 678
V +D+ A N +L+E F KV DFGLAR + D + H T + ++ E + +K
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKP 723
+ +++ FGV+L EL+ R P P DI V + + +P
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 258
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKS---HISTDVASAISYVPPEYGRARKA 678
V +D+ A N +L+E F KV DFGLAR + D + H T + ++ E + +K
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKP 723
+ +++ FGV+L EL+ R P P DI V + + +P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 259
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKS---HISTDVASAISYVPPEYGRARKA 678
V +D+ A N +L+E F KV DFGLAR + D + H T + ++ E + +K
Sbjct: 147 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 206
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKP 723
+ +++ FGV+L EL+ R P P DI V + + +P
Sbjct: 207 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 251
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKS---HISTDVASAISYVPPEYGRARKA 678
V +D+ A N +L+E F KV DFGLAR + D + H T + ++ E + +K
Sbjct: 152 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 211
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKP 723
+ +++ FGV+L EL+ R P P DI V + + +P
Sbjct: 212 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 256
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKS---HISTDVASAISYVPPEYGRARKA 678
V +D+ A N +L+E F KV DFGLAR + D + H T + ++ E + +K
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 212
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKP 723
+ +++ FGV+L EL+ R P P DI V + + +P
Sbjct: 213 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 257
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKS---HISTDVASAISYVPPEYGRARKA 678
V +D+ A N +L+E F KV DFGLAR + D + H T + ++ E + +K
Sbjct: 150 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 209
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKP 723
+ +++ FGV+L EL+ R P P DI V + + +P
Sbjct: 210 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 254
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK---SHISTDVASAISYVPPEYGRARKA 678
V +D+ A N +L+E F KV DFGLAR + D + H T + ++ E + +K
Sbjct: 160 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 219
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKP 723
+ +++ FGV+L EL+ R P P DI V + + +P
Sbjct: 220 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 264
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK---SHISTDVASAISYVPPEYGRARKA 678
V +D+ A N +L+E F KV DFGLAR + D + H T + ++ E + +K
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 215
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKP 723
+ +++ FGV+L EL+ R P P DI V + + +P
Sbjct: 216 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 260
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK---SHISTDVASAISYVPPEYGRARKA 678
V +D+ A N +L+E F KV DFGLAR + D + H T + ++ E + +K
Sbjct: 214 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 273
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVV 712
+ +++ FGV+L EL+ R P P DI V
Sbjct: 274 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 307
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK---SHISTDVASAISYVPPEYGRARKA 678
V +D+ A N +L+E F KV DFGLAR + D + H T + ++ E + +K
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 212
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKP 723
+ +++ FGV+L EL+ R P P DI V + + +P
Sbjct: 213 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 257
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK---SHISTDVASAISYVPPEYGRARKA 678
V +D+ A N +L+E F KV DFGLAR + D + H T + ++ E + +K
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVV 712
+ +++ FGV+L EL+ R P P DI V
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK---SHISTDVASAISYVPPEYGRARKA 678
V +D+ A N +L+E F KV DFGLAR + D + H T + ++ E + +K
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKP 723
+ +++ FGV+L EL+ R P P DI V + + +P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 259
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D++A+NIL+ E+ KV DFGLARLI D + I + PE + +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L EL + + P +++++
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVL 225
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISD-CKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK++NILL+E F AK+ DFGLAR + + + +Y+ PE R +
Sbjct: 149 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG-EITP 207
Query: 681 RDNIYRFGVVLLELV 695
+ +IY FGVVLLE++
Sbjct: 208 KSDIYSFGVVLLEII 222
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK---SHISTDVASAISYVPPEYGRARKA 678
V +D+ A N +L+E F KV DFGLAR + D + H T + ++ E + +K
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKF 215
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKP 723
+ +++ FGV+L EL+ R P P DI V + + +P
Sbjct: 216 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 260
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D++A+NIL+ E+ KV DFGLARLI D + I + PE + +
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L EL + + P +++++
Sbjct: 186 SDVWSFGILLTELTTKGRVPYPGMVNREVL 215
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D++A+NIL+ E+ KV DFGLARLI D + I + PE + +
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L EL + + P +++++
Sbjct: 193 SDVWSFGILLTELTTKGRVPYPGMVNREVL 222
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D++A+NIL+ E+ KV DFGLARLI D + I + PE + +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L EL + + P +++++
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVL 225
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D++A+NIL+ E+ KV DFGLARLI D + I + PE + +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L EL + + P +++++
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVL 225
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D++A+NIL+ E+ KV DFGLARLI D + I + PE + +
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L EL + + P +++++
Sbjct: 193 SDVWSFGILLTELTTKGRVPYPGMVNREVL 222
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D++A+NIL+ E+ KV DFGLARLI D + I + PE + +
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L EL + + P +++++
Sbjct: 362 SDVWSFGILLTELTTKGRVPYPGMVNREVL 391
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D++A+NIL+ E+ KV DFGLARLI D + I + PE + +
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L EL + + P +++++
Sbjct: 362 SDVWSFGILLTELTTKGRVPYPGMVNREVL 391
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D++A+NIL+ E+ KV DFGLARLI D + I + PE + +
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L EL + + P +++++
Sbjct: 362 SDVWSFGILLTELTTKGRVPYPGMVNREVL 391
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D++A+NIL+ E+ KV DFGLARLI D + I + PE + +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L EL + + P +++++
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVL 225
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D++A+NIL+ E+ KV DFGLARLI D + I + PE + +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L EL + + P +++++
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVL 225
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D++A+NIL+ E+ KV DFGLARLI D + I + PE + +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L EL + + P +++++
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVL 225
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D++A+NIL+ E+ KV DFGLARLI D + I + PE + +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L EL + + P +++++
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVL 225
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D++A+NIL+ E+ KV DFGLARLI D + I + PE + +
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L EL + + P +++++
Sbjct: 185 SDVWSFGILLTELTTKGRVPYPGMVNREVL 214
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D++A+NIL+ E+ KV DFGLARLI D + I + PE + +
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L EL + + P +++++
Sbjct: 445 SDVWSFGILLTELTTKGRVPYPGMVNREVL 474
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHI-STDVASAISYVPPEYGRARKANE 680
+ +DIK++NILL+E F AK+ DFGLAR + + + +Y PE R +
Sbjct: 146 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG-EITP 204
Query: 681 RDNIYRFGVVLLELV 695
+ +IY FGVVLLE++
Sbjct: 205 KSDIYSFGVVLLEII 219
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D++A+NIL+ E+ KV DFGLARLI D + I + PE + +
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L EL + + P +++++
Sbjct: 189 SDVWSFGILLTELTTKGRVPYPGMVNREVL 218
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D++A+NIL+ E+ KV DFGLARLI D + I + PE + +
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L EL + + P +++++
Sbjct: 187 SDVWSFGILLTELTTKGRVPYPGMVNREVL 216
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D+ A+NIL+ E+ KV DFGLARLI D + I + PE + +
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L EL + + P +++++
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVL 225
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +DIK NIL++ + K+ DFG+A+ +S+ + V + Y PE + +E
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDEC 192
Query: 682 DNIYRFGVVLLELVIRKQP 700
+IY G+VL E+++ + P
Sbjct: 193 TDIYSIGIVLYEMLVGEPP 211
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D++A+NIL+ E+ KV DFGL RLI D + I + PE + +
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L EL + + P +++++
Sbjct: 363 SDVWSFGILLTELTTKGRVPYPGMVNREVL 392
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA--SAISYVPPEYGRARKAN 679
+ +D+K +NI+++ KV+DFG+AR I+D + ++ A Y+ PE R +
Sbjct: 138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD 197
Query: 680 ERDNIYRFGVVLLELVIRKQP 700
R ++Y G VL E++ + P
Sbjct: 198 ARSDVYSLGCVLYEVLTGEPP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA--SAISYVPPEYGRARKAN 679
+ +D+K +NI+++ KV+DFG+AR I+D + ++ A Y+ PE R +
Sbjct: 138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD 197
Query: 680 ERDNIYRFGVVLLELVIRKQP 700
R ++Y G VL E++ + P
Sbjct: 198 ARSDVYSLGCVLYEVLTGEPP 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA--SAISYVPPEYGRARKAN 679
+ +D+K +NI+++ KV+DFG+AR I+D + ++ A Y+ PE R +
Sbjct: 155 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD 214
Query: 680 ERDNIYRFGVVLLELVIRKQP 700
R ++Y G VL E++ + P
Sbjct: 215 ARSDVYSLGCVLYEVLTGEPP 235
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA--SAISYVPPEYGRARKAN 679
+ +D+K +NI+++ KV+DFG+AR I+D + ++ A Y+ PE R +
Sbjct: 138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD 197
Query: 680 ERDNIYRFGVVLLELVIRKQP 700
R ++Y G VL E++ + P
Sbjct: 198 ARSDVYSLGCVLYEVLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA--SAISYVPPEYGRARKAN 679
+ +D+K +NI+++ KV+DFG+AR I+D + ++ A Y+ PE R +
Sbjct: 138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD 197
Query: 680 ERDNIYRFGVVLLELVIRKQP 700
R ++Y G VL E++ + P
Sbjct: 198 ARSDVYSLGCVLYEVLTGEPP 218
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D++++NIL+ K+ DFGLARLI D + I + PE + +
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV--------VGCVSDNPIA 721
+++ FG++L ELV + + P +++++ + C D PI+
Sbjct: 187 SDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPIS 234
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHI--STDVASAISYVPPEYGRARKAN 679
+ +D+K +NIL++ KV+DFG+AR I+D + + + V Y+ PE R +
Sbjct: 138 IHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVD 197
Query: 680 ERDNIYRFGVVLLELVIRKQP 700
R ++Y G VL E++ + P
Sbjct: 198 ARSDVYSLGCVLYEVLTGEPP 218
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D++A+NIL+++ K+ DFGLARLI D + I + PE +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L E+V + P + +++
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK-SHISTDVASAISYVPPEYGRARKANE 680
+ +D+K++NI L+ED K+ DFGLA + S SH ++ +I ++ PE R + N
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 681 ---RDNIYRFGVVLLELVIRKQP 700
+ ++Y FG+VL EL+ + P
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK-SHISTDVASAISYVPPEYGRARKANE 680
+ +D+K++NI L+ED K+ DFGLA + S SH ++ +I ++ PE R + N
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 681 ---RDNIYRFGVVLLELVIRKQP 700
+ ++Y FG+VL EL+ + P
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK-SHISTDVASAISYVPPEYGRARKANE 680
+ +D+K++NI L+ED K+ DFGLA + S SH ++ +I ++ PE R + N
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 681 ---RDNIYRFGVVLLELVIRKQP 700
+ ++Y FG+VL EL+ + P
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQLP 210
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK-SHISTDVASAISYVPPEYGRARKANE 680
+ +D+K++NI L+ED K+ DFGLA + S SH ++ +I ++ PE R + N
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 681 ---RDNIYRFGVVLLELVIRKQP 700
+ ++Y FG+VL EL+ + P
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK-SHISTDVASAISYVPPEYGRARKANE 680
+ +D+K++NI L+ED K+ DFGLA + S SH ++ +I ++ PE R + N
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 681 ---RDNIYRFGVVLLELVIRKQP 700
+ ++Y FG+VL EL+ + P
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK-SHISTDVASAISYVPPEYGRARKANE 680
+ +D+K++NI L+ED K+ DFGLA + S SH ++ +I ++ PE R + N
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 681 ---RDNIYRFGVVLLELVIRKQP 700
+ ++Y FG+VL EL+ + P
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK-SHISTDVASAISYVPPEYGRARKANE 680
+ +D+K++NI L+ED K+ DFGLA + S SH ++ +I ++ PE R + N
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 212
Query: 681 ---RDNIYRFGVVLLELVIRKQP 700
+ ++Y FG+VL EL+ + P
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D++A+NIL+++ K+ DFGLARLI D + I + PE +
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 199
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L E+V + P + +++
Sbjct: 200 SDVWSFGILLTEIVTHGRIPYPGMTNPEVI 229
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D++A+NIL+++ K+ DFGLARLI D + I + PE +
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 198
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L E+V + P + +++
Sbjct: 199 SDVWSFGILLTEIVTHGRIPYPGMTNPEVI 228
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D++A+NIL+++ K+ DFGLARLI D + I + PE +
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L E+V + P + +++
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D++A+NIL+++ K+ DFGLARLI D + I + PE +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L E+V + P + +++
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D++A+NIL+++ K+ DFGLARLI D + I + PE +
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 192
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L E+V + P + +++
Sbjct: 193 SDVWSFGILLTEIVTHGRIPYPGMTNPEVI 222
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D++A+NIL+++ K+ DFGLARLI D + I + PE +
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 200
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L E+V + P + +++
Sbjct: 201 SDVWSFGILLTEIVTHGRIPYPGMTNPEVI 230
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D++A+NIL+++ K+ DFGLARLI D + I + PE +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L E+V + P + +++
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D++A+NIL+++ K+ DFGLARLI D + I + PE +
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L E+V + P + +++
Sbjct: 192 SDVWSFGILLTEIVTHGRIPYPGMTNPEVI 221
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D++A+NIL+++ K+ DFGLARLI D + I + PE +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L E+V + P + +++
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK-SHISTDVASAISYVPPEYGRARKANE 680
+ +D+K++NI L+ED K+ DFGLA + S SH ++ +I ++ PE R + +N
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 681 ---RDNIYRFGVVLLELVIRKQP 700
+ ++Y FG+VL EL+ + P
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQLP 212
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D++A+NIL+++ K+ DFGLARLI D + I + PE +
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L E+V + P + +++
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D++A+NIL+++ K+ DFGLARLI D + I + PE +
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L E+V + P + +++
Sbjct: 196 SDVWSFGILLTEIVTHGRIPYPGMTNPEVI 225
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D++A+NIL+++ K+ DFGLARLI D + I + PE +
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L E+V + P + +++
Sbjct: 186 SDVWSFGILLTEIVTHGRIPYPGMTNPEVI 215
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK-SHISTDVASAISYVPPEYGRARKANE 680
+ +D+K++NI L+ED K+ DFGLA S SH ++ +I ++ PE R + N
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 681 ---RDNIYRFGVVLLELVIRKQP 700
+ ++Y FG+VL EL+ + P
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK-SHISTDVASAISYVPPEYGRARKANE 680
+ +D+K++NI L+ED K+ DFGLA S SH ++ +I ++ PE R + N
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 681 ---RDNIYRFGVVLLELVIRKQP 700
+ ++Y FG+VL EL+ + P
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK-SHISTDVASAISYVPPEYGRARKANE 680
+ +D+K++NI L+ED K+ DFGLA S SH ++ +I ++ PE R + N
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 205
Query: 681 ---RDNIYRFGVVLLELVIRKQP 700
+ ++Y FG+VL EL+ + P
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQLP 228
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D++A+N+L++E K+ DFGLAR+I D + I + PE +
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
N++ FG++L E+V + P + D++
Sbjct: 191 SNVWSFGILLYEIVTYGKIPYPGRTNADVM 220
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK-SHISTDVASAISYVPPEYGRARKANE 680
+ +D+K++NI L+ED K+ DFGLA S SH ++ +I ++ PE R + +N
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 681 ---RDNIYRFGVVLLELVIRKQP 700
+ ++Y FG+VL EL+ + P
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK-SHISTDVASAISYVPPEYGRARKANE 680
+ +D+K++NI L+ED K+ DFGLA S SH ++ +I ++ PE R + +N
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 681 ---RDNIYRFGVVLLELVIRKQP 700
+ ++Y FG+VL EL+ + P
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAI--SYVPPEYGRARKAN 679
V +D+ A NIL+N + KV DFGL+R+I D + T I + PE + RK
Sbjct: 167 VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFT 226
Query: 680 ERDNIYRFGVVLLELV 695
+++ +G+V+ E++
Sbjct: 227 SASDVWSYGIVMWEVM 242
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ ++++A+NIL+++ K+ DFGLARLI D + I + PE +
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L E+V + P + +++
Sbjct: 187 SDVWSFGILLTEIVTHGRIPYPGMTNPEVI 216
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLAR--LISDCKSHISTDVASAISYVPPEYGRARKAN 679
V +D+K NILL++D K+ DFG+ + ++ D K + + Y+ PE +K N
Sbjct: 141 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK---TNEFCGTPDYIAPEILLGQKYN 197
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPI 720
+ + FGV+L E++I + P + +++++ DNP
Sbjct: 198 HSVDWWSFGVLLYEMLIGQSPFHGQ-DEEELFHSIRMDNPF 237
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKA 678
AV +D+ A NIL+N + KV DFGL+R++ D T I + PE RK
Sbjct: 168 AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ +G+VL E++ + + ++D++
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NILLNED ++ DFG A+++S + K + YV PE + A++
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASK 213
Query: 681 RDNIYRFGVVLLELV 695
+++ G ++ +LV
Sbjct: 214 SSDLWALGCIIYQLV 228
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D++A+N+L++E K+ DFGLAR+I D + I + PE +
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIVVG 713
+++ FG++L E+V + P + D++
Sbjct: 192 SDVWSFGILLYEIVTYGKIPYPGRTNADVMTA 223
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKANE 680
V +D+ A N+L++ED AKV DFGL + S + D + + PE R +K +
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEALREKKFST 365
Query: 681 RDNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+ +++ FG++L E+ + P+ KD+V
Sbjct: 366 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 396
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDC--KSHISTDVASAISYVPPEYGRARKAN 679
V +D+ A NIL+N + KV DFGL+R++ D ++ ++ I + PE RK
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFT 228
Query: 680 ERDNIYRFGVVLLELV 695
+++ FG+V+ E++
Sbjct: 229 SASDVWSFGIVMWEVM 244
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A NIL+N + KV DFGLAR++ D T I + PE RK
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ +G+VL E++ + + ++D++
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLAR--LISDCKSHISTDVASAISYVPPEYGRARKAN 679
V +D+K NILL++D K+ DFG+ + ++ D K++ Y+ PE +K N
Sbjct: 140 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNX---FCGTPDYIAPEILLGQKYN 196
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPI 720
+ + FGV+L E++I + P + +++++ DNP
Sbjct: 197 HSVDWWSFGVLLYEMLIGQSPFHGQ-DEEELFHSIRMDNPF 236
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D++A+NIL++ K+ DFGLAR+I D + I + PE +
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L+E+V + P + +++
Sbjct: 366 SDVWSFGILLMEIVTYGRIPYPGMSNPEVI 395
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKANE 680
V +D+ A N+L++ED AKV DFGL + S + D + + PE R +K +
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEALREKKFST 193
Query: 681 RDNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+ +++ FG++L E+ + P+ KD+V
Sbjct: 194 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 224
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKANE 680
V +D+ A N+L++ED AKV DFGL + S + D + + PE R +K +
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEALREKKFST 178
Query: 681 RDNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+ +++ FG++L E+ + P+ KD+V
Sbjct: 179 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 209
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D++A+NIL++ K+ DFGLAR+I D + I + PE +
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 192
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L+E+V + P + +++
Sbjct: 193 SDVWSFGILLMEIVTYGRIPYPGMSNPEVI 222
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA---ISYVPPEYGRARKA 678
V +D+ A N +L+E F KV DFGLAR I D + + A + + E + +
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRF 205
Query: 679 NERDNIYRFGVVLLELVIRKQP 700
+ +++ FGV+L EL+ R P
Sbjct: 206 TTKSDVWSFGVLLWELLTRGAP 227
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIKA+N+LL+E D K+ DFG+A ++D + +T V + ++ PE + + +
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF-WMAPEVIQQSAYDSK 200
Query: 682 DNIYRFGVVLLELVIRKQP 700
+I+ G+ +EL + P
Sbjct: 201 ADIWSLGITAIELAKGEPP 219
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S TD+ + Y+PPE R +E+
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 191
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S TD+ + Y+PPE R +E+
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NILLNED ++ DFG A+++S + K + YV PE + A +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXK 213
Query: 681 RDNIYRFGVVLLELV 695
+++ G ++ +LV
Sbjct: 214 SSDLWALGCIIYQLV 228
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NILLNED ++ DFG A+++S + K + YV PE + A +
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 214
Query: 681 RDNIYRFGVVLLELV 695
+++ G ++ +LV
Sbjct: 215 SSDLWALGCIIYQLV 229
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA----ISYVPPEYGRARK 677
V +D+ A NIL+N + KV DFGL+R + D S + A I + PE + RK
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 216
Query: 678 ANERDNIYRFGVVLLELV 695
+++ +G+V+ E++
Sbjct: 217 FTSASDVWSYGIVMWEVM 234
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NILLNED ++ DFG A+++S + K + YV PE + A +
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 210
Query: 681 RDNIYRFGVVLLELV 695
+++ G ++ +LV
Sbjct: 211 SSDLWALGCIIYQLV 225
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S TD+ + Y+PPE R +E+
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S TD+ + Y+PPE R +E+
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 187
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 188 VDLWSLGVLCYEFLVGKPP 206
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A NIL+N + KV DFGL+R++ D T I + PE RK
Sbjct: 146 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFT 205
Query: 680 ERDNIYRFGVVLLELV 695
+++ +G+V+ E+V
Sbjct: 206 SASDVWSYGIVMWEVV 221
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRA 675
GK + + +D+K NILLNED ++ DFG A+++S + K + YV PE
Sbjct: 153 GKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 676 RKANERDNIYRFGVVLLELV 695
+ A + +++ G ++ +LV
Sbjct: 212 KSACKSSDLWALGCIIYQLV 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NILLNED ++ DFG A+++S + K + YV PE + A +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 681 RDNIYRFGVVLLELV 695
+++ G ++ +LV
Sbjct: 212 SSDLWALGCIIYQLV 226
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NILLNED ++ DFG A+++S + K + YV PE + A +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 681 RDNIYRFGVVLLELV 695
+++ G ++ +LV
Sbjct: 214 SSDLWALGCIIYQLV 228
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRA 675
GK + + +D+K NILLNED ++ DFG A+++S + K + YV PE
Sbjct: 155 GKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 676 RKANERDNIYRFGVVLLELV 695
+ A + +++ G ++ +LV
Sbjct: 214 KSACKSSDLWALGCIIYQLV 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NILLNED ++ DFG A+++S + K + YV PE + A +
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 214
Query: 681 RDNIYRFGVVLLELV 695
+++ G ++ +LV
Sbjct: 215 SSDLWALGCIIYQLV 229
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A NIL+N + KV DFGL+R++ D T I + PE RK
Sbjct: 157 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 216
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ +G+VL E++ + + ++D++
Sbjct: 217 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 248
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NILLNED ++ DFG A+++S + K + YV PE + A +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 681 RDNIYRFGVVLLELV 695
+++ G ++ +LV
Sbjct: 214 SSDLWALGCIIYQLV 228
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NILLNED ++ DFG A+++S + K + YV PE + A +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 681 RDNIYRFGVVLLELV 695
+++ G ++ +LV
Sbjct: 214 SSDLWALGCIIYQLV 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NILLNED ++ DFG A+++S + K + YV PE + A +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 681 RDNIYRFGVVLLELV 695
+++ G ++ +LV
Sbjct: 214 SSDLWALGCIIYQLV 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NILLNED ++ DFG A+++S + K + YV PE + A +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 681 RDNIYRFGVVLLELV 695
+++ G ++ +LV
Sbjct: 212 SSDLWALGCIIYQLV 226
