Query 046589
Match_columns 729
No_of_seqs 577 out of 3733
Neff 9.1
Searched_HMMs 29240
Date Tue Mar 26 00:13:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046589.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046589hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.9E-58 6.5E-63 546.1 35.0 470 104-591 177-718 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.6E-55 5.6E-60 521.0 36.0 456 104-587 199-737 (768)
3 3t6q_A CD180 antigen; protein- 100.0 1.1E-49 3.8E-54 459.8 38.9 470 104-591 32-537 (606)
4 3t6q_A CD180 antigen; protein- 100.0 2.4E-48 8.1E-53 448.7 42.5 463 109-591 16-514 (606)
5 1ziw_A TOLL-like receptor 3; i 100.0 2.1E-47 7.2E-52 446.8 41.7 467 105-591 25-574 (680)
6 1ziw_A TOLL-like receptor 3; i 100.0 1.2E-46 4.1E-51 440.4 40.9 470 105-591 49-598 (680)
7 3vq2_A TLR4, TOLL-like recepto 100.0 1.3E-47 4.5E-52 442.5 32.1 462 104-591 31-535 (606)
8 3j0a_A TOLL-like receptor 5; m 100.0 8.6E-46 2.9E-50 442.3 38.3 463 103-591 22-540 (844)
9 4eco_A Uncharacterized protein 100.0 6.7E-47 2.3E-51 437.4 27.8 425 83-590 64-600 (636)
10 3vq2_A TLR4, TOLL-like recepto 100.0 3E-46 1E-50 431.1 31.4 452 104-591 55-559 (606)
11 2z63_A TOLL-like receptor 4, v 100.0 5.6E-46 1.9E-50 425.6 33.0 452 104-591 27-532 (570)
12 3j0a_A TOLL-like receptor 5; m 100.0 2.1E-45 7.3E-50 438.9 33.5 437 104-591 47-561 (844)
13 4ecn_A Leucine-rich repeat pro 100.0 1.5E-45 5E-50 433.7 29.2 441 89-589 315-863 (876)
14 2z7x_B TOLL-like receptor 1, v 100.0 2.3E-45 7.9E-50 415.7 25.7 437 108-591 3-482 (520)
15 2z81_A CD282 antigen, TOLL-lik 100.0 4.3E-45 1.5E-49 416.3 27.5 440 105-592 26-512 (549)
16 4eco_A Uncharacterized protein 100.0 3.9E-45 1.3E-49 422.7 26.4 393 129-590 81-579 (636)
17 2z63_A TOLL-like receptor 4, v 100.0 6.7E-44 2.3E-48 408.3 34.0 447 109-591 11-508 (570)
18 4ecn_A Leucine-rich repeat pro 100.0 2.3E-44 7.8E-49 423.5 25.8 419 129-591 323-841 (876)
19 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.5E-42 1.9E-46 391.6 27.4 436 107-592 33-512 (562)
20 2z81_A CD282 antigen, TOLL-lik 100.0 8.1E-42 2.8E-46 389.3 23.6 427 104-570 49-514 (549)
21 2z7x_B TOLL-like receptor 1, v 100.0 5.3E-42 1.8E-46 388.1 19.8 420 105-570 21-485 (520)
22 4g8a_A TOLL-like receptor 4; l 100.0 2.2E-39 7.6E-44 375.3 37.2 453 104-591 51-581 (635)
23 3v47_A TOLL-like receptor 5B a 100.0 8.6E-40 2.9E-44 363.6 29.2 375 110-494 15-411 (455)
24 3v47_A TOLL-like receptor 5B a 100.0 3E-39 1E-43 359.1 29.3 382 131-591 12-409 (455)
25 4g8a_A TOLL-like receptor 4; l 100.0 3.7E-38 1.2E-42 365.1 34.1 429 104-568 75-582 (635)
26 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.2E-39 2.8E-43 365.3 23.9 420 104-570 51-514 (562)
27 1jl5_A Outer protein YOPM; leu 100.0 7.3E-38 2.5E-42 346.5 27.8 402 105-591 11-430 (454)
28 1jl5_A Outer protein YOPM; leu 100.0 6.5E-38 2.2E-42 346.9 26.9 377 124-591 6-410 (454)
29 3bz5_A Internalin-J, INLJ; leu 100.0 1.8E-36 6.1E-41 335.6 28.2 308 124-491 37-352 (457)
30 1o6v_A Internalin A; bacterial 100.0 1.7E-35 5.8E-40 329.8 33.0 301 128-492 45-345 (466)
31 1o6v_A Internalin A; bacterial 100.0 6.4E-35 2.2E-39 325.2 31.9 345 104-528 45-389 (466)
32 3bz5_A Internalin-J, INLJ; leu 100.0 3.1E-35 1.1E-39 325.7 29.1 347 104-535 41-395 (457)
33 2id5_A Lingo-1, leucine rich r 100.0 1.3E-34 4.4E-39 323.9 29.2 322 131-492 13-334 (477)
34 2id5_A Lingo-1, leucine rich r 100.0 1.1E-34 3.8E-39 324.4 27.7 323 109-471 15-337 (477)
35 3o6n_A APL1; leucine-rich repe 100.0 2E-33 7E-38 305.7 25.8 312 126-528 42-353 (390)
36 4fmz_A Internalin; leucine ric 100.0 1.3E-32 4.4E-37 294.4 29.1 307 125-491 40-346 (347)
37 3o6n_A APL1; leucine-rich repe 100.0 1.2E-32 4E-37 299.7 27.0 315 151-571 43-357 (390)
38 3oja_B Anopheles plasmodium-re 100.0 5.9E-33 2E-37 318.8 25.4 289 127-491 49-337 (597)
39 3oja_B Anopheles plasmodium-re 100.0 3E-32 1E-36 312.9 26.9 314 151-570 49-362 (597)
40 4fmz_A Internalin; leucine ric 100.0 1.2E-31 4.1E-36 286.8 29.6 308 148-527 39-346 (347)
41 2ft3_A Biglycan; proteoglycan, 100.0 6E-31 2E-35 279.7 25.0 289 129-489 33-331 (332)
42 2ft3_A Biglycan; proteoglycan, 100.0 1E-30 3.5E-35 277.9 26.2 291 106-440 34-330 (332)
43 1xku_A Decorin; proteoglycan, 100.0 4.4E-30 1.5E-34 272.7 28.4 289 130-489 32-330 (330)
44 1xku_A Decorin; proteoglycan, 100.0 2.8E-30 9.4E-35 274.3 26.6 290 154-525 32-330 (330)
45 1ogq_A PGIP-2, polygalacturona 100.0 6.8E-32 2.3E-36 284.2 13.6 248 106-417 51-302 (313)
46 1ogq_A PGIP-2, polygalacturona 100.0 2E-31 6.9E-36 280.7 15.4 252 129-444 50-306 (313)
47 1z7x_W Ribonuclease inhibitor; 100.0 1.3E-33 4.4E-38 314.3 -9.3 388 105-528 3-441 (461)
48 1z7x_W Ribonuclease inhibitor; 100.0 2.7E-33 9.3E-38 311.6 -8.6 369 129-568 3-413 (461)
49 2z80_A TOLL-like receptor 2, v 100.0 1.7E-28 5.9E-33 263.0 17.5 284 128-493 30-316 (353)
50 2z66_A Variable lymphocyte rec 99.9 2.1E-27 7.3E-32 249.2 16.0 264 154-477 29-297 (306)
51 2z66_A Variable lymphocyte rec 99.9 3.2E-27 1.1E-31 247.8 17.2 280 156-499 10-295 (306)
52 4fcg_A Uncharacterized protein 99.9 9.7E-27 3.3E-31 246.4 20.4 224 129-391 81-313 (328)
53 2z80_A TOLL-like receptor 2, v 99.9 4E-27 1.4E-31 252.4 16.7 276 109-423 35-318 (353)
54 3zyi_A Leucine-rich repeat-con 99.9 4.8E-26 1.6E-30 252.4 24.5 246 109-419 58-303 (452)
55 4fcg_A Uncharacterized protein 99.9 2.4E-26 8.3E-31 243.3 21.1 228 151-443 79-314 (328)
56 3zyj_A Leucine-rich repeat-con 99.9 6E-26 2E-30 250.7 24.4 246 109-419 47-292 (440)
57 3ogk_B Coronatine-insensitive 99.9 1.4E-29 4.9E-34 290.8 -6.8 409 122-591 66-527 (592)
58 3g06_A SSPH2 (leucine-rich rep 99.9 3.9E-25 1.3E-29 252.0 29.3 114 106-238 41-154 (622)
59 3g06_A SSPH2 (leucine-rich rep 99.9 4.4E-25 1.5E-29 251.6 29.7 263 129-496 40-302 (622)
60 3zyj_A Leucine-rich repeat-con 99.9 1.4E-25 4.9E-30 247.7 25.0 250 130-444 44-293 (440)
61 3zyi_A Leucine-rich repeat-con 99.9 1.2E-25 4.2E-30 249.1 23.7 250 130-444 55-304 (452)
62 1ozn_A Reticulon 4 receptor; N 99.9 5.1E-26 1.7E-30 236.1 18.7 255 108-427 14-269 (285)
63 1wwl_A Monocyte differentiatio 99.9 1.5E-27 5E-32 251.1 6.5 257 197-492 39-310 (312)
64 3ogk_B Coronatine-insensitive 99.9 1E-28 3.5E-33 283.6 -5.2 402 103-568 71-528 (592)
65 1ozn_A Reticulon 4 receptor; N 99.9 6.8E-26 2.3E-30 235.2 16.0 209 104-346 31-240 (285)
66 1wwl_A Monocyte differentiatio 99.9 1.9E-27 6.6E-32 250.2 3.8 59 405-468 252-310 (312)
67 3o53_A Protein LRIM1, AGAP0063 99.9 2.7E-27 9.3E-32 249.6 3.4 263 155-492 12-277 (317)
68 4gt4_A Tyrosine-protein kinase 99.9 1.1E-26 3.6E-31 242.1 6.6 105 625-729 170-298 (308)
69 3omv_A RAF proto-oncogene seri 99.9 2.9E-26 9.9E-31 237.9 9.6 105 625-729 157-292 (307)
70 4aoj_A High affinity nerve gro 99.9 3.2E-26 1.1E-30 240.8 8.0 105 625-729 183-311 (329)
71 4asz_A BDNF/NT-3 growth factor 99.9 2.9E-26 1E-30 237.8 5.9 104 625-728 153-280 (299)
72 3o53_A Protein LRIM1, AGAP0063 99.9 1.3E-26 4.5E-31 244.4 2.5 268 108-449 13-282 (317)
73 4fih_A Serine/threonine-protei 99.9 2.3E-25 7.7E-30 234.1 10.8 104 625-729 195-322 (346)
74 3oja_A Leucine-rich immune mol 99.9 1.5E-25 5.3E-30 250.1 9.3 149 331-486 120-270 (487)
75 3hmm_A TGF-beta receptor type- 99.9 8.3E-26 2.8E-30 235.8 5.0 105 625-729 133-289 (303)
76 4b9d_A Serine/threonine-protei 99.9 1.2E-25 4.1E-30 236.6 5.6 136 593-729 24-275 (350)
77 4aw0_A HPDK1, 3-phosphoinositi 99.9 6E-25 2E-29 227.5 9.2 136 593-728 32-282 (311)
78 4ase_A Vascular endothelial gr 99.9 2.7E-25 9.4E-30 235.6 6.4 105 625-729 210-339 (353)
79 3oja_A Leucine-rich immune mol 99.9 2.2E-24 7.5E-29 240.7 13.8 168 310-492 37-205 (487)
80 3fpq_A Serine/threonine-protei 99.9 1.2E-24 4.1E-29 224.1 10.5 101 625-729 156-281 (290)
81 4g3f_A NF-kappa-beta-inducing 99.9 6.1E-25 2.1E-29 230.2 8.2 136 593-728 58-307 (336)
82 2z62_A TOLL-like receptor 4, v 99.9 3.2E-23 1.1E-27 213.9 20.7 162 112-277 14-176 (276)
83 3hyh_A Carbon catabolite-derep 99.9 8.8E-25 3E-29 223.1 8.5 103 625-729 137-261 (275)
84 4fie_A Serine/threonine-protei 99.9 1.5E-24 5.2E-29 233.6 10.6 136 593-729 151-399 (423)
85 2z62_A TOLL-like receptor 4, v 99.9 4.1E-23 1.4E-27 213.0 19.7 208 356-591 29-238 (276)
86 2p1m_B Transport inhibitor res 99.9 5.4E-27 1.8E-31 269.4 -10.6 158 124-284 61-245 (594)
87 3ubd_A Ribosomal protein S6 ki 99.9 2.5E-24 8.6E-29 222.8 7.5 100 625-725 151-271 (304)
88 2o6q_A Variable lymphocyte rec 99.9 1E-21 3.5E-26 201.9 23.3 174 107-284 18-191 (270)
89 4g31_A Eukaryotic translation 99.9 8.7E-24 3E-28 219.5 6.5 102 625-729 143-278 (299)
90 2o6q_A Variable lymphocyte rec 99.9 2.1E-21 7.1E-26 199.6 23.2 131 130-264 17-147 (270)
91 3rfs_A Internalin B, repeat mo 99.9 4.6E-22 1.6E-26 204.7 16.9 211 125-380 37-247 (272)
92 3rfs_A Internalin B, repeat mo 99.9 1.1E-21 3.9E-26 201.8 18.9 209 329-578 39-247 (272)
93 2p1m_B Transport inhibitor res 99.9 3.4E-25 1.2E-29 254.4 -8.9 411 104-580 65-534 (594)
94 1p9a_G Platelet glycoprotein I 99.9 2.5E-21 8.5E-26 201.0 20.8 202 126-368 7-208 (290)
95 3goz_A Leucine-rich repeat-con 99.9 9.9E-24 3.4E-28 226.7 1.8 130 133-263 2-151 (362)
96 1p9a_G Platelet glycoprotein I 99.9 3.7E-21 1.3E-25 199.7 21.0 156 327-491 6-161 (290)
97 3goz_A Leucine-rich repeat-con 99.9 2.3E-23 7.9E-28 223.8 2.6 263 312-592 3-299 (362)
98 4b99_A Mitogen-activated prote 99.9 2.7E-22 9.2E-27 216.4 10.5 105 625-729 183-343 (398)
99 4glp_A Monocyte differentiatio 99.9 1.4E-21 5E-26 205.1 15.2 144 128-272 90-246 (310)
100 3m19_A Variable lymphocyte rec 99.9 7.8E-21 2.7E-25 193.0 19.7 179 107-289 16-194 (251)
101 4glp_A Monocyte differentiatio 99.9 1.7E-21 5.9E-26 204.5 14.7 207 355-591 91-308 (310)
102 2ast_B S-phase kinase-associat 99.9 9.3E-23 3.2E-27 216.6 3.1 204 153-389 70-282 (336)
103 2xwt_C Thyrotropin receptor; s 99.8 6.6E-21 2.2E-25 192.1 15.3 130 130-262 32-168 (239)
104 2ca6_A RAN GTPase-activating p 99.8 6.5E-23 2.2E-27 222.4 0.4 193 327-530 90-319 (386)
105 3v5w_A G-protein coupled recep 99.8 8.5E-22 2.9E-26 221.8 9.1 130 593-725 189-439 (689)
106 4f9c_A Cell division cycle 7-r 99.8 1E-21 3.5E-26 209.6 8.5 78 625-702 142-248 (361)
107 2ca6_A RAN GTPase-activating p 99.8 5.3E-23 1.8E-27 223.0 -1.6 115 354-471 186-320 (386)
108 2ast_B S-phase kinase-associat 99.8 1.4E-22 4.9E-27 215.2 0.8 125 155-284 49-178 (336)
109 2xwt_C Thyrotropin receptor; s 99.8 1.3E-20 4.4E-25 190.0 14.3 180 104-287 30-218 (239)
110 3m19_A Variable lymphocyte rec 99.8 9.1E-20 3.1E-24 185.1 20.5 159 331-492 35-193 (251)
111 1h6u_A Internalin H; cell adhe 99.8 4.5E-20 1.5E-24 193.3 16.8 160 112-286 26-185 (308)
112 1h6u_A Internalin H; cell adhe 99.8 1.8E-20 6.2E-25 196.4 13.5 140 134-286 24-163 (308)
113 2o6s_A Variable lymphocyte rec 99.8 1.3E-19 4.6E-24 178.3 17.7 180 109-299 11-190 (208)
114 3fxz_A Serine/threonine-protei 99.8 1.1E-20 3.7E-25 197.1 10.1 136 593-729 20-268 (297)
115 3p1a_A MYT1 kinase, membrane-a 99.8 6.8E-21 2.3E-25 200.1 7.7 134 593-729 57-303 (311)
116 3zgw_A Maternal embryonic leuc 99.8 8.8E-21 3E-25 201.8 8.5 137 593-729 10-259 (347)
117 3uim_A Brassinosteroid insensi 99.8 9.2E-21 3.2E-25 200.3 8.4 137 593-729 30-303 (326)
118 3uto_A Twitchin; kinase, muscl 99.8 1E-20 3.5E-25 214.1 8.7 102 625-728 280-408 (573)
119 3fe3_A MAP/microtubule affinit 99.8 1.8E-20 6.1E-25 198.1 10.0 135 593-729 15-263 (328)
120 2qkw_B Protein kinase; three-h 99.8 1.9E-20 6.5E-25 197.5 9.5 138 592-729 38-307 (321)
121 4ay9_X Follicle-stimulating ho 99.8 4.6E-19 1.6E-23 189.3 19.6 108 156-267 12-121 (350)
122 2c30_A Serine/threonine-protei 99.8 2.9E-20 9.8E-25 196.1 9.4 104 625-729 166-293 (321)
123 2o6s_A Variable lymphocyte rec 99.8 3E-19 1E-23 175.8 15.9 177 334-535 10-186 (208)
124 4ay9_X Follicle-stimulating ho 99.8 6.2E-19 2.1E-23 188.2 19.6 124 132-259 12-137 (350)
125 3h4j_B AMPK kdaid, SNF1-like p 99.8 3.4E-20 1.2E-24 196.4 9.6 103 625-729 133-257 (336)
126 3niz_A Rhodanese family protei 99.8 4.8E-20 1.6E-24 193.5 9.7 136 593-729 21-299 (311)
127 3dbq_A Dual specificity protei 99.8 3.4E-20 1.2E-24 197.6 8.4 136 593-729 9-272 (343)
128 3s95_A LIMK-1, LIM domain kina 99.8 4.2E-20 1.4E-24 193.8 9.0 137 593-729 10-274 (310)
129 1qcf_A Haematopoetic cell kina 99.8 1.8E-20 6E-25 207.5 5.8 137 593-729 188-436 (454)
130 1xjd_A Protein kinase C, theta 99.8 7.1E-20 2.4E-24 194.7 10.3 135 593-728 17-267 (345)
131 1o6l_A RAC-beta serine/threoni 99.8 1.2E-19 4E-24 192.5 11.8 103 625-728 130-258 (337)
132 3oz6_A Mitogen-activated prote 99.8 7.8E-20 2.7E-24 198.2 10.0 78 625-702 134-232 (388)
133 3p86_A Serine/threonine-protei 99.8 4.6E-20 1.6E-24 193.4 8.0 104 625-729 164-290 (309)
134 3cvr_A Invasion plasmid antige 99.8 5.9E-19 2E-23 198.7 17.4 196 332-578 60-255 (571)
135 3soc_A Activin receptor type-2 99.8 2.7E-20 9.2E-25 196.5 5.5 105 625-729 156-310 (322)
136 3op5_A Serine/threonine-protei 99.8 6.9E-20 2.4E-24 196.8 8.8 104 625-728 177-320 (364)
137 2zmd_A Dual specificity protei 99.8 7.8E-20 2.7E-24 198.1 8.8 136 593-729 56-319 (390)
138 3txo_A PKC-L, NPKC-ETA, protei 99.8 4.9E-20 1.7E-24 196.7 6.8 132 593-725 23-269 (353)
139 4dc2_A Protein kinase C IOTA t 99.8 1.4E-19 4.8E-24 195.7 10.4 100 625-725 178-307 (396)
140 1csn_A Casein kinase-1; phosph 99.8 1E-19 3.5E-24 189.6 9.0 137 593-729 10-275 (298)
141 3sxs_A Cytoplasmic tyrosine-pr 99.8 4E-20 1.4E-24 189.6 5.7 137 593-729 8-256 (268)
142 4hgt_A Casein kinase I isoform 99.8 8.3E-20 2.8E-24 190.0 8.2 137 593-729 9-272 (296)
143 2eue_A Carbon catabolite derep 99.8 1.3E-19 4.6E-24 186.5 9.6 103 625-729 137-261 (275)
144 3q4u_A Activin receptor type-1 99.8 4.1E-20 1.4E-24 192.8 5.8 105 625-729 138-294 (301)
145 4hcu_A Tyrosine-protein kinase 99.8 3.2E-20 1.1E-24 190.5 4.7 137 593-729 10-258 (269)
146 3kex_A Receptor tyrosine-prote 99.8 1.2E-19 4.2E-24 191.7 9.2 105 625-729 140-268 (325)
147 3o0g_A Cell division protein k 99.8 1.3E-19 4.5E-24 188.3 9.2 104 625-729 126-281 (292)
148 1u5q_A Serine/threonine protei 99.8 1.3E-19 4.4E-24 193.2 9.3 100 625-729 179-304 (348)
149 4aw2_A Serine/threonine-protei 99.8 9.4E-20 3.2E-24 199.6 8.3 136 593-728 74-336 (437)
150 4fr4_A YANK1, serine/threonine 99.8 2.3E-19 7.9E-24 193.2 11.1 102 625-728 140-269 (384)
151 1ob3_A PFPK5, cell division co 99.8 8.5E-20 2.9E-24 189.4 7.5 104 625-729 125-279 (288)
152 3poz_A Epidermal growth factor 99.8 3.9E-20 1.3E-24 195.7 4.9 105 625-729 142-270 (327)
153 2v9t_B SLIT homolog 2 protein 99.8 1.8E-18 6.3E-23 171.7 16.6 152 109-264 15-166 (220)
154 3llt_A Serine/threonine kinase 99.8 2E-19 6.8E-24 192.9 10.1 106 593-702 35-260 (360)
155 3kul_A Ephrin type-A receptor 99.8 7.9E-20 2.7E-24 193.1 6.7 105 625-729 176-305 (325)
156 3tki_A Serine/threonine-protei 99.8 9.4E-20 3.2E-24 192.3 7.2 137 593-729 7-260 (323)
157 2qol_A Ephrin receptor; recept 99.8 6.8E-20 2.3E-24 197.4 6.2 105 625-729 172-301 (373)
158 2psq_A Fibroblast growth facto 99.8 1.5E-19 5.3E-24 194.4 8.9 105 625-729 228-356 (370)
159 3gen_A Tyrosine-protein kinase 99.8 7.3E-20 2.5E-24 189.2 6.1 137 593-729 24-272 (283)
160 2r5t_A Serine/threonine-protei 99.8 3.4E-19 1.2E-23 191.4 11.5 101 625-726 164-285 (373)
161 3v8s_A RHO-associated protein 99.8 1.2E-19 4.2E-24 197.2 8.0 136 593-728 69-327 (410)
162 3mtl_A Cell division protein k 99.8 1.6E-19 5.6E-24 190.6 8.8 104 625-729 125-280 (324)
163 2zv2_A Calcium/calmodulin-depe 99.8 3.9E-19 1.3E-23 185.3 11.5 104 625-729 162-291 (298)
164 3g33_A Cell division protein k 99.8 1.8E-19 6.1E-24 188.8 8.9 103 625-729 145-295 (308)
165 4eqm_A Protein kinase; transfe 99.8 1.5E-19 5.2E-24 188.1 8.3 104 625-728 136-266 (294)
166 3kn6_A Ribosomal protein S6 ki 99.8 2.4E-19 8.2E-24 189.4 9.9 104 625-729 131-269 (325)
167 3uzp_A CKI-delta, CKID, casein 99.8 1.4E-19 4.7E-24 188.3 7.7 137 593-729 9-272 (296)
168 3cvr_A Invasion plasmid antige 99.8 1.6E-18 5.4E-23 195.2 16.9 133 130-286 60-192 (571)
169 3cbl_A C-FES, proto-oncogene t 99.8 4.7E-20 1.6E-24 199.1 4.3 137 593-729 114-366 (377)
170 1fmk_A C-SRC, P60-SRC, tyrosin 99.8 8.3E-20 2.8E-24 201.9 6.4 137 593-729 184-432 (452)
171 3lb7_A RAF proto-oncogene seri 99.8 1.7E-19 5.8E-24 189.0 8.4 105 625-729 157-292 (307)
172 3kvw_A DYRK2, dual specificity 99.8 1.7E-19 5.7E-24 198.0 8.7 74 625-702 225-300 (429)
173 2y0a_A Death-associated protei 99.8 2.2E-19 7.6E-24 189.7 9.4 103 625-729 139-270 (326)
174 3dls_A PAS domain-containing s 99.8 1.8E-19 6.3E-24 191.1 8.6 103 625-729 155-273 (335)
175 2pmi_A Negative RE, cyclin-dep 99.8 3.7E-19 1.3E-23 187.3 10.8 104 625-729 133-292 (317)
176 3ttj_A Mitogen-activated prote 99.8 2.1E-19 7.1E-24 199.1 9.2 77 625-703 189-265 (464)
177 2izr_A Casein kinase I isoform 99.8 2.7E-19 9.1E-24 189.5 9.5 136 593-728 9-272 (330)
178 1tki_A Titin; serine kinase, m 99.8 1.8E-19 6.2E-24 189.9 8.1 103 625-729 127-256 (321)
179 2w4o_A Calcium/calmodulin-depe 99.8 2.1E-19 7.1E-24 191.8 8.5 135 593-729 53-304 (349)
180 2yab_A Death-associated protei 99.8 2.8E-19 9.4E-24 191.4 9.4 103 625-729 140-271 (361)
181 3dzo_A Rhoptry kinase domain; 99.8 1.1E-19 3.7E-24 198.6 6.3 100 625-729 236-362 (413)
182 3soa_A Calcium/calmodulin-depe 99.8 2.6E-19 9E-24 196.7 9.3 104 625-729 135-266 (444)
183 2i0e_A Protein kinase C-beta I 99.8 2.2E-19 7.5E-24 191.6 8.3 100 625-725 146-266 (353)
184 3fme_A Dual specificity mitoge 99.8 2.2E-19 7.4E-24 186.3 7.8 103 625-729 135-265 (290)
185 2vd5_A DMPK protein; serine/th 99.8 2.5E-19 8.6E-24 194.8 8.6 135 593-728 61-325 (412)
186 3kk8_A Calcium/calmodulin depe 99.8 4.4E-19 1.5E-23 183.4 10.1 135 593-729 6-260 (284)
187 3pfq_A PKC-B, PKC-beta, protei 99.8 4.9E-19 1.7E-23 204.8 11.4 132 593-725 341-587 (674)
188 4ejn_A RAC-alpha serine/threon 99.8 2.5E-19 8.7E-24 197.9 8.6 103 625-728 274-402 (446)
189 4aaa_A Cyclin-dependent kinase 99.8 4.2E-19 1.4E-23 188.0 10.0 136 593-729 25-305 (331)
190 1fot_A TPK1 delta, CAMP-depend 99.8 5.4E-19 1.8E-23 185.9 10.7 100 625-728 131-256 (318)
191 2bdw_A Hypothetical protein K1 99.8 3.3E-19 1.1E-23 191.1 9.1 103 625-729 153-283 (362)
192 2xot_A Amphoterin-induced prot 99.8 1.7E-18 5.8E-23 185.6 14.5 175 109-287 22-202 (361)
193 3sv0_A Casein kinase I-like; t 99.8 3.9E-19 1.3E-23 197.1 9.7 136 593-728 7-269 (483)
194 2v70_A SLIT-2, SLIT homolog 2 99.8 3.6E-18 1.2E-22 169.5 15.6 153 109-265 15-168 (220)
195 1vzo_A Ribosomal protein S6 ki 99.8 2E-19 6.8E-24 192.5 7.0 104 625-728 184-319 (355)
196 3rp9_A Mitogen-activated prote 99.8 5.6E-19 1.9E-23 195.9 10.8 105 593-697 53-280 (458)
197 1opk_A P150, C-ABL, proto-onco 99.8 1.2E-19 4E-24 203.0 5.3 105 625-729 343-470 (495)
198 3fdn_A Serine/threonine-protei 99.8 3.3E-19 1.1E-23 183.9 8.3 102 625-729 134-256 (279)
199 4agu_A Cyclin-dependent kinase 99.8 3.7E-19 1.3E-23 186.6 8.8 104 625-729 127-283 (311)
200 3e3p_A Protein kinase, putativ 99.8 5.8E-19 2E-23 189.2 10.2 103 625-729 156-313 (360)
201 3a8x_A Protein kinase C IOTA t 99.8 5.7E-19 2E-23 187.9 10.0 100 625-725 135-264 (345)
202 3cok_A Serine/threonine-protei 99.8 4.5E-19 1.5E-23 182.8 8.8 104 625-729 137-261 (278)
203 1qpc_A LCK kinase; alpha beta 99.8 1.8E-19 6.2E-24 185.8 5.8 136 593-728 13-260 (279)
204 1rdq_E PKA C-alpha, CAMP-depen 99.8 6.8E-19 2.3E-23 187.7 10.3 132 593-728 41-291 (350)
205 4f0f_A Serine/threonine-protei 99.8 9.1E-19 3.1E-23 181.4 10.9 101 625-729 149-281 (287)
206 1nxk_A MAP kinase-activated pr 99.8 4.2E-19 1.4E-23 193.0 8.8 103 625-729 186-320 (400)
207 3c0i_A Peripheral plasma membr 99.8 4.9E-19 1.7E-23 189.1 9.1 104 625-729 155-285 (351)
208 2x4f_A Myosin light chain kina 99.8 5.2E-19 1.8E-23 190.4 9.4 103 625-729 212-341 (373)
209 2y94_A 5'-AMP-activated protei 99.8 5.9E-19 2E-23 195.3 10.1 103 625-729 141-265 (476)
210 2vx3_A Dual specificity tyrosi 99.8 5.5E-19 1.9E-23 191.1 9.6 74 625-702 184-259 (382)
211 2v62_A Serine/threonine-protei 99.8 2.9E-19 9.8E-24 190.5 7.2 105 625-729 176-320 (345)
212 3ugc_A Tyrosine-protein kinase 99.8 1.8E-19 6.3E-24 187.5 5.5 105 625-729 139-283 (295)
213 3l9p_A Anaplastic lymphoma kin 99.8 2E-19 6.8E-24 193.4 5.9 105 625-729 206-337 (367)
214 1mp8_A Focal adhesion kinase 1 99.8 2.2E-19 7.5E-24 185.5 6.0 105 625-729 141-268 (281)
215 3a7i_A MST3 kinase, serine/thr 99.8 7.5E-19 2.6E-23 183.6 10.1 104 625-729 144-269 (303)
216 3ork_A Serine/threonine protei 99.8 3.3E-19 1.1E-23 187.1 7.4 104 625-728 141-271 (311)
217 3lzb_A Epidermal growth factor 99.8 2.3E-19 7.8E-24 189.8 6.1 105 625-729 142-270 (327)
218 3e6j_A Variable lymphocyte rec 99.8 9E-18 3.1E-22 167.8 17.4 152 109-265 23-174 (229)
219 3mi9_A Cell division protein k 99.8 8.5E-19 2.9E-23 187.3 10.5 105 625-729 149-310 (351)
220 3lm5_A Serine/threonine-protei 99.8 4.5E-19 1.5E-23 187.5 8.2 103 625-729 156-286 (327)
221 3c4z_A Rhodopsin kinase; Ser/T 99.8 7.3E-19 2.5E-23 196.9 10.2 101 625-726 314-439 (543)
222 2rku_A Serine/threonine-protei 99.8 8.7E-19 3E-23 182.2 10.1 104 625-729 140-264 (294)
223 1kob_A Twitchin; kinase, intra 99.8 5.8E-19 2E-23 190.7 8.8 103 625-729 174-303 (387)
224 3g2f_A Bone morphogenetic prot 99.8 1.8E-19 6E-24 191.3 4.6 105 625-729 145-310 (336)
225 3n9x_A Phosphotransferase; mal 99.8 5.8E-19 2E-23 194.0 8.9 76 625-700 154-251 (432)
226 3a62_A Ribosomal protein S6 ki 99.8 5.5E-19 1.9E-23 186.8 8.4 100 625-725 146-266 (327)
227 3an0_A Dual specificity mitoge 99.8 3.3E-19 1.1E-23 189.5 6.7 103 625-729 179-309 (340)
228 3is5_A Calcium-dependent prote 99.8 6.3E-19 2.1E-23 182.5 8.5 102 625-729 149-277 (285)
229 3cc6_A Protein tyrosine kinase 99.8 3.4E-19 1.2E-23 184.1 6.4 105 625-729 138-265 (281)
230 3tt0_A Basic fibroblast growth 99.8 5.6E-19 1.9E-23 191.0 8.1 105 625-729 216-344 (382)
231 3t9t_A Tyrosine-protein kinase 99.8 1.8E-19 6.2E-24 184.4 4.1 137 593-729 8-256 (267)
232 2nru_A Interleukin-1 receptor- 99.8 8.2E-19 2.8E-23 183.6 9.1 104 625-729 158-298 (307)
233 4e7w_A Glycogen synthase kinas 99.8 5.4E-19 1.8E-23 191.8 8.0 103 625-729 166-320 (394)
234 3nsz_A CK II alpha, casein kin 99.8 8.5E-19 2.9E-23 185.5 9.3 135 593-729 36-318 (330)
235 3com_A Serine/threonine-protei 99.8 1.8E-18 6E-23 181.7 11.4 136 593-729 29-277 (314)
236 3e7e_A HBUB1, BUB1A, mitotic c 99.8 5.5E-19 1.9E-23 189.8 7.7 103 625-727 197-329 (365)
237 2a2a_A Death-associated protei 99.8 1E-18 3.4E-23 184.3 9.5 103 625-729 140-271 (321)
238 4euu_A Serine/threonine-protei 99.8 6.7E-19 2.3E-23 185.4 8.1 103 625-729 137-301 (319)
239 1cm8_A Phosphorylated MAP kina 99.8 1.4E-18 4.9E-23 186.6 10.8 101 625-729 153-306 (367)
240 2owb_A Serine/threonine-protei 99.8 1.1E-18 3.6E-23 185.3 9.6 104 625-729 166-290 (335)
241 1k9a_A Carboxyl-terminal SRC k 99.8 5.1E-19 1.7E-23 195.5 7.5 101 625-729 314-437 (450)
242 3aln_A Dual specificity mitoge 99.8 8.7E-19 3E-23 185.2 8.9 103 625-729 151-284 (327)
243 1j1b_A Glycogen synthase kinas 99.8 7.9E-19 2.7E-23 192.1 8.9 103 625-729 181-335 (420)
244 3og7_A AKAP9-BRAF fusion prote 99.8 5.7E-19 1.9E-23 183.2 7.3 105 625-729 145-280 (289)
245 3byv_A Rhoptry kinase; malaria 99.8 2.7E-19 9.1E-24 193.2 4.8 100 625-729 231-358 (377)
246 2h34_A Serine/threonine-protei 99.8 8.5E-19 2.9E-23 183.8 8.5 104 625-728 159-287 (309)
247 2y7j_A Phosphorylase B kinase 99.8 1E-18 3.5E-23 187.6 9.2 103 625-729 225-358 (365)
248 3kfa_A Tyrosine-protein kinase 99.8 4.9E-19 1.7E-23 183.4 6.4 137 593-729 13-263 (288)
249 3qup_A Tyrosine-protein kinase 99.8 4.8E-19 1.6E-23 186.9 6.4 104 625-728 162-289 (323)
250 3uc3_A Serine/threonine-protei 99.8 7.4E-19 2.5E-23 188.4 7.9 135 593-729 20-273 (361)
251 2eva_A TAK1 kinase - TAB1 chim 99.7 9.3E-19 3.2E-23 183.3 8.4 101 625-729 130-255 (307)
252 3cek_A Dual specificity protei 99.7 1.1E-18 3.7E-23 183.3 8.9 136 593-729 28-291 (313)
253 2h8h_A Proto-oncogene tyrosine 99.7 2.5E-19 8.7E-24 202.1 4.3 137 593-729 267-515 (535)
254 2yex_A Serine/threonine-protei 99.7 1.2E-18 4.1E-23 179.2 8.9 105 625-729 130-260 (276)
255 3dtc_A Mitogen-activated prote 99.7 5.3E-19 1.8E-23 181.5 6.2 102 625-729 133-265 (271)
256 3rgf_A Cyclin-dependent kinase 99.7 1.2E-18 4.2E-23 189.9 9.3 78 625-702 153-237 (405)
257 2v9t_B SLIT homolog 2 protein 99.7 1.4E-17 4.8E-22 165.3 16.1 154 131-288 13-166 (220)
258 2wqm_A Serine/threonine-protei 99.7 1E-18 3.4E-23 183.3 8.2 104 625-729 161-289 (310)
259 3a99_A Proto-oncogene serine/t 99.7 6.7E-19 2.3E-23 185.6 6.8 102 625-729 174-292 (320)
260 3i6u_A CDS1, serine/threonine- 99.7 1.2E-18 4.1E-23 190.6 9.0 103 625-729 264-398 (419)
261 3ll6_A Cyclin G-associated kin 99.7 1.2E-18 4E-23 184.8 8.5 105 625-729 163-300 (337)
262 3qyz_A Mitogen-activated prote 99.7 1.2E-18 4E-23 187.3 8.5 105 625-729 153-312 (364)
263 3c1x_A Hepatocyte growth facto 99.7 5.6E-19 1.9E-23 190.0 6.0 105 625-729 217-347 (373)
264 3pls_A Macrophage-stimulating 99.7 1.1E-18 3.8E-23 181.6 8.0 105 625-729 149-279 (298)
265 4exu_A Mitogen-activated prote 99.7 1.5E-18 5.1E-23 186.9 9.2 101 625-729 169-322 (371)
266 2acx_A G protein-coupled recep 99.7 8.5E-19 2.9E-23 196.9 7.4 134 593-728 184-442 (576)
267 2dyl_A Dual specificity mitoge 99.7 2E-18 6.8E-23 181.5 9.8 103 625-729 150-282 (318)
268 3mdy_A Bone morphogenetic prot 99.7 8.4E-19 2.9E-23 186.0 6.9 105 625-729 167-323 (337)
269 2fst_X Mitogen-activated prote 99.7 1.3E-18 4.5E-23 186.8 8.4 101 625-729 157-310 (367)
270 1z57_A Dual specificity protei 99.7 2E-18 6.8E-23 183.1 9.7 74 625-702 143-235 (339)
271 1ua2_A CAK, cell division prot 99.7 1.5E-18 5E-23 185.1 8.6 104 625-729 137-290 (346)
272 3f3z_A Calcium/calmodulin-depe 99.7 2E-18 6.8E-23 177.8 9.4 102 625-729 131-260 (277)
273 2vgo_A Serine/threonine-protei 99.7 1.8E-18 6.1E-23 178.9 9.0 102 625-729 139-261 (284)
274 2v70_A SLIT-2, SLIT homolog 2 99.7 1.9E-17 6.4E-22 164.4 16.0 155 131-289 13-168 (220)
275 2xrw_A Mitogen-activated prote 99.7 1.2E-18 4.1E-23 187.6 8.0 76 625-702 152-227 (371)
276 3gbz_A Kinase, CMGC CDK; ssgci 99.7 8.9E-19 3E-23 185.4 6.8 136 593-729 34-317 (329)
277 2eu9_A Dual specificity protei 99.7 1.9E-18 6.5E-23 184.5 9.4 75 625-703 148-241 (355)
278 2ozo_A Tyrosine-protein kinase 99.7 7.9E-19 2.7E-23 201.1 6.5 105 625-729 461-590 (613)
279 3eqc_A Dual specificity mitoge 99.7 1.1E-18 3.9E-23 187.0 7.2 107 593-702 33-231 (360)
280 2qr7_A Ribosomal protein S6 ki 99.7 6.3E-19 2.2E-23 187.4 5.0 136 593-729 22-276 (342)
281 2jii_A Serine/threonine-protei 99.7 9.3E-19 3.2E-23 187.1 6.3 105 625-729 184-328 (352)
282 1h6t_A Internalin B; cell adhe 99.7 2E-17 6.7E-22 171.7 16.0 170 104-288 45-214 (291)
283 2h6d_A 5'-AMP-activated protei 99.7 2.2E-18 7.6E-23 177.3 8.7 103 625-729 136-260 (276)
284 2rio_A Serine/threonine-protei 99.7 1.7E-18 5.9E-23 190.3 8.3 105 625-729 140-294 (434)
285 3pg1_A Mitogen-activated prote 99.7 1.8E-18 6.1E-23 185.6 8.1 103 625-729 159-315 (362)
286 1blx_A Cyclin-dependent kinase 99.7 2.1E-18 7.3E-23 182.0 8.6 103 625-729 145-295 (326)
287 1mqb_A Ephrin type-A receptor 99.7 1.8E-18 6E-23 183.4 7.9 105 625-729 172-301 (333)
288 1t46_A HOMO sapiens V-KIT hard 99.7 1.3E-18 4.5E-23 182.5 6.8 105 625-729 170-299 (313)
289 2ac3_A MAP kinase-interacting 99.7 2.6E-18 9E-23 180.5 9.1 105 625-729 136-294 (316)
290 2r3i_A Cell division protein k 99.7 2.3E-18 7.7E-23 179.5 8.5 104 625-729 128-282 (299)
291 3mwu_A Calmodulin-domain prote 99.7 3.5E-18 1.2E-22 190.9 10.5 134 593-729 22-275 (486)
292 3e6j_A Variable lymphocyte rec 99.7 4.6E-17 1.6E-21 162.6 17.6 154 131-289 21-174 (229)
293 3bhy_A Death-associated protei 99.7 2.4E-18 8.2E-23 177.7 8.5 103 625-729 133-264 (283)
294 2clq_A Mitogen-activated prote 99.7 1.8E-18 6.1E-23 179.8 7.4 104 625-729 147-277 (295)
295 4e5w_A Tyrosine-protein kinase 99.7 6.1E-19 2.1E-23 184.1 3.8 105 625-729 151-294 (302)
296 3brb_A Proto-oncogene tyrosine 99.7 1.7E-18 5.9E-23 181.7 7.3 105 625-729 172-300 (313)
297 3p23_A Serine/threonine-protei 99.7 2E-18 7E-23 189.3 8.1 105 625-729 143-282 (432)
298 1t4h_A Serine/threonine-protei 99.7 4.7E-18 1.6E-22 176.3 10.3 101 625-729 156-281 (290)
299 3vhe_A Vascular endothelial gr 99.7 1E-18 3.6E-23 187.1 5.5 105 625-729 218-347 (359)
300 1wak_A Serine/threonine-protei 99.7 1.8E-18 6.2E-23 187.8 7.5 61 638-702 234-294 (397)
301 3gxj_A TGF-beta receptor type- 99.7 1.1E-19 3.6E-24 189.8 -2.3 105 625-729 133-289 (303)
302 1rjb_A FL cytokine receptor; k 99.7 1.3E-18 4.3E-23 185.3 6.0 105 625-729 197-326 (344)
303 1u59_A Tyrosine-protein kinase 99.7 1.8E-18 6.3E-23 179.1 7.1 105 625-729 135-264 (287)
304 3qd2_B Eukaryotic translation 99.7 2.1E-18 7.1E-23 182.4 7.6 105 625-729 189-324 (332)
305 2pvf_A Fibroblast growth facto 99.7 1.6E-18 5.6E-23 183.7 6.8 105 625-729 182-310 (334)
306 3gni_B Strad alpha; kinase fol 99.7 3.7E-18 1.3E-22 185.1 9.7 78 625-702 153-238 (389)
307 1byg_A CSK, protein (C-termina 99.7 1.8E-18 6.2E-23 178.2 6.9 101 625-729 142-265 (278)
308 2j7t_A Serine/threonine-protei 99.7 1.7E-18 5.8E-23 180.7 6.7 137 592-729 18-274 (302)
309 1luf_A Muscle-specific tyrosin 99.7 1E-18 3.6E-23 185.8 5.1 105 625-729 199-327 (343)
310 1h6t_A Internalin B; cell adhe 99.7 2.3E-17 7.9E-22 171.1 15.1 161 111-286 30-190 (291)
311 4fl3_A Tyrosine-protein kinase 99.7 1.1E-18 3.6E-23 200.5 5.5 105 625-729 494-623 (635)
312 2jam_A Calcium/calmodulin-depe 99.7 3E-18 1E-22 179.1 8.4 134 593-729 9-260 (304)
313 2b9h_A MAP kinase FUS3, mitoge 99.7 2.5E-18 8.7E-23 183.7 8.1 137 593-729 11-304 (353)
314 2xir_A Vascular endothelial gr 99.7 1.5E-18 5.1E-23 182.3 6.1 105 625-729 173-302 (316)
315 2w5a_A Serine/threonine-protei 99.7 1.3E-18 4.3E-23 179.4 5.4 104 625-729 141-266 (279)
316 3hko_A Calcium/calmodulin-depe 99.7 3.9E-18 1.3E-22 181.6 9.0 105 625-729 193-329 (345)
317 2wtk_C Serine/threonine-protei 99.7 7.1E-18 2.4E-22 176.2 10.8 105 625-729 134-262 (305)
318 2ivs_A Proto-oncogene tyrosine 99.7 1.7E-18 5.9E-23 181.7 6.1 105 625-729 175-303 (314)
319 3f66_A Hepatocyte growth facto 99.7 1.6E-18 5.4E-23 180.6 5.8 105 625-729 153-283 (298)
320 3lxl_A Tyrosine-protein kinase 99.7 6.7E-19 2.3E-23 186.2 2.9 105 625-729 152-295 (327)
321 3eb0_A Putative uncharacterize 99.7 4.5E-18 1.5E-22 184.0 9.4 103 625-729 166-320 (383)
322 2x7f_A TRAF2 and NCK-interacti 99.7 3.2E-18 1.1E-22 180.7 7.9 104 625-729 154-285 (326)
323 3fhr_A MAP kinase-activated pr 99.7 1.6E-18 5.4E-23 184.0 5.5 102 625-729 153-286 (336)
324 4fvq_A Tyrosine-protein kinase 99.7 1.2E-18 4.1E-23 180.6 4.2 100 625-729 138-267 (289)
325 3lxp_A Non-receptor tyrosine-p 99.7 1.1E-18 3.8E-23 183.7 4.0 105 625-729 159-302 (318)
326 3coi_A Mitogen-activated prote 99.7 4.7E-18 1.6E-22 181.7 8.8 101 625-729 151-304 (353)
327 2a19_B Interferon-induced, dou 99.7 3E-18 1E-22 177.0 7.1 103 625-729 147-266 (284)
328 1p4o_A Insulin-like growth fac 99.7 1.7E-18 6E-23 182.4 5.4 105 625-729 163-291 (322)
329 2i1m_A Macrophage colony-stimu 99.7 2E-18 6.8E-23 182.9 5.3 105 625-729 189-318 (333)
330 1xbb_A Tyrosine-protein kinase 99.7 2.2E-18 7.5E-23 179.0 5.5 105 625-729 142-271 (291)
331 1u46_A ACK-1, activated CDC42 99.7 2.3E-18 8E-23 178.6 5.6 105 625-729 146-276 (291)
332 3lij_A Calcium/calmodulin depe 99.7 6.2E-18 2.1E-22 189.2 9.5 102 625-729 161-290 (494)
333 2xot_A Amphoterin-induced prot 99.7 2.1E-17 7.2E-22 177.1 13.1 159 105-264 39-203 (361)
334 4ezg_A Putative uncharacterize 99.7 2.5E-17 8.6E-22 160.5 12.2 153 126-287 41-194 (197)
335 1m9s_A Internalin B; cell inva 99.7 7.6E-17 2.6E-21 183.4 18.1 171 104-289 42-212 (605)
336 2j0j_A Focal adhesion kinase 1 99.7 3.6E-18 1.2E-22 196.9 7.1 105 625-729 516-643 (656)
337 3nyv_A Calmodulin-domain prote 99.7 2.7E-18 9.1E-23 191.8 5.5 102 625-729 151-280 (484)
338 2vwi_A Serine/threonine-protei 99.7 3.5E-18 1.2E-22 178.3 5.9 105 625-729 146-286 (303)
339 4ezg_A Putative uncharacterize 99.7 3.2E-17 1.1E-21 159.7 12.2 152 104-264 43-195 (197)
340 1b6c_B TGF-B superfamily recep 99.7 2.6E-18 8.9E-23 182.7 4.8 105 625-729 172-328 (342)
341 3kmu_A ILK, integrin-linked ki 99.7 5E-18 1.7E-22 173.9 6.7 99 625-729 138-262 (271)
342 2ycf_A Serine/threonine-protei 99.7 5E-18 1.7E-22 179.0 6.8 103 625-729 139-273 (322)
343 1phk_A Phosphorylase kinase; g 99.7 1.1E-17 3.9E-22 174.0 9.3 103 625-729 149-282 (298)
344 2yfx_A Tyrosine-protein kinase 99.7 4.2E-18 1.4E-22 180.0 6.0 105 625-729 165-296 (327)
345 1m9s_A Internalin B; cell inva 99.7 9.2E-17 3.1E-21 182.8 17.4 150 327-491 61-210 (605)
346 2buj_A Serine/threonine-protei 99.7 3.4E-18 1.2E-22 179.8 4.8 105 625-729 159-298 (317)
347 2y4i_B KSR2, HKSR2, kinase sup 99.7 1.6E-17 5.3E-22 174.8 9.8 104 625-729 155-294 (319)
348 3q5i_A Protein kinase; CDPK, m 99.7 1.4E-17 4.9E-22 186.8 9.9 102 625-729 171-300 (504)
349 2i6l_A Mitogen-activated prote 99.7 1.1E-17 3.8E-22 175.9 8.4 105 625-729 145-304 (320)
350 1x8b_A WEE1HU, WEE1-like prote 99.7 6.3E-18 2.1E-22 174.8 6.4 100 625-729 140-278 (289)
351 1q8y_A SR protein kinase; tran 99.7 8.9E-18 3E-22 180.8 7.7 74 625-702 157-236 (373)
352 2w1i_A JAK2; chromosomal rearr 99.7 3.4E-18 1.1E-22 180.7 4.3 105 625-729 170-314 (326)
353 4eut_A Serine/threonine-protei 99.7 3.3E-18 1.1E-22 185.8 4.3 102 625-728 137-300 (396)
354 2iwi_A Serine/threonine-protei 99.7 7.7E-18 2.6E-22 176.7 6.7 102 625-729 164-282 (312)
355 1dce_A Protein (RAB geranylger 99.7 3.3E-20 1.1E-24 209.9 -12.6 105 327-437 459-567 (567)
356 3q60_A ROP5B; pseudokinase, tr 99.7 1E-17 3.5E-22 180.4 7.0 105 621-729 215-351 (371)
357 3qa8_A MGC80376 protein; kinas 99.7 5.4E-17 1.8E-21 184.2 11.9 103 625-729 146-296 (676)
358 1fvr_A Tyrosine-protein kinase 99.7 7.9E-18 2.7E-22 177.9 4.4 103 625-729 167-292 (327)
359 1xeu_A Internalin C; cellular 99.7 6.4E-17 2.2E-21 165.2 10.4 166 108-289 22-187 (263)
360 2wei_A Calmodulin-domain prote 99.7 2.2E-17 7.6E-22 170.9 6.6 102 625-729 146-275 (287)
361 2pml_X PFPK7, Ser/Thr protein 99.7 4.3E-17 1.5E-21 173.7 8.9 102 625-729 177-321 (348)
362 1zy4_A Serine/threonine-protei 99.7 2.4E-17 8.3E-22 171.7 6.7 105 625-729 141-282 (303)
363 1w8a_A SLIT protein; signaling 99.7 2.8E-16 9.7E-21 152.3 13.8 132 108-242 11-143 (192)
364 4b8c_D Glucose-repressible alc 99.7 1.4E-17 4.7E-22 194.3 4.9 182 106-294 174-361 (727)
365 4b8c_D Glucose-repressible alc 99.7 1.3E-17 4.4E-22 194.6 4.2 121 371-498 216-336 (727)
366 1dce_A Protein (RAB geranylger 99.7 8.4E-19 2.9E-23 198.4 -6.0 84 406-492 463-547 (567)
367 2ell_A Acidic leucine-rich nuc 99.7 3.5E-16 1.2E-20 148.2 12.0 132 129-263 24-160 (168)
368 1w8a_A SLIT protein; signaling 99.6 7.8E-16 2.7E-20 149.2 12.9 131 132-266 11-142 (192)
369 1xeu_A Internalin C; cellular 99.6 1.6E-15 5.5E-20 154.7 14.4 148 104-265 40-187 (263)
370 2ell_A Acidic leucine-rich nuc 99.6 1.8E-15 6.2E-20 143.2 12.5 135 151-287 22-160 (168)
371 2wfh_A SLIT homolog 2 protein 99.6 3.2E-15 1.1E-19 144.9 14.2 128 132-264 13-140 (193)
372 2je0_A Acidic leucine-rich nuc 99.6 4.9E-16 1.7E-20 144.0 8.0 127 129-258 17-148 (149)
373 2pzi_A Probable serine/threoni 99.6 2.2E-16 7.4E-21 183.7 5.2 96 625-727 207-317 (681)
374 3sb4_A Hypothetical leucine ri 99.6 2.5E-16 8.5E-21 166.5 4.3 101 379-484 226-327 (329)
375 2o6r_A Variable lymphocyte rec 99.6 8.2E-15 2.8E-19 139.9 14.1 129 132-264 10-138 (177)
376 2wfh_A SLIT homolog 2 protein 99.6 9.9E-15 3.4E-19 141.4 14.7 130 109-242 14-143 (193)
377 2o6r_A Variable lymphocyte rec 99.6 9.8E-15 3.4E-19 139.4 14.4 132 108-242 10-141 (177)
378 2je0_A Acidic leucine-rich nuc 99.6 1.7E-15 5.8E-20 140.3 8.6 130 151-282 15-148 (149)
379 3sb4_A Hypothetical leucine ri 99.6 9.5E-16 3.2E-20 162.0 6.5 102 354-460 225-327 (329)
380 3m2w_A MAP kinase-activated pr 99.6 1.9E-15 6.4E-20 157.4 7.9 82 625-729 142-255 (299)
381 1a9n_A U2A', U2A'; complex (nu 99.6 5.3E-15 1.8E-19 141.2 8.5 133 125-263 15-153 (176)
382 1ds9_A Outer arm dynein; leuci 99.5 3.5E-16 1.2E-20 152.5 -6.4 112 148-265 43-155 (198)
383 1a9n_A U2A', U2A'; complex (nu 99.5 7.3E-14 2.5E-18 133.2 9.2 135 147-287 13-153 (176)
384 3uqc_A Probable conserved tran 99.5 3.9E-14 1.3E-18 146.3 6.9 108 593-729 31-257 (286)
385 1ds9_A Outer arm dynein; leuci 99.5 3E-16 1E-20 152.9 -8.9 153 104-263 17-185 (198)
386 4fdw_A Leucine rich hypothetic 99.4 4.3E-12 1.5E-16 137.2 22.0 264 129-490 113-382 (401)
387 3g39_A Variable lymphocyte rec 99.4 6.3E-13 2.2E-17 125.8 12.5 105 131-238 11-115 (170)
388 3g39_A Variable lymphocyte rec 99.4 6.6E-13 2.3E-17 125.7 12.1 108 154-265 10-117 (170)
389 2r9u_A Variable lymphocyte rec 99.4 1.3E-12 4.4E-17 124.2 12.5 104 132-238 15-118 (174)
390 2r9u_A Variable lymphocyte rec 99.4 1.1E-12 3.9E-17 124.5 12.1 106 155-264 14-119 (174)
391 4fdw_A Leucine rich hypothetic 99.4 1.2E-11 4.2E-16 133.6 19.9 107 406-527 271-383 (401)
392 4fs7_A Uncharacterized protein 99.3 1.4E-10 4.6E-15 125.6 22.8 310 124-487 66-375 (394)
393 2ifg_A High affinity nerve gro 99.3 7.1E-12 2.4E-16 133.2 10.2 102 134-238 13-116 (347)
394 2ifg_A High affinity nerve gro 99.2 5.3E-11 1.8E-15 126.4 11.5 103 110-215 13-117 (347)
395 3un9_A NLR family member X1; l 99.2 2.6E-13 8.8E-18 145.3 -7.6 169 102-271 69-260 (372)
396 4fs7_A Uncharacterized protein 99.2 1.7E-09 5.7E-14 117.0 22.3 323 105-483 71-393 (394)
397 3un9_A NLR family member X1; l 99.2 1.1E-12 3.9E-17 140.3 -3.3 162 331-492 72-253 (372)
398 2vuw_A Serine/threonine-protei 99.1 1.5E-11 5E-16 130.1 1.6 75 621-702 183-278 (336)
399 4gt6_A Cell surface protein; l 99.1 1.2E-08 4.2E-13 110.1 23.5 143 130-279 65-210 (394)
400 4azs_A Methyltransferase WBDD; 99.0 2E-11 6.9E-16 137.9 -4.6 76 621-698 360-435 (569)
401 4gt6_A Cell surface protein; l 98.9 8E-08 2.7E-12 103.7 22.1 312 143-490 53-369 (394)
402 2ra8_A Uncharacterized protein 98.6 8.2E-09 2.8E-13 109.4 2.8 181 105-288 107-321 (362)
403 2ra8_A Uncharacterized protein 98.6 2.1E-08 7.3E-13 106.2 5.2 61 324-387 165-227 (362)
404 4h09_A Hypothetical leucine ri 98.6 4.1E-06 1.4E-10 89.6 21.8 123 128-259 45-167 (379)
405 4h09_A Hypothetical leucine ri 98.6 5.7E-06 2E-10 88.5 22.8 303 147-487 40-342 (379)
406 3en9_A Glycoprotease, O-sialog 98.4 2.6E-08 8.9E-13 111.8 0.3 75 625-701 456-538 (540)
407 1io0_A Tropomodulin; LRR prote 98.4 4.7E-08 1.6E-12 93.4 -0.4 91 124-214 31-136 (185)
408 3rw6_A Nuclear RNA export fact 98.3 3.8E-08 1.3E-12 99.0 -1.1 80 175-256 168-257 (267)
409 1io0_A Tropomodulin; LRR prote 98.3 2E-07 6.8E-12 89.0 1.8 62 429-490 92-163 (185)
410 3rw6_A Nuclear RNA export fact 98.2 8.6E-07 2.9E-11 89.1 4.4 102 128-231 140-257 (267)
411 3e4g_A ATP synthase subunit S, 97.8 5.3E-06 1.8E-10 77.4 2.1 34 130-163 62-95 (176)
412 3e4g_A ATP synthase subunit S, 97.7 7.4E-06 2.5E-10 76.4 1.5 83 153-235 61-149 (176)
413 1zar_A RIO2 kinase; serine kin 97.6 8.9E-06 3E-10 83.1 0.9 25 625-650 218-242 (282)
414 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00019 6.5E-09 68.1 0.3 62 129-190 41-111 (197)
415 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00059 2E-08 64.7 3.3 112 150-262 38-169 (197)
416 3rfe_A Platelet glycoprotein I 96.3 0.0081 2.8E-07 53.0 7.0 56 434-491 12-68 (130)
417 3rfe_A Platelet glycoprotein I 96.1 0.0078 2.7E-07 53.1 6.2 36 178-213 32-67 (130)
418 4gyi_A RIO2 kinase; protein ki 96.0 0.0028 9.6E-08 66.9 2.9 29 595-623 97-125 (397)
419 1zth_A RIO1 serine protein kin 94.3 0.019 6.4E-07 57.3 3.0 29 621-651 192-220 (258)
420 3sg8_A APH(2'')-ID; antibiotic 91.4 0.029 9.9E-07 57.4 -0.7 83 616-700 188-286 (304)
421 1nd4_A Aminoglycoside 3'-phosp 79.3 1 3.5E-05 43.9 3.2 34 616-649 181-214 (264)
422 2vuw_A Serine/threonine-protei 78.7 0.46 1.6E-05 48.9 0.4 31 593-624 20-50 (336)
423 3tm0_A Aminoglycoside 3'-phosp 71.1 2.4 8.3E-05 41.5 3.5 34 616-649 180-213 (263)
424 3q60_A ROP5B; pseudokinase, tr 70.0 1.4 4.7E-05 46.0 1.4 32 593-624 62-94 (371)
425 1zth_A RIO1 serine protein kin 69.8 1.3 4.4E-05 43.7 1.0 28 597-624 51-81 (258)
426 3dxp_A Putative acyl-COA dehyd 61.2 4.9 0.00017 41.4 3.6 33 618-650 215-249 (359)
427 4gkh_A Aminoglycoside 3'-phosp 54.7 7.5 0.00026 38.0 3.5 34 616-649 190-223 (272)
428 3r70_A Aminoglycoside phosphot 54.4 7.1 0.00024 39.5 3.3 36 616-651 204-239 (320)
429 2q83_A YTAA protein; 2635576, 49.2 7.9 0.00027 39.3 2.7 32 618-649 221-252 (346)
430 2pyw_A Uncharacterized protein 44.9 12 0.00041 39.6 3.3 33 617-650 230-262 (420)
431 3tdw_A Gentamicin resistance p 44.8 15 0.0005 36.9 3.8 35 617-651 188-226 (306)
432 3csv_A Aminoglycoside phosphot 44.1 15 0.00052 37.2 3.9 35 617-651 181-219 (333)
433 3ovc_A Hygromycin-B 4-O-kinase 42.6 12 0.00043 38.6 2.9 32 619-650 213-244 (362)
434 2yle_A Protein spire homolog 1 41.3 26 0.00089 33.3 4.6 75 628-717 78-156 (229)
435 2ppq_A HSK, HK, homoserine kin 41.2 15 0.0005 37.0 3.2 32 618-649 186-217 (322)
436 3ats_A Putative uncharacterize 40.8 13 0.00044 38.1 2.7 32 618-649 221-252 (357)
437 1zyl_A Hypothetical protein YI 28.7 30 0.001 34.8 3.0 31 617-649 193-223 (328)
438 3c5i_A Choline kinase; choline 24.4 43 0.0015 34.4 3.3 31 618-649 211-241 (369)
439 3i1a_A Spectinomycin phosphotr 23.9 36 0.0012 34.6 2.6 33 617-649 204-236 (339)
440 3dxq_A Choline/ethanolamine ki 23.8 47 0.0016 32.9 3.4 33 616-649 170-202 (301)
441 2qg7_A Ethanolamine kinase PV0 23.0 53 0.0018 35.0 3.8 18 617-634 288-305 (458)
442 1nw1_A Choline kinase (49.2 KD 22.0 43 0.0015 35.4 2.8 33 617-649 247-307 (429)
443 2olc_A MTR kinase, methylthior 21.3 58 0.002 33.7 3.6 32 618-650 226-257 (397)
444 2lz0_A Uncharacterized protein 21.3 2.1E+02 0.0073 22.9 6.4 43 141-184 8-50 (100)
445 3feg_A Choline/ethanolamine ki 20.9 60 0.002 33.6 3.6 34 616-649 217-254 (379)
446 2lz0_A Uncharacterized protein 20.3 1.3E+02 0.0045 24.2 4.8 37 195-232 14-50 (100)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.9e-58 Score=546.07 Aligned_cols=470 Identities=32% Similarity=0.488 Sum_probs=400.4
Q ss_pred cCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEE
Q 046589 104 LLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLS 183 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 183 (729)
..+++++++++|.+.+..+. ..+++|++|+|++|.+++.+|. ++++++|++|+|++|.+++.+|..++.+++|++|+
T Consensus 177 l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ 253 (768)
T 3rgz_A 177 CGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLN 253 (768)
T ss_dssp CTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEE
T ss_pred CCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEE
Confidence 45677777777777765543 6778888888888888776665 77888888888888888877788888888888888
Q ss_pred eeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCC-CCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccc
Q 046589 184 LCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGEL-TRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLL 262 (729)
Q Consensus 184 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l 262 (729)
|++|++++.+|.. .+++|++|++++|.+++.+|..+..+ ++|++|++++|.+++.+| ..|..+++|++|++++|.+
T Consensus 254 Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~L~L~~n~l 330 (768)
T 3rgz_A 254 ISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP-PFFGSCSLLESLALSSNNF 330 (768)
T ss_dssp CCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCC-GGGGGCTTCCEEECCSSEE
T ss_pred CCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccc-hHHhcCCCccEEECCCCcc
Confidence 8888887777664 77888888888888877788777765 888888888888876666 6678888888888888888
Q ss_pred cccCCcc-ccCCCcCCeeccccccccccccccccCCC-CcccccccceeEEEEccCCCCCCCcchhcCC--CCCCCEEEc
Q 046589 263 SGNIPPE-ISHLKKLSDHYLGINQFTGSIQSELGNCK-NFKSVLAELQIFTFSAGMNQLSGPLPSWLGK--WNQMESVWL 338 (729)
Q Consensus 263 ~~~~p~~-l~~l~~L~~l~l~~n~l~~~~~~~l~~l~-~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~--l~~L~~L~L 338 (729)
++.+|.. +..+++|+.++++.|.+++.+|..+..++ + +..++++.|.+.+.+|.+++. +++|++|++
T Consensus 331 ~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~---------L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L 401 (768)
T 3rgz_A 331 SGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSAS---------LLTLDLSSNNFSGPILPNLCQNPKNTLQELYL 401 (768)
T ss_dssp EEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTT---------CSEEECCSSEEEEECCTTTTCSTTCCCCEEEC
T ss_pred cCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcC---------CcEEEccCCCcCCCcChhhhhcccCCccEEEC
Confidence 8777765 78888888888888888877777666554 3 467889999999888888887 889999999
Q ss_pred cCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcC
Q 046589 339 NNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNML 418 (729)
Q Consensus 339 ~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l 418 (729)
++|++.+.+|..+..+++|++|++++|++++.+|..+..+++|+.|++++|.+++.+|..+. .+++|++|++++|++
T Consensus 402 ~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~---~l~~L~~L~L~~N~l 478 (768)
T 3rgz_A 402 QNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM---YVKTLETLILDFNDL 478 (768)
T ss_dssp CSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGG---GCTTCCEEECCSSCC
T ss_pred CCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHc---CCCCceEEEecCCcc
Confidence 99999999999999999999999999999999999999999999999999999998887764 567899999999999
Q ss_pred cccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCcccccccc
Q 046589 419 TGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLSRPILSKH 498 (729)
Q Consensus 419 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~~~~~~ 498 (729)
++.+|..+.++++|++|++++|++++.+|.+++.+++|++|+|++|++++.+|..+..+++|+.||+++|+++|.+|...
T Consensus 479 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~ 558 (768)
T 3rgz_A 479 TGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558 (768)
T ss_dssp CSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGG
T ss_pred cCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred cccccc----------------------------------------------------------cCCCCcccCCCCCeEe
Q 046589 499 SSYFHE----------------------------------------------------------VNIPDLSYSHNYRKFD 520 (729)
Q Consensus 499 ~~~~~~----------------------------------------------------------~~~~~~~~~~~l~~ld 520 (729)
...... .....+..+.+++.+|
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~Ld 638 (768)
T 3rgz_A 559 FKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD 638 (768)
T ss_dssp GTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEE
T ss_pred hcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEE
Confidence 421100 0011234457789999
Q ss_pred cCCCcCcccCCchhhccccc---------cccccccccccccCCceeeccCCcceeecccccccccccccccCCcccccC
Q 046589 521 LSYNMLSGPIPKELGSCVVV---------LTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTNLDLSYNEFDG 591 (729)
Q Consensus 521 ls~N~l~g~~p~~~~~~~~l---------l~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 591 (729)
+++|+++|.+|.+++.+..+ ++|.+|.+++++++|++||||+|+++|.+|..|..+++|++||+|+|+|+|
T Consensus 639 Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g 718 (768)
T 3rgz_A 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSG 718 (768)
T ss_dssp CCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEE
T ss_pred CcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccc
Confidence 99999999999999887655 789999999999999999999999999999999999999999999999997
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.6e-55 Score=520.98 Aligned_cols=456 Identities=35% Similarity=0.505 Sum_probs=400.6
Q ss_pred cCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEE
Q 046589 104 LLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLS 183 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 183 (729)
..+++++++++|.+.+.+|. +.++++|++|++++|.+++..|..++++++|++|+|++|++++.+|.. .+++|++|+
T Consensus 199 l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~ 275 (768)
T 3rgz_A 199 CVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLS 275 (768)
T ss_dssp CTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEE
T ss_pred CCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEE
Confidence 56799999999999988877 999999999999999999999999999999999999999999888875 899999999
Q ss_pred eeccCCCccCCccccCC-CCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccc
Q 046589 184 LCSNSFTGEMPSELGDM-KQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLL 262 (729)
Q Consensus 184 Ls~N~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l 262 (729)
|++|++++.+|..+.++ ++|++|+|++|.+++.+|..++++++|++|++++|.+++.+|...+..+++|++|++++|.+
T Consensus 276 L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l 355 (768)
T 3rgz_A 276 LAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 355 (768)
T ss_dssp CCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEE
T ss_pred CcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCcc
Confidence 99999999999999876 99999999999999999999999999999999999998889877799999999999999999
Q ss_pred cccCCccccCCC-cCCeeccccccccccccccccC--CCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEcc
Q 046589 263 SGNIPPEISHLK-KLSDHYLGINQFTGSIQSELGN--CKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLN 339 (729)
Q Consensus 263 ~~~~p~~l~~l~-~L~~l~l~~n~l~~~~~~~l~~--l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~ 339 (729)
++.+|..+..+. +|+.++++.|.+++.++..+.. ++. +..++++.|.+.+.+|.+++.+++|+.|+++
T Consensus 356 ~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~---------L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 426 (768)
T 3rgz_A 356 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNT---------LQELYLQNNGFTGKIPPTLSNCSELVSLHLS 426 (768)
T ss_dssp EECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCC---------CCEEECCSSEEEEECCGGGGGCTTCCEEECC
T ss_pred CccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCC---------ccEEECCCCccccccCHHHhcCCCCCEEECc
Confidence 999999999987 9999999999999888776654 333 4677888888888888899999999999999
Q ss_pred CCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCc
Q 046589 340 NNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLT 419 (729)
Q Consensus 340 ~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 419 (729)
+|++.+.+|..+..+++|++|++++|++++.+|..+..+++|++|++++|.+++.+|..+. ++++|++|+|++|+++
T Consensus 427 ~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~---~l~~L~~L~L~~N~l~ 503 (768)
T 3rgz_A 427 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLS---NCTNLNWISLSNNRLT 503 (768)
T ss_dssp SSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGG---GCTTCCEEECCSSCCC
T ss_pred CCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHh---cCCCCCEEEccCCccC
Confidence 9999888888888999999999999999988898899999999999999999888877664 4667888999999999
Q ss_pred ccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCchhhh------------------------
Q 046589 420 GRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIPEKIA------------------------ 475 (729)
Q Consensus 420 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~------------------------ 475 (729)
+.+|.+++.+++|++|++++|++++.+|..++.+++|+.|++++|+++|.+|..+.