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NILLNED ++ DFG A+++S + K + YV PE + A +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 681 RDNIYRFGVVLLELV 695
+++ G ++ +LV
Sbjct: 212 SSDLWALGCIIYQLV 226
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NILLNED ++ DFG A+++S + K + YV PE + A +
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 191
Query: 681 RDNIYRFGVVLLELV 695
+++ G ++ +LV
Sbjct: 192 SSDLWALGCIIYQLV 206
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A NIL+N + KV DFGL+R++ D T I + PE RK
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 199
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ +G+VL E++ + + ++D++
Sbjct: 200 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 231
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NILLNED ++ DFG A+++S + K + YV PE + A +
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 210
Query: 681 RDNIYRFGVVLLELV 695
+++ G ++ +LV
Sbjct: 211 SSDLWALGCIIYQLV 225
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A NIL+N + KV DFGL+R++ D T I + PE RK
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 199
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ +G+VL E++ + + ++D++
Sbjct: 200 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NILLNED ++ DFG A+++S + K + YV PE + A +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACK 211
Query: 681 RDNIYRFGVVLLELV 695
+++ G ++ +LV
Sbjct: 212 SSDLWALGCIIYQLV 226
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NILLNED ++ DFG A+++S + K + YV PE + A +
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 188
Query: 681 RDNIYRFGVVLLELV 695
+++ G ++ +LV
Sbjct: 189 SSDLWALGCIIYQLV 203
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A NIL+N + KV DFGL+R++ D T I + PE RK
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ +G+VL E++ + + ++D++
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NILLNED ++ DFG A+++S + K + YV PE + A +
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 189
Query: 681 RDNIYRFGVVLLELV 695
+++ G ++ +LV
Sbjct: 190 SSDLWALGCIIYQLV 204
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKA 678
AV +D+ A NIL+N + KV DFG++R++ D T I + PE RK
Sbjct: 152 AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 211
Query: 679 NERDNIYRFGVVLLELV 695
+++ +G+V+ E++
Sbjct: 212 TSASDVWSYGIVMWEVM 228
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NILLNED ++ DFG A+++S + K + YV PE + A +
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 195
Query: 681 RDNIYRFGVVLLELV 695
+++ G ++ +LV
Sbjct: 196 SSDLWALGCIIYQLV 210
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A NIL+N + KV DFGL+R++ D T I + PE RK
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ +G+VL E++ + + ++D++
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NILLNED ++ DFG A+++S + K + YV PE + A +
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 190
Query: 681 RDNIYRFGVVLLELV 695
+++ G ++ +LV
Sbjct: 191 SSDLWALGCIIYQLV 205
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A NIL+N + KV DFGL+R++ D T I + PE RK
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ +G+VL E++ + + ++D++
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A NIL+N + KV DFGL+R++ D T I + PE RK
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ +G+VL E++ + + ++D++
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A NIL+N + KV DFGL+R++ D T I + PE RK
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ +G+VL E++ + + ++D++
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A NIL+N + KV DFGL+R++ D T I + PE RK
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ +G+VL E++ + + ++D++
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A NIL+N + KV DFGL+R++ D T I + PE RK
Sbjct: 167 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 226
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ +G+VL E++ + + ++D++
Sbjct: 227 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 258
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIKA+N+LL+E + K+ DFG+A ++D + +T V + ++ PE + + +
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-WMAPEVIKQSAYDSK 204
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNP 719
+I+ G+ +EL R +P + ++ +NP
Sbjct: 205 ADIWSLGITAIELA-RGEPPHSELHPMKVLFLIPKNNP 241
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A NIL+N + KV DFGL R++ D T I + PE RK
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ +G+VL E++ + + ++D++
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIKA+N+LL+E + K+ DFG+A ++D + +T V + ++ PE + + +
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-WMAPEVIKQSAYDSK 184
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNP 719
+I+ G+ +EL R +P + ++ +NP
Sbjct: 185 ADIWSLGITAIELA-RGEPPHSELHPMKVLFLIPKNNP 221
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 616 DGKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA 675
DG + +D+K +N+ L+ + K+ DFGLAR+++ S T V + Y+ PE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPY-YMSPEQMNR 190
Query: 676 RKANERDNIYRFGVVLLELV 695
NE+ +I+ G +L EL
Sbjct: 191 MSYNEKSDIWSLGCLLYELC 210
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S T++ + Y+PPE R +E+
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCGTLDYLPPEMIEGRMHDEK 186
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+N+ KV DFGL+R + D + S + + PPE K + +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 682 DNIYRFGVVLLEL 694
+I+ FGV++ E+
Sbjct: 202 SDIWAFGVLMWEI 214
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISD--CKSHISTDVASAISYVPPEYGRARKAN 679
V +D+ A N+L++ + KV DFGL+R++ D ++ +T I + PE R +
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFS 232
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FGVV+ E++ + ++D++
Sbjct: 233 SASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 25/127 (19%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S T ++ + Y+PPE R +E+
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEK 187
Query: 682 DNIYRFGVVLLELVIRKQP------------------TGPKFED---KDIVVGCVSDNPI 720
+++ GV+ E ++ K P T P F +D++ + NP
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 247
Query: 721 AKPGMLR 727
+P MLR
Sbjct: 248 QRP-MLR 253
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S D+ + Y+PPE R +E+
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEK 189
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+N+ KV DFGL+R + D + S + + PPE K + +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 682 DNIYRFGVVLLEL 694
+I+ FGV++ E+
Sbjct: 202 SDIWAFGVLMWEI 214
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 622 VKKDIKASNILLNEDFDA-KVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+LL K+ DFG A D ++H++ + SA +++ PE +E
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHMTNNKGSA-AWMAPEVFEGSNYSE 183
Query: 681 RDNIYRFGVVLLELVIRKQP----TGPKF 705
+ +++ +G++L E++ R++P GP F
Sbjct: 184 KCDVFSWGIILWEVITRRKPFDEIGGPAF 212
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +DI A N+L++ + K+ DFGL+R + D + ++ I ++ PE R+
Sbjct: 161 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 220
Query: 682 DNIYRFGVVLLELVI 696
+++ FGV + E+++
Sbjct: 221 SDVWMFGVCMWEILM 235
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 622 VKKDIKASNILLNEDFDA-KVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+LL K+ DFG A D ++H++ + SA +++ PE +E
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHMTNNKGSA-AWMAPEVFEGSNYSE 182
Query: 681 RDNIYRFGVVLLELVIRKQP----TGPKF 705
+ +++ +G++L E++ R++P GP F
Sbjct: 183 KCDVFSWGIILWEVITRRKPFDEIGGPAF 211
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+N+ KV DFGL+R + D + S + + PPE K + +
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 192
Query: 682 DNIYRFGVVLLEL 694
+I+ FGV++ E+
Sbjct: 193 SDIWAFGVLMWEI 205
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+N+ KV DFGL+R + D + S + + PPE K + +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 186
Query: 682 DNIYRFGVVLLEL 694
+I+ FGV++ E+
Sbjct: 187 SDIWAFGVLMWEI 199
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +DI A N+L++ + K+ DFGL+R + D + ++ I ++ PE R+
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 197
Query: 682 DNIYRFGVVLLELVI 696
+++ FGV + E+++
Sbjct: 198 SDVWMFGVCMWEILM 212
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A N+L++ + KV DFGL+R++ D T I + PE R +
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFS 232
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FGVV+ E++ + ++D++
Sbjct: 233 SASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +DI A N+L++ + K+ DFGL+R + D + ++ I ++ PE R+
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 195
Query: 682 DNIYRFGVVLLELVI 696
+++ FGV + E+++
Sbjct: 196 SDVWMFGVCMWEILM 210
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S D+ + Y+PPE R +E+
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEK 212
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 213 VDLWSLGVLCYEFLVGKPP 231
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKANE 680
V +D+ A N+L++ED AKV DFGL + S + D + + PE R +
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEALREAAFST 184
Query: 681 RDNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+ +++ FG++L E+ + P+ KD+V
Sbjct: 185 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 215
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+N+ KV DFGL+R + D + S + + PPE K + +
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 185
Query: 682 DNIYRFGVVLLEL 694
+I+ FGV++ E+
Sbjct: 186 SDIWAFGVLMWEI 198
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 39/231 (16%)
Query: 364 NNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLT--GR 421
N+K S+P + S + +E L+ N L VF + L+QL KL LSSN L+ G
Sbjct: 15 NSKGLTSVPTGIPSSATRLE--LESNKLQSLPHGVFDK---LTQLTKLSLSSNGLSFKGC 69
Query: 422 IPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTXXXXXXXXXXXXXXXXPEKIADLAQLQ 481
+ S++ L L+ FNG I M L QL+
Sbjct: 70 CSQSDFGTTSLKYLDLS---FNGVITMS----------------------SNFLGLEQLE 104
Query: 482 FLDLSYNNLSRPILSKHSSYFHEVNIP--DLSYSHNYRKFDLSYNMLSG-PIPKELGSCV 538
LD ++NL + +S+ S + N+ D+S++H F+ +N LS + K G+
Sbjct: 105 HLDFQHSNLKQ--MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN-- 160
Query: 539 VVLTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTNLDLSYNEF 589
++P L L+LS +L L PT+F +L+ L L++S+N F
Sbjct: 161 SFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A NIL+N + KV DFG++R++ D T I + PE RK
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 197
Query: 680 ERDNIYRFGVVLLELV 695
+++ +G+V+ E++
Sbjct: 198 SASDVWSYGIVMWEVM 213
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +DI A N+L++ + K+ DFGL+R + D + ++ I ++ PE R+
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 192
Query: 682 DNIYRFGVVLLELVI 696
+++ FGV + E+++
Sbjct: 193 SDVWMFGVCMWEILM 207
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARK 677
+ + +D+ A N L+ E+ KV DFG+ R + D + ST + + PE +
Sbjct: 141 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 200
Query: 678 ANERDNIYRFGVVLLEL 694
+ + +++ FGV++ E+
Sbjct: 201 YSSKSDVWSFGVLMWEV 217
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +DI A N+L++ + K+ DFGL+R + D + ++ I ++ PE R+
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 192
Query: 682 DNIYRFGVVLLELVI 696
+++ FGV + E+++
Sbjct: 193 SDVWMFGVCMWEILM 207
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARK 677
+ + +D+ A N L+ E+ KV DFG+ R + D + ST + + PE +
Sbjct: 124 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 183
Query: 678 ANERDNIYRFGVVLLEL 694
+ + +++ FGV++ E+
Sbjct: 184 YSSKSDVWSFGVLMWEV 200
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A NIL+N + KV DFG++R++ D T I + PE RK
Sbjct: 132 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 191
Query: 680 ERDNIYRFGVVLLELV 695
+++ +G+V+ E++
Sbjct: 192 SASDVWSYGIVMWEVM 207
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S T + + Y+PPE R +E+
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEK 191
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDC----------KSHISTDVASAISYVPP 670
+ +D+K SN+L+N + D KV DFGLAR+I + +S ++ VA+ P
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 671 EYGRARKANERDNIYRFGVVLLELVIRKQPTGPKFEDKD 709
+ K + +++ G +L EL +R+ P F +D
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRR----PIFPGRD 227
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S T + + Y+PPE R +E+
Sbjct: 134 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 191 VDLWSLGVLCYEFLVGKPP 209
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S T + + Y+PPE R +E+
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 186
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +DI A N+L++ + K+ DFGL+R + D + ++ I ++ PE R+
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 194
Query: 682 DNIYRFGVVLLELVI 696
+++ FGV + E+++
Sbjct: 195 SDVWMFGVCMWEILM 209
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +DI A N+L++ + K+ DFGL+R + D + ++ I ++ PE R+
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 189
Query: 682 DNIYRFGVVLLELVI 696
+++ FGV + E+++
Sbjct: 190 SDVWMFGVCMWEILM 204
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+N+ KV DFGL+R + D + S + + PPE K + +
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 181
Query: 682 DNIYRFGVVLLEL 694
+I+ FGV++ E+
Sbjct: 182 SDIWAFGVLMWEI 194
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARK 677
+ + +D+ A N L+ E+ KV DFG+ R + D + ST + + PE +
Sbjct: 122 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 181
Query: 678 ANERDNIYRFGVVLLEL 694
+ + +++ FGV++ E+
Sbjct: 182 YSSKSDVWSFGVLMWEV 198
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDV---ASAISYVPPEYGRA-- 675
+ +D+K SN+L+N + D KV DFGLAR+I + + S + YV + RA
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 676 -----RKANERDNIYRFGVVLLELVIRKQPTGPKFEDKD 709
K + +++ G +L EL +R+ P F +D
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRR----PIFPGRD 227
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S T + + Y+PPE R +E+
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 212
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 213 VDLWSLGVLCYEFLVGKPP 231
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARK 677
+ + +D+ A N L+ E+ KV DFG+ R + D + ST + + PE +
Sbjct: 121 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 180
Query: 678 ANERDNIYRFGVVLLEL 694
+ + +++ FGV++ E+
Sbjct: 181 YSSKSDVWSFGVLMWEV 197
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK N+LL + K+ DFG + S T + + Y+PPE R +E
Sbjct: 126 VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 182
Query: 681 RDNIYRFGVVLLELVIRKQP 700
+ +++ GV+ E ++ K P
Sbjct: 183 KVDLWSLGVLCYEFLVGKPP 202
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK N+LL + K+ DFG + S T + + Y+PPE R +E
Sbjct: 128 VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 184
Query: 681 RDNIYRFGVVLLELVIRKQP 700
+ +++ GV+ E ++ K P
Sbjct: 185 KVDLWSLGVLCYEFLVGKPP 204
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARK 677
+ + +D+ A N L+ E+ KV DFG+ R + D + ST + + PE +
Sbjct: 119 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 178
Query: 678 ANERDNIYRFGVVLLEL 694
+ + +++ FGV++ E+
Sbjct: 179 YSSKSDVWSFGVLMWEV 195
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK N+LL + K+ DFG + S T + + Y+PPE R +E
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXLCGTLDYLPPEMIEGRMHDE 185
Query: 681 RDNIYRFGVVLLELVIRKQP 700
+ +++ GV+ E ++ K P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPP 205
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+N+ KV DFGL+R + D + S + + PPE K + +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSK 186
Query: 682 DNIYRFGVVLLEL 694
+I+ FGV++ E+
Sbjct: 187 SDIWAFGVLMWEI 199
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 25/128 (19%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK N+LL + K+ DFG + S T + + Y+PPE R +E
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 188
Query: 681 RDNIYRFGVVLLELVIRKQP------------------TGPKFED---KDIVVGCVSDNP 719
+ +++ GV+ E ++ K P T P F +D++ + NP
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 248
Query: 720 IAKPGMLR 727
+P MLR
Sbjct: 249 SQRP-MLR 255
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S T + + Y+PPE R +E+
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S T + + Y+PPE R +E+
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L++ D KV DFG+ R + D + S + + PE K + +
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSK 185
Query: 682 DNIYRFGVVLLEL 694
+++ FG+++ E+
Sbjct: 186 SDVWAFGILMWEV 198
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDV---ASAISYVPPEYGRA-- 675
+ +D+K SN+L+N + D KV DFGLAR+I + + S + + +V + RA
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 676 -----RKANERDNIYRFGVVLLELVIRKQPTGPKFEDKD 709
K + +++ G +L EL +R+ P F +D
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRR----PIFPGRD 227
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA----ISYVPPEYGRARK 677
V + + A NIL+N + KV DFGL+R + D S + A I + PE + RK
Sbjct: 131 VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 190
Query: 678 ANERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKP 723
+++ +G+V+ E++ + ++D++ D + P
Sbjct: 191 FTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPP 236
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P A N+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNAMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIKA+N+LL+E + K+ DFG+A ++D + + V + ++ PE + + +
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-WMAPEVIKQSAYDSK 184
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNP 719
+I+ G+ +EL R +P + ++ +NP
Sbjct: 185 ADIWSLGITAIELA-RGEPPHSELHPMKVLFLIPKNNP 221
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +DI A N+L++ + K+ DFGL+R + D + ++ I ++ PE R+
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 572
Query: 682 DNIYRFGVVLLELVIR 697
+++ FGV + E+++
Sbjct: 573 SDVWMFGVCMWEILMH 588
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +DI A N+L++ K+ DFGL+R + D + ++ I ++ PE R+
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 192
Query: 682 DNIYRFGVVLLELVI 696
+++ FGV + E+++
Sbjct: 193 SDVWMFGVCMWEILM 207
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH--ISTDVASAISYVPPEYGR 674
G V +D+ A NIL+ + K+ DFGLA+L+ K + + S I + PE
Sbjct: 144 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 203
Query: 675 ARKANERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNP 719
+ + +++ FGVVL EL + + ++GC D P
Sbjct: 204 DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVP 248
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S T + + Y+PPE R +E+
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S T + + Y+PPE R +E+
Sbjct: 147 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 203
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 204 VDLWSLGVLCYEFLVGKPP 222
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 622 VKKDIKASNILL-----NEDFDAKVL---DFGLARLISDCKSHISTDV--ASAISYVPPE 671
+ +D+K+SNIL+ N D K+L DFGLAR + H +T + A A +++ PE
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYAWMAPE 184
Query: 672 YGRARKANERDNIYRFGVVLLELVIRKQP 700
RA ++ +++ +GV+L EL+ + P
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIKA+N+LL+E + K+ DFG+A ++D + + V + ++ PE + + +
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-WMAPEVIKQSAYDSK 199
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNP 719
+I+ G+ +EL R +P + ++ +NP
Sbjct: 200 ADIWSLGITAIELA-RGEPPHSELHPMKVLFLIPKNNP 236
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH--ISTDVASAISYVPPEYGR 674
G V +D+ A NIL+ + K+ DFGLA+L+ K + + S I + PE
Sbjct: 132 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 191
Query: 675 ARKANERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNP 719
+ + +++ FGVVL EL + + ++GC D P
Sbjct: 192 DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVP 236
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 616 DGKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA 675
DG + +D+K +N+ L+ + K+ DFGLAR+++ S V + Y+ PE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPY-YMSPEQMNR 190
Query: 676 RKANERDNIYRFGVVLLELV 695
NE+ +I+ G +L EL
Sbjct: 191 MSYNEKSDIWSLGCLLYELC 210
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFG+ R + D + ST + + PE + + +
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 682 DNIYRFGVVLLEL 694
+++ FGV++ E+
Sbjct: 185 SDVWSFGVLMWEV 197
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +DI A N+L++ + K+ DFGL+R + D ++ I ++ PE R+
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSA 192
Query: 682 DNIYRFGVVLLELVI 696
+++ FGV + E+++
Sbjct: 193 SDVWMFGVCMWEILM 207
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIKA+N+LL+E D K+ DFG+A ++D + + V + ++ PE + + +
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPF-WMAPEVIKQSAYDFK 196
Query: 682 DNIYRFGVVLLELVIRKQP 700
+I+ G+ +EL + P
Sbjct: 197 ADIWSLGITAIELAKGEPP 215
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEY--GRA 675
+ + V +D+K N+LL+ +AK+ DFGL+ ++SD D + +Y PE GR
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD--GEFLRDSCGSPNYAAPEVISGRL 186
Query: 676 RKANERDNIYRFGVVLLELVIRKQPTGPKFEDKDI 710
E D I+ GV+L L+ P F+D+ +
Sbjct: 187 YAGPEVD-IWSCGVILYALLCGTLP----FDDEHV 216
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+ LN+D D K+ DFGLA I + D+ +Y+ PE + +
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLCGTPNYIAPEVLCKKGHSF 205
Query: 681 RDNIYRFGVVLLELVIRKQP 700
+I+ G +L L++ K P
Sbjct: 206 EVDIWSLGCILYTLLVGKPP 225
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH-ISTDVASAISYVPPEYGRARKAN 679
+ +D+ A N+L+ ED K+ DFGLAR I + +T+ + ++ PE R
Sbjct: 212 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 271
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 272 HQSDVWSFGVLLWEI 286
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 191 SDVWAFGVLLWEIA 204
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+ LN+D D K+ DFGLA I + D+ +Y+ PE + +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLCGTPNYIAPEVLCKKGHSF 221
Query: 681 RDNIYRFGVVLLELVIRKQP 700
+I+ G +L L++ K P
Sbjct: 222 EVDIWSLGCILYTLLVGKPP 241
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 198 SDVWAFGVLLWEIA 211
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 191 SDVWAFGVLLWEIA 204
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +DI A N+L++ K+ DFGL+R + D + ++ I ++ PE R+
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 572
Query: 682 DNIYRFGVVLLELVIR 697
+++ FGV + E+++
Sbjct: 573 SDVWMFGVCMWEILMH 588
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K NILL+++ K+ DFG A+ + D ++ + Y+ PE + N+
Sbjct: 128 IYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYIAPEVVSTKPYNKS 183
Query: 682 DNIYRFGVVLLELVIRKQP 700
+ + FG+++ E++ P
Sbjct: 184 IDWWSFGILIYEMLAGYTP 202
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 193
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 194 SDVWAFGVLLWEIA 207
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS-------------TDVASAISYV 668
+ +D+ + N L+ E+ + V DFGLARL+ D K+ V ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 669 PPEYGRARKANERDNIYRFGVVLLELVIR 697
PE R +E+ +++ FG+VL E++ R
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK N+LL + + K+ DFG + S T + + Y+PPE R +E
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 189
Query: 681 RDNIYRFGVVLLELVIRKQP 700
+ +++ GV+ E ++ P
Sbjct: 190 KVDLWSLGVLCYEFLVGMPP 209
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 198 SDVWAFGVLLWEIA 211
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 193 SDVWAFGVLLWEIA 206
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 198 SDVWAFGVLLWEIA 211
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 195 SDVWAFGVLLWEIA 208
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 198 SDVWAFGVLLWEIA 211
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 193 SDVWAFGVLLWEIA 206
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 616 DGKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA 675
DG + +D+K +N+ L+ + K+ DFGLAR+++ + + Y+ PE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DEDFAKEFVGTPYYMSPEQMNR 190
Query: 676 RKANERDNIYRFGVVLLELV 695
NE+ +I+ G +L EL
Sbjct: 191 MSYNEKSDIWSLGCLLYELC 210
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 193 SDVWAFGVLLWEIA 206
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 196
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 197 SDVWAFGVLLWEIA 210
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 193 SDVWAFGVLLWEIA 206
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARK 677
K + +D+K SNIL+N + K+ DFG++ + D ++ + SY+ PE +
Sbjct: 126 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---EMANEFVGTRSYMSPERLQGTH 182
Query: 678 ANERDNIYRFGVVLLELVIRKQPTGPK--FEDKDIVV 712
+ + +I+ G+ L+E+ + + P P FE D +V
Sbjct: 183 YSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIV 219
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 205
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 206 SDVWAFGVLLWEIA 219
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 198 SDVWAFGVLLWEIA 211
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 193 SDVWAFGVLLWEIA 206
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 193 SDVWAFGVLLWEIA 206
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 195 SDVWAFGVLLWEIA 208
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH-ISTDVASAISYVPPEYGRARKANE 680
V +D+ N L+ + K+ DFG++R I + + I ++PPE RK
Sbjct: 180 VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTT 239
Query: 681 RDNIYRFGVVLLELVIR-KQP 700
+++ FGVVL E+ KQP
Sbjct: 240 ESDVWSFGVVLWEIFTYGKQP 260
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A N+L+ ED K+ DFGLAR I + T + ++ PE R
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 231 HQSDVWSFGVLLWEI 245
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A N+L+ ED K+ DFGLAR I + T + ++ PE R
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 231 HQSDVWSFGVLLWEI 245
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH-ISTDVASAISYVPPEYGRARKAN 679
+ +D+ A N+L+ ED K+ DFGLAR I + +T+ + ++ PE R
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 231 HQSDVWSFGVLLWEI 245
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A N+L+ ED K+ DFGLAR I + T + ++ PE R
Sbjct: 163 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 222