T Consensus 504 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (768)
T 3rgz_A 504 GEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGM 583 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSC
T ss_pred CcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccc
Confidence 88999999999999999999999988999999999999999999988887776543
Q ss_pred ----------------------------------------------cCCCCCEEeCCCCcCcccccccccccccccCCCC
Q 046589 476 ----------------------------------------------DLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPD 509 (729)
Q Consensus 476 ----------------------------------------------~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~ 509 (729)
.+++|+.||+++|+++|.+|..+.
T Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~---------- 653 (768)
T 3rgz_A 584 KKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIG---------- 653 (768)
T ss_dssp CTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGG----------
T ss_pred cccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHh----------
Confidence 246788899999999998887766
Q ss_pred cccCCCCCeEecCCCcCcccCCchhhccccc---------cccccccccccccCCceeeccCCcceeecccccccccccc
Q 046589 510 LSYSHNYRKFDLSYNMLSGPIPKELGSCVVV---------LTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLT 580 (729)
Q Consensus 510 ~~~~~~l~~ldls~N~l~g~~p~~~~~~~~l---------l~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 580 (729)
.++.|+.||+++|+++|.+|..++.+..+ ++|.+|..+..++.|++||+|+|+++|.+|.. ..+..+.
T Consensus 654 --~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~ 730 (768)
T 3rgz_A 654 --SMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFP 730 (768)
T ss_dssp --GCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSC
T ss_pred --ccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCC
Confidence 67788899999999999999988876654 78899999999999999999999999999964 2233444
Q ss_pred cccCCcc
Q 046589 581 NLDLSYN 587 (729)
Q Consensus 581 ~L~Ls~N 587 (729)
...+.+|
T Consensus 731 ~~~~~gN 737 (768)
T 3rgz_A 731 PAKFLNN 737 (768)
T ss_dssp GGGGCSC
T ss_pred HHHhcCC
Confidence 4444444
No 3
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.1e-49 Score=459.77 Aligned_cols=470 Identities=19% Similarity=0.163 Sum_probs=332.7
Q ss_pred cCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEE
Q 046589 104 LLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLS 183 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 183 (729)
...++++++++|.+++..|..+.++++|++|+|++|+++++.|.+|+++++|++|+|++|++++..|..|+.+++|++|+
T Consensus 32 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp CTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred CCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEee
Confidence 34688999999999987788999999999999999999999999999999999999999999988899999999999999
Q ss_pred eeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCC--EEEccccc
Q 046589 184 LCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLS--YLDVSNNL 261 (729)
Q Consensus 184 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~--~L~Ls~N~ 261 (729)
+++|++++..|..++++++|++|++++|.+++..+..+..+++|++|++++|.++ .++...|..+++|+ .|++++|.
T Consensus 112 L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~l~L~l~~n~ 190 (606)
T 3t6q_A 112 FIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIH-YLSKEDMSSLQQATNLSLNLNGND 190 (606)
T ss_dssp CTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCC-EECHHHHHTTTTCCSEEEECTTCC
T ss_pred ccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCccc-ccChhhhhhhcccceeEEecCCCc
Confidence 9999999877888999999999999999998755455556999999999999998 45557889999999 89999999
Q ss_pred ccccCCccccCCCcCCeeccccccccccccccc----------cCCCC---------cccccccceeEEEEccCCCCCCC
Q 046589 262 LSGNIPPEISHLKKLSDHYLGINQFTGSIQSEL----------GNCKN---------FKSVLAELQIFTFSAGMNQLSGP 322 (729)
Q Consensus 262 l~~~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l----------~~l~~---------l~~~l~~l~l~~l~l~~n~l~~~ 322 (729)
+++..|..+.. ..|+.++++.|.........+ ..+.. ....+....+..++++.|.+.+.
T Consensus 191 l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~ 269 (606)
T 3t6q_A 191 IAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNI 269 (606)
T ss_dssp CCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSC
T ss_pred cCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCcc
Confidence 99877766544 567777776654110000000 00000 00111223567777788887777
Q ss_pred cchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCcccccccc
Q 046589 323 LPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRC 402 (729)
Q Consensus 323 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 402 (729)
.+..+..+++|++|++++|++. .+|..+..+++|++|++++|++++..|..+..+++|+.|++++|.+.+.++.. .+
T Consensus 270 ~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~--~~ 346 (606)
T 3t6q_A 270 SSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTG--CL 346 (606)
T ss_dssp CTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSS--TT
T ss_pred CHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchh--hh
Confidence 7777777888888888888776 56677777788888888888887766777777778888888877776544432 12
Q ss_pred CCCCCCcEEEcCCCcCcccC--CcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCch-hhhcCCC
Q 046589 403 TNLSQLEKLDLSSNMLTGRI--PKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIPE-KIADLAQ 479 (729)
Q Consensus 403 ~~l~~L~~L~Ls~N~l~~~~--p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~ 479 (729)
..+++|++|++++|.+++.. +..+..+++|++|++++|.+.+..|..+..+++|+.|++++|++++..|. .+..+++
T Consensus 347 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 426 (606)
T 3t6q_A 347 ENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHL 426 (606)
T ss_dssp TTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTT
T ss_pred hccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCccc
Confidence 45566777777777776554 56667777777777777777666666677777777777777777655443 3666777
Q ss_pred CCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecCCCcCcccC---Cchhhccccc---------ccccccc
Q 046589 480 LQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPI---PKELGSCVVV---------LTGYIPR 547 (729)
Q Consensus 480 L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~---p~~~~~~~~l---------l~g~ip~ 547 (729)
|+.|++++|.+++..+..+. .+++|+.|++++|++++.. +..+..+..+ +++..|.
T Consensus 427 L~~L~l~~n~l~~~~~~~~~------------~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 494 (606)
T 3t6q_A 427 LKVLNLSHSLLDISSEQLFD------------GLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQH 494 (606)
T ss_dssp CCEEECTTCCCBTTCTTTTT------------TCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTT
T ss_pred CCEEECCCCccCCcCHHHHh------------CCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChh
Confidence 77777777776654433322 3444555555555554311 1222222111 3334455
Q ss_pred ccccccCCceeeccCCcceeecccccccccccccccCCcccccC
Q 046589 548 SLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTNLDLSYNEFDG 591 (729)
Q Consensus 548 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 591 (729)
.|..+++|+.|+|++|++++.+|..|..++.| .|++++|++++
T Consensus 495 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~ 537 (606)
T 3t6q_A 495 AFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISI 537 (606)
T ss_dssp TTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCC
T ss_pred hhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccc
Confidence 56666666666666666666666666666666 66666666654
No 4
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.4e-48 Score=448.66 Aligned_cols=463 Identities=22% Similarity=0.205 Sum_probs=382.6
Q ss_pred EEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccC
Q 046589 109 YQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNS 188 (729)
Q Consensus 109 ~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~ 188 (729)
.++.++..++ .+|..+. +++++|||++|.++++.+.+|+++++|++|+|++|++++..|..|+++++|++|+|++|+
T Consensus 16 ~~~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 16 TYNCENLGLN-EIPGTLP--NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEECCCCCcc-cCcCCCC--CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 4566666666 4665554 379999999999999999999999999999999999998889999999999999999999
Q ss_pred CCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCc
Q 046589 189 FTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPP 268 (729)
Q Consensus 189 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 268 (729)
+++..|..|+++++|++|++++|.+++..|..++++++|++|++++|.+++ ++...+..+++|++|++++|.+++..|.
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 171 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISS-IKLPKGFPTEKLKVLDFQNNAIHYLSKE 171 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCC-CCCCTTCCCTTCCEEECCSSCCCEECHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccc-cCcccccCCcccCEEEcccCcccccChh
Confidence 999999999999999999999999997778889999999999999999984 4334455699999999999999988888
Q ss_pred cccCCCcCC--eeccccccccccccccccCCCCccc--------------ccccceeEEEEccCC---CCCCCcchhcCC
Q 046589 269 EISHLKKLS--DHYLGINQFTGSIQSELGNCKNFKS--------------VLAELQIFTFSAGMN---QLSGPLPSWLGK 329 (729)
Q Consensus 269 ~l~~l~~L~--~l~l~~n~l~~~~~~~l~~l~~l~~--------------~l~~l~l~~l~l~~n---~l~~~~p~~l~~ 329 (729)
.++.+++|+ .++++.|.+++..+..+.. ..+.. .+....+..+..... ......+..+..
T Consensus 172 ~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~ 250 (606)
T 3t6q_A 172 DMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEG 250 (606)
T ss_dssp HHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGG
T ss_pred hhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhch
Confidence 999999999 8899999998776655432 11110 011111222221110 001111222222
Q ss_pred CC--CCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCC
Q 046589 330 WN--QMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQ 407 (729)
Q Consensus 330 l~--~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~ 407 (729)
+. +++.|++++|.+.+..+..+..+++|++|++++|+++ .+|..+..+++|++|++++|.+.+..+..+ ..+++
T Consensus 251 l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~---~~l~~ 326 (606)
T 3t6q_A 251 LCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISA---SNFPS 326 (606)
T ss_dssp GGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCG---GGCTT
T ss_pred hhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhh---hccCc
Confidence 22 7899999999999888888999999999999999998 688889999999999999999998777665 45678
Q ss_pred CcEEEcCCCcCcccCCc-ccCCCCCCCEEEccCCcccccc--CcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEe
Q 046589 408 LEKLDLSSNMLTGRIPK-EIGNLRSIQILKLNSNFFNGSI--PMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLD 484 (729)
Q Consensus 408 L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~Ld 484 (729)
|++|++++|.+.+.+|. .+..+++|++|++++|.+++.. +..+..+++|+.|++++|++++..|..+..+++|+.|+
T Consensus 327 L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 406 (606)
T 3t6q_A 327 LTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLD 406 (606)
T ss_dssp CSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEE
T ss_pred CCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEE
Confidence 99999999999876655 5999999999999999998766 78899999999999999999999999999999999999
Q ss_pred CCCCcCcccccccccccccccCCCCcccCCCCCeEecCCCcCcccCCchhhccccc---------ccc-c--cccccccc
Q 046589 485 LSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVV---------LTG-Y--IPRSLGHL 552 (729)
Q Consensus 485 Ls~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~l---------l~g-~--ip~~~~~l 552 (729)
+++|++++..+... +..+++|+.|++++|.+++..|..++.+..+ +++ . .+..+..+
T Consensus 407 l~~n~l~~~~~~~~-----------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l 475 (606)
T 3t6q_A 407 LAFTRLKVKDAQSP-----------FQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTL 475 (606)
T ss_dssp CTTCCEECCTTCCT-----------TTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGC
T ss_pred CCCCcCCCcccchh-----------hhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccC
Confidence 99999986544321 2367889999999999999888877655443 333 1 23568899
Q ss_pred cCCceeeccCCcceeecccccccccccccccCCcccccC
Q 046589 553 SCSVKLNLSGNKLSVLVPTSFGNLNGLTNLDLSYNEFDG 591 (729)
Q Consensus 553 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 591 (729)
++|++|++++|++++.+|..|..+++|+.|++++|++++
T Consensus 476 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 514 (606)
T 3t6q_A 476 GRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTS 514 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCG
T ss_pred CCccEEECCCCccCccChhhhccccCCCEEECCCCccCc
Confidence 999999999999999999999999999999999999987
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.1e-47 Score=446.77 Aligned_cols=467 Identities=22% Similarity=0.198 Sum_probs=288.6
Q ss_pred CCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEe
Q 046589 105 LRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSL 184 (729)
Q Consensus 105 ~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L 184 (729)
.+++++++++|.+++..+..+.++++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 45778888888888766667888888888888888888888888888888888888888888555556888888888888
Q ss_pred eccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhc--cCCCCCEEEcccccc
Q 046589 185 CSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFT--NLQSLSYLDVSNNLL 262 (729)
Q Consensus 185 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~--~l~~L~~L~Ls~N~l 262 (729)
++|++++..|..|+++++|++|++++|.+++..|..++++++|++|++++|.+++ ++...+. .+++|++|++++|.+
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQA-LKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCC-BCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccc-cCHHHhhccccccccEEECCCCcc
Confidence 8888887777788888888888888888887777788888888888888888874 4434443 457888888888888
Q ss_pred cccCCccccCCCcC---------------------------CeeccccccccccccccccCCCCcccccccceeEEEEcc
Q 046589 263 SGNIPPEISHLKKL---------------------------SDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAG 315 (729)
Q Consensus 263 ~~~~p~~l~~l~~L---------------------------~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~ 315 (729)
++..|..+..+.+| +.++++.|.+++..+..+..++. ..+..++++
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~-------~~L~~L~Ls 256 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKW-------TNLTMLDLS 256 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGG-------SCCCEEECT
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCc-------CCCCEEECC
Confidence 87777766655444 44444444444444433333221 114566666
Q ss_pred CCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCC-----CCcc----cccCCCCCcEEEc
Q 046589 316 MNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSG-----SIPR----ELNDSESLVEINL 386 (729)
Q Consensus 316 ~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-----~~p~----~~~~l~~L~~L~L 386 (729)
.|.+.+..|.+++.+++|++|++++|++.+..|..+..+++|++|++++|...+ .+|. .+..+++|+.|++
T Consensus 257 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l 336 (680)
T 1ziw_A 257 YNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNM 336 (680)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEEC
T ss_pred CCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEEC
Confidence 666666666666666777777777776666655555555555555555443322 1111 3444445555555
Q ss_pred CCCCCCCCccccccccCC-------------------------CCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCc
Q 046589 387 DGNMLSGTIEDVFGRCTN-------------------------LSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNF 441 (729)
Q Consensus 387 ~~N~l~~~~~~~~~~~~~-------------------------l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 441 (729)
++|.+++..+..|..+.+ .++|+.|++++|++++..|..+..+++|++|++++|.
T Consensus 337 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 416 (680)
T 1ziw_A 337 EDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNE 416 (680)
T ss_dssp CSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCc
Confidence 555544444333321111 1245555555555555555566666666666666666
Q ss_pred cccccC-cCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCcc--cccccccccccccCCCCcccCCCCCe
Q 046589 442 FNGSIP-MRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLSR--PILSKHSSYFHEVNIPDLSYSHNYRK 518 (729)
Q Consensus 442 l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~--~~~~~~~~~~~~~~~~~~~~~~~l~~ 518 (729)
+++.+| ..+..+++|++|++++|++++..+..+..+++|+.|++++|.+++ .+|.. +..+.+|+.
T Consensus 417 l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~------------~~~l~~L~~ 484 (680)
T 1ziw_A 417 IGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSP------------FQPLRNLTI 484 (680)
T ss_dssp CEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCT------------TTTCTTCCE
T ss_pred CccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcc------------cccCCCCCE
Confidence 655444 455555666666666666555555555555555555555555431 22221 224455555
Q ss_pred EecCCCcCcccCCchhhccccc---------cccc--------cccccccccCCceeeccCCcceeeccccccccccccc
Q 046589 519 FDLSYNMLSGPIPKELGSCVVV---------LTGY--------IPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTN 581 (729)
Q Consensus 519 ldls~N~l~g~~p~~~~~~~~l---------l~g~--------ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 581 (729)
|++++|++++..|..+..+..+ +++. .+..|.++++|++|+|++|+++.+.+..|.++++|+.
T Consensus 485 L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~ 564 (680)
T 1ziw_A 485 LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKI 564 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred EECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcce
Confidence 5555555554444333332221 1111 1123566667777777777777555556677777777
Q ss_pred ccCCcccccC
Q 046589 582 LDLSYNEFDG 591 (729)
Q Consensus 582 L~Ls~N~l~g 591 (729)
|++++|++++
T Consensus 565 L~Ls~N~l~~ 574 (680)
T 1ziw_A 565 IDLGLNNLNT 574 (680)
T ss_dssp EECCSSCCCC
T ss_pred eECCCCCCCc
Confidence 7777776664
No 6
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.2e-46 Score=440.41 Aligned_cols=470 Identities=23% Similarity=0.189 Sum_probs=262.6
Q ss_pred CCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEe
Q 046589 105 LRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSL 184 (729)
Q Consensus 105 ~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L 184 (729)
.+++++++++|.+.+..|..+.++++|++|+|++|.++++++..|+++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 44566666666666555555666666666666666666655555666666666666666666555556666666666666
Q ss_pred eccCCCccCCccccCCCCCcEEEccCCCCCCCCccccC--CCCCCCeeeccCCcCCCCCChhhhccC-------------
Q 046589 185 CSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLG--ELTRLQDLDLSDNLLSGSLTVSLFTNL------------- 249 (729)
Q Consensus 185 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~--~l~~L~~L~L~~N~l~~~~~~~~~~~l------------- 249 (729)
++|.+++..|..+.++++|++|++++|.+++..+..++ .+++|++|++++|.+++..+ ..|..+
T Consensus 129 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~~~l 207 (680)
T 1ziw_A 129 SHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSP-GCFHAIGRLFGLFLNNVQL 207 (680)
T ss_dssp CSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCT-TGGGGSSEECEEECTTCCC
T ss_pred CCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccCh-hhhhhhhhhhhhhcccccc
Confidence 66666666666666666666666666666655444433 34566666666666553222 222211
Q ss_pred --------------CCCCEEEcccccccccCCccccCCCc--CCeeccccccccccccccccCCCCcccc----------
Q 046589 250 --------------QSLSYLDVSNNLLSGNIPPEISHLKK--LSDHYLGINQFTGSIQSELGNCKNFKSV---------- 303 (729)
Q Consensus 250 --------------~~L~~L~Ls~N~l~~~~p~~l~~l~~--L~~l~l~~n~l~~~~~~~l~~l~~l~~~---------- 303 (729)
++|+.|++++|.+++..|..+..++. |+.++++.|.+++..+..+..++++...
T Consensus 208 ~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 287 (680)
T 1ziw_A 208 GPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHL 287 (680)
T ss_dssp HHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEE
T ss_pred ChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCcc
Confidence 33444444444444444444444433 5555555554444444444333332100
Q ss_pred ----cccc-eeEEEEccCCCCCC-----Ccch----hcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCC
Q 046589 304 ----LAEL-QIFTFSAGMNQLSG-----PLPS----WLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSG 369 (729)
Q Consensus 304 ----l~~l-~l~~l~l~~n~l~~-----~~p~----~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 369 (729)
+..+ .+..++++.|...+ .+|. .+..+++|++|++++|.+.+..+..+..+++|++|++++|.+..
T Consensus 288 ~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~ 367 (680)
T 1ziw_A 288 FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 367 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCC
T ss_pred ChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhh
Confidence 0000 02334444333222 2222 45566777777777777776666667777777766666665332
Q ss_pred CC--cccccC--CCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCC-cccCCCCCCCEEEccCCcccc
Q 046589 370 SI--PRELND--SESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIP-KEIGNLRSIQILKLNSNFFNG 444 (729)
Q Consensus 370 ~~--p~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~ 444 (729)
.. +..+.. .++|+.|++++|++++..+..| ..+++|++|++++|.+++.+| ..+.++++|++|++++|++.+
T Consensus 368 ~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 444 (680)
T 1ziw_A 368 RTLTNETFVSLAHSPLHILNLTKNKISKIESDAF---SWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQ 444 (680)
T ss_dssp CEECTTTTGGGTTSCCCEEECTTSCCCEECTTTT---TTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEE
T ss_pred hhcchhhhcccccCcCceEECCCCCCCeEChhhh---hCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcce
Confidence 11 111111 1345555555555555444443 345566677777777765544 566667777777777776665
Q ss_pred ccCcCccCCCCCCEEEcccccCC--ccCchhhhcCCCCCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecC
Q 046589 445 SIPMRLGDSTSLNILELGNNNLN--GSIPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLS 522 (729)
Q Consensus 445 ~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls 522 (729)
..+..+..+++|+.|++++|.++ +.+|..+..+++|+.|++++|++++..+..+ ..+.+|+.|+++
T Consensus 445 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~------------~~l~~L~~L~Ls 512 (680)
T 1ziw_A 445 LTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDML------------EGLEKLEILDLQ 512 (680)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTT------------TTCTTCCEEECC
T ss_pred eChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhh------------ccccccCEEeCC
Confidence 55555556666666666666554 3455555666666666666666553222111 133444555555
Q ss_pred CCcCcccCCc--------hhhccccc---------cccccc-cccccccCCceeeccCCcceeecccccccccccccccC
Q 046589 523 YNMLSGPIPK--------ELGSCVVV---------LTGYIP-RSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTNLDL 584 (729)
Q Consensus 523 ~N~l~g~~p~--------~~~~~~~l---------l~g~ip-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 584 (729)
+|++++..+. .+..+..+ ++ .+| ..|.++++|+.|||++|+++++.+..|.++++|+.|++
T Consensus 513 ~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 591 (680)
T 1ziw_A 513 HNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNL 591 (680)
T ss_dssp SSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEEC
Confidence 5554432111 01111111 12 344 35788889999999999999888888888999999999
Q ss_pred CcccccC
Q 046589 585 SYNEFDG 591 (729)
Q Consensus 585 s~N~l~g 591 (729)
++|++++
T Consensus 592 ~~N~l~~ 598 (680)
T 1ziw_A 592 QKNLITS 598 (680)
T ss_dssp TTSCCCB
T ss_pred CCCcCCc
Confidence 9998886
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.3e-47 Score=442.46 Aligned_cols=462 Identities=21% Similarity=0.186 Sum_probs=305.9
Q ss_pred cCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEE
Q 046589 104 LLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLS 183 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 183 (729)
..+++.+++++|.+++..+..+.++++|++|+|++|.++++.+.+|+++++|++|+|++|++++..|..|+++++|++|+
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 45689999999999987777999999999999999999999999999999999999999999988899999999999999
Q ss_pred eeccCCCccCCccccCCCCCcEEEccCCCCCC-CCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCC----CEEEcc
Q 046589 184 LCSNSFTGEMPSELGDMKQLKSLDFSGNGFNG-TVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSL----SYLDVS 258 (729)
Q Consensus 184 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L----~~L~Ls 258 (729)
|++|++++..|..|+++++|++|++++|.+++ .+|..++++++|++|++++|.+++ ++...|..+++| .+|+++
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~~l~~L~l~ 189 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQT-ITVNDLQFLRENPQVNLSLDMS 189 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCE-ECTTTTHHHHHCTTCCCEEECT
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCccee-cChhhhhhhhccccccceeecc
Confidence 99999998887899999999999999999986 579999999999999999999985 444556665555 489999
Q ss_pred cccccccCCccccCCCcCCeeccccccccc-cccccccCCCCccc-----------------------ccccceeEEEEc
Q 046589 259 NNLLSGNIPPEISHLKKLSDHYLGINQFTG-SIQSELGNCKNFKS-----------------------VLAELQIFTFSA 314 (729)
Q Consensus 259 ~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~-~~~~~l~~l~~l~~-----------------------~l~~l~l~~l~l 314 (729)
+|.+++..+..+... +|+.++++.|.+++ ..+..+.+++.+.. .+..+.+..+.+
T Consensus 190 ~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 268 (606)
T 3vq2_A 190 LNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRL 268 (606)
T ss_dssp TCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEE
T ss_pred CCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheec
Confidence 999997665555544 89999999998763 23333333333221 112223344444
Q ss_pred -cCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCC
Q 046589 315 -GMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSG 393 (729)
Q Consensus 315 -~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 393 (729)
..+.+.+.+|. +..+++|+.|++++|.+. .+| .+..+++|++|++++|++ +.+| .+ .+++|+.|++++|...+
T Consensus 269 ~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~ 342 (606)
T 3vq2_A 269 TYTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSI 342 (606)
T ss_dssp CCCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCE
T ss_pred cccccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCcc
Confidence 44555555554 555566666666666654 233 455556666666666666 3444 23 55555555555553322
Q ss_pred CccccccccCCCCCCcEEEcCCCcCccc--CCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCc
Q 046589 394 TIEDVFGRCTNLSQLEKLDLSSNMLTGR--IPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIP 471 (729)
Q Consensus 394 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 471 (729)
.. .+..+++|++|++++|.+++. .|..+..+++|++|++++|.+++ +|..+..+++|+.|++++|++++..|
T Consensus 343 ~~-----~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~ 416 (606)
T 3vq2_A 343 SF-----KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTE 416 (606)
T ss_dssp EC-----CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTT
T ss_pred ch-----hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccC
Confidence 11 123344555555555555443 24445555555555555555542 34445555555555555555554444
Q ss_pred -hhhhcCCCCCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecCCCcCccc-CCchhhccccc---------
Q 046589 472 -EKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGP-IPKELGSCVVV--------- 540 (729)
Q Consensus 472 -~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~-~p~~~~~~~~l--------- 540 (729)
..+..+++|++|++++|.+++..|..+. .+++|+.|++++|++++. +|..++.+..+
T Consensus 417 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~------------~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 484 (606)
T 3vq2_A 417 FSAFLSLEKLLYLDISYTNTKIDFDGIFL------------GLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQ 484 (606)
T ss_dssp TTTTTTCTTCCEEECTTSCCEECCTTTTT------------TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred hhhhhccccCCEEECcCCCCCccchhhhc------------CCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCc
Confidence 3455555555555555555443332221 334444455555544432 23332222111
Q ss_pred cccccccccccccCCceeeccCCcceeecccccccccccccccCCcccccC
Q 046589 541 LTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTNLDLSYNEFDG 591 (729)
Q Consensus 541 l~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 591 (729)
+++..|..+..+++|++|+|++|++++.+|..|.++++|+.|++++|+++.
T Consensus 485 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 535 (606)
T 3vq2_A 485 LEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET 535 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC
T ss_pred CCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc
Confidence 233455667777788888888888888778888888888888888887764
No 8
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=8.6e-46 Score=442.31 Aligned_cols=463 Identities=21% Similarity=0.203 Sum_probs=339.5
Q ss_pred hcCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCC-CCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcE
Q 046589 103 LLLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFG-QPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLET 181 (729)
Q Consensus 103 ~~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~ 181 (729)
.+.+++.|+|++|.+++..+..+.++++|++|||++|...+ +.+.+|+++++|++|+|++|.+++..|+.|+++++|++
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 101 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFE 101 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCC
T ss_pred CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCE
Confidence 36778999999999998888899999999999999996554 45788999999999999999999888999999999999
Q ss_pred EEeeccCCCccCCcc--ccCCCCCcEEEccCCCCCCCCc-cccCCCCCCCeeeccCCcCCCCCChhhhccC--CCCCEEE
Q 046589 182 LSLCSNSFTGEMPSE--LGDMKQLKSLDFSGNGFNGTVP-IRLGELTRLQDLDLSDNLLSGSLTVSLFTNL--QSLSYLD 256 (729)
Q Consensus 182 L~Ls~N~l~~~~p~~--l~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l--~~L~~L~ 256 (729)
|+|++|.+++.+|.. |.++++|++|+|++|.+++..+ ..|+++++|++|++++|.+++..+ ..+..+ ++|+.|+
T Consensus 102 L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~-~~l~~l~~~~L~~L~ 180 (844)
T 3j0a_A 102 LRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCE-HELEPLQGKTLSFFS 180 (844)
T ss_dssp EECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCS-GGGHHHHHCSSCCCE
T ss_pred eeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCH-HHcccccCCccceEE
Confidence 999999999867665 9999999999999999987655 579999999999999999985554 666666 8999999
Q ss_pred cccccccccCCccccCCCc------CCeeccccccccccccccccCCCC---ccc-----------------------cc
Q 046589 257 VSNNLLSGNIPPEISHLKK------LSDHYLGINQFTGSIQSELGNCKN---FKS-----------------------VL 304 (729)
Q Consensus 257 Ls~N~l~~~~p~~l~~l~~------L~~l~l~~n~l~~~~~~~l~~l~~---l~~-----------------------~l 304 (729)
+++|.+.+..|..++.+.+ |+.++++.|.+++..+..+..... +.. .+
T Consensus 181 L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f 260 (844)
T 3j0a_A 181 LAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTF 260 (844)
T ss_dssp ECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTT
T ss_pred CCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhh
Confidence 9999999888887777665 999999999988777665543211 000 00
Q ss_pred c---cceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCC
Q 046589 305 A---ELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESL 381 (729)
Q Consensus 305 ~---~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 381 (729)
. ...+..++++.|.+.+..|..+..+++|+.|++++|++.+..|..|..+++|++|+|++|++++..|..+..+++|
T Consensus 261 ~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 340 (844)
T 3j0a_A 261 AGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKV 340 (844)
T ss_dssp TTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTC
T ss_pred hccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCC
Confidence 0 1235667777777777667777777777777777777777777777777777777777777777777777777777
Q ss_pred cEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEc
Q 046589 382 VEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILEL 461 (729)
Q Consensus 382 ~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 461 (729)
+.|++++|.+.+..+..| ..+++|++|+|++|.+++. ..+++|+.|++++|+++ .+|.. ..+++.|++
T Consensus 341 ~~L~L~~N~i~~~~~~~~---~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~l 408 (844)
T 3j0a_A 341 AYIDLQKNHIAIIQDQTF---KFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPKI---NLTANLIHL 408 (844)
T ss_dssp CEEECCSCCCCCCCSSCS---CSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCCC---CTTCCEEEC
T ss_pred CEEECCCCCCCccChhhh---cCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccccc---ccccceeec
Confidence 777777777776665544 4456677777777777642 22677777777777776 44433 356777788
Q ss_pred ccccCCccC-chhhhcCCCCCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecCCCcCcccC-----Cchhh
Q 046589 462 GNNNLNGSI-PEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPI-----PKELG 535 (729)
Q Consensus 462 s~N~l~~~~-p~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~-----p~~~~ 535 (729)
++|++++.. +..+..+++|+.|++++|++++..+... +..+++|+.|++++|.+++.. |..+.
T Consensus 409 s~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-----------~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 477 (844)
T 3j0a_A 409 SENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQT-----------PSENPSLEQLFLGENMLQLAWETELCWDVFE 477 (844)
T ss_dssp CSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSS-----------SCSCTTCCBCEEESCCCSSSCCSCCCSSCSS
T ss_pred ccCccccCchhhhhhcCCccceeeCCCCcccccccccc-----------cccCCccccccCCCCccccccccccchhhhc
Confidence 888777532 2345578888888888888875322211 123456777777777775322 22222
Q ss_pred ccccc---------cccccccccccccCCceeeccCCcceeecccccccccccccccCCcccccC
Q 046589 536 SCVVV---------LTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTNLDLSYNEFDG 591 (729)
Q Consensus 536 ~~~~l---------l~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 591 (729)
.+..+ +++..|..|..+++|+.|+|++|++++.+|..+. ++|+.|++++|+|++
T Consensus 478 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~ 540 (844)
T 3j0a_A 478 GLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLA 540 (844)
T ss_dssp CBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCC
T ss_pred CcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCC
Confidence 22211 4445555666666666777777766666655554 566666666666665
No 9
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.7e-47 Score=437.43 Aligned_cols=425 Identities=21% Similarity=0.266 Sum_probs=267.2
Q ss_pred hhhhhc---ccccccchhHHHHHhcCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCC------C----------
Q 046589 83 KTLSRR---LGLAIANALKDLEELLLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLF------G---------- 143 (729)
Q Consensus 83 ~~l~~~---~~~~~~~~l~~l~~~~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~------~---------- 143 (729)
.....| .|+.|.. ..+|+.++|+++++.|.+|+.++.|++|++|||++|.+. +
T Consensus 64 ~~~c~w~~~~GV~C~~--------~~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~ 135 (636)
T 4eco_A 64 KELDMWGAQPGVSLNS--------NGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSD 135 (636)
T ss_dssp SCGGGTTCCTTEEECT--------TCCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCH
T ss_pred CCcccccCCCCeEEcC--------CCCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchH
Confidence 345667 7888864 268999999999999999999999999999999999751 1
Q ss_pred -----------------CCccccc-------------------CCCCCCEEec--cCCcCcccCCccccCCCCCcEEEee
Q 046589 144 -----------------QPSPQVS-------------------NLKRLKMLSL--GENQLSGSLPSQLGVLTWLETLSLC 185 (729)
Q Consensus 144 -----------------~~~~~~~-------------------~l~~L~~L~L--s~N~l~~~~p~~l~~L~~L~~L~Ls 185 (729)
.++..+. ....++.+.+ .+|++++ +|..|+++++|++|+|+
T Consensus 136 ~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls 214 (636)
T 4eco_A 136 EQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMG 214 (636)
T ss_dssp HHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEE
T ss_pred HHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECc
Confidence 0111111 1112222222 2678887 89999999999999999
Q ss_pred ccCCCcc-----------------CCcccc--CCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCc-CCC-CCChh
Q 046589 186 SNSFTGE-----------------MPSELG--DMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNL-LSG-SLTVS 244 (729)
Q Consensus 186 ~N~l~~~-----------------~p~~l~--~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~-~~~~~ 244 (729)
+|++++. +|..++ ++++|++|+|++|.+.+.+|..++++++|++|++++|+ +++ .+| .
T Consensus 215 ~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp-~ 293 (636)
T 4eco_A 215 NSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLK-D 293 (636)
T ss_dssp SCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHH-H
T ss_pred CCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccch-H
Confidence 9999975 899988 99999999999999999999999999999999999998 886 566 4
Q ss_pred hhccC------CCCCEEEcccccccccCCc--cccCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEccC
Q 046589 245 LFTNL------QSLSYLDVSNNLLSGNIPP--EISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGM 316 (729)
Q Consensus 245 ~~~~l------~~L~~L~Ls~N~l~~~~p~--~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~ 316 (729)
.+..+ ++|++|++++|+++ .+|. .++.+++|+.++++.|.++|.+| .+..+++ +..++++.
T Consensus 294 ~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~---------L~~L~L~~ 362 (636)
T 4eco_A 294 DWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIK---------LASLNLAY 362 (636)
T ss_dssp HHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEE---------ESEEECCS
T ss_pred HHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCC---------CCEEECCC
Confidence 45555 89999999999999 7888 89999999999999888887666 4433322 23344444
Q ss_pred CCCCCCcchhcCCCCC-CCEEEccCCcceecCCCCCcCCC--CCcEEEecCCCCCCCCccccc-------CCCCCcEEEc
Q 046589 317 NQLSGPLPSWLGKWNQ-MESVWLNNNQFIGRIPLEVGNCS--MLKYIRLSNNKLSGSIPRELN-------DSESLVEINL 386 (729)
Q Consensus 317 n~l~~~~p~~l~~l~~-L~~L~L~~n~l~~~~p~~l~~l~--~L~~L~Ls~N~l~~~~p~~~~-------~l~~L~~L~L 386 (729)
|.+. .+|.++..+++ |+.|++++|.+. .+|..+..++ +|++|++++|++++.+|..+. .+++|+.|++
T Consensus 363 N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~L 440 (636)
T 4eco_A 363 NQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINL 440 (636)
T ss_dssp SEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEEC
T ss_pred Cccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEEC
Confidence 4444 34444444444 555555555444 3444443332 445555555555444444444 3344444444
Q ss_pred CCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccC-C-------CCCCE
Q 046589 387 DGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGD-S-------TSLNI 458 (729)
Q Consensus 387 ~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-l-------~~L~~ 458 (729)
++|.++..++ ..+..+++|++|++++|+++ .+|..... . ++|+.
T Consensus 441 s~N~l~~lp~---------------------------~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~ 492 (636)
T 4eco_A 441 SNNQISKFPK---------------------------ELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTS 492 (636)
T ss_dssp CSSCCCSCCT---------------------------HHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCE
T ss_pred cCCccCcCCH---------------------------HHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccE
Confidence 4444443322 22333444455555554444 33322211 1 14455
Q ss_pred EEcccccCCccCchhhh--cCCCCCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecC------CCcCcccC
Q 046589 459 LELGNNNLNGSIPEKIA--DLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLS------YNMLSGPI 530 (729)
Q Consensus 459 L~Ls~N~l~~~~p~~l~--~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls------~N~l~g~~ 530 (729)
|+|++|+++ .+|..+. .+++|+.|++++|++++ +|..+. .+++|+.|+++ +|++.
T Consensus 493 L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~------------~l~~L~~L~Ls~N~~ls~N~l~--- 555 (636)
T 4eco_A 493 IDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPL------------NSSTLKGFGIRNQRDAQGNRTL--- 555 (636)
T ss_dssp EECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGG------------GCSSCCEEECCSCBCTTCCBCC---
T ss_pred EECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhh------------cCCCCCEEECCCCcccccCccc---
Confidence 555555554 3444443 44455555555555443 333222 33444445443 33333
Q ss_pred CchhhccccccccccccccccccCCceeeccCCcceeecccccccccccccccCCccccc
Q 046589 531 PKELGSCVVVLTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTNLDLSYNEFD 590 (729)
Q Consensus 531 p~~~~~~~~ll~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 590 (729)
+.+|..+..+++|++|+|++|++ +.+|..+. ++|+.|++++|++.
T Consensus 556 ------------~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 556 ------------REWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNI 600 (636)
T ss_dssp ------------CCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTC
T ss_pred ------------ccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCc
Confidence 34455556667777777777777 44555544 56777777777655
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3e-46 Score=431.10 Aligned_cols=452 Identities=20% Similarity=0.158 Sum_probs=307.0
Q ss_pred cCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEE
Q 046589 104 LLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLS 183 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 183 (729)
..+++++++++|.+.+..|..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..++.+++|++|+
T Consensus 55 l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 134 (606)
T 3vq2_A 55 FSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLN 134 (606)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEE
T ss_pred CccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEe
Confidence 56789999999999987788899999999999999999999999999999999999999999977778999999999999
Q ss_pred eeccCCCc-cCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCC----eeeccCCcCCCCCChhhhccCCCCCEEEcc
Q 046589 184 LCSNSFTG-EMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQ----DLDLSDNLLSGSLTVSLFTNLQSLSYLDVS 258 (729)
Q Consensus 184 Ls~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~----~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls 258 (729)
+++|.+++ .+|..|+++++|++|++++|++++..|..++.+.+|+ +|++++|.++ .++...+... +|+.|+++
T Consensus 135 L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~-~~~~~~~~~~-~L~~L~L~ 212 (606)
T 3vq2_A 135 VAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPID-FIQDQAFQGI-KLHELTLR 212 (606)
T ss_dssp CCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCC-EECTTTTTTC-EEEEEEEE
T ss_pred CCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcc-eeCcccccCc-eeeeeecc
Confidence 99999986 5799999999999999999999988888888877765 7999999998 5665666555 89999999
Q ss_pred ccccc-ccCCccccCCCcCCeecccc---------------------------------ccccccccccccCCCCccccc
Q 046589 259 NNLLS-GNIPPEISHLKKLSDHYLGI---------------------------------NQFTGSIQSELGNCKNFKSVL 304 (729)
Q Consensus 259 ~N~l~-~~~p~~l~~l~~L~~l~l~~---------------------------------n~l~~~~~~~l~~l~~l~~~l 304 (729)
+|.+. +..|..+..++.++.+.+.. +.+.+.++. +..+++
T Consensus 213 ~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~----- 286 (606)
T 3vq2_A 213 GNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLAN----- 286 (606)
T ss_dssp SCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTT-----
T ss_pred CCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCC-----
Confidence 99876 34455566666666555432 222222222 222222
Q ss_pred ccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEE
Q 046589 305 AELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEI 384 (729)
Q Consensus 305 ~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 384 (729)
+..++++.|.+. .+| ++..+++|++|++++|.+ +.+| .+ .+++|++|++++|+..+.+ .+..+++|+.|
T Consensus 287 ----L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L 355 (606)
T 3vq2_A 287 ----VSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYL 355 (606)
T ss_dssp ----CSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEE
T ss_pred ----CCEEEecCccch-hhh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEE
Confidence 344455555553 233 555556666666666665 4455 23 5556666666666433222 44455556666
Q ss_pred EcCCCCCCCCc--cccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccC-cCccCCCCCCEEEc
Q 046589 385 NLDGNMLSGTI--EDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIP-MRLGDSTSLNILEL 461 (729)
Q Consensus 385 ~L~~N~l~~~~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L 461 (729)
++++|.+++.. +..+ ..+++|++|++++|.+++ +|..+..+++|+.|++++|++.+..| ..+..+++|+.|++
T Consensus 356 ~ls~n~l~~~~~~~~~~---~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 431 (606)
T 3vq2_A 356 DLSRNALSFSGCCSYSD---LGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDI 431 (606)
T ss_dssp ECCSSCEEEEEECCHHH---HCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEEC
T ss_pred ECcCCccCCCcchhhhh---ccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEEC
Confidence 66665554431 2222 234455555555555553 34555555555555555555555444 34555555555555
Q ss_pred ccccCCccCchhhhcCCCCCEEeCCCCcCccc-ccccccccccccCCCCcccCCCCCeEecCCCcCcccCCchhhccccc
Q 046589 462 GNNNLNGSIPEKIADLAQLQFLDLSYNNLSRP-ILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVV 540 (729)
Q Consensus 462 s~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~l 540 (729)
++|++++..|..+..+++|++|++++|.+++. +|..+. .+++|+.|++++|++++..|..+..+..+
T Consensus 432 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~------------~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 499 (606)
T 3vq2_A 432 SYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFA------------NTTNLTFLDLSKCQLEQISWGVFDTLHRL 499 (606)
T ss_dssp TTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCT------------TCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred cCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhc------------cCCCCCEEECCCCcCCccChhhhcccccC
Confidence 55555555555555555555555555555542 222221 34455555555555555555444433222
Q ss_pred ---------cccccccccccccCCceeeccCCcceeeccccccccc-ccccccCCcccccC
Q 046589 541 ---------LTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLN-GLTNLDLSYNEFDG 591 (729)
Q Consensus 541 ---------l~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~g 591 (729)
+++.+|..+..+++|++|||++|+++. +|..+..++ +|+.|++++|++..
T Consensus 500 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c 559 (606)
T 3vq2_A 500 QLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVAC 559 (606)
T ss_dssp CEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCC
T ss_pred CEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCccc
Confidence 345667888999999999999999996 455588886 59999999999986
No 11
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.6e-46 Score=425.57 Aligned_cols=452 Identities=21% Similarity=0.186 Sum_probs=303.7
Q ss_pred cCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEE
Q 046589 104 LLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLS 183 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 183 (729)
..+++.+++++|.+++..+..+.++++|++|||++|+++++.+..|+++++|++|+|++|++++..|..|+++++|++|+
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 45688999999999987778899999999999999999999889999999999999999999988889999999999999
Q ss_pred eeccCCCccCCccccCCCCCcEEEccCCCCCC-CCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCC----CEEEcc
Q 046589 184 LCSNSFTGEMPSELGDMKQLKSLDFSGNGFNG-TVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSL----SYLDVS 258 (729)
Q Consensus 184 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L----~~L~Ls 258 (729)
+++|++++..+..++++++|++|++++|.+++ .+|..++++++|++|++++|.++ .++...+..+++| ..|+++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~~~~~L~l~ 185 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLS 185 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCC-EECGGGGHHHHTCTTCCCEEECT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccc-eecHHHccchhccchhhhhcccC
Confidence 99999997666689999999999999999986 47999999999999999999998 4555778888888 899999
Q ss_pred cccccccCCccccCCCcCCeecccccccccc-ccccccCCCCcc-----------------------cccccceeEEEEc
Q 046589 259 NNLLSGNIPPEISHLKKLSDHYLGINQFTGS-IQSELGNCKNFK-----------------------SVLAELQIFTFSA 314 (729)
Q Consensus 259 ~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~~-~~~~l~~l~~l~-----------------------~~l~~l~l~~l~l 314 (729)
+|.+++..|..+... +|+.++++.|..... ++..+..++.+. ..+..+.+..+++
T Consensus 186 ~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 264 (570)
T 2z63_A 186 LNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 264 (570)
T ss_dssp TCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEE
T ss_pred CCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhh
Confidence 999998888777665 788888877632211 111111111110 0111223344444
Q ss_pred cCC-CCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCccc-------------------
Q 046589 315 GMN-QLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRE------------------- 374 (729)
Q Consensus 315 ~~n-~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~------------------- 374 (729)
..+ .+.+..|..+..+++|+.|++++|.+. .+|..+..+ +|++|++++|++. .+|..
T Consensus 265 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 265 AYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPTLKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp EETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCBCBCSSCCEEEEESCBSCCBC
T ss_pred hcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCcccccccCEEeCcCCcccccc
Confidence 444 444555566666666666666666655 355555555 6666666666655 23321
Q ss_pred -ccCCCCCcEEEcCCCCCCCCc--cccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccC-cCc
Q 046589 375 -LNDSESLVEINLDGNMLSGTI--EDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIP-MRL 450 (729)
Q Consensus 375 -~~~l~~L~~L~L~~N~l~~~~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~ 450 (729)
...+++|+.|++++|.+++.. +.. +..+++|++|++++|.+++..+. +..+++|++|++++|.+.+..| ..+
T Consensus 342 ~~~~~~~L~~L~l~~n~l~~~~~~~~~---~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~ 417 (570)
T 2z63_A 342 SEVDLPSLEFLDLSRNGLSFKGCCSQS---DFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVF 417 (570)
T ss_dssp CCCBCTTCCEEECCSSCCBEEEEEEHH---HHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTT
T ss_pred ccccCCCCCEEeCcCCccCcccccccc---ccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhh
Confidence 033445555555555444321 111 12344455555555555533222 5555555555555555554433 344
Q ss_pred cCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCc-ccccccccccccccCCCCcccCCCCCeEecCCCcCccc
Q 046589 451 GDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLS-RPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGP 529 (729)
Q Consensus 451 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~-~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~ 529 (729)
..+++|++|++++|.+++..|..+..+++|+.|++++|.++ +.+|..+ ..+++|+.|++++|++++
T Consensus 418 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~------------~~l~~L~~L~l~~n~l~~- 484 (570)
T 2z63_A 418 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIF------------TELRNLTFLDLSQCQLEQ- 484 (570)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCC------------TTCTTCCEEECTTSCCCE-
T ss_pred hcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhh------------hcccCCCEEECCCCcccc-
Confidence 55555555555555555555555555555555555555554 2233222 244555555555555543
Q ss_pred CCchhhccccccccccccccccccCCceeeccCCcceeecccccccccccccccCCcccccC
Q 046589 530 IPKELGSCVVVLTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTNLDLSYNEFDG 591 (729)
Q Consensus 530 ~p~~~~~~~~ll~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 591 (729)
..|..|..+++|++|++++|++++.+|..|..+++|+.|++++|++++
T Consensus 485 --------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 532 (570)
T 2z63_A 485 --------------LSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 532 (570)
T ss_dssp --------------ECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred --------------CChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccC
Confidence 345666777888888888888888877778888888888888888876
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-45 Score=438.87 Aligned_cols=437 Identities=23% Similarity=0.206 Sum_probs=335.8
Q ss_pred cCCcEEEEcCCCCCcCcC-CccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCcc--ccCCCCCc
Q 046589 104 LLRVVYQVLRTQSLKGPV-SPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQ--LGVLTWLE 180 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~-~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~--l~~L~~L~ 180 (729)
+.++++|++++|...+.+ |..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++.+|.. ++.+++|+
T Consensus 47 l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~ 126 (844)
T 3j0a_A 47 LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT 126 (844)
T ss_dssp CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCC
T ss_pred cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCC
Confidence 577999999999877777 678999999999999999999999999999999999999999999877766 99999999
Q ss_pred EEEeeccCCCccCC-ccccCCCCCcEEEccCCCCCCCCccccCCC--CCCCeeeccCCcCCCCCChhhhccCC------C
Q 046589 181 TLSLCSNSFTGEMP-SELGDMKQLKSLDFSGNGFNGTVPIRLGEL--TRLQDLDLSDNLLSGSLTVSLFTNLQ------S 251 (729)
Q Consensus 181 ~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~~l~------~ 251 (729)
+|+|++|.+++..+ ..|+++++|++|+|++|.+++..|..++.+ ++|++|++++|.+.+..+ ..+..++ +
T Consensus 127 ~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~-~~~~~~~~~~~~~~ 205 (844)
T 3j0a_A 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVS-VDWGKCMNPFRNMV 205 (844)
T ss_dssp EEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCC-CCCCSSSCTTTTCC
T ss_pred EEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccc-cchhhcCCccccCc
Confidence 99999999987655 579999999999999999999999999888 899999999999987666 3344444 4
Q ss_pred CCEEEcccccccccCCccccCC--------------------------------------CcCCeecccccccccccccc
Q 046589 252 LSYLDVSNNLLSGNIPPEISHL--------------------------------------KKLSDHYLGINQFTGSIQSE 293 (729)
Q Consensus 252 L~~L~Ls~N~l~~~~p~~l~~l--------------------------------------~~L~~l~l~~n~l~~~~~~~ 293 (729)
|++|++++|.+++..|..+... .+|+.++++.|.+.+..+..
T Consensus 206 L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~ 285 (844)
T 3j0a_A 206 LEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRV 285 (844)
T ss_dssp BSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCC
T ss_pred eeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhh
Confidence 9999999999988777655432 46778888888887766666
Q ss_pred ccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcc
Q 046589 294 LGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPR 373 (729)
Q Consensus 294 l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 373 (729)
+..++++ ..++++.|.+.+..|..+..+++|++|++++|.+.+..|..+..+++|++|++++|++.+..+.
T Consensus 286 ~~~l~~L---------~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~ 356 (844)
T 3j0a_A 286 FETLKDL---------KVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQ 356 (844)
T ss_dssp SSSCCCC---------CEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSS
T ss_pred hhcCCCC---------CEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChh
Confidence 6666554 6788999999988899999999999999999999988899999999999999999999988888
Q ss_pred cccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcc----------------------cCCCCC
Q 046589 374 ELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKE----------------------IGNLRS 431 (729)
Q Consensus 374 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~----------------------l~~l~~ 431 (729)
.|..+++|+.|++++|.+++... +++|+.|++++|+++. +|.. +..+++
T Consensus 357 ~~~~l~~L~~L~Ls~N~l~~i~~--------~~~L~~L~l~~N~l~~-l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~ 427 (844)
T 3j0a_A 357 TFKFLEKLQTLDLRDNALTTIHF--------IPSIPDIFLSGNKLVT-LPKINLTANLIHLSENRLENLDILYFLLRVPH 427 (844)
T ss_dssp CSCSCCCCCEEEEETCCSCCCSS--------CCSCSEEEEESCCCCC-CCCCCTTCCEEECCSCCCCSSTTHHHHTTCTT
T ss_pred hhcCCCCCCEEECCCCCCCcccC--------CCCcchhccCCCCccc-ccccccccceeecccCccccCchhhhhhcCCc
Confidence 89999999999999999885422 4556667777776662 3332 234455
Q ss_pred CCEEEccCCccccccCc-CccCCCCCCEEEcccccCC-----ccCchhhhcCCCCCEEeCCCCcCccccccccccccccc
Q 046589 432 IQILKLNSNFFNGSIPM-RLGDSTSLNILELGNNNLN-----GSIPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEV 505 (729)
Q Consensus 432 L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~ 505 (729)
|++|++++|++++..+. .+..+++|+.|+|++|.++ +..+..|..+++|+.|||++|.+++..+..
T Consensus 428 L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-------- 499 (844)
T 3j0a_A 428 LQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGV-------- 499 (844)
T ss_dssp CCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTS--------
T ss_pred cceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhH--------
Confidence 55555555555432221 2233445555555555554 222334444555555555555554322222
Q ss_pred CCCCcccCCCCCeEecCCCcCcccCCchhhccccccccccccccccccCCceeeccCCcceeecccccccccccccccCC
Q 046589 506 NIPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVVLTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTNLDLS 585 (729)
Q Consensus 506 ~~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~ll~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 585 (729)
+..+++|+.||+++|++++. .|..+. ++|+.|||++|++++.+|..|. +|+.|+++
T Consensus 500 ----~~~l~~L~~L~Ls~N~l~~l---------------~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~ 555 (844)
T 3j0a_A 500 ----FSHLTALRGLSLNSNRLTVL---------------SHNDLP--ANLEILDISRNQLLAPNPDVFV---SLSVLDIT 555 (844)
T ss_dssp ----SSSCCSCSEEEEESCCCSSC---------------CCCCCC--SCCCEEEEEEECCCCCCSCCCS---SCCEEEEE
T ss_pred ----ccchhhhheeECCCCCCCcc---------------Chhhhh--ccccEEECCCCcCCCCChhHhC---CcCEEEec
Confidence 22455666666666666542 233333 7899999999999999998875 68899999
Q ss_pred cccccC
Q 046589 586 YNEFDG 591 (729)
Q Consensus 586 ~N~l~g 591 (729)
+|++..
T Consensus 556 ~Np~~C 561 (844)
T 3j0a_A 556 HNKFIC 561 (844)
T ss_dssp EECCCC
T ss_pred CCCccc
Confidence 999876
No 13
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.5e-45 Score=433.66 Aligned_cols=441 Identities=18% Similarity=0.213 Sum_probs=314.3
Q ss_pred ccccccchhHHHHHhcCCcEEEEcCCCCCcCcCCccCCCCCCCcEEEC-CCCCCCCCCccc-------------------
Q 046589 89 LGLAIANALKDLEELLLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNL-SQNLLFGQPSPQ------------------- 148 (729)
Q Consensus 89 ~~~~~~~~l~~l~~~~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~L-s~N~l~~~~~~~------------------- 148 (729)
.|+.|.. ..+|+.++|+++++.|.+|+.+++|++|++||| ++|.+.|..+-.
T Consensus 315 ~GV~C~~--------~~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~ 386 (876)
T 4ecn_A 315 PGVDLDN--------NGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMH 386 (876)
T ss_dssp TTEEECT--------TSCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTH
T ss_pred CceEecC--------CCCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHh
Confidence 6666653 367999999999999999999999999999999 888776542211
Q ss_pred ------------------------------c--cCCCCCCEEeccC--CcCcccCCccccCCCCCcEEEeeccCCCc---
Q 046589 149 ------------------------------V--SNLKRLKMLSLGE--NQLSGSLPSQLGVLTWLETLSLCSNSFTG--- 191 (729)
Q Consensus 149 ------------------------------~--~~l~~L~~L~Ls~--N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~--- 191 (729)
+ .....++.+.++. |++++ +|..|+++++|++|+|++|++++
T Consensus 387 ~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i 465 (876)
T 4ecn_A 387 YKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNI 465 (876)
T ss_dssp HHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGB
T ss_pred hhhhhhccCcchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcc
Confidence 0 1122344444443 88887 89999999999999999999998
Q ss_pred --------------cCCcccc--CCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCc-CCC-CCChhhhcc-----
Q 046589 192 --------------EMPSELG--DMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNL-LSG-SLTVSLFTN----- 248 (729)
Q Consensus 192 --------------~~p~~l~--~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~-~~~~~~~~~----- 248 (729)
.+|..++ ++++|++|+|++|.+.+.+|..++++++|++|+|++|+ +++ .+| ..+..
T Consensus 466 ~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP-~~i~~L~~~~ 544 (876)
T 4ecn_A 466 AVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLK-ADWTRLADDE 544 (876)
T ss_dssp SSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHH-HHHHHHHHCT
T ss_pred cccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccch-HHHHhhhhcc
Confidence 3888887 99999999999999999999999999999999999998 876 566 33444
Q ss_pred --CCCCCEEEcccccccccCCc--cccCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEccCCCCCCCcc
Q 046589 249 --LQSLSYLDVSNNLLSGNIPP--EISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLP 324 (729)
Q Consensus 249 --l~~L~~L~Ls~N~l~~~~p~--~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p 324 (729)
+++|++|++++|.++ .+|. .++.+++|+.++++.|.++ .+| .+..+++ +..++++.|.+. .+|
T Consensus 545 ~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~---------L~~L~Ls~N~l~-~lp 611 (876)
T 4ecn_A 545 DTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVK---------LTDLKLDYNQIE-EIP 611 (876)
T ss_dssp TTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSE---------ESEEECCSSCCS-CCC
T ss_pred cccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCc---------ceEEECcCCccc-cch
Confidence 459999999999999 7888 8999999999999999887 555 5544443 356677777777 677
Q ss_pred hhcCCCCC-CCEEEccCCcceecCCCCCcCCCC--CcEEEecCCCCCCCCcccc---c--CCCCCcEEEcCCCCCCCCcc
Q 046589 325 SWLGKWNQ-MESVWLNNNQFIGRIPLEVGNCSM--LKYIRLSNNKLSGSIPREL---N--DSESLVEINLDGNMLSGTIE 396 (729)
Q Consensus 325 ~~l~~l~~-L~~L~L~~n~l~~~~p~~l~~l~~--L~~L~Ls~N~l~~~~p~~~---~--~l~~L~~L~L~~N~l~~~~~ 396 (729)
.++..+++ |+.|++++|.+. .+|..+..++. |+.|+|++|++.+.+|... . .+++|+.|++++|.++..++
T Consensus 612 ~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~ 690 (876)
T 4ecn_A 612 EDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPT 690 (876)
T ss_dssp TTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCH
T ss_pred HHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCH
Confidence 77777777 777777777776 56666665543 7777777777776555322 2 23467777777777775443
Q ss_pred ccccccCCCCCCcEEEcCCCcCcccCCcccCC--------CCCCCEEEccCCccccccCcCcc--CCCCCCEEEcccccC
Q 046589 397 DVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGN--------LRSIQILKLNSNFFNGSIPMRLG--DSTSLNILELGNNNL 466 (729)
Q Consensus 397 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~--------l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l 466 (729)
..+ ..+++|+.|+|++|+++ .+|..+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++
T Consensus 691 ~~~---~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L 765 (876)
T 4ecn_A 691 ELF---ATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCF 765 (876)
T ss_dssp HHH---HTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCC
T ss_pred HHH---ccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCC
Confidence 333 24556777777777777 44443322 227777777777777 6676665 777777777777777
Q ss_pred CccCchhhhcCCCCCEEeCCC------CcCcccccccccccccccCCCCcccCCCCCeEecCCCcCcccCCchhhccccc
Q 046589 467 NGSIPEKIADLAQLQFLDLSY------NNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVV 540 (729)
Q Consensus 467 ~~~~p~~l~~l~~L~~LdLs~------N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~l 540 (729)
++ +|..+..+++|+.|+|++ |++.+.+|..+. .+++|+.|++++|++ +.+|.
T Consensus 766 ~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~------------~L~~L~~L~Ls~N~L-~~Ip~-------- 823 (876)
T 4ecn_A 766 SS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGIT------------TCPSLIQLQIGSNDI-RKVDE-------- 823 (876)
T ss_dssp SS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGG------------GCSSCCEEECCSSCC-CBCCS--------
T ss_pred Cc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHh------------cCCCCCEEECCCCCC-CccCH--------
Confidence 75 677777777777777765 455554444333 456666777777766 44433
Q ss_pred cccccccccccccCCceeeccCCcceeecccccccccccccccCCcccc
Q 046589 541 LTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTNLDLSYNEF 589 (729)
Q Consensus 541 l~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 589 (729)
.+. ++|+.|||++|++..+.+..|.....+..+.|++|.+
T Consensus 824 -------~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~ 863 (876)
T 4ecn_A 824 -------KLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKT 863 (876)
T ss_dssp -------CCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTT
T ss_pred -------hhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCc
Confidence 222 3566677777777666666665555555566666543
No 14
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.3e-45 Score=415.70 Aligned_cols=437 Identities=19% Similarity=0.209 Sum_probs=317.6
Q ss_pred EEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeecc
Q 046589 108 VYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSN 187 (729)
Q Consensus 108 ~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N 187 (729)
+.++++++.++ .+|..+. ++|++|+|++|.+++.++..|.++++|++|+|++|++++..|+.|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 46888999888 5777665 89999999999999888888999999999999999999888889999999999999999
Q ss_pred CCCccCCccccCCCCCcEEEccCCCCCC-CCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCC--CEEEcccccc--
Q 046589 188 SFTGEMPSELGDMKQLKSLDFSGNGFNG-TVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSL--SYLDVSNNLL-- 262 (729)
Q Consensus 188 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L--~~L~Ls~N~l-- 262 (729)
+++ .+|.. .+++|++|+|++|.+++ .+|..++++++|++|++++|.+++ ..+..+++| ++|++++|.+
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK----SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG----GGGGGGTTSCEEEEEEEECTTTT
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch----hhccccccceeeEEEeecccccc
Confidence 998 56665 88999999999999986 468889999999999999998874 456777788 9999999988
Q ss_pred cccCCccccCCCc-CCeeccccccccccccc-cccCCCCcccc--------------------cccc-eeEEEEccCCCC
Q 046589 263 SGNIPPEISHLKK-LSDHYLGINQFTGSIQS-ELGNCKNFKSV--------------------LAEL-QIFTFSAGMNQL 319 (729)
Q Consensus 263 ~~~~p~~l~~l~~-L~~l~l~~n~l~~~~~~-~l~~l~~l~~~--------------------l~~l-~l~~l~l~~n~l 319 (729)
.+..|..+..+.. ...++++.|.+.+.++. .+..++.+... +..+ .+..++++.|.+
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEE
T ss_pred cccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhcccccccc
Confidence 7777777766441 12234444444433322 11122211100 0000 022233333333
Q ss_pred CCCcchhcC---CCCCCCEEEccCCcceecCCCCC-----cCCCCCcEEEecCCCCCCCCc-ccccCC---CCCcEEEcC
Q 046589 320 SGPLPSWLG---KWNQMESVWLNNNQFIGRIPLEV-----GNCSMLKYIRLSNNKLSGSIP-RELNDS---ESLVEINLD 387 (729)
Q Consensus 320 ~~~~p~~l~---~l~~L~~L~L~~n~l~~~~p~~l-----~~l~~L~~L~Ls~N~l~~~~p-~~~~~l---~~L~~L~L~ 387 (729)
.+..+..+. ..++|++|++++|++.+.+|..+ ..+++|+.+++++|.+ .+| ..+..+ .+|+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~ 310 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVS 310 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEE
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcC
Confidence 221111110 13467778888888777777777 7777888888888877 344 444433 568888888
Q ss_pred CCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCcccc--ccCcCccCCCCCCEEEccccc
Q 046589 388 GNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNG--SIPMRLGDSTSLNILELGNNN 465 (729)
Q Consensus 388 ~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~ 465 (729)
+|.+..... ...+++|++|++++|++++.+|..+..+++|++|++++|++++ .+|..++.+++|++|++++|+
T Consensus 311 ~n~l~~~~~-----~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~ 385 (520)
T 2z7x_B 311 GTRMVHMLC-----PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNS 385 (520)
T ss_dssp SSCCCCCCC-----CSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSC
T ss_pred CCccccccc-----hhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCc
Confidence 887654321 1456778888888888887788888888888888888888875 456677888888888888888
Q ss_pred CCccCch-hhhcCCCCCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecCCCcCcccCCchhhccccccccc
Q 046589 466 LNGSIPE-KIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVVLTGY 544 (729)
Q Consensus 466 l~~~~p~-~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~ll~g~ 544 (729)
+++.+|. .+..+++|+.|++++|++++.+|... .++|+.||+++|+++ .
T Consensus 386 l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l--------------~~~L~~L~Ls~N~l~----------------~ 435 (520)
T 2z7x_B 386 VSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL--------------PPRIKVLDLHSNKIK----------------S 435 (520)
T ss_dssp CBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSC--------------CTTCCEEECCSSCCC----------------C
T ss_pred CCcccccchhccCccCCEEECcCCCCCcchhhhh--------------cccCCEEECCCCccc----------------c
Confidence 8875555 37777888888888888876544322 146788888888876 4
Q ss_pred cccccccccCCceeeccCCcceeecccccccccccccccCCcccccC
Q 046589 545 IPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTNLDLSYNEFDG 591 (729)
Q Consensus 545 ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 591 (729)
+|..+..+++|++|++++|+++.+.+..|..+++|++|++++|++++
T Consensus 436 ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c 482 (520)
T 2z7x_B 436 IPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 482 (520)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcc
Confidence 56666688999999999999997655569999999999999999987
No 15
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4.3e-45 Score=416.33 Aligned_cols=440 Identities=18% Similarity=0.170 Sum_probs=322.2
Q ss_pred CCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEe
Q 046589 105 LRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSL 184 (729)
Q Consensus 105 ~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L 184 (729)
.+++.+++++|.+++..|..+.++++|++|+|++|++++.++.+|+++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 46888999999988777788889999999999999998888888899999999999999998777777899999999999
Q ss_pred eccCCCc-cCCccccCCCCCcEEEccCCCCCCCCc-cccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccc
Q 046589 185 CSNSFTG-EMPSELGDMKQLKSLDFSGNGFNGTVP-IRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLL 262 (729)
Q Consensus 185 s~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l 262 (729)
++|.+++ ..|..++++++|++|++++|.+.+.+| ..++++++|++|++++|.+++.++ ..+..+++|++|++++|.+
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~n~~ 184 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQS-QSLKSIRDIHHLTLHLSES 184 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECT-TTTTTCSEEEEEEEECSBS
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccCh-hhhhccccCceEecccCcc
Confidence 9999886 356788899999999999998444454 678889999999999998886555 6778888999999998887
Q ss_pred cccCCccccCCCcCCeeccccccccccc--cccc-cCCCCcccccccceeEEEEccCCCCCCCcch----hcCCCCCCCE
Q 046589 263 SGNIPPEISHLKKLSDHYLGINQFTGSI--QSEL-GNCKNFKSVLAELQIFTFSAGMNQLSGPLPS----WLGKWNQMES 335 (729)
Q Consensus 263 ~~~~p~~l~~l~~L~~l~l~~n~l~~~~--~~~l-~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~----~l~~l~~L~~ 335 (729)
....+..+..+++|+.++++.|++++.. +..+ ..++. +..++++.|.+.+..+. .+..+++|+.
T Consensus 185 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~---------L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~ 255 (549)
T 2z81_A 185 AFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSP---------MKKLAFRGSVLTDESFNELLKLLRYILELSE 255 (549)
T ss_dssp TTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCC---------CCEEEEESCEEEHHHHHHHHGGGGGCTTCCE
T ss_pred cccchhhHhhcccccEEEccCCccccccccccchhhhhhc---------ccceeccccccchhHHHHHHHHhhhhccccc
Confidence 6332233456888999999999887642 1111 11111 22333333333322211 1223344444
Q ss_pred EEccCCcceecC-----------------------------------CCCCcCCCCCcEEEecCCCCCCCCcccc-cCCC
Q 046589 336 VWLNNNQFIGRI-----------------------------------PLEVGNCSMLKYIRLSNNKLSGSIPREL-NDSE 379 (729)
Q Consensus 336 L~L~~n~l~~~~-----------------------------------p~~l~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~ 379 (729)
+++++|.+.+.. +..+...++|++|++++|++. .+|..+ ..++
T Consensus 256 l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~ 334 (549)
T 2z81_A 256 VEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLK 334 (549)
T ss_dssp EEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCT
T ss_pred cccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCc
Confidence 444444443311 000112356788888888876 456555 5688
Q ss_pred CCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCC--cccCCCCCCCEEEccCCccccccCcCccCCCCCC
Q 046589 380 SLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIP--KEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLN 457 (729)
Q Consensus 380 ~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p--~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 457 (729)
+|++|++++|.+++..+.....+..+++|++|++++|++++..+ ..+..+++|++|++++|+++ .+|..+..+++|+
T Consensus 335 ~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~ 413 (549)
T 2z81_A 335 SLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMR 413 (549)
T ss_dssp TCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCC
T ss_pred cccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhccccccc
Confidence 88888888888876554333334567788888888888875432 45778888888888888887 6787888888888
Q ss_pred EEEcccccCCccCchhhhcCCCCCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecCCCcCcccCCchhhcc
Q 046589 458 ILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPIPKELGSC 537 (729)
Q Consensus 458 ~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~ 537 (729)
+|++++|+++ .+|..+ .++|++||+++|++++.+ ..+++|+.||+++|+++ .+|
T Consensus 414 ~L~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N~l~~~~----------------~~l~~L~~L~Ls~N~l~-~ip------ 467 (549)
T 2z81_A 414 FLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLDSFS----------------LFLPRLQELYISRNKLK-TLP------ 467 (549)
T ss_dssp EEECTTSCCS-CCCTTS--CTTCSEEECCSSCCSCCC----------------CCCTTCCEEECCSSCCS-SCC------
T ss_pred EEECCCCCcc-cccchh--cCCceEEECCCCChhhhc----------------ccCChhcEEECCCCccC-cCC------
Confidence 8888888887 344433 257888888888887521 14677889999999887 333
Q ss_pred ccccccccccccccccCCceeeccCCcceeecccccccccccccccCCcccccCC
Q 046589 538 VVVLTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTNLDLSYNEFDGN 592 (729)
Q Consensus 538 ~~ll~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 592 (729)
. ...+++|++|||++|++++.+|..|..+++|+.|++++|++.+.
T Consensus 468 ---------~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 468 ---------D-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp ---------C-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred ---------C-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 3 24578899999999999999999999999999999999999873
No 16
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.9e-45 Score=422.67 Aligned_cols=393 Identities=21% Similarity=0.312 Sum_probs=327.6
Q ss_pred CCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCc------c---------------------------cCCcccc-
Q 046589 129 SKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLS------G---------------------------SLPSQLG- 174 (729)
Q Consensus 129 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~------~---------------------------~~p~~l~- 174 (729)
.+++.|+|++|.+.|.+|++++++++|++|+|++|.+. + .+|..+.