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 223 HQSDVWSFGVLLWEI 237
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 193
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 194 SDVWAFGVLLWEIA 207
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH--ISTDVASAISYVPPEYGR 674
G V +D+ A NIL+ + K+ DFGLA+L+ K + + S I + PE
Sbjct: 131 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 190
Query: 675 ARKANERDNIYRFGVVLLEL 694
+ + +++ FGVVL EL
Sbjct: 191 DNIFSRQSDVWSFGVVLYEL 210
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A N+L+ ED K+ DFGLAR I + T + ++ PE R
Sbjct: 160 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 219
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 220 HQSDVWSFGVLLWEI 234
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-----AISYVPPEYGRAR 676
V +D+ A NIL+N + KV DFGL+R + + S T+ +S I + PE R
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD-PTETSSLGGKIPIRWTAPEAIAFR 198
Query: 677 KANERDNIYRFGVVLLELV 695
K + + +G+V+ E++
Sbjct: 199 KFTSASDAWSYGIVMWEVM 217
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A N+L+ ED K+ DFGLAR I + T + ++ PE R
Sbjct: 156 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 215
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 216 HQSDVWSFGVLLWEI 230
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 194
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 195 SDVWAFGVLLWEIA 208
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A N+L+ ED K+ DFGLAR I + T + ++ PE R
Sbjct: 164 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 223
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 224 HQSDVWSFGVLLWEI 238
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K NILL+E+ K+ DFGL++ D + + + Y+ PE R +
Sbjct: 148 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK-AYSFCGTVEYMAPEVVNRRGHTQS 206
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKD 709
+ + FGV++ E++ P F+ KD
Sbjct: 207 ADWWSFGVLMFEMLTGTLP----FQGKD 230
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGRARKAN 679
+ +D+ A N+LL+ D K+ DFGLA+ + + + D S + + PE + K
Sbjct: 156 IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFY 215
Query: 680 ERDNIYRFGVVLLELV 695
+++ FGV L EL+
Sbjct: 216 YASDVWSFGVTLYELL 231
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR +D ++ VA+ P N+
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMTGYVATRWYRAPEIMLNWMHYNQT 210
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 211 VDIWSVGCIMAELL 224
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR +D ++ VA+ P N+
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMTGYVATRWYRAPEIMLNWMHYNQT 210
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 211 VDIWSVGCIMAELL 224
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K NILL+E+ K+ DFGL++ D + + + Y+ PE R +
Sbjct: 149 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK-AYSFCGTVEYMAPEVVNRRGHTQS 207
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKD 709
+ + FGV++ E++ P F+ KD
Sbjct: 208 ADWWSFGVLMFEMLTGTLP----FQGKD 231
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR +D ++ VA+ P N+
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMTGYVATRWYRAPEIMLNWMHYNQT 210
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 211 VDIWSVGCIMAELL 224
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEY--GRARKAN 679
V +D+K N+LL+E + K+ DFGL+ +++D + + T S +Y PE G+
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNIMTD-GNFLKTSCGSP-NYAAPEVISGKLYAGP 191
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVV 712
E D ++ GV+L ++ R+ P F+D+ I V
Sbjct: 192 EVD-VWSCGVILYVMLCRRLP----FDDESIPV 219
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLARL+ D K + + I ++ E RK
Sbjct: 162 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTH 221
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 222 QSDVWSYGVTIWELM 236
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEY--GRARKAN 679
V +D+K N+LL+E + K+ DFGL+ +++D + + T S +Y PE G+
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSNIMTD-GNFLKTSCGSP-NYAAPEVISGKLYAGP 192
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVV 712
E D ++ GV+L ++ R+ P F+D+ I V
Sbjct: 193 EVD-VWSCGVILYVMLCRRLP----FDDESIPV 220
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 191 SDVWAFGVLLWEIA 204
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH--ISTDVASAISYVPPEYGR 674
G V +D+ A NIL+ + K+ DFGLA+L+ K + S I + PE
Sbjct: 128 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLS 187
Query: 675 ARKANERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNP 719
+ + +++ FGVVL EL + + ++GC D P
Sbjct: 188 DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVP 232
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGXVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEY--GRARKAN 679
V +D+K N+LL+E + K+ DFGL+ +++D + + T S +Y PE G+
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSNIMTD-GNFLKTSCGSP-NYAAPEVISGKLYAGP 186
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVV 712
E D ++ GV+L ++ R+ P F+D+ I V
Sbjct: 187 EVD-VWSCGVILYVMLCRRLP----FDDESIPV 214
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARK 677
K + +D+K SNIL+N + K+ DFG++ + D ++ SY+ PE +
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTH 179
Query: 678 ANERDNIYRFGVVLLELVIRKQPT-GPKFEDKDIVVGC 714
+ + +I+ G+ L+E+ + + P P ++ +++ GC
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 217
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHI-----STDVASAISYVPPEYGRA 675
+ +D+ A N+L+ ED K+ DFGLAR I HI +T+ + ++ PE
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDXXKKTTNGRLPVKWMAPEALFD 226
Query: 676 RKANERDNIYRFGVVLLEL 694
R + +++ FGV+L E+
Sbjct: 227 RIYTHQSDVWSFGVLLWEI 245
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARK 677
K + +D+K SNIL+N + K+ DFG++ + D ++ SY+ PE +
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTH 179
Query: 678 ANERDNIYRFGVVLLELVIRKQPT-GPKFEDKDIVVGC 714
+ + +I+ G+ L+E+ + + P P ++ +++ GC
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 217
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEY--GRA 675
+ + V +D+K N+LL+ +AK+ DFGL+ ++SD + T S +Y PE GR
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD-GEFLRTSCGSP-NYAAPEVISGRL 186
Query: 676 RKANERDNIYRFGVVLLELVIRKQPTGPKFEDKDI 710
E D I+ GV+L L+ P F+D+ +
Sbjct: 187 YAGPEVD-IWSCGVILYALLCGTLP----FDDEHV 216
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S + + Y+PPE R +E+
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 189
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIST-DVASAISYVPPEYGRARKAN 679
+ +D+ A NILL+E K+ DFGLAR I ++ D + ++ PE R
Sbjct: 206 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 265
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 266 IQSDVWSFGVLLWEI 280
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNIL+N + K+ DFG++ + D ++ SY+ PE + + +
Sbjct: 189 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQ 245
Query: 682 DNIYRFGVVLLELVIRKQPT-GPKFEDKDIVVGC 714
+I+ G+ L+E+ + + P P ++ +++ GC
Sbjct: 246 SDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 279
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH-ISTDVASAISYVPPEYGRARKANE 680
V +D+ N L+ + K+ DFG++R I + + I ++PPE RK
Sbjct: 157 VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTT 216
Query: 681 RDNIYRFGVVLLELVIR-KQP 700
+++ FGVVL E+ KQP
Sbjct: 217 ESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH-ISTDVASAISYVPPEYGRARKANE 680
V +D+ N L+ + K+ DFG++R I + + I ++PPE RK
Sbjct: 151 VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTT 210
Query: 681 RDNIYRFGVVLLELVIR-KQP 700
+++ FGVVL E+ KQP
Sbjct: 211 ESDVWSFGVVLWEIFTYGKQP 231
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEY--GRARKAN 679
V +D+K N+LL+E + K+ DFGL+ +++D + + T S +Y PE G+
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSNIMTD-GNFLKTSCGSP-NYAAPEVISGKLYAGP 182
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVV 712
E D ++ GV+L ++ R+ P F+D+ I V
Sbjct: 183 EVD-VWSCGVILYVMLCRRLP----FDDESIPV 210
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARK 677
K + +D+K SNIL+N + K+ DFG++ + D ++ SY+ PE +
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTH 179
Query: 678 ANERDNIYRFGVVLLELVIRKQPT-GPKFEDKDIVVGCVSDNPIAK 722
+ + +I+ G+ L+E+ + + P P ++ +++ GC + A+
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARK 677
K + +D+K SNIL+N + K+ DFG++ + D ++ SY+ PE +
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTH 179
Query: 678 ANERDNIYRFGVVLLELVIRKQPT-GPKFEDKDIVVGCVSDNPIAK 722
+ + +I+ G+ L+E+ + + P P ++ +++ GC + A+
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 25/128 (19%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK N+LL + K+ +FG + S T + + Y+PPE R +E
Sbjct: 132 VIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 188
Query: 681 RDNIYRFGVVLLELVIRKQP------------------TGPKFED---KDIVVGCVSDNP 719
+ +++ GV+ E ++ K P T P F +D++ + NP
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 248
Query: 720 IAKPGMLR 727
+P MLR
Sbjct: 249 SQRP-MLR 255
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K NILL+E+ K+ DFGL++ D + + + Y+ PE R +
Sbjct: 148 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK-AYSFCGTVEYMAPEVVNRRGHTQS 206
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKD 709
+ + FGV++ E++ P F+ KD
Sbjct: 207 ADWWSFGVLMFEMLTGTLP----FQGKD 230
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARK 677
K + +D+K SNIL+N + K+ DFG++ + D ++ SY+ PE +
Sbjct: 150 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTH 206
Query: 678 ANERDNIYRFGVVLLELVIRKQPT-GPKFEDKDIVVGCVSDNPIAK 722
+ + +I+ G+ L+E+ + + P P ++ +++ GC + A+
Sbjct: 207 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 252
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIST-DVASAISYVPPEYGRARKAN 679
+ +D+ A NILL+E K+ DFGLAR I ++ D + ++ PE R
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 219
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 220 IQSDVWSFGVLLWEI 234
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLARL+ D K + + I ++ E RK
Sbjct: 139 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTH 198
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 199 QSDVWSYGVTIWELM 213
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIST-DVASAISYVPPEYGRARKAN 679
+ +D+ A NILL+E K+ DFGLAR I ++ D + ++ PE R
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 228
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 229 IQSDVWSFGVLLWEI 243
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S + + Y+PPE R +E+
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S + + Y+PPE R +E+
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIST-DVASAISYVPPEYGRARKAN 679
+ +D+ A NILL+E K+ DFGLAR I ++ D + ++ PE R
Sbjct: 171 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 230
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 231 IQSDVWSFGVLLWEI 245
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIST-DVASAISYVPPEYGRARKAN 679
+ +D+ A NILL+E K+ DFGLAR I ++ D + ++ PE R
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 219
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 220 IQSDVWSFGVLLWEI 234
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 226
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 227 VDIWSVGCIMAELL 240
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 223
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 224 VDIWSVGCIMAELL 237
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK N+LL + K+ DFG + S + + Y+PPE R +E
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDE 185
Query: 681 RDNIYRFGVVLLELVIRKQP 700
+ +++ GV+ E ++ K P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPP 205
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 210 VDIWSVGCIMAELL 223
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 166 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 222
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 223 VDIWSVGCIMAELL 236
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH-ISTDVASAISYVPPEYGRARKANE 680
V +D+ N L+ E+ K+ DFG++R + + + I ++PPE RK
Sbjct: 150 VHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTT 209
Query: 681 RDNIYRFGVVLLELVIR-KQP 700
+++ GVVL E+ KQP
Sbjct: 210 ESDVWSLGVVLWEIFTYGKQP 230
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 223
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 224 VDIWSVGCIMAELL 237
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 215
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 216 VDIWSVGCIMAELL 229
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 158 IHRDLKPSNLAVNEDXELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 214
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 215 VDIWSVGCIMAELL 228
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 158 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 214
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 215 VDIWSVGCIMAELL 228
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ +FG + S T + + Y+PPE R +E+
Sbjct: 132 IHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 188
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 189 VDLWSLGVLCYEFLVGKPP 207
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 215
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 216 VDIWSVGCIMAELL 229
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 215
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 216 VDIWSVGCIMAELL 229
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIST-DVASAISYVPPEYGRARKANE 680
+ +D+ A NILL+E K+ DFGLAR I ++ D + ++ PE R
Sbjct: 166 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 225
Query: 681 RDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 226 QSDVWSFGVLLWEI 239
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 205
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 206 VDIWSVGCIMAELL 219
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIST-DVASAISYVPPEYGRARKANE 680
+ +D+ A NILL+E K+ DFGLAR I ++ D + ++ PE R
Sbjct: 166 IHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 225
Query: 681 RDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 226 QSDVWSFGVLLWEI 239
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCK-SHISTDVASAISYVPPEYGRARKANE 680
+ +D+K++NI L+E K+ DFGLA + S S ++ ++ PE R + N
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP 213
Query: 681 ---RDNIYRFGVVLLELVIRKQP 700
+ ++Y +G+VL EL+ + P
Sbjct: 214 FSFQSDVYSYGIVLYELMTGELP 236
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 166 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 222
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 223 VDIWSVGCIMAELL 236
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 152 IHRDLKPSNLAVNEDXELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 208
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 209 VDIWSVGCIMAELL 222
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAI----SYVPPEYGRARKAN 679
+DIK+ NI L +D ++ DFG+AR+++ + ++A A Y+ PE + N
Sbjct: 149 RDIKSQNIFLTKDGTVQLGDFGIARVLNS-----TVELARACIGTPYYLSPEICENKPYN 203
Query: 680 ERDNIYRFGVVLLELVIRKQ 699
+ +I+ G VL EL K
Sbjct: 204 NKSDIWALGCVLYELCTLKH 223
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 205
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 206 VDIWSVGCIMAELL 219
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
V +DI NIL+ K+ DFGL+R I D + ++ I ++ PE R+
Sbjct: 146 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTT 205
Query: 681 RDNIYRFGVVLLELV-IRKQPTGPKFEDKDIV 711
+++ F V + E++ KQP E+KD++
Sbjct: 206 ASDVWMFAVCMWEILSFGKQPFF-WLENKDVI 236
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
V +DI NIL+ K+ DFGL+R I D + ++ I ++ PE R+
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTT 193
Query: 681 RDNIYRFGVVLLELV-IRKQPTGPKFEDKDIV 711
+++ F V + E++ KQP E+KD++
Sbjct: 194 ASDVWMFAVCMWEILSFGKQPFF-WLENKDVI 224
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 152 IHRDLKPSNLAVNEDXELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 208
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 209 VDIWSVGCIMAELL 222
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 152 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 208
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 209 VDIWSVGCIMAELL 222
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 205
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 206 VDIWSVGCIMAELL 219
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARK 677
K + +D+K SNIL+N + K+ DFG++ + D ++ SY+ PE +
Sbjct: 142 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTH 198
Query: 678 ANERDNIYRFGVVLLELVIRKQPTG 702
+ + +I+ G+ L+E+ + + P G
Sbjct: 199 YSVQSDIWSMGLSLVEMAVGRYPIG 223
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 152 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 208
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 209 VDIWSVGCIMAELL 222
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 146 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 202
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 203 VDIWSVGCIMAELL 216
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 210 VDIWSVGCIMAELL 223
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 145 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 201
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 202 VDIWSVGCIMAELL 215
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 199
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 200 VDIWSVGCIMAELL 213
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 144 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 200
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 201 VDIWSVGCIMAELL 214
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 25/128 (19%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK N+LL + K+ DFG + S + + Y+PPE R +E
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDE 188
Query: 681 RDNIYRFGVVLLELVIRKQP------------------TGPKFED---KDIVVGCVSDNP 719
+ +++ GV+ E ++ K P T P F +D++ + NP
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 248
Query: 720 IAKPGMLR 727
+P MLR
Sbjct: 249 SQRP-MLR 255
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 210
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 211 VDIWSVGCIMAELL 224
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D + VA+ P N+
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMXGXVATRWYRAPEIMLNWMHYNQT 223
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 224 VDIWSVGCIMAELL 237
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDXELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 210 VDIWSVGCIMAELL 223
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 144 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 200
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 201 VDIWSVGCIMAELL 214
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S + + Y+PPE R +E+
Sbjct: 132 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 188
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 189 VDLWSLGVLCYEFLVGKPP 207
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIST-DVASAISYVPPEYGRARKAN 679
+ +D+ A NILL+E K+ DFGLAR I ++ D + ++ PE R
Sbjct: 214 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 273
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 274 IQSDVWSFGVLLWEI 288
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 199
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 200 VDIWSVGCIMAELL 213
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 157 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 213
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 214 VDIWSVGCIMAELL 227
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
V +DI NIL+ K+ DFGL+R I D + ++ I ++ PE R+
Sbjct: 130 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTT 189
Query: 681 RDNIYRFGVVLLELV-IRKQPTGPKFEDKDIV 711
+++ F V + E++ KQP E+KD++
Sbjct: 190 ASDVWMFAVCMWEILSFGKQPFF-WLENKDVI 220
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIST-DVASAISYVPPEYGRARKAN 679
+ +D+ A NILL+E K+ DFGLAR I ++ D + ++ PE R
Sbjct: 219 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 278
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 279 IQSDVWSFGVLLWEI 293
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI----SDCKSHISTDVASAISYVPPEYGRARK 677
V +D+ A NIL+N + KV DFGL+R + SD S I + PE RK
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRK 197
Query: 678 ANERDNIYRFGVVLLELV 695
+ + +G+V+ E++
Sbjct: 198 FTSASDAWSYGIVMWEVM 215
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNIL+N + K+ DFG++ + D ++ SY+ PE + + +
Sbjct: 137 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMAPERLQGTHYSVQ 193
Query: 682 DNIYRFGVVLLELVIRKQPTGP 703
+I+ G+ L+EL + + P P
Sbjct: 194 SDIWSMGLSLVELAVGRYPIPP 215
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIST-DVASAISYVPPEYGRARKAN 679
+ +D+ A NILL+E K+ DFGLAR I ++ D + ++ PE R
Sbjct: 212 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 271
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 272 IQSDVWSFGVLLWEI 286
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S + + Y+PPE R +E+
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEK 187
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 188 VDLWSLGVLCYEFLVGKPP 206
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+ A N L+ E+ KV DFGL+RL++ I + PE + +
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIK 211
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 212 SDVWAFGVLLWEIA 225
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH--ISTDVASAISYVPPEYGRARKAN 679
+ +++ A N+LL+ D K+ DFGLA+ + + + + D S + + PE + K
Sbjct: 139 IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFY 198
Query: 680 ERDNIYRFGVVLLELV 695
+++ FGV L EL+
Sbjct: 199 YASDVWSFGVTLYELL 214
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +++ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 396
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 397 SDVWAFGVLLWEIA 410
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIST-DVASAISYVPPEYGRARKAN 679
+ +D+ A NILL+E K+ DFGLAR I ++ D + ++ PE R
Sbjct: 221 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 280
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 281 IQSDVWSFGVLLWEI 295
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 199
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 200 VDIWSVGCIMAELL 213
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 153 IHRDLKPSNLAVNEDSELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 210 VDIWSVGCIMAELL 223
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMAGFVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH--ISTDVASAISYVPPEYGRARKAN 679
+ +++ A N+LL+ D K+ DFGLA+ + + + + D S + + PE + K
Sbjct: 139 IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFY 198
Query: 680 ERDNIYRFGVVLLELV 695
+++ FGV L EL+
Sbjct: 199 YASDVWSFGVTLYELL 214
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +++ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 438
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 439 SDVWAFGVLLWEIA 452
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMAGFVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 149 IHRDLKPSNLAVNEDSELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 205
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 206 VDIWSVGCIMAELL 219
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N+
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMAGFVATRWYRAPEIMLNWMHYNQT 199
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 200 VDIWSVGCIMAELL 213
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK N+LL + K+ DFG + S + + Y+PPE R +E+
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEK 191
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ GV+ E ++ K P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH-ISTDVASAISYVPPEYGRARKANE 680
V +D+ N L+ + K+ DFG++R + + + I ++PPE RK
Sbjct: 155 VHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTT 214
Query: 681 RDNIYRFGVVLLELVIR-KQP 700
+++ FGV+L E+ KQP
Sbjct: 215 ESDVWSFGVILWEIFTYGKQP 235
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +++ A N L+ E+ KV DFGL+RL++ I + PE K + +
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 399
Query: 682 DNIYRFGVVLLELV 695
+++ FGV+L E+
Sbjct: 400 SDVWAFGVLLWEIA 413
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARK 677
K + +D+K SNIL+N + K+ DFG++ + D ++ SY+ PE +
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTH 179
Query: 678 ANERDNIYRFGVVLLELVIRKQPTGPKFEDKD 709
+ + +I+ G+ L+E+ + + P P +D
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKED 211
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIST-DVASAISYVPPEYGRARKAN 679
+ +D+ A NILL+E K+ DFGLAR I + D + ++ PE R
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYT 228
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 229 IQSDVWSFGVLLWEI 243
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLA-RLISD--------CKSHISTDVASAISYV 668
K + +D+K SNILL+E K+ DFG++ RL+ D C ++++ +
Sbjct: 143 KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPT 202
Query: 669 PPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKPGML 726
P+Y + R +++ G+ L+EL + P D +++ + + P PG +
Sbjct: 203 KPDY------DIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHM 254
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D + VA+ P N+
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMXGYVATRWYRAPEIMLNWMHYNQT 226
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 227 VDIWSVGCIMAELL 240
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIST-DVASAISYVPPEYGRARKAN 679
+ +D+ A NILL+E K+ DFGLAR I + D + ++ PE R
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYT 219
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 220 IQSDVWSFGVLLWEI 234
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIST-DVASAISYVPPEYGRARKAN 679
+ +D+ A NILL+E K+ DFGLAR I + D + ++ PE R
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYT 219
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 220 IQSDVWSFGVLLWEI 234
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIST-DVASAISYVPPEYGRARKAN 679
+ +D+ A NILL+E K+ DFGLAR I + D + ++ PE R
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYT 228
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 229 IQSDVWSFGVLLWEI 243
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIST-DVASAISYVPPEYGRARKANE 680
+ +D+ A NILL+E K+ DFGLAR I + D + ++ PE R
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 681 RDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 230 QSDVWSFGVLLWEI 243
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIKA NILLN + AK+ DFG+A ++D + + + + ++ PE + N
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPF-WMAPEVIQEIGYNCV 205
Query: 682 DNIYRFGVVLLELVIRKQP 700
+I+ G+ +E+ K P
Sbjct: 206 ADIWSLGITAIEMAEGKPP 224
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A N+L+ E+ K+ DFGLAR I++ + +T + ++ PE R
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYT 237
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV++ E+
Sbjct: 238 HQSDVWSFGVLMWEI 252
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIST-DVASAISYVPPEYGRARKAN 679
+ +D+ A NILL+E+ K+ DFGLAR I ++ D + ++ PE + +
Sbjct: 220 CIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYS 279
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ +GV+L E+
Sbjct: 280 TKSDVWSYGVLLWEI 294
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A N+L+ E+ K+ DFGLAR I++ + T + ++ PE R
Sbjct: 165 CIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 224
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV++ E+
Sbjct: 225 HQSDVWSFGVLMWEI 239
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEY--GRARKAN 679
+ +D+K SNI++ D K+LDFGLAR + C + + T Y PE G AN
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLAR--TACTNFMMTPYVVTRYYRAPEVILGMGYAAN 205
Query: 680 ERDNIYRFGVVLLELV 695
+I+ G ++ ELV
Sbjct: 206 V--DIWSVGCIMGELV 219
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A N+L+ E+ K+ DFGLAR I++ + T + ++ PE R
Sbjct: 167 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 226
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV++ E+
Sbjct: 227 HQSDVWSFGVLMWEI 241
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLAR-LISDCKSHISTDVASAISYVPPEYGRARKAN 679
+ +D+ A NILL+E K+ DFGLAR + D D + ++ PE R
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYT 228
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV+L E+
Sbjct: 229 IQSDVWSFGVLLWEI 243
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A N+L+ E+ K+ DFGLAR I++ + T + ++ PE R
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV++ E+
Sbjct: 238 HQSDVWSFGVLMWEI 252
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A N+L+ E+ K+ DFGLAR I++ + T + ++ PE R
Sbjct: 224 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 283
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV++ E+
Sbjct: 284 HQSDVWSFGVLMWEI 298
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A N+L+ E+ K+ DFGLAR I++ + T + ++ PE R
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV++ E+
Sbjct: 238 HQSDVWSFGVLMWEI 252
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 165 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 225 YTKSIDIWSVGCILAEML 242
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A N+L+ E+ K+ DFGLAR I++ + T + ++ PE R
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV++ E+
Sbjct: 238 HQSDVWSFGVLMWEI 252
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 165 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 225 YTKSIDIWSVGCILAEML 242
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A N+L+ E+ K+ DFGLAR I++ + T + ++ PE R
Sbjct: 170 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 229
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV++ E+
Sbjct: 230 HQSDVWSFGVLMWEI 244
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A N+L+ E+ K+ DFGLAR I++ + T + ++ PE R
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV++ E+
Sbjct: 238 HQSDVWSFGVLMWEI 252
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGLAR D ++ VA+ P N
Sbjct: 176 IHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNMT 232
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 233 VDIWSVGCIMAELL 246
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LD+GLAR D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDYGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A N+L+ E+ K+ DFGLAR I++ + T + ++ PE R
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV++ E+
Sbjct: 238 HQSDVWSFGVLMWEI 252
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A N+LL AK+ DFGL++ + S+ + A + + PE RK +
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVV 712
R +++ +GV + E + Q K + +++
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA 224
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIST-DVASAISYVPPEYGRARKANE 680
V +D+ N L+ E+ K+ DFGL+R I + + + A I ++PPE +
Sbjct: 196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTT 255
Query: 681 RDNIYRFGVVLLEL 694
+++ +GVVL E+
Sbjct: 256 ESDVWAYGVVLWEI 269
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 209 YTKSIDIWSVGCILAEML 226
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 203 YTKSIDIWSVGCILAEML 220
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 203 YTKSIDIWSVGCILAEML 220
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+ LN+D D K+ DFGLA I + + +Y+ PE + +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKTLCGTPNYIAPEVLCKKGHSF 221
Query: 681 RDNIYRFGVVLLELVIRKQP 700
+I+ G +L L++ K P
Sbjct: 222 EVDIWSLGCILYTLLVGKPP 241
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 209 YTKSIDIWSVGCILAEML 226
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 205 YTKSIDIWSVGCILAEML 222
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 209
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 210 YTKSIDIWSVGCILAEML 227
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 210
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 211 YTKSIDIWSVGCILAEML 228
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 201
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 202 YTKSIDIWSVGCILAEML 219
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 209 YTKSIDIWSVGCILAEML 226
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 209 YTKSIDIWSVGCILAEML 226
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 205 YTKSIDIWSVGCILAEML 222
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 207 YTKSIDIWSVGCILAEML 224
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 153 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 212
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 213 YTKSIDIWSVGCILAEML 230
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 205 YTKSIDIWSVGCILAEML 222
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 207 YTKSIDIWSVGCILAEML 224
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 209 YTKSIDIWSVGCILAEML 226
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK N+LL + + K+ DFG + S + + Y+PPE R +E
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRMHDE 189
Query: 681 RDNIYRFGVVLLELVIRKQP 700
+ +++ GV+ E ++ P
Sbjct: 190 KVDLWSLGVLCYEFLVGMPP 209
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 205 YTKSIDIWSVGCILAEML 222
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK+ NILL D K+ DFG I+ +S ST V + ++ PE + +
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPY-WMAPEVVTRKAYGPK 196
Query: 682 DNIYRFGVVLLELVIRKQP 700
+I+ G++ +E++ + P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISD----CKSHISTDVASAISYVPPEY-GRAR 676
+ +D+KA NILL ED ++ DFG++ ++ ++ + ++ PE + R
Sbjct: 138 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR 197
Query: 677 KANERDNIYRFGVVLLELVIRKQP 700
+ + +I+ FG+ +EL P
Sbjct: 198 GYDFKADIWSFGITAIELATGAAP 221
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 205 YTKSIDIWSVGCILAEML 222
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+ LN+D D K+ DFGLA I + + +Y+ PE + +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKXLCGTPNYIAPEVLCKKGHSF 221
Query: 681 RDNIYRFGVVLLELVIRKQP 700
+I+ G +L L++ K P
Sbjct: 222 EVDIWSLGCILYTLLVGKPP 241
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISD----CKSHISTDVASAISYVPPEY-GRAR 676
+ +D+KA NILL ED ++ DFG++ ++ ++ + ++ PE + R
Sbjct: 143 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR 202
Query: 677 KANERDNIYRFGVVLLELVIRKQP 700
+ + +I+ FG+ +EL P
Sbjct: 203 GYDFKADIWSFGITAIELATGAAP 226
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH--ISTDVASAISYVPPEYGRARKAN 679
+ + + A N+LL+ D K+ DFGLA+ + + + + D S + + PE + K
Sbjct: 134 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 193
Query: 680 ERDNIYRFGVVLLELV 695
+++ FGV L EL+
Sbjct: 194 YASDVWSFGVTLYELL 209
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH--ISTDVASAISYVPPEYGRARKAN 679
+ + + A N+LL+ D K+ DFGLA+ + + + + D S + + PE + K
Sbjct: 133 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 192
Query: 680 ERDNIYRFGVVLLELV 695
+++ FGV L EL+
Sbjct: 193 YASDVWSFGVTLYELL 208
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEY--GRARKAN 679
+ +DIK NI++ EDF K++DFG A + + + I Y PE G +
Sbjct: 152 IHRDIKDENIVIAEDFTIKLIDFGSAAYLE--RGKLFYTFCGTIEYCAPEVLMGNPYRGP 209
Query: 680 ERDNIYRFGVVLLELVIRKQP 700
E + ++ GV L LV + P
Sbjct: 210 ELE-MWSLGVTLYTLVFEENP 229
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCK-SHISTDVASAISYVPPEYGRARKAN 679
+ +D+ A N+L+ E+ K+ DFGLAR I++ +T+ + ++ PE R
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV++ E+
Sbjct: 238 HQSDVWSFGVLMWEI 252
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+L+N D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 165 VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKG 224
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 225 YTKSIDIWSVGCILAEML 242
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + ++LDFGLAR ++ VA+ P N+
Sbjct: 145 IHRDLKPSNVAVNEDCELRILDFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQT 201
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 202 VDIWSVGCIMAELL 215
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKA 678
+ +D+K SN+LLN D K+ DFGLAR+ H T+ + Y PE K
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 679 NERD-NIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 207 YTKSIDIWSVGCILAEML 224
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCK-SHISTDVASAISYVPPEYGRARKAN 679
+ +D+ A N+L+ E+ K+ DFGLAR I++ +T+ + ++ PE R
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV++ E+
Sbjct: 238 HQSDVWSFGVLMWEI 252
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPP 670
+ +D+K +N LLN+D K+ DFGLAR I SD HI D+ P
Sbjct: 153 IHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEP 202
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + ++LDFGLAR ++ VA+ P N+
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 210 VDIWSVGCIMAELL 223
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + ++LDFGLAR ++ VA+ P N+
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 210 VDIWSVGCIMAELL 223
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+ LNED + K+ DFGLA + + + +Y+ PE + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 681 RDNIYRFGVVLLELVIRKQP 700
+++ G ++ L++ K P
Sbjct: 197 EVDVWSIGCIMYTLLVGKPP 216
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR + S + T Y PE E
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 682 DNIYRFGVVLLELV 695
+I+ GV++ E++
Sbjct: 206 VDIWSVGVIMGEMI 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR + S + T Y PE E
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 682 DNIYRFGVVLLELV 695
+I+ GV++ E++
Sbjct: 206 VDIWSVGVIMGEMI 219
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+D+K NIL++ D A ++DFG+A +D K + + Y PE A R
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 682 DNIYRFGVVLLELVIRKQPTG-PKFE-DKDIVVGCVSDNPIAKPGMLR 727
+IY VL E + TG P ++ D+ V G + I +P +R
Sbjct: 216 ADIYALTCVLYECL-----TGSPPYQGDQLSVXGAHINQAIPRPSTVR 258
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A N+L+ E+ ++ DFGLAR I++ + T + ++ PE R
Sbjct: 178 CIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ FGV++ E+
Sbjct: 238 HQSDVWSFGVLMWEI 252
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+ LNED + K+ DFGLA + + + +Y+ PE + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 681 RDNIYRFGVVLLELVIRKQP 700
+++ G ++ L++ K P
Sbjct: 197 EVDVWSIGCIMYTLLVGKPP 216
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 26/134 (19%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA-ISYVPPEYGRARKANE 680
+ +D+ A N +L +D V DFGL++ I + +A + ++ E R
Sbjct: 169 LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTS 228
Query: 681 RDNIYRFGVVLLELVIR-----------------------KQPTGPKFEDKDIVVGCVSD 717
+ +++ FGV + E+ R KQP E +I+ C
Sbjct: 229 KSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRT 288
Query: 718 NPIAKP--GMLRVQ 729
+P+ +P +LR+Q
Sbjct: 289 DPLDRPTFSVLRLQ 302
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + T Y PE E
Sbjct: 186 IHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKEN 243
Query: 682 DNIYRFGVVLLELVIRK 698
+I+ G ++ E+V K
Sbjct: 244 VDIWSVGCIMGEMVRHK 260
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDFGL R D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDSELKILDFGLCRHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+ LNED + K+ DFGLA + + + +Y+ PE + +
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVLSKKGHSF 200
Query: 681 RDNIYRFGVVLLELVIRKQP 700
+++ G ++ L++ K P
Sbjct: 201 EVDVWSIGCIMYTLLVGKPP 220
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH--ISTDVASAISYVPPEYGR 674
G V +D+ A N+L+ + K+ DFGL + I K + D S + + PE
Sbjct: 131 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 675 ARKANERDNIYRFGVVLLELV 695
K +++ FGV L EL+
Sbjct: 191 QSKFYIASDVWSFGVTLHELL 211
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA-SAISYVPPEYGRARKANE 680
V +D+ A N ++ EDF K+ DFG+ R I + + + ++ PE +
Sbjct: 147 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 206
Query: 681 RDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 207 YSDVWSFGVVLWEIATLAEQP 227
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH--ISTDVASAISYVPPEYGR 674
G V +D+ A N+L+ + K+ DFGL + I K + D S + + PE
Sbjct: 143 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 675 ARKANERDNIYRFGVVLLELV 695
K +++ FGV L EL+
Sbjct: 203 QSKFYIASDVWSFGVTLHELL 223
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + T Y PE E
Sbjct: 153 IHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKEN 210
Query: 682 DNIYRFGVVLLELVIRK 698
+++ G ++ E+V K
Sbjct: 211 VDLWSVGCIMGEMVCHK 227
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + + T Y PE E
Sbjct: 146 IHRDLKPSNIVVKSDCTLKILDFGLARTAS--TNFMMTPYVVTRYYRAPEVILGMGYKEN 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ ELV
Sbjct: 204 VDIWSVGCIMGELV 217
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + T Y PE E
Sbjct: 186 IHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKEN 243
Query: 682 DNIYRFGVVLLELVIRK 698
+I+ G ++ E+V K
Sbjct: 244 VDIWSVGCIMGEMVRHK 260
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA-SAISYVPPEYGRARKANE 680
V +D+ A N ++ EDF K+ DFG+ R I + + + ++ PE +
Sbjct: 154 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 213
Query: 681 RDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 214 YSDVWSFGVVLWEIATLAEQP 234
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLA----RLISDCKSHISTDVASAISYVPPEYGRARK 677
+ +D+KA NIL D D K+ DFG++ R I S I T A V E + R
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 678 ANERDNIYRFGVVLLELVIRKQP 700
+ + +++ G+ L+E+ + P
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPP 239
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + T Y PE E
Sbjct: 149 IHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKEN 206
Query: 682 DNIYRFGVVLLELVIRK 698
+I+ G ++ E+V K
Sbjct: 207 VDIWSVGCIMGEMVRHK 223
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLA----RLISDCKSHISTDVASAISYVPPEYGRARK 677
+ +D+KA NIL D D K+ DFG++ R I S I T A V E + R
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 678 ANERDNIYRFGVVLLELVIRKQP 700
+ + +++ G+ L+E+ + P
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPP 239
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + T Y PE E
Sbjct: 141 IHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKEN 198
Query: 682 DNIYRFGVVLLELVIRK 698
+I+ G ++ E+V K
Sbjct: 199 VDIWSVGCIMGEMVRHK 215
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + T Y PE E
Sbjct: 142 IHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKEN 199
Query: 682 DNIYRFGVVLLELVIRK 698
+I+ G ++ E+V K
Sbjct: 200 VDIWSVGCIMGEMVRHK 216
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + T Y PE E
Sbjct: 142 IHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKEN 199
Query: 682 DNIYRFGVVLLELVIRK 698
+I+ G ++ E+V K
Sbjct: 200 VDIWSVGCIMGEMVRHK 216
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA-SAISYVPPEYGRARKANE 680
V +D+ A N ++ EDF K+ DFG+ R I + + + ++ PE +
Sbjct: 153 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 212
Query: 681 RDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 213 YSDVWSFGVVLWEIATLAEQP 233
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR + S + T Y PE E
Sbjct: 141 IHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 198
Query: 682 DNIYRFGVVLLELVIRK 698
+I+ G ++ E+V K
Sbjct: 199 VDIWSVGCIMGEMVRHK 215
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR + S + T Y PE E
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 682 DNIYRFGVVLLELVIRK 698
+I+ G ++ E+V K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR + S + T Y PE E
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 682 DNIYRFGVVLLELVIRK 698
+I+ G ++ E+V K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + T Y PE E
Sbjct: 149 IHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKEN 206
Query: 682 DNIYRFGVVLLELVIRK 698
+I+ G ++ E+V K
Sbjct: 207 VDIWSVGCIMGEMVRHK 223
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + T Y PE E
Sbjct: 142 IHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKEN 199
Query: 682 DNIYRFGVVLLELVIRK 698
+++ G ++ E+V K
Sbjct: 200 VDLWSVGCIMGEMVCHK 216
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA-SAISYVPPEYGRARKANE 680
V +D+ A N ++ EDF K+ DFG+ R I + + + ++ PE +
Sbjct: 151 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 210
Query: 681 RDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 211 YSDVWSFGVVLWEIATLAEQP 231
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA-SAISYVPPEYGRARKANE 680
V +D+ A N ++ EDF K+ DFG+ R I + + + ++ PE +
Sbjct: 182 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 241
Query: 681 RDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 242 YSDVWSFGVVLWEIATLAEQP 262
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + T Y PE E
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 682 DNIYRFGVVLLELVIRK 698
+I+ G ++ E+V K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + T Y PE E
Sbjct: 147 IHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKEN 204
Query: 682 DNIYRFGVVLLELVIRK 698
+I+ G ++ E+V K
Sbjct: 205 VDIWSVGCIMGEMVRHK 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR + S + T Y PE E
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 682 DNIYRFGVVLLELVIRK 698
+I+ G ++ E+V K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR + S + T Y PE E
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 682 DNIYRFGVVLLELVIRK 698
+I+ G ++ E+V K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA-SAISYVPPEYGRARKANE 680
V +D+ A N ++ EDF K+ DFG+ R I + + + ++ PE +
Sbjct: 153 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 212
Query: 681 RDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 213 YSDVWSFGVVLWEIATLAEQP 233
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA-SAISYVPPEYGRARKANE 680
V +D+ A N ++ EDF K+ DFG+ R I + + + ++ PE +
Sbjct: 150 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 209
Query: 681 RDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 210 YSDVWSFGVVLWEIATLAEQP 230
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + T Y PE E
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 682 DNIYRFGVVLLELVIRK 698
+I+ G ++ E+V K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA-SAISYVPPEYGRARKANE 680
V +D+ A N ++ EDF K+ DFG+ R I + + + ++ PE +
Sbjct: 160 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 219
Query: 681 RDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 220 YSDVWSFGVVLWEIATLAEQP 240
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA-SAISYVPPEYGRARKANE 680
V +D+ A N ++ EDF K+ DFG+ R I + + + ++ PE +
Sbjct: 160 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 219
Query: 681 RDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 220 YSDVWSFGVVLWEIATLAEQP 240
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K NILL+E+ K+ DFGL++ D + + + Y+ PE + +
Sbjct: 152 IYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKK-AYSFCGTVEYMAPEVVNRQGHSHS 210
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKD 709
+ + +GV++ E++ P F+ KD
Sbjct: 211 ADWWSYGVLMFEMLTGSLP----FQGKD 234
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA-------ISYVPPEYGR 674
V +D+ A N ++ EDF K+ DFG+ R I + TD + ++ PE +
Sbjct: 145 VHRDLAARNCMVAEDFTVKIGDFGMTRDIXE------TDXXRKGGKGLLPVRWMSPESLK 198
Query: 675 ARKANERDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 199 DGVFTTYSDVWSFGVVLWEIATLAEQP 225
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA-------ISYVPPEYGR 674
V +D+ A N ++ EDF K+ DFG+ R I + TD + ++ PE +
Sbjct: 154 VHRDLAARNCMVAEDFTVKIGDFGMTRDIXE------TDXXRKGGKGLLPVRWMSPESLK 207
Query: 675 ARKANERDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 208 DGVFTTYSDVWSFGVVLWEIATLAEQP 234
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 246 FTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFT---GSIQSELGNCKNFKS 302
F NL++L L + NN +S P + L KL YL NQ + L + ++
Sbjct: 72 FKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHEN 131
Query: 303 VLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRL 362
+ +++ F+ G+NQ+ + LG N ++S + N F G L YIR+
Sbjct: 132 EITKVRKSVFN-GLNQM---IVVELGT-NPLKSSGIENGAFQGM--------KKLSYIRI 178
Query: 363 SNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRI 422
++ ++ +IP+ L SL E++LDGN ++ L+ L KL LS N ++
Sbjct: 179 ADTNIT-TIPQGL--PPSLTELHLDGNKITKVDA---ASLKGLNNLAKLGLSFNSISAVD 232
Query: 423 PKEIGNLRSIQILKLNSN 440
+ N ++ L LN+N
Sbjct: 233 NGSLANTPHLRELHLNNN 250
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 246 FTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFT---GSIQSELGNCKNFKS 302
F NL++L L + NN +S P + L KL YL NQ + L + ++
Sbjct: 72 FKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHEN 131
Query: 303 VLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRL 362
+ +++ F+ G+NQ+ + LG N ++S + N F G L YIR+
Sbjct: 132 EITKVRKSVFN-GLNQM---IVVELGT-NPLKSSGIENGAFQGM--------KKLSYIRI 178
Query: 363 SNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRI 422
++ ++ +IP+ L SL E++LDGN ++ L+ L KL LS N ++
Sbjct: 179 ADTNIT-TIPQGL--PPSLTELHLDGNKITKVDA---ASLKGLNNLAKLGLSFNSISAVD 232
Query: 423 PKEIGNLRSIQILKLNSN 440
+ N ++ L LN+N
Sbjct: 233 NGSLANTPHLRELHLNNN 250
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+ LNED + K+ DFGLA + + + +Y+ PE + +
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVLSKKGHSF 220
Query: 681 RDNIYRFGVVLLELVIRKQP 700
+++ G ++ L++ K P
Sbjct: 221 EVDVWSIGCIMYTLLVGKPP 240
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 17/85 (20%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKA-- 678
V +D+K N+ +NED + K+LDFGLAR A YV + RA +
Sbjct: 165 VVHRDLKPGNLAVNEDCELKILDFGLARHAD----------AEMTGYVVTRWYRAPEVIL 214
Query: 679 -----NERDNIYRFGVVLLELVIRK 698
N+ +I+ G ++ E++ K
Sbjct: 215 SWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA-ISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLARL+ ++ D I ++ E R+
Sbjct: 141 VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTH 200
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 201 QSDVWSYGVTVWELM 215
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+ LNED + K+ DFGLA + + + +Y+ PE + +
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVLSKKGHSF 194
Query: 681 RDNIYRFGVVLLELVIRKQP 700
+++ G ++ L++ K P
Sbjct: 195 EVDVWSIGCIMYTLLVGKPP 214
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+ LNED + K+ DFGLA + + + +Y+ PE + +
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVLSKKGHSF 218
Query: 681 RDNIYRFGVVLLELVIRKQP 700
+++ G ++ L++ K P
Sbjct: 219 EVDVWSIGCIMYTLLVGKPP 238
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+L FGLAR D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILGFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEY--GRA 675
+ + V +D+K N+LL+ +AK+ DFGL+ ++SD + +Y PE GR
Sbjct: 134 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD--GEFLRXSCGSPNYAAPEVISGRL 191
Query: 676 RKANERDNIYRFGVVLLELVIRKQPTGPKFEDKDI 710
E D I+ GV+L L+ P F+D +
Sbjct: 192 YAGPEVD-IWSSGVILYALLCGTLP----FDDDHV 221
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +++ A N+LL AK+ DFGL++ + S+ + A + + PE RK +
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVV 712
R +++ +GV + E + Q K + +++
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA 550
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 17/84 (20%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKA--- 678
V +D+K N+ +NED + K+LDFGLAR A YV + RA +
Sbjct: 148 VHRDLKPGNLAVNEDCELKILDFGLARHAD----------AEMTGYVVTRWYRAPEVILS 197
Query: 679 ----NERDNIYRFGVVLLELVIRK 698
N+ +I+ G ++ E++ K
Sbjct: 198 WMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH---ISTDVASAISYVPPEYGRARK 677
+ +D+K SN+LLN D K+ DFGLAR+ H + VA+ P ++
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 208
Query: 678 ANERDNIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 209 YTKSIDIWSVGCILAEML 226
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH---ISTDVASAISYVPPEYGRARK 677
+ +D+K SN+LLN D K+ DFGLAR+ H + VA+ P ++
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 209
Query: 678 ANERDNIYRFGVVLLELV 695
+ +I+ G +L E++
Sbjct: 210 YTKSIDIWSVGCILAEML 227
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LDF LAR D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFYLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 621 AVKKDIKASNILL---NEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARK 677