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~ 160 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSD 160 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHH
Confidence 58999999999999999999999999999999999762 1 1111111
Q ss_pred ------------------CCCCCcEEEe--eccCCCccCCccccCCCCCcEEEccCCCCCCC-----------------C
Q 046589 175 ------------------VLTWLETLSL--CSNSFTGEMPSELGDMKQLKSLDFSGNGFNGT-----------------V 217 (729)
Q Consensus 175 ------------------~L~~L~~L~L--s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-----------------~ 217 (729)
....++.+++ .+|++++ +|..|+++++|++|+|++|.+++. +
T Consensus 161 ~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~i 239 (636)
T 4eco_A 161 LIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYK 239 (636)
T ss_dssp HHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccC
Confidence 0111222222 2678888 899999999999999999999985 9
Q ss_pred ccccC--CCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEccccc-ccc-cCCccccCC------CcCCeecccccccc
Q 046589 218 PIRLG--ELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNL-LSG-NIPPEISHL------KKLSDHYLGINQFT 287 (729)
Q Consensus 218 p~~l~--~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~-l~~-~~p~~l~~l------~~L~~l~l~~n~l~ 287 (729)
|..++ ++++|++|++++|.+.+.+| ..|.++++|++|++++|+ +++ .+|..++.+ ++|+.++++.|+++
T Consensus 240 p~~l~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 240 TEDLKWDNLKDLTDVEVYNCPNLTKLP-TFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TSCCCGGGCTTCCEEEEECCTTCSSCC-TTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred chhhhhcccCCCCEEEecCCcCCccCh-HHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 99999 99999999999999998888 778999999999999998 998 899988877 78888877776654
Q ss_pred ccccccccCCCCcccccccceeEEEEccCCCCCCCcch--hcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCC
Q 046589 288 GSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPS--WLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNN 365 (729)
Q Consensus 288 ~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~--~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N 365 (729)
.+|. .++.+++|+.|++++|++.|.+| .+..+++|++|++++|
T Consensus 319 ----------------------------------~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 319 ----------------------------------TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYN 363 (636)
T ss_dssp ----------------------------------SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSS
T ss_pred ----------------------------------ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCC
Confidence 3565 67888899999999999998999 8999999999999999
Q ss_pred CCCCCCcccccCCCC-CcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccC-------CCCCCCEEEc
Q 046589 366 KLSGSIPRELNDSES-LVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIG-------NLRSIQILKL 437 (729)
Q Consensus 366 ~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-------~l~~L~~L~L 437 (729)
+++ .+|..+..+++ |+.|++++|.++ .+|..+.. ..+++|++|++++|++++.+|..+. .+++|++|++
T Consensus 364 ~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~L 440 (636)
T 4eco_A 364 QIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDA-KSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINL 440 (636)
T ss_dssp EEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCT-TCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEEC
T ss_pred ccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhh-cccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEEC
Confidence 998 78888999999 999999999999 45555432 2345899999999999999999888 8899999999
Q ss_pred cCCccccccCcC-ccCCCCCCEEEcccccCCccCchh-hhcCC-------CCCEEeCCCCcCcccccccccccccccCCC
Q 046589 438 NSNFFNGSIPMR-LGDSTSLNILELGNNNLNGSIPEK-IADLA-------QLQFLDLSYNNLSRPILSKHSSYFHEVNIP 508 (729)
Q Consensus 438 ~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~-------~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~ 508 (729)
++|.++ .+|.. +..+++|+.|+|++|+++ .+|.. +.... +|+.|++++|+++ .+|.....
T Consensus 441 s~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~-------- 509 (636)
T 4eco_A 441 SNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRA-------- 509 (636)
T ss_dssp CSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGST--------
T ss_pred cCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhh--------
Confidence 999999 55544 556899999999999999 55554 33332 9999999999998 55544320
Q ss_pred CcccCCCCCeEecCCCcCcccCCchhhccccccccccccccccccCCceeec------cCCcceeecccccccccccccc
Q 046589 509 DLSYSHNYRKFDLSYNMLSGPIPKELGSCVVVLTGYIPRSLGHLSCSVKLNL------SGNKLSVLVPTSFGNLNGLTNL 582 (729)
Q Consensus 509 ~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~ll~g~ip~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L 582 (729)
..+++|+.|++++|++++ +|..+..+++|+.|+| ++|++.+.+|..|..+++|+.|
T Consensus 510 --~~l~~L~~L~Ls~N~l~~----------------ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L 571 (636)
T 4eco_A 510 --TTLPYLVGIDLSYNSFSK----------------FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQL 571 (636)
T ss_dssp --TTCTTCCEEECCSSCCSS----------------CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEE
T ss_pred --ccCCCcCEEECCCCCCCC----------------cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEE
Confidence 156789999999999974 4556678899999999 5688999999999999999999
Q ss_pred cCCccccc
Q 046589 583 DLSYNEFD 590 (729)
Q Consensus 583 ~Ls~N~l~ 590 (729)
++++|++.
T Consensus 572 ~Ls~N~l~ 579 (636)
T 4eco_A 572 QIGSNDIR 579 (636)
T ss_dssp ECCSSCCC
T ss_pred ECCCCcCC
Confidence 99999994
No 17
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.7e-44 Score=408.33 Aligned_cols=447 Identities=19% Similarity=0.183 Sum_probs=349.7
Q ss_pred EEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccC
Q 046589 109 YQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNS 188 (729)
Q Consensus 109 ~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~ 188 (729)
..+.++.+++ .+|..+. +++++|||++|.+++..+.+|.++++|++|+|++|++++..|..|+++++|++|+|++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 87 (570)
T 2z63_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (570)
T ss_dssp EEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCc
Confidence 3455555555 4565443 589999999999999999999999999999999999998888899999999999999999
Q ss_pred CCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCC-CCChhhhccCCCCCEEEcccccccccCC
Q 046589 189 FTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSG-SLTVSLFTNLQSLSYLDVSNNLLSGNIP 267 (729)
Q Consensus 189 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 267 (729)
+++..|..|.++++|++|++++|.+++..+..++++++|++|++++|.+++ .+| ..|.++++|++|++++|.+++..|
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp-~~~~~l~~L~~L~l~~n~l~~~~~ 166 (570)
T 2z63_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLP-EYFSNLTNLEHLDLSSNKIQSIYC 166 (570)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCC-GGGGGCTTCCEEECTTSCCCEECG
T ss_pred CCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecCh-hhhcccCCCCEEeCcCCccceecH
Confidence 998888999999999999999999997666689999999999999999985 345 678999999999999999998888
Q ss_pred ccccCCCcC----CeeccccccccccccccccCCCCcccccccceeEEEEccCCCCCC-Ccch-----------------
Q 046589 268 PEISHLKKL----SDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSG-PLPS----------------- 325 (729)
Q Consensus 268 ~~l~~l~~L----~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~-~~p~----------------- 325 (729)
..++.+++| ..++++.|.+++..+..+..+ .+..++++.|.... .++.
T Consensus 167 ~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~----------~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~ 236 (570)
T 2z63_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI----------RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGE 236 (570)
T ss_dssp GGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC----------EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEE
T ss_pred HHccchhccchhhhhcccCCCCceecCHHHhccC----------cceeEecccccccccchhhhhcCccccceeeecccc
Confidence 889888888 789999999987666554332 23444444332111 0111
Q ss_pred -------------hcCCCC--CCCEEEccCC-cceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCC
Q 046589 326 -------------WLGKWN--QMESVWLNNN-QFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGN 389 (729)
Q Consensus 326 -------------~l~~l~--~L~~L~L~~n-~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 389 (729)
.+..++ .++.+++.++ .+.+..|..+..+++|++|++++|.++ .+|..+..+ +|+.|++++|
T Consensus 237 ~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n 314 (570)
T 2z63_A 237 FRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNC 314 (570)
T ss_dssp CCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESC
T ss_pred ccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccC
Confidence 111111 2456677777 777888999999999999999999998 578888888 9999999999
Q ss_pred CCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCcccccc--CcCccCCCCCCEEEcccccCC
Q 046589 390 MLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSI--PMRLGDSTSLNILELGNNNLN 467 (729)
Q Consensus 390 ~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~ 467 (729)
.+...+. ..+++|++|++++|.+.+..+. ..+++|++|++++|.+++.. |..+..+++|+.|++++|.++
T Consensus 315 ~~~~l~~------~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~ 386 (570)
T 2z63_A 315 KFGQFPT------LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI 386 (570)
T ss_dssp BCSSCCB------CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEE
T ss_pred cccccCc------ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccc
Confidence 9984433 2456777888888877765554 67788888888888877543 566777788888888888877
Q ss_pred ccCchhhhcCCCCCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecCCCcCcccCCchhhccccc-------
Q 046589 468 GSIPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVV------- 540 (729)
Q Consensus 468 ~~~p~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~l------- 540 (729)
+..+. +..+++|+.|++++|.+++..+.. .+..+++|+.|++++|++.+.+|..+..+..+
T Consensus 387 ~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~-----------~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 454 (570)
T 2z63_A 387 TMSSN-FLGLEQLEHLDFQHSNLKQMSEFS-----------VFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAG 454 (570)
T ss_dssp EEEEE-EETCTTCCEEECTTSEEESCTTSC-----------TTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTT
T ss_pred ccccc-ccccCCCCEEEccCCccccccchh-----------hhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcC
Confidence 54444 777888888888888776533311 12355677777777777777666665544333
Q ss_pred --cc-cccccccccccCCceeeccCCcceeecccccccccccccccCCcccccC
Q 046589 541 --LT-GYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTNLDLSYNEFDG 591 (729)
Q Consensus 541 --l~-g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 591 (729)
++ +.+|..+..+++|++|++++|++++..|..|..+++|++|++++|++++
T Consensus 455 n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 508 (570)
T 2z63_A 455 NSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS 508 (570)
T ss_dssp CEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCC
Confidence 23 5688889999999999999999999999999999999999999999887
No 18
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.3e-44 Score=423.53 Aligned_cols=419 Identities=19% Similarity=0.237 Sum_probs=349.9
Q ss_pred CCCcEEECCCCCCCCCCcccccCCCCCCEEec-cCCcCcccCCccc----------------------------------
Q 046589 129 SKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSL-GENQLSGSLPSQL---------------------------------- 173 (729)
Q Consensus 129 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L-s~N~l~~~~p~~l---------------------------------- 173 (729)
.+++.|+|++|.+.|.+|++++++++|++|+| ++|.++|..|-..
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 58999999999999999999999999999999 9998876633221
Q ss_pred -----------------cCCCCCcEEEee--ccCCCccCCccccCCCCCcEEEccCCCCCC-----------------CC
Q 046589 174 -----------------GVLTWLETLSLC--SNSFTGEMPSELGDMKQLKSLDFSGNGFNG-----------------TV 217 (729)
Q Consensus 174 -----------------~~L~~L~~L~Ls--~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-----------------~~ 217 (729)
.....++.+.+. .|++++ +|..|+++++|++|+|++|.+++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 111223334443 388887 89999999999999999999998 38
Q ss_pred ccccC--CCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEccccc-ccc-cCCccccCCC-------cCCeeccccccc
Q 046589 218 PIRLG--ELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNL-LSG-NIPPEISHLK-------KLSDHYLGINQF 286 (729)
Q Consensus 218 p~~l~--~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~-l~~-~~p~~l~~l~-------~L~~l~l~~n~l 286 (729)
|..++ ++++|++|+|++|.+.+.+| ..|.++++|++|+|++|+ +++ .+|..++.+. +|+.++++.|.+
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP-~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L 560 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLP-DFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCC-GGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccCh-HHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcC
Confidence 99988 99999999999999998888 788999999999999998 998 7888777666 999999999999
Q ss_pred cccccc--cccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCC-CcEEEec
Q 046589 287 TGSIQS--ELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSM-LKYIRLS 363 (729)
Q Consensus 287 ~~~~~~--~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~-L~~L~Ls 363 (729)
+ .+|. .+..++++ ..++++.|.+. .+| .++.+++|+.|++++|++. .+|..+..+++ |++|+|+
T Consensus 561 ~-~ip~~~~l~~L~~L---------~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls 627 (876)
T 4ecn_A 561 E-EFPASASLQKMVKL---------GLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFS 627 (876)
T ss_dssp C-BCCCHHHHTTCTTC---------CEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECC
T ss_pred C-ccCChhhhhcCCCC---------CEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECc
Confidence 9 7777 77777665 67899999998 788 8999999999999999998 88888999999 9999999
Q ss_pred CCCCCCCCcccccCCCC--CcEEEcCCCCCCCCccccccccC--CCCCCcEEEcCCCcCcccCCcc-cCCCCCCCEEEcc
Q 046589 364 NNKLSGSIPRELNDSES--LVEINLDGNMLSGTIEDVFGRCT--NLSQLEKLDLSSNMLTGRIPKE-IGNLRSIQILKLN 438 (729)
Q Consensus 364 ~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~L~ 438 (729)
+|+++ .+|..+..+.. |+.|++++|.+.+.+|....... .+++|+.|+|++|+++. +|.. +..+++|+.|+|+
T Consensus 628 ~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~-lp~~~~~~l~~L~~L~Ls 705 (876)
T 4ecn_A 628 HNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQK-FPTELFATGSPISTIILS 705 (876)
T ss_dssp SSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCS-CCHHHHHTTCCCSEEECC
T ss_pred CCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCc-cCHHHHccCCCCCEEECC
Confidence 99999 68888877654 99999999999988776553333 24589999999999994 5654 4589999999999
Q ss_pred CCccccccCcCccCC--------CCCCEEEcccccCCccCchhhh--cCCCCCEEeCCCCcCcccccccccccccccCCC
Q 046589 439 SNFFNGSIPMRLGDS--------TSLNILELGNNNLNGSIPEKIA--DLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIP 508 (729)
Q Consensus 439 ~N~l~~~~p~~~~~l--------~~L~~L~Ls~N~l~~~~p~~l~--~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~ 508 (729)
+|+++ .+|..+... ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+.
T Consensus 706 ~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~--------- 773 (876)
T 4ecn_A 706 NNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPL--------- 773 (876)
T ss_dssp SCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGG---------
T ss_pred CCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhh---------
Confidence 99999 677655443 28999999999999 7888887 99999999999999987 555544
Q ss_pred CcccCCCCCeEecCCCcCcccCCchhhccccccccccccccccccCCceeeccCCcceeecccccccccccccccCCccc
Q 046589 509 DLSYSHNYRKFDLSYNMLSGPIPKELGSCVVVLTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTNLDLSYNE 588 (729)
Q Consensus 509 ~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~ll~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 588 (729)
.+++|+.|++++|+... ..-+.+.+|..+..+++|+.|+|++|++ +.+|..+. ++|+.|+|++|+
T Consensus 774 ---~L~~L~~L~Ls~N~~ls---------~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~ 838 (876)
T 4ecn_A 774 ---NSSQLKAFGIRHQRDAE---------GNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNP 838 (876)
T ss_dssp ---GCTTCCEEECCCCBCTT---------CCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCT
T ss_pred ---cCCCCCEEECCCCCCcc---------cccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCC
Confidence 67889999998854100 0112456777888999999999999999 67787765 599999999999
Q ss_pred ccC
Q 046589 589 FDG 591 (729)
Q Consensus 589 l~g 591 (729)
+..
T Consensus 839 l~~ 841 (876)
T 4ecn_A 839 NIS 841 (876)
T ss_dssp TCE
T ss_pred CCc
Confidence 864
No 19
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=5.5e-42 Score=391.56 Aligned_cols=436 Identities=20% Similarity=0.208 Sum_probs=331.6
Q ss_pred cEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeec
Q 046589 107 VVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCS 186 (729)
Q Consensus 107 ~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~ 186 (729)
.+.++++++++++ +|..+. ++|++|+|++|.+++.++.+|.++++|++|+|++|++++..|+.|+.+++|++|+|++
T Consensus 33 ~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 33 ESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 3689999999985 776654 8999999999999999999999999999999999999988899999999999999999
Q ss_pred cCCCccCCccccCCCCCcEEEccCCCCCC-CCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCC--CEEEcccccc-
Q 046589 187 NSFTGEMPSELGDMKQLKSLDFSGNGFNG-TVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSL--SYLDVSNNLL- 262 (729)
Q Consensus 187 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L--~~L~Ls~N~l- 262 (729)
|+++ .+|.. .+++|++|+|++|++++ ..|..|+++++|++|++++|.+++ . .+..+++| ++|++++|.+
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~-~---~~~~l~~L~L~~L~L~~n~l~ 182 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ-L---DLLPVAHLHLSCILLDLVSYH 182 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT-T---TTGGGTTSCEEEEEEEESSCC
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc-C---chhhhhhceeeEEEeeccccc
Confidence 9998 56766 89999999999999986 346899999999999999999974 2 34555666 9999999999
Q ss_pred -cccCCccccCCC--cCCeecccccccccccccc-ccCCCCcccc------------------------cccceeEEEEc
Q 046589 263 -SGNIPPEISHLK--KLSDHYLGINQFTGSIQSE-LGNCKNFKSV------------------------LAELQIFTFSA 314 (729)
Q Consensus 263 -~~~~p~~l~~l~--~L~~l~l~~n~l~~~~~~~-l~~l~~l~~~------------------------l~~l~l~~l~l 314 (729)
++..|..+..+. .+ .++++.|.+.+.++.. +..++.+... +..+.+...++
T Consensus 183 ~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l 261 (562)
T 3a79_B 183 IKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIET 261 (562)
T ss_dssp CCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEE
T ss_pred ccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcC
Confidence 778888777654 22 3345555555433321 1111111000 00111112222
Q ss_pred cCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCC-----cCCCCCcEEEecCCCCCCCCc-ccccC---CCCCcEEE
Q 046589 315 GMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEV-----GNCSMLKYIRLSNNKLSGSIP-RELND---SESLVEIN 385 (729)
Q Consensus 315 ~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l-----~~l~~L~~L~Ls~N~l~~~~p-~~~~~---l~~L~~L~ 385 (729)
+.+.+.+ ++..+. ..+|++|++++|.+.+.+|..+ ..++.|+.++++.|.+ .+| ..+.. ..+|+.|+
T Consensus 262 ~~~~~~~-~~~~~~-~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~ 337 (562)
T 3a79_B 262 TWKCSVK-LFQFFW-PRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLS 337 (562)
T ss_dssp CHHHHHH-HHHHHT-TSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEE
T ss_pred cHHHHHH-HHHhhh-cccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEE
Confidence 2221111 112221 2478888888888888888776 6677777777777776 344 22222 25789999
Q ss_pred cCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCcccc--ccCcCccCCCCCCEEEccc
Q 046589 386 LDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNG--SIPMRLGDSTSLNILELGN 463 (729)
Q Consensus 386 L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~ 463 (729)
+++|.+..... ...+++|++|++++|++++.+|..+.++++|++|++++|++++ .+|..+..+++|+.|++++
T Consensus 338 l~~n~~~~~~~-----~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~ 412 (562)
T 3a79_B 338 ISDTPFIHMVC-----PPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSL 412 (562)
T ss_dssp EESSCCCCCCC-----CSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTT
T ss_pred ccCCCcccccC-----ccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCC
Confidence 99998754321 1467789999999999998889999999999999999999986 3456788999999999999
Q ss_pred ccCCccCch-hhhcCCCCCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecCCCcCcccCCchhhccccccc
Q 046589 464 NNLNGSIPE-KIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVVLT 542 (729)
Q Consensus 464 N~l~~~~p~-~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~ll~ 542 (729)
|++++.+|. .+..+++|+.|++++|++++.+|... ..+|+.|++++|+++
T Consensus 413 N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l--------------~~~L~~L~L~~N~l~--------------- 463 (562)
T 3a79_B 413 NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCL--------------PPKVKVLDLHNNRIM--------------- 463 (562)
T ss_dssp SCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSC--------------CTTCSEEECCSSCCC---------------
T ss_pred CcCCCccChhhhcCcccCCEEECCCCCCCcchhhhh--------------cCcCCEEECCCCcCc---------------
Confidence 999984554 58888999999999999986544322 157899999999986
Q ss_pred cccccccccccCCceeeccCCcceeecccccccccccccccCCcccccCC
Q 046589 543 GYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTNLDLSYNEFDGN 592 (729)
Q Consensus 543 g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 592 (729)
.+|..+..+++|++|+|++|+++.+.+..|..+++|+.|++++|++.+.
T Consensus 464 -~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 464 -SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp -CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCC
T ss_pred -ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCC
Confidence 4566666899999999999999976555599999999999999999873
No 20
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=8.1e-42 Score=389.25 Aligned_cols=427 Identities=20% Similarity=0.213 Sum_probs=335.2
Q ss_pred cCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcc-cCCccccCCCCCcEE
Q 046589 104 LLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSG-SLPSQLGVLTWLETL 182 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~L~~L~~L 182 (729)
+.+++++++++|.+.+..|..+.++++|++|||++|.+++.++..|+++++|++|+|++|++++ ..|..++.+++|++|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 5679999999999998888899999999999999999999988889999999999999999986 467889999999999
Q ss_pred EeeccCCCccCC-ccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEccccc
Q 046589 183 SLCSNSFTGEMP-SELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNL 261 (729)
Q Consensus 183 ~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~ 261 (729)
++++|++.+.+| ..|.++++|++|++++|.+++..|..++.+++|++|+++.|.+. .++...+..+++|++|++++|+
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~ 207 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTN 207 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCB
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCc
Confidence 999999544554 68999999999999999999999999999999999999999986 6665666789999999999999
Q ss_pred ccccC--C-ccccCCCcCCeecccccccccccccccc----CCCCcccc--------------------cccce-eEEEE
Q 046589 262 LSGNI--P-PEISHLKKLSDHYLGINQFTGSIQSELG----NCKNFKSV--------------------LAELQ-IFTFS 313 (729)
Q Consensus 262 l~~~~--p-~~l~~l~~L~~l~l~~n~l~~~~~~~l~----~l~~l~~~--------------------l~~l~-l~~l~ 313 (729)
+++.. | .....+++|+.++++.|.+++..+..+. .++.+... +..+. +..+.
T Consensus 208 l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~ 287 (549)
T 2z81_A 208 LARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVT 287 (549)
T ss_dssp CTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEE
T ss_pred cccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhccccccc
Confidence 98742 2 2234567788888888877654433221 11111100 00000 22233
Q ss_pred ccCCCCCC-----CcchhcCCCCCCCEEEccCCcceecCCCCC-cCCCCCcEEEecCCCCCCCCcc---cccCCCCCcEE
Q 046589 314 AGMNQLSG-----PLPSWLGKWNQMESVWLNNNQFIGRIPLEV-GNCSMLKYIRLSNNKLSGSIPR---ELNDSESLVEI 384 (729)
Q Consensus 314 l~~n~l~~-----~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L 384 (729)
+..+.+.. .++.......+|+.|++++|.+. .+|..+ ..+++|++|++++|++++.+|. .+..+++|+.|
T Consensus 288 l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L 366 (549)
T 2z81_A 288 IRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTL 366 (549)
T ss_dssp EESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEE
T ss_pred ccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEE
Confidence 33332221 11112223467999999999986 566555 5789999999999999987653 47789999999
Q ss_pred EcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccc
Q 046589 385 NLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNN 464 (729)
Q Consensus 385 ~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 464 (729)
++++|++++..+. -..+..+++|++|++++|+++ .+|..+..+++|++|++++|.++ .+|..+ .++|++|+|++|
T Consensus 367 ~Ls~N~l~~~~~~-~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N 441 (549)
T 2z81_A 367 VLSQNHLRSMQKT-GEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNN 441 (549)
T ss_dssp ECTTSCCCCHHHH-HHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTS--CTTCSEEECCSS
T ss_pred EccCCcccccccc-hhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchh--cCCceEEECCCC
Confidence 9999999875431 012356788999999999999 58889999999999999999998 455444 368999999999
Q ss_pred cCCccCchhhhcCCCCCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecCCCcCcccCCchhhccccccccc
Q 046589 465 NLNGSIPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVVLTGY 544 (729)
Q Consensus 465 ~l~~~~p~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~ll~g~ 544 (729)
++++.+ ..+++|++||+++|+++ .+|.. ..+++|+.||+++|++++.
T Consensus 442 ~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~~-------------~~l~~L~~L~Ls~N~l~~~--------------- 488 (549)
T 2z81_A 442 NLDSFS----LFLPRLQELYISRNKLK-TLPDA-------------SLFPVLLVMKISRNQLKSV--------------- 488 (549)
T ss_dssp CCSCCC----CCCTTCCEEECCSSCCS-SCCCG-------------GGCTTCCEEECCSSCCCCC---------------
T ss_pred Chhhhc----ccCChhcEEECCCCccC-cCCCc-------------ccCccCCEEecCCCccCCc---------------
Confidence 999754 57899999999999998 44431 2467899999999999753
Q ss_pred cccccccccCCceeeccCCcceeecc
Q 046589 545 IPRSLGHLSCSVKLNLSGNKLSVLVP 570 (729)
Q Consensus 545 ip~~~~~l~~L~~L~Ls~N~l~~~~p 570 (729)
+|..+..+++|+.|++++|.+.+..|
T Consensus 489 ~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 489 PDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CHHHHhcCcccCEEEecCCCccCCCc
Confidence 34456778999999999999988766
No 21
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.3e-42 Score=388.11 Aligned_cols=420 Identities=18% Similarity=0.208 Sum_probs=318.1
Q ss_pred CCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEe
Q 046589 105 LRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSL 184 (729)
Q Consensus 105 ~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L 184 (729)
.+++++++++|.+.+..|..+.++++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 45788999999988776678888999999999999998888888999999999999999988 56666 7889999999
Q ss_pred eccCCCc-cCCccccCCCCCcEEEccCCCCCCCCccccCCCCCC--CeeeccCCcC--CCCCChhhhccCC-CCCEEEcc
Q 046589 185 CSNSFTG-EMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRL--QDLDLSDNLL--SGSLTVSLFTNLQ-SLSYLDVS 258 (729)
Q Consensus 185 s~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L--~~L~L~~N~l--~~~~~~~~~~~l~-~L~~L~Ls 258 (729)
++|++++ .+|..|+++++|++|++++|.+++ ..+..+++| ++|++++|.+ .+..+ ..+..+. +...++++
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~-~~l~~l~~~~l~l~l~ 173 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDP-EGLQDFNTESLHIVFP 173 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCT-TTTTTCCEEEEEEECC
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccccccc-ccccccccceEEEEec
Confidence 9999986 478889999999999999998875 456667777 8899988888 54444 3344332 12234444
Q ss_pred cccccccCC-ccccCCCcCCeecccccc-------ccccccccccCCCCcccc------------------cccceeEEE
Q 046589 259 NNLLSGNIP-PEISHLKKLSDHYLGINQ-------FTGSIQSELGNCKNFKSV------------------LAELQIFTF 312 (729)
Q Consensus 259 ~N~l~~~~p-~~l~~l~~L~~l~l~~n~-------l~~~~~~~l~~l~~l~~~------------------l~~l~l~~l 312 (729)
+|.+.+.++ ..+..+++|+.++++.|. +.+.++ .+..++++... .....+..+
T Consensus 174 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L 252 (520)
T 2z7x_B 174 TNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYF 252 (520)
T ss_dssp SSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEE
T ss_pred cCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEE
Confidence 554443333 233444455555554443 333222 22222222210 001135678
Q ss_pred EccCCCCCCCcchhc-----CCCCCCCEEEccCCcceecCC-CCCcCC---CCCcEEEecCCCCCCCCcccccCCCCCcE
Q 046589 313 SAGMNQLSGPLPSWL-----GKWNQMESVWLNNNQFIGRIP-LEVGNC---SMLKYIRLSNNKLSGSIPRELNDSESLVE 383 (729)
Q Consensus 313 ~l~~n~l~~~~p~~l-----~~l~~L~~L~L~~n~l~~~~p-~~l~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 383 (729)
+++.|.+.|.+|.++ +.+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|++.... .+..+++|++
T Consensus 253 ~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~ 328 (520)
T 2z7x_B 253 SISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLH 328 (520)
T ss_dssp EEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCE
T ss_pred EeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccE
Confidence 888899998999988 8899999999999998 455 233333 57999999999986432 1267899999
Q ss_pred EEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcc--cCCcccCCCCCCCEEEccCCccccccCcC-ccCCCCCCEEE
Q 046589 384 INLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTG--RIPKEIGNLRSIQILKLNSNFFNGSIPMR-LGDSTSLNILE 460 (729)
Q Consensus 384 L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~ 460 (729)
|++++|.+++..+..+ ..+++|++|++++|++++ .+|..+..+++|++|++++|.+++.+|.. +..+++|+.|+
T Consensus 329 L~Ls~n~l~~~~~~~~---~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~ 405 (520)
T 2z7x_B 329 LDFSNNLLTDTVFENC---GHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLN 405 (520)
T ss_dssp EECCSSCCCTTTTTTC---CCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEE
T ss_pred EEeECCccChhhhhhh---ccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEE
Confidence 9999999998777655 567889999999999997 56788999999999999999999867754 78899999999
Q ss_pred cccccCCccCchhhhcCCCCCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecCCCcCcccCCchhhccccc
Q 046589 461 LGNNNLNGSIPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVV 540 (729)
Q Consensus 461 Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~l 540 (729)
+++|++++..|..+. ++|+.||+++|+++ .+|.... .+++|+.|++++|+++.
T Consensus 406 Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~------------~l~~L~~L~L~~N~l~~------------ 458 (520)
T 2z7x_B 406 MSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVV------------KLEALQELNVASNQLKS------------ 458 (520)
T ss_dssp CCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGG------------GCTTCCEEECCSSCCCC------------
T ss_pred CcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhh------------cCCCCCEEECCCCcCCc------------
Confidence 999999988887664 78999999999998 5555443 67889999999999972
Q ss_pred cccccccc-cccccCCceeeccCCcceeecc
Q 046589 541 LTGYIPRS-LGHLSCSVKLNLSGNKLSVLVP 570 (729)
Q Consensus 541 l~g~ip~~-~~~l~~L~~L~Ls~N~l~~~~p 570 (729)
+|.. +..+++|++|++++|++++..+
T Consensus 459 ----l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 459 ----VPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp ----CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ----cCHHHhccCCcccEEECcCCCCcccCC
Confidence 3333 6778999999999999998654
No 22
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.2e-39 Score=375.31 Aligned_cols=453 Identities=21% Similarity=0.196 Sum_probs=289.1
Q ss_pred cCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEE
Q 046589 104 LLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLS 183 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 183 (729)
+..+++|+|++|.+++..+..+.++++|++|||++|+|+++++.+|.++++|++|+|++|+|++..+..|.++++|++|+
T Consensus 51 p~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 51 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred CcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 45678888888888865566788888888888888888888888888888888888888888866667788888888888
Q ss_pred eeccCCCccCCccccCCCCCcEEEccCCCCCC-CCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCC----CEEEcc
Q 046589 184 LCSNSFTGEMPSELGDMKQLKSLDFSGNGFNG-TVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSL----SYLDVS 258 (729)
Q Consensus 184 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L----~~L~Ls 258 (729)
|++|++++..+..|+++++|++|+|++|.++. ..|..++.+++|++|++++|++++ ++...|..+.++ ..++++
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~l~~L~~l~~~~~~~~ls 209 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS-IYCTDLRVLHQMPLLNLSLDLS 209 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE-ECGGGGHHHHTCTTCCCEEECT
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccc-cccccccchhhhhhhhhhhhcc
Confidence 88888887767778888888888888888865 357778888888888888888874 444555554443 367788
Q ss_pred cccccccCCccccCCCcCCeecccccccccccc-ccccCCCCcc-----------------------ccccccee-----
Q 046589 259 NNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQ-SELGNCKNFK-----------------------SVLAELQI----- 309 (729)
Q Consensus 259 ~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~~-~~l~~l~~l~-----------------------~~l~~l~l----- 309 (729)
.|.+....+..+.. ..+..+.+..|.....+. ..+..+..+. .....+..
T Consensus 210 ~n~l~~i~~~~~~~-~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~ 288 (635)
T 4g8a_A 210 LNPMNFIQPGAFKE-IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 288 (635)
T ss_dssp TCCCCEECTTTTTT-CEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEE
T ss_pred cCcccccCcccccc-hhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhh
Confidence 88877554444333 233444444442221100 0000000000 00000111
Q ss_pred --------------------EEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCC-------------------C
Q 046589 310 --------------------FTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPL-------------------E 350 (729)
Q Consensus 310 --------------------~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~-------------------~ 350 (729)
..+....+.+.. ...+.....++.|++.+|.+.+..+. .
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~--~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~ 366 (635)
T 4g8a_A 289 AYLDYYLDGIIDLFNCLTNVSSFSLVSVTIER--VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFS 366 (635)
T ss_dssp ECCCSCEEECTTTTGGGTTCSEEEEESCEEEE--CGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCC
T ss_pred hhhcccccchhhhhhhhccccccccccccccc--ccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcc
Confidence 111111111110 11222334556666666655432221 1
Q ss_pred CcCCCCCcEEEecCCCCCC--CCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCC-cccC
Q 046589 351 VGNCSMLKYIRLSNNKLSG--SIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIP-KEIG 427 (729)
Q Consensus 351 l~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~ 427 (729)
...+++|+.|++++|.+.. ..+..+..+.+|+.+++..|...... ..+..+++|+.++++.|+.....+ ..+.
T Consensus 367 ~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~----~~~~~l~~L~~l~l~~~~~~~~~~~~~~~ 442 (635)
T 4g8a_A 367 EVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMS----SNFLGLEQLEHLDFQHSNLKQMSEFSVFL 442 (635)
T ss_dssp CCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEEC----SCCTTCTTCCEEECTTSEEESTTSSCTTT
T ss_pred cccccccccchhhccccccccccccchhhhhhhhhhhcccccccccc----ccccccccccchhhhhccccccccccccc
Confidence 2233445555555554432 12333344445555555544433221 122345667777777766554433 4567
Q ss_pred CCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccC-CccCchhhhcCCCCCEEeCCCCcCcccccccccccccccC
Q 046589 428 NLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNL-NGSIPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVN 506 (729)
Q Consensus 428 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~ 506 (729)
.+++++.++++.|.+.+..+..+..+++|+.|+|++|++ .+..|..|..+++|++|||++|++++..|..+.
T Consensus 443 ~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~------- 515 (635)
T 4g8a_A 443 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN------- 515 (635)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT-------
T ss_pred cccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHc-------
Confidence 777788888888887777777777777888888887764 334667777778888888888887765444333
Q ss_pred CCCcccCCCCCeEecCCCcCcccCCchhhccccccccccccccccccCCceeeccCCcceeecccccccc-cccccccCC
Q 046589 507 IPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVVLTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNL-NGLTNLDLS 585 (729)
Q Consensus 507 ~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~ll~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls 585 (729)
.+++|+.|+|++|++++ ..|..|..+++|++|||++|+|++.+|..|..+ ++|++|+|+
T Consensus 516 -----~l~~L~~L~Ls~N~l~~---------------l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~ 575 (635)
T 4g8a_A 516 -----SLSSLQVLNMSHNNFFS---------------LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLT 575 (635)
T ss_dssp -----TCTTCCEEECTTSCCCB---------------CCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECT
T ss_pred -----CCCCCCEEECCCCcCCC---------------CChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEee
Confidence 56677888888887764 345567788899999999999999999988887 689999999
Q ss_pred cccccC
Q 046589 586 YNEFDG 591 (729)
Q Consensus 586 ~N~l~g 591 (729)
+|+|.-
T Consensus 576 ~Np~~C 581 (635)
T 4g8a_A 576 QNDFAC 581 (635)
T ss_dssp TCCBCC
T ss_pred CCCCcc
Confidence 998875
No 23
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=8.6e-40 Score=363.57 Aligned_cols=375 Identities=21% Similarity=0.232 Sum_probs=238.1
Q ss_pred EEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccC-CccccCCCCCcEEEeeccC
Q 046589 110 QVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSL-PSQLGVLTWLETLSLCSNS 188 (729)
Q Consensus 110 l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~L~~L~~L~Ls~N~ 188 (729)
.+.+++.++ .+|. + .++|++|||++|.+++..+..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|+
T Consensus 15 ~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~ 90 (455)
T 3v47_A 15 AICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQ 90 (455)
T ss_dssp EECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCT
T ss_pred cCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCc
Confidence 455555555 3454 2 268889999999888888888888889999999988886544 5678888889999999998
Q ss_pred CCccCCccccCCCCCcEEEccCCCCCCCCccc--cCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccC
Q 046589 189 FTGEMPSELGDMKQLKSLDFSGNGFNGTVPIR--LGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNI 266 (729)
Q Consensus 189 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 266 (729)
+++..|..|+++++|++|+|++|.+++..|.. ++.+++|++|++++|.+++..+...+..+++|++|++++|.+++..
T Consensus 91 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 170 (455)
T 3v47_A 91 FLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSIC 170 (455)
T ss_dssp TCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCC
T ss_pred cCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccC
Confidence 88888888888899999999998888655554 8888889999999888886556555788888999999998888887
Q ss_pred CccccCC--CcCCeecccccccccccccccc--CCCCcccccccceeEEEEccCCCCCCCcchhcCCC---CCCCEEEcc
Q 046589 267 PPEISHL--KKLSDHYLGINQFTGSIQSELG--NCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKW---NQMESVWLN 339 (729)
Q Consensus 267 p~~l~~l--~~L~~l~l~~n~l~~~~~~~l~--~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l---~~L~~L~L~ 339 (729)
|..+..+ .+|+.++++.|.+.+..+..+. .+.. ......+..++++.|.+.+..|..+... .+|+.|+++
T Consensus 171 ~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~---~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~ 247 (455)
T 3v47_A 171 EEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGN---PFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILS 247 (455)
T ss_dssp TTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCC---TTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECT
T ss_pred hhhhhccccccccccccccCcccccchhhcccccccc---ccccceeeeEecCCCcccccchhhhhccccccceeeEeec
Confidence 8777766 6777888888877654332211 0000 0011124566666666666555554432 566666666
Q ss_pred CCcceecC----------CCCCcC--CCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCC
Q 046589 340 NNQFIGRI----------PLEVGN--CSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQ 407 (729)
Q Consensus 340 ~n~l~~~~----------p~~l~~--l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~ 407 (729)
+|.+.+.. +..+.. .++|++|++++|++++.+|..+..+++|++|++++|.+++..+..| ..+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~---~~l~~ 324 (455)
T 3v47_A 248 NSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAF---WGLTH 324 (455)
T ss_dssp TCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTT---TTCTT
T ss_pred cccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHh---cCccc
Confidence 66543221 111111 1345555555555555555555555555555555555554444333 23444
Q ss_pred CcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCC
Q 046589 408 LEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSY 487 (729)
Q Consensus 408 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~ 487 (729)
|++|+|++|.+++..|..+.++++|++|++++|++++..|..+..+++|++|+|++|++++..+..+..+++|+.|++++
T Consensus 325 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 404 (455)
T 3v47_A 325 LLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHT 404 (455)
T ss_dssp CCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccC
Confidence 55555555555554455555555555555555555554455555555555555555555544444445555555555555
Q ss_pred CcCcccc
Q 046589 488 NNLSRPI 494 (729)
Q Consensus 488 N~l~~~~ 494 (729)
|++++..
T Consensus 405 N~l~~~~ 411 (455)
T 3v47_A 405 NPWDCSC 411 (455)
T ss_dssp SCBCCCT
T ss_pred CCcccCC
Confidence 5555433
No 24
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3e-39 Score=359.13 Aligned_cols=382 Identities=19% Similarity=0.184 Sum_probs=254.4
Q ss_pred CcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccC-CccccCCCCCcEEEcc
Q 046589 131 LRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEM-PSELGDMKQLKSLDFS 209 (729)
Q Consensus 131 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~Ls 209 (729)
-+.++.+++.++..+. + .++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|+
T Consensus 12 ~~~~~c~~~~l~~lp~--l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 12 GYNAICINRGLHQVPE--L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp TTEEECCSSCCSSCCC--C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred ccccCcCCCCcccCCC--C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 3567888888877654 2 368999999999999888999999999999999999997544 6789999999999999
Q ss_pred CCCCCCCCccccCCCCCCCeeeccCCcCCCCCC-hhhhccCCCCCEEEcccccccccCCcc-ccCCCcCCeecccccccc
Q 046589 210 GNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLT-VSLFTNLQSLSYLDVSNNLLSGNIPPE-ISHLKKLSDHYLGINQFT 287 (729)
Q Consensus 210 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~l~l~~n~l~ 287 (729)
+|.+++..|..|+++++|++|++++|.+++.++ ...|..+++|++|++++|.+++..|.. +..+++|+.++++.|.++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 88 YNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp TCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred CCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 999998889999999999999999999985433 234889999999999999999887876 889999999999999988
Q ss_pred ccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCC
Q 046589 288 GSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKL 367 (729)
Q Consensus 288 ~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 367 (729)
+..+..+..+.. ..+..++++.|.+.+..+.+++. ..+..+..+++|++|++++|++
T Consensus 168 ~~~~~~l~~l~~-------~~L~~L~l~~n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l 224 (455)
T 3v47_A 168 SICEEDLLNFQG-------KHFTLLRLSSITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGF 224 (455)
T ss_dssp CCCTTTSGGGTT-------CEEEEEECTTCBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCC
T ss_pred ccChhhhhcccc-------ccccccccccCcccccchhhccc----------------cccccccccceeeeEecCCCcc
Confidence 766655543321 12344444444444322221110 0001123445677777777777
Q ss_pred CCCCcccccCC---CCCcEEEcCCCCCCCC----------ccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCE
Q 046589 368 SGSIPRELNDS---ESLVEINLDGNMLSGT----------IEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQI 434 (729)
Q Consensus 368 ~~~~p~~~~~l---~~L~~L~L~~N~l~~~----------~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 434 (729)
++..|..+... .+|+.|++++|.+.+. .+..+..+ ..++|++|++++|.+++..|..+..+++|++
T Consensus 225 ~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 303 (455)
T 3v47_A 225 KESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGL-EASGVKTCDLSKSKIFALLKSVFSHFTDLEQ 303 (455)
T ss_dssp CHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGG-TTSCCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred cccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccc-cccCceEEEecCccccccchhhcccCCCCCE
Confidence 66666555433 5666677766654332 11111111 1245666666666666555666666666666
Q ss_pred EEccCCccccccCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCcccccccccccccccCCCCcccCC
Q 046589 435 LKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSH 514 (729)
Q Consensus 435 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~ 514 (729)
|++++|.+++..|..+..+++|+.|+|++|++++..|..+..+++|++||+++|++++..
T Consensus 304 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-------------------- 363 (455)
T 3v47_A 304 LTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALG-------------------- 363 (455)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEEC--------------------
T ss_pred EECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccC--------------------
Confidence 666666666555556666666666666666665555555666666666666666554322
Q ss_pred CCCeEecCCCcCcccCCchhhccccccccccccccccccCCceeeccCCcceeecccccccccccccccCCcccccC
Q 046589 515 NYRKFDLSYNMLSGPIPKELGSCVVVLTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTNLDLSYNEFDG 591 (729)
Q Consensus 515 ~l~~ldls~N~l~g~~p~~~~~~~~ll~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 591 (729)
|..|..+++|++|+|++|++++..+..|..+++|+.|++++|++++
T Consensus 364 -------------------------------~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 409 (455)
T 3v47_A 364 -------------------------------DQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 409 (455)
T ss_dssp -------------------------------TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred -------------------------------hhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCccc
Confidence 3334445555556666666655555555556666666666666554
No 25
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.7e-38 Score=365.12 Aligned_cols=429 Identities=21% Similarity=0.193 Sum_probs=316.0
Q ss_pred cCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEE
Q 046589 104 LLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLS 183 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 183 (729)
+.++++|+|++|.+++..+..+.++++|++|+|++|++++.++..|.++++|++|+|++|++++..+..|+++++|++|+
T Consensus 75 l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~ 154 (635)
T 4g8a_A 75 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 154 (635)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeec
Confidence 67799999999999976667899999999999999999999999999999999999999999977777899999999999
Q ss_pred eeccCCCc-cCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCC----eeeccCCcCCCCCChhhhccCCCCCEEEcc
Q 046589 184 LCSNSFTG-EMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQ----DLDLSDNLLSGSLTVSLFTNLQSLSYLDVS 258 (729)
Q Consensus 184 Ls~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~----~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls 258 (729)
|++|.+++ .+|..+..+++|++|++++|++++..|..+..+.+++ .++++.|.++ .++...+. ...+..++++
T Consensus 155 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~-~i~~~~~~-~~~~~~l~l~ 232 (635)
T 4g8a_A 155 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFK-EIRLHKLTLR 232 (635)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCC-EECTTTTT-TCEEEEEEEE
T ss_pred cccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCccc-ccCccccc-chhhhhhhhh
Confidence 99999975 4688899999999999999999988888887765544 6788888886 34433332 2234455555
Q ss_pred cccccccC-CccccCCCcC---------------------------------------------------------Ceec
Q 046589 259 NNLLSGNI-PPEISHLKKL---------------------------------------------------------SDHY 280 (729)
Q Consensus 259 ~N~l~~~~-p~~l~~l~~L---------------------------------------------------------~~l~ 280 (729)
+|...... +..+..+..+ ..+.
T Consensus 233 ~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~ 312 (635)
T 4g8a_A 233 NNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFS 312 (635)
T ss_dssp SCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEE
T ss_pred cccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccc
Confidence 54322110 0111111111 1111
Q ss_pred cccccccccccccccCCCCcccc------------cccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCccee--c
Q 046589 281 LGINQFTGSIQSELGNCKNFKSV------------LAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIG--R 346 (729)
Q Consensus 281 l~~n~l~~~~~~~l~~l~~l~~~------------l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~--~ 346 (729)
+..+.+.... .+..+..+... .....+..+.+..|.... +.....+++|+.+++++|.+.. .
T Consensus 313 ~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~--~~~~~~l~~L~~L~ls~n~l~~~~~ 388 (635)
T 4g8a_A 313 LVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGN--AFSEVDLPSLEFLDLSRNGLSFKGC 388 (635)
T ss_dssp EESCEEEECG--GGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCC--BCCCCBCTTCCEEECCSSCCBEEEE
T ss_pred cccccccccc--ccccchhhhhhhcccccccCcCcccchhhhhcccccccCCC--Ccccccccccccchhhccccccccc
Confidence 1111111000 00000000000 000001222333333222 2233457899999999998853 3
Q ss_pred CCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCccc
Q 046589 347 IPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEI 426 (729)
Q Consensus 347 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l 426 (729)
.+..+..+.+|++|+++.|.+.. .+..+..+++|+.+++..|......+.. .+..+++++.+++++|.+.+..+..+
T Consensus 389 ~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~--~~~~l~~l~~l~ls~n~l~~~~~~~~ 465 (635)
T 4g8a_A 389 CSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFS--VFLSLRNLIYLDISHTHTRVAFNGIF 465 (635)
T ss_dssp CCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSC--TTTTCTTCCEEECTTSCCEECCTTTT
T ss_pred cccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccc--cccccccccccccccccccccccccc
Confidence 45556677899999999999874 5567888999999999998877655432 24667889999999999999999999
Q ss_pred CCCCCCCEEEccCCccc-cccCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCccccccccccccccc
Q 046589 427 GNLRSIQILKLNSNFFN-GSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEV 505 (729)
Q Consensus 427 ~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~ 505 (729)
..+++|++|++++|.+. +..|..+..+++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..+.
T Consensus 466 ~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~------ 539 (635)
T 4g8a_A 466 NGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYK------ 539 (635)
T ss_dssp TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGT------
T ss_pred ccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHh------
Confidence 99999999999999854 45788999999999999999999999999999999999999999999875443333
Q ss_pred CCCCcccCCCCCeEecCCCcCcccCCchhhccccccccccccccccc-cCCceeeccCCcceee
Q 046589 506 NIPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVVLTGYIPRSLGHL-SCSVKLNLSGNKLSVL 568 (729)
Q Consensus 506 ~~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~ll~g~ip~~~~~l-~~L~~L~Ls~N~l~~~ 568 (729)
.+++|+.||+++|++++..| ..+..+ ++|++|+|++|.++..
T Consensus 540 ------~l~~L~~L~Ls~N~l~~~~~---------------~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 540 ------CLNSLQVLDYSLNHIMTSKK---------------QELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp ------TCTTCCEEECTTSCCCBCCS---------------SCTTCCCTTCCEEECTTCCBCCS
T ss_pred ------CCCCCCEEECCCCcCCCCCH---------------HHHHhhhCcCCEEEeeCCCCccc
Confidence 67889999999999986544 445555 6799999999999864
No 26
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=8.2e-39 Score=365.31 Aligned_cols=420 Identities=19% Similarity=0.184 Sum_probs=317.9
Q ss_pred cCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEE
Q 046589 104 LLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLS 183 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 183 (729)
..+++.+++++|.+.+..+..+.++++|++|+|++|++++..|.+|.++++|++|+|++|+++ .+|.. .+++|++|+
T Consensus 51 ~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 51 PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 356889999999999877789999999999999999999999999999999999999999998 67776 899999999
Q ss_pred eeccCCCc-cCCccccCCCCCcEEEccCCCCCCCCccccCCCCCC--CeeeccCCcC--CCCCChhhhccCC--CCCEEE
Q 046589 184 LCSNSFTG-EMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRL--QDLDLSDNLL--SGSLTVSLFTNLQ--SLSYLD 256 (729)
Q Consensus 184 Ls~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L--~~L~L~~N~l--~~~~~~~~~~~l~--~L~~L~ 256 (729)
|++|++++ .+|..|+++++|++|++++|.+++. .+..+++| ++|++++|.+ ++..+ ..+..+. .| .++
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~-~~l~~l~~~~l-~l~ 202 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGET-ESLQIPNTTVL-HLV 202 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSC-CEEEECCEEEE-EEE
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCc-ccccccCcceE-EEE
Confidence 99999986 4568999999999999999999863 34555555 9999999998 65444 4455443 22 445
Q ss_pred cccccccccCCc-cccCCCcCCeecccccc-----ccccccccccCCCCcc------------------cccccceeEEE
Q 046589 257 VSNNLLSGNIPP-EISHLKKLSDHYLGINQ-----FTGSIQSELGNCKNFK------------------SVLAELQIFTF 312 (729)
Q Consensus 257 Ls~N~l~~~~p~-~l~~l~~L~~l~l~~n~-----l~~~~~~~l~~l~~l~------------------~~l~~l~l~~l 312 (729)
+++|.+.+.++. .+..+++|+.++++.|. +.+.+ ..+..++.+. .......+..+
T Consensus 203 l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~-~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L 281 (562)
T 3a79_B 203 FHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFL-SELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYL 281 (562)
T ss_dssp ECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHH-HHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEE
T ss_pred ecCccchhhhhhhcccccceEEEecccccccccchHHHHH-HHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEE
Confidence 666666554442 34455666666665553 11100 1111111111 00111257788
Q ss_pred EccCCCCCCCcchhc-----CCCCCCCEEEccCCcceecCCC-CCc---CCCCCcEEEecCCCCCCCCcccccCCCCCcE
Q 046589 313 SAGMNQLSGPLPSWL-----GKWNQMESVWLNNNQFIGRIPL-EVG---NCSMLKYIRLSNNKLSGSIPRELNDSESLVE 383 (729)
Q Consensus 313 ~l~~n~l~~~~p~~l-----~~l~~L~~L~L~~n~l~~~~p~-~l~---~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 383 (729)
+++.|.+.|.+|.++ .+++.|+.+++..+.+ .+|. .+. ...+|++|++++|.+.... ....+++|++
T Consensus 282 ~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~ 357 (562)
T 3a79_B 282 NIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTF 357 (562)
T ss_dssp EEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCE
T ss_pred EEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceE
Confidence 999999999999887 5666666666666665 3331 111 1257999999999986432 1267899999
Q ss_pred EEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCccc--CCcccCCCCCCCEEEccCCccccccCc-CccCCCCCCEEE
Q 046589 384 INLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGR--IPKEIGNLRSIQILKLNSNFFNGSIPM-RLGDSTSLNILE 460 (729)
Q Consensus 384 L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~p~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~ 460 (729)
|++++|.+++.++..+ .++++|++|++++|++++. +|..+.++++|++|++++|++++.+|. .+..+++|+.|+
T Consensus 358 L~l~~n~l~~~~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~ 434 (562)
T 3a79_B 358 LNFTQNVFTDSVFQGC---STLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLN 434 (562)
T ss_dssp EECCSSCCCTTTTTTC---CSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEE
T ss_pred EECCCCccccchhhhh---cccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEE
Confidence 9999999998776655 5677899999999999963 356799999999999999999985665 578899999999
Q ss_pred cccccCCccCchhhhcCCCCCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecCCCcCcccCCchhhccccc
Q 046589 461 LGNNNLNGSIPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVV 540 (729)
Q Consensus 461 Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~l 540 (729)
+++|++++.+|..+. ++|+.||+++|+++ .+|.... .+++|+.|++++|+++.
T Consensus 435 l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~------------~l~~L~~L~L~~N~l~~------------ 487 (562)
T 3a79_B 435 LSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVT------------HLQALQELNVASNQLKS------------ 487 (562)
T ss_dssp CCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTT------------SSCCCSEEECCSSCCCC------------
T ss_pred CCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhc------------CCCCCCEEECCCCCCCC------------
Confidence 999999987776654 68999999999997 4544433 67789999999999972
Q ss_pred cccccccc-cccccCCceeeccCCcceeecc
Q 046589 541 LTGYIPRS-LGHLSCSVKLNLSGNKLSVLVP 570 (729)
Q Consensus 541 l~g~ip~~-~~~l~~L~~L~Ls~N~l~~~~p 570 (729)
+|.. +..+++|+.|++++|.+.+..+
T Consensus 488 ----l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 488 ----VPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp ----CCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred ----CCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 3333 6788999999999999998655
No 27
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=7.3e-38 Score=346.48 Aligned_cols=402 Identities=24% Similarity=0.272 Sum_probs=231.3
Q ss_pred CCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCC-------------CEEeccCCcCcccCCc
Q 046589 105 LRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRL-------------KMLSLGENQLSGSLPS 171 (729)
Q Consensus 105 ~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L-------------~~L~Ls~N~l~~~~p~ 171 (729)
.+++.++++.|.+ |.+|+.++++++|++|++++|.+.+..|..++++++| ++|++++|.+++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 4577788888888 7888888888888888888888888888888877764 888888888874 454
Q ss_pred cccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCC
Q 046589 172 QLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQS 251 (729)
Q Consensus 172 ~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~ 251 (729)
. .++|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|.+++ +| .|..+++
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp--~~~~l~~ 154 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP--ELQNSSF 154 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC--CCTTCTT
T ss_pred C---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc--ccCCCCC
Confidence 2 3678888888888885 6653 3778888888888874 3321 1678888888888874 66 3788888
Q ss_pred CCEEEcccccccccCCccccCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCC
Q 046589 252 LSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWN 331 (729)
Q Consensus 252 L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~ 331 (729)
|++|++++|++++ +|..+ .+|+.++++.|++++ +| .+..++++ ..++++.|.+.+ +|... .
T Consensus 155 L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L---------~~L~l~~N~l~~-l~~~~---~ 215 (454)
T 1jl5_A 155 LKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFL---------TAIYADNNSLKK-LPDLP---L 215 (454)
T ss_dssp CCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTC---------CEEECCSSCCSS-CCCCC---T
T ss_pred CCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCC---------CEEECCCCcCCc-CCCCc---C
Confidence 8888888888875 55543 477788888888775 34 35454443 566777777765 44322 4
Q ss_pred CCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEE
Q 046589 332 QMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKL 411 (729)
Q Consensus 332 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L 411 (729)
+|++|++++|.+. .+| .++.+++|++|++++|++++ +|.. .++|+.|++++|.+++.+ .. +++|++|
T Consensus 216 ~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~l~-~~------~~~L~~L 282 (454)
T 1jl5_A 216 SLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTDLP-EL------PQSLTFL 282 (454)
T ss_dssp TCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSCCC-CC------CTTCCEE
T ss_pred cccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccccC-cc------cCcCCEE
Confidence 7788888888777 555 37777888888888888775 3432 367788888888877632 21 2567788
Q ss_pred EcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCc
Q 046589 412 DLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLS 491 (729)
Q Consensus 412 ~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~ 491 (729)
++++|++++. |. ..++|++|++++|++++ ++. ..++|+.|++++|++++ +|.. +++|+.|++++|+++
T Consensus 283 ~ls~N~l~~l-~~---~~~~L~~L~l~~N~l~~-i~~---~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~ 350 (454)
T 1jl5_A 283 DVSENIFSGL-SE---LPPNLYYLNASSNEIRS-LCD---LPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA 350 (454)
T ss_dssp ECCSSCCSEE-SC---CCTTCCEEECCSSCCSE-ECC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS
T ss_pred ECcCCccCcc-cC---cCCcCCEEECcCCcCCc-ccC---CcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc
Confidence 8888887752 21 12577888888887774 221 12477888888888875 5543 467888888888776
Q ss_pred ccccccccccccccCCCCcccCCCCCeEecCCCcCcc--cCCchhhcccc-ccccccccccccccCCceeeccCCccee-
Q 046589 492 RPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSG--PIPKELGSCVV-VLTGYIPRSLGHLSCSVKLNLSGNKLSV- 567 (729)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g--~~p~~~~~~~~-ll~g~ip~~~~~l~~L~~L~Ls~N~l~~- 567 (729)
+ +|. .+.+|+.|++++|++++ .+|..++.+.. -..|.+|.. +++|+.||+++|++++
T Consensus 351 ~-lp~---------------~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~ 411 (454)
T 1jl5_A 351 E-VPE---------------LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPEL---PQNLKQLHVETNPLREF 411 (454)
T ss_dssp C-CCC---------------CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC----------------------------
T ss_pred c-ccc---------------hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccc---cCcCCEEECCCCcCCcc
Confidence 3 222 24567788888888877 56665544321 133444442 3556666777777666
Q ss_pred -ecccccccccccccccCCcccccC
Q 046589 568 -LVPTSFGNLNGLTNLDLSYNEFDG 591 (729)
Q Consensus 568 -~~p~~~~~l~~L~~L~Ls~N~l~g 591 (729)
.+|. .++.|.+++|.+.+
T Consensus 412 ~~iP~------sl~~L~~~~~~~~~ 430 (454)
T 1jl5_A 412 PDIPE------SVEDLRMNSERVVD 430 (454)
T ss_dssp -------------------------
T ss_pred ccchh------hHhheeCcCcccCC
Confidence 3443 24444555555544
No 28
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=6.5e-38 Score=346.88 Aligned_cols=377 Identities=24% Similarity=0.276 Sum_probs=273.4
Q ss_pred cCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCC-------------cEEEeeccCCC
Q 046589 124 LLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWL-------------ETLSLCSNSFT 190 (729)
Q Consensus 124 ~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L-------------~~L~Ls~N~l~ 190 (729)
.-...++|++|++++|.+ +.+|++++++++|++|++++|.+.+.+|..++.+.+| ++|++++|.++
T Consensus 6 ~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~ 84 (454)
T 1jl5_A 6 RNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS 84 (454)
T ss_dssp -----------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCS
T ss_pred cccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccc
Confidence 334568999999999999 7788899999999999999999999999999998875 99999999998
Q ss_pred ccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccc
Q 046589 191 GEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEI 270 (729)
Q Consensus 191 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l 270 (729)
+ +|.. .++|++|++++|.+++ +|.. +++|++|++++|.+++ ++. ..++|++|++++|.+++ +| .+
T Consensus 85 ~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~----~~~~L~~L~L~~n~l~~-lp-~~ 149 (454)
T 1jl5_A 85 S-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSD----LPPLLEYLGVSNNQLEK-LP-EL 149 (454)
T ss_dssp C-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCS----CCTTCCEEECCSSCCSS-CC-CC
T ss_pred c-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccC----CCCCCCEEECcCCCCCC-Cc-cc
Confidence 5 5542 4799999999999996 6753 4789999999999984 441 12799999999999996 77 59
Q ss_pred cCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCC
Q 046589 271 SHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLE 350 (729)
Q Consensus 271 ~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~ 350 (729)
+.+++|+.++++.|++++ +|.... .+..++++.|.+.+ +| .++.+++|+.|++++|++.+ +|..
T Consensus 150 ~~l~~L~~L~l~~N~l~~-lp~~~~------------~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~ 213 (454)
T 1jl5_A 150 QNSSFLKIIDVDNNSLKK-LPDLPP------------SLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL 213 (454)
T ss_dssp TTCTTCCEEECCSSCCSC-CCCCCT------------TCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC
T ss_pred CCCCCCCEEECCCCcCcc-cCCCcc------------cccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC
Confidence 999999999999999985 444322 34678899999987 56 68999999999999999986 4443
Q ss_pred CcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCC
Q 046589 351 VGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLR 430 (729)
Q Consensus 351 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 430 (729)
.++|++|++++|+++ .+| .+..+++|++|++++|++++.+ .. +++|++|++++|++++ +|.. ++
T Consensus 214 ---~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~-~~------~~~L~~L~l~~N~l~~-l~~~---~~ 277 (454)
T 1jl5_A 214 ---PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTLP-DL------PPSLEALNVRDNYLTD-LPEL---PQ 277 (454)
T ss_dssp ---CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCC-SC------CTTCCEEECCSSCCSC-CCCC---CT
T ss_pred ---cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCccc-cc------ccccCEEECCCCcccc-cCcc---cC
Confidence 258999999999998 567 4889999999999999998743 22 3679999999999996 5543 48
Q ss_pred CCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCcccccccccccccccCCCCc
Q 046589 431 SIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDL 510 (729)
Q Consensus 431 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~ 510 (729)
+|++|++++|++++ +|.. .++|+.|++++|++++ ++. -.++|+.|++++|++++ +|.
T Consensus 278 ~L~~L~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~-i~~---~~~~L~~L~Ls~N~l~~-lp~-------------- 334 (454)
T 1jl5_A 278 SLTFLDVSENIFSG-LSEL---PPNLYYLNASSNEIRS-LCD---LPPSLEELNVSNNKLIE-LPA-------------- 334 (454)
T ss_dssp TCCEEECCSSCCSE-ESCC---CTTCCEEECCSSCCSE-ECC---CCTTCCEEECCSSCCSC-CCC--------------
T ss_pred cCCEEECcCCccCc-ccCc---CCcCCEEECcCCcCCc-ccC---CcCcCCEEECCCCcccc-ccc--------------
Confidence 99999999999986 3321 2689999999999985 332 12589999999999985 332
Q ss_pred ccCCCCCeEecCCCcCcccCCchhhccccccccccccccccccCCceeeccCCccee--ecccccccc------------
Q 046589 511 SYSHNYRKFDLSYNMLSGPIPKELGSCVVVLTGYIPRSLGHLSCSVKLNLSGNKLSV--LVPTSFGNL------------ 576 (729)
Q Consensus 511 ~~~~~l~~ldls~N~l~g~~p~~~~~~~~ll~g~ip~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l------------ 576 (729)
.+++|+.|++++|++++ + |. .+++|++|++++|++++ .+|..+..+
T Consensus 335 -~~~~L~~L~L~~N~l~~-l---------------p~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~ 394 (454)
T 1jl5_A 335 -LPPRLERLIASFNHLAE-V---------------PE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPEL 394 (454)
T ss_dssp -CCTTCCEEECCSSCCSC-C---------------CC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC--------
T ss_pred -cCCcCCEEECCCCcccc-c---------------cc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccc
Confidence 24679999999999973 3 33 25789999999999999 899999888
Q ss_pred -cccccccCCcccccC
Q 046589 577 -NGLTNLDLSYNEFDG 591 (729)
Q Consensus 577 -~~L~~L~Ls~N~l~g 591 (729)
++|+.|++++|++++
T Consensus 395 ~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 395 PQNLKQLHVETNPLRE 410 (454)
T ss_dssp ----------------
T ss_pred cCcCCEEECCCCcCCc
Confidence 889999999999987
No 29
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.8e-36 Score=335.61 Aligned_cols=308 Identities=19% Similarity=0.171 Sum_probs=161.9
Q ss_pred cCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCC
Q 046589 124 LLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQL 203 (729)
Q Consensus 124 ~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L 203 (729)
.+.++++|++|++++|.+++.+ .++.+++|++|+|++|++++ +| ++.+++|++|++++|++++. | ++++++|
T Consensus 37 ~~~~l~~L~~L~Ls~n~l~~~~--~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L 108 (457)
T 3bz5_A 37 SEEQLATLTSLDCHNSSITDMT--GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D--VTPLTKL 108 (457)
T ss_dssp EHHHHTTCCEEECCSSCCCCCT--TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--CTTCTTC
T ss_pred ChhHcCCCCEEEccCCCcccCh--hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--cCCCCcC
Confidence 4444555555555555555431 34555555555555555553 22 45555555555555555532 2 4555555
Q ss_pred cEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeecccc
Q 046589 204 KSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGI 283 (729)
Q Consensus 204 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~ 283 (729)
++|++++|++++ +| ++.+++|++|++++|.+++ ++ +..+++|++|++++|...+.+ .+..+++|+.++++.
T Consensus 109 ~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~---l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~ 179 (457)
T 3bz5_A 109 TYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID---VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSF 179 (457)
T ss_dssp CEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC---CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCS
T ss_pred CEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec---cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCC
Confidence 555555555553 22 4555555555555555543 22 344555555555555333332 244445555555555
Q ss_pred ccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEec
Q 046589 284 NQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLS 363 (729)
Q Consensus 284 n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 363 (729)
|++++. + +..++. +..++++.|.+++. .++.+++|+.|++++|++.+ +| +..+++|++|+++
T Consensus 180 n~l~~l-~--l~~l~~---------L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~ 241 (457)
T 3bz5_A 180 NKITEL-D--VSQNKL---------LNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCS 241 (457)
T ss_dssp SCCCCC-C--CTTCTT---------CCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECC
T ss_pred Ccccee-c--cccCCC---------CCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEee
Confidence 444431 1 111111 12233333333332 24556677777777777766 44 6667777777777
Q ss_pred CCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccc
Q 046589 364 NNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFN 443 (729)
Q Consensus 364 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 443 (729)
+|++++.. +..+++|+.|++++|. |+.|++++|.+.+.+| ++.+++|+.|++++|...
T Consensus 242 ~N~l~~~~---~~~l~~L~~L~l~~n~-----------------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l 299 (457)
T 3bz5_A 242 VNPLTELD---VSTLSKLTTLHCIQTD-----------------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQL 299 (457)
T ss_dssp SSCCSCCC---CTTCTTCCEEECTTCC-----------------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTC
T ss_pred CCcCCCcC---HHHCCCCCEEeccCCC-----------------CCEEECCCCccCCccc--ccccccCCEEECCCCccc
Confidence 77777543 3445566666665543 4456777777666655 466777888888887766
Q ss_pred cccCcC--------ccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCc
Q 046589 444 GSIPMR--------LGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLS 491 (729)
Q Consensus 444 ~~~p~~--------~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~ 491 (729)
+.+|.. +..+++|+.|++++|++++. + +..+++|+.||+++|+++
T Consensus 300 ~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~ 352 (457)
T 3bz5_A 300 YLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQ 352 (457)
T ss_dssp CEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCC
T ss_pred ceeccCCCcceEechhhcccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCC
Confidence 666532 22334455555555555542 2 445555555555555554
No 30
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.7e-35 Score=329.81 Aligned_cols=301 Identities=26% Similarity=0.368 Sum_probs=153.1
Q ss_pred CCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEE
Q 046589 128 LSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLD 207 (729)
Q Consensus 128 L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 207 (729)
+++++.|++++|.+...+ .+..+++|++|+|++|.+++. |. ++.+++|++|++++|.+++..| +.++++|++|+
T Consensus 45 l~~l~~L~l~~~~i~~l~--~~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIKSID--GVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCCCCT--TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCccCc--chhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 445666666666555432 245556666666666666533 22 5566666666666666653332 55666666666
Q ss_pred ccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeecccccccc
Q 046589 208 FSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFT 287 (729)
Q Consensus 208 Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~ 287 (729)
+++|.+++..+ +..+++|++|++++|.+++ ++ .+..+++|++|+++ |.+.+. ..+..+++|+.++++.|.++
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~--~~~~l~~L~~L~l~-~~~~~~--~~~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS--ALSGLTSLQQLSFG-NQVTDL--KPLANLTTLERLDISSNKVS 190 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG--GGTTCTTCSEEEEE-ESCCCC--GGGTTCTTCCEEECCSSCCC
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch--hhccCCcccEeecC-CcccCc--hhhccCCCCCEEECcCCcCC
Confidence 66666553322 5556666666666665552 22 25555666666654 233321 12444555555555444433
Q ss_pred ccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCC
Q 046589 288 GSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKL 367 (729)
Q Consensus 288 ~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 367 (729)
+. ..+..+++|++|++++|.+.+..| ++.+++|++|++++|++
T Consensus 191 ~~-----------------------------------~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l 233 (466)
T 1o6v_A 191 DI-----------------------------------SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQL 233 (466)
T ss_dssp CC-----------------------------------GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred CC-----------------------------------hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCc
Confidence 11 112334445555555555544333 44455555555555555
Q ss_pred CCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccC
Q 046589 368 SGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIP 447 (729)
Q Consensus 368 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 447 (729)
++. ..+..+++|+.|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|++.+..+
T Consensus 234 ~~~--~~l~~l~~L~~L~l~~n~l~~~~~-----~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~ 304 (466)
T 1o6v_A 234 KDI--GTLASLTNLTDLDLANNQISNLAP-----LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 304 (466)
T ss_dssp CCC--GGGGGCTTCSEEECCSSCCCCCGG-----GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG
T ss_pred ccc--hhhhcCCCCCEEECCCCccccchh-----hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh
Confidence 432 234455555555555555544332 2334455555555555554322 4555555555555555554322
Q ss_pred cCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCcc
Q 046589 448 MRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLSR 492 (729)
Q Consensus 448 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~ 492 (729)
+..+++|+.|+|++|++++..| +..+++|+.|++++|++++
T Consensus 305 --~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 305 --ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp --GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred --hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCC
Confidence 4455555555555555554443 4455555555555555543
No 31
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=6.4e-35 Score=325.19 Aligned_cols=345 Identities=26% Similarity=0.346 Sum_probs=263.4
Q ss_pred cCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEE
Q 046589 104 LLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLS 183 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 183 (729)
+.+++.++++++.+.. +| .+..+++|++|+|++|.+++.++ +.++++|++|++++|++++..| ++.+++|++|+
T Consensus 45 l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 4568899999998874 44 47889999999999999998765 8999999999999999985544 99999999999
Q ss_pred eeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEccccccc
Q 046589 184 LCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLS 263 (729)
Q Consensus 184 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 263 (729)
+++|++++. +. +.++++|++|++++|.+.+ ++ .++.+++|++|+++ |.+.+ ++ .+..+++|++|++++|.++
T Consensus 119 L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~-~~--~~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 119 LFNNQITDI-DP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTD-LK--PLANLTTLERLDISSNKVS 190 (466)
T ss_dssp CCSSCCCCC-GG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCC-CG--GGTTCTTCCEEECCSSCCC
T ss_pred CCCCCCCCC-hH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccC-ch--hhccCCCCCEEECcCCcCC
Confidence 999999854 33 9999999999999999985 44 48999999999997 45543 32 3889999999999999988
Q ss_pred ccCCccccCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcc
Q 046589 264 GNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQF 343 (729)
Q Consensus 264 ~~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 343 (729)
+. ..+..+++|+.++++.|.+++..+ ++.+++|+.|++++|++
T Consensus 191 ~~--~~l~~l~~L~~L~l~~n~l~~~~~-----------------------------------~~~l~~L~~L~l~~n~l 233 (466)
T 1o6v_A 191 DI--SVLAKLTNLESLIATNNQISDITP-----------------------------------LGILTNLDELSLNGNQL 233 (466)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG-----------------------------------GGGCTTCCEEECCSSCC
T ss_pred CC--hhhccCCCCCEEEecCCccccccc-----------------------------------ccccCCCCEEECCCCCc
Confidence 53 357888899998888887764322 33456677777777776
Q ss_pred eecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCC
Q 046589 344 IGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIP 423 (729)
Q Consensus 344 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 423 (729)
.+. ..+..+++|++|++++|++++..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|++++..+
T Consensus 234 ~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-----~~~l~~L~~L~L~~n~l~~~~~ 304 (466)
T 1o6v_A 234 KDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-----LAGLTALTNLELNENQLEDISP 304 (466)
T ss_dssp CCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-----GTTCTTCSEEECCSSCCSCCGG
T ss_pred ccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc-----ccCCCccCeEEcCCCcccCchh
Confidence 643 246667777777777777775544 6677777777777777776543 3456677777888777775433
Q ss_pred cccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCccccccccccccc
Q 046589 424 KEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFH 503 (729)
Q Consensus 424 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~ 503 (729)
+..+++|+.|++++|++++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++++..| .
T Consensus 305 --~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~----- 371 (466)
T 1o6v_A 305 --ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--L----- 371 (466)
T ss_dssp --GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--G-----
T ss_pred --hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--h-----
Confidence 6677778888888887776555 56777788888888877754 367777788888888887776443 1
Q ss_pred ccCCCCcccCCCCCeEecCCCcCcc
Q 046589 504 EVNIPDLSYSHNYRKFDLSYNMLSG 528 (729)
Q Consensus 504 ~~~~~~~~~~~~l~~ldls~N~l~g 528 (729)
..+++|+.+++++|.+++
T Consensus 372 -------~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 372 -------ANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp -------TTCTTCCEEECCCEEEEC
T ss_pred -------hcCCCCCEEeccCCcccC
Confidence 255667778888887776
No 32
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=3.1e-35 Score=325.69 Aligned_cols=347 Identities=19% Similarity=0.169 Sum_probs=273.1
Q ss_pred cCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEE
Q 046589 104 LLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLS 183 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 183 (729)
+.+++++++++|.+++. | .+..+++|++|++++|++++.+ ++.+++|++|++++|++++. | ++.+++|++|+
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~~---~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTLD---LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCCC---CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeEc---cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 56799999999999974 4 6899999999999999999963 88999999999999999964 4 89999999999
Q ss_pred eeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEccccccc
Q 046589 184 LCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLS 263 (729)
Q Consensus 184 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 263 (729)
+++|++++ +| ++++++|++|++++|++++. + ++.+++|++|++++|...+.++ +..+++|++|++++|+++
T Consensus 113 L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~---~~~l~~L~~L~ls~n~l~ 183 (457)
T 3bz5_A 113 CDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLD---VTPQTQLTTLDCSFNKIT 183 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCC---CTTCTTCCEEECCSSCCC
T ss_pred CCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccccc---cccCCcCCEEECCCCccc
Confidence 99999996 44 89999999999999999964 3 8899999999999997665663 778999999999999999
Q ss_pred ccCCccccCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcc
Q 046589 264 GNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQF 343 (729)
Q Consensus 264 ~~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 343 (729)
+ +| +..+++|+.++++.|.+++. .+..+++ +..++++.|++.+ +| ++.+++|+.|++++|++
T Consensus 184 ~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~---------L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l 245 (457)
T 3bz5_A 184 E-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQ---------LTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPL 245 (457)
T ss_dssp C-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTT---------CSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCC
T ss_pred e-ec--cccCCCCCEEECcCCcCCee---ccccCCC---------CCEEECcCCcccc-cC--ccccCCCCEEEeeCCcC
Confidence 7 45 88999999999999999875 2444444 3678999999998 56 88999999999999999
Q ss_pred eecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCC
Q 046589 344 IGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIP 423 (729)
Q Consensus 344 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 423 (729)
.+.. ++.+++|+.|++++|++ +.|++++|.+.+.+| +..+++|+.|++++|...+.+|
T Consensus 246 ~~~~---~~~l~~L~~L~l~~n~L--------------~~L~l~~n~~~~~~~-----~~~l~~L~~L~Ls~n~~l~~l~ 303 (457)
T 3bz5_A 246 TELD---VSTLSKLTTLHCIQTDL--------------LEIDLTHNTQLIYFQ-----AEGCRKIKELDVTHNTQLYLLD 303 (457)
T ss_dssp SCCC---CTTCTTCCEEECTTCCC--------------SCCCCTTCTTCCEEE-----CTTCTTCCCCCCTTCTTCCEEE
T ss_pred CCcC---HHHCCCCCEEeccCCCC--------------CEEECCCCccCCccc-----ccccccCCEEECCCCcccceec
Confidence 8754 45567777777766543 334555555444333 1234555556666665444333
Q ss_pred c--------ccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCccccc
Q 046589 424 K--------EIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLSRPIL 495 (729)
Q Consensus 424 ~--------~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~~~ 495 (729)
. .++++++|++|++++|++++ ++ ++.+++|+.|++++|++++ ++.|..|++++|.++|..
T Consensus 304 ~~~~~L~~L~l~~~~~L~~L~L~~N~l~~-l~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~~- 371 (457)
T 3bz5_A 304 CQAAGITELDLSQNPKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAEG- 371 (457)
T ss_dssp CTTCCCSCCCCTTCTTCCEEECTTCCCSC-CC--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEEE-
T ss_pred cCCCcceEechhhcccCCEEECCCCcccc-cc--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEecc-
Confidence 2 24556788999999999987 33 7888999999999999885 245666788888887641
Q ss_pred ccccccccccCCCCcccCCCCCeEecCCCcCcccCCchhh
Q 046589 496 SKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPIPKELG 535 (729)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~p~~~~ 535 (729)
.+..+..+++++|+++|.+|.++.
T Consensus 372 ----------------~~~~l~~l~l~~N~l~g~ip~~~~ 395 (457)
T 3bz5_A 372 ----------------QTITMPKETLTNNSLTIAVSPDLL 395 (457)
T ss_dssp ----------------EEEECCCBCCBTTBEEEECCTTCB
T ss_pred ----------------eeeecCccccccCcEEEEcChhHh
Confidence 223456678899999888887653
No 33
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=323.86 Aligned_cols=322 Identities=19% Similarity=0.178 Sum_probs=278.6
Q ss_pred CcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccC
Q 046589 131 LRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSG 210 (729)
Q Consensus 131 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 210 (729)
-+.++.+++.++.++. .+ .+++++|+|++|++++..|..|..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~~ip~-~~--~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPE-GI--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TTEEECCSCCCSSCCS-CC--CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCcCCC-CC--CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 4678888888887654 33 25899999999999988888999999999999999999988899999999999999999
Q ss_pred CCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeeccccccccccc
Q 046589 211 NGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSI 290 (729)
Q Consensus 211 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~ 290 (729)
|.++...+..|.++++|++|+|++|.+++ ++...|..+++|++|++++|.+.+..|..|..+++|+.++++.|.+++
T Consensus 90 n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-- 166 (477)
T 2id5_A 90 NRLKLIPLGVFTGLSNLTKLDISENKIVI-LLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-- 166 (477)
T ss_dssp SCCCSCCTTSSTTCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSS--
T ss_pred CcCCccCcccccCCCCCCEEECCCCcccc-CChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcc--
Confidence 99986666678999999999999999974 444778899999999999999988888888888888888877776542
Q ss_pred cccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCC
Q 046589 291 QSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGS 370 (729)
Q Consensus 291 ~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 370 (729)
..+..+..+++|+.|++++|.+.+..+..+..+++|++|++++|.+.+.
T Consensus 167 -------------------------------~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~ 215 (477)
T 2id5_A 167 -------------------------------IPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDT 215 (477)
T ss_dssp -------------------------------CCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCE
T ss_pred -------------------------------cChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccc
Confidence 3344567788999999999999988888899999999999999998888
Q ss_pred CcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCc
Q 046589 371 IPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRL 450 (729)
Q Consensus 371 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 450 (729)
+|.......+|+.|++++|.+++.++..+ ..+++|++|+|++|.+++..+..+.++++|+.|+|++|++++..|..+
T Consensus 216 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~---~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 292 (477)
T 2id5_A 216 MTPNCLYGLNLTSLSITHCNLTAVPYLAV---RHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAF 292 (477)
T ss_dssp ECTTTTTTCCCSEEEEESSCCCSCCHHHH---TTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTB
T ss_pred cCcccccCccccEEECcCCcccccCHHHh---cCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHh
Confidence 88777777799999999999987665555 556789999999999998888889999999999999999998889999
Q ss_pred cCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCcc
Q 046589 451 GDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLSR 492 (729)
Q Consensus 451 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~ 492 (729)
..+++|+.|+|++|++++..+..|..+++|+.|++++|+++.
T Consensus 293 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 293 RGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp TTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred cCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 999999999999999998777888999999999999999874
No 34
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=324.37 Aligned_cols=323 Identities=19% Similarity=0.182 Sum_probs=269.8
Q ss_pred EEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccC
Q 046589 109 YQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNS 188 (729)
Q Consensus 109 ~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~ 188 (729)
.++.+++.+. .+|..+. +++++|||++|.+++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 3555556665 4555443 588999999999998888889999999999999999988888899999999999999999
Q ss_pred CCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCc
Q 046589 189 FTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPP 268 (729)
Q Consensus 189 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 268 (729)
+++..+..|.++++|++|+|++|.+.+..|..|..+++|++|++++|.++ .++...|..+++|++|++++|.+++..+.
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV-YISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCC-EECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccc-eeChhhccCCCCCCEEECCCCcCcccChh
Confidence 98666667888999999999999998888888999999999999999887 44446788899999999999998876667
Q ss_pred cccCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCC
Q 046589 269 EISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIP 348 (729)
Q Consensus 269 ~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p 348 (729)
.+..+++|+.++++.|.+.+. .+..+..+++|+.|++++|.+.+.+|
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~---------------------------------~~~~~~~l~~L~~L~l~~~~~~~~~~ 217 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAI---------------------------------RDYSFKRLYRLKVLEISHWPYLDTMT 217 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEE---------------------------------CTTCSCSCTTCCEEEEECCTTCCEEC
T ss_pred HhcccCCCcEEeCCCCcCcEe---------------------------------ChhhcccCcccceeeCCCCccccccC
Confidence 788888888888877766532 22345566788899999988887777
Q ss_pred CCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCC
Q 046589 349 LEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGN 428 (729)
Q Consensus 349 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 428 (729)
.......+|++|++++|+++...+..+..+++|+.|+|++|.+++..+..| ..+++|++|+|++|++++..|..|.+
T Consensus 218 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~---~~l~~L~~L~L~~n~l~~~~~~~~~~ 294 (477)
T 2id5_A 218 PNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSML---HELLRLQEIQLVGGQLAVVEPYAFRG 294 (477)
T ss_dssp TTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSC---TTCTTCCEEECCSSCCSEECTTTBTT
T ss_pred cccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhc---cccccCCEEECCCCccceECHHHhcC
Confidence 777777799999999999997666788999999999999999987766655 56778999999999999988999999
Q ss_pred CCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCc
Q 046589 429 LRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIP 471 (729)
Q Consensus 429 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 471 (729)
+++|+.|++++|++++..+..+..+++|+.|+|++|.+....+
T Consensus 295 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 295 LNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp CTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGG
T ss_pred cccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccc
Confidence 9999999999999997777788899999999999999986543
No 35
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2e-33 Score=305.68 Aligned_cols=312 Identities=18% Similarity=0.213 Sum_probs=210.7
Q ss_pred CCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcE
Q 046589 126 FDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKS 205 (729)
Q Consensus 126 ~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 205 (729)
..++++++|++++|.++.+++..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|++++..|..|.++++|++
T Consensus 42 ~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 42 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 34678888888888888877777788888888888888888777778888888888888888888777777888888888
Q ss_pred EEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeecccccc
Q 046589 206 LDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQ 285 (729)
Q Consensus 206 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~ 285 (729)
|++++|.++...+..|..+++|++|++++|.++ .++...|..+++|++|++++|.+++. .+..+++|+.++++.|.
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNL 197 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSC
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccC-ccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccc
Confidence 888888887444444677888888888888876 34446677777888888877776643 13334444444444443
Q ss_pred ccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCC
Q 046589 286 FTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNN 365 (729)
Q Consensus 286 l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N 365 (729)
+ .+. ...++|++|++++|
T Consensus 198 l---------------------------------------------------------~~~-----~~~~~L~~L~l~~n 215 (390)
T 3o6n_A 198 L---------------------------------------------------------STL-----AIPIAVEELDASHN 215 (390)
T ss_dssp C---------------------------------------------------------SEE-----ECCSSCSEEECCSS
T ss_pred c---------------------------------------------------------ccc-----CCCCcceEEECCCC
Confidence 3 221 11124455555555
Q ss_pred CCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccc
Q 046589 366 KLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGS 445 (729)
Q Consensus 366 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 445 (729)
++... |.. ..++|+.|++++|.+++. ..+..+++|++|++++|.+++..|..+..+++|++|++++|++++
T Consensus 216 ~l~~~-~~~--~~~~L~~L~l~~n~l~~~-----~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~- 286 (390)
T 3o6n_A 216 SINVV-RGP--VNVELTILKLQHNNLTDT-----AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA- 286 (390)
T ss_dssp CCCEE-ECC--CCSSCCEEECCSSCCCCC-----GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-
T ss_pred eeeec-ccc--ccccccEEECCCCCCccc-----HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-
Confidence 54432 221 124555566666655542 123445667777777777776667777777777777777777763
Q ss_pred cCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecCCCc
Q 046589 446 IPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNM 525 (729)
Q Consensus 446 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~ 525 (729)
+|..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+++.. + +..+++|+.+++++|.
T Consensus 287 ~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--------------~~~~~~L~~L~l~~N~ 350 (390)
T 3o6n_A 287 LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--------------LSTHHTLKNLTLSHND 350 (390)
T ss_dssp EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--------------CCTTCCCSEEECCSSC
T ss_pred cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--------------chhhccCCEEEcCCCC
Confidence 4555566777777777777776 5566677777777777777777631 1 2245667777888777
Q ss_pred Ccc
Q 046589 526 LSG 528 (729)
Q Consensus 526 l~g 528 (729)
+.+
T Consensus 351 ~~~ 353 (390)
T 3o6n_A 351 WDC 353 (390)
T ss_dssp EEH
T ss_pred ccc
Confidence 765
No 36
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.3e-32 Score=294.40 Aligned_cols=307 Identities=24% Similarity=0.353 Sum_probs=187.1
Q ss_pred CCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCc
Q 046589 125 LFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLK 204 (729)
Q Consensus 125 l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 204 (729)
+..+++|++|++++|.+.... .+..+++|++|++++|++++ +|. +..+++|++|++++|.++. + +.+.++++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~~--~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASIQ--GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCCT--TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCS
T ss_pred chhcccccEEEEeCCccccch--hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCC
Confidence 346677888888888877653 36778888888888888874 343 7788888888888888774 3 3577888888
Q ss_pred EEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeeccccc
Q 046589 205 SLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGIN 284 (729)
Q Consensus 205 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n 284 (729)
+|++++|.+.+. +. +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.++++.|
T Consensus 114 ~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~--~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n 187 (347)
T 4fmz_A 114 ELYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS--PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYN 187 (347)
T ss_dssp EEECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTS
T ss_pred EEECcCCcccCc-hh-hccCCceeEEECCCCCCccccc--chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCC
Confidence 888888887743 33 7778888888888875543333 36777778888877777664322 555556665555555
Q ss_pred cccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecC
Q 046589 285 QFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSN 364 (729)
Q Consensus 285 ~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~ 364 (729)
.+++. +. +..+++|+.|++++|.+.+..+ +..+++|++|++++
T Consensus 188 ~l~~~----------------------------------~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~ 230 (347)
T 4fmz_A 188 QIEDI----------------------------------SP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGN 230 (347)
T ss_dssp CCCCC----------------------------------GG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCS
T ss_pred ccccc----------------------------------cc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccC
Confidence 44311 11 3334555666666666554333 55556666666666
Q ss_pred CCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCcccc
Q 046589 365 NKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNG 444 (729)
Q Consensus 365 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 444 (729)
|++++..+ +..+++|++|++++|.+++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|.+++
T Consensus 231 n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-----~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~ 301 (347)
T 4fmz_A 231 NKITDLSP--LANLSQLTWLEIGTNQISDI-----NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGN 301 (347)
T ss_dssp SCCCCCGG--GTTCTTCCEEECCSSCCCCC-----GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCG
T ss_pred CccCCCcc--hhcCCCCCEEECCCCccCCC-----hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCC
Confidence 66654332 55556666666666655542 1223455556666666655542 235555566666666665555
Q ss_pred ccCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCc
Q 046589 445 SIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLS 491 (729)
Q Consensus 445 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~ 491 (729)
..|..+..+++|+.|++++|++++..| +..+++|+.||+++|+|+
T Consensus 302 ~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 302 EDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 555555555566666666666554444 555555666666655543
No 37
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-32 Score=299.67 Aligned_cols=315 Identities=20% Similarity=0.151 Sum_probs=255.8
Q ss_pred CCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCee
Q 046589 151 NLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDL 230 (729)
Q Consensus 151 ~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 230 (729)
.++++++|++++|.++...+..+..+++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..++++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 46789999999999985444557889999999999999998888899999999999999999998888889999999999
Q ss_pred eccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeeccccccccccccccccCCCCcccccccceeE
Q 046589 231 DLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIF 310 (729)
Q Consensus 231 ~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~ 310 (729)
++++|.++ .++...|..+++|++|++++|.+++..|..+..+++|+
T Consensus 123 ~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~--------------------------------- 168 (390)
T 3o6n_A 123 VLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQ--------------------------------- 168 (390)
T ss_dssp ECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCC---------------------------------
T ss_pred ECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCC---------------------------------
Confidence 99999987 67767778888999999888887755555555554444
Q ss_pred EEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCC
Q 046589 311 TFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNM 390 (729)
Q Consensus 311 ~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 390 (729)
+|++++|++.+. .+..+++|++|++++|.+++ +...++|+.|++++|.
T Consensus 169 ------------------------~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~ 216 (390)
T 3o6n_A 169 ------------------------NLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNS 216 (390)
T ss_dssp ------------------------EEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSC
T ss_pred ------------------------EEECCCCcCCcc---ccccccccceeecccccccc-----cCCCCcceEEECCCCe
Confidence 444444444432 24556789999999999874 3345689999999999
Q ss_pred CCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccC
Q 046589 391 LSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSI 470 (729)
Q Consensus 391 l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 470 (729)
+...... ..++|+.|++++|.+++. ..+..+++|++|++++|.+++..|..+..+++|+.|+|++|++++ +
T Consensus 217 l~~~~~~------~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~ 287 (390)
T 3o6n_A 217 INVVRGP------VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-L 287 (390)
T ss_dssp CCEEECC------CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-E
T ss_pred eeecccc------ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-c
Confidence 9865332 246799999999999864 678999999999999999998889999999999999999999985 6
Q ss_pred chhhhcCCCCCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecCCCcCcccCCchhhccccccccccccccc
Q 046589 471 PEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVVLTGYIPRSLG 550 (729)
Q Consensus 471 p~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~ll~g~ip~~~~ 550 (729)
|..+..+++|+.|++++|+++. +|.... .+++|+.|++++|+++.. | +.
T Consensus 288 ~~~~~~l~~L~~L~L~~n~l~~-~~~~~~------------~l~~L~~L~L~~N~i~~~-~-----------------~~ 336 (390)
T 3o6n_A 288 NLYGQPIPTLKVLDLSHNHLLH-VERNQP------------QFDRLENLYLDHNSIVTL-K-----------------LS 336 (390)
T ss_dssp ECSSSCCTTCCEEECCSSCCCC-CGGGHH------------HHTTCSEEECCSSCCCCC-C-----------------CC
T ss_pred CcccCCCCCCCEEECCCCccee-cCcccc------------ccCcCCEEECCCCcccee-C-----------------ch
Confidence 7777889999999999999974 333322 567899999999999863 2 34
Q ss_pred cccCCceeeccCCcceeeccc
Q 046589 551 HLSCSVKLNLSGNKLSVLVPT 571 (729)
Q Consensus 551 ~l~~L~~L~Ls~N~l~~~~p~ 571 (729)
.+++|+.|++++|++.+....
T Consensus 337 ~~~~L~~L~l~~N~~~~~~~~ 357 (390)
T 3o6n_A 337 THHTLKNLTLSHNDWDCNSLR 357 (390)
T ss_dssp TTCCCSEEECCSSCEEHHHHH
T ss_pred hhccCCEEEcCCCCccchhHH
Confidence 578899999999999987543
No 38
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.9e-33 Score=318.78 Aligned_cols=289 Identities=17% Similarity=0.194 Sum_probs=173.0
Q ss_pred CCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEE
Q 046589 127 DLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSL 206 (729)
Q Consensus 127 ~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 206 (729)
.+++++.|++++|.+..+++..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 35677788888887777777777777888888888888877667777788888888888888877777777778888888
Q ss_pred EccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeeccccccc
Q 046589 207 DFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQF 286 (729)
Q Consensus 207 ~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l 286 (729)
+|++|.+++..+..|+.+++|++|+|++|.+++ +++..|..+++|++|++++|.+++.. +..+++|+.++++.|.+
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l 204 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER-IEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLL 204 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB-CCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCC
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCC-CChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcc
Confidence 888887775555556777777777777777764 34356677777777777777766431 33344444444444433
Q ss_pred cccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCC
Q 046589 287 TGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNK 366 (729)
Q Consensus 287 ~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 366 (729)
++. ....+|+.|++++|.+....+.. .++|+.|+|++|.
T Consensus 205 ~~l--------------------------------------~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~ 243 (597)
T 3oja_B 205 STL--------------------------------------AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNN 243 (597)
T ss_dssp SEE--------------------------------------ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSC
T ss_pred ccc--------------------------------------cCCchhheeeccCCccccccccc---CCCCCEEECCCCC
Confidence 210 01123444555555444322211 1344455555554
Q ss_pred CCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCcccccc
Q 046589 367 LSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSI 446 (729)
Q Consensus 367 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 446 (729)
+++ +..+.. +++|++|+|++|.+++..|..|..+++|+.|+|++|.+++ +
T Consensus 244 l~~--~~~l~~---------------------------l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l 293 (597)
T 3oja_B 244 LTD--TAWLLN---------------------------YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-L 293 (597)
T ss_dssp CCC--CGGGGG---------------------------CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-E
T ss_pred CCC--Chhhcc---------------------------CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-C
Confidence 443 123333 4445555555555555555555555555555555555553 3
Q ss_pred CcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCc
Q 046589 447 PMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLS 491 (729)
Q Consensus 447 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~ 491 (729)
|..+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|.++
T Consensus 294 ~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~ 337 (597)
T 3oja_B 294 NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV 337 (597)
T ss_dssp ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCC
T ss_pred CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCC
Confidence 444444555555555555555 34445555555555555555554
No 39
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3e-32 Score=312.91 Aligned_cols=314 Identities=21% Similarity=0.158 Sum_probs=249.3
Q ss_pred CCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCee
Q 046589 151 NLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDL 230 (729)
Q Consensus 151 ~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 230 (729)
.+.+++.|++++|.+....+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|+.+++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 36789999999999986666667889999999999999998888899999999999999999998888889999999999
Q ss_pred eccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeeccccccccccccccccCCCCcccccccceeE
Q 046589 231 DLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIF 310 (729)
Q Consensus 231 ~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~ 310 (729)
+|++|.++ .++...|..+++|++|+|++|.+++..|..++.+++|+.|+++.|.+++.
T Consensus 129 ~L~~n~l~-~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--------------------- 186 (597)
T 3oja_B 129 VLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV--------------------- 186 (597)
T ss_dssp ECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---------------------
T ss_pred EeeCCCCC-CCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---------------------
Confidence 99999998 67767788999999999999998877777777777777777666655421
Q ss_pred EEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCC
Q 046589 311 TFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNM 390 (729)
Q Consensus 311 ~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 390 (729)
.+..+++|++|++++|.+++ +....+|+.|++++|.
T Consensus 187 ---------------------------------------~~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~ 222 (597)
T 3oja_B 187 ---------------------------------------DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNS 222 (597)
T ss_dssp ---------------------------------------CGGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSC
T ss_pred ---------------------------------------ChhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCc
Confidence 02223344444444444432 1223345555666555
Q ss_pred CCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccC
Q 046589 391 LSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSI 470 (729)
Q Consensus 391 l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 470 (729)
+....+.. .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+.+..|..++.+++|+.|+|++|++++ +
T Consensus 223 l~~~~~~~------~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l 293 (597)
T 3oja_B 223 INVVRGPV------NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-L 293 (597)
T ss_dssp CCEEECSC------CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-E
T ss_pred cccccccc------CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-C
Confidence 54333222 2468899999999986 4788999999999999999999999999999999999999999985 6
Q ss_pred chhhhcCCCCCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecCCCcCcccCCchhhccccccccccccccc
Q 046589 471 PEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVVLTGYIPRSLG 550 (729)
Q Consensus 471 p~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~ll~g~ip~~~~ 550 (729)
|..+..+++|+.|+|++|.++. +|..+. .+++|+.|++++|.+++. | +.
T Consensus 294 ~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~------------~l~~L~~L~L~~N~l~~~-~-----------------~~ 342 (597)
T 3oja_B 294 NLYGQPIPTLKVLDLSHNHLLH-VERNQP------------QFDRLENLYLDHNSIVTL-K-----------------LS 342 (597)
T ss_dssp ECSSSCCTTCCEEECCSSCCCC-CGGGHH------------HHTTCSEEECCSSCCCCC-C-----------------CC
T ss_pred CcccccCCCCcEEECCCCCCCc-cCcccc------------cCCCCCEEECCCCCCCCc-C-----------------hh
Confidence 7777889999999999999983 444333 567899999999999864 2 34
Q ss_pred cccCCceeeccCCcceeecc
Q 046589 551 HLSCSVKLNLSGNKLSVLVP 570 (729)
Q Consensus 551 ~l~~L~~L~Ls~N~l~~~~p 570 (729)
.+++|+.|++++|.+.+...
T Consensus 343 ~~~~L~~L~l~~N~~~~~~~ 362 (597)
T 3oja_B 343 THHTLKNLTLSHNDWDCNSL 362 (597)
T ss_dssp TTCCCSEEECCSSCEEHHHH
T ss_pred hcCCCCEEEeeCCCCCChhH
Confidence 56789999999999998754
No 40
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.2e-31 Score=286.81 Aligned_cols=308 Identities=22% Similarity=0.321 Sum_probs=251.0
Q ss_pred cccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCC
Q 046589 148 QVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRL 227 (729)
Q Consensus 148 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 227 (729)
.+..+++|+.|++++|.+. .+| .+..+++|++|++++|++++ ++. +.++++|++|++++|.++. +| .+..+++|
T Consensus 39 ~~~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L 112 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNL 112 (347)
T ss_dssp CHHHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTC
T ss_pred cchhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcC
Confidence 3457889999999999997 455 48999999999999999985 444 9999999999999999985 44 69999999
Q ss_pred CeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeeccccccccccccccccCCCCcccccccc
Q 046589 228 QDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAEL 307 (729)
Q Consensus 228 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l 307 (729)
++|++++|.++ .++. +..+++|++|++++|.....++ .+..+++|+.++++.|.+.+.
T Consensus 113 ~~L~l~~n~i~-~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~------------------ 170 (347)
T 4fmz_A 113 RELYLNEDNIS-DISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDV------------------ 170 (347)
T ss_dssp SEEECTTSCCC-CCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCC------------------
T ss_pred CEEECcCCccc-Cchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCc------------------
Confidence 99999999998 4443 8899999999999997654443 478888888888777765421
Q ss_pred eeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcC
Q 046589 308 QIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLD 387 (729)
Q Consensus 308 ~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 387 (729)
+. +..+++|+.|++++|.+.+..+ +..+++|++|++++|++++..+ +..+++|+.|+++
T Consensus 171 ----------------~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~ 229 (347)
T 4fmz_A 171 ----------------TP-IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIG 229 (347)
T ss_dssp ----------------GG-GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECC
T ss_pred ----------------hh-hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEcc
Confidence 11 5567889999999999876443 7888999999999999986544 8888999999999
Q ss_pred CCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCC
Q 046589 388 GNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLN 467 (729)
Q Consensus 388 ~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 467 (729)
+|.+++..+ +..+++|++|++++|.+++. ..+..+++|++|++++|.+++. ..+..+++|+.|++++|+++
T Consensus 230 ~n~l~~~~~-----~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~ 300 (347)
T 4fmz_A 230 NNKITDLSP-----LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLG 300 (347)
T ss_dssp SSCCCCCGG-----GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred CCccCCCcc-----hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCC
Confidence 999987654 45678899999999999863 5688999999999999999854 45788899999999999999
Q ss_pred ccCchhhhcCCCCCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecCCCcCc
Q 046589 468 GSIPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLS 527 (729)
Q Consensus 468 ~~~p~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~ 527 (729)
+..|..+..+++|+.|++++|++++..| +..+++|+.+|+++|.++
T Consensus 301 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~--------------~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 301 NEDMEVIGGLTNLTTLFLSQNHITDIRP--------------LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GGGHHHHHTCTTCSEEECCSSSCCCCGG--------------GGGCTTCSEESSSCC---
T ss_pred CcChhHhhccccCCEEEccCCccccccC--------------hhhhhccceeehhhhccc
Confidence 8888999999999999999999986433 225677888888888764
No 41
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=6e-31 Score=279.66 Aligned_cols=289 Identities=21% Similarity=0.294 Sum_probs=185.4
Q ss_pred CCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEc
Q 046589 129 SKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDF 208 (729)
Q Consensus 129 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 208 (729)
.+++++++++|.++.++. .+ .++|++|+|++|.+++..|..|+.+++|++|+|++|++++..|..|.++++|++|++
T Consensus 33 c~l~~l~~~~~~l~~ip~-~~--~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPK-EI--SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp EETTEEECCSSCCSSCCS-CC--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred ccCCEEECCCCCccccCC-CC--CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 368888998888876543 33 257888899988888777778888888888888888888777888888888888888
Q ss_pred cCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccc--cCCccccCCCcCCeeccccccc
Q 046589 209 SGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSG--NIPPEISHLKKLSDHYLGINQF 286 (729)
Q Consensus 209 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~l~l~~n~l 286 (729)
++|.++ .+|..+. ++|++|++++|.++ .++...|..+++|++|++++|.++. ..|..+..+ +|+.++++.|++
T Consensus 110 ~~n~l~-~l~~~~~--~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP--SSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp CSSCCC-SCCSSCC--TTCCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred CCCcCC-ccCcccc--ccCCEEECCCCccC-ccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCC
Confidence 888887 5665554 78888888888887 5665677888888888888887753 445555555 555555555544
Q ss_pred cccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCC
Q 046589 287 TGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNK 366 (729)
Q Consensus 287 ~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 366 (729)
++ +|..+. ++|++|++++|+
T Consensus 185 ~~----------------------------------------------------------l~~~~~--~~L~~L~l~~n~ 204 (332)
T 2ft3_A 185 TG----------------------------------------------------------IPKDLP--ETLNELHLDHNK 204 (332)
T ss_dssp SS----------------------------------------------------------CCSSSC--SSCSCCBCCSSC
T ss_pred Cc----------------------------------------------------------cCcccc--CCCCEEECCCCc
Confidence 32 121111 344444455555
Q ss_pred CCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCcccccc
Q 046589 367 LSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSI 446 (729)
Q Consensus 367 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 446 (729)
+++..+..+..+++|+.|++++|.+++..+..+ ..+++|++|++++|+++ .+|..+..+++|++|++++|++++..
T Consensus 205 i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~ 280 (332)
T 2ft3_A 205 IQAIELEDLLRYSKLYRLGLGHNQIRMIENGSL---SFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVG 280 (332)
T ss_dssp CCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGG---GGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCC
T ss_pred CCccCHHHhcCCCCCCEEECCCCcCCcCChhHh---hCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccC
Confidence 444444444444455555555554444443333 23345555666666655 45555666666666666666666444
Q ss_pred CcCccC------CCCCCEEEcccccCC--ccCchhhhcCCCCCEEeCCCCc
Q 046589 447 PMRLGD------STSLNILELGNNNLN--GSIPEKIADLAQLQFLDLSYNN 489 (729)
Q Consensus 447 p~~~~~------l~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~LdLs~N~ 489 (729)
+..+.. ..+|+.|++++|.+. +..|..|..+++|+.+++++|+
T Consensus 281 ~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 281 VNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp TTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred hhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 444432 345677777777765 4566667777777777777663
No 42
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=1e-30 Score=277.87 Aligned_cols=291 Identities=20% Similarity=0.239 Sum_probs=216.7
Q ss_pred CcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEee
Q 046589 106 RVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLC 185 (729)
Q Consensus 106 ~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls 185 (729)
+++.++++++.+. .+|..+. ++|++|++++|.+++..+..|.++++|++|+|++|++++..|..|+.+++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4678899998887 5776554 699999999999999988899999999999999999998889999999999999999
Q ss_pred ccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCC-CCChhhhccCCCCCEEEcccccccc
Q 046589 186 SNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSG-SLTVSLFTNLQSLSYLDVSNNLLSG 264 (729)
Q Consensus 186 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~~l~~L~~L~Ls~N~l~~ 264 (729)
+|+++ .+|..+. ++|++|++++|.++...+..+..+++|++|++++|.++. .+....+..+ +|++|++++|.+++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 99998 6676665 899999999999997777789999999999999999862 2344667777 99999999999985
Q ss_pred cCCccccCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcce
Q 046589 265 NIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFI 344 (729)
Q Consensus 265 ~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 344 (729)
+|..+. ++|+.++++.|.+++ ..+..+..+++|+.|++++|++.
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~---------------------------------~~~~~l~~l~~L~~L~L~~N~l~ 230 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQA---------------------------------IELEDLLRYSKLYRLGLGHNQIR 230 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCC---------------------------------CCTTSSTTCTTCSCCBCCSSCCC
T ss_pred -cCcccc--CCCCEEECCCCcCCc---------------------------------cCHHHhcCCCCCCEEECCCCcCC
Confidence 565443 566666666655542 33345556677777777777777
Q ss_pred ecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccC---CCCCCcEEEcCCCcCc--
Q 046589 345 GRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCT---NLSQLEKLDLSSNMLT-- 419 (729)
Q Consensus 345 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~---~l~~L~~L~Ls~N~l~-- 419 (729)
+..+..+..+++|++|++++|+++ .+|..+..+++|+.|++++|.+++..+..|.... ....|+.|++++|.+.
T Consensus 231 ~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~ 309 (332)
T 2ft3_A 231 MIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYW 309 (332)
T ss_dssp CCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGG
T ss_pred cCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccccc
Confidence 766666777777777777777776 5666677777777777777777665555543221 1234555555555554
Q ss_pred ccCCcccCCCCCCCEEEccCC
Q 046589 420 GRIPKEIGNLRSIQILKLNSN 440 (729)
Q Consensus 420 ~~~p~~l~~l~~L~~L~L~~N 440 (729)
+..|..|..+++|+.+++++|
T Consensus 310 ~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 310 EVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp GSCGGGGTTBCCSTTEEC---
T ss_pred ccCcccccccchhhhhhcccc
Confidence 334444555555555555544
No 43
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=4.4e-30 Score=272.72 Aligned_cols=289 Identities=21% Similarity=0.267 Sum_probs=172.1
Q ss_pred CCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEcc
Q 046589 130 KLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFS 209 (729)
Q Consensus 130 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 209 (729)
++++++++++.++..+. .+ .++|++|+|++|++++..+..|+.+++|++|+|++|++++..|..|.++++|++|+++
T Consensus 32 ~l~~l~~~~~~l~~lp~-~~--~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLEKVPK-DL--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCCSCCC-SC--CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCccccCc-cC--CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 56777777777765432 22 2467777777777776656667777777777777777776667777777777777777
Q ss_pred CCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccc--cCCccccCCCcCCeecccccccc
Q 046589 210 GNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSG--NIPPEISHLKKLSDHYLGINQFT 287 (729)
Q Consensus 210 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~l~l~~n~l~ 287 (729)
+|.++ .+|..+. ++|++|++++|.++ .++...|..+++|++|++++|.+.. ..+..+..+++|+.++++.|.+
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l- 183 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI- 183 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC-
T ss_pred CCcCC-ccChhhc--ccccEEECCCCccc-ccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc-
Confidence 77776 4555443 56777777777776 4555666777777777777776642 3334444444444444444333
Q ss_pred ccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCC
Q 046589 288 GSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKL 367 (729)
Q Consensus 288 ~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 367 (729)
.. +|..+. ++|++|++++|++
T Consensus 184 --------------------------------------------------------~~-l~~~~~--~~L~~L~l~~n~l 204 (330)
T 1xku_A 184 --------------------------------------------------------TT-IPQGLP--PSLTELHLDGNKI 204 (330)
T ss_dssp --------------------------------------------------------CS-CCSSCC--TTCSEEECTTSCC
T ss_pred --------------------------------------------------------cc-CCcccc--ccCCEEECCCCcC
Confidence 21 222111 3455555555555
Q ss_pred CCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccC
Q 046589 368 SGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIP 447 (729)
Q Consensus 368 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 447 (729)
++..|..+..+++|+.|++++|.+++..+..+ ..+++|++|+|++|+++ .+|..+..+++|++|++++|++++..+
T Consensus 205 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~---~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~ 280 (330)
T 1xku_A 205 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSL---ANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGS 280 (330)
T ss_dssp CEECTGGGTTCTTCCEEECCSSCCCEECTTTG---GGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCT
T ss_pred CccCHHHhcCCCCCCEEECCCCcCceeChhhc---cCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccCh
Confidence 54444455555555555555555544443333 23445666666666665 455566666666666666666664444
Q ss_pred cCccC------CCCCCEEEcccccCCc--cCchhhhcCCCCCEEeCCCCc
Q 046589 448 MRLGD------STSLNILELGNNNLNG--SIPEKIADLAQLQFLDLSYNN 489 (729)
Q Consensus 448 ~~~~~------l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~LdLs~N~ 489 (729)
..+.. ...|+.|++++|.+.. ..|..|..+.+++.+++++|+
T Consensus 281 ~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 281 NDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp TSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred hhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 44432 3567777777777753 456677777788888887774
No 44
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=2.8e-30 Score=274.29 Aligned_cols=290 Identities=24% Similarity=0.280 Sum_probs=226.4
Q ss_pred CCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeecc
Q 046589 154 RLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLS 233 (729)
Q Consensus 154 ~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 233 (729)
+|++++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..++.+++|++|+++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 6889999999987 6777664 678899999999987777788899999999999999987778888888888888888
Q ss_pred CCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeeccccccccccccccccCCCCcccccccceeEEEE
Q 046589 234 DNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFS 313 (729)
Q Consensus 234 ~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~ 313 (729)
+|.++ .++...+ ++|++|++++|.+++..+..+..
T Consensus 109 ~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~----------------------------------------- 143 (330)
T 1xku_A 109 KNQLK-ELPEKMP---KTLQELRVHENEITKVRKSVFNG----------------------------------------- 143 (330)
T ss_dssp SSCCS-BCCSSCC---TTCCEEECCSSCCCBBCHHHHTT-----------------------------------------
T ss_pred CCcCC-ccChhhc---ccccEEECCCCcccccCHhHhcC-----------------------------------------
Confidence 88887 5553322 56777777777665443333444
Q ss_pred ccCCCCCCCcchhcCCCCCCCEEEccCCcce--ecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCC
Q 046589 314 AGMNQLSGPLPSWLGKWNQMESVWLNNNQFI--GRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNML 391 (729)
Q Consensus 314 l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~--~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 391 (729)
+++|+.|++++|.+. +..+..+..+++|++|++++|+++. +|..+. ++|+.|++++|.+
T Consensus 144 ----------------l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l 204 (330)
T 1xku_A 144 ----------------LNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKI 204 (330)
T ss_dssp ----------------CTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCC
T ss_pred ----------------CccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcC
Confidence 445555555555553 2455667888999999999999985 555443 8999999999999
Q ss_pred CCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCc
Q 046589 392 SGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIP 471 (729)
Q Consensus 392 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 471 (729)
++..+..+ ..+++|++|++++|.+++..+..+..+++|++|++++|+++ .+|.++..+++|++|++++|++++..+
T Consensus 205 ~~~~~~~~---~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~ 280 (330)
T 1xku_A 205 TKVDAASL---KGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGS 280 (330)
T ss_dssp CEECTGGG---TTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCT
T ss_pred CccCHHHh---cCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccCh
Confidence 98766665 56778999999999999888889999999999999999998 889999999999999999999998777
Q ss_pred hhhhcC------CCCCEEeCCCCcCccc-ccccccccccccCCCCcccCCCCCeEecCCCc
Q 046589 472 EKIADL------AQLQFLDLSYNNLSRP-ILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNM 525 (729)
Q Consensus 472 ~~l~~l------~~L~~LdLs~N~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~ 525 (729)
..|... ..++.|++++|++... +++ ..+..+..++.+++++|+
T Consensus 281 ~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~-----------~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 281 NDFCPPGYNTKKASYSGVSLFSNPVQYWEIQP-----------STFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp TSSSCSSCCTTSCCCSEEECCSSSSCGGGSCG-----------GGGTTCCCGGGEEC----
T ss_pred hhcCCcccccccccccceEeecCcccccccCc-----------cccccccceeEEEecccC
Confidence 777543 7889999999998631 111 223467788999999985
No 45
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=6.8e-32 Score=284.24 Aligned_cols=248 Identities=27% Similarity=0.451 Sum_probs=132.4
Q ss_pred CcEEEEcCCCCCcC--cCCccCCCCCCCcEEECCC-CCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEE
Q 046589 106 RVVYQVLRTQSLKG--PVSPLLFDLSKLRVLNLSQ-NLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETL 182 (729)
Q Consensus 106 ~~~~l~l~~~~l~~--~~~~~l~~L~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L 182 (729)
+++.++++++.+.| .+|+.+.++++|++|++++ |.+.+..|..|+++++|++|+|++|++++.+|..|+.+++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 45555555555555 4555555555555555552 55555555555555555555555555555555555555555555
Q ss_pred EeeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCC-CCCeeeccCCcCCCCCChhhhccCCCCCEEEccccc
Q 046589 183 SLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELT-RLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNL 261 (729)
Q Consensus 183 ~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~ 261 (729)
+|++|.+++.+|..|.++++|++|++++|.+++.+|..++.++ +|++|++++|.+++.++ ..+..++ |++|++++|.
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~-~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIP-PTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECC-GGGGGCC-CSEEECCSSE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCC-hHHhCCc-ccEEECcCCc
Confidence 5555555555555555555555555555555544555555544 45555555554443333 3334443 4444444444
Q ss_pred ccccCCccccCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCC
Q 046589 262 LSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNN 341 (729)
Q Consensus 262 l~~~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n 341 (729)
+++..|..+.. +++|+.|++++|
T Consensus 209 l~~~~~~~~~~---------------------------------------------------------l~~L~~L~L~~N 231 (313)
T 1ogq_A 209 LEGDASVLFGS---------------------------------------------------------DKNTQKIHLAKN 231 (313)
T ss_dssp EEECCGGGCCT---------------------------------------------------------TSCCSEEECCSS
T ss_pred ccCcCCHHHhc---------------------------------------------------------CCCCCEEECCCC
Confidence 44444444444 444555555555
Q ss_pred cceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCc
Q 046589 342 QFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNM 417 (729)
Q Consensus 342 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~ 417 (729)
++.+.+|. +..+++|++|+|++|++++.+|..+..+++|+.|++++|++++.+|.. ..+++|+.+++++|.
T Consensus 232 ~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~----~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 232 SLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG----GNLQRFDVSAYANNK 302 (313)
T ss_dssp EECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS----TTGGGSCGGGTCSSS
T ss_pred ceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC----ccccccChHHhcCCC
Confidence 55544433 445556666666666666566666666666666666666666555543 345566667777775
No 46
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=2e-31 Score=280.66 Aligned_cols=252 Identities=29% Similarity=0.455 Sum_probs=185.1
Q ss_pred CCCcEEECCCCCCCC--CCcccccCCCCCCEEeccC-CcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcE
Q 046589 129 SKLRVLNLSQNLLFG--QPSPQVSNLKRLKMLSLGE-NQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKS 205 (729)
Q Consensus 129 ~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 205 (729)
.++++|+|++|.+++ ..|..|+++++|++|+|++ |.+.+.+|..|+.+++|++|+|++|++++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 467777777777776 5666777777777777773 6666667777777777777777777776666766777777777
Q ss_pred EEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCC-CCCEEEcccccccccCCccccCCCcCCeeccccc
Q 046589 206 LDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQ-SLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGIN 284 (729)
Q Consensus 206 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n 284 (729)
|+|++|.+++.+|..++.+++|++|++++|.+++.+| ..+..++ +|++|++++|.+++.+|..
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~~L~~L~L~~N~l~~~~~~~--------------- 193 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP-DSYGSFSKLFTSMTISRNRLTGKIPPT--------------- 193 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECC-GGGGCCCTTCCEEECCSSEEEEECCGG---------------
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCC-HHHhhhhhcCcEEECcCCeeeccCChH---------------
Confidence 7777776666666666666666666666666554444 3344444 5555555555544333332
Q ss_pred cccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecC
Q 046589 285 QFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSN 364 (729)
Q Consensus 285 ~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~ 364 (729)
+..+. |+.|++++|.+.+..|..+..+++|++|+|++
T Consensus 194 ------------------------------------------~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 230 (313)
T 1ogq_A 194 ------------------------------------------FANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAK 230 (313)
T ss_dssp ------------------------------------------GGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCS
T ss_pred ------------------------------------------HhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCC
Confidence 22333 67788888888888888899999999999999
Q ss_pred CCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCc-cc
Q 046589 365 NKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNF-FN 443 (729)
Q Consensus 365 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~ 443 (729)
|++++.+|. +..+++|++|++++|.+++.+|..+ ..+++|++|+|++|++++.+|.. ..+++|+.|++++|. +.
T Consensus 231 N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l---~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc 305 (313)
T 1ogq_A 231 NSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGL---TQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLC 305 (313)
T ss_dssp SEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGG---GGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEE
T ss_pred CceeeecCc-ccccCCCCEEECcCCcccCcCChHH---hcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCcc
Confidence 999976665 8889999999999999998888776 45678999999999999999886 889999999999998 44
Q ss_pred c
Q 046589 444 G 444 (729)
Q Consensus 444 ~ 444 (729)
|
T Consensus 306 ~ 306 (313)
T 1ogq_A 306 G 306 (313)
T ss_dssp S
T ss_pred C
Confidence 3
No 47
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.3e-33 Score=314.27 Aligned_cols=388 Identities=21% Similarity=0.151 Sum_probs=261.6
Q ss_pred CCcEEEEcCCCCCcCcC-CccCCCCCCCcEEECCCCCCCCC----CcccccCCCCCCEEeccCCcCcccCCcccc-CCC-
Q 046589 105 LRVVYQVLRTQSLKGPV-SPLLFDLSKLRVLNLSQNLLFGQ----PSPQVSNLKRLKMLSLGENQLSGSLPSQLG-VLT- 177 (729)
Q Consensus 105 ~~~~~l~l~~~~l~~~~-~~~l~~L~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-~L~- 177 (729)
.+++.++++++.++... ...+..+++|++|+|++|.++.. .+..+..+++|++|+|++|.+++..+..+. .+.
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 45677888887776542 23356677888888888887642 345567778888888888887654444332 344
Q ss_pred ---CCcEEEeeccCCCc----cCCccccCCCCCcEEEccCCCCCCCCccccC-----CCCCCCeeeccCCcCCCCCC---
Q 046589 178 ---WLETLSLCSNSFTG----EMPSELGDMKQLKSLDFSGNGFNGTVPIRLG-----ELTRLQDLDLSDNLLSGSLT--- 242 (729)
Q Consensus 178 ---~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~-----~l~~L~~L~L~~N~l~~~~~--- 242 (729)
+|++|+|++|+++. .+|..+.++++|++|++++|.+++..+..+. ..++|++|++++|.+++...
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 58888888888773 4577778888888888888887644333322 24568888888887763221
Q ss_pred hhhhccCCCCCEEEcccccccccCCccccC-----CCcCCeeccccccccccccccccCCCCcccccccceeEEEEccCC
Q 046589 243 VSLFTNLQSLSYLDVSNNLLSGNIPPEISH-----LKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMN 317 (729)
Q Consensus 243 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~-----l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n 317 (729)
...+..+++|++|++++|.+.+..+..+.. .++|+.++++.|.+++....
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~------------------------- 217 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCR------------------------- 217 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHH-------------------------
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHH-------------------------
Confidence 234556678888888887776543333322 34566666665554421100
Q ss_pred CCCCCcchhcCCCCCCCEEEccCCcceecC-----CCCCcCCCCCcEEEecCCCCCCC----CcccccCCCCCcEEEcCC
Q 046589 318 QLSGPLPSWLGKWNQMESVWLNNNQFIGRI-----PLEVGNCSMLKYIRLSNNKLSGS----IPRELNDSESLVEINLDG 388 (729)
Q Consensus 318 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-----p~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~ 388 (729)
.++..+..+++|++|++++|.+.+.. +..+..+++|++|++++|+++.. ++..+..+++|++|++++
T Consensus 218 ----~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~ 293 (461)
T 1z7x_W 218 ----DLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAG 293 (461)
T ss_dssp ----HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTT
T ss_pred ----HHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCC
Confidence 13556667788899999999876532 22233578999999999998864 566777789999999999
Q ss_pred CCCCCCcccccccc--CCCCCCcEEEcCCCcCccc----CCcccCCCCCCCEEEccCCccccccCcCccC-----CCCCC
Q 046589 389 NMLSGTIEDVFGRC--TNLSQLEKLDLSSNMLTGR----IPKEIGNLRSIQILKLNSNFFNGSIPMRLGD-----STSLN 457 (729)
Q Consensus 389 N~l~~~~~~~~~~~--~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~ 457 (729)
|.+++.....+... ...++|++|++++|.+++. ++..+..+++|++|++++|.+++..+..+.. .++|+
T Consensus 294 n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~ 373 (461)
T 1z7x_W 294 NELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLR 373 (461)
T ss_dssp CCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCC
T ss_pred CCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceE
Confidence 98865433333221 2335899999999999865 4667778899999999999988655444432 67899
Q ss_pred EEEcccccCCc----cCchhhhcCCCCCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecCCCcCcc
Q 046589 458 ILELGNNNLNG----SIPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSG 528 (729)
Q Consensus 458 ~L~Ls~N~l~~----~~p~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g 528 (729)
.|+|++|++++ .+|..+..+++|++||+++|++++.-...+...+ + ....+++.|++..+.+..
T Consensus 374 ~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l-----~--~~~~~L~~L~~~~~~~~~ 441 (461)
T 1z7x_W 374 VLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV-----R--QPGCLLEQLVLYDIYWSE 441 (461)
T ss_dssp EEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHH-----T--STTCCCCEEECTTCCCCH
T ss_pred EEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHh-----c--cCCcchhheeecccccCH
Confidence 99999999986 7888888999999999999998753222211100 0 122356677776666553
No 48
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=2.7e-33 Score=311.64 Aligned_cols=369 Identities=19% Similarity=0.146 Sum_probs=218.0
Q ss_pred CCCcEEECCCCCCCCCCccc-ccCCCCCCEEeccCCcCcc----cCCccccCCCCCcEEEeeccCCCccCCccc-cCCC-
Q 046589 129 SKLRVLNLSQNLLFGQPSPQ-VSNLKRLKMLSLGENQLSG----SLPSQLGVLTWLETLSLCSNSFTGEMPSEL-GDMK- 201 (729)
Q Consensus 129 ~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~----~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l-~~l~- 201 (729)
++|++|||++|+++...... +..+++|++|+|++|.+++ .++..+..+++|++|+|++|.++...+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 46778888888776544333 5667788888888888764 345566677778888888777764333332 2333
Q ss_pred ---CCcEEEccCCCCCC----CCccccCCCCCCCeeeccCCcCCCCCCh----hhhccCCCCCEEEcccccccccCCccc
Q 046589 202 ---QLKSLDFSGNGFNG----TVPIRLGELTRLQDLDLSDNLLSGSLTV----SLFTNLQSLSYLDVSNNLLSGNIPPEI 270 (729)
Q Consensus 202 ---~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~p~~l 270 (729)
+|++|+|++|.++. .++..+..+++|++|++++|.++...+. ..+...++|++|++++|.+++..+..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~- 161 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP- 161 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH-
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH-
Confidence 57777777777763 3466677777777777777766421111 11122445666666666655422110
Q ss_pred cCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCC
Q 046589 271 SHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLE 350 (729)
Q Consensus 271 ~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~ 350 (729)
++..+..+++|++|++++|.+.+..+..
T Consensus 162 ----------------------------------------------------l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 189 (461)
T 1z7x_W 162 ----------------------------------------------------LASVLRAKPDFKELTVSNNDINEAGVRV 189 (461)
T ss_dssp ----------------------------------------------------HHHHHHHCTTCCEEECCSSBCHHHHHHH
T ss_pred ----------------------------------------------------HHHHHhhCCCCCEEECcCCCcchHHHHH
Confidence 1122223344444555554443221111
Q ss_pred Cc-----CCCCCcEEEecCCCCCCC----CcccccCCCCCcEEEcCCCCCCCCcccccc--ccCCCCCCcEEEcCCCcCc
Q 046589 351 VG-----NCSMLKYIRLSNNKLSGS----IPRELNDSESLVEINLDGNMLSGTIEDVFG--RCTNLSQLEKLDLSSNMLT 419 (729)
Q Consensus 351 l~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~~~~l~~L~~L~Ls~N~l~ 419 (729)
+. ..++|++|++++|++++. ++..+..+++|+.|++++|.+++.....+. ....+++|++|++++|.++
T Consensus 190 l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~ 269 (461)
T 1z7x_W 190 LCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGIT 269 (461)
T ss_dssp HHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred HHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCC
Confidence 11 134666666666666543 355555666777777777765432111110 1123566777888877777
Q ss_pred cc----CCcccCCCCCCCEEEccCCccccccCcCcc-----CCCCCCEEEcccccCCcc----CchhhhcCCCCCEEeCC
Q 046589 420 GR----IPKEIGNLRSIQILKLNSNFFNGSIPMRLG-----DSTSLNILELGNNNLNGS----IPEKIADLAQLQFLDLS 486 (729)
Q Consensus 420 ~~----~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~LdLs 486 (729)
+. ++..+..+++|++|++++|.+.+..+..+. ..++|+.|++++|.+++. ++..+..+++|+.||++
T Consensus 270 ~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls 349 (461)
T 1z7x_W 270 AKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQIS 349 (461)
T ss_dssp HHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECC
T ss_pred HHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEcc
Confidence 53 456666677888888888877644332222 235788888888888755 45666777888888888
Q ss_pred CCcCcccccccccccccccCCCCcccCCCCCeEecCCCcCcccCCchhhccccccccccccccccccCCceeeccCCcce
Q 046589 487 YNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVVLTGYIPRSLGHLSCSVKLNLSGNKLS 566 (729)
Q Consensus 487 ~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~ll~g~ip~~~~~l~~L~~L~Ls~N~l~ 566 (729)
+|.+++..+..+...+. ...++|+.|++++|++++.- ...+|..+..+++|++||+++|+++
T Consensus 350 ~n~i~~~~~~~l~~~l~-------~~~~~L~~L~L~~n~i~~~~-----------~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 350 NNRLEDAGVRELCQGLG-------QPGSVLRVLWLADCDVSDSS-----------CSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp SSBCHHHHHHHHHHHHT-------STTCCCCEEECTTSCCCHHH-----------HHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred CCccccccHHHHHHHHc-------CCCCceEEEECCCCCCChhh-----------HHHHHHHHHhCCCccEEECCCCCCC
Confidence 88877543333221110 01457888888888776310 0134556667788888888888887
Q ss_pred ee
Q 046589 567 VL 568 (729)
Q Consensus 567 ~~ 568 (729)
..
T Consensus 412 ~~ 413 (461)
T 1z7x_W 412 DA 413 (461)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 49
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.7e-28 Score=262.99 Aligned_cols=284 Identities=20% Similarity=0.170 Sum_probs=162.7
Q ss_pred CCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEE
Q 046589 128 LSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLD 207 (729)
Q Consensus 128 L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 207 (729)
.+...+.+.++|.++.++. .+. ++|++|++++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|+
T Consensus 30 C~~~~~c~~~~~~l~~iP~-~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 30 CDRNGICKGSSGSLNSIPS-GLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp ECTTSEEECCSTTCSSCCT-TCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCeEeeCCCCCcccccc-ccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 3444557777777776543 222 3677777777777755555677777777777777777766666677777777777
Q ss_pred ccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCCh-hhhccCCCCCEEEccccc-ccccCCccccCCCcCCeecccccc
Q 046589 208 FSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTV-SLFTNLQSLSYLDVSNNL-LSGNIPPEISHLKKLSDHYLGINQ 285 (729)
Q Consensus 208 Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~l~l~~n~ 285 (729)
+++|.+++..+..++++++|++|++++|.++ .++. ..|..+++|++|++++|. +....
T Consensus 107 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~------------------- 166 (353)
T 2z80_A 107 LSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQ------------------- 166 (353)
T ss_dssp CCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEEC-------------------
T ss_pred CCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccC-------------------
Confidence 7777776444444666666666666666665 3443 345556666666665552 22211
Q ss_pred ccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCC
Q 046589 286 FTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNN 365 (729)
Q Consensus 286 l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N 365 (729)
+..+..+++|++|++++|++.+..|..+..+++|++|++++|
T Consensus 167 --------------------------------------~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n 208 (353)
T 2z80_A 167 --------------------------------------RKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMK 208 (353)
T ss_dssp --------------------------------------TTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECS
T ss_pred --------------------------------------HHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCC
Confidence 223344455666666666666666777777777777888777
Q ss_pred CCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccc
Q 046589 366 KLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGS 445 (729)
Q Consensus 366 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 445 (729)
+++...+..+..+++|+.|++++|.+++.....+........++.++++++.+++. .+. .
T Consensus 209 ~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~-------------------~l~-~ 268 (353)
T 2z80_A 209 QHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE-------------------SLF-Q 268 (353)
T ss_dssp CSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHH-------------------HHH-H
T ss_pred ccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCc-------------------chh-h
Confidence 77543333344566777777777776655444333333334455555555544431 000 2
Q ss_pred cCcCccCCCCCCEEEcccccCCccCchh-hhcCCCCCEEeCCCCcCccc
Q 046589 446 IPMRLGDSTSLNILELGNNNLNGSIPEK-IADLAQLQFLDLSYNNLSRP 493 (729)
Q Consensus 446 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~LdLs~N~l~~~ 493 (729)
+|.++..+++|+.|+|++|+++ .+|.. +..+++|++|++++|++++.
T Consensus 269 l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 269 VMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp HHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred hHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 3444445555555555555555 23332 35555555555555555543
No 50
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=2.1e-27 Score=249.16 Aligned_cols=264 Identities=24% Similarity=0.231 Sum_probs=129.0
Q ss_pred CCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCc--cCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeee
Q 046589 154 RLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTG--EMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLD 231 (729)
Q Consensus 154 ~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 231 (729)
+|++|+|++|+++...+..|..+++|++|+|++|+++. ..|..+..+++|++|++++|.+. .+|..+..+++|++|+
T Consensus 29 ~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~ 107 (306)
T 2z66_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLD 107 (306)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEE
T ss_pred CCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEE
Confidence 44455555555442222234445555555555554441 12334444555555555555554 3444455555555555
Q ss_pred ccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeeccccccccccccccccCCCCcccccccceeEE
Q 046589 232 LSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFT 311 (729)
Q Consensus 232 L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~ 311 (729)
+++|.+++..+...+..+++|++|++++|.+.+..+..+..+++|+.++++.|.+++.
T Consensus 108 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---------------------- 165 (306)
T 2z66_A 108 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN---------------------- 165 (306)
T ss_dssp CTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG----------------------
T ss_pred CCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc----------------------
Confidence 5555554222223455556666666666555544444444444444444444333210
Q ss_pred EEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCC
Q 046589 312 FSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNML 391 (729)
Q Consensus 312 l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 391 (729)
.+|..+..+++|++|++++|++++..|..+..+++|+.|++++|.+
T Consensus 166 ----------------------------------~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 211 (306)
T 2z66_A 166 ----------------------------------FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211 (306)
T ss_dssp ----------------------------------EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred ----------------------------------cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCcc
Confidence 2333334444444444444444443344444444444444444444
Q ss_pred CCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCC-CCCEEEccCCccccccCc--CccCCCCCCEEEcccccCCc
Q 046589 392 SGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLR-SIQILKLNSNFFNGSIPM--RLGDSTSLNILELGNNNLNG 468 (729)
Q Consensus 392 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~ 468 (729)
++..+..+ ..+++|++|++++|++++..|..+..++ +|++|++++|.+++..+. ....+...+.+....+.+..
T Consensus 212 ~~~~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C 288 (306)
T 2z66_A 212 FSLDTFPY---KCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMEC 288 (306)
T ss_dssp SBCCSGGG---TTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBE
T ss_pred CccChhhc---cCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhcccccccc
Confidence 44333332 3345566666666666666666666663 677777777776643221 01122233344555666666
Q ss_pred cCchhhhcC
Q 046589 469 SIPEKIADL 477 (729)
Q Consensus 469 ~~p~~l~~l 477 (729)
..|..+.+.
T Consensus 289 ~~p~~~~g~ 297 (306)
T 2z66_A 289 ATPSDKQGM 297 (306)
T ss_dssp EESGGGTTC
T ss_pred CCchhhCCc
Confidence 667666543
No 51
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=3.2e-27 Score=247.85 Aligned_cols=280 Identities=18% Similarity=0.159 Sum_probs=197.4
Q ss_pred CEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCCCCCCC--CccccCCCCCCCeeecc
Q 046589 156 KMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGT--VPIRLGELTRLQDLDLS 233 (729)
Q Consensus 156 ~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~p~~l~~l~~L~~L~L~ 233 (729)
+.++.+++.++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|.++.. .|..+..+++|++|+++
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 45666666665 4555432 4666666666666643333456666666666666666521 13334444555555555
Q ss_pred CCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeeccccccccccccccccCCCCcccccccceeEEEE
Q 046589 234 DNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFS 313 (729)
Q Consensus 234 ~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~ 313 (729)
+|.+ . .+|..+..+++|+.++++.|.+++..+
T Consensus 87 ~n~i-------------------------~-~l~~~~~~l~~L~~L~l~~n~l~~~~~---------------------- 118 (306)
T 2z66_A 87 FNGV-------------------------I-TMSSNFLGLEQLEHLDFQHSNLKQMSE---------------------- 118 (306)
T ss_dssp SCSE-------------------------E-EEEEEEETCTTCCEEECTTSEEESSTT----------------------
T ss_pred CCcc-------------------------c-cChhhcCCCCCCCEEECCCCccccccc----------------------
Confidence 5544 4 233444455555555555544432110
Q ss_pred ccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCC-CCcccccCCCCCcEEEcCCCCCC
Q 046589 314 AGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSG-SIPRELNDSESLVEINLDGNMLS 392 (729)
Q Consensus 314 l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~ 392 (729)
+..+..+++|++|++++|.+.+..+..+..+++|++|++++|.+++ .+|..+..+++|+.|++++|.++
T Consensus 119 ----------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~ 188 (306)
T 2z66_A 119 ----------FSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE 188 (306)
T ss_dssp ----------TTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCC
T ss_pred ----------chhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcC
Confidence 1234556788899999999988888889999999999999999986 57888999999999999999999
Q ss_pred CCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCC-CCCEEEcccccCCccCc
Q 046589 393 GTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDST-SLNILELGNNNLNGSIP 471 (729)
Q Consensus 393 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p 471 (729)
+..+..+ ..+++|++|+|++|++++..+..+..+++|++|++++|++++..|..+..++ +|+.|+|++|.+++..+
T Consensus 189 ~~~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 189 QLSPTAF---NSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp EECTTTT---TTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred CcCHHHh---cCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 8777665 4577899999999999988788899999999999999999999999999884 99999999999986543
Q ss_pred --hhhhcCCCCCEEeCCCCcCccccccccc
Q 046589 472 --EKIADLAQLQFLDLSYNNLSRPILSKHS 499 (729)
Q Consensus 472 --~~l~~l~~L~~LdLs~N~l~~~~~~~~~ 499 (729)
.....+...+.+.+..+.+....|....
T Consensus 266 ~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~ 295 (306)
T 2z66_A 266 HQSFLQWIKDQRQLLVEVERMECATPSDKQ 295 (306)
T ss_dssp GHHHHHHHHHTGGGBSCGGGCBEEESGGGT
T ss_pred hHHHHHHHHhhhhhhccccccccCCchhhC
Confidence 1122333445566677777766665543
No 52
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=9.7e-27 Score=246.40 Aligned_cols=224 Identities=23% Similarity=0.288 Sum_probs=115.6
Q ss_pred CCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEc
Q 046589 129 SKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDF 208 (729)
Q Consensus 129 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 208 (729)
+++++|+|++|.++. +|+.+.++++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..+.++++|++|++
T Consensus 81 ~~l~~L~L~~n~l~~-lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLPQ-FPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCSS-CCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCchh-cChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 344555555555442 2333444555555555555554 45555555555555555555554 44555555555555555
Q ss_pred cCCCCCCCCccccCC---------CCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCee
Q 046589 209 SGNGFNGTVPIRLGE---------LTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDH 279 (729)
Q Consensus 209 s~N~l~~~~p~~l~~---------l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l 279 (729)
++|++.+.+|..++. +++|++|++++|.++ .+| ..+..+++|++|++++|.+++ +|..+..+++|+.+
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp-~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLP-ASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCC-GGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cch-HhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEE
Confidence 555444444444332 455555555555544 344 234445555555555555442 33334444444444
Q ss_pred ccccccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcE
Q 046589 280 YLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKY 359 (729)
Q Consensus 280 ~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 359 (729)
++++|.+. +.+|.+++.+++|+.|++++|.+.+.+|..+..+++|++
T Consensus 235 ~Ls~n~~~---------------------------------~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~ 281 (328)
T 4fcg_A 235 DLRGCTAL---------------------------------RNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEK 281 (328)
T ss_dssp ECTTCTTC---------------------------------CBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCE
T ss_pred ECcCCcch---------------------------------hhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCE
Confidence 43333322 223333444555566666666666666666666666666
Q ss_pred EEecCCCCCCCCcccccCCCCCcEEEcCCCCC
Q 046589 360 IRLSNNKLSGSIPRELNDSESLVEINLDGNML 391 (729)
Q Consensus 360 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 391 (729)
|+|++|++.+.+|..+..+++|+.+++..+.+
T Consensus 282 L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 282 LDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp EECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred EeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 66666666666666666666666666655443
No 53
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.94 E-value=4e-27 Score=252.35 Aligned_cols=276 Identities=20% Similarity=0.222 Sum_probs=215.5
Q ss_pred EEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccC
Q 046589 109 YQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNS 188 (729)
Q Consensus 109 ~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~ 188 (729)
..+.+++.++ .+|..+. ++|++|++++|.+++.++..|.++++|++|+|++|++++..|..|+.+++|++|+|++|+
T Consensus 35 ~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 111 (353)
T 2z80_A 35 ICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNY 111 (353)
T ss_dssp EEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCc
Confidence 3677778877 4666554 589999999999999888899999999999999999998888899999999999999999
Q ss_pred CCccCCccccCCCCCcEEEccCCCCCCCCc-cccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCC
Q 046589 189 FTGEMPSELGDMKQLKSLDFSGNGFNGTVP-IRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIP 267 (729)
Q Consensus 189 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 267 (729)
+++..+..|.++++|++|++++|+++...+ ..+..+++|++|++++|...+.++...|..+++|++|++++|.+++..|
T Consensus 112 l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 191 (353)
T 2z80_A 112 LSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEP 191 (353)
T ss_dssp CSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECT
T ss_pred CCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCH
Confidence 996555569999999999999999985444 4799999999999999953336666788999999999999999998889
Q ss_pred ccccCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecC
Q 046589 268 PEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRI 347 (729)
Q Consensus 268 ~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 347 (729)
..+..+++|+.++++.|.++.. +.. .+..+++|+.|++++|.+.+..