V +D+K N+L N++ + K++DFG ARL + T + + Y PE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFT-LHYAAPELLNQNG 185
Query: 678 ANERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAK 722
+E +++ GV+L ++ + P F+ D + C S I K
Sbjct: 186 YDESCDLWSLGVILYTMLSGQVP----FQSHDRSLTCTSAVEIMK 226
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D++A+NIL++ K+ DFGLAR+ I + PE +
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFGSFTIK 349
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIV 711
+++ FG++L+E+V + P + +++
Sbjct: 350 SDVWSFGILLMEIVTYGRIPYPGMSNPEVI 379
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEY--GRARKAN 679
V +D+K N+LL+++ + K+ DFGL+ +++D + + T S +Y PE G+
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTD-GNFLKTSCGSP-NYAAPEVINGKLYAGP 187
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKF 705
E D ++ G+VL +++ + P +F
Sbjct: 188 EVD-VWSCGIVLYVMLVGRLPFDDEF 212
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + T Y PE E
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ E++
Sbjct: 206 VDIWSVGCIMGEMI 219
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LD GLAR D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDAGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAI-----SYVPPEYGRAR 676
+ +D+K N++L+ + K+ DFG+ CK +I V + Y+ PE +
Sbjct: 143 IYRDLKLDNVMLDSEGHIKIADFGM------CKENIWDGVTTKXFCGTPDYIAPEIIAYQ 196
Query: 677 KANERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKP 723
+ + + FGV+L E++ + P + ED+D + + ++ +A P
Sbjct: 197 PYGKSVDWWAFGVLLYEMLAGQAPF--EGEDEDELFQSIMEHNVAYP 241
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 614 MPDGKTVAV-KKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTD-VASAISYVPPE 671
+ DG A+ +DIK+ N+LL + A + DFGLA KS T Y+ PE
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 672 YGRA-----RKANERDNIYRFGVVLLELVIR 697
R A R ++Y G+VL EL R
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWELASR 234
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + T Y PE E
Sbjct: 149 IHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKEN 206
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ E++
Sbjct: 207 VDIWSVGCIMGEMI 220
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ ++IK+ NILL D K+ DFG I+ +S ST V + ++ PE + +
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPY-WMAPEVVTRKAYGPK 197
Query: 682 DNIYRFGVVLLELVIRKQP 700
+I+ G++ +E++ + P
Sbjct: 198 VDIWSLGIMAIEMIEGEPP 216
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + T Y PE E
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ E++
Sbjct: 206 VDIWSVGCIMGEMI 219
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK+ NILL D K+ DFG I+ +S S V + ++ PE + +
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPY-WMAPEVVTRKAYGPK 196
Query: 682 DNIYRFGVVLLELVIRKQP 700
+I+ G++ +E++ + P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK+ NILL D K+ DFG I+ +S S V + ++ PE + +
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPY-WMAPEVVTRKAYGPK 197
Query: 682 DNIYRFGVVLLELVIRKQP 700
+I+ G++ +E++ + P
Sbjct: 198 VDIWSLGIMAIEMIEGEPP 216
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR + S + T Y PE E
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ E++
Sbjct: 206 VDIWSVGCIMGEMI 219
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+N D K+ DFGLAR + +V + P ++K +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKD 709
+I+ G + E++ K P P D D
Sbjct: 201 VDIWSIGCIFAEMITGK-PLFPGVTDDD 227
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA-SAISYVPPEYGRARKANE 680
V +D+ A N + EDF K+ DFG+ R I + + + ++ PE +
Sbjct: 147 VHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 206
Query: 681 RDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 207 YSDVWSFGVVLWEIATLAEQP 227
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+KA NILL+E K+ DFG A +++ + T ++ PE A +
Sbjct: 176 IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPY-----WMAPEVILAMDEGQY 230
Query: 682 D---NIYRFGVVLLELVIRKQP 700
D +++ G+ +EL RK P
Sbjct: 231 DGKVDVWSLGITCIELAERKPP 252
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR + S + T Y PE E
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ E++
Sbjct: 206 VDIWSVGCIMGEMI 219
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+N D K+ DFGLAR + +V + P ++K +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKD 709
+I+ G + E++ K P P D D
Sbjct: 201 VDIWSIGCIFAEMITGK-PLFPGVTDDD 227
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR + S + T Y PE E
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ E++
Sbjct: 206 VDIWSVGCIMGEMI 219
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK+ NILL D K+ DFG I+ +S S V + ++ PE + +
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPY-WMAPEVVTRKAYGPK 196
Query: 682 DNIYRFGVVLLELVIRKQP 700
+I+ G++ +E++ + P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LD GLAR D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDRGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 16/173 (9%)
Query: 254 YLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFS 313
+LD SNNLL+ + HL +L L +NQ S++ L +L I S
Sbjct: 328 HLDFSNNLLTDTVFENCGHLTELETLILQMNQLKE--LSKIAEMTTQMKSLQQLDISQNS 385
Query: 314 AGMNQLSGPLPSWLGKWNQ--MESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSI 371
++ G SW M S L + F P +K + L +NK+ SI
Sbjct: 386 VSYDEKKGDC-SWTKSLLSLNMSSNILTDTIFRCLPP-------RIKVLDLHSNKIK-SI 436
Query: 372 PRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPK 424
P+++ E+L E+N+ N L + +F R L+ L+K+ L +N P+
Sbjct: 437 PKQVVKLEALQELNVASNQLKSVPDGIFDR---LTSLQKIWLHTNPWDCSCPR 486
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 128/331 (38%), Gaps = 84/331 (25%)
Query: 293 ELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVG 352
E C F S+LA+LQ + P S L N +E+ W N FI RI L++
Sbjct: 202 EDNKCSYFLSILAKLQ-----------TNPKLSNLTL-NNIETTW---NSFI-RI-LQLV 244
Query: 353 NCSMLKYIRLSNNKLSG-----------------SIPRELND---------SESLVEINL 386
+ + Y +SN KL G SI + ++D E +N+
Sbjct: 245 WHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNI 304
Query: 387 DGNMLSGTIEDVFGRC-TNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGS 445
+SGT V C + +S LD S+N+LT + + G+L ++ L L N
Sbjct: 305 KNFTVSGT-RMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMN----- 358
Query: 446 IPMRLGDSTXXXXXXXXXXXXXXXXPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEV 505
E + LQ LD+S N++S ++
Sbjct: 359 -----------------QLKELSKIAEMTTQMKSLQQLDISQNSVS-----------YDE 390
Query: 506 NIPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVVLTGY------IPRSLGHLSCSVKLN 559
D S++ + ++S N+L+ I + L + VL + IP+ + L +LN
Sbjct: 391 KKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIKSIPKQVVKLEALQELN 450
Query: 560 LSGNKLSVLVPTSFGNLNGLTNLDLSYNEFD 590
++ N+L + F L L + L N +D
Sbjct: 451 VASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 481
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR + S + T Y PE E
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ E++
Sbjct: 206 VDIWSVGCIMGEMI 219
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAI-----SYVPPEYGRAR 676
+ +D+K N++L+ + K+ DFG+ CK +I V + Y+ PE +
Sbjct: 464 IYRDLKLDNVMLDSEGHIKIADFGM------CKENIWDGVTTKXFCGTPDYIAPEIIAYQ 517
Query: 677 KANERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKP 723
+ + + FGV+L E++ + P + ED+D + + ++ +A P
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPF--EGEDEDELFQSIMEHNVAYP 562
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLA------RLISDCKSHISTDVASAISYVPPEYGRA 675
+D K+ N+LL D A + DFGLA + D + T A +
Sbjct: 145 AHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQ 204
Query: 676 RKANERDNIYRFGVVLLELVIR-KQPTGP 703
R A R ++Y G+VL ELV R K GP
Sbjct: 205 RDAFLRIDMYAMGLVLWELVSRCKAADGP 233
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SN+ +NED + K+LD GLAR D ++ VA+ P N+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDGGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ EL+
Sbjct: 204 VDIWSVGCIMAELL 217
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + T Y PE E
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPEVVTRYYRAPEVILGMGYKEN 205
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ E++
Sbjct: 206 VDIWSVGCIMGEMI 219
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLAR-LISDCKSHISTDVASAISYVPPEYGRARKAN 679
+ +D+ A N+LL AK+ DFGLAR +++D + + + ++ PE
Sbjct: 179 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT 238
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ +G++L E+
Sbjct: 239 VQSDVWSYGILLWEI 253
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLA----RLISDCKSHISTDVASAISYVPPEYGRARK 677
+ +D+KA NIL D D K+ DFG++ R I I T A V E + R
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRP 216
Query: 678 ANERDNIYRFGVVLLELVIRKQP 700
+ + +++ G+ L+E+ + P
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPP 239
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 41/137 (29%)
Query: 304 LAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLS 363
L+ LQIF SA + K++ + ++LN N + +P E+ N S L+ + LS
Sbjct: 231 LSNLQIFNISAN-----------IFKYDFLTRLYLNGNS-LTELPAEIKNLSNLRVLDLS 278
Query: 364 NNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIP 423
+N+L+ S+P EL G C L D NM+T +P
Sbjct: 279 HNRLT-SLPAEL------------------------GSCFQLKYFYFFD---NMVT-TLP 309
Query: 424 KEIGNLRSIQILKLNSN 440
E GNL ++Q L + N
Sbjct: 310 WEFGNLCNLQFLGVEGN 326
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 16/99 (16%)
Query: 127 DLSKLRVLNLSQNLL--------------FGQPSPQVSNLKRLKMLSLGENQLSGSLPSQ 172
DLS L++ N+S N+ + ++ NL L++L L N+L+ SLP++
Sbjct: 230 DLSNLQIFNISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAE 288
Query: 173 LGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGN 211
LG L+ N T +P E G++ L+ L GN
Sbjct: 289 LGSCFQLKYFYFFDNMVTT-LPWEFGNLCNLQFLGVEGN 326
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 381 LVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSN 440
L + L+GN L+ ++ NLS L LDLS N LT +P E+G+ ++ N
Sbjct: 249 LTRLYLNGNSLT----ELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDN 303
Query: 441 FFNGSIPMRLGD 452
++P G+
Sbjct: 304 MVT-TLPWEFGN 314
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
+ +D+ A N +L ED V DFGL+R I + AS + ++ E
Sbjct: 159 IHRDLAARNCMLAEDMTVCVADFGLSRKIYS-GDYYRQGCASKLPVKWLALESLADNLYT 217
Query: 680 ERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKP 723
+++ FGV + E++ R Q E+ +I + N + +P
Sbjct: 218 VHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQP 261
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A N+LL AK+ DFGL++ + +++ + + PE K +
Sbjct: 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 550
Query: 680 ERDNIYRFGVVLLE 693
+ +++ FGV++ E
Sbjct: 551 SKSDVWSFGVLMWE 564
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLAR-LISDCKSHISTDVASAISYVPPEYGRARKAN 679
+ +D+ A N+LL AK+ DFGLAR +++D + + + ++ PE
Sbjct: 187 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT 246
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ +G++L E+
Sbjct: 247 VQSDVWSYGILLWEI 261
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A N+LL AK+ DFGL++ + +++ + + PE K +
Sbjct: 492 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 551
Query: 680 ERDNIYRFGVVLLE 693
+ +++ FGV++ E
Sbjct: 552 SKSDVWSFGVLMWE 565
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + Y PE E
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMEPEVVTRYYRAPEVILGMGYKEN 205
Query: 682 DNIYRFGVVLLELVIRK 698
+I+ G ++ E+V K
Sbjct: 206 VDIWSVGCIMGEMVCHK 222
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+KA NILL+E K+ DFG A +++ + T ++ PE A +
Sbjct: 137 IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPY-----WMAPEVILAMDEGQY 191
Query: 682 D---NIYRFGVVLLELVIRKQP 700
D +++ G+ +EL RK P
Sbjct: 192 DGKVDVWSLGITCIELAERKPP 213
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+ +NED + K+LDFGLAR S + V + P + +
Sbjct: 150 IHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXVVTRWYRAPEVILNWMRYTQT 206
Query: 682 DNIYRFGVVLLELVIRK 698
+I+ G ++ E++ K
Sbjct: 207 VDIWSVGCIMAEMITGK 223
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEY---GRARKA 678
+ +DIK SNILL+ + K+ DFG++ + D S T A Y+ PE +R+
Sbjct: 148 IHRDIKPSNILLDRSGNIKLCDFGISGQLVD--SIAKTRDAGCRPYMAPERIDPSASRQG 205
Query: 679 NE-RDNIYRFGVVLLELVIRKQPTGPKF 705
+ R +++ G+ L EL + P PK+
Sbjct: 206 YDVRSDVWSLGITLYELATGRFPY-PKW 232
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLAR-LISDCKSHISTDVASAISYVPPEYGRARKAN 679
+ +D+ A N+LL AK+ DFGLAR +++D + + + ++ PE
Sbjct: 173 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT 232
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ +G++L E+
Sbjct: 233 VQSDVWSYGILLWEI 247
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+N+ K+ DFGLAR + S++V + P +R +
Sbjct: 130 LHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTS 189
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKD 709
+I+ G +L E++ K P P D++
Sbjct: 190 IDIWSCGCILAEMITGK-PLFPGTNDEE 216
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA-SAISYVPPEYGRARKANE 680
V +D+ A N ++ DF K+ DFG+ R I + + + ++ PE +
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTT 211
Query: 681 RDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 212 SSDMWSFGVVLWEITSLAEQP 232
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLAR-LISDCKSHISTDVASAISYVPPEYGRARKAN 679
+ +D+ A N+LL AK+ DFGLAR +++D + + + ++ PE
Sbjct: 185 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT 244
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ +G++L E+
Sbjct: 245 VQSDVWSYGILLWEI 259
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A N+LL AK+ DFGL++ + +++ + + PE K +
Sbjct: 127 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 186
Query: 680 ERDNIYRFGVVLLE 693
+ +++ FGV++ E
Sbjct: 187 SKSDVWSFGVLMWE 200
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A N+LL AK+ DFGL++ + +++ + + PE K +
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 680 ERDNIYRFGVVLLE 693
+ +++ FGV++ E
Sbjct: 193 SKSDVWSFGVLMWE 206
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA-SAISYVPPEYGRARKANE 680
V +D+ A N ++ DF K+ DFG+ R I + + + ++ PE +
Sbjct: 151 VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTT 210
Query: 681 RDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 211 SSDMWSFGVVLWEITSLAEQP 231
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 30/190 (15%)
Query: 403 TNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTXXXXXXXX 462
+L LE LDLS N L+ + + +I + L+ +F NG I M
Sbjct: 368 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSF-NGVITMS------------- 413
Query: 463 XXXXXXXXPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIP--DLSYSHNYRKFD 520
L QL+ LD ++NL + +S+ S + N+ D+S++H F+
Sbjct: 414 ---------SNFLGLEQLEHLDFQHSNLKQ--MSEFSVFLSLRNLIYLDISHTHTRVAFN 462
Query: 521 LSYNMLSG-PIPKELGSCVVVLTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGL 579
+N LS + K G+ ++P L L+LS +L L PT+F +L+ L
Sbjct: 463 GIFNGLSSLEVLKMAGNSFQ--ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 520
Query: 580 TNLDLSYNEF 589
L++S+N F
Sbjct: 521 QVLNMSHNNF 530
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLAR-LISDCKSH--ISTDVASAISYVPPEYGRA-RK 677
+ +D+K SN+L+NE+ + K+ DFG+AR L + H T+ + Y PE + +
Sbjct: 181 IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE 240
Query: 678 ANERDNIYRFGVVLLELVIRKQ 699
+ +++ G + E++ R+Q
Sbjct: 241 YTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLAR-LISDCKSHISTDVASAISYVPPEYGRARKAN 679
+ +D+ A N+LL AK+ DFGLAR +++D + + + ++ PE
Sbjct: 185 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT 244
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ +G++L E+
Sbjct: 245 VQSDVWSYGILLWEI 259
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA-SAISYVPPEYGRARKANE 680
V +D+ A N ++ DF K+ DFG+ R I + + + ++ PE +
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTT 211
Query: 681 RDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 212 SSDMWSFGVVLWEITSLAEQP 232
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A N+LL AK+ DFGL++ + +++ + + PE K +
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 188
Query: 680 ERDNIYRFGVVLLE 693
+ +++ FGV++ E
Sbjct: 189 SKSDVWSFGVLMWE 202
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKS 655
+ +D+K +N LLN+D KV DFGLAR I+ K
Sbjct: 151 IHRDLKPANCLLNQDCSVKVCDFGLARTINSEKD 184
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A N+LL AK+ DFGL++ + +++ + + PE K +
Sbjct: 147 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 206
Query: 680 ERDNIYRFGVVLLE 693
+ +++ FGV++ E
Sbjct: 207 SKSDVWSFGVLMWE 220
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A N+LL AK+ DFGL++ + +++ + + PE K +
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 198
Query: 680 ERDNIYRFGVVLLE 693
+ +++ FGV++ E
Sbjct: 199 SKSDVWSFGVLMWE 212
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLAR-LISDCKSHISTDVASAISYVPPEYGRARKAN 679
+ +D+ A N+LL AK+ DFGLAR +++D + + + ++ PE
Sbjct: 181 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT 240
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ +G++L E+
Sbjct: 241 VQSDVWSYGILLWEI 255
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A N+LL AK+ DFGL++ + +++ + + PE K +
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 680 ERDNIYRFGVVLLE 693
+ +++ FGV++ E
Sbjct: 209 SKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA--ISYVPPEYGRARKAN 679
V +D+ A N+LL AK+ DFGL++ + +++ + + PE K +
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 680 ERDNIYRFGVVLLE 693
+ +++ FGV++ E
Sbjct: 209 SKSDVWSFGVLMWE 222
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGR 674
G + +D+ NIL+ + K+ DFGL +++ K + S I + PE
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 675 ARKANERDNIYRFGVVLLEL 694
K + +++ FGVVL EL
Sbjct: 209 ESKFSVASDVWSFGVVLYEL 228
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 34/192 (17%)
Query: 403 TNLSQLEKLDLSSNMLT--GRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTXXXXXX 460
+L LE LDLS N L+ G + S++ L L+ FNG I M
Sbjct: 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLS---FNGVITMS----------- 389
Query: 461 XXXXXXXXXXPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIP--DLSYSHNYRK 518
L QL+ LD ++NL + +S+ S + N+ D+S++H
Sbjct: 390 -----------SNFLGLEQLEHLDFQHSNLKQ--MSEFSVFLSLRNLIYLDISHTHTRVA 436
Query: 519 FDLSYNMLSG-PIPKELGSCVVVLTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLN 577
F+ +N LS + K G+ ++P L L+LS +L L PT+F +L+
Sbjct: 437 FNGIFNGLSSLEVLKMAGNSFQ--ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS 494
Query: 578 GLTNLDLSYNEF 589
L L++S+N F
Sbjct: 495 SLQVLNMSHNNF 506
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGR 674
G + +D+ NIL+ + K+ DFGL +++ K + S I + PE
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 675 ARKANERDNIYRFGVVLLEL 694
K + +++ FGVVL EL
Sbjct: 209 ESKFSVASDVWSFGVVLYEL 228
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 121 VSPLLFD-LSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQL-GVLTW 178
+ P +FD L L+ L L N L P +L +L +L LG NQL+ LPS + L
Sbjct: 55 LEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVH 113
Query: 179 LETLSLCSNSFTGEMPSELGDMKQLKSLDFSGN 211
L+ L +C N T E+P + + L L N
Sbjct: 114 LKELFMCCNKLT-ELPRGIERLTHLTHLALDQN 145
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 336 VWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDS-ESLVEINLDGNMLSGT 394
++L++NQ P + LK + L +N+L G++P + DS L ++L N L+
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVL 103
Query: 395 IEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIP 447
VF R +L +L + N LT +P+ I L + L L+ N SIP
Sbjct: 104 PSAVFDRLVHLKELF---MCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIP 151
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 14/87 (16%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA-------ISYVPPEYGR 674
V +D+ A N ++ DF K+ DFG+ R I + TD + ++ PE +
Sbjct: 149 VHRDLAARNCMVAHDFTVKIGDFGMTRDIXE------TDXXRKGGKGLLPVRWMAPESLK 202
Query: 675 ARKANERDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 203 DGVFTTSSDMWSFGVVLWEITSLAEQP 229
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 14/87 (16%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA-------ISYVPPEYGR 674
V +D+ A N ++ DF K+ DFG+ R I + TD + ++ PE +
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIXE------TDXXRKGGKGLLPVRWMAPESLK 205
Query: 675 ARKANERDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 206 DGVFTTSSDMWSFGVVLWEITSLAEQP 232
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 14/87 (16%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASA-------ISYVPPEYGR 674
V +D+ A N ++ DF K+ DFG+ R I + TD + ++ PE +
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIXE------TDXXRKGGKGLLPVRWMAPESLK 205
Query: 675 ARKANERDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 206 DGVFTTSSDMWSFGVVLWEITSLAEQP 232
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGR 674
G + +D+ NIL+ + K+ DFGL +++ K + S I + PE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 675 ARKANERDNIYRFGVVLLEL 694
K + +++ FGVVL EL
Sbjct: 191 ESKFSVASDVWSFGVVLYEL 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGR 674
G + +D+ NIL+ + K+ DFGL +++ K + S I + PE
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 675 ARKANERDNIYRFGVVLLEL 694
K + +++ FGVVL EL
Sbjct: 222 ESKFSVASDVWSFGVVLYEL 241
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGR 674
G + +D+ NIL+ + K+ DFGL +++ K + S I + PE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 675 ARKANERDNIYRFGVVLLEL 694
K + +++ FGVVL EL
Sbjct: 191 ESKFSVASDVWSFGVVLYEL 210
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLAR-LISDCKSH--ISTDVASAISYVPPEYGRA-RK 677
+ +D+K SN+L+NE+ + K+ DFG+AR L + H T+ + Y PE + +
Sbjct: 180 IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE 239
Query: 678 ANERDNIYRFGVVLLELVIRKQ 699
+ +++ G + E++ R+Q
Sbjct: 240 YTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 13/110 (11%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-----AISYVPPEYGRAR 676
+ +D+K N++L+ + K+ DFG+ CK H+ V + Y+ PE +
Sbjct: 142 IYRDLKLDNVMLDSEGHIKIADFGM------CKEHMMDGVTTREFCGTPDYIAPEIIAYQ 195
Query: 677 KANERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKPGML 726
+ + + +GV+L E++ + P ED+D + + ++ ++ P L
Sbjct: 196 PYGKSVDWWAYGVLLYEMLAGQPPFDG--EDEDELFQSIMEHNVSYPKSL 243
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGR 674
G + +D+ NIL+ + K+ DFGL +++ K + S I + PE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 675 ARKANERDNIYRFGVVLLEL 694
K + +++ FGVVL EL
Sbjct: 191 ESKFSVASDVWSFGVVLYEL 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGR 674
G + +D+ NIL+ + K+ DFGL +++ K + S I + PE
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 675 ARKANERDNIYRFGVVLLEL 694
K + +++ FGVVL EL
Sbjct: 198 ESKFSVASDVWSFGVVLYEL 217
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + Y PE E
Sbjct: 150 IHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMVPFVVTRYYRAPEVILGMGYKEN 207
Query: 682 DNIYRFGVVLLELV 695
+I+ G ++ E++
Sbjct: 208 VDIWSVGCIMGEMI 221
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +++ A N+LL +V DFG+A L+ D K + ++ + I ++ E K
Sbjct: 137 VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTH 196
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 197 QSDVWSYGVTVWELM 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGR 674
G + +D+ NIL+ + K+ DFGL +++ K + S I + PE
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 675 ARKANERDNIYRFGVVLLEL 694
K + +++ FGVVL EL
Sbjct: 195 ESKFSVASDVWSFGVVLYEL 214
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGR 674
G + +D+ NIL+ + K+ DFGL +++ K + S I + PE
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 675 ARKANERDNIYRFGVVLLEL 694
K + +++ FGVVL EL
Sbjct: 189 ESKFSVASDVWSFGVVLYEL 208
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGR 674
G + +D+ NIL+ + K+ DFGL +++ K + S I + PE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 675 ARKANERDNIYRFGVVLLEL 694
K + +++ FGVVL EL
Sbjct: 194 ESKFSVASDVWSFGVVLYEL 213
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 189 VDVWSCGIVLTAMLAGELP 207
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A NILL K+ DFGLAR I + +++ A + ++ PE
Sbjct: 189 CIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYT 248
Query: 680 ERDNIYRFGVVLLEL 694
+++ +G+ L EL
Sbjct: 249 FESDVWSYGIFLWEL 263
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGR 674
G + +D+ NIL+ + K+ DFGL +++ K + S I + PE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 675 ARKANERDNIYRFGVVLLEL 694
K + +++ FGVVL EL
Sbjct: 194 ESKFSVASDVWSFGVVLYEL 213
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGR 674
G + +D+ NIL+ + K+ DFGL +++ K + S I + PE
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 675 ARKANERDNIYRFGVVLLEL 694
K + +++ FGVVL EL
Sbjct: 190 ESKFSVASDVWSFGVVLYEL 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGR 674
G + +D+ NIL+ + K+ DFGL +++ K + S I + PE
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 675 ARKANERDNIYRFGVVLLEL 694
K + +++ FGVVL EL
Sbjct: 196 ESKFSVASDVWSFGVVLYEL 215
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +++ A N+LL +V DFG+A L+ D K + ++ + I ++ E K
Sbjct: 155 VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTH 214
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 215 QSDVWSYGVTVWELM 229
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARK--AN 679
+ +DIK SN+L+ ED K+ DFG++ + +S V + P RK +
Sbjct: 159 IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSG 218
Query: 680 ERDNIYRFGVVLLELVIRKQP 700
+ +++ GV L V + P
Sbjct: 219 KALDVWAMGVTLYCFVFGQCP 239
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 189 VDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 189 VDVWSCGIVLTAMLAGELP 207
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGR 674
G + +D+ NIL+ + K+ DFGL +++ K + S I + PE
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 675 ARKANERDNIYRFGVVLLEL 694
K + +++ FGVVL EL
Sbjct: 197 ESKFSVASDVWSFGVVLYEL 216
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 189 VDVWSCGIVLTAMLAGELP 207
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKANE 680
V +D+ A NIL+ E K+ DFGL+R + + S++ + ++ E
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTT 231