T Consensus 192 ~~l~~l~~L~~L~l~~n~l~~~-~~~--------------------------------~~~~~~~L~~L~L~~n~l~~~~ 238 (353)
T 2z80_A 192 KSLKSIQNVSHLILHMKQHILL-LEI--------------------------------FVDVTSSVECLELRDTDLDTFH 238 (353)
T ss_dssp TTTTTCSEEEEEEEECSCSTTH-HHH--------------------------------HHHHTTTEEEEEEESCBCTTCC
T ss_pred HHHhccccCCeecCCCCccccc-hhh--------------------------------hhhhcccccEEECCCCcccccc
Confidence 9999999999998888876422 111 1223455666666666665443
Q ss_pred CCCC---cCCCCCcEEEecCCCCCC----CCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcc
Q 046589 348 PLEV---GNCSMLKYIRLSNNKLSG----SIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTG 420 (729)
Q Consensus 348 p~~l---~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 420 (729)
+..+ ...+.++.++|+++.+.+ .+|..+..+++|+.|++++|+++..++..| ..+++|++|+|++|.+.+
T Consensus 239 ~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~---~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 239 FSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIF---DRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp CC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTT---TTCTTCCEEECCSSCBCC
T ss_pred ccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHH---hcCCCCCEEEeeCCCccC
Confidence 3322 234567788888887765 356677888888888888888886555444 456778888888888876
Q ss_pred cCC
Q 046589 421 RIP 423 (729)
Q Consensus 421 ~~p 423 (729)
..|
T Consensus 316 ~~~ 318 (353)
T 2z80_A 316 SCP 318 (353)
T ss_dssp CHH
T ss_pred cCC
Confidence 443
No 54
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=4.8e-26 Score=252.44 Aligned_cols=246 Identities=25% Similarity=0.268 Sum_probs=139.4
Q ss_pred EEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccC
Q 046589 109 YQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNS 188 (729)
Q Consensus 109 ~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~ 188 (729)
.++.++..++ .+|..+. +++++|+|++|.++++.+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 58 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 58 KVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 3455555554 3444332 466677777777666666666666677777777776666666666666667777777766
Q ss_pred CCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCc
Q 046589 189 FTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPP 268 (729)
Q Consensus 189 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 268 (729)
+++..+..|.++++|++|+|++|.++...+..|.++++|++|++++|...+.++...|..+++|++|++++|++++. |
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~- 212 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P- 212 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-
Confidence 66555555666666667776666666555556666666666666664333355555566666666666666665532 2
Q ss_pred cccCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCC
Q 046589 269 EISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIP 348 (729)
Q Consensus 269 ~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p 348 (729)
.+..++ +|+.|++++|++.+..|
T Consensus 213 ~~~~l~---------------------------------------------------------~L~~L~Ls~N~l~~~~~ 235 (452)
T 3zyi_A 213 NLTPLV---------------------------------------------------------GLEELEMSGNHFPEIRP 235 (452)
T ss_dssp CCTTCT---------------------------------------------------------TCCEEECTTSCCSEECG
T ss_pred cccccc---------------------------------------------------------cccEEECcCCcCcccCc
Confidence 233333 44444444444444444
Q ss_pred CCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCc
Q 046589 349 LEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLT 419 (729)
Q Consensus 349 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 419 (729)
..|..+++|++|+|++|++++..|..|..+++|+.|+|++|++++.++..| ..+++|+.|+|++|.+.
T Consensus 236 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 236 GSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLF---TPLRYLVELHLHHNPWN 303 (452)
T ss_dssp GGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSS---TTCTTCCEEECCSSCEE
T ss_pred ccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHh---ccccCCCEEEccCCCcC
Confidence 444444555555555555544444445555555555555555554444333 23344555555555544
No 55
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.94 E-value=2.4e-26 Score=243.31 Aligned_cols=228 Identities=20% Similarity=0.270 Sum_probs=159.7
Q ss_pred CCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCee
Q 046589 151 NLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDL 230 (729)
Q Consensus 151 ~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 230 (729)
...+++.|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3578999999999998 88999999999999999999998 89999999999999999999998 789899999999999
Q ss_pred eccCCcCCCCCChhh--------hccCCCCCEEEcccccccccCCccccCCCcCCeeccccccccccccccccCCCCccc
Q 046589 231 DLSDNLLSGSLTVSL--------FTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKS 302 (729)
Q Consensus 231 ~L~~N~l~~~~~~~~--------~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~ 302 (729)
++++|++.+.+|... |..+++|++|++++|.++ .+|..++.+++|+.++++
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~-------------------- 214 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIR-------------------- 214 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEE--------------------
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEcc--------------------
Confidence 999988877777332 223666666666666655 455555555555444444
Q ss_pred ccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCc
Q 046589 303 VLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLV 382 (729)
Q Consensus 303 ~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 382 (729)
+|++.+ +|..+..+++|++|+|++|++.+.+|..+..+++|+
T Consensus 215 -------------------------------------~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~ 256 (328)
T 4fcg_A 215 -------------------------------------NSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256 (328)
T ss_dssp -------------------------------------SSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCC
T ss_pred -------------------------------------CCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCC
Confidence 444432 223344445555555555555555555555555555
Q ss_pred EEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccc
Q 046589 383 EINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFN 443 (729)
Q Consensus 383 ~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 443 (729)
.|++++|.+.+.+|..+ .++++|++|+|++|++.+.+|..+..+++|+.+++..+.+.
T Consensus 257 ~L~L~~n~~~~~~p~~~---~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 257 RLILKDCSNLLTLPLDI---HRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp EEECTTCTTCCBCCTTG---GGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred EEECCCCCchhhcchhh---hcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 55555555555555443 33456667777777777777777777777777777766554
No 56
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=6e-26 Score=250.74 Aligned_cols=246 Identities=23% Similarity=0.280 Sum_probs=143.4
Q ss_pred EEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccC
Q 046589 109 YQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNS 188 (729)
Q Consensus 109 ~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~ 188 (729)
.++.+...++ .+|..+. +++++|+|++|+++++.+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|+
T Consensus 47 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 47 KVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 3444444444 3443332 455666666666665555556666666666666666655555556666666666666666
Q ss_pred CCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCc
Q 046589 189 FTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPP 268 (729)
Q Consensus 189 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 268 (729)
++...+..|.++++|++|+|++|.++...+..|..+++|++|++++|...+.++...|..+++|++|++++|.++. +|
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~- 201 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP- 201 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-
Confidence 6544444555666666666666665544444555555566665555333334444445555555555555554441 11
Q ss_pred cccCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCC
Q 046589 269 EISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIP 348 (729)
Q Consensus 269 ~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p 348 (729)
. +..+++|+.|++++|++.+..|
T Consensus 202 ~---------------------------------------------------------~~~l~~L~~L~Ls~N~l~~~~~ 224 (440)
T 3zyj_A 202 N---------------------------------------------------------LTPLIKLDELDLSGNHLSAIRP 224 (440)
T ss_dssp C---------------------------------------------------------CTTCSSCCEEECTTSCCCEECT
T ss_pred c---------------------------------------------------------cCCCcccCEEECCCCccCccCh
Confidence 1 2334556666666666666666
Q ss_pred CCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCc
Q 046589 349 LEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLT 419 (729)
Q Consensus 349 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 419 (729)
..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++.++..| ..+++|+.|+|++|.+.
T Consensus 225 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 225 GSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLF---TPLHHLERIHLHHNPWN 292 (440)
T ss_dssp TTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTT---SSCTTCCEEECCSSCEE
T ss_pred hhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHh---ccccCCCEEEcCCCCcc
Confidence 666667777777777777766666666677777777777777766655554 34556777777777665
No 57
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.94 E-value=1.4e-29 Score=290.80 Aligned_cols=409 Identities=16% Similarity=0.085 Sum_probs=275.1
Q ss_pred CccCCCCCCCcEEECCCCCCC---CCCccccc------------CCCCCCEEeccCCcCcccCCccccCC--CCCcEEEe
Q 046589 122 SPLLFDLSKLRVLNLSQNLLF---GQPSPQVS------------NLKRLKMLSLGENQLSGSLPSQLGVL--TWLETLSL 184 (729)
Q Consensus 122 ~~~l~~L~~L~~L~Ls~N~l~---~~~~~~~~------------~l~~L~~L~Ls~N~l~~~~p~~l~~L--~~L~~L~L 184 (729)
+..+..+++|++|+|+++... +..|..++ .+++|++|+|++|.+++..+..++.. .+|++|+|
T Consensus 66 ~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L 145 (592)
T 3ogk_B 66 DRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKL 145 (592)
T ss_dssp HHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEE
T ss_pred HHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEEC
Confidence 344566788999998775421 22222222 68899999999998887767667664 45999999
Q ss_pred eccCC-Cc-cCCccccCCCCCcEEEccCCCCCCC----CccccCCCCCCCeeeccCCcCCCCCC---hhhhccCCCCCEE
Q 046589 185 CSNSF-TG-EMPSELGDMKQLKSLDFSGNGFNGT----VPIRLGELTRLQDLDLSDNLLSGSLT---VSLFTNLQSLSYL 255 (729)
Q Consensus 185 s~N~l-~~-~~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~~---~~~~~~l~~L~~L 255 (729)
++|.- +. .++....++++|++|+|++|.+++. ++..+..+++|++|++++|.+++.-. ...+..+++|++|
T Consensus 146 ~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L 225 (592)
T 3ogk_B 146 DKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSV 225 (592)
T ss_dssp ESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEE
T ss_pred cCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEE
Confidence 98862 21 1222334788999999999987655 33445678899999999998862111 2345678999999
Q ss_pred EcccccccccCCccccCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCE
Q 046589 256 DVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMES 335 (729)
Q Consensus 256 ~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~ 335 (729)
++++|.+.+ +|..+..+++|+.+.++.... ..+ .+..+..+..+++|+.
T Consensus 226 ~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~--~~~----------------------------~~~~~~~l~~~~~L~~ 274 (592)
T 3ogk_B 226 KVGDFEILE-LVGFFKAAANLEEFCGGSLNE--DIG----------------------------MPEKYMNLVFPRKLCR 274 (592)
T ss_dssp ECSSCBGGG-GHHHHHHCTTCCEEEECBCCC--CTT----------------------------CTTSSSCCCCCTTCCE
T ss_pred eccCccHHH-HHHHHhhhhHHHhhccccccc--ccc----------------------------hHHHHHHhhccccccc
Confidence 999998875 667788888888887764211 100 0122334455677777
Q ss_pred EEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCc-ccccCCCCCcEEEcCCCCCCC-CccccccccCCCCCCcEEEc
Q 046589 336 VWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIP-RELNDSESLVEINLDGNMLSG-TIEDVFGRCTNLSQLEKLDL 413 (729)
Q Consensus 336 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~~~~l~~L~~L~L 413 (729)
|+++++. ...+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++ +.+.. .++... ..+++|++|++
T Consensus 275 L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~---~~~~~L~~L~L 349 (592)
T 3ogk_B 275 LGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLA---QYCKQLKRLRI 349 (592)
T ss_dssp EEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHH---HHCTTCCEEEE
T ss_pred cCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHH---HhCCCCCEEEe
Confidence 8777653 23455666777888888888888654333 335678888888887 33321 111121 34567888888
Q ss_pred C-----------CCcCccc-CCcccCCCCCCCEEEccCCccccccCcCccC-CCCCCEEEcc----cccCCcc-----Cc
Q 046589 414 S-----------SNMLTGR-IPKEIGNLRSIQILKLNSNFFNGSIPMRLGD-STSLNILELG----NNNLNGS-----IP 471 (729)
Q Consensus 414 s-----------~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~p 471 (729)
+ .|.+++. ++.....+++|++|+++.|.+++..+..++. +++|+.|+++ .|.+++. ++
T Consensus 350 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~ 429 (592)
T 3ogk_B 350 ERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVR 429 (592)
T ss_dssp ECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHH
T ss_pred ecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHH
Confidence 8 3566543 2233456888999999888888776666655 7889999996 6778763 44
Q ss_pred hhhhcCCCCCEEeCCCCc--CcccccccccccccccCCCCcccCCCCCeEecCCCcCcccCCchhhcccccccccccccc
Q 046589 472 EKIADLAQLQFLDLSYNN--LSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVVLTGYIPRSL 549 (729)
Q Consensus 472 ~~l~~l~~L~~LdLs~N~--l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~ll~g~ip~~~ 549 (729)
..+..+++|+.|+++++. +++..+.... ..+++|+.|++++|++++. .++..+
T Consensus 430 ~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~-----------~~~~~L~~L~L~~n~l~~~--------------~~~~~~ 484 (592)
T 3ogk_B 430 SLLIGCKKLRRFAFYLRQGGLTDLGLSYIG-----------QYSPNVRWMLLGYVGESDE--------------GLMEFS 484 (592)
T ss_dssp HHHHHCTTCCEEEEECCGGGCCHHHHHHHH-----------HSCTTCCEEEECSCCSSHH--------------HHHHHH
T ss_pred HHHHhCCCCCEEEEecCCCCccHHHHHHHH-----------HhCccceEeeccCCCCCHH--------------HHHHHH
Confidence 456778899999997543 5543333222 1467788999999887642 223344
Q ss_pred ccccCCceeeccCCcceeec-ccccccccccccccCCcccccC
Q 046589 550 GHLSCSVKLNLSGNKLSVLV-PTSFGNLNGLTNLDLSYNEFDG 591 (729)
Q Consensus 550 ~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~g 591 (729)
..+++|++|++++|.++... +.....+++|+.|++++|++++
T Consensus 485 ~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 485 RGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp TCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred hcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 56788999999999987553 3334568899999999998775
No 58
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=3.9e-25 Score=252.05 Aligned_cols=114 Identities=29% Similarity=0.338 Sum_probs=57.8
Q ss_pred CcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEee
Q 046589 106 RVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLC 185 (729)
Q Consensus 106 ~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls 185 (729)
.++.++++++.++ .+|..+. ++|++|+|++|.++.+++ .+++|++|+|++|+|+ .+|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC----CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC----cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECc
Confidence 3556666666665 4554443 566666666666554332 3455666666666555 3443 44555555555
Q ss_pred ccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCC
Q 046589 186 SNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLS 238 (729)
Q Consensus 186 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 238 (729)
+|++++ +|. .+++|++|++++|+++. +|.. +++|++|++++|.++
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~ 154 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLA 154 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCC
Confidence 555552 332 34455555555555542 3321 244444444444443
No 59
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=4.4e-25 Score=251.62 Aligned_cols=263 Identities=29% Similarity=0.334 Sum_probs=160.2
Q ss_pred CCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEc
Q 046589 129 SKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDF 208 (729)
Q Consensus 129 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 208 (729)
.++++|++++|.++.++ ..+. ++|++|+|++|.|+ .+|. .+++|++|+|++|+++ .+|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~~lp-~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLTTLP-DCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCSCCC-SCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcCccC-hhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEEC
Confidence 35899999999998654 4443 78999999999998 5666 5788999999999988 4665 6788999999
Q ss_pred cCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeeccccccccc
Q 046589 209 SGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTG 288 (729)
Q Consensus 209 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~ 288 (729)
++|.+++ +|. .+++|++|++++|+++ .+|. .+++|++|++++|.+++ +|.. +.+|+.++++.|.+++
T Consensus 109 s~N~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~----~l~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~ 175 (622)
T 3g06_A 109 FSNPLTH-LPA---LPSGLCKLWIFGNQLT-SLPV----LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS 175 (622)
T ss_dssp CSCCCCC-CCC---CCTTCCEEECCSSCCS-CCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred cCCcCCC-CCC---CCCCcCEEECCCCCCC-cCCC----CCCCCCEEECcCCcCCC-cCCc---cCCCCEEECCCCCCCC
Confidence 9999884 444 5678888888888887 4552 34788888888887764 3322 2334444444443321
Q ss_pred cccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCC
Q 046589 289 SIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLS 368 (729)
Q Consensus 289 ~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 368 (729)
+| ..+++|+.|++++|.+.+ +|.. +++|+.|++++|+++
T Consensus 176 ----------------------------------l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~ 214 (622)
T 3g06_A 176 ----------------------------------LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT 214 (622)
T ss_dssp ----------------------------------CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS
T ss_pred ----------------------------------Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc
Confidence 11 122445555555555443 2221 234555555555544
Q ss_pred CCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCc
Q 046589 369 GSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPM 448 (729)
Q Consensus 369 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 448 (729)
. +|.. +++|++|+|++|++++ +| ..+++|+.|++++|.++ .+|.
T Consensus 215 ~-l~~~------------------------------~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~ 258 (622)
T 3g06_A 215 S-LPAL------------------------------PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM 258 (622)
T ss_dssp S-CCCC------------------------------CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC
T ss_pred c-cCCC------------------------------CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc
Confidence 2 2211 2345555555555553 33 33455555555555555 3443
Q ss_pred CccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCcccccc
Q 046589 449 RLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLSRPILS 496 (729)
Q Consensus 449 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~~~~ 496 (729)
.+++|+.|+|++|+++ .+|..+..+++|+.|+|++|++++.+|.
T Consensus 259 ---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 259 ---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp ---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred ---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 3455666666666665 4555566666666666666666554444
No 60
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=1.4e-25 Score=247.68 Aligned_cols=250 Identities=20% Similarity=0.212 Sum_probs=189.5
Q ss_pred CCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEcc
Q 046589 130 KLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFS 209 (729)
Q Consensus 130 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 209 (729)
..+.++.+++.++.++. .+ .++++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~~iP~-~~--~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPD-GI--STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCSSCCS-CC--CTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcCcCCC-CC--CCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 45677777777766543 22 2467777888887776667777777777777777777776666777777777777777
Q ss_pred CCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeecccccccccc
Q 046589 210 GNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGS 289 (729)
Q Consensus 210 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~~ 289 (729)
+|+++...+..|..+++|++|+|++|.++ .++...|..+++|++|++++|+..+.+
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~l~~~~~l~~i----------------------- 176 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLSYI----------------------- 176 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTTCCEE-----------------------
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCccc-ccCHHHhhhCcccCEeCCCCCCCccee-----------------------
Confidence 77777555556777777777777777766 455455666666666666653211110
Q ss_pred ccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCC
Q 046589 290 IQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSG 369 (729)
Q Consensus 290 ~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 369 (729)
.+..+..+++|+.|++++|++.. +| .+..+++|++|+|++|++++
T Consensus 177 ---------------------------------~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~ 221 (440)
T 3zyj_A 177 ---------------------------------SEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSA 221 (440)
T ss_dssp ---------------------------------CTTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCE
T ss_pred ---------------------------------CcchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCc
Confidence 11234556778888888888873 44 47889999999999999999
Q ss_pred CCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCcccc
Q 046589 370 SIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNG 444 (729)
Q Consensus 370 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 444 (729)
..|..|..+++|+.|++++|.+++..+..| ..+++|++|+|++|++++..+..+..+++|+.|+|++|.+..
T Consensus 222 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 222 IRPGSFQGLMHLQKLWMIQSQIQVIERNAF---DNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEECTTSS---TTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred cChhhhccCccCCEEECCCCceeEEChhhh---cCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 889999999999999999999998877666 567789999999999998888889999999999999999863
No 61
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=1.2e-25 Score=249.09 Aligned_cols=250 Identities=20% Similarity=0.199 Sum_probs=195.6
Q ss_pred CCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEcc
Q 046589 130 KLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFS 209 (729)
Q Consensus 130 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 209 (729)
..+.++.+++.++.++. .+ .++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~~iP~-~~--~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQ-GI--PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCSSCCS-CC--CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcCccCC-CC--CCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 45677888777776543 22 2578888888888887778888888888888888888887777788888888888888
Q ss_pred CCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeecccccccccc
Q 046589 210 GNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGS 289 (729)
Q Consensus 210 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~~ 289 (729)
+|.++...+..|..+++|++|+|++|.++ .++...|..+++|++|++++|+..+.++
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~~~~l~~i~---------------------- 188 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKKLEYIS---------------------- 188 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTTCCEEC----------------------
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcc-eeCHhHHhcCCcccEEeCCCCCCccccC----------------------
Confidence 88887666666777888888888888776 5555667777777777776632211111
Q ss_pred ccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCC
Q 046589 290 IQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSG 369 (729)
Q Consensus 290 ~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 369 (729)
+..+..+++|+.|++++|++.+. | .+..+++|++|+|++|++++
T Consensus 189 ----------------------------------~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 189 ----------------------------------EGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp ----------------------------------TTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSE
T ss_pred ----------------------------------hhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcc
Confidence 12244566777888888877743 3 47788999999999999999
Q ss_pred CCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCcccc
Q 046589 370 SIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNG 444 (729)
Q Consensus 370 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 444 (729)
..|..|..+++|+.|++++|.+++..+..| ..+++|++|+|++|++++..+..+..+++|+.|+|++|.+..
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAF---DGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTT---TTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHh---cCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 889999999999999999999998877666 567789999999999998888889999999999999999863
No 62
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=5.1e-26 Score=236.11 Aligned_cols=255 Identities=22% Similarity=0.215 Sum_probs=149.7
Q ss_pred EEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeecc
Q 046589 108 VYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSN 187 (729)
Q Consensus 108 ~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N 187 (729)
+.++.+++.++ .+|..+ .++|++|++++|.+++.++..|.++++|++|+|++|.+++..|..|..+++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 34555555554 233322 345666666666666655555666666666666666666555566666666666666666
Q ss_pred C-CCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccC
Q 046589 188 S-FTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNI 266 (729)
Q Consensus 188 ~-l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 266 (729)
. +....|..|.++++|++|++++|.+++..|..+..+++|++|++++|.++ .++...|..+++|++|++++|++++..
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccc-ccCHhHhccCCCccEEECCCCcccccC
Confidence 5 55444555666666666666666665555555555555666655555554 333344455555555555555443221
Q ss_pred CccccCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceec
Q 046589 267 PPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGR 346 (729)
Q Consensus 267 p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 346 (729)
+ ..+..+++|+.|++++|.+.+.
T Consensus 170 ~---------------------------------------------------------~~~~~l~~L~~L~l~~n~l~~~ 192 (285)
T 1ozn_A 170 E---------------------------------------------------------RAFRGLHSLDRLLLHQNRVAHV 192 (285)
T ss_dssp T---------------------------------------------------------TTTTTCTTCCEEECCSSCCCEE
T ss_pred H---------------------------------------------------------HHhcCccccCEEECCCCccccc
Confidence 1 2234456667777777777777
Q ss_pred CCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCccc
Q 046589 347 IPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEI 426 (729)
Q Consensus 347 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l 426 (729)
.|..+..+++|++|++++|++++..+..+..+++|+.|++++|.+....+.... ...++.+..+.+.+....|..+
T Consensus 193 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~----~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 193 HPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPL----WAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHH----HHHHHHCCSEECCCBEEESGGG
T ss_pred CHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHH----HHHHHhcccccCccccCCchHh
Confidence 777777888888888888888876666777888888888888877654332110 0112333445555555555554
Q ss_pred C
Q 046589 427 G 427 (729)
Q Consensus 427 ~ 427 (729)
.
T Consensus 269 ~ 269 (285)
T 1ozn_A 269 A 269 (285)
T ss_dssp T
T ss_pred C
Confidence 3
No 63
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=1.5e-27 Score=251.10 Aligned_cols=257 Identities=18% Similarity=0.166 Sum_probs=184.6
Q ss_pred ccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCC-CCCChhhhc-------cCCCCCEEEcccccccccCCc
Q 046589 197 LGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLS-GSLTVSLFT-------NLQSLSYLDVSNNLLSGNIPP 268 (729)
Q Consensus 197 l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~p~ 268 (729)
++..++|++|++++|.+ .+|..+... |+.|++++|.++ ..++ ..+. .+++|++|++++|.+++.+|.
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~-~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIP-SRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECB-HHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcC-HHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 45556777777777777 566655543 777777777773 2333 2222 577888888888888877777
Q ss_pred cc--cCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceec
Q 046589 269 EI--SHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGR 346 (729)
Q Consensus 269 ~l--~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 346 (729)
.+ ..+++|+.++++.|++++. |..+..+.. ..+++|++|++++|++.+.
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~----------------------------~~~~~L~~L~L~~N~l~~~ 164 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQ----------------------------WLKPGLKVLSIAQAHSLNF 164 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHT----------------------------TCCTTCCEEEEESCSCCCC
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHH----------------------------hhcCCCcEEEeeCCCCccc
Confidence 65 7777788777777777654 332221100 0136788888888888887
Q ss_pred CCCCCcCCCCCcEEEecCCCCCCC--Ccccc--cCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccC
Q 046589 347 IPLEVGNCSMLKYIRLSNNKLSGS--IPREL--NDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRI 422 (729)
Q Consensus 347 ~p~~l~~l~~L~~L~Ls~N~l~~~--~p~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 422 (729)
.|..+..+++|++|++++|++.+. .|..+ ..+++|++|++++|.+++........+..+++|++|++++|++++..
T Consensus 165 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 244 (312)
T 1wwl_A 165 SCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAA 244 (312)
T ss_dssp CTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSC
T ss_pred hHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCccc
Confidence 778888889999999999987754 23344 77888899999988887432211122245678888999999988766
Q ss_pred C-cccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCcc
Q 046589 423 P-KEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLSR 492 (729)
Q Consensus 423 p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~ 492 (729)
| ..+..+++|++|++++|+++ .+|..+. ++|+.|+|++|++++. |. +..+++|++|++++|++++
T Consensus 245 ~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 245 GAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred chhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 4 45667888999999999888 7777766 7888999999998865 55 8888888888888888875
No 64
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.93 E-value=1e-28 Score=283.64 Aligned_cols=402 Identities=14% Similarity=0.100 Sum_probs=276.3
Q ss_pred hcCCcEEEEcCCCCC---cCcCCccCC------------CCCCCcEEECCCCCCCCCCcccccC-CC-CCCEEeccCCc-
Q 046589 103 LLLRVVYQVLRTQSL---KGPVSPLLF------------DLSKLRVLNLSQNLLFGQPSPQVSN-LK-RLKMLSLGENQ- 164 (729)
Q Consensus 103 ~~~~~~~l~l~~~~l---~~~~~~~l~------------~L~~L~~L~Ls~N~l~~~~~~~~~~-l~-~L~~L~Ls~N~- 164 (729)
...+++.++++++.. .+.+|..++ .+++|++|+|++|.+++..+..+.. ++ +|++|+|++|.
T Consensus 71 ~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~ 150 (592)
T 3ogk_B 71 RFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSG 150 (592)
T ss_dssp HCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEE
T ss_pred hCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCC
Confidence 456688999977532 133443333 6899999999999887765556655 33 59999999987
Q ss_pred Ccc-cCCccccCCCCCcEEEeeccCCCcc----CCccccCCCCCcEEEccCCCCCC----CCccccCCCCCCCeeeccCC
Q 046589 165 LSG-SLPSQLGVLTWLETLSLCSNSFTGE----MPSELGDMKQLKSLDFSGNGFNG----TVPIRLGELTRLQDLDLSDN 235 (729)
Q Consensus 165 l~~-~~p~~l~~L~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~L~~N 235 (729)
++. .++..+..+++|++|+|++|.+++. ++..+..+++|++|++++|.+++ .++..+.++++|++|++++|
T Consensus 151 ~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~ 230 (592)
T 3ogk_B 151 FTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDF 230 (592)
T ss_dssp EEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSC
T ss_pred cCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCc
Confidence 221 1233345789999999999998755 33455678999999999999973 34445678899999999999
Q ss_pred cCCCCCChhhhccCCCCCEEEccccccc---ccCCccccCCCcCCeeccccccccccccccccCCCCcccccccceeEEE
Q 046589 236 LLSGSLTVSLFTNLQSLSYLDVSNNLLS---GNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTF 312 (729)
Q Consensus 236 ~l~~~~~~~~~~~l~~L~~L~Ls~N~l~---~~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l 312 (729)
.+.+ ++ ..+..+++|++|+++..... ...+..+..+++|+.+.++.+.
T Consensus 231 ~~~~-l~-~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~--------------------------- 281 (592)
T 3ogk_B 231 EILE-LV-GFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG--------------------------- 281 (592)
T ss_dssp BGGG-GH-HHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC---------------------------
T ss_pred cHHH-HH-HHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccc---------------------------
Confidence 9874 55 67899999999999864322 2233445555556555443321
Q ss_pred EccCCCCCCCcchhcCCCCCCCEEEccCCcceecCC-CCCcCCCCCcEEEecCCCCCC-CCcccccCCCCCcEEEcCC--
Q 046589 313 SAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIP-LEVGNCSMLKYIRLSNNKLSG-SIPRELNDSESLVEINLDG-- 388 (729)
Q Consensus 313 ~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~-- 388 (729)
.+.+|..+..+++|++|++++|.+.+... ..+..+++|++|+++ +.+.. .++.....+++|++|++++
T Consensus 282 -------~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~ 353 (592)
T 3ogk_B 282 -------PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGA 353 (592)
T ss_dssp -------TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCC
T ss_pred -------hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCc
Confidence 12455566667788888888888654322 235677888888888 44332 3333445678889999883
Q ss_pred ---------CCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCC-CCCCCEEEcc----CCccccc-----cCcC
Q 046589 389 ---------NMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGN-LRSIQILKLN----SNFFNGS-----IPMR 449 (729)
Q Consensus 389 ---------N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~-l~~L~~L~L~----~N~l~~~-----~p~~ 449 (729)
|.+++..... ....+++|++|+++.|++++..+..+.. +++|+.|+++ .|.+++. ++..
T Consensus 354 ~~~~~~~~~~~~~~~~~~~--l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~ 431 (592)
T 3ogk_B 354 DEQGMEDEEGLVSQRGLIA--LAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSL 431 (592)
T ss_dssp CSSTTSSTTCCCCHHHHHH--HHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHH
T ss_pred cccccccccCccCHHHHHH--HHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHH
Confidence 4544221111 1234678889999888888776666655 8899999996 6777753 3333
Q ss_pred ccCCCCCCEEEcccc--cCCccCchhhhc-CCCCCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecCCCcC
Q 046589 450 LGDSTSLNILELGNN--NLNGSIPEKIAD-LAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNML 526 (729)
Q Consensus 450 ~~~l~~L~~L~Ls~N--~l~~~~p~~l~~-l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l 526 (729)
+..+++|+.|++++| .+++..+..+.. +++|+.|++++|.+++...... +..+++|+.|++++|.+
T Consensus 432 ~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~-----------~~~~~~L~~L~l~~n~l 500 (592)
T 3ogk_B 432 LIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEF-----------SRGCPNLQKLEMRGCCF 500 (592)
T ss_dssp HHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHH-----------HTCCTTCCEEEEESCCC
T ss_pred HHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHH-----------HhcCcccCeeeccCCCC
Confidence 566889999999854 477666666654 7889999999999875322111 12567899999999987
Q ss_pred cccCCchhhccccccccccccccccccCCceeeccCCcceee
Q 046589 527 SGPIPKELGSCVVVLTGYIPRSLGHLSCSVKLNLSGNKLSVL 568 (729)
Q Consensus 527 ~g~~p~~~~~~~~ll~g~ip~~~~~l~~L~~L~Ls~N~l~~~ 568 (729)
++. .++..+..+++|++|+|++|+++..
T Consensus 501 ~~~--------------~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 501 SER--------------AIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp BHH--------------HHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred cHH--------------HHHHHHHhcCccCeeECcCCcCCHH
Confidence 642 1233344678899999999998764
No 65
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.93 E-value=6.8e-26 Score=235.16 Aligned_cols=209 Identities=22% Similarity=0.224 Sum_probs=182.5
Q ss_pred cCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCc-CcccCCccccCCCCCcEE
Q 046589 104 LLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQ-LSGSLPSQLGVLTWLETL 182 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~L~~L~~L 182 (729)
..+++.+++++|.+++..+..+..+++|++|++++|.+++..+..|..+++|++|+|++|. ++...|..+..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 4578999999999998777789999999999999999999989999999999999999997 887678999999999999
Q ss_pred EeeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccc
Q 046589 183 SLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLL 262 (729)
Q Consensus 183 ~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l 262 (729)
++++|++++..|..|.++++|++|++++|.+++..+..++.+++|++|++++|.++ .++...|..+++|++|++++|.+
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l 189 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQNRV 189 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccc-ccCHHHhcCccccCEEECCCCcc
Confidence 99999999888999999999999999999999777778999999999999999998 56667789999999999999999
Q ss_pred cccCCccccCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCc
Q 046589 263 SGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQ 342 (729)
Q Consensus 263 ~~~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 342 (729)
++..|..+..+++|+.++++.|.+++ ..+..+..+++|+.|++++|.
T Consensus 190 ~~~~~~~~~~l~~L~~L~l~~n~l~~---------------------------------~~~~~~~~l~~L~~L~l~~N~ 236 (285)
T 1ozn_A 190 AHVHPHAFRDLGRLMTLYLFANNLSA---------------------------------LPTEALAPLRALQYLRLNDNP 236 (285)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSC---------------------------------CCHHHHTTCTTCCEEECCSSC
T ss_pred cccCHhHccCcccccEeeCCCCcCCc---------------------------------CCHHHcccCcccCEEeccCCC
Confidence 98888888888888887777766653 233445666777777777777
Q ss_pred ceec
Q 046589 343 FIGR 346 (729)
Q Consensus 343 l~~~ 346 (729)
+...
T Consensus 237 ~~c~ 240 (285)
T 1ozn_A 237 WVCD 240 (285)
T ss_dssp EECS
T ss_pred ccCC
Confidence 7643
No 66
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.93 E-value=1.9e-27 Score=250.18 Aligned_cols=59 Identities=27% Similarity=0.372 Sum_probs=33.6
Q ss_pred CCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCc
Q 046589 405 LSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNG 468 (729)
Q Consensus 405 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 468 (729)
+++|++|+|++|+++ .+|..+. ++|++|++++|++++. |. +..+++|++|+|++|++++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 445555556555555 4444444 5566666666666543 44 5566666666666666653
No 67
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=2.7e-27 Score=249.64 Aligned_cols=263 Identities=24% Similarity=0.287 Sum_probs=180.0
Q ss_pred CCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccC
Q 046589 155 LKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSD 234 (729)
Q Consensus 155 L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 234 (729)
++.++++.+.+....+..+..+++|++|+|++|++++..|..|.++++|++|+|++|.+++..| +..+++|++|++++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 5556666666654444445556667777777777766655666777777777777776664333 66666666666666
Q ss_pred CcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEc
Q 046589 235 NLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSA 314 (729)
Q Consensus 235 N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l 314 (729)
|.+++ ++ ..++|++|++++|.+++..+.
T Consensus 90 n~l~~-l~-----~~~~L~~L~l~~n~l~~~~~~---------------------------------------------- 117 (317)
T 3o53_A 90 NYVQE-LL-----VGPSIETLHAANNNISRVSCS---------------------------------------------- 117 (317)
T ss_dssp SEEEE-EE-----ECTTCCEEECCSSCCSEEEEC----------------------------------------------
T ss_pred Ccccc-cc-----CCCCcCEEECCCCccCCcCcc----------------------------------------------
Confidence 65542 11 224555555555544421111
Q ss_pred cCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCccccc-CCCCCcEEEcCCCCCCC
Q 046589 315 GMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELN-DSESLVEINLDGNMLSG 393 (729)
Q Consensus 315 ~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~ 393 (729)
.+++|+.|++++|++.+..+..+..+++|++|++++|++++..+..+. .+++|++|++++|.+++
T Consensus 118 --------------~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 183 (317)
T 3o53_A 118 --------------RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (317)
T ss_dssp --------------CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred --------------ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc
Confidence 124566677777777766666777778888888888888776666653 67888888888888775
Q ss_pred CccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCC-ccCch
Q 046589 394 TIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLN-GSIPE 472 (729)
Q Consensus 394 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~ 472 (729)
.... ..+++|++|+|++|++++ +|..+..+++|++|++++|+++ .+|..+..+++|+.|++++|.++ +.+|.
T Consensus 184 ~~~~-----~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~ 256 (317)
T 3o53_A 184 VKGQ-----VVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (317)
T ss_dssp EECC-----CCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHH
T ss_pred cccc-----cccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHH
Confidence 5222 236778889999998885 4555888889999999999888 57778888889999999999988 67788
Q ss_pred hhhcCCCCCEEeCCC-CcCcc
Q 046589 473 KIADLAQLQFLDLSY-NNLSR 492 (729)
Q Consensus 473 ~l~~l~~L~~LdLs~-N~l~~ 492 (729)
++..+++|+.+++++ +.+++
T Consensus 257 ~~~~~~~L~~l~l~~~~~l~~ 277 (317)
T 3o53_A 257 FFSKNQRVQTVAKQTVKKLTG 277 (317)
T ss_dssp HHHTCHHHHHHHHHHHHHHHS
T ss_pred HHhccccceEEECCCchhccC
Confidence 888888888888884 34444
No 68
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.93 E-value=1.1e-26 Score=242.13 Aligned_cols=105 Identities=22% Similarity=0.371 Sum_probs=87.8
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCC-cceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKS-HISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~-~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+|||+++++++||+|||+|+....... ...+...+|++|||||.+....++.++|||||||++|||+| |+.|+.
T Consensus 170 DLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~ 249 (308)
T 4gt4_A 170 DLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 249 (308)
T ss_dssp CCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred CccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999987653222 22335678899999999888899999999999999999999 888876
Q ss_pred CCc--------------------chH--HHHhhcccCCCCCCCCccccC
Q 046589 703 PKF--------------------EDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~~--------------------~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
..- .+. +++..||+.+|++||||+||+
T Consensus 250 ~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~ 298 (308)
T 4gt4_A 250 GYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIH 298 (308)
T ss_dssp TCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCHHHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 310 011 799999999999999999874
No 69
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.93 E-value=2.9e-26 Score=237.89 Aligned_cols=105 Identities=28% Similarity=0.470 Sum_probs=82.5
Q ss_pred cccccceEecCCccEEEeecCCccccCCCC-CcceecccccccccCccccC---CCCCCchhhHHHHHHHHHHHHhCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCK-SHISTDVASAISYVPPEYGR---ARKANERDNIYRFGVVLLELVIRKQP 700 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~-~~~~~~~~~~~~y~ape~~~---~~~~~~~~Dv~s~G~vl~el~tg~~p 700 (729)
|+||+|||+++++++||+|||+|+...... ........||+.|||||.+. ...|+.++|||||||++|||+||+.|
T Consensus 157 DlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~P 236 (307)
T 3omv_A 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236 (307)
T ss_dssp CCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred ccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCC
Confidence 999999999999999999999998765322 22234568999999999764 34689999999999999999999999
Q ss_pred CCC-C-c-----------------------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 701 TGP-K-F-----------------------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 701 ~~~-~-~-----------------------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|.. . . .+ .+++..||+.+|++||||+||+
T Consensus 237 f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~ 292 (307)
T 3omv_A 237 YSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQIL 292 (307)
T ss_dssp TTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHH
T ss_pred CCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence 862 0 0 00 1799999999999999999873
No 70
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.92 E-value=3.2e-26 Score=240.84 Aligned_cols=105 Identities=28% Similarity=0.452 Sum_probs=80.7
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCC-cceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKS-HISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~-~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+|||+++++++||+|||+|+....... ...+...+|+.|||||...+..++.++|||||||++|||+| |+.|+.
T Consensus 183 DLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~ 262 (329)
T 4aoj_A 183 DLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 262 (329)
T ss_dssp CCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred cccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCC
Confidence 9999999999999999999999997653322 22335678999999999989999999999999999999999 899976
Q ss_pred C-C-------------------cchH--HHHhhcccCCCCCCCCccccC
Q 046589 703 P-K-------------------FEDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~-~-------------------~~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. . +.++ +++.+||+.+|++||||+||+
T Consensus 263 ~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~ 311 (329)
T 4aoj_A 263 QLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVH 311 (329)
T ss_dssp SSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHH
T ss_pred CCCHHHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHH
Confidence 2 1 0011 899999999999999999874
No 71
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.92 E-value=2.9e-26 Score=237.77 Aligned_cols=104 Identities=25% Similarity=0.440 Sum_probs=87.0
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcc-eecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHI-STDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~-~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+|||++.++++||+|||+|+......... .....+|++|||||......++.++|||||||++|||+| |+.|+.
T Consensus 153 DlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~ 232 (299)
T 4asz_A 153 DLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWY 232 (299)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred ccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999999999998765322222 223568899999999988899999999999999999999 899976
Q ss_pred C-C-------------------cchH--HHHhhcccCCCCCCCCcccc
Q 046589 703 P-K-------------------FEDK--DIVVGCVSDNPIAKPGMLRV 728 (729)
Q Consensus 703 ~-~-------------------~~~~--~l~~~c~~~~p~~Rp~~~~v 728 (729)
. . +.++ +++..||+.+|++||||++|
T Consensus 233 ~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i 280 (299)
T 4asz_A 233 QLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGI 280 (299)
T ss_dssp TSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence 3 1 0011 89999999999999999986
No 72
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.92 E-value=1.3e-26 Score=244.42 Aligned_cols=268 Identities=21% Similarity=0.202 Sum_probs=160.0
Q ss_pred EEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeecc
Q 046589 108 VYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSN 187 (729)
Q Consensus 108 ~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N 187 (729)
...+++.+.+.......+..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..| +..+++|++|++++|
T Consensus 13 ~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 13 KIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred eEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 334455555443333344455677777777777777766677777777777777777765443 677777777777777
Q ss_pred CCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCC
Q 046589 188 SFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIP 267 (729)
Q Consensus 188 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 267 (729)
++++.. ..++|++|++++|.+++..+. .+++|++|++++|.++ .++...+..+++|++|++++|.+++..+
T Consensus 91 ~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (317)
T 3o53_A 91 YVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKIT-MLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (317)
T ss_dssp EEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCC-SGGGBCTGGGSSEEEEECTTSCCCEEEG
T ss_pred cccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCC-CccchhhhccCCCCEEECCCCCCCcccH
Confidence 766322 236677777777776643332 2455666666666665 3333445555666666666665554333
Q ss_pred ccccCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecC
Q 046589 268 PEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRI 347 (729)
Q Consensus 268 ~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 347 (729)
..+. ..+++|++|++++|.+.+..
T Consensus 162 ~~~~--------------------------------------------------------~~l~~L~~L~L~~N~l~~~~ 185 (317)
T 3o53_A 162 AELA--------------------------------------------------------ASSDTLEHLNLQYNFIYDVK 185 (317)
T ss_dssp GGGG--------------------------------------------------------GGTTTCCEEECTTSCCCEEE
T ss_pred HHHh--------------------------------------------------------hccCcCCEEECCCCcCcccc
Confidence 3221 12344555555555554432
Q ss_pred CCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCc-ccCCccc
Q 046589 348 PLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLT-GRIPKEI 426 (729)
Q Consensus 348 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~l 426 (729)
+ ...+++|++|+|++|++++ +|..+..+++|+.|++++|.++.. |..+ ..+++|+.|++++|.+. +.+|.++
T Consensus 186 ~--~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~l-~~~~---~~l~~L~~L~l~~N~~~~~~~~~~~ 258 (317)
T 3o53_A 186 G--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLI-EKAL---RFSQNLEHFDLRGNGFHCGTLRDFF 258 (317)
T ss_dssp C--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEE-CTTC---CCCTTCCEEECTTCCCBHHHHHHHH
T ss_pred c--ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccch-hhHh---hcCCCCCEEEccCCCccCcCHHHHH
Confidence 1 2235667777777777764 333466667777777777776643 3322 45567778888888877 5677777
Q ss_pred CCCCCCCEEEccC-CccccccCcC
Q 046589 427 GNLRSIQILKLNS-NFFNGSIPMR 449 (729)
Q Consensus 427 ~~l~~L~~L~L~~-N~l~~~~p~~ 449 (729)
..+++|+.|++++ +.+.+..|..
T Consensus 259 ~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 259 SKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp HTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred hccccceEEECCCchhccCCchhc
Confidence 7888888888874 3455544433
No 73
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.92 E-value=2.3e-25 Score=234.14 Aligned_cols=104 Identities=20% Similarity=0.309 Sum_probs=89.1
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+|||++.++++||+|||+|+...... ......+||++|||||.+....|+.++||||+||++|||+||+.||...
T Consensus 195 DlKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~ 273 (346)
T 4fih_A 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 273 (346)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCEECCSSS-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cCCHHHEEECCCCCEEEecCcCceecCCCC-CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 999999999999999999999998765422 2234568999999999988889999999999999999999999998631
Q ss_pred -------------------cc---h--HHHHhhcccCCCCCCCCccccC
Q 046589 705 -------------------FE---D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 705 -------------------~~---~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|. + .+++.+|+..||++|||++|++
T Consensus 274 ~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l 322 (346)
T 4fih_A 274 PPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 322 (346)
T ss_dssp CHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHT
T ss_pred CHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence 11 1 1799999999999999999874
No 74
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=1.5e-25 Score=250.05 Aligned_cols=149 Identities=23% Similarity=0.285 Sum_probs=112.1
Q ss_pred CCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCccccc-CCCCCcEEEcCCCCCCCCccccccccCCCCCCc
Q 046589 331 NQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELN-DSESLVEINLDGNMLSGTIEDVFGRCTNLSQLE 409 (729)
Q Consensus 331 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~ 409 (729)
++|+.|++++|.+.+..|..++.+++|++|+|++|.+++.+|..+. .+++|+.|+|++|.+++.++. ..+++|+
T Consensus 120 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~-----~~l~~L~ 194 (487)
T 3oja_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQ-----VVFAKLK 194 (487)
T ss_dssp SSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECC-----CCCTTCC
T ss_pred CCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccccccc-----ccCCCCC
Confidence 4566777777777777677777778888888888888877777765 677888888888887765322 2367788
Q ss_pred EEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCC-ccCchhhhcCCCCCEEeCC
Q 046589 410 KLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLN-GSIPEKIADLAQLQFLDLS 486 (729)
Q Consensus 410 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~LdLs 486 (729)
+|+|++|.+++. |..+..+++|+.|++++|.+++ +|..+..+++|+.|++++|.+. +.+|.++..++.|+.++++
T Consensus 195 ~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 195 TLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp EEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred EEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 888888888864 4457788888888888888884 6777888888888888888887 5677777777777777665
No 75
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.91 E-value=8.3e-26 Score=235.82 Aligned_cols=105 Identities=25% Similarity=0.389 Sum_probs=80.9
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc---ceecccccccccCccccCCC------CCCchhhHHHHHHHHHHHH
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH---ISTDVASAISYVPPEYGRAR------KANERDNIYRFGVVLLELV 695 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~---~~~~~~~~~~y~ape~~~~~------~~~~~~Dv~s~G~vl~el~ 695 (729)
|+||+|||+|.++++||+|||+|+........ ......||++|||||++.+. .++.++|||||||++|||+
T Consensus 133 DlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~ 212 (303)
T 3hmm_A 133 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212 (303)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHH
Confidence 99999999999999999999999876543222 12245789999999987543 4678999999999999999
Q ss_pred hCCCCCCC---------C---------------------------cch-------HHHHhhcccCCCCCCCCccccC
Q 046589 696 IRKQPTGP---------K---------------------------FED-------KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 696 tg~~p~~~---------~---------------------------~~~-------~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
||+.|+.. . +.. .+++.+||+.+|++||||+||+
T Consensus 213 tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~ 289 (303)
T 3hmm_A 213 RRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 289 (303)
T ss_dssp HTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHH
T ss_pred HCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHH
Confidence 99765420 0 000 0689999999999999999874
No 76
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.91 E-value=1.2e-25 Score=236.63 Aligned_cols=136 Identities=26% Similarity=0.464 Sum_probs=109.9
Q ss_pred cccccccCCCCCCcceEEEeec-CCCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTM-PDGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~-~~~~~~avk~----------------------------------------------- 624 (729)
++|...+.||+|+||+||+|+. .+|+.||||.
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 4677778899999999999987 4899999996
Q ss_pred ----------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcce
Q 046589 625 ----------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHIS 658 (729)
Q Consensus 625 ----------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~ 658 (729)
||||+|||++.++.+||+|||+|+..... ....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~~~~ 182 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-VELA 182 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-HHHH
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCC-cccc
Confidence 99999999999999999999999876421 1122
Q ss_pred ecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc--------------------ch--HHHHhhccc
Q 046589 659 TDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPKF--------------------ED--KDIVVGCVS 716 (729)
Q Consensus 659 ~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~--------------------~~--~~l~~~c~~ 716 (729)
....||+.|||||.+.+..|+.++||||+||++|||+||+.||...- .+ .+++.+|++
T Consensus 183 ~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~~~L~ 262 (350)
T 4b9d_A 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFK 262 (350)
T ss_dssp HHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTC
T ss_pred cccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcc
Confidence 34679999999999988899999999999999999999999987311 11 179999999
Q ss_pred CCCCCCCCccccC
Q 046589 717 DNPIAKPGMLRVQ 729 (729)
Q Consensus 717 ~~p~~Rp~~~~v~ 729 (729)
.+|++|||++|++
T Consensus 263 ~dP~~R~s~~e~l 275 (350)
T 4b9d_A 263 RNPRDRPSVNSIL 275 (350)
T ss_dssp SSGGGSCCHHHHH
T ss_pred CChhHCcCHHHHh
Confidence 9999999999863
No 77
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.91 E-value=6e-25 Score=227.45 Aligned_cols=136 Identities=26% Similarity=0.424 Sum_probs=117.0
Q ss_pred cccccccCCCCCCcceEEEeec-CCCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTM-PDGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~-~~~~~~avk~----------------------------------------------- 624 (729)
++|.....||+|+||+||+|+. .+|+.||||.
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4677778899999999999987 4889999995
Q ss_pred ---------------------------------------------cccccceEecCCccEEEeecCCccccCCCCC-cce
Q 046589 625 ---------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKS-HIS 658 (729)
Q Consensus 625 ---------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~-~~~ 658 (729)
|+||+|||++.++.+||+|||+|+....... ...
T Consensus 112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~ 191 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191 (311)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCB
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccc
Confidence 9999999999999999999999998754322 223
Q ss_pred ecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---------------cc----h--HHHHhhcccC
Q 046589 659 TDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK---------------FE----D--KDIVVGCVSD 717 (729)
Q Consensus 659 ~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~---------------~~----~--~~l~~~c~~~ 717 (729)
.+.+||+.|||||...+..|+.++||||+||++|||+||+.||... +. + .+++.+|+..
T Consensus 192 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~lL~~ 271 (311)
T 4aw0_A 192 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVL 271 (311)
T ss_dssp CCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHSCS
T ss_pred cCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccCHHHHHHHHHHccC
Confidence 4568999999999988888999999999999999999999998731 11 1 1799999999
Q ss_pred CCCCCCCcccc
Q 046589 718 NPIAKPGMLRV 728 (729)
Q Consensus 718 ~p~~Rp~~~~v 728 (729)
+|++|||++|+
T Consensus 272 dp~~R~t~~e~ 282 (311)
T 4aw0_A 272 DATKRLGCEEM 282 (311)
T ss_dssp SGGGSTTSGGG
T ss_pred CHhHCcChHHH
Confidence 99999999885
No 78
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.91 E-value=2.7e-25 Score=235.64 Aligned_cols=105 Identities=28% Similarity=0.456 Sum_probs=88.8
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcc-eecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHI-STDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~-~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+|||+++++++||+|||+|+......... .....+|+.|||||.+.+..++.++|||||||++|||+| |+.|+.
T Consensus 210 DLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~ 289 (353)
T 4ase_A 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 289 (353)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred ccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCC
Confidence 999999999999999999999999875443332 235678899999999888899999999999999999998 899986
Q ss_pred C-Ccch--------------------H--HHHhhcccCCCCCCCCccccC
Q 046589 703 P-KFED--------------------K--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~-~~~~--------------------~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. ...+ + +++..||+.+|++||||+||+
T Consensus 290 ~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil 339 (353)
T 4ase_A 290 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 339 (353)
T ss_dssp TCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHH
Confidence 3 1110 0 799999999999999999874
No 79
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.91 E-value=2.2e-24 Score=240.70 Aligned_cols=168 Identities=22% Similarity=0.181 Sum_probs=82.2
Q ss_pred EEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCC
Q 046589 310 FTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGN 389 (729)
Q Consensus 310 ~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 389 (729)
..++++.|.+.+..|..+..+++|++|+|++|.+.+..| +..+++|++|+|++|.+++..+ .++|+.|++++|
T Consensus 37 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~~N 109 (487)
T 3oja_A 37 KELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAANN 109 (487)
T ss_dssp CEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECCSS
T ss_pred cEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECcCC
Confidence 445555555555444555555555555555555554443 4455555555555555543211 245555555555
Q ss_pred CCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCcc-CCCCCCEEEcccccCCc
Q 046589 390 MLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLG-DSTSLNILELGNNNLNG 468 (729)
Q Consensus 390 ~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~ 468 (729)
.+++.++. .+++|+.|+|++|.+++..|..++.+++|++|+|++|.+++..|..+. .+++|+.|+|++|.+++
T Consensus 110 ~l~~~~~~------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 110 NISRVSCS------RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp CCCCEEEC------CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred cCCCCCcc------ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 55443332 123455555555555554444555555555555555555544444443 44555555555555543
Q ss_pred cCchhhhcCCCCCEEeCCCCcCcc
Q 046589 469 SIPEKIADLAQLQFLDLSYNNLSR 492 (729)
Q Consensus 469 ~~p~~l~~l~~L~~LdLs~N~l~~ 492 (729)
..+ ...+++|+.|+|++|.+++
T Consensus 184 ~~~--~~~l~~L~~L~Ls~N~l~~ 205 (487)
T 3oja_A 184 VKG--QVVFAKLKTLDLSSNKLAF 205 (487)
T ss_dssp EEC--CCCCTTCCEEECCSSCCCE
T ss_pred ccc--cccCCCCCEEECCCCCCCC
Confidence 321 2234455555555555543
No 80
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.91 E-value=1.2e-24 Score=224.06 Aligned_cols=101 Identities=26% Similarity=0.461 Sum_probs=84.4
Q ss_pred cccccceEecC-CccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNE-DFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~-~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+|||++. ++.+||+|||+|+.... ....+..||++|||||... ..|+.++|||||||++|||+||+.||..
T Consensus 156 DlKp~NILl~~~~g~vKl~DFGla~~~~~---~~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~ 231 (290)
T 3fpq_A 156 DLKCDNIFITGPTGSVKIGDLGLATLKRA---SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp CCCGGGEEESSTTSCEEECCTTGGGGCCT---TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccChhheeEECCCCCEEEEeCcCCEeCCC---CccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 99999999984 78999999999986432 2234568999999999875 4699999999999999999999999862
Q ss_pred -Ccc---------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 704 -KFE---------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 -~~~---------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... + .+++.+||+.+|++|||++|++
T Consensus 232 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l 281 (290)
T 3fpq_A 232 CQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281 (290)
T ss_dssp CSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred CCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence 100 0 1799999999999999999863
No 81
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.91 E-value=6.1e-25 Score=230.18 Aligned_cols=136 Identities=21% Similarity=0.328 Sum_probs=111.0
Q ss_pred cccccccCCCCCCcceEEEeec-CCCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTM-PDGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~-~~~~~~avk~----------------------------------------------- 624 (729)
+.+.....||+|+||+||+|+. .+|+.||||.
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 3455556799999999999997 4799999996
Q ss_pred -------------------------------------cccccceEecCCc-cEEEeecCCccccCCCCCc----ceeccc
Q 046589 625 -------------------------------------DIKASNILLNEDF-DAKVLDFGLARLISDCKSH----ISTDVA 662 (729)
Q Consensus 625 -------------------------------------dlk~~nill~~~~-~~kl~dfgl~~~~~~~~~~----~~~~~~ 662 (729)
|+||+|||++.++ ++||+|||+|+........ ......
T Consensus 138 ~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~ 217 (336)
T 4g3f_A 138 GQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 217 (336)
T ss_dssp HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCC
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccc
Confidence 9999999999887 6999999999986532211 112357
Q ss_pred ccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc----------------------ch--HHHHhhcccCC
Q 046589 663 SAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPKF----------------------ED--KDIVVGCVSDN 718 (729)
Q Consensus 663 ~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~----------------------~~--~~l~~~c~~~~ 718 (729)
||+.|||||.+.+..|+.++||||+||++|||+||+.||.... .+ .+++.+|++.+
T Consensus 218 GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~d 297 (336)
T 4g3f_A 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKE 297 (336)
T ss_dssp CCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSS
T ss_pred cCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCC
Confidence 9999999999988899999999999999999999999986310 00 17999999999
Q ss_pred CCCCCCcccc
Q 046589 719 PIAKPGMLRV 728 (729)
Q Consensus 719 p~~Rp~~~~v 728 (729)
|++|||++|+
T Consensus 298 P~~R~sa~el 307 (336)
T 4g3f_A 298 PVHRASAMEL 307 (336)
T ss_dssp GGGSCCHHHH
T ss_pred HhHCcCHHHH
Confidence 9999999886
No 82
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=3.2e-23 Score=213.89 Aligned_cols=162 Identities=21% Similarity=0.254 Sum_probs=128.4
Q ss_pred cCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCc
Q 046589 112 LRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTG 191 (729)
Q Consensus 112 l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~ 191 (729)
..+.++. .+|..+. ++|++|++++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++
T Consensus 14 c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 90 (276)
T 2z62_A 14 CMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 90 (276)
T ss_dssp CTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred ecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCc
Confidence 3334443 3454333 479999999999998888888899999999999999987777788999999999999999988
Q ss_pred cCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCC-CChhhhccCCCCCEEEcccccccccCCccc
Q 046589 192 EMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGS-LTVSLFTNLQSLSYLDVSNNLLSGNIPPEI 270 (729)
Q Consensus 192 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l 270 (729)
..+..|.++++|++|++++|.+.+..+..++.+++|++|++++|.+++. ++ ..|..+++|++|++++|++++..+..+
T Consensus 91 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 169 (276)
T 2z62_A 91 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLP-EYFSNLTNLEHLDLSSNKIQSIYCTDL 169 (276)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCC-GGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred cChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCc-hhhccCCCCCEEECCCCCCCcCCHHHh
Confidence 8888899999999999999999877776788889999999999988742 34 667888888888888888876555555
Q ss_pred cCCCcCC
Q 046589 271 SHLKKLS 277 (729)
Q Consensus 271 ~~l~~L~ 277 (729)
..+.+|+
T Consensus 170 ~~l~~L~ 176 (276)
T 2z62_A 170 RVLHQMP 176 (276)
T ss_dssp HHHHTCT
T ss_pred hhhhhcc
Confidence 5444443
No 83
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.91 E-value=8.8e-25 Score=223.07 Aligned_cols=103 Identities=21% Similarity=0.432 Sum_probs=78.0
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKA-NERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~-~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+|+..... ....+..||+.|||||...+..+ +.++||||+||++|||+||+.||..
T Consensus 137 DiKP~NILl~~~~~vkl~DFGla~~~~~~--~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~ 214 (275)
T 3hyh_A 137 DLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214 (275)
T ss_dssp CCCTTTEEECTTCCEEECCSSCC-----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCChHHeEECCCCCEEEeecCCCeecCCC--CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999999876532 22345689999999998877665 6899999999999999999999873
Q ss_pred Ccc-------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 704 KFE-------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~~~-------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.-. + .+++.+|++.+|++|||++|++
T Consensus 215 ~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil 261 (275)
T 3hyh_A 215 ESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 261 (275)
T ss_dssp SSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHH
Confidence 111 1 1799999999999999999863
No 84
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.90 E-value=1.5e-24 Score=233.55 Aligned_cols=136 Identities=25% Similarity=0.336 Sum_probs=116.1
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
..|.....||+|+||+||+|+.. +|+.||||.
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 34566667999999999999974 899999996
Q ss_pred -----------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceecccc
Q 046589 625 -----------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS 663 (729)
Q Consensus 625 -----------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~ 663 (729)
||||+|||++.++.+||+|||+|+...... ......+|
T Consensus 231 ~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~~~~~G 309 (423)
T 4fie_A 231 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKSLVG 309 (423)
T ss_dssp TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-CCBCCCEE
T ss_pred CCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC-cccccccc
Confidence 999999999999999999999998765422 22345689
Q ss_pred cccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-------------------c---ch--HHHHhhcccCCC
Q 046589 664 AISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK-------------------F---ED--KDIVVGCVSDNP 719 (729)
Q Consensus 664 ~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~-------------------~---~~--~~l~~~c~~~~p 719 (729)
|++|||||.+....|+.++||||+||++|||++|+.||... | .+ .+++.+|+..||
T Consensus 310 Tp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP 389 (423)
T 4fie_A 310 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 389 (423)
T ss_dssp CTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSST
T ss_pred CcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCCh
Confidence 99999999998889999999999999999999999998631 0 01 179999999999
Q ss_pred CCCCCccccC
Q 046589 720 IAKPGMLRVQ 729 (729)
Q Consensus 720 ~~Rp~~~~v~ 729 (729)
++|||++|++
T Consensus 390 ~~R~ta~ell 399 (423)
T 4fie_A 390 AQRATAAELL 399 (423)
T ss_dssp TTSCCHHHHT
T ss_pred hHCcCHHHHh
Confidence 9999999874
No 85
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.90 E-value=4.1e-23 Score=213.04 Aligned_cols=208 Identities=22% Similarity=0.197 Sum_probs=126.3
Q ss_pred CCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEE
Q 046589 356 MLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQIL 435 (729)
Q Consensus 356 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 435 (729)
+|++|++++|++++..+..+..+++|++|++++|.+++..+..| ..+++|++|++++|.+++..+..+.++++|++|
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~---~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAY---QSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 105 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTT---TTCTTCCEEECTTCCCCEECTTTTTTCTTCCEE
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHc---cCCcCCCEEECCCCccCccChhhhcCCccccEE
Confidence 45555555555554444455555555555555555554444333 344556666666666666556666666777777
Q ss_pred EccCCccccccCcCccCCCCCCEEEcccccCCcc-CchhhhcCCCCCEEeCCCCcCcccccccccccccccCCCCcccCC
Q 046589 436 KLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGS-IPEKIADLAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSH 514 (729)
Q Consensus 436 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~ 514 (729)
++++|.+.+..+..++.+++|++|++++|++++. +|..+..+++|++|++++|++++..+..+. .+..+.
T Consensus 106 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---------~l~~L~ 176 (276)
T 2z62_A 106 VAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR---------VLHQMP 176 (276)
T ss_dssp ECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGH---------HHHTCT
T ss_pred ECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhh---------hhhhcc
Confidence 7777766655555666667777777777776653 466677777777777777776643222221 011222
Q ss_pred CCC-eEecCCCcCcccCCchhhccccccccccccccccccCCceeeccCCcceeecccccccccccccccCCcccccC
Q 046589 515 NYR-KFDLSYNMLSGPIPKELGSCVVVLTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTNLDLSYNEFDG 591 (729)
Q Consensus 515 ~l~-~ldls~N~l~g~~p~~~~~~~~ll~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 591 (729)
.+. .+++++|.+++.. .......+|+.|++++|++++..+..|..+++|+.|++++|++++
T Consensus 177 ~l~l~L~ls~n~l~~~~----------------~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 177 LLNLSLDLSLNPMNFIQ----------------PGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp TCCEEEECCSSCCCEEC----------------TTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred ccceeeecCCCcccccC----------------ccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 222 5777777765322 122223367788888888887777777888888888888888776
No 86
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.90 E-value=5.4e-27 Score=269.41 Aligned_cols=158 Identities=17% Similarity=0.209 Sum_probs=112.6
Q ss_pred cCCCCCCCcEEECCCCCCCC---CCcc------------cccCCCCCCEEeccCCcCcccCCcccc-CCCCCcEEEeecc
Q 046589 124 LLFDLSKLRVLNLSQNLLFG---QPSP------------QVSNLKRLKMLSLGENQLSGSLPSQLG-VLTWLETLSLCSN 187 (729)
Q Consensus 124 ~l~~L~~L~~L~Ls~N~l~~---~~~~------------~~~~l~~L~~L~Ls~N~l~~~~p~~l~-~L~~L~~L~Ls~N 187 (729)
.+..+++|++|++++|.... ..|. ....+++|++|+|++|.+++..+..+. .+++|++|+|++|
T Consensus 61 ~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~ 140 (594)
T 2p1m_B 61 VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSC 140 (594)
T ss_dssp HHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCc
Confidence 35567889999998875321 1111 124578999999999998877777775 6889999999998
Q ss_pred -CCCcc-CCccccCCCCCcEEEccCCCCCCCCccccC----CCCCCCeeeccCCcCCCCCChhh----hccCCCCCEEEc
Q 046589 188 -SFTGE-MPSELGDMKQLKSLDFSGNGFNGTVPIRLG----ELTRLQDLDLSDNLLSGSLTVSL----FTNLQSLSYLDV 257 (729)
Q Consensus 188 -~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~----~l~~L~~L~L~~N~l~~~~~~~~----~~~l~~L~~L~L 257 (729)
.++.. ++..+.++++|++|+|++|.+++..+..+. .+++|++|++++|. +.+.... +..+++|++|++
T Consensus 141 ~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L 218 (594)
T 2p1m_B 141 EGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKL 218 (594)
T ss_dssp EEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEEC
T ss_pred CCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEec
Confidence 45422 444555789999999999987765554443 66799999999886 2333333 345699999999
Q ss_pred ccc-cccccCCccccCCCcCCeeccccc
Q 046589 258 SNN-LLSGNIPPEISHLKKLSDHYLGIN 284 (729)
Q Consensus 258 s~N-~l~~~~p~~l~~l~~L~~l~l~~n 284 (729)
++| .+. .+|..+..+++|+.+.++.+
T Consensus 219 ~~~~~~~-~l~~~~~~~~~L~~L~l~~~ 245 (594)
T 2p1m_B 219 NRAVPLE-KLATLLQRAPQLEELGTGGY 245 (594)
T ss_dssp CTTSCHH-HHHHHHHHCTTCSEEECSBC
T ss_pred CCCCcHH-HHHHHHhcCCcceEcccccc
Confidence 988 444 36777778888888875543
No 87
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.90 E-value=2.5e-24 Score=222.77 Aligned_cols=100 Identities=26% Similarity=0.441 Sum_probs=83.3
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+|||++.++++||+|||+|+...... ....+..||+.|||||......++.++||||+||++|||+||+.||...
T Consensus 151 DlKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~ 229 (304)
T 3ubd_A 151 DLKPENILLDEEGHIKLTDFGLSKESIDHE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229 (304)
T ss_dssp SCCGGGEEECTTSCEEEESSEEEEC------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCHHHeEEcCCCCEEecccccceeccCCC-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc
Confidence 999999999999999999999998754322 2233568999999999988889999999999999999999999998731
Q ss_pred cc-------------------h--HHHHhhcccCCCCCCCCc
Q 046589 705 FE-------------------D--KDIVVGCVSDNPIAKPGM 725 (729)
Q Consensus 705 ~~-------------------~--~~l~~~c~~~~p~~Rp~~ 725 (729)
-. + .+++.+|++.+|++|||+
T Consensus 230 ~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 230 DRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp SHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred CHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 11 1 189999999999999995
No 88
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.89 E-value=1e-21 Score=201.89 Aligned_cols=174 Identities=25% Similarity=0.270 Sum_probs=120.7
Q ss_pred cEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeec
Q 046589 107 VVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCS 186 (729)
Q Consensus 107 ~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~ 186 (729)
.+.++++++.++ .+|..+. +++++|+|++|.+++.++..|.++++|++|+|++|+++...+..|..+++|++|+|++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 456777777777 3555443 5678888888888777777777888888888888888755555567778888888888
Q ss_pred cCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccC
Q 046589 187 NSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNI 266 (729)
Q Consensus 187 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 266 (729)
|++++..+..|.++++|++|++++|.+++..+..|..+++|++|++++|.++ .++...|..+++|++|++++|.+++..
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC-ccCHhHccCCcccceeEecCCcCcEeC
Confidence 8877666666777778888888888777666666777777777777777776 455456677777777777777666444
Q ss_pred CccccCCCcCCeeccccc
Q 046589 267 PPEISHLKKLSDHYLGIN 284 (729)
Q Consensus 267 p~~l~~l~~L~~l~l~~n 284 (729)
+..+..+++|+.++++.|
T Consensus 174 ~~~~~~l~~L~~L~L~~N 191 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNN 191 (270)
T ss_dssp TTTTTTCTTCCEEECCSS
T ss_pred hhHhccCCCcCEEECCCC
Confidence 444444444444444333
No 89
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.88 E-value=8.7e-24 Score=219.50 Aligned_cols=102 Identities=26% Similarity=0.440 Sum_probs=77.0
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc-----------ceecccccccccCccccCCCCCCchhhHHHHHHHHHH
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH-----------ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLE 693 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~-----------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~e 693 (729)
|+||+|||++.++++||+|||+|+........ ..++.+||+.|||||...+..|+.++||||+||++||
T Consensus 143 DlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilye 222 (299)
T 4g31_A 143 DLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222 (299)
T ss_dssp CCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred cCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999876532211 1123579999999999888899999999999999999
Q ss_pred HHhCCCCCCCCcc--------------h---------HHHHhhcccCCCCCCCCccccC
Q 046589 694 LVIRKQPTGPKFE--------------D---------KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 694 l~tg~~p~~~~~~--------------~---------~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|++ |+..... + .+++.+|++.+|++|||++|++
T Consensus 223 ll~---Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil 278 (299)
T 4g31_A 223 LLY---PFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINII 278 (299)
T ss_dssp HHS---CCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred Hcc---CCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence 996 6552111 0 1689999999999999999863
No 90
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.88 E-value=2.1e-21 Score=199.58 Aligned_cols=131 Identities=27% Similarity=0.309 Sum_probs=85.6
Q ss_pred CCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEcc
Q 046589 130 KLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFS 209 (729)
Q Consensus 130 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 209 (729)
..+.++++++.++.++. .+. ++|++|+|++|++++..+..|..+++|++|+|++|+++...+..|.++++|++|+++
T Consensus 17 ~~~~l~~~~~~l~~ip~-~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIPS-NIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCSSCCS-CCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCCccCC-CCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 46677777777776432 222 467777777777775555667777777777777777775555556677777777777
Q ss_pred CCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccc
Q 046589 210 GNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSG 264 (729)
Q Consensus 210 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 264 (729)
+|.++...+..+..+++|++|++++|.++ .++...|..+++|++|++++|.+++
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~ 147 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQS 147 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccC-eeCHHHhCcCcCCCEEECCCCcCCc
Confidence 77776555555666666777777666665 3444555666666666666665553
No 91
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.88 E-value=4.6e-22 Score=204.73 Aligned_cols=211 Identities=24% Similarity=0.310 Sum_probs=148.1
Q ss_pred CCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCc
Q 046589 125 LFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLK 204 (729)
Q Consensus 125 l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 204 (729)
...+++|+.|++++|.++.. +.+..+++|++|+|++|.+++ + +.++.+++|++|+|++|.+++..+..|.++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 44567777777777777653 246677777777777777764 2 3677777777777777777766666677777777
Q ss_pred EEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeeccccc
Q 046589 205 SLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGIN 284 (729)
Q Consensus 205 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n 284 (729)
+|++++|++++..+..++.+++|++|++++|.++ .++...|..+++|++|++++|++++..+..+..+++|+.++++.|
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccC-ccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 7777777777666666777777777777777776 455466677777777777777777666666677777777776666
Q ss_pred cccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecC
Q 046589 285 QFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSN 364 (729)
Q Consensus 285 ~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~ 364 (729)
.+++ ..|..+..+++|+.|++++|.+.+. +++|++|+++.
T Consensus 192 ~l~~---------------------------------~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~ 231 (272)
T 3rfs_A 192 QLKS---------------------------------VPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWI 231 (272)
T ss_dssp CCSC---------------------------------CCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHH
T ss_pred cCCc---------------------------------cCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHH
Confidence 5543 2233455667777888888776543 45677788888
Q ss_pred CCCCCCCcccccCCCC
Q 046589 365 NKLSGSIPRELNDSES 380 (729)
Q Consensus 365 N~l~~~~p~~~~~l~~ 380 (729)
|+++|.+|.+++.+..
T Consensus 232 n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 232 NKHSGVVRNSAGSVAP 247 (272)
T ss_dssp HHTGGGBBCTTSCBCG
T ss_pred HhCCCcccCcccccCC
Confidence 8888888877765543
No 92
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.87 E-value=1.1e-21 Score=201.80 Aligned_cols=209 Identities=23% Similarity=0.207 Sum_probs=151.0
Q ss_pred CCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCC
Q 046589 329 KWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQL 408 (729)
Q Consensus 329 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L 408 (729)
.+++|+.|++++|.+.. + ..+..+++|++|++++|++++. ..+..+++|++|++++|.+++.++..+ ..+++|
T Consensus 39 ~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~---~~l~~L 111 (272)
T 3rfs_A 39 ELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVF---DKLTNL 111 (272)
T ss_dssp HHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTT---TTCTTC
T ss_pred cccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHh---cCCcCC
Confidence 45677888888887653 2 3467778888888888888752 367778888888888888877666554 445677
Q ss_pred cEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCC
Q 046589 409 EKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYN 488 (729)
Q Consensus 409 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N 488 (729)
++|++++|++++..+..+..+++|++|++++|.+++..+..+..+++|+.|++++|++++..+..+..+++|++|++++|
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 88888888888766777788888888888888887666666777888888888888888777777778888888888888
Q ss_pred cCcccccccccccccccCCCCcccCCCCCeEecCCCcCcccCCchhhccccccccccccccccccCCceeeccCCcceee
Q 046589 489 NLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVVLTGYIPRSLGHLSCSVKLNLSGNKLSVL 568 (729)
Q Consensus 489 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~ll~g~ip~~~~~l~~L~~L~Ls~N~l~~~ 568 (729)
++++..+..+ ..+++|+.+++++|.+.+. ++.++.|+++.|+++|.
T Consensus 192 ~l~~~~~~~~------------~~l~~L~~L~l~~N~~~~~----------------------~~~l~~l~~~~n~~~g~ 237 (272)
T 3rfs_A 192 QLKSVPDGVF------------DRLTSLQYIWLHDNPWDCT----------------------CPGIRYLSEWINKHSGV 237 (272)
T ss_dssp CCSCCCTTTT------------TTCTTCCEEECCSSCBCCC----------------------TTTTHHHHHHHHHTGGG
T ss_pred cCCccCHHHH------------hCCcCCCEEEccCCCcccc----------------------CcHHHHHHHHHHhCCCc
Confidence 8775333222 2566777788888877542 33456677777777777
Q ss_pred cccccccccc
Q 046589 569 VPTSFGNLNG 578 (729)
Q Consensus 569 ~p~~~~~l~~ 578 (729)
+|..++.+..
T Consensus 238 ip~~~~~~~~ 247 (272)
T 3rfs_A 238 VRNSAGSVAP 247 (272)
T ss_dssp BBCTTSCBCG
T ss_pred ccCcccccCC
Confidence 7776665443
No 93
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.87 E-value=3.4e-25 Score=254.38 Aligned_cols=411 Identities=15% Similarity=0.123 Sum_probs=234.2
Q ss_pred cCCcEEEEcCCCCCcCc---CCc------------cCCCCCCCcEEECCCCCCCCCCccccc-CCCCCCEEeccCC-cCc
Q 046589 104 LLRVVYQVLRTQSLKGP---VSP------------LLFDLSKLRVLNLSQNLLFGQPSPQVS-NLKRLKMLSLGEN-QLS 166 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~---~~~------------~l~~L~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N-~l~ 166 (729)
..+++.++++++..... .|. ....+++|++|+|++|.+++..+..+. .+++|++|+|++| .++
T Consensus 65 ~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~ 144 (594)
T 2p1m_B 65 FPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFS 144 (594)
T ss_dssp CTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEE
T ss_pred CCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCC
Confidence 45678888887642211 111 123578999999999998876666664 6899999999999 555
Q ss_pred cc-CCccccCCCCCcEEEeeccCCCccCCccc----cCCCCCcEEEccCCC--CCC-CCccccCCCCCCCeeeccCC-cC
Q 046589 167 GS-LPSQLGVLTWLETLSLCSNSFTGEMPSEL----GDMKQLKSLDFSGNG--FNG-TVPIRLGELTRLQDLDLSDN-LL 237 (729)
Q Consensus 167 ~~-~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l----~~l~~L~~L~Ls~N~--l~~-~~p~~l~~l~~L~~L~L~~N-~l 237 (729)
.. ++..+..+++|++|+|++|.+++..+..+ ..+++|++|++++|. +.. .++..+..+++|++|++++| .+
T Consensus 145 ~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~ 224 (594)
T 2p1m_B 145 TDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPL 224 (594)
T ss_dssp HHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCH
T ss_pred HHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcH
Confidence 33 44445589999999999999876554444 367799999999997 221 11222345699999999988 33
Q ss_pred CCCCChhhhccCCCCCEEEcccc-------cccccCCccccCCCcCCee-ccccccccccccccccCCCCccccccccee
Q 046589 238 SGSLTVSLFTNLQSLSYLDVSNN-------LLSGNIPPEISHLKKLSDH-YLGINQFTGSIQSELGNCKNFKSVLAELQI 309 (729)
Q Consensus 238 ~~~~~~~~~~~l~~L~~L~Ls~N-------~l~~~~p~~l~~l~~L~~l-~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l 309 (729)
. .++ ..+..+++|++|+++.+ .+.+ ++..+..+++|+.+ .+....
T Consensus 225 ~-~l~-~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~------------------------ 277 (594)
T 2p1m_B 225 E-KLA-TLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAV------------------------ 277 (594)
T ss_dssp H-HHH-HHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCC------------------------
T ss_pred H-HHH-HHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccc------------------------
Confidence 3 233 56788999999996544 3332 23345556666554 111110
Q ss_pred EEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecC-CCCCcCCCCCcEEEecCCCCCCC-CcccccCCCCCcEEEcC
Q 046589 310 FTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRI-PLEVGNCSMLKYIRLSNNKLSGS-IPRELNDSESLVEINLD 387 (729)
Q Consensus 310 ~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~ 387 (729)
.+.++..+..+++|++|++++|.+.+.. +..+..+++|++|++++| +... ++.....+++|+.|++.
T Consensus 278 ----------~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~ 346 (594)
T 2p1m_B 278 ----------PAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVF 346 (594)
T ss_dssp ----------GGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEE
T ss_pred ----------hhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEe
Confidence 0112333334456666666666644321 111335566666666666 3211 11122235666666663
Q ss_pred C---------CCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccC-CCCCCCEEEcc--C----Cccccc-----c
Q 046589 388 G---------NMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIG-NLRSIQILKLN--S----NFFNGS-----I 446 (729)
Q Consensus 388 ~---------N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~L~--~----N~l~~~-----~ 446 (729)
+ +.+++.....+ ...+++|++|+++.|.+++..+..+. .+++|+.|+++ + |.+++. +
T Consensus 347 ~~~~~g~~~~~~l~~~~l~~l--~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~ 424 (594)
T 2p1m_B 347 PSEPFVMEPNVALTEQGLVSV--SMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGF 424 (594)
T ss_dssp CSCTTCSSCSSCCCHHHHHHH--HHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHH
T ss_pred cCcccccccCCCCCHHHHHHH--HHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHH
Confidence 2 22221111111 12245666676666666654444443 46677777776 3 344311 1
Q ss_pred CcCccCCCCCCEEEcccccCCccCchhhhc-CCCCCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecCCCc
Q 046589 447 PMRLGDSTSLNILELGNNNLNGSIPEKIAD-LAQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNM 525 (729)
Q Consensus 447 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~-l~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~ 525 (729)
+..+..+++|+.|+|++ .+++..+..+.. +++|+.|++++|.+++..+.... ..+++|+.|++++|.
T Consensus 425 ~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~-----------~~~~~L~~L~L~~n~ 492 (594)
T 2p1m_B 425 GAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVL-----------SGCDSLRKLEIRDCP 492 (594)
T ss_dssp HHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHH-----------HHCTTCCEEEEESCS
T ss_pred HHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHH-----------hcCCCcCEEECcCCC
Confidence 11244556777777765 555555555544 66777777777776543222211 135567777777777
Q ss_pred CcccCCchhhccccccccccccccccccCCceeeccCCcceeeccccc-ccccccc
Q 046589 526 LSGPIPKELGSCVVVLTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSF-GNLNGLT 580 (729)
Q Consensus 526 l~g~~p~~~~~~~~ll~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~ 580 (729)
+++..+..+.. .+++|+.|++++|+++......+ ..++.|+
T Consensus 493 ~~~~~~~~~~~--------------~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~ 534 (594)
T 2p1m_B 493 FGDKALLANAS--------------KLETMRSLWMSSCSVSFGACKLLGQKMPKLN 534 (594)
T ss_dssp CCHHHHHHTGG--------------GGGGSSEEEEESSCCBHHHHHHHHHHCTTEE
T ss_pred CcHHHHHHHHH--------------hCCCCCEEeeeCCCCCHHHHHHHHHhCCCCE
Confidence 65433332221 13456777777777765433333 2344443
No 94
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.87 E-value=2.5e-21 Score=201.01 Aligned_cols=202 Identities=25% Similarity=0.242 Sum_probs=97.4
Q ss_pred CCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcE
Q 046589 126 FDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKS 205 (729)
Q Consensus 126 ~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 205 (729)
.++++++++++++|.++.+++.. .+++++|+|++|.+++..|..|..+++|++|+|++|.+++..+. ..+++|++
T Consensus 7 ~~l~~l~~l~~~~~~l~~ip~~~---~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~ 81 (290)
T 1p9a_G 7 SKVASHLEVNCDKRNLTALPPDL---PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGT 81 (290)
T ss_dssp ECSTTCCEEECTTSCCSSCCSCC---CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCE
T ss_pred cccCCccEEECCCCCCCcCCCCC---CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCE
Confidence 34444555555555444433211 13444555555555444444455555555555555554432221 44445555
Q ss_pred EEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeecccccc
Q 046589 206 LDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQ 285 (729)
Q Consensus 206 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~ 285 (729)
|++++|+++ .+|..+..+++|++|++++|+++ .++...|..+++|++|++++|++++..+..+..+++|+.++++.|+
T Consensus 82 L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 82 LDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EECCSSCCS-SCCCCTTTCTTCCEEECCSSCCC-CCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EECCCCcCC-cCchhhccCCCCCEEECCCCcCc-ccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 555555554 34444445555555555555554 3333444455555555555555554444444445555544444444
Q ss_pred ccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCC
Q 046589 286 FTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNN 365 (729)
Q Consensus 286 l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N 365 (729)
+++ ..+..+..+++|+.|++++|++. .+|..+..+++|++|+|++|
T Consensus 160 l~~---------------------------------l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~N 205 (290)
T 1p9a_G 160 LTE---------------------------------LPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205 (290)
T ss_dssp CSC---------------------------------CCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSC
T ss_pred CCc---------------------------------cCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCC
Confidence 331 11122334455566666666655 44555555566677777776
Q ss_pred CCC
Q 046589 366 KLS 368 (729)
Q Consensus 366 ~l~ 368 (729)
.+.
T Consensus 206 p~~ 208 (290)
T 1p9a_G 206 PWL 208 (290)
T ss_dssp CBC
T ss_pred Ccc
Confidence 664
No 95
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=9.9e-24 Score=226.65 Aligned_cols=130 Identities=23% Similarity=0.176 Sum_probs=75.7
Q ss_pred EEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCC----ccccCCC-CCcEEEeeccCCCccCCccccCC-----CC
Q 046589 133 VLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLP----SQLGVLT-WLETLSLCSNSFTGEMPSELGDM-----KQ 202 (729)
Q Consensus 133 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p----~~l~~L~-~L~~L~Ls~N~l~~~~p~~l~~l-----~~ 202 (729)
.++++.|.+++.+|..+...++|++|||++|.+++..+ +.+..++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35667777776666555555567777777777765554 5556666 67777777777765555555543 66
Q ss_pred CcEEEccCCCCCCCCccccCC----C-CCCCeeeccCCcCCCCCChhhh----cc-CCCCCEEEccccccc
Q 046589 203 LKSLDFSGNGFNGTVPIRLGE----L-TRLQDLDLSDNLLSGSLTVSLF----TN-LQSLSYLDVSNNLLS 263 (729)
Q Consensus 203 L~~L~Ls~N~l~~~~p~~l~~----l-~~L~~L~L~~N~l~~~~~~~~~----~~-l~~L~~L~Ls~N~l~ 263 (729)
|++|+|++|.+++..+..++. + ++|++|++++|.+++ .+...+ .. .++|++|+|++|.++
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~-~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 151 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSS-KSSSEFKQAFSNLPASITSLNLRGNDLG 151 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGG-SCHHHHHHHHTTSCTTCCEEECTTSCGG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCc-HHHHHHHHHHHhCCCceeEEEccCCcCC
Confidence 666666666666554443322 2 566666666666542 222222 22 235555555555554
No 96
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.87 E-value=3.7e-21 Score=199.69 Aligned_cols=156 Identities=25% Similarity=0.238 Sum_probs=106.0
Q ss_pred cCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCC
Q 046589 327 LGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLS 406 (729)
Q Consensus 327 l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~ 406 (729)
+.++++++.+++++|.+. .+|..+. +++++|+|++|++++..+..+..+++|+.|++++|.+++..+. ..++
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~l~ 77 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-----GTLP 77 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-----SCCT
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-----CCCC
Confidence 445667777777777776 3444333 5777888888887776667777777777777777777654332 3466
Q ss_pred CCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCC
Q 046589 407 QLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLS 486 (729)
Q Consensus 407 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs 486 (729)
+|++|++++|+++ .+|..+..+++|++|++++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+++
T Consensus 78 ~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 156 (290)
T 1p9a_G 78 VLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLA 156 (290)
T ss_dssp TCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred cCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECC
Confidence 6777777777776 456666777777777777777775555666677777777777777766555566666667777766
Q ss_pred CCcCc
Q 046589 487 YNNLS 491 (729)
Q Consensus 487 ~N~l~ 491 (729)
+|+++
T Consensus 157 ~N~l~ 161 (290)
T 1p9a_G 157 NNNLT 161 (290)
T ss_dssp TSCCS
T ss_pred CCcCC
Confidence 66665
No 97
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.86 E-value=2.3e-23 Score=223.79 Aligned_cols=263 Identities=22% Similarity=0.233 Sum_probs=200.9
Q ss_pred EEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCC----CCCcCCC-CCcEEEecCCCCCCCCcccccCC-----CCC
Q 046589 312 FSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIP----LEVGNCS-MLKYIRLSNNKLSGSIPRELNDS-----ESL 381 (729)
Q Consensus 312 l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p----~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L 381 (729)
+.++.|.+++.+|..+...++|++|++++|.+.+..+ ..+..++ +|++|+|++|++++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4567788888888888888889999999999987665 5677788 89999999999998878777765 899
Q ss_pred cEEEcCCCCCCCCccccccc-cCCC-CCCcEEEcCCCcCcccCCcc----cCC-CCCCCEEEccCCcccccc----CcCc
Q 046589 382 VEINLDGNMLSGTIEDVFGR-CTNL-SQLEKLDLSSNMLTGRIPKE----IGN-LRSIQILKLNSNFFNGSI----PMRL 450 (729)
Q Consensus 382 ~~L~L~~N~l~~~~~~~~~~-~~~l-~~L~~L~Ls~N~l~~~~p~~----l~~-l~~L~~L~L~~N~l~~~~----p~~~ 450 (729)
++|+|++|.+++..+..+.. +..+ ++|++|+|++|.+++..+.. +.. .++|++|++++|.+++.. +..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 99999999998776665443 3444 78999999999998766554 344 369999999999998533 3444
Q ss_pred cCCC-CCCEEEcccccCCccCchhhhc----C-CCCCEEeCCCCcCcccccccccccccccCCCCcccCCCCCeEecCCC
Q 046589 451 GDST-SLNILELGNNNLNGSIPEKIAD----L-AQLQFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYN 524 (729)
Q Consensus 451 ~~l~-~L~~L~Ls~N~l~~~~p~~l~~----l-~~L~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N 524 (729)
...+ +|+.|+|++|++++..+..+.. . ++|+.|||++|.+++.....+...+. ...++|+.||+++|
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~-------~~~~~L~~L~Ls~N 235 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFS-------SIPNHVVSLNLCLN 235 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHH-------HSCTTCCEEECCSS
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHh-------cCCCCceEEECcCC
Confidence 5555 9999999999998877765544 4 69999999999998632222221110 12358999999999
Q ss_pred cCcccCCchhhccccccccccccccccccCCceeeccCCcceeec-------ccccccccccccccCCcccccCC
Q 046589 525 MLSGPIPKELGSCVVVLTGYIPRSLGHLSCSVKLNLSGNKLSVLV-------PTSFGNLNGLTNLDLSYNEFDGN 592 (729)
Q Consensus 525 ~l~g~~p~~~~~~~~ll~g~ip~~~~~l~~L~~L~Ls~N~l~~~~-------p~~~~~l~~L~~L~Ls~N~l~g~ 592 (729)
.+++..+..+ ...+..+++|++|+|++|.+.... +..+..++.|+.||+++|++.+.
T Consensus 236 ~l~~~~~~~l-----------~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 236 CLHGPSLENL-----------KLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp CCCCCCHHHH-----------HHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred CCCcHHHHHH-----------HHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 9986544322 234566788999999999955443 34677889999999999998763
No 98
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.86 E-value=2.7e-22 Score=216.40 Aligned_cols=105 Identities=23% Similarity=0.343 Sum_probs=85.0
Q ss_pred cccccceEecCCccEEEeecCCccccCCCC---CcceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCK---SHISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQP 700 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~---~~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p 700 (729)
|+||+|||++.++.+|++|||+|+...... .....+..||++|+|||...+ ..++.++||||+||++|||+||+.|
T Consensus 183 DlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~p 262 (398)
T 4b99_A 183 DLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 262 (398)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCS
T ss_pred CcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCC
Confidence 999999999999999999999998764321 122345689999999998665 4579999999999999999999999
Q ss_pred CCCC-------------------------------------------c-------ch--HHHHhhcccCCCCCCCCcccc
Q 046589 701 TGPK-------------------------------------------F-------ED--KDIVVGCVSDNPIAKPGMLRV 728 (729)
Q Consensus 701 ~~~~-------------------------------------------~-------~~--~~l~~~c~~~~p~~Rp~~~~v 728 (729)
|... | .+ .+++.+|+..||++|||++|+
T Consensus 263 F~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~ 342 (398)
T 4b99_A 263 FPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAA 342 (398)
T ss_dssp SCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred CCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHH
Confidence 8521 0 00 168999999999999999987
Q ss_pred C
Q 046589 729 Q 729 (729)
Q Consensus 729 ~ 729 (729)
+
T Consensus 343 L 343 (398)
T 4b99_A 343 L 343 (398)
T ss_dssp T
T ss_pred h
Confidence 4
No 99
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.86 E-value=1.4e-21 Score=205.06 Aligned_cols=144 Identities=22% Similarity=0.187 Sum_probs=85.9
Q ss_pred CCCCcEEECCCCCCCCCCcccc--cCCCCCCEEeccCCcCcccCC----ccccCCCCCcEEEeeccCCCccCCccccCCC
Q 046589 128 LSKLRVLNLSQNLLFGQPSPQV--SNLKRLKMLSLGENQLSGSLP----SQLGVLTWLETLSLCSNSFTGEMPSELGDMK 201 (729)
Q Consensus 128 L~~L~~L~Ls~N~l~~~~~~~~--~~l~~L~~L~Ls~N~l~~~~p----~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~ 201 (729)
+++|++|++++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..|.+++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 3456666666666666666655 666666666666666665444 2334566666777777766666666666666
Q ss_pred CCcEEEccCCCCCCC--C--ccccCCCCCCCeeeccCCcCCCCCChh---hhccCCCCCEEEcccccccccCCccccC
Q 046589 202 QLKSLDFSGNGFNGT--V--PIRLGELTRLQDLDLSDNLLSGSLTVS---LFTNLQSLSYLDVSNNLLSGNIPPEISH 272 (729)
Q Consensus 202 ~L~~L~Ls~N~l~~~--~--p~~l~~l~~L~~L~L~~N~l~~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 272 (729)
+|++|+|++|++.+. + +..++.+++|++|++++|+++ .++.. .+..+++|++|||++|.+++..|..+..
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 246 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPR 246 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSS
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHh
Confidence 777777777665431 1 222356666666777666665 23211 2455666666666666666554544433
No 100
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=7.8e-21 Score=193.03 Aligned_cols=179 Identities=27% Similarity=0.255 Sum_probs=159.0
Q ss_pred cEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeec
Q 046589 107 VVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCS 186 (729)
Q Consensus 107 ~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~ 186 (729)
...++++++.++ .+|..+. +++++|+|++|.+++..+..|.++++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 346788888887 4666554 6899999999999999888999999999999999999988888899999999999999
Q ss_pred cCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccC
Q 046589 187 NSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNI 266 (729)
Q Consensus 187 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 266 (729)
|++++..+..|..+++|++|+|++|.+++..+..+..+++|++|+|++|.++ .++...|..+++|++|+|++|++++..
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCC-ccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 9999888888999999999999999999777777899999999999999998 566577899999999999999999877
Q ss_pred CccccCCCcCCeecccccccccc
Q 046589 267 PPEISHLKKLSDHYLGINQFTGS 289 (729)
Q Consensus 267 p~~l~~l~~L~~l~l~~n~l~~~ 289 (729)
+..+..+++|+.+++++|.+.+.
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHHHhCCCCCCEEEeeCCceeCC
Confidence 78899999999999999998754
No 101
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.86 E-value=1.7e-21 Score=204.49 Aligned_cols=207 Identities=21% Similarity=0.204 Sum_probs=153.6
Q ss_pred CCCcEEEecCCCCCCCCcccc--cCCCCCcEEEcCCCCCCCCccccc-cccCCCCCCcEEEcCCCcCcccCCcccCCCCC
Q 046589 355 SMLKYIRLSNNKLSGSIPREL--NDSESLVEINLDGNMLSGTIEDVF-GRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRS 431 (729)
Q Consensus 355 ~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 431 (729)
++|++|++++|++++..|..+ ..+++|++|++++|.+++..+... ..+..+++|++|+|++|++++..+..+..+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 456677777777666666665 666677777777777665433211 11235778889999999998888888999999
Q ss_pred CCEEEccCCccccc--c--CcCccCCCCCCEEEcccccCCccCch----hhhcCCCCCEEeCCCCcCccccccccccccc
Q 046589 432 IQILKLNSNFFNGS--I--PMRLGDSTSLNILELGNNNLNGSIPE----KIADLAQLQFLDLSYNNLSRPILSKHSSYFH 503 (729)
Q Consensus 432 L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p~----~l~~l~~L~~LdLs~N~l~~~~~~~~~~~~~ 503 (729)
|++|++++|++.+. + +..++.+++|++|+|++|+++ .++. .+..+++|++|||++|++++..|....
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~---- 245 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAP---- 245 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCS----
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHH----
Confidence 99999999987652 2 334578889999999999997 3333 357889999999999999876665543
Q ss_pred ccCCCCcccCCCCCeEecCCCcCcccCCchhhccccccccccccccccccCCceeeccCCcceeeccccccccccccccc
Q 046589 504 EVNIPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVVLTGYIPRSLGHLSCSVKLNLSGNKLSVLVPTSFGNLNGLTNLD 583 (729)
Q Consensus 504 ~~~~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~ll~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 583 (729)
.+.++++|+.|++++|+++ .+| ..+. ++|++|||++|++++. |. +..+++|+.|+
T Consensus 246 -----~~~~~~~L~~L~Ls~N~l~-~lp---------------~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~ 300 (310)
T 4glp_A 246 -----RCMWSSALNSLNLSFAGLE-QVP---------------KGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLT 300 (310)
T ss_dssp -----SCCCCTTCCCEECCSSCCC-SCC---------------SCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEE
T ss_pred -----hccCcCcCCEEECCCCCCC-chh---------------hhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEE
Confidence 2224478999999999997 333 3332 6889999999999986 33 67889999999
Q ss_pred CCcccccC
Q 046589 584 LSYNEFDG 591 (729)
Q Consensus 584 Ls~N~l~g 591 (729)
+++|+|+.
T Consensus 301 L~~N~l~~ 308 (310)
T 4glp_A 301 LDGNPFLV 308 (310)
T ss_dssp CSSTTTSC
T ss_pred CcCCCCCC
Confidence 99999864
No 102
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.85 E-value=9.3e-23 Score=216.64 Aligned_cols=204 Identities=14% Similarity=0.140 Sum_probs=94.8
Q ss_pred CCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCcc-CCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeee
Q 046589 153 KRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGE-MPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLD 231 (729)
Q Consensus 153 ~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 231 (729)
++++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|++++|.+++..+..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4455555555555433332 33445555555555554433 444455555555555555555444444555555555555
Q ss_pred ccCC-cCCCCCChhhhccCCCCCEEEcccc-ccccc-CCccccCCC-cCCeecccccc--ccccccccccCCCCcccccc
Q 046589 232 LSDN-LLSGSLTVSLFTNLQSLSYLDVSNN-LLSGN-IPPEISHLK-KLSDHYLGINQ--FTGSIQSELGNCKNFKSVLA 305 (729)
Q Consensus 232 L~~N-~l~~~~~~~~~~~l~~L~~L~Ls~N-~l~~~-~p~~l~~l~-~L~~l~l~~n~--l~~~~~~~l~~l~~l~~~l~ 305 (729)
+++| .+++......+..+++|++|++++| .+++. ++..+..++ +|+.++++.|. ++.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~----------------- 211 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQK----------------- 211 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCH-----------------
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCH-----------------
Confidence 5555 3332111133445555555555555 44432 233334444 44444444432 110
Q ss_pred cceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCc-ceecCCCCCcCCCCCcEEEecCCC-CCCCCcccccCCCCCcE
Q 046589 306 ELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQ-FIGRIPLEVGNCSMLKYIRLSNNK-LSGSIPRELNDSESLVE 383 (729)
Q Consensus 306 ~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~ 383 (729)
+.+|..+..+++|+.|++++|. +++..+..+..+++|++|++++|. +.......+..+++|+.
T Consensus 212 ---------------~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~ 276 (336)
T 2ast_B 212 ---------------SDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKT 276 (336)
T ss_dssp ---------------HHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred ---------------HHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCE
Confidence 0122233334555566666655 444444455555666666666663 21111113445555555
Q ss_pred EEcCCC
Q 046589 384 INLDGN 389 (729)
Q Consensus 384 L~L~~N 389 (729)
|++++|
T Consensus 277 L~l~~~ 282 (336)
T 2ast_B 277 LQVFGI 282 (336)
T ss_dssp EECTTS
T ss_pred EeccCc
Confidence 555555
No 103
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.85 E-value=6.6e-21 Score=192.08 Aligned_cols=130 Identities=22% Similarity=0.268 Sum_probs=72.4
Q ss_pred CCcEEECCCCCCCCCCcccccCCCCCCEEeccCCc-CcccCCccccCCCCCcEEEeec-cCCCccCCccccCCCCCcEEE
Q 046589 130 KLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQ-LSGSLPSQLGVLTWLETLSLCS-NSFTGEMPSELGDMKQLKSLD 207 (729)
Q Consensus 130 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~L~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~ 207 (729)
+|++|++++|+++++++..|.++++|++|++++|+ ++...+..|..+++|++|++++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 56666666666666655566666666666666664 5544444566666666666665 666655555566666666666
Q ss_pred ccCCCCCCCCccccCCCCCCC---eeeccCC-cCCCCCChhhhccCCCCC-EEEcccccc
Q 046589 208 FSGNGFNGTVPIRLGELTRLQ---DLDLSDN-LLSGSLTVSLFTNLQSLS-YLDVSNNLL 262 (729)
Q Consensus 208 Ls~N~l~~~~p~~l~~l~~L~---~L~L~~N-~l~~~~~~~~~~~l~~L~-~L~Ls~N~l 262 (729)
+++|.+++ +|. +..+++|+ +|++++| .++ .++...|..+++|+ +|++++|.+
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~-~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMT-SIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCC-EECTTTTTTTBSSEEEEECCSCCC
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchh-hcCcccccchhcceeEEEcCCCCC
Confidence 66666553 443 45555554 5555555 443 33333344444444 444444443
No 104
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=6.5e-23 Score=222.36 Aligned_cols=193 Identities=19% Similarity=0.212 Sum_probs=124.0
Q ss_pred cCCCCCCCEEEccCCccee----cCCCCCcCCCCCcEEEecCCCCCCCCcccccC----C---------CCCcEEEcCCC
Q 046589 327 LGKWNQMESVWLNNNQFIG----RIPLEVGNCSMLKYIRLSNNKLSGSIPRELND----S---------ESLVEINLDGN 389 (729)
Q Consensus 327 l~~l~~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~----l---------~~L~~L~L~~N 389 (729)
+..+++|++|+|++|.+.+ .+|..+..+++|++|+|++|.++...+..+.. + ++|++|++++|
T Consensus 90 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n 169 (386)
T 2ca6_A 90 LLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRN 169 (386)
T ss_dssp HTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSS
T ss_pred HhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCC
Confidence 4556677777777777765 34555666777777777777775433333332 2 67777777777
Q ss_pred CCC-CCccccccccCCCCCCcEEEcCCCcCcc-----cCCcccCCCCCCCEEEccCCccc----cccCcCccCCCCCCEE
Q 046589 390 MLS-GTIEDVFGRCTNLSQLEKLDLSSNMLTG-----RIPKEIGNLRSIQILKLNSNFFN----GSIPMRLGDSTSLNIL 459 (729)
Q Consensus 390 ~l~-~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-----~~p~~l~~l~~L~~L~L~~N~l~----~~~p~~~~~l~~L~~L 459 (729)
.++ ..++.....+..+++|++|+|++|.++. ..|..+..+++|++|+|++|.++ +.+|..+..+++|+.|
T Consensus 170 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L 249 (386)
T 2ca6_A 170 RLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL 249 (386)
T ss_dssp CCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEE
T ss_pred CCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEE
Confidence 776 2333222233445677778888777762 23446777777888888888775 4566677777778888
Q ss_pred EcccccCCcc----Cchhhhc--CCCCCEEeCCCCcCcc----cccccccccccccCCCCcccCCCCCeEecCCCcCccc
Q 046589 460 ELGNNNLNGS----IPEKIAD--LAQLQFLDLSYNNLSR----PILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGP 529 (729)
Q Consensus 460 ~Ls~N~l~~~----~p~~l~~--l~~L~~LdLs~N~l~~----~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~ 529 (729)
+|++|.+++. +|..+.. +++|+.|+|++|.+++ .+|.... ..+++|+.|++++|.+++.
T Consensus 250 ~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~-----------~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 250 GLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVID-----------EKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp ECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHH-----------HHCTTCCEEECTTSBSCTT
T ss_pred ECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHH-----------hcCCCceEEEccCCcCCcc
Confidence 8888877755 4555533 7778888888887765 2333321 1346677777777777654
Q ss_pred C
Q 046589 530 I 530 (729)
Q Consensus 530 ~ 530 (729)
.
T Consensus 319 ~ 319 (386)
T 2ca6_A 319 D 319 (386)
T ss_dssp S
T ss_pred h
Confidence 3
No 105
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.85 E-value=8.5e-22 Score=221.75 Aligned_cols=130 Identities=27% Similarity=0.427 Sum_probs=111.5
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
++|.....||+|+||+||+|+.. +|+.||||.
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 57788889999999999999974 889999995
Q ss_pred ------------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCc
Q 046589 625 ------------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSH 656 (729)
Q Consensus 625 ------------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~ 656 (729)
||||+|||++.++++||+|||+|+......
T Consensus 269 lVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~-- 346 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 346 (689)
T ss_dssp EEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCC--
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCC--
Confidence 999999999999999999999998865432
Q ss_pred ceecccccccccCccccC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCC-c---------------------ch--HHHH
Q 046589 657 ISTDVASAISYVPPEYGR-ARKANERDNIYRFGVVLLELVIRKQPTGPK-F---------------------ED--KDIV 711 (729)
Q Consensus 657 ~~~~~~~~~~y~ape~~~-~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~-~---------------------~~--~~l~ 711 (729)
..+.+||+.|||||.+. +..|+.++||||+||++|||+||+.||... . .+ .+++
T Consensus 347 -~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~a~dLI 425 (689)
T 3v5w_A 347 -PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLL 425 (689)
T ss_dssp -CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred -CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccCCHHHHHHH
Confidence 23468999999999875 457899999999999999999999999631 0 00 1899
Q ss_pred hhcccCCCCCCCCc
Q 046589 712 VGCVSDNPIAKPGM 725 (729)
Q Consensus 712 ~~c~~~~p~~Rp~~ 725 (729)
..|+..+|.+|++.
T Consensus 426 ~~lL~~dP~~Rl~~ 439 (689)
T 3v5w_A 426 EGLLQRDVNRRLGC 439 (689)
T ss_dssp HHHTCSCGGGCTTC
T ss_pred HHHccCCHhHCCCC
Confidence 99999999999983
No 106
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.84 E-value=1e-21 Score=209.57 Aligned_cols=78 Identities=27% Similarity=0.353 Sum_probs=62.6
Q ss_pred cccccceEecCC-ccEEEeecCCccccCCCCC---------------------------cceecccccccccCccccCCC
Q 046589 625 DIKASNILLNED-FDAKVLDFGLARLISDCKS---------------------------HISTDVASAISYVPPEYGRAR 676 (729)
Q Consensus 625 dlk~~nill~~~-~~~kl~dfgl~~~~~~~~~---------------------------~~~~~~~~~~~y~ape~~~~~ 676 (729)
|+||+|||++.+ +.+|++|||+|+....... ...+..+||++|+|||...+.
T Consensus 142 DiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 221 (361)
T 4f9c_A 142 DVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKC 221 (361)
T ss_dssp CCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTC
T ss_pred cCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCC
Confidence 999999999876 7999999999986542211 112235799999999987654
Q ss_pred -CCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 677 -KANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 677 -~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
.++.++||||+||++|||+||+.||.
T Consensus 222 ~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 222 PNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 58999999999999999999999984
No 107
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.84 E-value=5.3e-23 Score=223.04 Aligned_cols=115 Identities=17% Similarity=0.261 Sum_probs=65.8
Q ss_pred CCCCcEEEecCCCCCC-----CCcccccCCCCCcEEEcCCCCCC----CCccccccccCCCCCCcEEEcCCCcCccc---
Q 046589 354 CSMLKYIRLSNNKLSG-----SIPRELNDSESLVEINLDGNMLS----GTIEDVFGRCTNLSQLEKLDLSSNMLTGR--- 421 (729)
Q Consensus 354 l~~L~~L~Ls~N~l~~-----~~p~~~~~l~~L~~L~L~~N~l~----~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~--- 421 (729)
+++|++|++++|+++. ..|..+..+++|+.|+|++|.++ ..++..+ ..+++|++|+|++|.+++.
T Consensus 186 ~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l---~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 186 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIAL---KSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp CTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHG---GGCTTCCEEECTTCCCCHHHHH
T ss_pred CCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHH---ccCCCcCEEECCCCCCchhhHH
Confidence 3444444444444431 12224444455555555555543 1222222 3445566677777766654
Q ss_pred -CCccc--CCCCCCCEEEccCCcccc----ccCcCc-cCCCCCCEEEcccccCCccCc
Q 046589 422 -IPKEI--GNLRSIQILKLNSNFFNG----SIPMRL-GDSTSLNILELGNNNLNGSIP 471 (729)
Q Consensus 422 -~p~~l--~~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~p 471 (729)
++..+ +.+++|++|+|++|.+++ .+|..+ ..+++|+.|+|++|++++..+
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 44555 337778888888888776 366666 557888888888888876664
No 108
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.84 E-value=1.4e-22 Score=215.19 Aligned_cols=125 Identities=18% Similarity=0.174 Sum_probs=89.1
Q ss_pred CCEEeccCCcCcccCCccccCC--CCCcEEEeeccCCCccCCccccCCCCCcEEEccCCCCCCC-CccccCCCCCCCeee
Q 046589 155 LKMLSLGENQLSGSLPSQLGVL--TWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGT-VPIRLGELTRLQDLD 231 (729)
Q Consensus 155 L~~L~Ls~N~l~~~~p~~l~~L--~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~ 231 (729)
++.+++++|.+. |..+..+ .+++.|++++|.+.+..+. +..+++|++|++++|.+++. +|..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 566677766654 4455666 7899999999998866555 56788999999999888755 777788888888888
Q ss_pred ccCCcCCCCCChhhhccCCCCCEEEcccc-ccccc-CCccccCCCcCCeeccccc
Q 046589 232 LSDNLLSGSLTVSLFTNLQSLSYLDVSNN-LLSGN-IPPEISHLKKLSDHYLGIN 284 (729)
Q Consensus 232 L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N-~l~~~-~p~~l~~l~~L~~l~l~~n 284 (729)
+++|.+++..+ ..+..+++|++|++++| .+++. ++..+..+++|+.++++.|
T Consensus 125 L~~~~l~~~~~-~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 178 (336)
T 2ast_B 125 LEGLRLSDPIV-NTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWC 178 (336)
T ss_dssp CTTCBCCHHHH-HHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCC
T ss_pred CcCcccCHHHH-HHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCC
Confidence 88888764333 56677888888888887 45542 3444555555555555555
No 109
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.84 E-value=1.3e-20 Score=189.97 Aligned_cols=180 Identities=17% Similarity=0.128 Sum_probs=160.5
Q ss_pred cCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCC-CCCCCcccccCCCCCCEEeccC-CcCcccCCccccCCCCCcE
Q 046589 104 LLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNL-LFGQPSPQVSNLKRLKMLSLGE-NQLSGSLPSQLGVLTWLET 181 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~L~~L~~ 181 (729)
...++.+++++|.+++..+..+.++++|++|++++|. ++.+.+..|.++++|++|++++ |++++..+..|..+++|++
T Consensus 30 ~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 30 PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp CTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 3468899999999997666689999999999999997 8888888999999999999999 9999777788999999999
Q ss_pred EEeeccCCCccCCccccCCCCCc---EEEccCC-CCCCCCccccCCCCCCC-eeeccCCcCCCCCChhhhccCCCCCEEE
Q 046589 182 LSLCSNSFTGEMPSELGDMKQLK---SLDFSGN-GFNGTVPIRLGELTRLQ-DLDLSDNLLSGSLTVSLFTNLQSLSYLD 256 (729)
Q Consensus 182 L~Ls~N~l~~~~p~~l~~l~~L~---~L~Ls~N-~l~~~~p~~l~~l~~L~-~L~L~~N~l~~~~~~~~~~~l~~L~~L~ 256 (729)
|++++|++++ +|. |..+++|+ +|++++| .++...+..|..+++|+ +|++++|.++ .++...|.. ++|++|+
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~-~~L~~L~ 185 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG-TKLDAVY 185 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT-CEEEEEE
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC-CCCCEEE
Confidence 9999999985 776 88999998 9999999 99877777899999999 9999999998 787677766 8999999
Q ss_pred ccccc-ccccCCccccCC-CcCCeecccccccc
Q 046589 257 VSNNL-LSGNIPPEISHL-KKLSDHYLGINQFT 287 (729)
Q Consensus 257 Ls~N~-l~~~~p~~l~~l-~~L~~l~l~~n~l~ 287 (729)
+++|+ ++...+..+..+ ++|+.++++.|+++
T Consensus 186 L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 186 LNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp CTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred cCCCCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 99995 987777888888 89999988888776
No 110
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.84 E-value=9.1e-20 Score=185.15 Aligned_cols=159 Identities=23% Similarity=0.256 Sum_probs=105.1
Q ss_pred CCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcE
Q 046589 331 NQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEK 410 (729)
Q Consensus 331 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~ 410 (729)
++++.|++++|.+.+..+..+..+++|++|+|++|++++..+..+..+++|++|++++|.+++.++..| ..+++|++
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~---~~l~~L~~ 111 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVF---DHLTQLDK 111 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTT---TTCTTCCE
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHh---cccCCCCE
Confidence 456677777777766666666667777777777777766666666666777777777777666555544 34456666
Q ss_pred EEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcC
Q 046589 411 LDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNL 490 (729)
Q Consensus 411 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l 490 (729)
|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|++++..+..+..+++|+.|++++|++
T Consensus 112 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 191 (251)
T 3m19_A 112 LYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191 (251)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCB
T ss_pred EEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCce
Confidence 77777776655555566667777777777766655555666666677777777777665555666666667777776666
Q ss_pred cc
Q 046589 491 SR 492 (729)
Q Consensus 491 ~~ 492 (729)
+.
T Consensus 192 ~c 193 (251)
T 3m19_A 192 DC 193 (251)
T ss_dssp CT
T ss_pred eC
Confidence 54
No 111
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.83 E-value=4.5e-20 Score=193.34 Aligned_cols=160 Identities=26% Similarity=0.347 Sum_probs=113.8
Q ss_pred cCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCc
Q 046589 112 LRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTG 191 (729)
Q Consensus 112 l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~ 191 (729)
+..+.+.+.+ ...++++|++|++++|.++... .+..+++|++|+|++|++++ ++. +..+++|++|+|++|++++
T Consensus 26 l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~l~--~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~ 99 (308)
T 1h6u_A 26 AGKSNVTDTV--TQADLDGITTLSAFGTGVTTIE--GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN 99 (308)
T ss_dssp TTCSSTTSEE--CHHHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC
T ss_pred hCCCCcCcee--cHHHcCCcCEEEeeCCCccCch--hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC
Confidence 3344444432 2346778899999988887753 57788889999999998874 444 8888889999998888874
Q ss_pred cCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCcccc
Q 046589 192 EMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEIS 271 (729)
Q Consensus 192 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 271 (729)
+ ..+.++++|++|++++|.+++ ++. +..+++|++|++++|.+++ ++. +..+++|++|++++|.+++. +. +.
T Consensus 100 -~-~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~ 170 (308)
T 1h6u_A 100 -V-SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITN-ISP--LAGLTNLQYLSIGNAQVSDL-TP-LA 170 (308)
T ss_dssp -C-GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG--GGGCTTCCEEECCSSCCCCC-GG-GT
T ss_pred -c-hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCc-Ccc--ccCCCCccEEEccCCcCCCC-hh-hc
Confidence 3 368888888888888888875 333 7888888888888888873 332 67788888888888877642 22 45
Q ss_pred CCCcCCeeccccccc
Q 046589 272 HLKKLSDHYLGINQF 286 (729)
Q Consensus 272 ~l~~L~~l~l~~n~l 286 (729)
.+++|+.++++.|.+
T Consensus 171 ~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 171 NLSKLTTLKADDNKI 185 (308)
T ss_dssp TCTTCCEEECCSSCC
T ss_pred CCCCCCEEECCCCcc
Confidence 555555555444443
No 112
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.83 E-value=1.8e-20 Score=196.36 Aligned_cols=140 Identities=21% Similarity=0.307 Sum_probs=99.0
Q ss_pred EECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCCCC
Q 046589 134 LNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGF 213 (729)
Q Consensus 134 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 213 (729)
+.+..+.+++.. .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++. +. +.++++|++|++++|.+
T Consensus 24 ~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l 97 (308)
T 1h6u_A 24 IAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPL 97 (308)
T ss_dssp HHTTCSSTTSEE--CHHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCC
T ss_pred HHhCCCCcCcee--cHHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcC
Confidence 345555554432 2345778999999999887 455 588888999999999988754 43 88888999999999988
Q ss_pred CCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeeccccccc
Q 046589 214 NGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQF 286 (729)
Q Consensus 214 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l 286 (729)
++ ++ .+..+++|++|++++|.+++ ++ .+..+++|++|++++|.+++..+ +..+++|+.++++.|.+
T Consensus 98 ~~-~~-~~~~l~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l 163 (308)
T 1h6u_A 98 KN-VS-AIAGLQSIKTLDLTSTQITD-VT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQV 163 (308)
T ss_dssp SC-CG-GGTTCTTCCEEECTTSCCCC-CG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred CC-ch-hhcCCCCCCEEECCCCCCCC-ch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcC
Confidence 74 33 68888888888888888874 43 27788888888888887764322 44555555555444443
No 113
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=1.3e-19 Score=178.31 Aligned_cols=180 Identities=24% Similarity=0.268 Sum_probs=147.8
Q ss_pred EEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccC
Q 046589 109 YQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNS 188 (729)
Q Consensus 109 ~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~ 188 (729)
.++.+++.+. .+|..+ .++|++|++++|++++.++..|..+++|++|++++|++++..+..|..+++|++|+|++|+
T Consensus 11 ~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 11 TVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp EEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 3455556655 344433 4589999999999998888888899999999999999986666678899999999999999
Q ss_pred CCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCc
Q 046589 189 FTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPP 268 (729)
Q Consensus 189 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 268 (729)
+++..+..|.++++|++|++++|++++..+..+..+++|++|++++|.++ .++...|..+++|++|++++|.+.+
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc-eeCHHHhccCCCccEEEecCCCeec----
Confidence 99777777899999999999999999777777899999999999999998 5665778889999999999998764
Q ss_pred cccCCCcCCeeccccccccccccccccCCCC
Q 046589 269 EISHLKKLSDHYLGINQFTGSIQSELGNCKN 299 (729)
Q Consensus 269 ~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~ 299 (729)
.++.|+.+.++.|+++|.+|..++.++.
T Consensus 163 ---~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ---TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ---CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ---CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 3456888888889999888887766543
No 114
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.82 E-value=1.1e-20 Score=197.14 Aligned_cols=136 Identities=24% Similarity=0.410 Sum_probs=114.8
Q ss_pred cccccccCCCCCCcceEEEeec-CCCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTM-PDGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~-~~~~~~avk~----------------------------------------------- 624 (729)
+.|...+.||+|+||+||+|.. .+|+.||||.
T Consensus 20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 99 (297)
T 3fxz_A 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (297)
T ss_dssp GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECC
Confidence 4566677899999999999986 5888999996
Q ss_pred -----------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceecccc
Q 046589 625 -----------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS 663 (729)
Q Consensus 625 -----------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~ 663 (729)
|+||+||+++.++.+|++|||+++....... ......+
T Consensus 100 ~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~g 178 (297)
T 3fxz_A 100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSTMVG 178 (297)
T ss_dssp TTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-CBCCCCS
T ss_pred CCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-ccCCccC
Confidence 9999999999999999999999987654222 2334578
Q ss_pred cccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcc------------------h------HHHHhhcccCCC
Q 046589 664 AISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPKFE------------------D------KDIVVGCVSDNP 719 (729)
Q Consensus 664 ~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~------------------~------~~l~~~c~~~~p 719 (729)
+..|+|||......++.++||||+||++|||+||+.|+...-. + .+++.+|++.+|
T Consensus 179 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp 258 (297)
T 3fxz_A 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDV 258 (297)
T ss_dssp CGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSST
T ss_pred CcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCCh
Confidence 8999999998888899999999999999999999999863110 0 179999999999
Q ss_pred CCCCCccccC
Q 046589 720 IAKPGMLRVQ 729 (729)
Q Consensus 720 ~~Rp~~~~v~ 729 (729)
++|||++|++
T Consensus 259 ~~Rps~~ell 268 (297)
T 3fxz_A 259 EKRGSAKELL 268 (297)
T ss_dssp TTSCCHHHHT
T ss_pred hHCcCHHHHh
Confidence 9999999875
No 115
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.82 E-value=6.8e-21 Score=200.05 Aligned_cols=134 Identities=22% Similarity=0.386 Sum_probs=110.4
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
+.|.....+|.|+||+||+|... +|+.||||+
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 46777788999999999999986 889999995
Q ss_pred ---------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCccee
Q 046589 625 ---------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHIST 659 (729)
Q Consensus 625 ---------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~ 659 (729)
|+||+||+++.++.+||+|||+++..... ....
T Consensus 137 e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~--~~~~ 214 (311)
T 3p1a_A 137 ELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA--GAGE 214 (311)
T ss_dssp ECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC--------
T ss_pred eccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccC--CCCc
Confidence 99999999999999999999998875432 2223
Q ss_pred cccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC--Ccc----------------h--HHHHhhcccCCC
Q 046589 660 DVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGP--KFE----------------D--KDIVVGCVSDNP 719 (729)
Q Consensus 660 ~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~--~~~----------------~--~~l~~~c~~~~p 719 (729)
...+|.+|+|||...+ .++.++|||||||++|||++|+.|+.. .|. + .+++.+|++.+|
T Consensus 215 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 293 (311)
T 3p1a_A 215 VQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDP 293 (311)
T ss_dssp CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSST
T ss_pred ccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCCcccccCCCHHHHHHHHHHcCCCh
Confidence 4568899999998764 789999999999999999999877652 111 1 179999999999
Q ss_pred CCCCCccccC
Q 046589 720 IAKPGMLRVQ 729 (729)
Q Consensus 720 ~~Rp~~~~v~ 729 (729)
++|||++|++
T Consensus 294 ~~Rpt~~ell 303 (311)
T 3p1a_A 294 KLRATAEALL 303 (311)
T ss_dssp TTSCCHHHHH
T ss_pred hhCcCHHHHH
Confidence 9999999874
No 116
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.82 E-value=8.8e-21 Score=201.80 Aligned_cols=137 Identities=22% Similarity=0.339 Sum_probs=106.7
Q ss_pred cccccccCCCCCCcceEEEeec-CCCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTM-PDGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~-~~~~~~avk~----------------------------------------------- 624 (729)
+.|.....+|+|+||+||+|+. .+|+.||||.
T Consensus 10 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~ 89 (347)
T 3zgw_A 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEY 89 (347)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeC
Confidence 4566778899999999999986 5889999995
Q ss_pred -------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceecc
Q 046589 625 -------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDV 661 (729)
Q Consensus 625 -------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~ 661 (729)
|+||+||+++.++.+|++|||+++.............
T Consensus 90 ~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~ 169 (347)
T 3zgw_A 90 CPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTC 169 (347)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------------
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcccccc
Confidence 9999999999999999999999886543322223456
Q ss_pred cccccccCccccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCc------------------ch---HHHHhhcccCCC
Q 046589 662 ASAISYVPPEYGRARKA-NERDNIYRFGVVLLELVIRKQPTGPKF------------------ED---KDIVVGCVSDNP 719 (729)
Q Consensus 662 ~~~~~y~ape~~~~~~~-~~~~Dv~s~G~vl~el~tg~~p~~~~~------------------~~---~~l~~~c~~~~p 719 (729)
.+|.+|+|||...+..+ +.++||||+||++|||+||+.|+...- .. .+++.+|+..+|
T Consensus 170 ~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP 249 (347)
T 3zgw_A 170 CGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDP 249 (347)
T ss_dssp --CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred CCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcccCH
Confidence 78999999998876664 889999999999999999999987311 11 179999999999
Q ss_pred CCCCCccccC
Q 046589 720 IAKPGMLRVQ 729 (729)
Q Consensus 720 ~~Rp~~~~v~ 729 (729)
++|||++|++
T Consensus 250 ~~Rps~~eil 259 (347)
T 3zgw_A 250 KKRISMKNLL 259 (347)
T ss_dssp GGSCCHHHHH
T ss_pred hHCcCHHHHh
Confidence 9999999873
No 117
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.82 E-value=9.2e-21 Score=200.35 Aligned_cols=137 Identities=40% Similarity=0.759 Sum_probs=116.4
Q ss_pred cccccccCCCCCCcceEEEeecCCCCceeeec------------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMPDGKTVAVKK------------------------------------------------ 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~~~~~~avk~------------------------------------------------ 624 (729)
++|.....+|+|+||.||+|...+|+.||||+
T Consensus 30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 109 (326)
T 3uim_A 30 DNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYM 109 (326)
T ss_dssp TSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECC
T ss_pred hccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEec
Confidence 56777888999999999999988899999996
Q ss_pred -------------------------------------------------cccccceEecCCccEEEeecCCccccCCCCC
Q 046589 625 -------------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKS 655 (729)
Q Consensus 625 -------------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~ 655 (729)
|+||+||+++.++.+|++|||+++.......
T Consensus 110 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 189 (326)
T 3uim_A 110 ANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 189 (326)
T ss_dssp TTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSS
T ss_pred cCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccc
Confidence 9999999999999999999999987654333
Q ss_pred cceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC--------------------------------
Q 046589 656 HISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGP-------------------------------- 703 (729)
Q Consensus 656 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~-------------------------------- 703 (729)
.......++.+|+|||......++.++||||+||++|||+||+.|+..
T Consensus 190 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (326)
T 3uim_A 190 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL 269 (326)
T ss_dssp CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTC
T ss_pred cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhh
Confidence 334455689999999988777889999999999999999999999840
Q ss_pred --Ccch------HHHHhhcccCCCCCCCCccccC
Q 046589 704 --KFED------KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 --~~~~------~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.+.. .+++..|++.+|++|||+++|+
T Consensus 270 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell 303 (326)
T 3uim_A 270 QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303 (326)
T ss_dssp TTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHH
Confidence 0000 0788999999999999999874
No 118
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.82 E-value=1e-20 Score=214.15 Aligned_cols=102 Identities=19% Similarity=0.359 Sum_probs=86.7
Q ss_pred cccccceEecCC--ccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLNED--FDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~--~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++.+ +.+||+|||+|+..... .......||+.|||||...+..|+.++||||+||++|||++|+.||.
T Consensus 280 DlKp~Nill~~~~~~~vKl~DFG~a~~~~~~--~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~ 357 (573)
T 3uto_A 280 DLKPENIMFTTKRSNELKLIDFGLTAHLDPK--QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG 357 (573)
T ss_dssp CCCGGGEEESSSSCCCEEECCCSSCEECCTT--SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSC
T ss_pred cCChhhccccCCCCCCEEEeeccceeEccCC--CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 999999999854 89999999999987542 23445678999999999988899999999999999999999999986
Q ss_pred CCcc-----------------------h--HHHHhhcccCCCCCCCCcccc
Q 046589 703 PKFE-----------------------D--KDIVVGCVSDNPIAKPGMLRV 728 (729)
Q Consensus 703 ~~~~-----------------------~--~~l~~~c~~~~p~~Rp~~~~v 728 (729)
..-. + .+++.+|+..+|++|||++|+
T Consensus 358 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~ 408 (573)
T 3uto_A 358 GENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQA 408 (573)
T ss_dssp CSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred CcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 2100 0 179999999999999999886
No 119
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.82 E-value=1.8e-20 Score=198.11 Aligned_cols=135 Identities=25% Similarity=0.395 Sum_probs=113.8
Q ss_pred cccccccCCCCCCcceEEEeec-CCCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTM-PDGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~-~~~~~~avk~----------------------------------------------- 624 (729)
++|.....+|+|+||.||+|+. .+|+.||||.
T Consensus 15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 94 (328)
T 3fe3_A 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME 94 (328)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEE
Confidence 4567778899999999999997 5899999995
Q ss_pred --------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceec
Q 046589 625 --------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTD 660 (729)
Q Consensus 625 --------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~ 660 (729)
|+||+||+++.++.+||+|||+++..... .....
T Consensus 95 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~--~~~~~ 172 (328)
T 3fe3_A 95 YASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG--GKLDA 172 (328)
T ss_dssp CCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS--CGGGT
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC--Ccccc
Confidence 99999999999999999999999876532 22345
Q ss_pred ccccccccCccccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCcc-------------------h--HHHHhhcccCC
Q 046589 661 VASAISYVPPEYGRARKA-NERDNIYRFGVVLLELVIRKQPTGPKFE-------------------D--KDIVVGCVSDN 718 (729)
Q Consensus 661 ~~~~~~y~ape~~~~~~~-~~~~Dv~s~G~vl~el~tg~~p~~~~~~-------------------~--~~l~~~c~~~~ 718 (729)
..++.+|+|||...+..+ +.++||||+||++|||+||+.|+...-. . .+++.+|+..+
T Consensus 173 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~d 252 (328)
T 3fe3_A 173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLN 252 (328)
T ss_dssp TSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHCCSS
T ss_pred ccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHCCCC
Confidence 678999999998876665 4789999999999999999999874211 1 17999999999
Q ss_pred CCCCCCccccC
Q 046589 719 PIAKPGMLRVQ 729 (729)
Q Consensus 719 p~~Rp~~~~v~ 729 (729)
|++|||++|++
T Consensus 253 P~~R~t~~eil 263 (328)
T 3fe3_A 253 PIKRGTLEQIM 263 (328)
T ss_dssp TTTSCCHHHHT
T ss_pred hhHCcCHHHHh
Confidence 99999999874
No 120
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.81 E-value=1.9e-20 Score=197.50 Aligned_cols=138 Identities=36% Similarity=0.634 Sum_probs=114.9
Q ss_pred CcccccccCCCCCCcceEEEeecCCCCceeeec-----------------------------------------------
Q 046589 592 NNKFCEKNGIGGGGFGTVFKGTMPDGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 592 ~~~~~~~~~ig~g~~~~v~k~~~~~~~~~avk~----------------------------------------------- 624 (729)
+++|.....+|+|+||.||+|...+|+.||||+
T Consensus 38 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (321)
T 2qkw_B 38 TNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYM 117 (321)
T ss_dssp CCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECC
T ss_pred HhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcC
Confidence 467788889999999999999998899999996
Q ss_pred ----------------------------------------------cccccceEecCCccEEEeecCCccccCCCC-Ccc
Q 046589 625 ----------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCK-SHI 657 (729)
Q Consensus 625 ----------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~-~~~ 657 (729)
|+||+||+++.++.+|++|||+++...... ...
T Consensus 118 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 197 (321)
T 2qkw_B 118 ENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL 197 (321)
T ss_dssp TTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCC
T ss_pred CCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 999999999999999999999998654221 112
Q ss_pred eecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC----------cc---------------------
Q 046589 658 STDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK----------FE--------------------- 706 (729)
Q Consensus 658 ~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~----------~~--------------------- 706 (729)
.....++.+|+|||......++.++|||||||++|||+||+.|+... |.
T Consensus 198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (321)
T 2qkw_B 198 STVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKI 277 (321)
T ss_dssp BCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCS
T ss_pred ccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcccc
Confidence 23446788999999887778899999999999999999999987521 00
Q ss_pred -h------HHHHhhcccCCCCCCCCccccC
Q 046589 707 -D------KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 707 -~------~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. .+++.+|++.+|++|||+++|+
T Consensus 278 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell 307 (321)
T 2qkw_B 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVL 307 (321)
T ss_dssp CHHHHHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCcccCcCHHHHH
Confidence 0 0688899999999999999874
No 121
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.81 E-value=4.6e-19 Score=189.27 Aligned_cols=108 Identities=19% Similarity=0.217 Sum_probs=77.6
Q ss_pred CEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCCCCCCCCc-cccCCCCCCCe-eecc
Q 046589 156 KMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVP-IRLGELTRLQD-LDLS 233 (729)
Q Consensus 156 ~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~-L~L~ 233 (729)
+.++.++++++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+| ..|.+++++++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 57788888887 677766 3578888888888886555678888888888888888765554 35677777664 4555
Q ss_pred CCcCCCCCChhhhccCCCCCEEEcccccccccCC
Q 046589 234 DNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIP 267 (729)
Q Consensus 234 ~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 267 (729)
.|+++ .++...|..+++|++|++++|++....+
T Consensus 89 ~N~l~-~l~~~~f~~l~~L~~L~l~~n~l~~~~~ 121 (350)
T 4ay9_X 89 ANNLL-YINPEAFQNLPNLQYLLISNTGIKHLPD 121 (350)
T ss_dssp ETTCC-EECTTSBCCCTTCCEEEEEEECCSSCCC
T ss_pred CCccc-ccCchhhhhccccccccccccccccCCc
Confidence 67776 4555667777777777777777764433
No 122
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.81 E-value=2.9e-20 Score=196.14 Aligned_cols=104 Identities=21% Similarity=0.322 Sum_probs=87.0
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++.+|++|||+++....... ......++.+|+|||......++.++|||||||++|||+||+.|+...
T Consensus 166 Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~ 244 (321)
T 2c30_A 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD 244 (321)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred CCCHHHEEECCCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999987653221 223457889999999988888999999999999999999999997521
Q ss_pred ----------------cc------h--HHHHhhcccCCCCCCCCccccC
Q 046589 705 ----------------FE------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 705 ----------------~~------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+. + .+++.+|++.+|++|||+++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 293 (321)
T 2c30_A 245 SPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELL 293 (321)
T ss_dssp CHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred CHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 00 0 1799999999999999999874
No 123
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=3e-19 Score=175.82 Aligned_cols=177 Identities=24% Similarity=0.248 Sum_probs=133.1
Q ss_pred CEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEc
Q 046589 334 ESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDL 413 (729)
Q Consensus 334 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L 413 (729)
+.++.+++.+.. +|..+ .++|++|++++|++++..+..+..+++|++|++++|++++.++..| ..+++|++|+|
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~---~~l~~L~~L~L 83 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVF---NKLTSLTYLNL 83 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT---TTCTTCCEEEC
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhc---CCCCCcCEEEC
Confidence 345566665542 33322 3578888888888887666667788888888888888876665554 45667888888
Q ss_pred CCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCccc
Q 046589 414 SSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLSRP 493 (729)
Q Consensus 414 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~ 493 (729)
++|++++..+..+..+++|++|++++|++++..+..+..+++|+.|+|++|++++..+..+..+++|+.|++++|++.+
T Consensus 84 s~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~- 162 (208)
T 2o6s_A 84 STNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC- 162 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-
T ss_pred CCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-
Confidence 8888887666678888889999998888886666667888889999999998887777678888889999999987764
Q ss_pred ccccccccccccCCCCcccCCCCCeEecCCCcCcccCCchhh
Q 046589 494 ILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPIPKELG 535 (729)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~p~~~~ 535 (729)
.+++++.++++.|+++|.+|..++
T Consensus 163 ------------------~~~~l~~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 163 ------------------TCPGIRYLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp ------------------CTTTTHHHHHHHHHCTTTBBCTTS
T ss_pred ------------------CCCCHHHHHHHHHhCCceeeccCc
Confidence 345677778888888877766554
No 124
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.81 E-value=6.2e-19 Score=188.25 Aligned_cols=124 Identities=16% Similarity=0.118 Sum_probs=92.7
Q ss_pred cEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCC-ccccCCCCCcE-EEcc
Q 046589 132 RVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMP-SELGDMKQLKS-LDFS 209 (729)
Q Consensus 132 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~-L~Ls 209 (729)
++++-++++++.++. .+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+| .+|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt~iP~-~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVTEIPS-DL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCCSCCT-TC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCCccCc-Cc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 567788888887643 33 2578899999999885555678889999999999998866555 46788888765 6667
Q ss_pred CCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEccc
Q 046589 210 GNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSN 259 (729)
Q Consensus 210 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~ 259 (729)
+|+++...|..|..+++|++|++++|+++ .++...+....++..|++.+
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~l~~l~l~~ 137 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQD 137 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCS-SCCCCTTCCBSSCEEEEEES
T ss_pred CCcccccCchhhhhccccccccccccccc-cCCchhhcccchhhhhhhcc
Confidence 78888777888888999999999999887 44445555556666777654
No 125
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.81 E-value=3.4e-20 Score=196.44 Aligned_cols=103 Identities=19% Similarity=0.484 Sum_probs=85.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKA-NERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~-~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++..... .......++.+|+|||...+..+ +.++||||+||++|||+||+.|+..
T Consensus 133 Dlkp~NIll~~~~~~kl~DFG~s~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~ 210 (336)
T 3h4j_B 133 DLKPENLLLDDNLNVKIADFGLSNIMTDG--NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD 210 (336)
T ss_dssp CCSTTTEEECTTCCEEECCSSCTBTTTTS--BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBC
T ss_pred CCchhhEEEcCCCCEEEEEeccceeccCC--cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999876532 22234578899999998876655 7899999999999999999999863
Q ss_pred Ccc-------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 704 KFE-------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~~~-------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... + .+++..|+..+|.+|||++|++
T Consensus 211 ~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil 257 (336)
T 3h4j_B 211 EFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIR 257 (336)
T ss_dssp SSSTTCBCCCCSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHT
T ss_pred ccHHHHHHHHHcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 110 1 1899999999999999999874
No 126
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.80 E-value=4.8e-20 Score=193.52 Aligned_cols=136 Identities=24% Similarity=0.394 Sum_probs=112.6
Q ss_pred cccccccCCCCCCcceEEEeecCCCCceeeec------------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMPDGKTVAVKK------------------------------------------------ 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~~~~~~avk~------------------------------------------------ 624 (729)
+.|.....+|+|+||+||+|+..+|+.||||.
T Consensus 21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 100 (311)
T 3niz_A 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF 100 (311)
T ss_dssp CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEEC
T ss_pred hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcC
Confidence 56777788999999999999998899999996
Q ss_pred -------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceecc
Q 046589 625 -------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDV 661 (729)
Q Consensus 625 -------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~ 661 (729)
|+||+||+++.++.+|++|||+++...... ......
T Consensus 101 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~ 179 (311)
T 3niz_A 101 MEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV-RSYTHE 179 (311)
T ss_dssp CSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC-C---CC
T ss_pred CCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc-ccccCC
Confidence 999999999999999999999998764321 223345
Q ss_pred cccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCC--------------------Ccc--------------
Q 046589 662 ASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQPTGP--------------------KFE-------------- 706 (729)
Q Consensus 662 ~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p~~~--------------------~~~-------------- 706 (729)
.++.+|+|||...+ ..++.++||||+||++|||+||+.|+.. .|.
T Consensus 180 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (311)
T 3niz_A 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQ 259 (311)
T ss_dssp CCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCC
T ss_pred cccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccc
Confidence 67899999997755 5679999999999999999999999852 010
Q ss_pred ---------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 707 ---------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 707 ---------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+ .+++.+|++.+|++|||++|++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 299 (311)
T 3niz_A 260 VFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAM 299 (311)
T ss_dssp CCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred cccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 0 1699999999999999999874
No 127
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.80 E-value=3.4e-20 Score=197.56 Aligned_cols=136 Identities=22% Similarity=0.419 Sum_probs=107.1
Q ss_pred cccccccCCCCCCcceEEEeecCCCCceeeec------------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMPDGKTVAVKK------------------------------------------------ 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~~~~~~avk~------------------------------------------------ 624 (729)
+.|.....||+|+||.||+|...+++.||||.
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 45677788999999999999998899999995
Q ss_pred --------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCc-cee
Q 046589 625 --------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSH-IST 659 (729)
Q Consensus 625 --------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~-~~~ 659 (729)
|+||+||+++ ++.+||+|||+++........ ...
T Consensus 89 e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~ 167 (343)
T 3dbq_A 89 ECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKD 167 (343)
T ss_dssp CCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----------
T ss_pred eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcccccccCC
Confidence 9999999997 578999999999876532221 123
Q ss_pred cccccccccCccccCC-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCcc----------------------
Q 046589 660 DVASAISYVPPEYGRA-----------RKANERDNIYRFGVVLLELVIRKQPTGPKFE---------------------- 706 (729)
Q Consensus 660 ~~~~~~~y~ape~~~~-----------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~---------------------- 706 (729)
...+|.+|+|||.... ..++.++|||||||++|||+||+.|+.....
T Consensus 168 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
T 3dbq_A 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE 247 (343)
T ss_dssp --CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSC
T ss_pred CCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCC
Confidence 4578999999997643 6788999999999999999999999863110
Q ss_pred --hHHHHhhcccCCCCCCCCccccC
Q 046589 707 --DKDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 707 --~~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
-.+++..|++.+|++|||+++++
T Consensus 248 ~~l~~li~~~L~~dp~~Rpt~~e~l 272 (343)
T 3dbq_A 248 KDLQDVLKCCLKRDPKQRISIPELL 272 (343)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred HHHHHHHHHHcCCChhHCCCHHHHH
Confidence 01799999999999999999873
No 128
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.80 E-value=4.2e-20 Score=193.83 Aligned_cols=137 Identities=28% Similarity=0.478 Sum_probs=111.7
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
+++...+.+|+|+||+||+|... +++.||+|.
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 45667788999999999999985 788999995
Q ss_pred -------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcc----
Q 046589 625 -------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHI---- 657 (729)
Q Consensus 625 -------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~---- 657 (729)
|+||+||+++.++.+|++|||+++.........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 169 (310)
T 3s95_A 90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR 169 (310)
T ss_dssp TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC----------
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccc
Confidence 999999999999999999999998764322111
Q ss_pred ---------eecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcc----------------------
Q 046589 658 ---------STDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPKFE---------------------- 706 (729)
Q Consensus 658 ---------~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~---------------------- 706 (729)
.....+|.+|+|||......++.++|||||||++|||++|..|+.....