Query: 681 RDNIYRFGVVLLELV 695
+ +++ FGV+L E+V
Sbjct: 232 QSDVWSFGVLLWEIV 246
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K SNI++ D K+LDFGLAR S + Y PE E
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMEPEVVTRYYRAPEVILGMGYKEN 205
Query: 682 DNIYRFGVVLLELVIRK 698
+++ G ++ E+V K
Sbjct: 206 VDLWSVGCIMGEMVCHK 222
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + + K+ DFGLAR + +V + P ++K +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 681 RDNIYRFGVVLLELV 695
+I+ G + E+V
Sbjct: 181 TIDIWSVGCIFAEMV 195
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGR 674
G + +D+ NIL+ + K+ DFGL +++ K + S I + PE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 675 ARKANERDNIYRFGVVLLEL--VIRKQPTGP 703
K + +++ FGVVL EL I K + P
Sbjct: 194 ESKFSVASDVWSFGVVLYELFTYIEKSKSPP 224
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI--SDCKSHISTDVASAISYVPPEYGRARKAN 679
V +D+ A N+LL AK+ DFGL++ + + T + + PE K +
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 680 ERDNIYRFGVVLLE 693
+ +++ FGV++ E
Sbjct: 193 SKSDVWSFGVLMWE 206
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + + K+ DFGLAR + +V + P ++K +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 681 RDNIYRFGVVLLELV 695
+I+ G + E+V
Sbjct: 181 TIDIWSVGCIFAEMV 195
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLAR-LISDCKSHISTDVASAISYVPPEYGRARKAN 679
V +D+ A N+L+ K+ DFGLAR ++SD + + + ++ PE
Sbjct: 193 CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYT 252
Query: 680 ERDNIYRFGVVLLEL 694
+ +++ +G++L E+
Sbjct: 253 IKSDVWSYGILLWEI 267
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK NILL+ + + DFGL++ ++ + D I Y+ P+ R +
Sbjct: 181 IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHD 240
Query: 682 DNI--YRFGVVLLELVIRKQP 700
+ + GV++ EL+ P
Sbjct: 241 KAVDWWSLGVLMYELLTGASP 261
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 189 VDVWSCGIVLTAMLAGELP 207
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 189 VDVWSCGIVLTAMLAGELP 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 189 VDVWSCGIVLTAMLAGELP 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLA-----RLISDCKSHISTDVASAISYVPPEYGRAR 676
+ +D+KA NIL D D K+ DFG++ I S I T A V E + R
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDR 189
Query: 677 KANERDNIYRFGVVLLELVIRKQP 700
+ + +++ G+ L+E+ + P
Sbjct: 190 PYDYKADVWSLGITLIEMAEIEPP 213
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 127 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 186
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 187 VDVWSCGIVLTAMLAGELP 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 201
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 202 QSDVWSYGVTVWELM 216
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 201
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 202 QSDVWSYGVTVWELM 216
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 143 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 202
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 203 QSDVWSYGVTVWELM 217
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 173 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 232
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 233 QSDVWSYGVTVWELM 247
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 140 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 199
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 200 QSDVWSYGVTVWELM 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 201
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 202 QSDVWSYGVTVWELM 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 205
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 206 QSDVWSYGVTVWELM 220
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 200
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 201 QSDVWSYGVTVWELM 215
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 164 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 223
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 224 QSDVWSYGVTVWELM 238
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 201
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 202 QSDVWSYGVTVWELM 216
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 198
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 199 QSDVWSYGVTVWELM 213
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 145 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 204
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 205 QSDVWSYGVTVWELM 219
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 205
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 206 QSDVWSYGVTVWELM 220
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 198
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 199 QSDVWSYGVTVWELM 213
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 200
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 201 QSDVWSYGVTVWELM 215
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 205
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 206 QSDVWSYGVTVWELM 220
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 140 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 199
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 200 QSDVWSYGVTVWELM 214
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 198
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 199 QSDVWSYGVTVWELM 213
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 198
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 199 QSDVWSYGVTVWELM 213
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 149 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 208
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 209 QSDVWSYGVTVWELM 223
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 198
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 199 QSDVWSYGVTVWELM 213
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + + K+ DFGLAR + ++ + P ++K +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180
Query: 681 RDNIYRFGVVLLELV 695
+I+ G + E+V
Sbjct: 181 TIDIWSVGCIFAEMV 195
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 136 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 195
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 196 QSDVWSYGVTVWELM 210
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAI--SYVPPEYGRARKAN 679
+ +D+ A N+LL K+ DFGL R + H + ++ PE + R +
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFS 202
Query: 680 ERDNIYRFGVVLLELVIRKQ 699
+ + FGV L E+ Q
Sbjct: 203 HASDTWMFGVTLWEMFTYGQ 222
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDV-ASAISYVPPEYG--- 673
K + +D+K SN+L+N K+ DFG++ + D ++ D+ A Y+ PE
Sbjct: 128 KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD---DVAKDIDAGCKPYMAPERINPE 184
Query: 674 -RARKANERDNIYRFGVVLLELVIRKQP 700
+ + + +I+ G+ ++EL I + P
Sbjct: 185 LNQKGYSVKSDIWSLGITMIELAILRFP 212
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A NILL K+ DFGLAR I + +++ A + ++ PE
Sbjct: 182 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYT 241
Query: 680 ERDNIYRFGVVLLEL 694
+++ +G+ L EL
Sbjct: 242 FESDVWSYGIFLWEL 256
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 13/111 (11%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAI-----SYVPPEYGRAR 676
+ +D+K N+LL+ + K+ DFG+ CK I V +A Y+ PE +
Sbjct: 146 IYRDLKLDNVLLDHEGHCKLADFGM------CKEGICNGVTTATFCGTPDYIAPEILQEM 199
Query: 677 KANERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNPIAKPGMLR 727
+ + GV+L E++ P + E++D + + ++ + P L
Sbjct: 200 LYGPAVDWWAMGVLLYEMLCGHAPF--EAENEDDLFEAILNDEVVYPTWLH 248
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A NILL K+ DFGLAR I + +++ A + ++ PE
Sbjct: 189 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYT 248
Query: 680 ERDNIYRFGVVLLEL 694
+++ +G+ L EL
Sbjct: 249 FESDVWSYGIFLWEL 263
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH--ISTDVASAISYVPPEYGR 674
G + +++ NIL+ + K+ DFGL +++ K + + S I + PE
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 675 ARKANERDNIYRFGVVLLEL 694
K + +++ FGVVL EL
Sbjct: 192 ESKFSVASDVWSFGVVLYEL 211
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAI--SYVPPEYGRARKAN 679
+ +D+ A N+LL K+ DFGL R + H + ++ PE + R +
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFS 202
Query: 680 ERDNIYRFGVVLLELVIRKQ 699
+ + FGV L E+ Q
Sbjct: 203 HASDTWMFGVTLWEMFTYGQ 222
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAI--SYVPPEYGRARKAN 679
+ +D+ A N+LL K+ DFGL R + H + ++ PE + R +
Sbjct: 137 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFS 196
Query: 680 ERDNIYRFGVVLLELVIRKQ 699
+ + FGV L E+ Q
Sbjct: 197 HASDTWMFGVTLWEMFTYGQ 216
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 23/91 (25%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAI-----SYVPPE---- 671
V +DIK N++L++D K+ DFGL CK IS Y+ PE
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKTFCGTPEYLAPEVLED 179
Query: 672 --YGRARKANERDNIYRFGVVLLELVIRKQP 700
YGRA + + GVV+ E++ + P
Sbjct: 180 NDYGRAV------DWWGLGVVMYEMMCGRLP 204
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAI--SYVPPEYGRARKAN 679
+ +D+ A N+LL K+ DFGL R + H + ++ PE + R +
Sbjct: 137 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFS 196
Query: 680 ERDNIYRFGVVLLELVIRKQ 699
+ + FGV L E+ Q
Sbjct: 197 HASDTWMFGVTLWEMFTYGQ 216
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A NILL K+ DFGLAR I + +++ A + ++ PE
Sbjct: 166 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYT 225
Query: 680 ERDNIYRFGVVLLEL 694
+++ +G+ L EL
Sbjct: 226 FESDVWSYGIFLWEL 240
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 188
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 189 VDVWSCGIVLTAMLAGELP 207
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D+KA N+LL+ D + K+ DFG + + + T S Y PE + +K +
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGKLDTFCGSP-PYAAPELFQGKKYDGP 190
Query: 682 D-NIYRFGVVLLELV 695
+ +++ GV+L LV
Sbjct: 191 EVDVWSLGVILYTLV 205
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA-- 675
K + +D+K SN+L+N K+ DFG++ + D S T A Y+ PE
Sbjct: 172 KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD--SVAKTIDAGCKPYMAPERINPEL 229
Query: 676 --RKANERDNIYRFGVVLLELVIRKQP 700
+ + + +I+ G+ ++EL I + P
Sbjct: 230 NQKGYSVKSDIWSLGITMIELAILRFP 256
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKAN 679
+ +D+ A NILL K+ DFGLAR I + +++ A + ++ PE
Sbjct: 184 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYT 243
Query: 680 ERDNIYRFGVVLLEL 694
+++ +G+ L EL
Sbjct: 244 FESDVWSYGIFLWEL 258
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 23/91 (25%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAI-----SYVPPE---- 671
V +DIK N++L++D K+ DFGL CK IS Y+ PE
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKTFCGTPEYLAPEVLED 179
Query: 672 --YGRARKANERDNIYRFGVVLLELVIRKQP 700
YGRA + + GVV+ E++ + P
Sbjct: 180 NDYGRAV------DWWGLGVVMYEMMCGRLP 204
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAI--SYVPPEYGRARKAN 679
+ +D+ A N+LL K+ DFGL R + H + ++ PE + R +
Sbjct: 133 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFS 192
Query: 680 ERDNIYRFGVVLLELVIRKQ 699
+ + FGV L E+ Q
Sbjct: 193 HASDTWMFGVTLWEMFTYGQ 212
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLIS-DCKSHISTDVASAISYVPPEYGRARKAN-ER 681
+DIK N+LL+E + K+ DFGLA + + + + + + YV PE + R+ + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 682 DNIYRFGVVLLELVIRKQP 700
+++ G+VL ++ + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFGLA+L+ ++ K + + I ++ E R
Sbjct: 133 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 192
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 193 QSDVWSYGVTVWELM 207
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAI--SYVPPEYGRARKAN 679
+ +D+ A N+LL K+ DFGL R + H + ++ PE + R +
Sbjct: 133 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFS 192
Query: 680 ERDNIYRFGVVLLELVIRKQ 699
+ + FGV L E+ Q
Sbjct: 193 HASDTWMFGVTLWEMFTYGQ 212
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 23/91 (25%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDV-----ASAISYVPPE---- 671
V +DIK N++L++D K+ DFGL CK IS Y+ PE
Sbjct: 131 VVYRDIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKXFCGTPEYLAPEVLED 184
Query: 672 --YGRARKANERDNIYRFGVVLLELVIRKQP 700
YGRA + + GVV+ E++ + P
Sbjct: 185 NDYGRAV------DWWGLGVVMYEMMCGRLP 209
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 35.8 bits (81), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 23/91 (25%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAI-----SYVPPE---- 671
V +DIK N++L++D K+ DFGL CK IS Y+ PE
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKTFCGTPEYLAPEVLED 182
Query: 672 --YGRARKANERDNIYRFGVVLLELVIRKQP 700
YGRA + + GVV+ E++ + P
Sbjct: 183 NDYGRAV------DWWGLGVVMYEMMCGRLP 207
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAI--SYVPPEYGRARKAN 679
+ +D+ A N+LL K+ DFGL R + H + ++ PE + R +
Sbjct: 133 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFS 192
Query: 680 ERDNIYRFGVVLLELVIRKQ 699
+ + FGV L E+ Q
Sbjct: 193 HASDTWMFGVTLWEMFTYGQ 212
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 23/91 (25%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAI-----SYVPPE---- 671
V +DIK N++L++D K+ DFGL CK IS Y+ PE
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKXFCGTPEYLAPEVLED 179
Query: 672 --YGRARKANERDNIYRFGVVLLELVIRKQP 700
YGRA + + GVV+ E++ + P
Sbjct: 180 NDYGRAV------DWWGLGVVMYEMMCGRLP 204
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI 650
+ +D+K +N L+N+D KV DFGLAR +
Sbjct: 178 LHRDLKPANCLVNQDCSVKVCDFGLARTV 206
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 23/91 (25%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDV-----ASAISYVPPE---- 671
V +DIK N++L++D K+ DFGL CK IS Y+ PE
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKXFCGTPEYLAPEVLED 179
Query: 672 --YGRARKANERDNIYRFGVVLLELVIRKQP 700
YGRA + + GVV+ E++ + P
Sbjct: 180 NDYGRAV------DWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 23/91 (25%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDV-----ASAISYVPPE---- 671
V +DIK N++L++D K+ DFGL CK IS Y+ PE
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKXFCGTPEYLAPEVLED 179
Query: 672 --YGRARKANERDNIYRFGVVLLELVIRKQP 700
YGRA + + GVV+ E++ + P
Sbjct: 180 NDYGRAV------DWWGLGVVMYEMMCGRLP 204
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA-SAISYVPPEYGRARKANE 680
V +++ A N ++ DF K+ DFG+ R I + + + ++ PE +
Sbjct: 153 VHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTT 212
Query: 681 RDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 213 SSDMWSFGVVLWEITSLAEQP 233
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D+KA N+LL+ D + K+ DFG + + + + T S Y PE + +K +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSP-PYAAPELFQGKKYDGP 192
Query: 682 D-NIYRFGVVLLELV 695
+ +++ GV+L LV
Sbjct: 193 EVDVWSLGVILYTLV 207
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D+KA N+LL+ D + K+ DFG + + + + T S Y PE + +K +
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSP-PYAAPELFQGKKYDGP 185
Query: 682 D-NIYRFGVVLLELV 695
+ +++ GV+L LV
Sbjct: 186 EVDVWSLGVILYTLV 200
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVA-SAISYVPPEYGRARKANE 680
V +++ A N ++ DF K+ DFG+ R I + + + ++ PE +
Sbjct: 152 VHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTT 211
Query: 681 RDNIYRFGVVLLELV-IRKQP 700
+++ FGVVL E+ + +QP
Sbjct: 212 SSDMWSFGVVLWEITSLAEQP 232
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 558 LNLSGNKLSVLVPTSFGNLNGLTNLDLSYNEFDGN 592
LNL N++S ++P SF +LN LT+L+L+ N F+ N
Sbjct: 107 LNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 37/87 (42%)
Query: 128 LSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSN 187
L L L L +N L G ++ L LGEN++ L L+TL+L N
Sbjct: 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDN 112
Query: 188 SFTGEMPSELGDMKQLKSLDFSGNGFN 214
+ MP + L SL+ + N FN
Sbjct: 113 QISCVMPGSFEHLNSLTSLNLASNPFN 139
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 371 IPRE--LNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGN 428
IPR+ L+ +E L+ N G + S + +FGR L L KL+L N LTG P
Sbjct: 23 IPRDIPLHTTELLLNDNELGRISS---DGLFGR---LPHLVKLELKRNQLTGIEPNAFEG 76
Query: 429 LRSIQILKLNSN 440
IQ L+L N
Sbjct: 77 ASHIQELQLGEN 88
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D+KA N+LL+ D + K+ DFG + + + + T S Y PE + +K +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSP-PYAAPELFQGKKYDGP 192
Query: 682 D-NIYRFGVVLLELV 695
+ +++ GV+L LV
Sbjct: 193 EVDVWSLGVILYTLV 207
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK N+L+ + K+ DFG + S + + Y+PPE + +E
Sbjct: 136 VIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 192
Query: 681 RDNIYRFGVVLLELVI 696
+ +++ GV+ E ++
Sbjct: 193 KVDLWCAGVLCYEFLV 208
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D+KA N+LL+ D + K+ DFG + + + + T S Y PE + +K +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSP-PYAAPELFQGKKYDGP 192
Query: 682 D-NIYRFGVVLLELV 695
+ +++ GV+L LV
Sbjct: 193 EVDVWSLGVILYTLV 207
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK N+L+ + K+ DFG + S + + Y+PPE + +E
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 681 RDNIYRFGVVLLELVI 696
+ +++ GV+ E ++
Sbjct: 192 KVDLWCAGVLCYEFLV 207
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKANE 680
V +D+ A NIL+ E K+ DFGL+R + + S + + ++ E
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTT 231
Query: 681 RDNIYRFGVVLLELV 695
+ +++ FGV+L E+V
Sbjct: 232 QSDVWSFGVLLWEIV 246
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK N+L+ + K+ DFG + S + + Y+PPE + +E
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 681 RDNIYRFGVVLLELVI 696
+ +++ GV+ E ++
Sbjct: 192 KVDLWCAGVLCYEFLV 207
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-AISYVPPEYGRARKANE 680
V +D+ A NIL+ E K+ DFGL+R + + S + + ++ E
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTT 231
Query: 681 RDNIYRFGVVLLELV 695
+ +++ FGV+L E+V
Sbjct: 232 QSDVWSFGVLLWEIV 246
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 17/82 (20%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLA-------RLISDCKSHISTDVASAISYVPPEYGR 674
V +D+KA N+LL+ D + K+ DFG + +L + C A Y PE +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFC---------GAPPYAAPELFQ 185
Query: 675 ARKANERD-NIYRFGVVLLELV 695
+K + + +++ GV+L LV
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLV 207
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D+KA N+LL+ D + K+ DFG + + + + T S Y PE + +K +
Sbjct: 136 VHRDLKAENLLLDGDMNIKIADFGFSNEFT-VGNKLDTFCGSP-PYAAPELFQGKKYDGP 193
Query: 682 D-NIYRFGVVLLELV 695
+ +++ GV+L LV
Sbjct: 194 EVDVWSLGVILYTLV 208
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+LL++D + ++ D GLA + ++ + A ++ PE + +
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFS 369
Query: 682 DNIYRFGVVLLELVIRKQP---TGPKFEDKDI 710
+ + GV L E++ + P G K E+K++
Sbjct: 370 VDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 622 VKKDIKASNILLN---EDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKA 678
V +D+K NILL +D D K++DFGL+ + + + +A Y+ PE R
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-NTKMKDRIGTAY-YIAPEVLRG-TY 199
Query: 679 NERDNIYRFGVVLLELV 695
+E+ +++ GV+L L+
Sbjct: 200 DEKCDVWSAGVILYILL 216
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+LL++D + ++ D GLA + ++ + A ++ PE + +
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFS 369
Query: 682 DNIYRFGVVLLELVIRKQP---TGPKFEDKDI 710
+ + GV L E++ + P G K E+K++
Sbjct: 370 VDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 622 VKKDIKASNILLN---EDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKA 678
V +D+K NILL +D D K++DFGL+ + + + +A Y+ PE R
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-NTKMKDRIGTAY-YIAPEVLRG-TY 199
Query: 679 NERDNIYRFGVVLLELV 695
+E+ +++ GV+L L+
Sbjct: 200 DEKCDVWSAGVILYILL 216
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK+ +ILL D K+ DFG IS V + P R+ A E
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATE 221
Query: 681 RDNIYRFGVVLLELV 695
D I+ G++++E+V
Sbjct: 222 VD-IWSLGIMVIEMV 235
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+LL++D + ++ D GLA + ++ + A ++ PE + +
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFS 369
Query: 682 DNIYRFGVVLLELVIRKQP---TGPKFEDKDI 710
+ + GV L E++ + P G K E+K++
Sbjct: 370 VDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+LL++D + ++ D GLA + ++ + A ++ PE + +
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFS 369
Query: 682 DNIYRFGVVLLELVIRKQP---TGPKFEDKDI 710
+ + GV L E++ + P G K E+K++
Sbjct: 370 VDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRAR 676
GK V + +DIK N+LL + K+ DFG + S + + Y+PPE R
Sbjct: 141 GKKV-IHRDIKPENLLLGLKGELKIADFGWS---VHAPSLRRKTMCGTLDYLPPEMIEGR 196
Query: 677 KANERDNIYRFGVVLLELVIRKQP 700
NE+ +++ GV+ EL++ P
Sbjct: 197 MHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 17/82 (20%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLA-------RLISDCKSHISTDVASAISYVPPEYGR 674
V +D+KA N+LL+ D + K+ DFG + +L + C A Y PE +
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC---------GAPPYAAPELFQ 186
Query: 675 ARKANERD-NIYRFGVVLLELV 695
+K + + +++ GV+L LV
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLV 208
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 35/135 (25%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKAN-- 679
+ +D+ A NIL+ E++ AK+ DFGL+R V + +P + N
Sbjct: 164 IHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYS 216
Query: 680 ---ERDNIYRFGVVLLELV---------------IRKQPTGPKFED--------KDIVVG 713
+++ +GV+L E+V K P G + E D++
Sbjct: 217 VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQ 276
Query: 714 CVSDNPIAKPGMLRV 728
C + P +P ++
Sbjct: 277 CWREKPYERPSFAQI 291
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPE--YGRARKA 678
+ +D+K N+L+N + + K+ DFGLAR S +V + + Y PP+ +G A+
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVT-LWYRPPDVLFG-AKLY 179
Query: 679 NERDNIYRFGVVLLELVIRKQPTGP 703
+ +++ G + EL +P P
Sbjct: 180 STSIDMWSAGCIFAELANAARPLFP 204
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 622 VKKDIKASNILLN---EDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKA 678
V +D+K NILL +D D K++DFGL+ + + + +A Y+ PE R
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-NTKMKDRIGTAY-YIAPEVLRG-TY 199
Query: 679 NERDNIYRFGVVL 691
+E+ +++ GV+L
Sbjct: 200 DEKCDVWSAGVIL 212
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 35/135 (25%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKAN-- 679
+ +D+ A NIL+ E++ AK+ DFGL+R V + +P + N
Sbjct: 154 IHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYS 206
Query: 680 ---ERDNIYRFGVVLLELV---------------IRKQPTGPKFED--------KDIVVG 713
+++ +GV+L E+V K P G + E D++
Sbjct: 207 VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQ 266
Query: 714 CVSDNPIAKPGMLRV 728
C + P +P ++
Sbjct: 267 CWREKPYERPSFAQI 281
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D+KA N+LL+ D + K+ DFG + + + + + Y PE + +K +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDEFCGSPPYAAPELFQGKKYDGP 192
Query: 682 D-NIYRFGVVLLELV 695
+ +++ GV+L LV
Sbjct: 193 EVDVWSLGVILYTLV 207
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 622 VKKDIKASNILLN---EDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKA 678
+ +D+K NI+L + K++D G A+ + + + T+ + Y+ PE +K
Sbjct: 144 IHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD--QGELCTEFVGTLQYLAPELLEQKKY 201
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFE 706
+ + FG + E + +P P ++
Sbjct: 202 TVTVDYWSFGTLAFECITGFRPFLPNWQ 229
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 622 VKKDIKASNILLN---EDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKA 678
+ +D+K NI+L + K++D G A+ + + + T+ + Y+ PE +K
Sbjct: 143 IHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD--QGELCTEFVGTLQYLAPELLEQKKY 200
Query: 679 NERDNIYRFGVVLLELVIRKQPTGPKFE 706
+ + FG + E + +P P ++
Sbjct: 201 TVTVDYWSFGTLAFECITGFRPFLPNWQ 228
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPE--YGRARKA 678
+ +D+K NIL+ + K+ DFG ARL++ + +VA+ Y PE G +
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR-WYRSPELLVGDTQYG 181
Query: 679 NERDNIYRFGVVLLELV 695
D ++ G V EL+
Sbjct: 182 PPVD-VWAIGCVFAELL 197
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKS---HISTDVASAISYVPPEYGRARKA 678
+ +D+KA+N+L+ D K+ DFGLAR S K+ + + + Y PPE
Sbjct: 147 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL----LL 202
Query: 679 NERD-----NIYRFGVVLLELVIR 697
ERD +++ G ++ E+ R
Sbjct: 203 GERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 17/82 (20%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLA-------RLISDCKSHISTDVASAISYVPPEYGR 674
V +D+KA N+LL+ D + K+ DFG + +L + C A Y PE +
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFC---------GAPPYAAPELFQ 185
Query: 675 ARKANERD-NIYRFGVVLLELV 695
+K + + +++ GV+L LV
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLV 207
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR + +V + P + +
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 190
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 191 AVDIWSLGCIFAEMVTRR 208
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K NILL+E + DF +A ++ ++ I+T +A Y+ PE +RK
Sbjct: 137 IHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQITT-MAGTKPYMAPEMFSSRKGAGY 194
Query: 682 D---NIYRFGVVLLELVIRKQP 700
+ + GV EL+ ++P
Sbjct: 195 SFAVDWWSLGVTAYELLRGRRP 216
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K +N+LL+E+ K+ DFGLA+ V + P AR
Sbjct: 134 LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVG 193
Query: 682 DNIYRFGVVLLELVIR 697
+++ G +L EL++R
Sbjct: 194 VDMWAVGCILAELLLR 209
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR + +V + P + +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 184
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 185 AVDIWSLGCIFAEMVTRR 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR + +V + P + +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 184 AVDIWSLGCIFAEMVTRR 201
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR + +V + P + +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 184 AVDIWSLGCIFAEMVTRR 201
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D+K NIL+ K+ DFGLAR+ S T V + Y PE
Sbjct: 142 VHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALTPVVVTLWYRAPEVLLQSTYATP 199
Query: 682 DNIYRFGVVLLELVIRK 698
+++ G + E+ RK
Sbjct: 200 VDMWSVGCIFAEMFRRK 216
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKS---HISTDVASAISYVPPEYGRARKA 678
+ +D+KA+N+L+ D K+ DFGLAR S K+ + + + Y PPE
Sbjct: 146 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL----LL 201
Query: 679 NERD-----NIYRFGVVLLELVIR 697
ERD +++ G ++ E+ R
Sbjct: 202 GERDYGPPIDLWGAGCIMAEMWTR 225
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFG A+L+ ++ K + + I ++ E R
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 200
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 201 QSDVWSYGVTVWELM 215
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFG A+L+ ++ K + + I ++ E R
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 200
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 201 QSDVWSYGVTVWELM 215
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEY--GRARKANER 681
+D+K N+L +E K++DFGL K + +++Y PE G++ +E
Sbjct: 132 RDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEA 191
Query: 682 DNIYRFGVVLLELVIRKQPTGPKFEDKDIVV 712
D ++ G++L L+ P F+D +++
Sbjct: 192 D-VWSMGILLYVLMCGFLP----FDDDNVMA 217
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR + +V + P + +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 184 AVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR + +V + P + +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 183 AVDIWSLGCIFAEMVTRR 200
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKS---HISTDVASAISYVPPEYGRARKA 678
+ +D+KA+N+L+ D K+ DFGLAR S K+ + + + Y PPE
Sbjct: 147 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL----LL 202
Query: 679 NERD-----NIYRFGVVLLELVIR 697
ERD +++ G ++ E+ R
Sbjct: 203 GERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR + +V + P + +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 184 AVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR + +V + P + +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 183 AVDIWSLGCIFAEMVTRR 200
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR + +V + P + +
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYST 190
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 191 AVDIWSLGCIFAEMVTRR 208
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR + +V + P + +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 183 AVDIWSLGCIFAEMVTRR 200
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFG A+L+ ++ K + + I ++ E R
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 200
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 201 QSDVWSYGVTVWELM 215
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKS---HISTDVASAISYVPPEYGRARKA 678
+ +D+KA+N+L+ D K+ DFGLAR S K+ + + + Y PPE
Sbjct: 147 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL----LL 202
Query: 679 NERD-----NIYRFGVVLLELVIR 697
ERD +++ G ++ E+ R
Sbjct: 203 GERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFG A+L+ ++ K + + I ++ E R
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 205
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 206 QSDVWSYGVTVWELM 220
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR + +V + P + +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 183 AVDIWSLGCIFAEMVTRR 200
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLA-RLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+ SN+LL + + K+ DFGLA +L + H + + +Y+ PE
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIATRSAHGL 191
Query: 681 RDNIYRFGVVLLELVIRKQP 700
+++ G + L+I + P
Sbjct: 192 ESDVWSLGCMFYTLLIGRPP 211
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 127 DLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCS 186
DL+KL+ LN+ N + ++NL +L L L NQL +G LT L TL L
Sbjct: 263 DLTKLKXLNVGSNQI--SDISVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQ 320
Query: 187 NSFTGEMPSELGDMKQLKSLDFS 209
N T P L + + S DF+
Sbjct: 321 NHITDIRP--LASLSKXDSADFA 341
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 101/252 (40%), Gaps = 48/252 (19%)
Query: 121 VSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLE 180
+SPL +L+K LNL N SP +SN L L++ E+++ P + LT L
Sbjct: 125 ISPL-ANLTKXYSLNLGANHNLSDLSP-LSNXTGLNYLTVTESKVKDVTP--IANLTDLY 180
Query: 181 TLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRXXXXXXXXXXXXXX 240
+LSL N E S L + L N P+
Sbjct: 181 SLSLNYNQI--EDISPLASLTSLHYFTAYVNQITDITPV--------------------- 217
Query: 241 XTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNF 300
N L+ L + NN ++ P +++L +L+ +G NQ S++ K+
Sbjct: 218 ------ANXTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQI-----SDINAVKDL 264
Query: 301 KSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYI 360
++ + G NQ+S S L +Q+ S++LNNNQ +G + L +
Sbjct: 265 T------KLKXLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTL 316
Query: 361 RLSNNKLSGSIP 372
LS N ++ P
Sbjct: 317 FLSQNHITDIRP 328
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 23/90 (25%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAI-----SYVPPE----- 671
V +D+K N++L++D K+ DFGL CK I Y+ PE
Sbjct: 274 VYRDLKLENLMLDKDGHIKITDFGL------CKEGIKDGATMKTFCGTPEYLAPEVLEDN 327
Query: 672 -YGRARKANERDNIYRFGVVLLELVIRKQP 700
YGRA + + GVV+ E++ + P
Sbjct: 328 DYGRAV------DWWGLGVVMYEMMCGRLP 351
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 23/90 (25%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAI-----SYVPPE----- 671
V +D+K N++L++D K+ DFGL CK I Y+ PE
Sbjct: 271 VYRDLKLENLMLDKDGHIKITDFGL------CKEGIKDGATMKTFCGTPEYLAPEVLEDN 324
Query: 672 -YGRARKANERDNIYRFGVVLLELVIRKQP 700
YGRA + + GVV+ E++ + P
Sbjct: 325 DYGRAV------DWWGLGVVMYEMMCGRLP 348
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK +N+ + K+ D GL R S K+ + + Y+ PE N +
Sbjct: 158 MHRDIKPANVFITATGVVKLGDLGLGRFFSS-KTTAAHSLVGTPYYMSPERIHENGYNFK 216
Query: 682 DNIYRFGVVLLELVIRKQP 700
+I+ G +L E+ + P
Sbjct: 217 SDIWSLGCLLYEMAALQSP 235
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFG A+L+ ++ K + + I ++ E R
Sbjct: 143 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 202
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 203 QSDVWSYGVTVWELM 217
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR + +V + P + +
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 187
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 188 AVDIWSLGCIFAEMVTRR 205
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLI-SDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+ A N+L+ K+ DFG A+L+ ++ K + + I ++ E R
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 198
Query: 681 RDNIYRFGVVLLELV 695
+ +++ +GV + EL+
Sbjct: 199 QSDVWSYGVTVWELM 213
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 30/126 (23%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-----AISYVPPE 671
GK +D+K+ NIL+ ++ + D GLA + S + + DV + Y+ PE
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQL--DVGNNPRVGTKRYMAPE 216
Query: 672 Y------GRARKANERDNIYRFGVVLLELVIRK----------------QPTGPKFEDKD 709
+ +R +I+ FG+VL E+ R P P FED
Sbjct: 217 VLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMR 276
Query: 710 IVVGCV 715
VV CV
Sbjct: 277 KVV-CV 281
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D+K NILL++ ++ D GLA + + ++ I V + + Y+ PE + +
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRVGT-VGYMAPEVVKNERYTFS 365
Query: 682 DNIYRFGVVLLELVIRKQP 700
+ + G +L E++ + P
Sbjct: 366 PDWWALGCLLYEMIAGQSP 384
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR + +V + P + +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYST 183
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 184 AVDIWSLGCIFAEMVTRR 201
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 624 KDIKASNILLNEDFDAKVLDFGLAR 648
+D+K SNILLN + KV DFGL+R
Sbjct: 133 RDMKPSNILLNAECHVKVADFGLSR 157
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 23/91 (25%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDV-----ASAISYVPPE---- 671
V +D+K N++L++D K+ DFGL CK I Y+ PE
Sbjct: 132 VVYRDLKLENLMLDKDGHIKITDFGL------CKEGIKDGATMKXFCGTPEYLAPEVLED 185
Query: 672 --YGRARKANERDNIYRFGVVLLELVIRKQP 700
YGRA + + GVV+ E++ + P
Sbjct: 186 NDYGRAV------DWWGLGVVMYEMMCGRLP 210
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 34/191 (17%)
Query: 403 TNLSQLEKLDLSSNMLT--GRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTXXXXXX 460
+L LE LDLS N L+ G + S++ L L+ FNG I M
Sbjct: 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLS---FNGVITMS----------- 389
Query: 461 XXXXXXXXXXPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIP--DLSYSHNYRK 518
L QL+ LD ++NL + +S+ S + N+ D+S++H
Sbjct: 390 -----------SNFLGLEQLEHLDFQHSNLKQ--MSEFSVFLSLRNLIYLDISHTHTRVA 436
Query: 519 FDLSYNMLSG-PIPKELGSCVVVLTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLN 577
F+ +N LS + K G+ ++P L L+LS +L L PT+F +L+
Sbjct: 437 FNGIFNGLSSLEVLKMAGNSFQ--ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS 494
Query: 578 GLTNLDLSYNE 588
L L+++ N+
Sbjct: 495 SLQVLNMASNQ 505
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 23/91 (25%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDV-----ASAISYVPPE---- 671
V +D+K N++L++D K+ DFGL CK I Y+ PE
Sbjct: 130 VVYRDLKLENLMLDKDGHIKITDFGL------CKEGIKDGATMKXFCGTPEYLAPEVLED 183
Query: 672 --YGRARKANERDNIYRFGVVLLELVIRKQP 700
YGRA + + GVV+ E++ + P
Sbjct: 184 NDYGRAV------DWWGLGVVMYEMMCGRLP 208
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 50/135 (37%), Gaps = 26/135 (19%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAIS---YVPPEY- 672
GK +D K+ N+L+ + + D GLA + S ++ + Y+ PE
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 673 -----GRARKANERDNIYRFGVVLLELVIRK----------------QPTGPKFEDKDIV 711
++ + +I+ FG+VL E+ R P P FED V
Sbjct: 190 DEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFEDMKKV 249
Query: 712 VGCVSDNPIAKPGML 726
V CV P L
Sbjct: 250 V-CVDQQTPTIPNRL 263
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D+K NILL++ ++ D GLA + + ++ I V + + Y+ PE + +
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRVGT-VGYMAPEVVKNERYTFS 365
Query: 682 DNIYRFGVVLLELVIRKQP 700
+ + G +L E++ + P
Sbjct: 366 PDWWALGCLLYEMIAGQSP 384
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 125 LFD-LSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLS 183
+FD L++L L L N L PS L +LK L L NQL LT L+TLS
Sbjct: 102 VFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLS 161
Query: 184 LCSNSFTGEMPSELGDMKQLKSLDFSGNGFN 214
L +N + +L+++ GN F+
Sbjct: 162 LSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 127 DLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGV---LTWLETLS 183
DL++L L L+ N L P +L +L L LG NQL SLPS GV LT L+ L
Sbjct: 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPS--GVFDRLTKLKELR 137
Query: 184 LCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPI----RLGEL 224
L +N + L++L S N +VP RLG+L
Sbjct: 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKL 181
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 24/155 (15%)
Query: 242 TVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFT---GSIQSELGNCK 298
+ +F +L L L ++NN L+ HL +L YLG NQ + L K
Sbjct: 75 SAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLK 134
Query: 299 NFKSVLAELQ------------IFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGR 346
+ +LQ + T S NQL + +++++ L NQF
Sbjct: 135 ELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF--- 191
Query: 347 IPLEVGNCSML---KYIRLSNNKLSGSIPRELNDS 378
+ C +L ++IR ++NK+ + L++S
Sbjct: 192 ---DCSRCEILYLSQWIRENSNKVKDGTGQNLHES 223
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 30/126 (23%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-----AISYVPPE 671
GK +D+K+ NIL+ ++ + D GLA + S + + DV + Y+ PE
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQL--DVGNNPRVGTKRYMAPE 187
Query: 672 Y------GRARKANERDNIYRFGVVLLELVIRK----------------QPTGPKFEDKD 709
+ +R +I+ FG+VL E+ R P P FED
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMR 247
Query: 710 IVVGCV 715
VV CV
Sbjct: 248 KVV-CV 252
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 27/125 (21%)
Query: 346 RIPLEVGNCSMLKYIRLSNNKL-SGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRC-- 402
++ L N S L+ + +S N L S + R +ES++ +NL NML+G++ RC
Sbjct: 394 KVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV----FRCLP 449
Query: 403 --------------------TNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFF 442
T+L L++L+++SN L L S+Q + L+ N +
Sbjct: 450 PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPW 509
Query: 443 NGSIP 447
+ + P
Sbjct: 510 DCTCP 514
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 15/158 (9%)
Query: 251 SLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIF 310
S ++L+ + N+ + ++ S LK+L L N + L KN S +
Sbjct: 354 SFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMT-KNMSS------LE 406
Query: 311 TFSAGMNQLSGPLPSWLGKWNQMESVW-LNNNQFIGRIPLEVGNC--SMLKYIRLSNNKL 367
T +N L+ W + V L++N G V C +K + L NN++
Sbjct: 407 TLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTG----SVFRCLPPKVKVLDLHNNRI 462
Query: 368 SGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNL 405
SIP+++ ++L E+N+ N L + VF R T+L
Sbjct: 463 -MSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSL 499
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 476 DLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPIPKELG 535
+++ L+ LD+S N+L+ + ++ + + +LS NML+G + + L
Sbjct: 401 NMSSLETLDVSLNSLNSHAYDRTCAWAESILV-----------LNLSSNMLTGSVFRCLP 449
Query: 536 SCVVVLTGY------IPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTNLDLSYNEF 589
V VL + IP+ + HL +LN++ N+L + F L L + L N +
Sbjct: 450 PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPW 509
Query: 590 D 590
D
Sbjct: 510 D 510
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 187 AVDIWSLGCIFAEMVTRR 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 187
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 188 AVDIWSLGCIFAEMVTRR 205
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 23/90 (25%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDV-----ASAISYVPPE----- 671
V +D+K N++L++D K+ DFGL CK I Y+ PE
Sbjct: 132 VYRDLKLENLMLDKDGHIKITDFGL------CKEGIKDGATMKXFCGTPEYLAPEVLEDN 185
Query: 672 -YGRARKANERDNIYRFGVVLLELVIRKQP 700
YGRA + + GVV+ E++ + P
Sbjct: 186 DYGRAV------DWWGLGVVMYEMMCGRLP 209
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+K NIL+ K+ DFGLAR+ S T V + Y PE
Sbjct: 141 VVHRDLKPQNILVTSSGQIKLADFGLARIYS--FQMALTSVVVTLWYRAPEVLLQSSYAT 198
Query: 681 RDNIYRFGVVLLELVIRK 698
+++ G + E+ RK
Sbjct: 199 PVDLWSVGCIFAEMFRRK 216
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 187 AVDIWSLGCIFAEMVTRR 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 185 AVDIWSLGCIFAEMVTRR 202
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 187 AVDIWSLGCIFAEMVTRR 204
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 187 AVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 186 AVDIWSLGCIFAEMVTRR 203
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPE 671
+ +D+K N+L+NE + K+ DFGLAR S +V + + Y PP+
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVT-LWYRPPD 170
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 187 AVDIWSLGCIFAEMVTRR 204
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 185 AVDIWSLGCIFAEMVTRR 202
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+K NIL+ K+ DFGLAR+ S T V + Y PE
Sbjct: 141 VVHRDLKPQNILVTSSGQIKLADFGLARIYS--FQMALTSVVVTLWYRAPEVLLQSSYAT 198
Query: 681 RDNIYRFGVVLLELVIRK 698
+++ G + E+ RK
Sbjct: 199 PVDLWSVGCIFAEMFRRK 216
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 125 LFD-LSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLS 183
+FD L++L L L N L PS L +LK L L NQL LT L+TLS
Sbjct: 102 VFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLS 161
Query: 184 LCSNSFTGEMPSELGDMKQLKSLDFSGNGFN 214
L +N + +L+++ GN F+
Sbjct: 162 LSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 127 DLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGV---LTWLETLS 183
DL++L L L+ N L P +L +L L LG NQL SLPS GV LT L+ L
Sbjct: 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPS--GVFDRLTKLKELR 137
Query: 184 LCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPI----RLGEL 224
L +N + L++L S N +VP RLG+L
Sbjct: 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKL 181
Score = 29.3 bits (64), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 24/155 (15%)
Query: 242 TVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFT---GSIQSELGNCK 298
+ +F +L L L ++NN L+ HL +L YLG NQ + L K
Sbjct: 75 SAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLK 134
Query: 299 NFKSVLAELQ------------IFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGR 346
+ +LQ + T S NQL + +++++ L NQF
Sbjct: 135 ELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF--- 191
Query: 347 IPLEVGNCSML---KYIRLSNNKLSGSIPRELNDS 378
+ C L ++IR ++NK+ + L++S
Sbjct: 192 ---DCSRCETLYLSQWIRENSNKVKDGTGQNLHES 223
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 186 AVDIWSLGCIFAEMVTRR 203
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 30/126 (23%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS-----AISYVPPE 671
GK +D+K+ NIL+ ++ + D GLA + S + + DV + Y+ PE
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQL--DVGNNPRVGTKRYMAPE 187
Query: 672 Y------GRARKANERDNIYRFGVVLLELVIRK----------------QPTGPKFEDKD 709
+ +R +I+ FG+VL E+ R P P FED
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMR 247
Query: 710 IVVGCV 715
VV CV
Sbjct: 248 KVV-CV 252
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 186 AVDIWSLGCIFAEMVTRR 203
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 187 AVDIWSLGCIFAEMVTRR 204
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 184 AVDIWSLGCIFAEMVTRR 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 185 AVDIWSLGCIFAEMVTRR 202
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 186 AVDIWSLGCIFAEMVTRR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 184 AVDIWSLGCIFAEMVTRR 201
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARL-ISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NI+LN K+ DFGL + I D ++ I Y+ PE N
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHD--GTVTHTFCGTIEYMAPEILMRSGHNR 200
Query: 681 RDNIYRFGVVLLELVIRKQP 700
+ + G ++ +++ P
Sbjct: 201 AVDWWSLGALMYDMLTGAPP 220
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 184 AVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 182
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 183 AVDIWSLGCIFAEMVTRR 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 185 AVDIWSLGCIFAEMVTRR 202
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
V +D+K NIL+ K+ DFGLAR+ S T V + Y PE
Sbjct: 141 VVHRDLKPQNILVTSSGQIKLADFGLARIYS--FQMALTSVVVTLWYRAPEVLLQSSYAT 198
Query: 681 RDNIYRFGVVLLELVIRK 698
+++ G + E+ RK
Sbjct: 199 PVDLWSVGCIFAEMFRRK 216
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 182
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 183 AVDIWSLGCIFAEMVTRR 200
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARL-ISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K NI+LN K+ DFGL + I D ++ I Y+ PE N
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHD--GTVTHXFCGTIEYMAPEILMRSGHNR 200
Query: 681 RDNIYRFGVVLLELVIRKQP 700
+ + G ++ +++ P
Sbjct: 201 AVDWWSLGALMYDMLTGAPP 220
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 184 AVDIWSLGCIFAEMVTRR 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K N+L+N + K+ DFGLAR +V + P + +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 681 RDNIYRFGVVLLELVIRK 698
+I+ G + E+V R+
Sbjct: 184 AVDIWSLGCIFAEMVTRR 201
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDV-ASAISYVPPEYG--- 673
K + +D+K SN+L+N K DFG++ + D ++ D+ A Y PE
Sbjct: 155 KLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVD---DVAKDIDAGCKPYXAPERINPE 211
Query: 674 -RARKANERDNIYRFGVVLLELVIRKQP 700
+ + + +I+ G+ +EL I + P
Sbjct: 212 LNQKGYSVKSDIWSLGITXIELAILRFP 239
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 53/135 (39%), Gaps = 35/135 (25%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKAN-- 679
+ +++ A NIL+ E++ AK+ DFGL+R V + +P + N
Sbjct: 161 IHRNLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYS 213
Query: 680 ---ERDNIYRFGVVLLELV---------------IRKQPTGPKFED--------KDIVVG 713
+++ +GV+L E+V K P G + E D++
Sbjct: 214 VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQ 273
Query: 714 CVSDNPIAKPGMLRV 728
C + P +P ++
Sbjct: 274 CWREKPYERPSFAQI 288
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK+ +ILL D K+ DFG +S V + P R E
Sbjct: 192 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 682 DNIYRFGVVLLELVIRKQP 700
D I+ G++++E+V + P
Sbjct: 252 D-IWSLGIMVIEMVDGEPP 269
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 127 DLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLP-SQLGVLTWLETLSLC 185
+LS L+ LNLS N G S +L++L L +L + P S L +L+ L+L
Sbjct: 371 NLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNLT 430
Query: 186 SNSFTGEMPSELGDMKQLKSLDFSGNGF-NGTVP-IRLGELTRXXXXXXXXXXXXXXXTV 243
L + L+ L+ GN F +GT+ L +
Sbjct: 431 YCFLDTSNQHLLAGLPVLRHLNLKGNHFQDGTITKTNLLQTVGSLEVLILSSCGLLSIDQ 490
Query: 244 SLFTNLQSLSYLDVSNNLLSGNIPPEISHLK 274
F +L +S++D+S+N L+ + +SHLK
Sbjct: 491 QAFHSLGKMSHVDLSHNSLTCDSIDSLSHLK 521
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGL-ARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K SNI L + K+ DFGL L +D K T + Y+ PE ++ +
Sbjct: 158 IHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGK 214
Query: 681 RDNIYRFGVVLLELV 695
++Y G++L EL+
Sbjct: 215 EVDLYALGLILAELL 229
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +DIK+ +ILL D K+ DFG +S V + P R E
Sbjct: 269 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 682 DNIYRFGVVLLELV 695
D I+ G++++E+V
Sbjct: 329 D-IWSLGIMVIEMV 341
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPE--YGRARKA 678
+ +D+K N+L+N + + K+ +FGLAR S +V + + Y PP+ +G A+
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVT-LWYRPPDVLFG-AKLY 179
Query: 679 NERDNIYRFGVVLLELVIRKQPTGP 703
+ +++ G + EL +P P
Sbjct: 180 STSIDMWSAGCIFAELANAGRPLFP 204
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFG-LARLISDCKSHISTDVASAISYVPPEY------GR 674
V +DIK NIL++ + ++ DFG +L+ D S V + Y+ PE G+
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTP-DYISPEILQAMEGGK 255
Query: 675 ARKANERDNIYRFGVVLLELVIRKQP 700
R E D + GV + E++ + P
Sbjct: 256 GRYGPECD-WWSLGVCMYEMLYGETP 280
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPE-------YGR 674
+ +DIK NIL+++ K+ DFG AR ++ + D + Y PE YG+
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLA-APGEVYDDEVATRWYRAPELLVGDVKYGK 204
Query: 675 ARKANERDNIYRFGVVLLELVIRKQPTGPKFEDKD 709
A +++ G ++ E+ + +P P D D
Sbjct: 205 AV------DVWAIGCLVTEMFM-GEPLFPGDSDID 232
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTD-VASAISYVPPEYGRARKANE 680
V +D+K NIL+ K+ DFGLAR+ S ++ D V + Y PE
Sbjct: 134 VHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALDPVVVTLWYRAPEVLLQSTYAT 190
Query: 681 RDNIYRFGVVLLELVIRK 698
+++ G + E+ RK
Sbjct: 191 PVDMWSVGCIFAEMFRRK 208
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK+ +ILL D K+ DFG +S V + P R E
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 681 RDNIYRFGVVLLELV 695
D I+ G++++E+V
Sbjct: 208 VD-IWSLGIMVIEMV 221
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK+ +ILL D K+ DFG +S V + P R E
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 200
Query: 681 RDNIYRFGVVLLELVIRKQP 700
D I+ G++++E+V + P
Sbjct: 201 VD-IWSLGIMVIEMVDGEPP 219
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPE 671
V +D+K +NILL+E ++ D GLA S K H S Y+ PE
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH---GYMAPE 359
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPE 671
V +D+K +NILL+E ++ D GLA S K H S Y+ PE
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH---GYMAPE 360
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPE 671
V +D+K +NILL+E ++ D GLA S K H S Y+ PE
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH---GYMAPE 360
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPE 671
V +D+K +NILL+E ++ D GLA S K H S Y+ PE
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH---GYMAPE 360
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK+ +ILL D K+ DFG +S V + P R E
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 681 RDNIYRFGVVLLELV 695
D I+ G++++E+V
Sbjct: 206 VD-IWSLGIMVIEMV 219
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGL-ARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +D+K SNI L + K+ DFGL L +D K S + Y+ PE ++ +
Sbjct: 144 INRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS---KGTLRYMSPEQISSQDYGK 200
Query: 681 RDNIYRFGVVLLELV 695
++Y G++L EL+
Sbjct: 201 EVDLYALGLILAELL 215
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 621 AVKKDIKASNILLN-EDFDAKVLDFGLARLISDCKSH 656
+ +D+K +N+ +N ED K+ DFGLAR++ SH
Sbjct: 141 VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH 177
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 20/103 (19%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHI-----STDVASAISYVPPEYGRAR 676
+ +D+K N+LL+ + K+ D+G+ CK + ++ +Y+ PE R
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGM------CKEGLRPGDTTSTFCGTPNYIAPEILRGE 228
Query: 677 KANERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNP 719
+ + GV++ E++ + P +VG SDNP
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGRSPFD--------IVGS-SDNP 262
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK+ +ILL D K+ DFG +S V + P R E
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 196
Query: 681 RDNIYRFGVVLLELV 695
D I+ G++++E+V
Sbjct: 197 VD-IWSLGIMVIEMV 210
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680
+ +DIK+ +ILL D K+ DFG +S V + P R E
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 681 RDNIYRFGVVLLELVIRKQP 700
D I+ G++++E++ + P
Sbjct: 222 VD-IWSLGIMVIEMIDGEPP 240
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 3/155 (1%)
Query: 125 LFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLP-SQLGVLTWLETLS 183
L +L L+ LNLS N G +L++L + L P S L L L+
Sbjct: 371 LKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLN 430
Query: 184 LCSNSFTGEMPSELGDMKQLKSLDFSGNGF-NGTVP-IRLGELTRXXXXXXXXXXXXXXX 241