T Consensus 170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (310)
T 3s95_A 170 SLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCP 249 (310)
T ss_dssp ----------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCCTTCC
T ss_pred cccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccCCCCCC
Confidence 0134688999999998888899999999999999999999988652100
Q ss_pred --hHHHHhhcccCCCCCCCCccccC
Q 046589 707 --DKDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 707 --~~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
-.+++.+||+.+|++|||+++++
T Consensus 250 ~~l~~li~~~l~~dP~~Rps~~~l~ 274 (310)
T 3s95_A 250 PSFFPITVRCCDLDPEKRPSFVKLE 274 (310)
T ss_dssp TTHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHHHHHccCChhhCcCHHHHH
Confidence 01799999999999999999863
No 129
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.80 E-value=1.8e-20 Score=207.53 Aligned_cols=137 Identities=28% Similarity=0.498 Sum_probs=112.9
Q ss_pred cccccccCCCCCCcceEEEeecCCCCceeeec------------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMPDGKTVAVKK------------------------------------------------ 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~~~~~~avk~------------------------------------------------ 624 (729)
+.+...+.||+|+||.||+|.+.++..||||.
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~~~~g 267 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKG 267 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECCCTTC
T ss_pred HHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEeecCCC
Confidence 45666778999999999999998888999996
Q ss_pred -----------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceecccc
Q 046589 625 -----------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS 663 (729)
Q Consensus 625 -----------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~ 663 (729)
|+||+||+++.++.+||+|||+++..............+
T Consensus 268 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~ 347 (454)
T 1qcf_A 268 SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 347 (454)
T ss_dssp BHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSS
T ss_pred cHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcc
Confidence 999999999999999999999998764321111223445
Q ss_pred cccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCc--------------------chH--HHHhhcccCCCC
Q 046589 664 AISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTGPKF--------------------EDK--DIVVGCVSDNPI 720 (729)
Q Consensus 664 ~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~--------------------~~~--~l~~~c~~~~p~ 720 (729)
+..|+|||......++.++|||||||++|||+| |+.|+...- .+. +++..||..+|+
T Consensus 348 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 427 (454)
T 1qcf_A 348 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPE 427 (454)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGG
T ss_pred cccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChh
Confidence 678999998877889999999999999999999 998875210 011 799999999999
Q ss_pred CCCCccccC
Q 046589 721 AKPGMLRVQ 729 (729)
Q Consensus 721 ~Rp~~~~v~ 729 (729)
+||||++|+
T Consensus 428 ~RPt~~~i~ 436 (454)
T 1qcf_A 428 ERPTFEYIQ 436 (454)
T ss_dssp GSCCHHHHH
T ss_pred HCcCHHHHH
Confidence 999999873
No 130
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.80 E-value=7.1e-20 Score=194.70 Aligned_cols=135 Identities=27% Similarity=0.436 Sum_probs=113.9
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
++|.....||+|+||.||+|+.. +|+.||||.
T Consensus 17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv 96 (345)
T 1xjd_A 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 96 (345)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEE
Confidence 56777788999999999999985 788999995
Q ss_pred ----------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcce
Q 046589 625 ----------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHIS 658 (729)
Q Consensus 625 ----------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~ 658 (729)
|+||+||+++.++++|++|||+++...... ...
T Consensus 97 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-~~~ 175 (345)
T 1xjd_A 97 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD-AKT 175 (345)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-CCB
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC-Ccc
Confidence 999999999999999999999998643211 223
Q ss_pred ecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc------------------c-h--HHHHhhcccC
Q 046589 659 TDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPKF------------------E-D--KDIVVGCVSD 717 (729)
Q Consensus 659 ~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~------------------~-~--~~l~~~c~~~ 717 (729)
....||..|+|||...+..++.++||||+||++|||++|+.|+...- . + .+++.+|+..
T Consensus 176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~ 255 (345)
T 1xjd_A 176 NTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVR 255 (345)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCS
T ss_pred cCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccCHHHHHHHHHHhcC
Confidence 34678999999999888889999999999999999999999986311 1 1 1799999999
Q ss_pred CCCCCCCcc-cc
Q 046589 718 NPIAKPGML-RV 728 (729)
Q Consensus 718 ~p~~Rp~~~-~v 728 (729)
+|++||+++ ++
T Consensus 256 dp~~R~~~~~~i 267 (345)
T 1xjd_A 256 EPEKRLGVRGDI 267 (345)
T ss_dssp SGGGSBTTBSCG
T ss_pred CHhHcCCChHHH
Confidence 999999997 65
No 131
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.80 E-value=1.2e-19 Score=192.49 Aligned_cols=103 Identities=22% Similarity=0.336 Sum_probs=85.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++.+|++|||+++...... .......+|..|+|||......++.++||||+||++|||+||+.|+...
T Consensus 130 Dlkp~NIll~~~g~vkL~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 208 (337)
T 1o6l_A 130 DIKLENLMLDKDGHIKITDFGLCKEGISDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208 (337)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCBCSCCTT-CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCCHHHEEECCCCCEEEeeccchhhcccCC-CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC
Confidence 999999999999999999999998643222 2233467899999999988888999999999999999999999998631
Q ss_pred cc-------------------h--HHHHhhcccCCCCCCC-----Ccccc
Q 046589 705 FE-------------------D--KDIVVGCVSDNPIAKP-----GMLRV 728 (729)
Q Consensus 705 ~~-------------------~--~~l~~~c~~~~p~~Rp-----~~~~v 728 (729)
-. + .+++.+|++.+|++|| +++|+
T Consensus 209 ~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei 258 (337)
T 1o6l_A 209 DHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV 258 (337)
T ss_dssp SHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHH
Confidence 10 1 1799999999999999 77665
No 132
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.79 E-value=7.8e-20 Score=198.22 Aligned_cols=78 Identities=33% Similarity=0.446 Sum_probs=63.5
Q ss_pred cccccceEecCCccEEEeecCCccccCCCC--------------------CcceecccccccccCccccCC-CCCCchhh
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCK--------------------SHISTDVASAISYVPPEYGRA-RKANERDN 683 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~--------------------~~~~~~~~~~~~y~ape~~~~-~~~~~~~D 683 (729)
|+||+||+++.++.+|++|||+|+...... ....+...+|.+|+|||...+ ..++.++|
T Consensus 134 Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~D 213 (388)
T 3oz6_A 134 DMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGID 213 (388)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHH
T ss_pred CCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhh
Confidence 999999999999999999999998653210 111234578999999998765 67899999
Q ss_pred HHHHHHHHHHHHhCCCCCC
Q 046589 684 IYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 684 v~s~G~vl~el~tg~~p~~ 702 (729)
|||+||++|||+||+.||.
T Consensus 214 iwSlG~il~ell~g~~pf~ 232 (388)
T 3oz6_A 214 MWSLGCILGEILCGKPIFP 232 (388)
T ss_dssp HHHHHHHHHHHHHSSCSCC
T ss_pred HHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999985
No 133
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.79 E-value=4.6e-20 Score=193.44 Aligned_cols=104 Identities=32% Similarity=0.595 Sum_probs=77.9
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++.+|++|||+++..... ........++..|+|||......++.++||||+||++|||+||+.|+...
T Consensus 164 Dikp~NIll~~~~~~kL~Dfg~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~ 242 (309)
T 3p86_A 164 NLKSPNLLVDKKYTVKVCDFGLSRLKAST-FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL 242 (309)
T ss_dssp TCCGGGEEECTTCCEEECCCC------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred CCChhhEEEeCCCcEEECCCCCCcccccc-ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999865432 11223457889999999988888899999999999999999999998631
Q ss_pred c---------------------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 705 F---------------------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 705 ~---------------------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
- .+ .+++.+||+.+|++|||+++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll 290 (309)
T 3p86_A 243 NPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIM 290 (309)
T ss_dssp CHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 0 01 1799999999999999999873
No 134
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.79 E-value=5.9e-19 Score=198.67 Aligned_cols=196 Identities=24% Similarity=0.305 Sum_probs=141.3
Q ss_pred CCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEE
Q 046589 332 QMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKL 411 (729)
Q Consensus 332 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L 411 (729)
+++.|++++|.+.+ +|..+ .++|++|+|++|+++ .+| ..+++|+.|++++|.+++. |. +.. +|++|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~i-p~-l~~-----~L~~L 125 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLSTL-PE-LPA-----SLKHL 125 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCC-CC-CCT-----TCCEE
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCCc-ch-hhc-----CCCEE
Confidence 67888888888876 56544 367888888888887 456 4467888888888888873 43 322 68888
Q ss_pred EcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCc
Q 046589 412 DLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLS 491 (729)
Q Consensus 412 ~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~ 491 (729)
+|++|++++ +|. .+++|+.|++++|.+++ +|. .+++|+.|+|++|++++ +|. +. ++|+.|+|++|+|+
T Consensus 126 ~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 126 DVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE 193 (571)
T ss_dssp ECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS
T ss_pred ECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC
Confidence 888888886 555 67888888888888885 665 56788888888888886 565 55 78888888888887
Q ss_pred ccccccccccccccCCCCcccCCCCCeEecCCCcCcccCCchhhccccccccccccccccccCCceeeccCCcceeeccc
Q 046589 492 RPILSKHSSYFHEVNIPDLSYSHNYRKFDLSYNMLSGPIPKELGSCVVVLTGYIPRSLGHLSCSVKLNLSGNKLSVLVPT 571 (729)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ldls~N~l~g~~p~~~~~~~~ll~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~ 571 (729)
.+|. +.. .+ ......++.|++++|+++ .+|..+..+++|+.|+|++|++++.+|.
T Consensus 194 -~lp~-~~~-----~L--~~~~~~L~~L~Ls~N~l~----------------~lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 194 -SLPA-VPV-----RN--HHSEETEIFFRCRENRIT----------------HIPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp -SCCC-CC---------------CCEEEECCSSCCC----------------CCCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred -chhh-HHH-----hh--hcccccceEEecCCCcce----------------ecCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 4444 220 00 011223388888888886 3556666788888888888888888887
Q ss_pred ccccccc
Q 046589 572 SFGNLNG 578 (729)
Q Consensus 572 ~~~~l~~ 578 (729)
.|..++.
T Consensus 249 ~l~~l~~ 255 (571)
T 3cvr_A 249 SLSQQTA 255 (571)
T ss_dssp HHHHHHH
T ss_pred HHHHhhc
Confidence 7766543
No 135
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.79 E-value=2.7e-20 Score=196.49 Aligned_cols=105 Identities=30% Similarity=0.389 Sum_probs=83.5
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc-ceecccccccccCccccCC-----CCCCchhhHHHHHHHHHHHHhCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH-ISTDVASAISYVPPEYGRA-----RKANERDNIYRFGVVLLELVIRK 698 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~-~~~~~~~~~~y~ape~~~~-----~~~~~~~Dv~s~G~vl~el~tg~ 698 (729)
|+||+||+++.++.+|++|||+++........ ......+|.+|+|||.... ..++.++|||||||++|||+||+
T Consensus 156 Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~ 235 (322)
T 3soc_A 156 DIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRC 235 (322)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCC
Confidence 89999999999999999999999876532221 1223578899999997764 34567889999999999999999
Q ss_pred CCCCCC-------cc-------------------------------------hHHHHhhcccCCCCCCCCccccC
Q 046589 699 QPTGPK-------FE-------------------------------------DKDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 699 ~p~~~~-------~~-------------------------------------~~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.|+... +. -.+++.+||+.+|++|||+++|+
T Consensus 236 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell 310 (322)
T 3soc_A 236 TAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVG 310 (322)
T ss_dssp TTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHH
Confidence 987521 10 01689999999999999999874
No 136
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.79 E-value=6.9e-20 Score=196.84 Aligned_cols=104 Identities=19% Similarity=0.219 Sum_probs=85.3
Q ss_pred cccccceEec--CCccEEEeecCCccccCCCCCc------ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh
Q 046589 625 DIKASNILLN--EDFDAKVLDFGLARLISDCKSH------ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI 696 (729)
Q Consensus 625 dlk~~nill~--~~~~~kl~dfgl~~~~~~~~~~------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t 696 (729)
|+||+||+++ .++.+||+|||+++........ ......+|..|+|||...+..++.++|||||||++|||+|
T Consensus 177 Dlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~ 256 (364)
T 3op5_A 177 DIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLT 256 (364)
T ss_dssp CCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHh
Confidence 9999999999 8899999999999875432111 1123458899999999888889999999999999999999
Q ss_pred CCCCCCCCc------------------------------ch--HHHHhhcccCCCCCCCCcccc
Q 046589 697 RKQPTGPKF------------------------------ED--KDIVVGCVSDNPIAKPGMLRV 728 (729)
Q Consensus 697 g~~p~~~~~------------------------------~~--~~l~~~c~~~~p~~Rp~~~~v 728 (729)
|+.|+.... .+ .+++..||+.+|++||++++|
T Consensus 257 g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l 320 (364)
T 3op5_A 257 GHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENL 320 (364)
T ss_dssp SCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred CCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHH
Confidence 999987310 00 168999999999999999886
No 137
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.79 E-value=7.8e-20 Score=198.14 Aligned_cols=136 Identities=23% Similarity=0.436 Sum_probs=108.4
Q ss_pred cccccccCCCCCCcceEEEeecCCCCceeeec------------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMPDGKTVAVKK------------------------------------------------ 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~~~~~~avk~------------------------------------------------ 624 (729)
..|.....||+|+||.||+|...+++.||||.
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 45777788999999999999998899999995
Q ss_pred --------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCc-cee
Q 046589 625 --------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSH-IST 659 (729)
Q Consensus 625 --------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~-~~~ 659 (729)
|+||+||+++ ++.+||+|||+++........ ...
T Consensus 136 E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~ 214 (390)
T 2zmd_A 136 ECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKD 214 (390)
T ss_dssp ECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---------C
T ss_pred ecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCC
Confidence 9999999996 588999999999876532221 123
Q ss_pred cccccccccCccccCC-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCc---------------------ch
Q 046589 660 DVASAISYVPPEYGRA-----------RKANERDNIYRFGVVLLELVIRKQPTGPKF---------------------ED 707 (729)
Q Consensus 660 ~~~~~~~y~ape~~~~-----------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~---------------------~~ 707 (729)
...+|++|+|||.... ..++.++|||||||++|||++|+.|+.... ..
T Consensus 215 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (390)
T 2zmd_A 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE 294 (390)
T ss_dssp CSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSC
T ss_pred CCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccch
Confidence 4578999999997643 368899999999999999999999986310 00
Q ss_pred ---HHHHhhcccCCCCCCCCccccC
Q 046589 708 ---KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 708 ---~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.+++..|+..+|++|||++||+
T Consensus 295 ~~~~~li~~~L~~dP~~Rps~~ell 319 (390)
T 2zmd_A 295 KDLQDVLKCCLKRDPKQRISIPELL 319 (390)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred HHHHHHHHHHcccChhhCCCHHHHh
Confidence 1799999999999999999874
No 138
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.79 E-value=4.9e-20 Score=196.68 Aligned_cols=132 Identities=24% Similarity=0.385 Sum_probs=108.1
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
++|.....||+|+||+||+|+.. +|+.||||.
T Consensus 23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv 102 (353)
T 3txo_A 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV 102 (353)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEE
Confidence 56777788999999999999975 788999995
Q ss_pred ----------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcce
Q 046589 625 ----------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHIS 658 (729)
Q Consensus 625 ----------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~ 658 (729)
|+||+||+++.++++||+|||+++..... ....
T Consensus 103 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~-~~~~ 181 (353)
T 3txo_A 103 MEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN-GVTT 181 (353)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC------
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccC-Cccc
Confidence 99999999999999999999999864321 1223
Q ss_pred ecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcc-------------------h--HHHHhhcccC
Q 046589 659 TDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPKFE-------------------D--KDIVVGCVSD 717 (729)
Q Consensus 659 ~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~-------------------~--~~l~~~c~~~ 717 (729)
....+|..|+|||......++.++||||+||++|||+||+.|+...-. + .+++..|+..
T Consensus 182 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~lL~~ 261 (353)
T 3txo_A 182 ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTK 261 (353)
T ss_dssp ----CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCS
T ss_pred cccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Confidence 345789999999988777889999999999999999999999863111 1 1799999999
Q ss_pred CCCCCCCc
Q 046589 718 NPIAKPGM 725 (729)
Q Consensus 718 ~p~~Rp~~ 725 (729)
+|++||++
T Consensus 262 dP~~R~~~ 269 (353)
T 3txo_A 262 NPTMRLGS 269 (353)
T ss_dssp SGGGSTTS
T ss_pred CHHHccCC
Confidence 99999998
No 139
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.79 E-value=1.4e-19 Score=195.66 Aligned_cols=100 Identities=18% Similarity=0.339 Sum_probs=83.7
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++++||+|||+++...... .......||..|+|||......++.++||||+||++|||++|+.|+...
T Consensus 178 DLKp~NILl~~~g~ikL~DFGla~~~~~~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~ 256 (396)
T 4dc2_A 178 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 256 (396)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCBCCCCTT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred cCCHHHEEECCCCCEEEeecceeeecccCC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccc
Confidence 999999999999999999999998643211 2234567899999999988888999999999999999999999998521
Q ss_pred -------c---------------------ch--HHHHhhcccCCCCCCCCc
Q 046589 705 -------F---------------------ED--KDIVVGCVSDNPIAKPGM 725 (729)
Q Consensus 705 -------~---------------------~~--~~l~~~c~~~~p~~Rp~~ 725 (729)
. .. .+++..|++.+|++||++
T Consensus 257 ~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 257 GSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp TC------CCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ccccccchhhHHHHHHHHhccccCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 0 00 179999999999999996
No 140
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.79 E-value=1e-19 Score=189.58 Aligned_cols=137 Identities=23% Similarity=0.328 Sum_probs=113.4
Q ss_pred cccccccCCCCCCcceEEEeec-CCCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTM-PDGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~-~~~~~~avk~----------------------------------------------- 624 (729)
+.|...+.+|+|+||.||+|.. .+|+.||||.
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~ 89 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLG 89 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEecC
Confidence 4567778899999999999996 5888999995
Q ss_pred -----------------------------------------cccccceEecCCcc-----EEEeecCCccccCCCCCc--
Q 046589 625 -----------------------------------------DIKASNILLNEDFD-----AKVLDFGLARLISDCKSH-- 656 (729)
Q Consensus 625 -----------------------------------------dlk~~nill~~~~~-----~kl~dfgl~~~~~~~~~~-- 656 (729)
|+||+||+++.++. +|++|||+++........
T Consensus 90 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 169 (298)
T 1csn_A 90 PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH 169 (298)
T ss_dssp CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCB
T ss_pred CCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccccccc
Confidence 99999999987765 999999999876532221
Q ss_pred ----ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--c-------------------------
Q 046589 657 ----ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK--F------------------------- 705 (729)
Q Consensus 657 ----~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~--~------------------------- 705 (729)
......++..|+|||...+..++.++|||||||++|||+||+.|+... .
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (298)
T 1csn_A 170 IPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGF 249 (298)
T ss_dssp CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTS
T ss_pred ccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhC
Confidence 123456889999999988888999999999999999999999998641 0
Q ss_pred chH--HHHhhcccCCCCCCCCccccC
Q 046589 706 EDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 706 ~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.+. +++..||+.+|++|||+++|+
T Consensus 250 ~~~l~~li~~~l~~dp~~RP~~~~l~ 275 (298)
T 1csn_A 250 PEEFYKYMHYARNLAFDATPDYDYLQ 275 (298)
T ss_dssp CHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred cHHHHHHHHHHhcCCcccCCCHHHHH
Confidence 001 799999999999999999863
No 141
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.79 E-value=4e-20 Score=189.62 Aligned_cols=137 Identities=26% Similarity=0.411 Sum_probs=113.1
Q ss_pred cccccccCCCCCCcceEEEeecCCCCceeeec------------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMPDGKTVAVKK------------------------------------------------ 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~~~~~~avk~------------------------------------------------ 624 (729)
+.+.....+|+|+||.||+|...++..||||.
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISN 87 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCC
Confidence 45666778999999999999998888899986
Q ss_pred -----------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceecccc
Q 046589 625 -----------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS 663 (729)
Q Consensus 625 -----------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~ 663 (729)
|+||+||+++.++.++++|||+++..............+
T Consensus 88 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~ 167 (268)
T 3sxs_A 88 GCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKF 167 (268)
T ss_dssp CBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCC
T ss_pred CcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCc
Confidence 999999999999999999999998765432222233455
Q ss_pred cccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCc--------------------ch--HHHHhhcccCCCC
Q 046589 664 AISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTGPKF--------------------ED--KDIVVGCVSDNPI 720 (729)
Q Consensus 664 ~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~--------------------~~--~~l~~~c~~~~p~ 720 (729)
+..|+|||......++.++||||+||++||++| |+.|+...- .+ .+++..|++.+|+
T Consensus 168 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 247 (268)
T 3sxs_A 168 PVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPE 247 (268)
T ss_dssp CGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGG
T ss_pred CcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChh
Confidence 678999998877778899999999999999999 988876210 01 1799999999999
Q ss_pred CCCCccccC
Q 046589 721 AKPGMLRVQ 729 (729)
Q Consensus 721 ~Rp~~~~v~ 729 (729)
+|||+++++
T Consensus 248 ~Rps~~~ll 256 (268)
T 3sxs_A 248 KRPTFQQLL 256 (268)
T ss_dssp GSCCHHHHH
T ss_pred hCcCHHHHH
Confidence 999999873
No 142
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.79 E-value=8.3e-20 Score=189.96 Aligned_cols=137 Identities=26% Similarity=0.407 Sum_probs=112.9
Q ss_pred cccccccCCCCCCcceEEEeec-CCCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTM-PDGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~-~~~~~~avk~----------------------------------------------- 624 (729)
+.|.....+|+|+||.||+|+. .+++.||||.
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~ 88 (296)
T 4hgt_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG 88 (296)
T ss_dssp --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECCC
T ss_pred CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEccC
Confidence 5677778899999999999997 5888999994
Q ss_pred -----------------------------------------cccccceEe---cCCccEEEeecCCccccCCCCCc----
Q 046589 625 -----------------------------------------DIKASNILL---NEDFDAKVLDFGLARLISDCKSH---- 656 (729)
Q Consensus 625 -----------------------------------------dlk~~nill---~~~~~~kl~dfgl~~~~~~~~~~---- 656 (729)
|+||+||++ +.++.+|++|||+++........
T Consensus 89 ~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~ 168 (296)
T 4hgt_A 89 PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIP 168 (296)
T ss_dssp CBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCC
T ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCC
Confidence 999999999 78899999999999876532221
Q ss_pred --ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC-C-c-------------------------ch
Q 046589 657 --ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGP-K-F-------------------------ED 707 (729)
Q Consensus 657 --~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~-~-~-------------------------~~ 707 (729)
......++..|+|||...+..++.++|||||||++|||+||+.|+.. . . .+
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (296)
T 4hgt_A 169 YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPS 248 (296)
T ss_dssp CCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCH
T ss_pred CCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCH
Confidence 12245788999999998888899999999999999999999999863 1 0 00
Q ss_pred H--HHHhhcccCCCCCCCCccccC
Q 046589 708 K--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 708 ~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. +++..|++.+|++|||+++|+
T Consensus 249 ~l~~li~~~l~~~p~~Rpt~~~l~ 272 (296)
T 4hgt_A 249 EFATYLNFCRSLRFDDKPDYSYLR 272 (296)
T ss_dssp HHHHHHHHHHTSCTTCCCCHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHH
Confidence 0 799999999999999999863
No 143
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.79 E-value=1.3e-19 Score=186.46 Aligned_cols=103 Identities=21% Similarity=0.431 Sum_probs=75.3
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKA-NERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~-~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++...... ......++.+|+|||...+..+ +.++||||+||++|||+||+.|+..
T Consensus 137 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 214 (275)
T 2eue_A 137 DLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214 (275)
T ss_dssp CCSGGGEEECTTSCEEECCSSCC-----------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCChHhEEECCCCCEEEeecccceeccCcc--cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999998754321 1234467889999998766554 7899999999999999999999874
Q ss_pred Ccc-------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 704 KFE-------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~~~-------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.-. + .+++.+|++.+|++|||++|++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l 261 (275)
T 2eue_A 215 ESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 261 (275)
T ss_dssp SSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred CCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHh
Confidence 111 1 1799999999999999999875
No 144
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.79 E-value=4.1e-20 Score=192.84 Aligned_cols=105 Identities=28% Similarity=0.442 Sum_probs=82.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcc---eecccccccccCccccCCC------CCCchhhHHHHHHHHHHHH
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHI---STDVASAISYVPPEYGRAR------KANERDNIYRFGVVLLELV 695 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~---~~~~~~~~~y~ape~~~~~------~~~~~~Dv~s~G~vl~el~ 695 (729)
|+||+||+++.++.+|++|||+++......... .....+|.+|+|||..... .++.++|||||||++|||+
T Consensus 138 Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~ 217 (301)
T 3q4u_A 138 DLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217 (301)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHH
Confidence 899999999999999999999998765332221 1234788999999987654 4457899999999999999
Q ss_pred hC----------CCCCCCC----------------------cc-----------hHHHHhhcccCCCCCCCCccccC
Q 046589 696 IR----------KQPTGPK----------------------FE-----------DKDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 696 tg----------~~p~~~~----------------------~~-----------~~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|| +.|+... .. -.+++..||+.+|++|||+++|+
T Consensus 218 tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~ 294 (301)
T 3q4u_A 218 RRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIK 294 (301)
T ss_dssp TTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred hhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHH
Confidence 99 7776420 00 01799999999999999999873
No 145
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.79 E-value=3.2e-20 Score=190.48 Aligned_cols=137 Identities=27% Similarity=0.443 Sum_probs=112.4
Q ss_pred cccccccCCCCCCcceEEEeecCCCCceeeec------------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMPDGKTVAVKK------------------------------------------------ 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~~~~~~avk~------------------------------------------------ 624 (729)
+.+.....+|+|+||.||+|...+++.||||.
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 89 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 89 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCC
Confidence 45666678999999999999998888999996
Q ss_pred -----------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceecccc
Q 046589 625 -----------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS 663 (729)
Q Consensus 625 -----------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~ 663 (729)
|+||+||+++.++.+|++|||+++..............+
T Consensus 90 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 169 (269)
T 4hcu_A 90 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF 169 (269)
T ss_dssp CBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTC
T ss_pred CcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccccCccc
Confidence 999999999999999999999998654321111223455
Q ss_pred cccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcc--------------------h--HHHHhhcccCCCC
Q 046589 664 AISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTGPKFE--------------------D--KDIVVGCVSDNPI 720 (729)
Q Consensus 664 ~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~--------------------~--~~l~~~c~~~~p~ 720 (729)
+..|+|||......++.++||||+||++|||+| |+.|+...-. + .+++..|++.+|+
T Consensus 170 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 249 (269)
T 4hcu_A 170 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPE 249 (269)
T ss_dssp CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGG
T ss_pred ccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcc
Confidence 678999998877889999999999999999999 8888763110 0 1799999999999
Q ss_pred CCCCccccC
Q 046589 721 AKPGMLRVQ 729 (729)
Q Consensus 721 ~Rp~~~~v~ 729 (729)
+|||+++++
T Consensus 250 ~Rps~~~ll 258 (269)
T 4hcu_A 250 DRPAFSRLL 258 (269)
T ss_dssp GSCCHHHHH
T ss_pred cCcCHHHHH
Confidence 999999863
No 146
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.79 E-value=1.2e-19 Score=191.67 Aligned_cols=105 Identities=20% Similarity=0.379 Sum_probs=84.7
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc-ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH-ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++........ ......++.+|+|||......++.++|||||||++||++| |+.|+.
T Consensus 140 Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 219 (325)
T 3kex_A 140 NLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYA 219 (325)
T ss_dssp CCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred ccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCcc
Confidence 99999999999999999999999886543222 2234567789999998887889999999999999999999 999986
Q ss_pred C-Ccc---------------------hHHHHhhcccCCCCCCCCccccC
Q 046589 703 P-KFE---------------------DKDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~-~~~---------------------~~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. ... -.+++.+||+.+|++|||+++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~ 268 (325)
T 3kex_A 220 GLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELA 268 (325)
T ss_dssp TSCTTHHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHH
T ss_pred ccCHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 3 111 00799999999999999999863
No 147
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.79 E-value=1.3e-19 Score=188.31 Aligned_cols=104 Identities=22% Similarity=0.352 Sum_probs=84.2
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCC-CCchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARK-ANERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~-~~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++..... ........++.+|+|||...+.. ++.++||||+||++|||+||+.|+..
T Consensus 126 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~ 204 (292)
T 3o0g_A 126 DLKPQNLLINRNGELKLANFGLARAFGIP-VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 204 (292)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECCSC-CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCC
T ss_pred CCCHHHEEEcCCCCEEEeecccceecCCc-cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcC
Confidence 99999999999999999999999876432 12233456788999999876544 79999999999999999999988531
Q ss_pred C---------------------cc----------------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 704 K---------------------FE----------------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~---------------------~~----------------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. |. + .+++..|++.+|++|||++|++
T Consensus 205 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 281 (292)
T 3o0g_A 205 GNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281 (292)
T ss_dssp CSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred CCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHh
Confidence 0 10 0 1799999999999999999873
No 148
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.78 E-value=1.3e-19 Score=193.24 Aligned_cols=100 Identities=25% Similarity=0.397 Sum_probs=84.0
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccC---CCCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGR---ARKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~---~~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++.++.+|++|||+++.... .....++.+|+|||... ...++.++|||||||++|||+||+.|+
T Consensus 179 Dlkp~NIll~~~~~~kL~DfG~a~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~ 253 (348)
T 1u5q_A 179 DVKAGNILLSEPGLVKLGDFGSASIMAP-----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253 (348)
T ss_dssp CCSGGGEEEETTTEEEECCCTTCBSSSS-----BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred CCCHHHEEECCCCCEEEeeccCceecCC-----CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999987543 12346789999999763 567899999999999999999999997
Q ss_pred CCC---------------------cchH--HHHhhcccCCCCCCCCccccC
Q 046589 702 GPK---------------------FEDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~---------------------~~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... |.+. +++..||+.+|++|||+++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll 304 (348)
T 1u5q_A 254 FNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL 304 (348)
T ss_dssp TTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred CCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHh
Confidence 521 1111 799999999999999999875
No 149
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.78 E-value=9.4e-20 Score=199.62 Aligned_cols=136 Identities=22% Similarity=0.329 Sum_probs=112.9
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
++|...+.||+|+||+||+|+.. +++.||||.
T Consensus 74 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~ 153 (437)
T 4aw2_A 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVM 153 (437)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEE
Confidence 57778889999999999999986 678899995
Q ss_pred ----------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcce
Q 046589 625 ----------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHIS 658 (729)
Q Consensus 625 ----------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~ 658 (729)
|+||+||+++.++.+||+|||+|+..........
T Consensus 154 Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~ 233 (437)
T 4aw2_A 154 DYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS 233 (437)
T ss_dssp CCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEEC
T ss_pred ecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCccc
Confidence 9999999999999999999999987654333333
Q ss_pred ecccccccccCccccC-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCc------------------------ch--
Q 046589 659 TDVASAISYVPPEYGR-----ARKANERDNIYRFGVVLLELVIRKQPTGPKF------------------------ED-- 707 (729)
Q Consensus 659 ~~~~~~~~y~ape~~~-----~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~------------------------~~-- 707 (729)
....||++|+|||+.. ...++.++||||+||++|||+||+.|+...- .+
T Consensus 234 ~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~ 313 (437)
T 4aw2_A 234 SVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENA 313 (437)
T ss_dssp CSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHH
T ss_pred ccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHH
Confidence 4467899999999875 4568999999999999999999999986310 01
Q ss_pred HHHHhhcccCCCCC--CCCcccc
Q 046589 708 KDIVVGCVSDNPIA--KPGMLRV 728 (729)
Q Consensus 708 ~~l~~~c~~~~p~~--Rp~~~~v 728 (729)
.+++.+|++.+|++ ||+++|+
T Consensus 314 ~dLi~~lL~~~~~r~~r~~~~ei 336 (437)
T 4aw2_A 314 KDLIRRLICSREHRLGQNGIEDF 336 (437)
T ss_dssp HHHHHTTSSCGGGCTTTTTTHHH
T ss_pred HHHHHHHhcccccccCCCCHHHH
Confidence 17899999888877 9999876
No 150
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.78 E-value=2.3e-19 Score=193.25 Aligned_cols=102 Identities=23% Similarity=0.349 Sum_probs=83.7
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCC---CCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA---RKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~---~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++.++.+||+|||+++..... .......+|.+|+|||.... ..++.++||||+||++|||+||+.|+
T Consensus 140 Dlkp~NIll~~~g~vkL~DFG~a~~~~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf 217 (384)
T 4fr4_A 140 DMKPDNILLDEHGHVHITDFNIAAMLPRE--TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217 (384)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECCTT--CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred cCcHHHeEECCCCCEEEeccceeeeccCC--CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCC
Confidence 99999999999999999999999876532 22345678999999998753 45889999999999999999999998
Q ss_pred CCC----------------------cchH--HHHhhcccCCCCCCCC-cccc
Q 046589 702 GPK----------------------FEDK--DIVVGCVSDNPIAKPG-MLRV 728 (729)
Q Consensus 702 ~~~----------------------~~~~--~l~~~c~~~~p~~Rp~-~~~v 728 (729)
... |.+. +++..|+..+|++||+ +++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l 269 (384)
T 4fr4_A 218 HIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDV 269 (384)
T ss_dssp CCCTTSCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHH
T ss_pred CCCCCccHHHHHHHHhhcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHH
Confidence 631 1111 7999999999999998 5543
No 151
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.78 E-value=8.5e-20 Score=189.38 Aligned_cols=104 Identities=21% Similarity=0.284 Sum_probs=81.1
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++...... .......++.+|+|||...+ ..++.++||||+||++|||+||+.|+..
T Consensus 125 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 203 (288)
T 1ob3_A 125 DLKPQNLLINREGELKIADFGLARAFGIPV-RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203 (288)
T ss_dssp CCCGGGEEECTTSCEEECCTTHHHHHCC----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCCHHHEEEcCCCCEEEeECccccccCccc-cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999998754211 12234467889999998754 4589999999999999999999998752
Q ss_pred C--------------------cc----------------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 704 K--------------------FE----------------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~--------------------~~----------------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. |. + .+++.+|++.+|++|||++|++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l 279 (288)
T 1ob3_A 204 VSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279 (288)
T ss_dssp SSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 0 10 0 1799999999999999999873
No 152
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.78 E-value=3.9e-20 Score=195.72 Aligned_cols=105 Identities=22% Similarity=0.335 Sum_probs=84.5
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc-ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH-ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++........ ......++..|+|||...+..++.++|||||||++|||+| |+.|+.
T Consensus 142 Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 221 (327)
T 3poz_A 142 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221 (327)
T ss_dssp CCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred CCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCcc
Confidence 99999999999999999999999876533222 1223455778999998888889999999999999999999 999976
Q ss_pred C-Ccc-------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 703 P-KFE-------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~-~~~-------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. ... . .+++.+||+.+|++||+|++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell 270 (327)
T 3poz_A 222 GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 270 (327)
T ss_dssp TCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHH
T ss_pred CCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence 3 110 0 1799999999999999999873
No 153
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=1.8e-18 Score=171.66 Aligned_cols=152 Identities=24% Similarity=0.262 Sum_probs=130.3
Q ss_pred EEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccC
Q 046589 109 YQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNS 188 (729)
Q Consensus 109 ~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~ 188 (729)
.++++++.++ .+|..+. ++|++|+|++|.++++.+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4677777776 4565544 689999999999998888889999999999999999998889999999999999999999
Q ss_pred CCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccc
Q 046589 189 FTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSG 264 (729)
Q Consensus 189 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 264 (729)
++...+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|.++ .++...|..+++|++|++++|.+..
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ-TIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC-EECHHHHhCCCCCCEEEeCCCCcCC
Confidence 98666667888999999999999999888888999999999999999998 4555778889999999999998864
No 154
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.78 E-value=2e-19 Score=192.90 Aligned_cols=106 Identities=31% Similarity=0.418 Sum_probs=92.4
Q ss_pred cccccccCCCCCCcceEEEeec-CCCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTM-PDGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~-~~~~~~avk~----------------------------------------------- 624 (729)
+.|.....||.|+||.||+|+. .+++.||||.
T Consensus 35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv 114 (360)
T 3llt_A 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLI 114 (360)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEE
T ss_pred CEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEE
Confidence 5677788899999999999998 4788999995
Q ss_pred -----------------------------------------------cccccceEecC----------------------
Q 046589 625 -----------------------------------------------DIKASNILLNE---------------------- 635 (729)
Q Consensus 625 -----------------------------------------------dlk~~nill~~---------------------- 635 (729)
|+||+||+++.
T Consensus 115 ~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~ 194 (360)
T 3llt_A 115 FEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIY 194 (360)
T ss_dssp ECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEE
T ss_pred EcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccccccccccc
Confidence 99999999975
Q ss_pred ---CccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 636 ---DFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 636 ---~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
++.+||+|||+++..... .....++..|+|||......++.++||||+||++|||+||+.|+.
T Consensus 195 ~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 260 (360)
T 3llt_A 195 RTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260 (360)
T ss_dssp EESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred ccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCC
Confidence 789999999999875431 224567889999999888889999999999999999999999985
No 155
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.78 E-value=7.9e-20 Score=193.12 Aligned_cols=105 Identities=24% Similarity=0.441 Sum_probs=82.8
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcce--ecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~--~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~ 701 (729)
|+||+||+++.++.+||+|||+++.......... ....++..|+|||......++.++|||||||++|||++ |+.|+
T Consensus 176 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~ 255 (325)
T 3kul_A 176 DLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255 (325)
T ss_dssp CCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred CCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCc
Confidence 9999999999999999999999987653222211 23345678999998877788999999999999999999 99987
Q ss_pred CCC--------------------cchH--HHHhhcccCCCCCCCCccccC
Q 046589 702 GPK--------------------FEDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~--------------------~~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... +.+. +++..||..+|++|||+++|+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil 305 (325)
T 3kul_A 256 WNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIV 305 (325)
T ss_dssp TTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred ccCCHHHHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 521 0111 799999999999999999874
No 156
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.78 E-value=9.4e-20 Score=192.34 Aligned_cols=137 Identities=25% Similarity=0.420 Sum_probs=112.4
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
++|.....||+|+||+||+|+.. +++.||||.
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 45667788999999999999875 888999985
Q ss_pred -------------------------------------------cccccceEecCCccEEEeecCCccccCCCCC-cceec
Q 046589 625 -------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKS-HISTD 660 (729)
Q Consensus 625 -------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~-~~~~~ 660 (729)
|+||+||+++.++.+||+|||+++....... .....
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 166 (323)
T 3tki_A 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166 (323)
T ss_dssp CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCS
T ss_pred CCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCC
Confidence 9999999999999999999999986542211 12234
Q ss_pred ccccccccCccccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCC-------------------cc---h--HHHHhhcc
Q 046589 661 VASAISYVPPEYGRARKA-NERDNIYRFGVVLLELVIRKQPTGPK-------------------FE---D--KDIVVGCV 715 (729)
Q Consensus 661 ~~~~~~y~ape~~~~~~~-~~~~Dv~s~G~vl~el~tg~~p~~~~-------------------~~---~--~~l~~~c~ 715 (729)
..++.+|+|||......+ +.++||||+||++|||+||+.|+... |. . .+++.+|+
T Consensus 167 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 246 (323)
T 3tki_A 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 246 (323)
T ss_dssp CCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHS
T ss_pred CccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHc
Confidence 578899999998766554 77899999999999999999998631 00 0 17999999
Q ss_pred cCCCCCCCCccccC
Q 046589 716 SDNPIAKPGMLRVQ 729 (729)
Q Consensus 716 ~~~p~~Rp~~~~v~ 729 (729)
+.+|++|||++|++
T Consensus 247 ~~dP~~R~t~~eil 260 (323)
T 3tki_A 247 VENPSARITIPDIK 260 (323)
T ss_dssp CSSTTTSCCHHHHT
T ss_pred cCChhhCcCHHHHh
Confidence 99999999999874
No 157
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.78 E-value=6.8e-20 Score=197.38 Aligned_cols=105 Identities=25% Similarity=0.434 Sum_probs=74.2
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcce--ecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~--~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~ 701 (729)
|+||+||+++.++.+|++|||+++.......... ....++.+|+|||......++.++|||||||++||+++ |+.|+
T Consensus 172 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~ 251 (373)
T 2qol_A 172 DLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251 (373)
T ss_dssp CCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTT
T ss_pred CCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999987653222111 12234568999998887889999999999999999998 99997
Q ss_pred CCC--------------------cchH--HHHhhcccCCCCCCCCccccC
Q 046589 702 GPK--------------------FEDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~--------------------~~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... +... +++..||+.+|++||+|++|+
T Consensus 252 ~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~ 301 (373)
T 2qol_A 252 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301 (373)
T ss_dssp TTCCHHHHHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHH
Confidence 521 0011 799999999999999999873
No 158
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.78 E-value=1.5e-19 Score=194.42 Aligned_cols=105 Identities=25% Similarity=0.408 Sum_probs=85.2
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc-ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH-ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+||+++.++.+||+|||+++........ ......++..|+|||......++.++|||||||++|||+| |+.|+.
T Consensus 228 Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~ 307 (370)
T 2psq_A 228 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 307 (370)
T ss_dssp CCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 99999999999999999999999875432211 1223455678999998888889999999999999999999 888875
Q ss_pred C-Ccc-------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 703 P-KFE-------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~-~~~-------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. ... . .+++..||+.+|++|||++|++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell 356 (370)
T 2psq_A 308 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 356 (370)
T ss_dssp TCCGGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 3 111 0 1799999999999999999874
No 159
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.78 E-value=7.3e-20 Score=189.24 Aligned_cols=137 Identities=28% Similarity=0.398 Sum_probs=109.4
Q ss_pred cccccccCCCCCCcceEEEeecCCCCceeeec------------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMPDGKTVAVKK------------------------------------------------ 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~~~~~~avk~------------------------------------------------ 624 (729)
+.+.....||.|+||.||+|...++..||||.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 103 (283)
T 3gen_A 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN 103 (283)
T ss_dssp GGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTT
T ss_pred HHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCC
Confidence 46667778999999999999999888999996
Q ss_pred -----------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceecccc
Q 046589 625 -----------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS 663 (729)
Q Consensus 625 -----------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~ 663 (729)
|+||+||+++.++.+|++|||+++..............+
T Consensus 104 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 183 (283)
T 3gen_A 104 GCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF 183 (283)
T ss_dssp CBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTS
T ss_pred CcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccccccccCCcc
Confidence 999999999999999999999998654321111123345
Q ss_pred cccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCc--------------------chH--HHHhhcccCCCC
Q 046589 664 AISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTGPKF--------------------EDK--DIVVGCVSDNPI 720 (729)
Q Consensus 664 ~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~--------------------~~~--~l~~~c~~~~p~ 720 (729)
+..|+|||......++.++||||+||++|||+| |+.|+...- .+. +++..|++.+|+
T Consensus 184 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 263 (283)
T 3gen_A 184 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKAD 263 (283)
T ss_dssp CGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGG
T ss_pred CcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHHHHHHccCChh
Confidence 678999998877788999999999999999999 988876210 011 799999999999
Q ss_pred CCCCccccC
Q 046589 721 AKPGMLRVQ 729 (729)
Q Consensus 721 ~Rp~~~~v~ 729 (729)
+|||+++++
T Consensus 264 ~Rps~~~ll 272 (283)
T 3gen_A 264 ERPTFKILL 272 (283)
T ss_dssp GSCCHHHHH
T ss_pred HCcCHHHHH
Confidence 999999873
No 160
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.78 E-value=3.4e-19 Score=191.44 Aligned_cols=101 Identities=20% Similarity=0.342 Sum_probs=84.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++++|++|||+++...... .......+|..|+|||......++.++||||+||++|||++|+.|+...
T Consensus 164 Dlkp~NIll~~~g~ikL~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 242 (373)
T 2r5t_A 164 DLKPENILLDSQGHIVLTDFGLCKENIEHN-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 242 (373)
T ss_dssp CCCGGGEEECTTSCEEECCCCBCGGGBCCC-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred CCCHHHEEECCCCCEEEeeCccccccccCC-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 999999999999999999999998643211 2233567899999999988888999999999999999999999998631
Q ss_pred cc-------------------h--HHHHhhcccCCCCCCCCcc
Q 046589 705 FE-------------------D--KDIVVGCVSDNPIAKPGML 726 (729)
Q Consensus 705 ~~-------------------~--~~l~~~c~~~~p~~Rp~~~ 726 (729)
-. . .+++..|++.+|++||++.
T Consensus 243 ~~~~~~~~i~~~~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 243 NTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp BHHHHHHHHHHSCCCCCSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence 11 1 1799999999999999985
No 161
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.78 E-value=1.2e-19 Score=197.16 Aligned_cols=136 Identities=21% Similarity=0.343 Sum_probs=112.9
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
++|.....||+|+||+||+|+.. +++.||||.
T Consensus 69 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 148 (410)
T 3v8s_A 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 148 (410)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 56777888999999999999985 688999995
Q ss_pred --------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceec
Q 046589 625 --------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTD 660 (729)
Q Consensus 625 --------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~ 660 (729)
|+||+||+++.++++||+|||+|+............
T Consensus 149 E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~ 228 (410)
T 3v8s_A 149 EYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 228 (410)
T ss_dssp CCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCS
T ss_pred eCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccC
Confidence 999999999999999999999998765432222335
Q ss_pred ccccccccCccccCCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCc-----------------c------h--HHHH
Q 046589 661 VASAISYVPPEYGRARK----ANERDNIYRFGVVLLELVIRKQPTGPKF-----------------E------D--KDIV 711 (729)
Q Consensus 661 ~~~~~~y~ape~~~~~~----~~~~~Dv~s~G~vl~el~tg~~p~~~~~-----------------~------~--~~l~ 711 (729)
..||+.|+|||...... ++.++||||+||++|||+||+.|+...- . + .+++
T Consensus 229 ~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li 308 (410)
T 3v8s_A 229 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLI 308 (410)
T ss_dssp CCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHH
T ss_pred CcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHHH
Confidence 67899999999876543 7889999999999999999999986310 0 1 1799
Q ss_pred hhcccCCCCC--CCCcccc
Q 046589 712 VGCVSDNPIA--KPGMLRV 728 (729)
Q Consensus 712 ~~c~~~~p~~--Rp~~~~v 728 (729)
.+|+..+|.+ ||+++||
T Consensus 309 ~~lL~~~~~rlgR~~~~ei 327 (410)
T 3v8s_A 309 CAFLTDREVRLGRNGVEEI 327 (410)
T ss_dssp HHHSSCGGGCTTSSCHHHH
T ss_pred HHHccChhhhCCCCCHHHH
Confidence 9999999988 9999886
No 162
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.78 E-value=1.6e-19 Score=190.62 Aligned_cols=104 Identities=19% Similarity=0.274 Sum_probs=80.4
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++..... ........++.+|+|||...+ ..++.++||||+||++|||+||+.|+..
T Consensus 125 Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 203 (324)
T 3mtl_A 125 DLKPQNLLINERGELKLADFGLARAKSIP-TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPG 203 (324)
T ss_dssp SCCGGGEEECTTCCEEECSSSEEECC-------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CcCHHHEEECCCCCEEEccCcccccccCC-ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999765422 122234567889999997765 5689999999999999999999999852
Q ss_pred C--------------------cc-----------------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 704 K--------------------FE-----------------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~--------------------~~-----------------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. |. + .+++..|++.+|++|||++|++
T Consensus 204 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 280 (324)
T 3mtl_A 204 STVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAM 280 (324)
T ss_dssp SSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred CCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHh
Confidence 1 10 0 1799999999999999999875
No 163
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.78 E-value=3.9e-19 Score=185.32 Aligned_cols=104 Identities=23% Similarity=0.432 Sum_probs=85.1
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCC---CCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARK---ANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~---~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++.++.+|++|||+++...... .......++..|+|||...... ++.++||||+||++|||++|+.|+
T Consensus 162 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf 240 (298)
T 2zv2_A 162 DIKPSNLLVGEDGHIKIADFGVSNEFKGSD-ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240 (298)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEECSSSS-CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSS
T ss_pred CCCHHHEEECCCCCEEEecCCCcccccccc-ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCC
Confidence 999999999999999999999998765322 2233457889999999876544 377899999999999999999997
Q ss_pred CCC---------------c------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 702 GPK---------------F------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~---------------~------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... + .+ .+++.+|++.+|++|||++|++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l 291 (298)
T 2zv2_A 241 MDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIK 291 (298)
T ss_dssp CCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHT
T ss_pred CCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHh
Confidence 631 0 01 1799999999999999999874
No 164
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.78 E-value=1.8e-19 Score=188.82 Aligned_cols=103 Identities=24% Similarity=0.335 Sum_probs=86.4
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++.+|++|||+++..... .......+|.+|+|||......++.++||||+||++|||+||+.|+...
T Consensus 145 Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 222 (308)
T 3g33_A 145 DLKPENILVTSGGTVKLADFGLARIYSYQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 222 (308)
T ss_dssp CCCTTTEEECTTSCEEECSCSCTTTSTTC--CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCS
T ss_pred CCCHHHEEEcCCCCEEEeeCccccccCCC--cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999875432 2223457789999999888888999999999999999999999998521
Q ss_pred --------------------cc--------------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 705 --------------------FE--------------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 705 --------------------~~--------------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|. + .+++..|++.+|++|||++|++
T Consensus 223 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 295 (308)
T 3g33_A 223 SEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 295 (308)
T ss_dssp SHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHh
Confidence 10 0 1699999999999999999863
No 165
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.78 E-value=1.5e-19 Score=188.09 Aligned_cols=104 Identities=23% Similarity=0.506 Sum_probs=79.9
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++.+|++|||+++..............++..|+|||......++.++||||+||++|||+||+.|+...
T Consensus 136 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~ 215 (294)
T 4eqm_A 136 DIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE 215 (294)
T ss_dssp CCCGGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred CCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999876532222233456889999999888888899999999999999999999998631
Q ss_pred cc------------------------h--HHHHhhcccCCCCCCC-Ccccc
Q 046589 705 FE------------------------D--KDIVVGCVSDNPIAKP-GMLRV 728 (729)
Q Consensus 705 ~~------------------------~--~~l~~~c~~~~p~~Rp-~~~~v 728 (729)
-. + .+++.+|++.+|++|| +++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l 266 (294)
T 4eqm_A 216 TAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEM 266 (294)
T ss_dssp CHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHH
T ss_pred ChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHH
Confidence 10 0 1799999999999999 66553
No 166
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.78 E-value=2.4e-19 Score=189.40 Aligned_cols=104 Identities=24% Similarity=0.442 Sum_probs=68.8
Q ss_pred cccccceEecCCc---cEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNEDF---DAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~---~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++.++ .+|++|||+++...... .......++.+|+|||......++.++||||+||++|||+||+.|+
T Consensus 131 Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf 209 (325)
T 3kn6_A 131 DLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPF 209 (325)
T ss_dssp CCCGGGEEEEC----CEEEECCCTTCEECCC-----------------------CCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred CCCHHHEEEecCCCcccEEEeccccceecCCCC-CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCC
Confidence 9999999998655 89999999998754322 2223456789999999988888999999999999999999999998
Q ss_pred CCCc----------------------c--------h--HHHHhhcccCCCCCCCCccccC
Q 046589 702 GPKF----------------------E--------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~~----------------------~--------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.... . + .+++..|+..+|++|||+++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell 269 (325)
T 3kn6_A 210 QSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLR 269 (325)
T ss_dssp C-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTST
T ss_pred CCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHh
Confidence 6310 0 0 0799999999999999999985
No 167
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.78 E-value=1.4e-19 Score=188.34 Aligned_cols=137 Identities=26% Similarity=0.407 Sum_probs=113.9
Q ss_pred cccccccCCCCCCcceEEEeec-CCCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTM-PDGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~-~~~~~~avk~----------------------------------------------- 624 (729)
+.|.....+|+|+||.||+|+. .+|+.||||.
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~ 88 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG 88 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECCC
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEecC
Confidence 5677778899999999999997 5888999995
Q ss_pred -----------------------------------------cccccceEe---cCCccEEEeecCCccccCCCCCc----
Q 046589 625 -----------------------------------------DIKASNILL---NEDFDAKVLDFGLARLISDCKSH---- 656 (729)
Q Consensus 625 -----------------------------------------dlk~~nill---~~~~~~kl~dfgl~~~~~~~~~~---- 656 (729)
|+||+||++ +.++.+|++|||+++........
T Consensus 89 ~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 168 (296)
T 3uzp_A 89 PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIP 168 (296)
T ss_dssp CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCC
T ss_pred CCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccc
Confidence 999999999 47889999999999876533221
Q ss_pred --ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC-Cc--------------------------ch
Q 046589 657 --ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGP-KF--------------------------ED 707 (729)
Q Consensus 657 --~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~-~~--------------------------~~ 707 (729)
......++..|+|||...+..++.++|||||||++|||+||+.|+.. .. .+
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (296)
T 3uzp_A 169 YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPS 248 (296)
T ss_dssp CCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCH
T ss_pred cccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCH
Confidence 12345788999999998888899999999999999999999999863 10 00
Q ss_pred H--HHHhhcccCCCCCCCCccccC
Q 046589 708 K--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 708 ~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. +++..||+.+|++|||+++|+
T Consensus 249 ~l~~li~~~l~~dp~~Rps~~~l~ 272 (296)
T 3uzp_A 249 EFATYLNFCRSLRFDDKPDYSYLR 272 (296)
T ss_dssp HHHHHHHHHHTSCTTCCCCHHHHH
T ss_pred HHHHHHHHHHhcCcCcCCCHHHHH
Confidence 1 799999999999999999863
No 168
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.78 E-value=1.6e-18 Score=195.20 Aligned_cols=133 Identities=28% Similarity=0.377 Sum_probs=60.9
Q ss_pred CCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEcc
Q 046589 130 KLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFS 209 (729)
Q Consensus 130 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 209 (729)
+|++|+|++|.+++++ ..+ .++|++|+|++|+|+ .+| ..+++|++|+|++|++++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~lp-~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLP-DNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSCCC-SCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCccC-HhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 4455555555554422 222 134555555555554 344 234455555555555543 343 333 55555555
Q ss_pred CCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeeccccccc
Q 046589 210 GNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQF 286 (729)
Q Consensus 210 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l 286 (729)
+|.+++ +|. .+++|++|++++|.+++ +|. .+++|++|+|++|.+++ +|. +. ++|+.|++++|.+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~----~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L 192 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE----LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLL 192 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC----cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCC
Confidence 555543 333 34455555555555542 332 34455555555555543 333 32 3444444444433
No 169
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.78 E-value=4.7e-20 Score=199.07 Aligned_cols=137 Identities=26% Similarity=0.410 Sum_probs=110.3
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
+++...+.||+|+||.||+|... +++.||||.
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 193 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL 193 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence 45666778999999999999986 788999995
Q ss_pred --------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcce-e
Q 046589 625 --------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHIS-T 659 (729)
Q Consensus 625 --------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~-~ 659 (729)
|+||+||+++.++.+||+|||+++.......... .
T Consensus 194 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~ 273 (377)
T 3cbl_A 194 VQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGG 273 (377)
T ss_dssp CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSS
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCC
Confidence 9999999999999999999999986442111111 1
Q ss_pred cccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC--------------------cchH--HHHhhccc
Q 046589 660 DVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTGPK--------------------FEDK--DIVVGCVS 716 (729)
Q Consensus 660 ~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~--------------------~~~~--~l~~~c~~ 716 (729)
...++..|+|||......++.++|||||||++||++| |+.|+... ..+. +++..||+
T Consensus 274 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 353 (377)
T 3cbl_A 274 LRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWA 353 (377)
T ss_dssp CCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred CCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcC
Confidence 1234668999998877788999999999999999999 88887521 0011 79999999
Q ss_pred CCCCCCCCccccC
Q 046589 717 DNPIAKPGMLRVQ 729 (729)
Q Consensus 717 ~~p~~Rp~~~~v~ 729 (729)
.+|++||||++|+
T Consensus 354 ~dP~~Rps~~~i~ 366 (377)
T 3cbl_A 354 YEPGQRPSFSTIY 366 (377)
T ss_dssp SSGGGSCCHHHHH
T ss_pred CCchhCcCHHHHH
Confidence 9999999999873
No 170
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.78 E-value=8.3e-20 Score=201.93 Aligned_cols=137 Identities=30% Similarity=0.512 Sum_probs=107.5
Q ss_pred cccccccCCCCCCcceEEEeecCCCCceeeec------------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMPDGKTVAVKK------------------------------------------------ 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~~~~~~avk~------------------------------------------------ 624 (729)
+.+.....||+|+||.||+|.+.++..||||.
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~~~g 263 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKG 263 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTC
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhhcCC
Confidence 45566677999999999999998888899996
Q ss_pred -----------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceecccc
Q 046589 625 -----------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS 663 (729)
Q Consensus 625 -----------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~ 663 (729)
|+||+||+++.++.+||+|||+++..............+
T Consensus 264 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~ 343 (452)
T 1fmk_A 264 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 343 (452)
T ss_dssp BHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------C
T ss_pred CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcc
Confidence 999999999999999999999998765322222233456
Q ss_pred cccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCc--------------------ch--HHHHhhcccCCCC
Q 046589 664 AISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTGPKF--------------------ED--KDIVVGCVSDNPI 720 (729)
Q Consensus 664 ~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~--------------------~~--~~l~~~c~~~~p~ 720 (729)
+..|+|||......++.++|||||||++|||+| |+.|+...- .+ .+++..||+.+|+
T Consensus 344 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 423 (452)
T 1fmk_A 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPE 423 (452)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGG
T ss_pred cccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChh
Confidence 778999998877889999999999999999999 888875210 01 1799999999999
Q ss_pred CCCCccccC
Q 046589 721 AKPGMLRVQ 729 (729)
Q Consensus 721 ~Rp~~~~v~ 729 (729)
+|||+++++
T Consensus 424 ~Rpt~~~l~ 432 (452)
T 1fmk_A 424 ERPTFEYLQ 432 (452)
T ss_dssp GSCCHHHHH
T ss_pred hCcCHHHHH
Confidence 999999863
No 171
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.78 E-value=1.7e-19 Score=188.98 Aligned_cols=105 Identities=28% Similarity=0.461 Sum_probs=81.7
Q ss_pred cccccceEecCCccEEEeecCCccccCCCC-CcceecccccccccCccccC---CCCCCchhhHHHHHHHHHHHHhCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCK-SHISTDVASAISYVPPEYGR---ARKANERDNIYRFGVVLLELVIRKQP 700 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~-~~~~~~~~~~~~y~ape~~~---~~~~~~~~Dv~s~G~vl~el~tg~~p 700 (729)
|+||+||+++.++.+|++|||+++...... ........++.+|+|||... ...++.++|||||||++|||+||+.|
T Consensus 157 Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~P 236 (307)
T 3lb7_A 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236 (307)
T ss_dssp CCCSSSEEECTTSCEEECCCCSSCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred CCChhhEEEcCCCCEEEccCCCceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999998654211 12223457889999999764 56788999999999999999999999
Q ss_pred CCCCc-------------------------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 701 TGPKF-------------------------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 701 ~~~~~-------------------------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+...- .+ .+++..|++.+|++||++++|+
T Consensus 237 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il 292 (307)
T 3lb7_A 237 YSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQIL 292 (307)
T ss_dssp TTTCCCHHHHHHHHHHTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHH
T ss_pred CccCCcHHHHHHHHhcCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHH
Confidence 86210 00 1799999999999999999873
No 172
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.78 E-value=1.7e-19 Score=198.01 Aligned_cols=74 Identities=24% Similarity=0.284 Sum_probs=64.2
Q ss_pred cccccceEecCCcc--EEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLNEDFD--AKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~--~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++.++. +||+|||+++..... .....+|.+|+|||......++.++|||||||++|||+||+.|+.
T Consensus 225 DlKp~NILl~~~~~~~vkL~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~ 300 (429)
T 3kvw_A 225 DLKPENILLKQQGRSGIKVIDFGSSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP 300 (429)
T ss_dssp CCSGGGEEESSTTSCCEEECCCTTCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCCHHHeEEccCCCcceEEeecccceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCC
Confidence 99999999998876 999999999764421 224567889999999888889999999999999999999998875
No 173
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.78 E-value=2.2e-19 Score=189.73 Aligned_cols=103 Identities=23% Similarity=0.323 Sum_probs=85.8
Q ss_pred cccccceEecCCc----cEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 046589 625 DIKASNILLNEDF----DAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQP 700 (729)
Q Consensus 625 dlk~~nill~~~~----~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p 700 (729)
|+||+||+++.++ .+|++|||+++...... ......++..|+|||......++.++||||+||++|||+||+.|
T Consensus 139 Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p 216 (326)
T 2y0a_A 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216 (326)
T ss_dssp CCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCS
T ss_pred CCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCC
Confidence 9999999999877 89999999998764321 22345688999999998888899999999999999999999999
Q ss_pred CCCCc---------------ch----------HHHHhhcccCCCCCCCCccccC
Q 046589 701 TGPKF---------------ED----------KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 701 ~~~~~---------------~~----------~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+.... .. .+++..|+..+|++|||+++++
T Consensus 217 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l 270 (326)
T 2y0a_A 217 FLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270 (326)
T ss_dssp SCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred CCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 86311 00 1799999999999999999873
No 174
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.78 E-value=1.8e-19 Score=191.09 Aligned_cols=103 Identities=26% Similarity=0.435 Sum_probs=85.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKA-NERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~-~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++...... ......++.+|+|||......+ +.++||||+||++|||++|+.|+..
T Consensus 155 Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 232 (335)
T 3dls_A 155 DIKDENIVIAEDFTIKLIDFGSAAYLERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232 (335)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred ccCHHHEEEcCCCcEEEeecccceECCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence 999999999999999999999998765322 2234568899999998877665 7889999999999999999999862
Q ss_pred C-------------cchH--HHHhhcccCCCCCCCCccccC
Q 046589 704 K-------------FEDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~-------------~~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. +.+. +++..|++.+|++|||+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell 273 (335)
T 3dls_A 233 LEETVEAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLV 273 (335)
T ss_dssp GGGGTTTCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHhhccCCCcccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 0 1111 899999999999999999874
No 175
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.78 E-value=3.7e-19 Score=187.30 Aligned_cols=104 Identities=23% Similarity=0.307 Sum_probs=84.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++...... .......++.+|+|||...+ ..++.++||||+||++|||+||+.|+..
T Consensus 133 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 211 (317)
T 2pmi_A 133 DLKPQNLLINKRGQLKLGDFGLARAFGIPV-NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPG 211 (317)
T ss_dssp CCCGGGEEECTTCCEEECCCSSCEETTSCC-CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCChHHeEEcCCCCEEECcCccceecCCCc-ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999998754321 12234567889999998765 4679999999999999999999999752
Q ss_pred C--------------------c---------------------------------ch--HHHHhhcccCCCCCCCCcccc
Q 046589 704 K--------------------F---------------------------------ED--KDIVVGCVSDNPIAKPGMLRV 728 (729)
Q Consensus 704 ~--------------------~---------------------------------~~--~~l~~~c~~~~p~~Rp~~~~v 728 (729)
. | .. .+++..|++.+|++|||++|+
T Consensus 212 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~ 291 (317)
T 2pmi_A 212 TNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQA 291 (317)
T ss_dssp SSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred CChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHH
Confidence 1 0 00 178999999999999999987
Q ss_pred C
Q 046589 729 Q 729 (729)
Q Consensus 729 ~ 729 (729)
+
T Consensus 292 l 292 (317)
T 2pmi_A 292 L 292 (317)
T ss_dssp T
T ss_pred h
Confidence 5
No 176
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.78 E-value=2.1e-19 Score=199.09 Aligned_cols=77 Identities=31% Similarity=0.392 Sum_probs=62.0
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.+||+|||+|+..... ...+...+|.+|+|||...+..++.++||||+||++|||++|+.||..
T Consensus 189 Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g 265 (464)
T 3ttj_A 189 DLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 265 (464)
T ss_dssp CCCGGGEEECTTSCEEECCCCCC-----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCChHhEEEeCCCCEEEEEEEeeeecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999876432 223456789999999998888899999999999999999999999863
No 177
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.78 E-value=2.7e-19 Score=189.51 Aligned_cols=136 Identities=20% Similarity=0.271 Sum_probs=112.6
Q ss_pred cccccccCCCCCCcceEEEeec-CCCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTM-PDGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~-~~~~~~avk~----------------------------------------------- 624 (729)
++|.....||.|+||.||+|+. .+|+.||||.
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLG 88 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECCC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeCC
Confidence 4677778899999999999996 5888999995
Q ss_pred -----------------------------------------cccccceEecCCcc-----EEEeecCCccccCCCCCc--
Q 046589 625 -----------------------------------------DIKASNILLNEDFD-----AKVLDFGLARLISDCKSH-- 656 (729)
Q Consensus 625 -----------------------------------------dlk~~nill~~~~~-----~kl~dfgl~~~~~~~~~~-- 656 (729)
|+||+||+++.++. +|++|||+++........
T Consensus 89 ~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~ 168 (330)
T 2izr_A 89 PSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKH 168 (330)
T ss_dssp CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCB
T ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCcc
Confidence 99999999998887 999999999875432211
Q ss_pred ----ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC-Ccc-------------------------
Q 046589 657 ----ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGP-KFE------------------------- 706 (729)
Q Consensus 657 ----~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~-~~~------------------------- 706 (729)
......+|..|+|||...+..++.++|||||||++|||+||+.|+.. ...
T Consensus 169 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 248 (330)
T 2izr_A 169 IPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENF 248 (330)
T ss_dssp CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTC
T ss_pred ccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccC
Confidence 11345788999999998888899999999999999999999999863 100
Q ss_pred --hHHHHhhcccCCCCCCCCcccc
Q 046589 707 --DKDIVVGCVSDNPIAKPGMLRV 728 (729)
Q Consensus 707 --~~~l~~~c~~~~p~~Rp~~~~v 728 (729)
-.+++..||+.+|.+||++++|
T Consensus 249 p~~~~li~~~l~~~p~~RP~~~~l 272 (330)
T 2izr_A 249 PEMATYLRYVRRLDFFEKPDYDYL 272 (330)
T ss_dssp HHHHHHHHHHHHCCTTCCCCHHHH
T ss_pred hHHHHHHHHHHhCCCCCCCCHHHH
Confidence 0168899999999999999886
No 178
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.77 E-value=1.8e-19 Score=189.95 Aligned_cols=103 Identities=17% Similarity=0.260 Sum_probs=86.2
Q ss_pred cccccceEecC--CccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLNE--DFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~--~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++. ++.+|++|||+++..... .......++++|+|||......++.++||||+||++|||+||+.|+.
T Consensus 127 Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~ 204 (321)
T 1tki_A 127 DIRPENIIYQTRRSSTIKIIEFGQARQLKPG--DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFL 204 (321)
T ss_dssp CCCGGGEEESSSSCCCEEECCCTTCEECCTT--CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred CCCHHHEEEccCCCCCEEEEECCCCeECCCC--CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 99999999997 789999999999876532 22344578899999998877778999999999999999999999986
Q ss_pred CCc---------------ch----------HHHHhhcccCCCCCCCCccccC
Q 046589 703 PKF---------------ED----------KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~~---------------~~----------~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
..- .. .+++..|+..+|++|||++|++
T Consensus 205 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l 256 (321)
T 1tki_A 205 AETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEAL 256 (321)
T ss_dssp CSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred CCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence 311 10 1799999999999999999863
No 179
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.77 E-value=2.1e-19 Score=191.81 Aligned_cols=135 Identities=21% Similarity=0.341 Sum_probs=104.2
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
+.|.....||+|+||.||+|+.. +++.||||.
T Consensus 53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 132 (349)
T 2w4o_A 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG 132 (349)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCC
Confidence 45677788999999999999986 678899986
Q ss_pred ----------------------------------------cccccceEecC---CccEEEeecCCccccCCCCCcceecc
Q 046589 625 ----------------------------------------DIKASNILLNE---DFDAKVLDFGLARLISDCKSHISTDV 661 (729)
Q Consensus 625 ----------------------------------------dlk~~nill~~---~~~~kl~dfgl~~~~~~~~~~~~~~~ 661 (729)
|+||+||+++. ++.+|++|||+++..... ......