L L ++ L+ L+ GN F +G++ L ++
Sbjct: 431 LSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSI 490
Query: 242 TVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKL 276
F L+++++LD+S+N L+G+ +SHLK L
Sbjct: 491 DQQAFHGLRNVNHLDLSHNSLTGDSMDALSHLKGL 525
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 14/88 (15%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTD----------VASAIS---YV 668
+ +D+K NI ++E + K+ DFGLA+ + + D + SAI YV
Sbjct: 138 IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYV 197
Query: 669 PPEY-GRARKANERDNIYRFGVVLLELV 695
E NE+ ++Y G++ E++
Sbjct: 198 ATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLA----RLISDCKSHISTDVASAISYVPPEYGRARK 677
+ +D+KA N+L+ + D ++ DFG++ + + S I T A V E +
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 190
Query: 678 ANERDNIYRFGVVLLELVIRKQP 700
+ + +I+ G+ L+E+ + P
Sbjct: 191 YDYKADIWSLGITLIEMAQIEPP 213
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 20/103 (19%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHI-----STDVASAISYVPPEYGRAR 676
+ +D+K N+LL+ + K+ D+G+ CK + ++ +Y+ PE R
Sbjct: 128 IYRDLKLDNVLLDSEGHIKLTDYGM------CKEGLRPGDTTSXFCGTPNYIAPEILRGE 181
Query: 677 KANERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNP 719
+ + GV++ E++ + P +VG SDNP
Sbjct: 182 DYGFSVDWWALGVLMFEMMAGRSPFD--------IVGS-SDNP 215
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 20/103 (19%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHI-----STDVASAISYVPPEYGRAR 676
+ +D+K N+LL+ + K+ D+G+ CK + ++ +Y+ PE R
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGM------CKEGLRPGDTTSXFCGTPNYIAPEILRGE 185
Query: 677 KANERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNP 719
+ + GV++ E++ + P +VG SDNP
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRSPFD--------IVGS-SDNP 219
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 14/88 (15%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTD----------VASAIS---YV 668
+ +D+K NI ++E + K+ DFGLA+ + + D + SAI YV
Sbjct: 138 IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYV 197
Query: 669 PPEY-GRARKANERDNIYRFGVVLLELV 695
E NE+ ++Y G++ E++
Sbjct: 198 ATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 20/103 (19%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHI-----STDVASAISYVPPEYGRAR 676
+ +D+K N+LL+ + K+ D+G+ CK + ++ +Y+ PE R
Sbjct: 143 IYRDLKLDNVLLDSEGHIKLTDYGM------CKEGLRPGDTTSXFCGTPNYIAPEILRGE 196
Query: 677 KANERDNIYRFGVVLLELVIRKQPTGPKFEDKDIVVGCVSDNP 719
+ + GV++ E++ + P +VG SDNP
Sbjct: 197 DYGFSVDWWALGVLMFEMMAGRSPFD--------IVGS-SDNP 230
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D+K NIL+ K+ DFGLAR+ S V + Y PE
Sbjct: 134 VHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALAPVVVTLWYRAPEVLLQSTYATP 191
Query: 682 DNIYRFGVVLLELVIRK 698
+++ G + E+ RK
Sbjct: 192 VDMWSVGCIFAEMFRRK 208
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLA----RLISDCKSHISTDVASAISYVPPEYGRARK 677
+ +D+KA N+L+ + D ++ DFG++ + + S I T A V E +
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 198
Query: 678 ANERDNIYRFGVVLLELVIRKQP 700
+ + +I+ G+ L+E+ + P
Sbjct: 199 YDYKADIWSLGITLIEMAQIEPP 221
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFG----LARLISDCKSHISTDVASAISYVPPEYGRARK 677
+ +DIK N+LL E+ + K++DFG L R + + I T A + +
Sbjct: 151 IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDAT 210
Query: 678 ANERDNIYRFGVVLLELV 695
+ + +++ G+ +E+
Sbjct: 211 YDFKSDLWSLGITAIEMA 228
>pdb|4ARN|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|C Chain C, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|D Chain D, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARR|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
pdb|4ARR|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
Length = 279
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 53/133 (39%), Gaps = 5/133 (3%)
Query: 62 DFIIFNFNSLMMGKLRLRQPYKTLSRRLGLAIANALKDLEELLLRVVYQVLRTQSLKGPV 121
D + N + +L + ++ +RRL AN L D+ L + LR + P
Sbjct: 108 DNLGMNITRQHLDRLHGLKRFRFTTRRLTHIPANLLTDMRNL----SHLELRANIEEMP- 162
Query: 122 SPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLET 181
S L DL L + N L P + +LK L+L NQL LT L+
Sbjct: 163 SHLFDDLENLESIEFGSNKLRQMPRGIFGKMPKLKQLNLASNQLKSVPDGIFDRLTSLQK 222
Query: 182 LSLCSNSFTGEMP 194
+ L +N + P
Sbjct: 223 IWLHTNPWDCSCP 235
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 375 LNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEI-GNLRSIQ 433
+D E+L I N L +FG+ + +L++L+L+SN L +P I L S+Q
Sbjct: 166 FDDLENLESIEFGSNKLRQMPRGIFGK---MPKLKQLNLASNQLKS-VPDGIFDRLTSLQ 221
Query: 434 ILKLNSNFFNGSIP 447
+ L++N ++ S P
Sbjct: 222 KIWLHTNPWDCSCP 235
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPE 671
V +D+K NILL++D + K+ DFG + + + +V SY+ PE
Sbjct: 146 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPE 193
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPE 671
V +D+K NILL++D + K+ DFG + + + +V SY+ PE
Sbjct: 133 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPE 180
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D+K NIL+ K+ DFGLAR+ S + V + Y PE
Sbjct: 134 VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP--VVVTLWYRAPEVLLQSTYATP 191
Query: 682 DNIYRFGVVLLELVIRK 698
+++ G + E+ RK
Sbjct: 192 VDMWSVGCIFAEMFRRK 208
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPE 671
V +D+K NILL++D + K+ DFG + + + S V SY+ PE
Sbjct: 146 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS--VCGTPSYLAPE 193
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 16/88 (18%)
Query: 622 VKKDIKASNILLNEDFDA-KVLDFGLARLISDCKSHISTDVASAISYVPPE--------Y 672
V +DIK N+L+N K+ DFG ++ ++ T + Y+ PE Y
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEIIDKGPRGY 202
Query: 673 GRARKANERDNIYRFGVVLLELVIRKQP 700
G+A +I+ G ++E+ K P
Sbjct: 203 GKAA------DIWSLGCTIIEMATGKPP 224
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 338 LNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDS-ESLVEINLDGNMLSGTIE 396
L+ NQ P + + L Y+ L N+L S+P+ + D SL E+ L N L E
Sbjct: 116 LDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPE 174
Query: 397 DVFGRCTNLSQLEKLDLSSNMLTGRIPK-EIGNLRSIQILKLNSNFFNGSI 446
F + L++L+ L L +N L R+P+ +L +++L+L N ++ +
Sbjct: 175 GAFDK---LTELKTLKLDNNQLK-RVPEGAFDSLEKLKMLQLQENPWDCTC 221
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+++++ KV DFGLA+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELVIRKQP 700
+ + GV++ E+ P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 16/88 (18%)
Query: 622 VKKDIKASNILLNEDFDA-KVLDFGLARLISDCKSHISTDVASAISYVPPE--------Y 672
V +DIK N+L+N K+ DFG ++ ++ T + Y+ PE Y
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEIIDKGPRGY 188
Query: 673 GRARKANERDNIYRFGVVLLELVIRKQP 700
G+A +I+ G ++E+ K P
Sbjct: 189 GKAA------DIWSLGCTIIEMATGKPP 210
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 130/308 (42%), Gaps = 53/308 (17%)
Query: 249 LQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKN------FKS 302
L +L+ ++ SNN L+ P + +L KL D + NQ + L N N F +
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADI--TPLANLTNLTGLTLFNN 117
Query: 303 VLAELQIFTFSAGMNQL---SGPLP--SWLGKWNQMESVWLNNNQFIGRIPLEVGNCSML 357
+ ++ +N+L S + S L ++ + ++NQ PL N + L
Sbjct: 118 QITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKPL--ANLTTL 175
Query: 358 KYIRLSNNKLSG-SIPRELNDSESLV-------------------EINLDGNMLSGTIED 397
+ + +S+NK+S S+ +L + ESL+ E++L+GN L
Sbjct: 176 ERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKD---- 231
Query: 398 VFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTXXX 457
G +L+ L LDL++N ++ P + L + LKL +N + P L T
Sbjct: 232 -IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 286
Query: 458 XXXXXXXXXXXXXPEKIADLAQLQFLDLSYNNLS--RPI--LSK-HSSYFHEVNIPDLSY 512
P I++L L +L L +NN+S P+ L+K +F+ + D+S
Sbjct: 287 NLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSS 344
Query: 513 SHNYRKFD 520
N +
Sbjct: 345 LANLTNIN 352
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLA-RLISDCKS---HISTDVASAISYVPPEY 672
GK +D+K+ NIL+ ++ + D GLA + ISD +T V + Y+PPE
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTK-RYMPPEV 217
Query: 673 ------GRARKANERDNIYRFGVVLLELVIR 697
++ ++Y FG++L E+ R
Sbjct: 218 LDESLNRNHFQSYIMADMYSFGLILWEVARR 248
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA----TWTLCGTPEYLAPEIILSKGYNKA 239
Query: 682 DNIYRFGVVLLELVIRKQP 700
+ + GV++ E+ P
Sbjct: 240 VDWWALGVLIYEMAAGYPP 258
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + +A Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLAGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH-ISTDVASAISYVPPEYGRARKANE 680
V KD+ N+L+ + + K+ D GL R + + + + I ++ PE K +
Sbjct: 167 VHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSI 226
Query: 681 RDNIYRFGVVLLEL 694
+I+ +GVVL E+
Sbjct: 227 DSDIWSYGVVLWEV 240
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSH-ISTDVASAISYVPPEYGRARKANE 680
V KD+ N+L+ + + K+ D GL R + + + + I ++ PE K +
Sbjct: 150 VHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSI 209
Query: 681 RDNIYRFGVVLLEL 694
+I+ +GVVL E+
Sbjct: 210 DSDIWSYGVVLWEV 223
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 18/126 (14%)
Query: 477 LAQLQFLDLSYNNLSRPILSKHSS-----YFHEVNIPDLSYSHNYRKFDLSYNMLSGPIP 531
L +L+ LDL +NNL+R L KH++ YF + LS+ H ++ + +
Sbjct: 503 LEKLEILDLQHNNLAR--LWKHANPGGPIYF----LKGLSHLHILNLESNGFDEIPVEVF 556
Query: 532 KELGSCVVVLTGY-----IPRSLGHLSCSVK-LNLSGNKLSVLVPTSFG-NLNGLTNLDL 584
K+L ++ G +P S+ + S+K LNL N ++ + FG LT LD+
Sbjct: 557 KDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDM 616
Query: 585 SYNEFD 590
+N FD
Sbjct: 617 RFNPFD 622
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ KV DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELVIRKQP 700
+ + GV++ E+ P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 48/274 (17%)
Query: 249 LQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKN------FKS 302
L +L+ ++ SNN L+ P + +L KL D + NQ + L N N F +
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADI--TPLANLTNLTGLTLFNN 117
Query: 303 VLAELQIFTFSAGMNQL---SGPLP--SWLGKWNQMESVWLNNNQFIGRIPLEVGNCSML 357
+ ++ +N+L S + S L ++ + ++NQ PL N + L
Sbjct: 118 QITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKPL--ANLTTL 175
Query: 358 KYIRLSNNKLSG-SIPRELNDSESLV-------------------EINLDGNMLSGTIED 397
+ + +S+NK+S S+ +L + ESL+ E++L+GN L
Sbjct: 176 ERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKD---- 231
Query: 398 VFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTXXX 457
G +L+ L LDL++N ++ P + L + LKL +N + P L T
Sbjct: 232 -IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 286
Query: 458 XXXXXXXXXXXXXPEKIADLAQLQFLDLSYNNLS 491
P I++L L +L L +NN+S
Sbjct: 287 NLELNENQLEDISP--ISNLKNLTYLTLYFNNIS 318
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ KV DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L++E +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 150 IYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 205
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 206 VDWWALGVLIYEMA 219
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ KV DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 130/308 (42%), Gaps = 53/308 (17%)
Query: 249 LQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKN------FKS 302
L +L+ ++ SNN L+ P + +L KL D + NQ + L N N F +
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADI--TPLANLTNLTGLTLFNN 117
Query: 303 VLAELQIFTFSAGMNQL---SGPLP--SWLGKWNQMESVWLNNNQFIGRIPLEVGNCSML 357
+ ++ +N+L S + S L ++ + ++NQ PL N + L
Sbjct: 118 QITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPL--ANLTTL 175
Query: 358 KYIRLSNNKLSG-SIPRELNDSESLV-------------------EINLDGNMLSGTIED 397
+ + +S+NK+S S+ +L + ESL+ E++L+GN L
Sbjct: 176 ERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKD---- 231
Query: 398 VFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTXXX 457
G +L+ L LDL++N ++ P + L + LKL +N + P L T
Sbjct: 232 -IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 286
Query: 458 XXXXXXXXXXXXXPEKIADLAQLQFLDLSYNNLS--RPI--LSK-HSSYFHEVNIPDLSY 512
P I++L L +L L +NN+S P+ L+K +F+ + D+S
Sbjct: 287 NLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSS 344
Query: 513 SHNYRKFD 520
N +
Sbjct: 345 LANLTNIN 352
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 18/126 (14%)
Query: 477 LAQLQFLDLSYNNLSRPILSKHSS-----YFHEVNIPDLSYSHNYRKFDLSYNMLSGPIP 531
L +L+ LDL +NNL+R L KH++ YF + LS+ H ++ + +
Sbjct: 513 LEKLEILDLQHNNLAR--LWKHANPGGPIYF----LKGLSHLHILNLESNGFDEIPVEVF 566
Query: 532 KELGSCVVVLTGY-----IPRSLGHLSCSVK-LNLSGNKLSVLVPTSFG-NLNGLTNLDL 584
K+L ++ G +P S+ + S+K LNL N ++ + FG LT LD+
Sbjct: 567 KDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDM 626
Query: 585 SYNEFD 590
+N FD
Sbjct: 627 RFNPFD 632
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 18/126 (14%)
Query: 477 LAQLQFLDLSYNNLSRPILSKHSS-----YFHEVNIPDLSYSHNYRKFDLSYNMLSGPIP 531
L +L+ LDL +NNL+R L KH++ YF + LS+ H ++ + +
Sbjct: 508 LEKLEILDLQHNNLAR--LWKHANPGGPIYF----LKGLSHLHILNLESNGFDEIPVEVF 561
Query: 532 KELGSCVVVLTGY-----IPRSLGHLSCSVK-LNLSGNKLSVLVPTSFG-NLNGLTNLDL 584
K+L ++ G +P S+ + S+K LNL N ++ + FG LT LD+
Sbjct: 562 KDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDM 621
Query: 585 SYNEFD 590
+N FD
Sbjct: 622 RFNPFD 627
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ KV DFG A+ + + + Y+ PE ++ N+
Sbjct: 164 IYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 219
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 220 VDWWALGVLIYEMA 233
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
V +D+K NILL+ + DFGL + + S ST + Y+ PE + +
Sbjct: 161 VYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTP-EYLAPEVLHKQPYDRT 219
Query: 682 DNIYRFGVVLLELV 695
+ + G VL E++
Sbjct: 220 VDWWCLGAVLYEML 233
>pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
Iii Effector Xcv3220 (Xopl)
Length = 328
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 22/107 (20%)
Query: 344 IGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFG--- 400
I +P + N LK +++ N+ LS P ++ L E++L G +FG
Sbjct: 195 IRSLPASIANLQNLKSLKIRNSPLSALGP-AIHHLPKLEELDLRGCTALRNYPPIFGGRA 253
Query: 401 --------RCTNL----------SQLEKLDLSSNMLTGRIPKEIGNL 429
C+NL +QLEKLDL + R+P I L
Sbjct: 254 PLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQL 300
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRAR----- 676
V +DIK N+LL+ + ++ DFG ++D + S+ Y+ PE +A
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 677 KANERDNIYRFGVVLLELVIRKQP 700
K + + GV + E++ + P
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 30.4 bits (67), Expect = 4.1, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 362 LSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGR 421
L+NN+++ P + +L ++ + N L+ VF + L+QL +LDL+ N L
Sbjct: 40 LNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDK---LTQLTQLDLNDNHLKS- 95
Query: 422 IPK-EIGNLRSIQILKLNSN 440
IP+ NL+S+ + L +N
Sbjct: 96 IPRGAFDNLKSLTHIYLYNN 115
Score = 29.3 bits (64), Expect = 8.7, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 334 ESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDS-ESLVEINLDGNMLS 392
+ +WLNNNQ P + L+ + ++NKL+ +IP + D L +++L+ N L
Sbjct: 36 QRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDLNDNHLK 94
Query: 393 GTIEDVFGRCTNLSQLEKLDLSSN 416
F NL L + L +N
Sbjct: 95 SIPRGAF---DNLKSLTHIYLYNN 115
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+++++ KV DFG A+ + + + Y+ PE ++ N+
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 219
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 220 VDWWALGVLIYEMA 233
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+++++ KV DFG A+ + + + Y+ PE ++ N+
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 219
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 220 VDWWALGVLIYEMA 233
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+++++ KV DFG A+ + + + Y+ PE ++ N+
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 219
Query: 682 DNIYRFGVVLLELVIRKQP 700
+ + GV++ E+ P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+++++ KV DFG A+ + + + Y+ PE ++ N+
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 219
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 220 VDWWALGVLIYEMA 233
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+++++ KV DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+++++ KV DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRAR----- 676
V +DIK N+LL+ + ++ DFG ++D + S+ Y+ PE +A
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 677 KANERDNIYRFGVVLLELVIRKQP 700
K + + GV + E++ + P
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 17/162 (10%)
Query: 128 LSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGE----NQLSGSLPSQLGVLTWLETLS 183
LSKL+ L L N + PS + + L+ L LGE + +S L L +L L+
Sbjct: 135 LSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLN-LA 193
Query: 184 LCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRXXXXXXXXXXXXXXXTV 243
+C+ E+P+ L + +L LD SGN + IR G +
Sbjct: 194 MCN---LREIPN-LTPLIKLDELDLSGNHLSA---IRPGSFQGLMHLQKLWMIQSQIQVI 246
Query: 244 --SLFTNLQSLSYLDVSNN---LLSGNIPPEISHLKKLSDHY 280
+ F NLQSL +++++N LL ++ + HL+++ H+
Sbjct: 247 ERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH 288
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 357 LKYIRLSNNKLSGSIPRELNDS-ESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSS 415
L Y+ L +N+L S+P+ + D +L ++LD N L E VF + T QL++L L+
Sbjct: 135 LTYLYLYHNQLQ-SLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLT---QLKQLSLND 190
Query: 416 NML 418
N L
Sbjct: 191 NQL 193
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+++++ +V DFGLA+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELVIRKQP 700
+ + GV++ E+ P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 558 LNLSGNKLSVLVPTSFGNLNGLTNLDLSYNEF 589
LNL+ N+L L F L LT LDLSYN+
Sbjct: 138 LNLAHNQLQSLPKGVFDKLTNLTELDLSYNQL 169
>pdb|3M6A|A Chain A, Crystal Structure Of Bacillus Subtilis Lon C-Terminal
Domain
pdb|3M6A|B Chain B, Crystal Structure Of Bacillus Subtilis Lon C-Terminal
Domain
pdb|3M6A|C Chain C, Crystal Structure Of Bacillus Subtilis Lon C-Terminal
Domain
pdb|3M6A|D Chain D, Crystal Structure Of Bacillus Subtilis Lon C-Terminal
Domain
pdb|3M6A|E Chain E, Crystal Structure Of Bacillus Subtilis Lon C-Terminal
Domain
pdb|3M6A|F Chain F, Crystal Structure Of Bacillus Subtilis Lon C-Terminal
Domain
Length = 543
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 11/115 (9%)
Query: 11 KRGGFGSIQLRIQRIELRGSPQEAKSVPLDLQNH----PMRSKEQFNIKNAIQAFDFIIF 66
K G G +Q ++IE G P K L N P S E I+N I +
Sbjct: 3 KEGKTGEVQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDW--LVAL 60
Query: 67 NFNSLMMGKLRLRQPYKTLSRRLGLAIANALKDLEELLLRVVYQVLRTQSLKGPV 121
+ KL L++ + L + L+ ++E +L + T+SLKGP+
Sbjct: 61 PWTDETDDKLDLKEAGRLLDEE-----HHGLEKVKERILEYLAVQKLTKSLKGPI 110
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 239
Query: 682 DNIYRFGVVLLELVIRKQP 700
+ + GV++ E+ P
Sbjct: 240 VDWWALGVLIYEMAAGYPP 258
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + K T + Y+ PE ++ N+
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWT-LCGTPEYLAPEIILSKGYNKA 219
Query: 682 DNIYRFGVVLLELVIRKQP 700
+ + GV++ E+ P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 239
Query: 682 DNIYRFGVVLLELVIRKQP 700
+ + GV++ E+ P
Sbjct: 240 VDWWALGVLIYEMAAGYPP 258
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + K T + Y+ PE ++ N+
Sbjct: 149 IYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWT-LCGTPEYLAPEIILSKGYNKA 204
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 205 VDWWALGVLIYEMA 218
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 219
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 220 VDWWALGVLIYEMA 233
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 38/205 (18%)
Query: 341 NQFIGRIPLEVGNCSMLKYIRLSNNKLSG-SIPRELNDSESLV----------------- 382
NQ PL N + L+ + +S+NK+S S+ +L + ESL+
Sbjct: 160 NQVTDLKPL--ANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 217
Query: 383 --EINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSN 440
E++L+GN L G +L+ L LDL++N ++ P + L + LKL +N
Sbjct: 218 LDELSLNGNQLKD-----IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGAN 270
Query: 441 FFNGSIPMRLGDSTXXXXXXXXXXXXXXXXPEKIADLAQLQFLDLSYNNLS--RPI--LS 496
+ P L T P I++L L +L L +NN+S P+ L+
Sbjct: 271 QISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLT 326
Query: 497 K-HSSYFHEVNIPDLSYSHNYRKFD 520
K +F+ + D+S N +
Sbjct: 327 KLQRLFFYNNKVSDVSSLANLTNIN 351
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 219
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 220 VDWWALGVLIYEMA 233
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 29.6 bits (65), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 29.6 bits (65), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 156 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 211
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 212 VDWWALGVLIYEMA 225
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 219
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 220 VDWWALGVLIYEMA 233
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 219
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 220 VDWWALGVLIYEMA 233
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 38/205 (18%)
Query: 341 NQFIGRIPLEVGNCSMLKYIRLSNNKLSG-SIPRELNDSESLV----------------- 382
NQ PL N + L+ + +S+NK+S S+ +L + ESL+
Sbjct: 165 NQVTDLKPL--ANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 222
Query: 383 --EINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSN 440
E++L+GN L +D+ G +L+ L LDL++N ++ P + L + LKL +N
Sbjct: 223 LDELSLNGNQL----KDI-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGAN 275
Query: 441 FFNGSIPMRLGDSTXXXXXXXXXXXXXXXXPEKIADLAQLQFLDLSYNNLS--RPI--LS 496
+ P L T P I++L L +L L +NN+S P+ L+
Sbjct: 276 QISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLT 331
Query: 497 K-HSSYFHEVNIPDLSYSHNYRKFD 520
K +F+ + D+S N +
Sbjct: 332 KLQRLFFYNNKVSDVSSLANLTNIN 356
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 156 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 211
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 212 VDWWALGVLIYEMA 225
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 219
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 220 VDWWALGVLIYEMA 233
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 219
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 220 VDWWALGVLIYEMA 233
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 158 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 213
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 214 VDWWALGVLIYEMA 227
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 50/212 (23%)
Query: 341 NQFIGRIPLEVGNCSMLKYIRLSNNKLSG-SIPRELNDSESLV----------------- 382
NQ PL N + L+ + +S+NK+S S+ +L + ESL+
Sbjct: 160 NQVTDLKPL--ANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 217
Query: 383 --EINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSN 440
E++L+GN L G +L+ L LDL++N ++ P + L + LKL +N
Sbjct: 218 LDELSLNGNQLKD-----IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGAN 270
Query: 441 FFNGSIPMRLGDSTXXXXXXXXXXXXXXXXPEKIADLAQLQFLDLSYNNLS--RPI---- 494
+ P L T P I++L L +L L +NN+S P+
Sbjct: 271 QISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLT 326
Query: 495 -----------LSKHSSYFHEVNIPDLSYSHN 515
+S SS + NI LS HN
Sbjct: 327 KLQRLFFSNNKVSDVSSLANLTNINWLSAGHN 358
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 622 VKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANER 681
+ +D+K N+L+++ +V DFG A+ + + + Y+ PE ++ N+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKA 218
Query: 682 DNIYRFGVVLLELV 695
+ + GV++ E+
Sbjct: 219 VDWWALGVLIYEMA 232
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 29.3 bits (64), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 50/212 (23%)
Query: 341 NQFIGRIPLEVGNCSMLKYIRLSNNKLSG-SIPRELNDSESLV----------------- 382
NQ PL N + L+ + +S+NK+S S+ +L + ESL+
Sbjct: 164 NQVTDLKPL--ANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 221
Query: 383 --EINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSN 440
E++L+GN L +D+ G +L+ L LDL++N ++ P + L + LKL +N
Sbjct: 222 LDELSLNGNQL----KDI-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGAN 274
Query: 441 FFNGSIPMRLGDSTXXXXXXXXXXXXXXXXPEKIADLAQLQFLDLSYNNLS--RPI---- 494
+ P L T P I++L L +L L +NN+S P+
Sbjct: 275 QISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLT 330
Query: 495 -----------LSKHSSYFHEVNIPDLSYSHN 515
+S SS + NI LS HN
Sbjct: 331 KLQRLFFANNKVSDVSSLANLTNINWLSAGHN 362
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 29.3 bits (64), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 549 LGHLSCSVKLNLSGNKL-SVLVPTSFGNLNGLTNLDLSYN 587
+G L KLN++ N + S +P F NL L ++DLSYN
Sbjct: 119 IGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 158
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
Query: 125 LFD-LSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGV---LTWLE 180
+FD L++L L+LSQN + P L +L +L L EN+L SLP+ GV LT L+
Sbjct: 47 VFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQ-SLPN--GVFDKLTQLK 103
Query: 181 TLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTR 226
L+L +N + L+ + N ++ + P R+ L+R
Sbjct: 104 ELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP-RIDYLSR 148
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 549 LGHLSCSVKLNLSGNKL-SVLVPTSFGNLNGLTNLDLSYN 587
+G L KLN++ N + S +P F NL L ++DLSYN
Sbjct: 124 IGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,412,256
Number of Sequences: 62578
Number of extensions: 755985
Number of successful extensions: 3269
Number of sequences better than 100.0: 895
Number of HSP's better than 100.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 239
Number of HSP's that attempted gapping in prelim test: 1809
Number of HSP's gapped (non-prelim): 1240
length of query: 729
length of database: 14,973,337
effective HSP length: 106
effective length of query: 623
effective length of database: 8,340,069
effective search space: 5195862987
effective search space used: 5195862987
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)