T Consensus 133 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~ 210 (349)
T 2w4o_A 133 GELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ--VLMKTV 210 (349)
T ss_dssp CBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------------
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc--cccccc
Confidence 99999999975 889999999999875431 122345
Q ss_pred cccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc---------------------c-----hHHHHhhcc
Q 046589 662 ASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPKF---------------------E-----DKDIVVGCV 715 (729)
Q Consensus 662 ~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~---------------------~-----~~~l~~~c~ 715 (729)
.++.+|+|||...+..++.++|||||||++|||+||+.|+...- . -.+++.+|+
T Consensus 211 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L 290 (349)
T 2w4o_A 211 CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLI 290 (349)
T ss_dssp --CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTS
T ss_pred cCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHc
Confidence 67899999999888889999999999999999999999985210 0 017999999
Q ss_pred cCCCCCCCCccccC
Q 046589 716 SDNPIAKPGMLRVQ 729 (729)
Q Consensus 716 ~~~p~~Rp~~~~v~ 729 (729)
+.+|++|||+++++
T Consensus 291 ~~dP~~Rpt~~e~l 304 (349)
T 2w4o_A 291 VLDPKKRLTTFQAL 304 (349)
T ss_dssp CSSGGGSCCHHHHH
T ss_pred cCChhhCcCHHHHh
Confidence 99999999998863
No 180
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.77 E-value=2.8e-19 Score=191.40 Aligned_cols=103 Identities=22% Similarity=0.338 Sum_probs=85.8
Q ss_pred cccccceEecCCc----cEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 046589 625 DIKASNILLNEDF----DAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQP 700 (729)
Q Consensus 625 dlk~~nill~~~~----~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p 700 (729)
|+||+||+++.++ .+|++|||+++..... .......+|++|+|||......++.++||||+||++|||++|+.|
T Consensus 140 Dlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~P 217 (361)
T 2yab_A 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG--VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217 (361)
T ss_dssp CCSGGGEEESCTTSSSCCEEECCCSSCEECCTT--CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCS
T ss_pred CCCHHHEEEeCCCCCccCEEEEecCCceEcCCC--CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCC
Confidence 9999999998776 7999999999876532 122345788999999998888899999999999999999999999
Q ss_pred CCCC---------------cch----------HHHHhhcccCCCCCCCCccccC
Q 046589 701 TGPK---------------FED----------KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 701 ~~~~---------------~~~----------~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+... +.. .+++..|+..+|++|||++|++
T Consensus 218 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l 271 (361)
T 2yab_A 218 FLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEAL 271 (361)
T ss_dssp SCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred CCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 8631 110 1799999999999999999863
No 181
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.77 E-value=1.1e-19 Score=198.57 Aligned_cols=100 Identities=10% Similarity=0.097 Sum_probs=83.2
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCcccc----------CCCCCCchhhHHHHHHHHHHH
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYG----------RARKANERDNIYRFGVVLLEL 694 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~----------~~~~~~~~~Dv~s~G~vl~el 694 (729)
|+||+||+++.++.+||+|||+++.... ......+ .+|+|||.. ....++.++|||||||++|||
T Consensus 236 DiKp~NILl~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~el 310 (413)
T 3dzo_A 236 YLRPVDIVLDQRGGVFLTGFEHLVRDGA----SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWI 310 (413)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTE----EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHH
T ss_pred CcccceEEEecCCeEEEEeccceeecCC----ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHH
Confidence 9999999999999999999999886432 1334455 899999987 556688999999999999999
Q ss_pred HhCCCCCCCCcc---------------hH--HHHhhcccCCCCCCCCccccC
Q 046589 695 VIRKQPTGPKFE---------------DK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 695 ~tg~~p~~~~~~---------------~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+||+.|+...-. +. +++..|+..+|++||++.+++
T Consensus 311 ltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 311 WCADLPNTDDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHSSCCCCTTGGGSCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHCCCCCCCcchhhhHHHHHhhcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 999999873111 11 899999999999999998764
No 182
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.77 E-value=2.6e-19 Score=196.74 Aligned_cols=104 Identities=23% Similarity=0.346 Sum_probs=86.3
Q ss_pred cccccceEec---CCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLN---EDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~---~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++ .++.+|++|||+++...... .......+|++|+|||......++.++||||+||++|||++|+.|+
T Consensus 135 DlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf 213 (444)
T 3soa_A 135 NLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213 (444)
T ss_dssp CCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred CCCHHHEEEeccCCCCcEEEccCceeEEecCCC-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCC
Confidence 9999999998 46789999999998765322 2234567899999999988888999999999999999999999997
Q ss_pred CC--------------------Ccc---h--HHHHhhcccCCCCCCCCccccC
Q 046589 702 GP--------------------KFE---D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~--------------------~~~---~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. .|. + .+++..|++.+|++|||++|++
T Consensus 214 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L 266 (444)
T 3soa_A 214 WDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEAL 266 (444)
T ss_dssp CCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred CCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 52 111 1 1899999999999999999863
No 183
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.77 E-value=2.2e-19 Score=191.59 Aligned_cols=100 Identities=22% Similarity=0.345 Sum_probs=83.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++++|++|||+++...... .......||..|+|||......++.++||||+||++|||++|+.|+...
T Consensus 146 Dlkp~NIll~~~g~vkL~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 224 (353)
T 2i0e_A 146 DLKLDNVMLDSEGHIKIADFGMCKENIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 224 (353)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCBCCCCTT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCCHHHEEEcCCCcEEEEeCCcccccccCC-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC
Confidence 999999999999999999999998643211 2233457899999999988888999999999999999999999998731
Q ss_pred cc-------------------h--HHHHhhcccCCCCCCCCc
Q 046589 705 FE-------------------D--KDIVVGCVSDNPIAKPGM 725 (729)
Q Consensus 705 ~~-------------------~--~~l~~~c~~~~p~~Rp~~ 725 (729)
-. . .+++..|+..+|++||++
T Consensus 225 ~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 225 DEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp SHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred CHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 11 1 179999999999999975
No 184
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.77 E-value=2.2e-19 Score=186.27 Aligned_cols=103 Identities=25% Similarity=0.437 Sum_probs=75.5
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCcccc----CCCCCCchhhHHHHHHHHHHHHhCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYG----RARKANERDNIYRFGVVLLELVIRKQP 700 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~----~~~~~~~~~Dv~s~G~vl~el~tg~~p 700 (729)
|+||+||+++.++.+|++|||+++...... ......++.+|+|||.. ....++.++||||+||++|||+||+.|
T Consensus 135 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 212 (290)
T 3fme_A 135 DVKPSNVLINALGQVKMCDFGISGYLVDDV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 212 (290)
T ss_dssp CCSGGGCEECTTCCEEBCCC-----------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCS
T ss_pred CCCHHHEEECCCCCEEEeecCCcccccccc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 999999999999999999999998754321 12234678899999984 456789999999999999999999999
Q ss_pred CCCC----------------------cchH--HHHhhcccCCCCCCCCccccC
Q 046589 701 TGPK----------------------FEDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 701 ~~~~----------------------~~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+... +.+. +++..|++.+|++|||++|++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l 265 (290)
T 3fme_A 213 YDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 265 (290)
T ss_dssp SCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred ccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHH
Confidence 8631 0011 799999999999999999875
No 185
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.77 E-value=2.5e-19 Score=194.83 Aligned_cols=135 Identities=23% Similarity=0.290 Sum_probs=111.5
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
++|.....||+|+||+||+|+.. +|+.||||.
T Consensus 61 ~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVm 140 (412)
T 2vd5_A 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVM 140 (412)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred hhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 57778888999999999999985 789999995
Q ss_pred ----------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcce
Q 046589 625 ----------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHIS 658 (729)
Q Consensus 625 ----------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~ 658 (729)
|+||+||+++.++++|++|||+++..........
T Consensus 141 E~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~ 220 (412)
T 2vd5_A 141 EYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRS 220 (412)
T ss_dssp CCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEEC
T ss_pred cCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCcccc
Confidence 9999999999999999999999987654332222
Q ss_pred ecccccccccCccccC-------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-----------------c-------h
Q 046589 659 TDVASAISYVPPEYGR-------ARKANERDNIYRFGVVLLELVIRKQPTGPKF-----------------E-------D 707 (729)
Q Consensus 659 ~~~~~~~~y~ape~~~-------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~-----------------~-------~ 707 (729)
....||..|+|||... ...++.++||||+||++|||+||+.|+...- . +
T Consensus 221 ~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~ 300 (412)
T 2vd5_A 221 LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPE 300 (412)
T ss_dssp SSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCH
T ss_pred ceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCH
Confidence 3457899999999765 3568999999999999999999999986310 0 0
Q ss_pred --HHHHhhcccCCCCCC---CCcccc
Q 046589 708 --KDIVVGCVSDNPIAK---PGMLRV 728 (729)
Q Consensus 708 --~~l~~~c~~~~p~~R---p~~~~v 728 (729)
.+++.+|+. +|++| |+++|+
T Consensus 301 ~~~dli~~lL~-~p~~Rlgr~~~~ei 325 (412)
T 2vd5_A 301 EARDFIQRLLC-PPETRLGRGGAGDF 325 (412)
T ss_dssp HHHHHHHTTSS-CGGGCTTTTTHHHH
T ss_pred HHHHHHHHHcC-ChhhcCCCCCHHHH
Confidence 179999999 99988 577775
No 186
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.77 E-value=4.4e-19 Score=183.41 Aligned_cols=135 Identities=24% Similarity=0.358 Sum_probs=112.2
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
++|...+.+|.|+||.||+|... +|+.||||.
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 85 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 46677788999999999999875 788999995
Q ss_pred --------------------------------------------cccccceEecCCcc---EEEeecCCccccCCCCCcc
Q 046589 625 --------------------------------------------DIKASNILLNEDFD---AKVLDFGLARLISDCKSHI 657 (729)
Q Consensus 625 --------------------------------------------dlk~~nill~~~~~---~kl~dfgl~~~~~~~~~~~ 657 (729)
|+||+||+++.++. +|++|||++...... ..
T Consensus 86 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~--~~ 163 (284)
T 3kk8_A 86 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS--EA 163 (284)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS--CB
T ss_pred cCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC--cc
Confidence 99999999986554 999999999775532 22
Q ss_pred eecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------------------c---ch--HHHHh
Q 046589 658 STDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK--------------------F---ED--KDIVV 712 (729)
Q Consensus 658 ~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~--------------------~---~~--~~l~~ 712 (729)
.....++.+|+|||......++.++||||+||++|||++|+.|+... | .+ .+++.
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 243 (284)
T 3kk8_A 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 243 (284)
T ss_dssp CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHH
T ss_pred ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHH
Confidence 23457889999999988888999999999999999999999997521 0 01 17999
Q ss_pred hcccCCCCCCCCccccC
Q 046589 713 GCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 713 ~c~~~~p~~Rp~~~~v~ 729 (729)
.|++.+|++|||++|++
T Consensus 244 ~~l~~dp~~Rps~~~~l 260 (284)
T 3kk8_A 244 SMLTVNPKKRITADQAL 260 (284)
T ss_dssp HHSCSSTTTSCCHHHHT
T ss_pred HHcccChhhCCCHHHHh
Confidence 99999999999999875
No 187
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.77 E-value=4.9e-19 Score=204.76 Aligned_cols=132 Identities=23% Similarity=0.338 Sum_probs=112.5
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
++|.....||+|+||.||+|+.. +++.||||.
T Consensus 341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV 420 (674)
T 3pfq_A 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 420 (674)
T ss_dssp TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEE
T ss_pred cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEE
Confidence 46777788999999999999985 778899995
Q ss_pred ----------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcce
Q 046589 625 ----------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHIS 658 (729)
Q Consensus 625 ----------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~ 658 (729)
||||+||+++.++++||+|||+|+...... ...
T Consensus 421 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~-~~~ 499 (674)
T 3pfq_A 421 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG-VTT 499 (674)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT-CCB
T ss_pred EeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCC-ccc
Confidence 999999999999999999999998643222 223
Q ss_pred ecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcc-------------------h--HHHHhhcccC
Q 046589 659 TDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPKFE-------------------D--KDIVVGCVSD 717 (729)
Q Consensus 659 ~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~-------------------~--~~l~~~c~~~ 717 (729)
....||++|+|||......++.++|||||||++|||+||+.|+...-. . .+++..|+..
T Consensus 500 ~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~ 579 (674)
T 3pfq_A 500 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTK 579 (674)
T ss_dssp CCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCTTSCHHHHHHHHHHSCS
T ss_pred ccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHccC
Confidence 456789999999998888999999999999999999999999874211 1 1899999999
Q ss_pred CCCCCCCc
Q 046589 718 NPIAKPGM 725 (729)
Q Consensus 718 ~p~~Rp~~ 725 (729)
+|++||++
T Consensus 580 dP~~R~~~ 587 (674)
T 3pfq_A 580 HPGKRLGC 587 (674)
T ss_dssp SSTTCTTC
T ss_pred CHHHCCCC
Confidence 99999998
No 188
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.77 E-value=2.5e-19 Score=197.87 Aligned_cols=103 Identities=20% Similarity=0.327 Sum_probs=85.1
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++.+||+|||+|+...... .......+|.+|+|||......++.++||||+||++|||+||+.|+...
T Consensus 274 Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 352 (446)
T 4ejn_A 274 DLKLENLMLDKDGHIKITDFGLCKEGIKDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 352 (446)
T ss_dssp CCCGGGEEECSSSCEEECCCCCCCTTCC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCHHHEEECCCCCEEEccCCCceeccCCC-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC
Confidence 999999999999999999999998644322 2233567899999999988888999999999999999999999998631
Q ss_pred cc-------------------h--HHHHhhcccCCCCCCC-----Ccccc
Q 046589 705 FE-------------------D--KDIVVGCVSDNPIAKP-----GMLRV 728 (729)
Q Consensus 705 ~~-------------------~--~~l~~~c~~~~p~~Rp-----~~~~v 728 (729)
-. + .+++..|++.+|++|| +++|+
T Consensus 353 ~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~el 402 (446)
T 4ejn_A 353 DHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEI 402 (446)
T ss_dssp SHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHH
T ss_pred CHHHHHHHHHhCCCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHH
Confidence 11 1 1799999999999999 88776
No 189
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.77 E-value=4.2e-19 Score=188.04 Aligned_cols=136 Identities=25% Similarity=0.389 Sum_probs=107.8
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
+.|.....||+|+||.||+|+.. +|+.||||.
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 45667788999999999999985 688999995
Q ss_pred --------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceec
Q 046589 625 --------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTD 660 (729)
Q Consensus 625 --------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~ 660 (729)
|+||+||+++.++.+|++|||+++...... .....
T Consensus 105 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 183 (331)
T 4aaa_A 105 FVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-EVYDD 183 (331)
T ss_dssp CCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC-------------
T ss_pred cCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc-cccCC
Confidence 999999999999999999999997654321 22234
Q ss_pred ccccccccCccccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCc----------------------------------
Q 046589 661 VASAISYVPPEYGRAR-KANERDNIYRFGVVLLELVIRKQPTGPKF---------------------------------- 705 (729)
Q Consensus 661 ~~~~~~y~ape~~~~~-~~~~~~Dv~s~G~vl~el~tg~~p~~~~~---------------------------------- 705 (729)
..++.+|+|||...+. .++.++||||+||++|||+||+.|+...-
T Consensus 184 ~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (331)
T 4aaa_A 184 EVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRL 263 (331)
T ss_dssp CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCC
T ss_pred CcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccC
Confidence 5678899999987654 67899999999999999999999985310
Q ss_pred ----------------chH--HHHhhcccCCCCCCCCccccC
Q 046589 706 ----------------EDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 706 ----------------~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.+. +++.+|++.+|++|||++|++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell 305 (331)
T 4aaa_A 264 PEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL 305 (331)
T ss_dssp CCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGG
T ss_pred ccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHh
Confidence 011 789999999999999999985
No 190
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.77 E-value=5.4e-19 Score=185.92 Aligned_cols=100 Identities=24% Similarity=0.457 Sum_probs=84.5
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++.+|++|||+++.... ......+|..|+|||......++.++||||+||++|||++|+.|+...
T Consensus 131 Dlkp~NIll~~~g~~kL~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 206 (318)
T 1fot_A 131 DLKPENILLDKNGHIKITDFGFAKYVPD----VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS 206 (318)
T ss_dssp CCCGGGEEECTTSCEEECCCSSCEECSS----CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred CCChheEEEcCCCCEEEeecCcceecCC----ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999987542 123457889999999988888999999999999999999999998631
Q ss_pred cc-------------------h--HHHHhhcccCCCCCCC-----Ccccc
Q 046589 705 FE-------------------D--KDIVVGCVSDNPIAKP-----GMLRV 728 (729)
Q Consensus 705 ~~-------------------~--~~l~~~c~~~~p~~Rp-----~~~~v 728 (729)
-. + .+++.+|+..+|++|| +++++
T Consensus 207 ~~~~~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i 256 (318)
T 1fot_A 207 NTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDV 256 (318)
T ss_dssp SHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHH
T ss_pred CHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHH
Confidence 10 1 1799999999999999 66665
No 191
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.77 E-value=3.3e-19 Score=191.13 Aligned_cols=103 Identities=23% Similarity=0.358 Sum_probs=85.1
Q ss_pred cccccceEecCC---ccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNED---FDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~---~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++.+ +.+|++|||+++..... .......++.+|+|||......++.++||||+||++|||+||+.|+
T Consensus 153 Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf 230 (362)
T 2bdw_A 153 NLKPENLLLASKAKGAAVKLADFGLAIEVNDS--EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230 (362)
T ss_dssp CCSGGGEEESCSSTTCCEEECCCTTCBCCTTC--CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cCchHHEEEecCCCCCCEEEeecCcceEecCC--cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 999999999854 46999999999876532 2233457889999999988888999999999999999999999997
Q ss_pred CCC--------------------cc---h--HHHHhhcccCCCCCCCCccccC
Q 046589 702 GPK--------------------FE---D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~--------------------~~---~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... |. + .+++..|+..+|++|||+++++
T Consensus 231 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 283 (362)
T 2bdw_A 231 WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL 283 (362)
T ss_dssp CCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred CCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 521 11 1 1799999999999999999874
No 192
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=1.7e-18 Score=185.63 Aligned_cols=175 Identities=26% Similarity=0.224 Sum_probs=151.4
Q ss_pred EEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCccccc-CCCCCCEEeccCCcCcccCCccccCCCCCcEEEeecc
Q 046589 109 YQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVS-NLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSN 187 (729)
Q Consensus 109 ~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N 187 (729)
.++++++.++. +|..+. +.+++|+|++|++++..+..|. ++++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 57888888874 666544 4689999999999999888887 9999999999999999888888999999999999999
Q ss_pred CCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhh---ccCCCCCEEEcccccccc
Q 046589 188 SFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLF---TNLQSLSYLDVSNNLLSG 264 (729)
Q Consensus 188 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~---~~l~~L~~L~Ls~N~l~~ 264 (729)
++++..+..|.++++|++|+|++|+++...|..|..+++|++|+|++|.++ .++...| ..+++|++|+|++|+++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 999888888999999999999999999888899999999999999999998 5776666 679999999999999996
Q ss_pred cCCccccCCCc--CCeecccccccc
Q 046589 265 NIPPEISHLKK--LSDHYLGINQFT 287 (729)
Q Consensus 265 ~~p~~l~~l~~--L~~l~l~~n~l~ 287 (729)
..+..+..++. ++.+++++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 66567777776 377888888875
No 193
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.77 E-value=3.9e-19 Score=197.12 Aligned_cols=136 Identities=27% Similarity=0.395 Sum_probs=114.0
Q ss_pred cccccccCCCCCCcceEEEeec-CCCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTM-PDGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~-~~~~~~avk~----------------------------------------------- 624 (729)
+.|.....||.|+||.||+|+. .+++.||||.
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~g 86 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLLG 86 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECCC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECCC
Confidence 4677788899999999999996 5788999995
Q ss_pred -----------------------------------------cccccceEe---cCCccEEEeecCCccccCCCCCc----
Q 046589 625 -----------------------------------------DIKASNILL---NEDFDAKVLDFGLARLISDCKSH---- 656 (729)
Q Consensus 625 -----------------------------------------dlk~~nill---~~~~~~kl~dfgl~~~~~~~~~~---- 656 (729)
||||+||++ +.++.+||+|||+++........
T Consensus 87 ~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (483)
T 3sv0_A 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIP 166 (483)
T ss_dssp CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCC
T ss_pred CCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccc
Confidence 999999999 58899999999999876532221
Q ss_pred --ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC-Cc-c-------------------------h
Q 046589 657 --ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGP-KF-E-------------------------D 707 (729)
Q Consensus 657 --~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~-~~-~-------------------------~ 707 (729)
......++..|+|||......++.++|||||||++|||++|+.|+.. .. . +
T Consensus 167 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 246 (483)
T 3sv0_A 167 YRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPT 246 (483)
T ss_dssp CCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCH
T ss_pred cccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcH
Confidence 11245788999999998888899999999999999999999999864 10 0 0
Q ss_pred --HHHHhhcccCCCCCCCCcccc
Q 046589 708 --KDIVVGCVSDNPIAKPGMLRV 728 (729)
Q Consensus 708 --~~l~~~c~~~~p~~Rp~~~~v 728 (729)
.+++..||+.+|++||++++|
T Consensus 247 ~l~~li~~cl~~dP~~RPs~~el 269 (483)
T 3sv0_A 247 EFASYFHYCRSLRFDDKPDYSYL 269 (483)
T ss_dssp HHHHHHHHHHTCCTTCCCCHHHH
T ss_pred HHHHHHHHHhcCChhhCcCHHHH
Confidence 078999999999999999986
No 194
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=3.6e-18 Score=169.55 Aligned_cols=153 Identities=18% Similarity=0.182 Sum_probs=120.2
Q ss_pred EEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCc-ccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeecc
Q 046589 109 YQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPS-PQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSN 187 (729)
Q Consensus 109 ~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N 187 (729)
.++++++.++. +|..+. ..+++|+|++|.+++..+ ..|..+++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 57777777763 665443 356788888888887754 45788888888888888888777778888888888888888
Q ss_pred CCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEccccccccc
Q 046589 188 SFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGN 265 (729)
Q Consensus 188 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 265 (729)
++++..|..|.++++|++|+|++|.+++..|..|..+++|++|+|++|.+++ +++..|..+++|++|++++|.+.+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITT-VAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCC-BCTTTTTTCTTCCEEECCSCCEECS
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCE-ECHHHhcCCCCCCEEEecCcCCcCC
Confidence 8887777778888888888888888887778888888888888888888874 4446778888888888888887754
No 195
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.77 E-value=2e-19 Score=192.47 Aligned_cols=104 Identities=23% Similarity=0.380 Sum_probs=82.5
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCC--CCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA--RKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~--~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++.++.+||+|||+++..............+|.+|+|||.... ..++.++|||||||++|||+||+.|+.
T Consensus 184 Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~ 263 (355)
T 1vzo_A 184 DIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT 263 (355)
T ss_dssp CCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTS
T ss_pred CCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCc
Confidence 999999999999999999999998754322223334578999999998764 457889999999999999999999985
Q ss_pred CCc-----------------------ch--HHHHhhcccCCCCCCC-----Ccccc
Q 046589 703 PKF-----------------------ED--KDIVVGCVSDNPIAKP-----GMLRV 728 (729)
Q Consensus 703 ~~~-----------------------~~--~~l~~~c~~~~p~~Rp-----~~~~v 728 (729)
... .. .+++.+|+..+|++|| +++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~el 319 (355)
T 1vzo_A 264 VDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEI 319 (355)
T ss_dssp CTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHH
T ss_pred cCCccchHHHHHHHHhccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHH
Confidence 210 00 1799999999999999 77765
No 196
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.77 E-value=5.6e-19 Score=195.89 Aligned_cols=105 Identities=30% Similarity=0.444 Sum_probs=76.9
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
+.|.....||.|+||.||+|... +|+.||||+
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 56778889999999999999875 788999995
Q ss_pred ------------------------------------------------cccccceEecCCccEEEeecCCccccCCCCC-
Q 046589 625 ------------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKS- 655 (729)
Q Consensus 625 ------------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~- 655 (729)
|+||+|||++.++.+||+|||+|+.......
T Consensus 133 ~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 212 (458)
T 3rp9_A 133 YVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENG 212 (458)
T ss_dssp EEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTC
T ss_pred EEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCcccc
Confidence 9999999999999999999999987642111
Q ss_pred -------------------------cceecccccccccCcccc-CCCCCCchhhHHHHHHHHHHHHhC
Q 046589 656 -------------------------HISTDVASAISYVPPEYG-RARKANERDNIYRFGVVLLELVIR 697 (729)
Q Consensus 656 -------------------------~~~~~~~~~~~y~ape~~-~~~~~~~~~Dv~s~G~vl~el~tg 697 (729)
...+...+|.+|+|||.. ....++.++||||+||++|||+||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 213 NSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 112345779999999964 456789999999999999999994
No 197
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.77 E-value=1.2e-19 Score=203.00 Aligned_cols=105 Identities=26% Similarity=0.459 Sum_probs=85.2
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~ 703 (729)
|+||+||+++.++.+||+|||+++..............++..|+|||......++.++|||||||++|||+| |+.|+..
T Consensus 343 Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~ 422 (495)
T 1opk_A 343 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 422 (495)
T ss_dssp CCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999998765322222223455678999998877788999999999999999999 8888752
Q ss_pred -Ccc-------------------hH--HHHhhcccCCCCCCCCccccC
Q 046589 704 -KFE-------------------DK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 -~~~-------------------~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... +. +++..||+.+|++||||++|+
T Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~ 470 (495)
T 1opk_A 423 IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIH 470 (495)
T ss_dssp CCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHH
Confidence 100 11 799999999999999999873
No 198
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.77 E-value=3.3e-19 Score=183.94 Aligned_cols=102 Identities=27% Similarity=0.548 Sum_probs=82.8
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++.++++|||++...... ......++..|+|||......++.++||||+||++|||++|+.|+...
T Consensus 134 dlkp~Nili~~~~~~~l~Dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 210 (279)
T 3fdn_A 134 DIKPENLLLGSAGELKIADFGWSVHAPSS---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210 (279)
T ss_dssp CCCGGGEEECTTSCEEECSCCEESCC-----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred cCChHhEEEcCCCCEEEEeccccccCCcc---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC
Confidence 99999999999999999999988654321 123456788999999888888899999999999999999999998731
Q ss_pred -cc------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 705 -FE------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 705 -~~------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. + .+++..|++.+|++|||++|++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l 256 (279)
T 3fdn_A 211 TYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 256 (279)
T ss_dssp SHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred cHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHh
Confidence 11 1 1799999999999999999874
No 199
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.77 E-value=3.7e-19 Score=186.58 Aligned_cols=104 Identities=23% Similarity=0.337 Sum_probs=79.8
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++...... .......++.+|+|||...+ ..++.++||||+||++|||+||+.|+..
T Consensus 127 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 205 (311)
T 4agu_A 127 DVKPENILITKHSVIKLCDFGFARLLTGPS-DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPG 205 (311)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECC-------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCChhhEEEcCCCCEEEeeCCCchhccCcc-cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999998765322 12234567889999997754 6679999999999999999999999753
Q ss_pred Ccc----------------------------------------------------hHHHHhhcccCCCCCCCCccccC
Q 046589 704 KFE----------------------------------------------------DKDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~~~----------------------------------------------------~~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.-. -.+++..|++.+|++|||++|++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 283 (311)
T 4agu_A 206 KSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLL 283 (311)
T ss_dssp SSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHH
T ss_pred CCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHh
Confidence 100 01599999999999999999874
No 200
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.77 E-value=5.8e-19 Score=189.20 Aligned_cols=103 Identities=21% Similarity=0.267 Sum_probs=84.4
Q ss_pred cccccceEecC-CccEEEeecCCccccCCCCCcceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLNE-DFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~-~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++. ++.+||+|||+++...... ......++.+|+|||...+ ..++.++|||||||++|||+||+.|+.
T Consensus 156 Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~ 233 (360)
T 3e3p_A 156 DIKPHNVLVNEADGTLKLCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFR 233 (360)
T ss_dssp CCCGGGEEEETTTTEEEECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCCHHHEEEeCCCCcEEEeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcC
Confidence 99999999996 8999999999998765322 2234567889999997754 458999999999999999999999986
Q ss_pred CCc----------------------------------------c-------------hHHHHhhcccCCCCCCCCccccC
Q 046589 703 PKF----------------------------------------E-------------DKDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~~----------------------------------------~-------------~~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
..- . -.+++..|++.+|++|||++|++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l 313 (360)
T 3e3p_A 234 GDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEAL 313 (360)
T ss_dssp CSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred CCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHh
Confidence 310 0 01699999999999999999875
No 201
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.76 E-value=5.7e-19 Score=187.93 Aligned_cols=100 Identities=18% Similarity=0.351 Sum_probs=83.3
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++++|++|||+++...... .......+|..|+|||......++.++||||+||++|||+||+.|+...
T Consensus 135 Dlkp~NIll~~~g~~kL~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 213 (345)
T 3a8x_A 135 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 213 (345)
T ss_dssp CCCGGGEEECTTSCEEECCGGGCBCSCCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTT
T ss_pred CCCHHHEEECCCCCEEEEeccccccccCCC-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCc
Confidence 999999999999999999999998643211 2233567899999999988888999999999999999999999998520
Q ss_pred ------------------------c----ch--HHHHhhcccCCCCCCCCc
Q 046589 705 ------------------------F----ED--KDIVVGCVSDNPIAKPGM 725 (729)
Q Consensus 705 ------------------------~----~~--~~l~~~c~~~~p~~Rp~~ 725 (729)
+ .. .+++.+|+..+|++||++
T Consensus 214 ~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 214 GSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp TC-------CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ccccccccccHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 0 00 179999999999999996
No 202
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.76 E-value=4.5e-19 Score=182.79 Aligned_cols=104 Identities=22% Similarity=0.421 Sum_probs=67.0
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++.+|++|||++........ ......++..|+|||......++.++||||+||++|||+||+.|+...
T Consensus 137 dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 215 (278)
T 3cok_A 137 DLTLSNLLLTRNMNIKIADFGLATQLKMPHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD 215 (278)
T ss_dssp SCCGGGEEECTTCCEEECCCTTCEECC-----------------------------CTHHHHHHHHHHHHHHSSCSSCCC
T ss_pred CCCHHHEEEcCCCCEEEEeecceeeccCCCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCh
Confidence 9999999999999999999999987542211 122346788999999888788899999999999999999999997631
Q ss_pred -cc------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 705 -FE------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 705 -~~------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. . .+++.+|+..+|++|||+++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l 261 (278)
T 3cok_A 216 TVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVL 261 (278)
T ss_dssp SCC-----CCSSCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred hHHHHHHHHhhcccCCccccCHHHHHHHHHHcccCHhhCCCHHHHh
Confidence 00 1 1799999999999999999875
No 203
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.76 E-value=1.8e-19 Score=185.84 Aligned_cols=136 Identities=27% Similarity=0.469 Sum_probs=112.0
Q ss_pred cccccccCCCCCCcceEEEeecCCCCceeeec------------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMPDGKTVAVKK------------------------------------------------ 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~~~~~~avk~------------------------------------------------ 624 (729)
+.+.....+|+|+||.||+|...+++.||||.
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~ 92 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENG 92 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTC
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecCCCC
Confidence 45666778999999999999998888999995
Q ss_pred -----------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceecccc
Q 046589 625 -----------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS 663 (729)
Q Consensus 625 -----------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~ 663 (729)
|+||+||+++.++.+|++|||+++..............+
T Consensus 93 ~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 172 (279)
T 1qpc_A 93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 172 (279)
T ss_dssp BHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCC
T ss_pred CHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCC
Confidence 999999999999999999999998765322222223455
Q ss_pred cccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcc--------------------h--HHHHhhcccCCCC
Q 046589 664 AISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTGPKFE--------------------D--KDIVVGCVSDNPI 720 (729)
Q Consensus 664 ~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~--------------------~--~~l~~~c~~~~p~ 720 (729)
+..|+|||......++.++||||+||++|||+| |+.|+...-. + .+++..|++.+|+
T Consensus 173 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 252 (279)
T 1qpc_A 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPE 252 (279)
T ss_dssp CTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred ccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHHHHHHHHHHhccChh
Confidence 678999998877778999999999999999999 8888753100 1 1799999999999
Q ss_pred CCCCcccc
Q 046589 721 AKPGMLRV 728 (729)
Q Consensus 721 ~Rp~~~~v 728 (729)
+|||++++
T Consensus 253 ~Rps~~~l 260 (279)
T 1qpc_A 253 DRPTFDYL 260 (279)
T ss_dssp GSCCHHHH
T ss_pred hCCCHHHH
Confidence 99999886
No 204
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.76 E-value=6.8e-19 Score=187.68 Aligned_cols=132 Identities=21% Similarity=0.337 Sum_probs=112.4
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
++|.....||.|+||.||+|+.. +|+.||||.
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 46777788999999999999985 788999995
Q ss_pred ---------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCccee
Q 046589 625 ---------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHIST 659 (729)
Q Consensus 625 ---------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~ 659 (729)
|+||+||+++.++.+|++|||+++..... ..
T Consensus 121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~----~~ 196 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TW 196 (350)
T ss_dssp ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC----BC
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC----cc
Confidence 99999999999999999999999875431 22
Q ss_pred cccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-------------------ch--HHHHhhcccCC
Q 046589 660 DVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPKF-------------------ED--KDIVVGCVSDN 718 (729)
Q Consensus 660 ~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~-------------------~~--~~l~~~c~~~~ 718 (729)
...+|..|+|||......++.++||||+||++|||++|+.|+...- .. .+++.+|++.+
T Consensus 197 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~lL~~d 276 (350)
T 1rdq_E 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHHHHSCSC
T ss_pred cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcC
Confidence 4578899999998888889999999999999999999999986311 11 18999999999
Q ss_pred CCCCCC-----cccc
Q 046589 719 PIAKPG-----MLRV 728 (729)
Q Consensus 719 p~~Rp~-----~~~v 728 (729)
|++||+ ++++
T Consensus 277 p~~R~~~~~~~~~ei 291 (350)
T 1rdq_E 277 LTKRFGNLKNGVNDI 291 (350)
T ss_dssp TTTCTTSSTTTTHHH
T ss_pred HHhccCCccCCHHHH
Confidence 999998 6654
No 205
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.76 E-value=9.1e-19 Score=181.39 Aligned_cols=101 Identities=22% Similarity=0.446 Sum_probs=82.4
Q ss_pred cccccceEecCCcc-----EEEeecCCccccCCCCCcceecccccccccCcccc--CCCCCCchhhHHHHHHHHHHHHhC
Q 046589 625 DIKASNILLNEDFD-----AKVLDFGLARLISDCKSHISTDVASAISYVPPEYG--RARKANERDNIYRFGVVLLELVIR 697 (729)
Q Consensus 625 dlk~~nill~~~~~-----~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~--~~~~~~~~~Dv~s~G~vl~el~tg 697 (729)
|+||+||+++.++. +|++|||+++.... ......++..|+|||.. ....++.++||||+||++|||+||
T Consensus 149 dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g 224 (287)
T 4f0f_A 149 DLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224 (287)
T ss_dssp CCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHS
T ss_pred CCCcceEEEeccCCCCceeEEeCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcC
Confidence 99999999987766 99999999975432 23445788999999987 345678999999999999999999
Q ss_pred CCCCCC-Ccc----------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 698 KQPTGP-KFE----------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 698 ~~p~~~-~~~----------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+.|+.. ... + .+++..||+.+|++|||+++++
T Consensus 225 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll 281 (287)
T 4f0f_A 225 EGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIV 281 (287)
T ss_dssp SCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHH
Confidence 999863 100 0 1799999999999999999873
No 206
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.76 E-value=4.2e-19 Score=192.95 Aligned_cols=103 Identities=20% Similarity=0.330 Sum_probs=81.0
Q ss_pred cccccceEecC---CccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNE---DFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~---~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++. ++.+||+|||+++..... .......+|.+|+|||......++.++|||||||++|||+||+.|+
T Consensus 186 Dlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf 263 (400)
T 1nxk_A 186 DVKPENLLYTSKRPNAILKLTDFGFAKETTSH--NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263 (400)
T ss_dssp CCCGGGEEESSSSTTCCEEECCCTTCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSC
T ss_pred CcCcceEEEecCCCCccEEEEecccccccCCC--CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCC
Confidence 99999999997 789999999999875431 2223457789999999988888999999999999999999999998
Q ss_pred CCC------------------------cc---h--HHHHhhcccCCCCCCCCccccC
Q 046589 702 GPK------------------------FE---D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~------------------------~~---~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... |. + .+++..|+..+|++|||+++++
T Consensus 264 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil 320 (400)
T 1nxk_A 264 YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFM 320 (400)
T ss_dssp CCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred CCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 521 00 0 1799999999999999999873
No 207
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.76 E-value=4.9e-19 Score=189.14 Aligned_cols=104 Identities=18% Similarity=0.282 Sum_probs=85.2
Q ss_pred cccccceEecCCc---cEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNEDF---DAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~---~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++.++ .+|++|||+++...... .......+|.+|+|||......++.++||||+||++|||+||+.|+
T Consensus 155 Dlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf 233 (351)
T 3c0i_A 155 DVKPHCVLLASKENSAPVKLGGFGVAIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233 (351)
T ss_dssp CCSGGGEEECSSSTTCCEEECCCTTCEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cCChHHeEEecCCCCCcEEEecCcceeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCC
Confidence 9999999998654 49999999998765322 2233457889999999988888999999999999999999999998
Q ss_pred CCC--------------cc--------h--HHHHhhcccCCCCCCCCccccC
Q 046589 702 GPK--------------FE--------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~--------------~~--------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... +. + .+++.+|+..+|++|||+++++
T Consensus 234 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l 285 (351)
T 3c0i_A 234 YGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEAL 285 (351)
T ss_dssp CSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCcHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 631 00 0 1799999999999999999863
No 208
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.76 E-value=5.2e-19 Score=190.37 Aligned_cols=103 Identities=18% Similarity=0.241 Sum_probs=85.4
Q ss_pred cccccceEe--cCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILL--NEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill--~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||++ +.++.+||+|||+++...... ......++.+|+|||......++.++|||||||++|||+||+.|+.
T Consensus 212 Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~ 289 (373)
T 2x4f_A 212 DLKPENILCVNRDAKQIKIIDFGLARRYKPRE--KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFL 289 (373)
T ss_dssp CCCGGGEEEEETTTTEEEECCCSSCEECCTTC--BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred cCCHHHEEEecCCCCcEEEEeCCCceecCCcc--ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCC
Confidence 999999999 567899999999998765322 2234468899999998887888999999999999999999999986
Q ss_pred CC-------------cc----------h--HHHHhhcccCCCCCCCCccccC
Q 046589 703 PK-------------FE----------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~-------------~~----------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. |. + .+++.+|++.+|++|||++|++
T Consensus 290 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l 341 (373)
T 2x4f_A 290 GDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEAL 341 (373)
T ss_dssp CSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred CCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 31 10 1 1799999999999999999863
No 209
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.76 E-value=5.9e-19 Score=195.29 Aligned_cols=103 Identities=23% Similarity=0.422 Sum_probs=85.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKA-NERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~-~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++..... .......++.+|+|||...+..+ +.++||||+||++|||++|+.|+..
T Consensus 141 DLkp~NIll~~~~~vkL~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~ 218 (476)
T 2y94_A 141 DLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD 218 (476)
T ss_dssp CCSGGGEEECTTCCEEECCCSSCEECCTT--CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccHHHEEEecCCCeEEEeccchhhcccc--ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCC
Confidence 99999999999999999999999876532 22334578899999998876654 6899999999999999999999874
Q ss_pred Ccc-------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 704 KFE-------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~~~-------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... . .+++..|+..+|++|||+++++
T Consensus 219 ~~~~~~~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil 265 (476)
T 2y94_A 219 DHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIR 265 (476)
T ss_dssp SSSHHHHHHHHTTCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCHHHHHHHHhcCCcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 211 1 1799999999999999999863
No 210
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.76 E-value=5.5e-19 Score=191.07 Aligned_cols=74 Identities=22% Similarity=0.288 Sum_probs=64.1
Q ss_pred cccccceEec--CCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLN--EDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~--~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++ .++.+||+|||+++..... .....++.+|+|||...+..++.++|||||||++|||+||+.|+.
T Consensus 184 Dlkp~NIll~~~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~ 259 (382)
T 2vx3_A 184 DLKPENILLCNPKRSAIKIVDFGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 259 (382)
T ss_dssp CCSGGGEEESSTTSCCEEECCCTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCCcccEEEecCCCCcEEEEeccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999995 5788999999999876431 234567889999999888889999999999999999999999986
No 211
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.76 E-value=2.9e-19 Score=190.50 Aligned_cols=105 Identities=19% Similarity=0.214 Sum_probs=85.3
Q ss_pred cccccceEecCCc--cEEEeecCCccccCCCCC------cceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh
Q 046589 625 DIKASNILLNEDF--DAKVLDFGLARLISDCKS------HISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI 696 (729)
Q Consensus 625 dlk~~nill~~~~--~~kl~dfgl~~~~~~~~~------~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t 696 (729)
|+||+||+++.++ .+|++|||+++....... .......++..|+|||...+..++.++|||||||++|||+|
T Consensus 176 Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~ 255 (345)
T 2v62_A 176 DIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLC 255 (345)
T ss_dssp CCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHh
Confidence 9999999999777 999999999987642211 11134578899999999888889999999999999999999
Q ss_pred CCCCCCC---C---------------------------cchH--HHHhhcccCCCCCCCCccccC
Q 046589 697 RKQPTGP---K---------------------------FEDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 697 g~~p~~~---~---------------------------~~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|+.|+.. . ..++ +++..||+.+|++|||+++|+
T Consensus 256 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~ 320 (345)
T 2v62_A 256 GKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALK 320 (345)
T ss_dssp SSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHH
T ss_pred CCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 9999842 0 0001 789999999999999999873
No 212
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.76 E-value=1.8e-19 Score=187.47 Aligned_cols=105 Identities=26% Similarity=0.424 Sum_probs=81.0
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc--ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH--ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++........ ......++..|+|||......++.++|||||||++||++||+.|+.
T Consensus 139 Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~ 218 (295)
T 3ugc_A 139 DLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 218 (295)
T ss_dssp CCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTC
T ss_pred CCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccC
Confidence 99999999999999999999999876532211 1123456677999998887889999999999999999999988865
Q ss_pred CC------------------------------------cchH--HHHhhcccCCCCCCCCccccC
Q 046589 703 PK------------------------------------FEDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~------------------------------------~~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. +.+. +++..||+.+|++|||++|++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~ 283 (295)
T 3ugc_A 219 SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 283 (295)
T ss_dssp SHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred CChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence 21 0011 799999999999999999873
No 213
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.76 E-value=2e-19 Score=193.37 Aligned_cols=105 Identities=27% Similarity=0.350 Sum_probs=83.0
Q ss_pred cccccceEecCC---ccEEEeecCCccccCCCCC-cceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCC
Q 046589 625 DIKASNILLNED---FDAKVLDFGLARLISDCKS-HISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQ 699 (729)
Q Consensus 625 dlk~~nill~~~---~~~kl~dfgl~~~~~~~~~-~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~ 699 (729)
|+||+||+++.+ ..+|++|||+++....... .......++.+|+|||......++.++|||||||++|||+| |+.
T Consensus 206 Dlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~ 285 (367)
T 3l9p_A 206 DIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYM 285 (367)
T ss_dssp CCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 999999999954 4699999999986432111 12223466789999998877889999999999999999998 888
Q ss_pred CCCCCcc--------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 700 PTGPKFE--------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 700 p~~~~~~--------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|+...-. . .+++..||+.+|++|||+++|+
T Consensus 286 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil 337 (367)
T 3l9p_A 286 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 337 (367)
T ss_dssp SSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence 8763110 0 1799999999999999999874
No 214
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.76 E-value=2.2e-19 Score=185.52 Aligned_cols=105 Identities=23% Similarity=0.412 Sum_probs=74.7
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++..............++..|+|||......++.++||||+||++|||++ |+.|+..
T Consensus 141 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~ 220 (281)
T 1mp8_A 141 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 220 (281)
T ss_dssp CCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCc
Confidence 999999999999999999999998765322222223455678999998877788999999999999999997 8888763
Q ss_pred C-cc-------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 704 K-FE-------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~-~~-------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. .. + .+++..|++.+|++|||+++++
T Consensus 221 ~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~ 268 (281)
T 1mp8_A 221 VKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELK 268 (281)
T ss_dssp CCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 1 00 0 1799999999999999999863
No 215
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.76 E-value=7.5e-19 Score=183.58 Aligned_cols=104 Identities=25% Similarity=0.478 Sum_probs=86.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++.+|++|||+++...... .......++..|+|||......++.++|||||||++|||+||+.|+...
T Consensus 144 dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 222 (303)
T 3a7i_A 144 DIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222 (303)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECBTTB-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred CCChheEEECCCCCEEEeecccceecCccc-cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCc
Confidence 999999999999999999999998765321 1123456788999999988888899999999999999999999997631
Q ss_pred --------------------cch--HHHHhhcccCCCCCCCCccccC
Q 046589 705 --------------------FED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 705 --------------------~~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+.. .+++..|+..+|++|||+++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll 269 (303)
T 3a7i_A 223 HPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 269 (303)
T ss_dssp CHHHHHHHHHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHT
T ss_pred CHHHHHHHhhcCCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 001 1799999999999999999875
No 216
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.76 E-value=3.3e-19 Score=187.12 Aligned_cols=104 Identities=27% Similarity=0.494 Sum_probs=78.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc--ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH--ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++........ ......++.+|+|||......++.++||||+||++|||+||+.|+.
T Consensus 141 dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~ 220 (311)
T 3ork_A 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220 (311)
T ss_dssp CCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999875432211 1223467899999998888889999999999999999999999986
Q ss_pred CCcc-----------------------h--HHHHhhcccCCCCCCCCcccc
Q 046589 703 PKFE-----------------------D--KDIVVGCVSDNPIAKPGMLRV 728 (729)
Q Consensus 703 ~~~~-----------------------~--~~l~~~c~~~~p~~Rp~~~~v 728 (729)
..-. + .+++.+|++.+|++||+..++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~ 271 (311)
T 3ork_A 221 GDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAE 271 (311)
T ss_dssp CSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHH
T ss_pred CCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHH
Confidence 3110 0 178999999999999988764
No 217
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.76 E-value=2.3e-19 Score=189.77 Aligned_cols=105 Identities=21% Similarity=0.318 Sum_probs=79.2
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc-ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH-ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++........ ......++..|+|||......++.++||||+||++|||+| |+.|+.
T Consensus 142 Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~ 221 (327)
T 3lzb_A 142 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221 (327)
T ss_dssp CCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred CCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999999876432221 1223455678999998888889999999999999999999 999876
Q ss_pred C-Ccc-------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 703 P-KFE-------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~-~~~-------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. ... . .+++..||..+|++||+++|++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 270 (327)
T 3lzb_A 222 GIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELI 270 (327)
T ss_dssp TCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 3 110 0 1799999999999999999873
No 218
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=9e-18 Score=167.80 Aligned_cols=152 Identities=26% Similarity=0.253 Sum_probs=127.9
Q ss_pred EEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccC
Q 046589 109 YQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNS 188 (729)
Q Consensus 109 ~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~ 188 (729)
.++.+++.+. .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|+|+...+..|..+++|++|+|++|+
T Consensus 23 ~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 23 TVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 4667767765 4665443 789999999999999888889999999999999999986666778899999999999999
Q ss_pred CCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEccccccccc
Q 046589 189 FTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGN 265 (729)
Q Consensus 189 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 265 (729)
+++..+..|..+++|++|+|++|+++ .+|..+..+++|++|+|++|+++ .++...|..+++|+.|++++|.+.+.
T Consensus 100 l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 100 LTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCC-ccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 98777777889999999999999998 77888889999999999999988 56657788889999999999988754
No 219
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.76 E-value=8.5e-19 Score=187.30 Aligned_cols=105 Identities=25% Similarity=0.316 Sum_probs=84.7
Q ss_pred cccccceEecCCccEEEeecCCccccCCCC---CcceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCK---SHISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQP 700 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~---~~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p 700 (729)
|+||+||+++.++.+|++|||+++...... ........++.+|+|||...+ ..++.++||||+||++|||+||+.|
T Consensus 149 Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p 228 (351)
T 3mi9_A 149 DMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPI 228 (351)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999998754211 112234567899999997754 5579999999999999999999998
Q ss_pred CCCC--------------------cc---------------------------------hHHHHhhcccCCCCCCCCccc
Q 046589 701 TGPK--------------------FE---------------------------------DKDIVVGCVSDNPIAKPGMLR 727 (729)
Q Consensus 701 ~~~~--------------------~~---------------------------------~~~l~~~c~~~~p~~Rp~~~~ 727 (729)
+... |. -.+++.+|++.+|++|||++|
T Consensus 229 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 308 (351)
T 3mi9_A 229 MQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDD 308 (351)
T ss_dssp CCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred CCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHH
Confidence 7521 10 016999999999999999998
Q ss_pred cC
Q 046589 728 VQ 729 (729)
Q Consensus 728 v~ 729 (729)
++
T Consensus 309 ~l 310 (351)
T 3mi9_A 309 AL 310 (351)
T ss_dssp HH
T ss_pred Hh
Confidence 74
No 220
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.76 E-value=4.5e-19 Score=187.52 Aligned_cols=103 Identities=22% Similarity=0.362 Sum_probs=83.1
Q ss_pred cccccceEecC---CccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNE---DFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~---~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++. ++.+|++|||+++...... ......++.+|+|||......++.++||||+||++|||+||+.|+
T Consensus 156 Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf 233 (327)
T 3lm5_A 156 DLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233 (327)
T ss_dssp CCCGGGEEESCBTTBCCEEECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cCChHHEEEecCCCCCcEEEeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 99999999997 7899999999998764321 123457889999999988888999999999999999999999998
Q ss_pred CCCcc-----------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 702 GPKFE-----------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~~~-----------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
...-. + .+++..|++.+|++|||+++++
T Consensus 234 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll 286 (327)
T 3lm5_A 234 VGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICL 286 (327)
T ss_dssp CCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred CCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 53100 0 1799999999999999999875
No 221
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.76 E-value=7.3e-19 Score=196.91 Aligned_cols=101 Identities=22% Similarity=0.388 Sum_probs=84.8
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++++||+|||+++....... ......||..|+|||...+..++.++||||+||++|||+||+.||...
T Consensus 314 DLKP~NILl~~~g~vkL~DFGla~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~ 392 (543)
T 3c4z_A 314 DLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392 (543)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEECCTTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred CCChHHEEEeCCCCEEEeecceeeeccCCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999987653222 123457899999999988888999999999999999999999998641
Q ss_pred c----c-------------------h--HHHHhhcccCCCCCCCCcc
Q 046589 705 F----E-------------------D--KDIVVGCVSDNPIAKPGML 726 (729)
Q Consensus 705 ~----~-------------------~--~~l~~~c~~~~p~~Rp~~~ 726 (729)
- . . .+++.+|+..+|++||++.
T Consensus 393 ~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 393 GEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp TCCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred ccchhHHHHHHHHhhcccCCCcccCHHHHHHHHHhccCCHhHCCCCc
Confidence 0 0 0 1799999999999999874
No 222
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.76 E-value=8.7e-19 Score=182.23 Aligned_cols=104 Identities=22% Similarity=0.410 Sum_probs=86.9
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++.+|++|||+++....... ......++.+|+|||......++.++||||+||++|||+||+.|+...
T Consensus 140 dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 218 (294)
T 2rku_A 140 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218 (294)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEECCSTTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred CCChHhEEEcCCCCEEEEeccCceecccCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999987643221 223456788999999888888899999999999999999999998631
Q ss_pred cc-------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 705 FE-------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 705 ~~-------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. . .+++.+|+..+|++|||+++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll 264 (294)
T 2rku_A 219 CLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 264 (294)
T ss_dssp SHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGG
T ss_pred CHHHHHHHHhhccCCCccccCHHHHHHHHHHcccChhhCcCHHHHh
Confidence 11 1 1799999999999999999974
No 223
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.76 E-value=5.8e-19 Score=190.68 Aligned_cols=103 Identities=20% Similarity=0.321 Sum_probs=85.5
Q ss_pred cccccceEecC--CccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLNE--DFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~--~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++. ++.+|++|||+++..... .......+|.+|+|||......++.++||||+||++|||+||+.|+.
T Consensus 174 Dlkp~NIll~~~~~~~vkL~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 251 (387)
T 1kob_A 174 DIKPENIMCETKKASSVKIIDFGLATKLNPD--EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFA 251 (387)
T ss_dssp CCCGGGEEESSTTCCCEEECCCTTCEECCTT--SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSC
T ss_pred ccchHHeEEecCCCCceEEEecccceecCCC--cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCC
Confidence 99999999984 478999999999876532 22334578899999999888889999999999999999999999986
Q ss_pred CC-------------c----------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 703 PK-------------F----------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~-------------~----------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. | .+ .+++..|+..+|++|||+++++
T Consensus 252 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell 303 (387)
T 1kob_A 252 GEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDAL 303 (387)
T ss_dssp CSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred CCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence 31 0 01 1799999999999999999863
No 224
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.76 E-value=1.8e-19 Score=191.31 Aligned_cols=105 Identities=20% Similarity=0.382 Sum_probs=81.9
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCC-------cceecccccccccCccccCC-------CCCCchhhHHHHHHH
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKS-------HISTDVASAISYVPPEYGRA-------RKANERDNIYRFGVV 690 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~-------~~~~~~~~~~~y~ape~~~~-------~~~~~~~Dv~s~G~v 690 (729)
|+||+||+++.++.+|++|||+++....... .......+|..|+|||...+ ..++.++|||||||+
T Consensus 145 Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~i 224 (336)
T 3g2f_A 145 DLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLI 224 (336)
T ss_dssp SCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHH
T ss_pred ccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHH
Confidence 8999999999999999999999987643211 11123468899999998765 355678999999999
Q ss_pred HHHHHhCCCCCCC---------------------------------------Ccc--------hHHHHhhcccCCCCCCC
Q 046589 691 LLELVIRKQPTGP---------------------------------------KFE--------DKDIVVGCVSDNPIAKP 723 (729)
Q Consensus 691 l~el~tg~~p~~~---------------------------------------~~~--------~~~l~~~c~~~~p~~Rp 723 (729)
+|||+||+.|+.. .|. -.+++..||+.+|++||
T Consensus 225 l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 304 (336)
T 3g2f_A 225 YWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARL 304 (336)
T ss_dssp HHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSC
T ss_pred HHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCc
Confidence 9999999777531 000 11789999999999999
Q ss_pred CccccC
Q 046589 724 GMLRVQ 729 (729)
Q Consensus 724 ~~~~v~ 729 (729)
|++||+
T Consensus 305 s~~e~l 310 (336)
T 3g2f_A 305 TAQXAE 310 (336)
T ss_dssp CHHHHH
T ss_pred chHHHH
Confidence 999873
No 225
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.76 E-value=5.8e-19 Score=194.02 Aligned_cols=76 Identities=34% Similarity=0.414 Sum_probs=59.1
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc---------------------ceecccccccccCcccc-CCCCCCchh
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH---------------------ISTDVASAISYVPPEYG-RARKANERD 682 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~---------------------~~~~~~~~~~y~ape~~-~~~~~~~~~ 682 (729)
|+||+||+++.++.+||+|||+|+........ ..+...+|.+|+|||.. ....++.++
T Consensus 154 Dlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~ 233 (432)
T 3n9x_A 154 DLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSI 233 (432)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHH
T ss_pred CCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCccc
Confidence 99999999999999999999999876432111 12456789999999974 556789999
Q ss_pred hHHHHHHHHHHHHhCCCC
Q 046589 683 NIYRFGVVLLELVIRKQP 700 (729)
Q Consensus 683 Dv~s~G~vl~el~tg~~p 700 (729)
||||+||++|||+||..|
T Consensus 234 DiwSlG~il~ell~g~~p 251 (432)
T 3n9x_A 234 DIWSTGCIFAELLNMLQS 251 (432)
T ss_dssp HHHHHHHHHHHHHTTCTT
T ss_pred ccchHHHHHHHHHhcccc
Confidence 999999999999985443
No 226
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.76 E-value=5.5e-19 Score=186.78 Aligned_cols=100 Identities=21% Similarity=0.374 Sum_probs=78.8
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++.+|++|||+++...... .......++.+|+|||......++.++||||+||++|||++|+.|+...
T Consensus 146 Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 224 (327)
T 3a62_A 146 DLKPENIMLNHQGHVKLTDFGLCKESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE 224 (327)
T ss_dssp CCCTTTEEECTTSCEEECCCSCC-----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cCCHHHeEECCCCcEEEEeCCcccccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCC
Confidence 999999999999999999999987643211 1223456889999999888888899999999999999999999998631
Q ss_pred cc-------------------h--HHHHhhcccCCCCCCCCc
Q 046589 705 FE-------------------D--KDIVVGCVSDNPIAKPGM 725 (729)
Q Consensus 705 ~~-------------------~--~~l~~~c~~~~p~~Rp~~ 725 (729)
-. + .+++.+|+..+|++||++
T Consensus 225 ~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dp~~R~~~ 266 (327)
T 3a62_A 225 NRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGA 266 (327)
T ss_dssp SHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHSCSCGGGSTTS
T ss_pred CHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhcCHhhccCC
Confidence 11 1 179999999999999943
No 227
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.76 E-value=3.3e-19 Score=189.54 Aligned_cols=103 Identities=25% Similarity=0.425 Sum_probs=84.1
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccC----CCCCCchhhHHHHHHHHHHHHhCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGR----ARKANERDNIYRFGVVLLELVIRKQP 700 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~----~~~~~~~~Dv~s~G~vl~el~tg~~p 700 (729)
|+||+||+++.++.+|++|||+++..... .......++.+|+|||... ...++.++|||||||++|||+||+.|
T Consensus 179 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p 256 (340)
T 3an0_A 179 DVKPSNVLINALGQVKMCDFGISGYLVDS--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 256 (340)
T ss_dssp SCCSTTEEECSTTCEEECCCSHHHHHSCH--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCS
T ss_pred CCCHHHEEECCCCCEEEeeCCCceecccc--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999875421 1122346889999999753 34688999999999999999999999
Q ss_pred CCCC-c---------------------chH--HHHhhcccCCCCCCCCccccC
Q 046589 701 TGPK-F---------------------EDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 701 ~~~~-~---------------------~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+... . ... +++.+|+..+|++|||+++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 309 (340)
T 3an0_A 257 YDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 309 (340)
T ss_dssp SCCCSCHHHHHHHHHHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred CccccchHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHh
Confidence 8631 0 011 799999999999999999875
No 228
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.76 E-value=6.3e-19 Score=182.53 Aligned_cols=102 Identities=28% Similarity=0.429 Sum_probs=79.1
Q ss_pred cccccceEec---CCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLN---EDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~---~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++ .++.+|++|||+++..... .......++..|+|||... ..++.++||||+||++|||+||+.|+
T Consensus 149 dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf 225 (285)
T 3is5_A 149 DLKPENILFQDTSPHSPIKIIDFGLAELFKSD--EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPF 225 (285)
T ss_dssp CCSGGGEEESSSSTTCCEEECCCCCCCC------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred CCCHHHEEEecCCCCCCEEEEeeecceecCCc--ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCC
Confidence 9999999994 5678999999999875432 1223456788999999774 56789999999999999999999998
Q ss_pred CCCc----------------------chH--HHHhhcccCCCCCCCCccccC
Q 046589 702 GPKF----------------------EDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~~----------------------~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
...- .+. +++.+|++.+|++|||++||+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l 277 (285)
T 3is5_A 226 TGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVL 277 (285)
T ss_dssp CCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHH
T ss_pred CCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 6310 011 799999999999999999874
No 229
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.76 E-value=3.4e-19 Score=184.06 Aligned_cols=105 Identities=25% Similarity=0.346 Sum_probs=82.8
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++..............++.+|+|||......++.++|||||||++|||+| |+.|+..
T Consensus 138 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~ 217 (281)
T 3cc6_A 138 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 217 (281)
T ss_dssp CCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCccc
Confidence 999999999999999999999998765322222233456778999998877888999999999999999999 9999752
Q ss_pred -Cc-------------------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 704 -KF-------------------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 -~~-------------------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. .+ .+++.+|+..+|++|||+++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell 265 (281)
T 3cc6_A 218 LENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 265 (281)
T ss_dssp SCGGGHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CChHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence 00 01 1799999999999999999873
No 230
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.76 E-value=5.6e-19 Score=191.03 Aligned_cols=105 Identities=27% Similarity=0.425 Sum_probs=85.7
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCC-cceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKS-HISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~-~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+||+++.++.+||+|||+++....... .......++.+|+|||...+..++.++|||||||++|||+| |+.|+.
T Consensus 216 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~ 295 (382)
T 3tt0_A 216 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 295 (382)
T ss_dssp CCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred CCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999987653221 11223456788999998888889999999999999999999 888876
Q ss_pred CC-cc-------------------hH--HHHhhcccCCCCCCCCccccC
Q 046589 703 PK-FE-------------------DK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~-~~-------------------~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. .. ++ +++..||+.+|++|||+++|+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell 344 (382)
T 3tt0_A 296 GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 344 (382)
T ss_dssp TCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 31 10 11 799999999999999999874
No 231
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.76 E-value=1.8e-19 Score=184.44 Aligned_cols=137 Identities=27% Similarity=0.443 Sum_probs=111.4
Q ss_pred cccccccCCCCCCcceEEEeecCCCCceeeec------------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMPDGKTVAVKK------------------------------------------------ 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~~~~~~avk~------------------------------------------------ 624 (729)
+.+...+.+|+|+||.||+|...+++.||||.
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH 87 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCC
Confidence 45566678999999999999998888999996
Q ss_pred -----------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceecccc
Q 046589 625 -----------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS 663 (729)
Q Consensus 625 -----------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~ 663 (729)
|+||+||+++.++.+|++|||+++..............+
T Consensus 88 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 167 (267)
T 3t9t_A 88 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF 167 (267)
T ss_dssp CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTC
T ss_pred CcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccccccccccccc
Confidence 999999999999999999999998754211111123455
Q ss_pred cccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcc--------------------h--HHHHhhcccCCCC
Q 046589 664 AISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTGPKFE--------------------D--KDIVVGCVSDNPI 720 (729)
Q Consensus 664 ~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~--------------------~--~~l~~~c~~~~p~ 720 (729)
+..|+|||......++.++||||+||++|||+| |+.|+...-. . .+++.+|+..+|+
T Consensus 168 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 247 (267)
T 3t9t_A 168 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPE 247 (267)
T ss_dssp CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGG
T ss_pred cccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHHHHHHccCChh
Confidence 678999998877788999999999999999999 8888753100 0 1799999999999
Q ss_pred CCCCccccC
Q 046589 721 AKPGMLRVQ 729 (729)
Q Consensus 721 ~Rp~~~~v~ 729 (729)
+|||+++++
T Consensus 248 ~Rps~~~ll 256 (267)
T 3t9t_A 248 DRPAFSRLL 256 (267)
T ss_dssp GSCCHHHHH
T ss_pred hCcCHHHHH
Confidence 999999863
No 232
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.76 E-value=8.2e-19 Score=183.59 Aligned_cols=104 Identities=33% Similarity=0.611 Sum_probs=83.7
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcc-eecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHI-STDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~-~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++......... .....++.+|+|||...+ .++.++||||+||++|||+||+.|+..
T Consensus 158 dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~ 236 (307)
T 2nru_A 158 DIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDE 236 (307)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCT
T ss_pred CCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCccc
Confidence 999999999999999999999998755322221 223567899999997653 578899999999999999999999763
Q ss_pred C----cc----h----------------------------HHHHhhcccCCCCCCCCccccC
Q 046589 704 K----FE----D----------------------------KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~----~~----~----------------------------~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. .. + .+++..|++.+|.+|||+++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~ 298 (307)
T 2nru_A 237 HREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQ 298 (307)
T ss_dssp TBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHH
Confidence 1 00 0 0689999999999999999873
No 233
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.76 E-value=5.4e-19 Score=191.83 Aligned_cols=103 Identities=21% Similarity=0.281 Sum_probs=84.4
Q ss_pred cccccceEec-CCccEEEeecCCccccCCCCCcceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLN-EDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~-~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++ .++.+||+|||+|+....... .....++.+|+|||...+ ..++.++||||+||++|||++|+.|+.
T Consensus 166 Dlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 243 (394)
T 4e7w_A 166 DIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFP 243 (394)
T ss_dssp CCSGGGEEEETTTTEEEECCCTTCEECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCCHHHEEEcCCCCcEEEeeCCCcccccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999 789999999999987653222 234567889999997754 458999999999999999999999986
Q ss_pred CCc------------------------------------------------chH--HHHhhcccCCCCCCCCccccC
Q 046589 703 PKF------------------------------------------------EDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~~------------------------------------------------~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
..- .++ +++.+|+..+|++|||++|++
T Consensus 244 ~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 320 (394)
T 4e7w_A 244 GESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEAL 320 (394)
T ss_dssp CSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHh
Confidence 310 011 799999999999999998863
No 234
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.76 E-value=8.5e-19 Score=185.50 Aligned_cols=135 Identities=16% Similarity=0.307 Sum_probs=111.8
Q ss_pred cccccccCCCCCCcceEEEeec-CCCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTM-PDGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~-~~~~~~avk~----------------------------------------------- 624 (729)
+.|...+.||+|+||.||+|.. .+++.||||.
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~ 115 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV 115 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEecc
Confidence 5677788899999999999986 5888999995
Q ss_pred ---------------------------------------cccccceEecCCc-cEEEeecCCccccCCCCCcceeccccc
Q 046589 625 ---------------------------------------DIKASNILLNEDF-DAKVLDFGLARLISDCKSHISTDVASA 664 (729)
Q Consensus 625 ---------------------------------------dlk~~nill~~~~-~~kl~dfgl~~~~~~~~~~~~~~~~~~ 664 (729)
|+||+||+++.++ .+|++|||+++...... ......++
T Consensus 116 ~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~ 193 (330)
T 3nsz_A 116 NNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVAS 193 (330)
T ss_dssp CCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC--CCCSCCSC
T ss_pred CchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC--cccccccc
Confidence 9999999999766 89999999998765322 22345678
Q ss_pred ccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCC---------------------------------------
Q 046589 665 ISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQPTGPK--------------------------------------- 704 (729)
Q Consensus 665 ~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p~~~~--------------------------------------- 704 (729)
.+|+|||.... ..++.++||||+||++|||+||+.|+...
T Consensus 194 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (330)
T 3nsz_A 194 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILG 273 (330)
T ss_dssp GGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHC
T ss_pred ccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhh
Confidence 89999998765 67899999999999999999999998321
Q ss_pred ------c------------chH--HHHhhcccCCCCCCCCccccC
Q 046589 705 ------F------------EDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 705 ------~------------~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
| .+. +++.+|++.+|++|||++|++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l 318 (330)
T 3nsz_A 274 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 318 (330)
T ss_dssp CCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred hccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence 0 111 699999999999999999874
No 235
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.75 E-value=1.8e-18 Score=181.71 Aligned_cols=136 Identities=29% Similarity=0.473 Sum_probs=109.4
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
+.|.....+|.|+||.||+|... +|+.||||.
T Consensus 29 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 108 (314)
T 3com_A 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGA 108 (314)
T ss_dssp -CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCC
Confidence 45667778999999999999885 688999995
Q ss_pred -----------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceecccc
Q 046589 625 -----------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS 663 (729)
Q Consensus 625 -----------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~ 663 (729)
|+||+||+++.++.+|++|||+++...... .......+
T Consensus 109 ~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~ 187 (314)
T 3com_A 109 GSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIG 187 (314)
T ss_dssp EEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB-SCBCCCCS
T ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc-cccCccCC
Confidence 999999999999999999999997754321 12234567
Q ss_pred cccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC----------------------cch--HHHHhhcccCCC
Q 046589 664 AISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK----------------------FED--KDIVVGCVSDNP 719 (729)
Q Consensus 664 ~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~----------------------~~~--~~l~~~c~~~~p 719 (729)
+..|+|||......++.++||||+||++|||++|+.|+... |.. .+++..|+..+|
T Consensus 188 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp 267 (314)
T 3com_A 188 TPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSP 267 (314)
T ss_dssp CGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCT
T ss_pred CCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCCh
Confidence 88999999988888899999999999999999999997521 111 179999999999
Q ss_pred CCCCCccccC
Q 046589 720 IAKPGMLRVQ 729 (729)
Q Consensus 720 ~~Rp~~~~v~ 729 (729)
++|||+++++
T Consensus 268 ~~Rpt~~~ll 277 (314)
T 3com_A 268 EQRATATQLL 277 (314)
T ss_dssp TTSCCHHHHT
T ss_pred hhCcCHHHHH
Confidence 9999999875
No 236
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.75 E-value=5.5e-19 Score=189.84 Aligned_cols=103 Identities=12% Similarity=0.041 Sum_probs=83.0
Q ss_pred cccccceEecC-----------CccEEEeecCCccccCCC-CCcceecccccccccCccccCCCCCCchhhHHHHHHHHH
Q 046589 625 DIKASNILLNE-----------DFDAKVLDFGLARLISDC-KSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLL 692 (729)
Q Consensus 625 dlk~~nill~~-----------~~~~kl~dfgl~~~~~~~-~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~ 692 (729)
|+||+||+++. ++.+||+|||+|+..... .........+|.+|+|||...+..++.++|||||||++|
T Consensus 197 DiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 276 (365)
T 3e7e_A 197 DIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVY 276 (365)
T ss_dssp CCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHH
T ss_pred CCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHH
Confidence 99999999998 899999999999765421 222334567899999999988888999999999999999
Q ss_pred HHHhCCCCCCC--------------Ccch---HHHHhhcccCCCCCCC-Cccc
Q 046589 693 ELVIRKQPTGP--------------KFED---KDIVVGCVSDNPIAKP-GMLR 727 (729)
Q Consensus 693 el~tg~~p~~~--------------~~~~---~~l~~~c~~~~p~~Rp-~~~~ 727 (729)
||+||+.|+.. .|.. .+++..|+..+|.+|+ ++++
T Consensus 277 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~ 329 (365)
T 3e7e_A 277 CMLFGTYMKVKNEGGECKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDL 329 (365)
T ss_dssp HHHHSSCCCEEEETTEEEECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHH
T ss_pred HHHhCCCccccCCCCceeechhccccCcHHHHHHHHHHHcCCCCCCcchHHHH
Confidence 99999999752 1111 1789999999999985 4443
No 237
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.75 E-value=1e-18 Score=184.30 Aligned_cols=103 Identities=22% Similarity=0.339 Sum_probs=85.7
Q ss_pred cccccceEecCCc----cEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 046589 625 DIKASNILLNEDF----DAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQP 700 (729)
Q Consensus 625 dlk~~nill~~~~----~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p 700 (729)
|+||+||+++.++ .+|++|||+++...... ......++..|+|||......++.++||||+||++|||+||+.|
T Consensus 140 dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p 217 (321)
T 2a2a_A 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217 (321)
T ss_dssp CCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCS
T ss_pred CCChHHEEEecCCCCcCCEEEccCccceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCC
Confidence 9999999999887 79999999998765321 22345678999999988888889999999999999999999999
Q ss_pred CCCC---------------cch----------HHHHhhcccCCCCCCCCccccC
Q 046589 701 TGPK---------------FED----------KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 701 ~~~~---------------~~~----------~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+... +.. .+++..|+..+|++|||++|++
T Consensus 218 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l 271 (321)
T 2a2a_A 218 FLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEAL 271 (321)
T ss_dssp SCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHH
T ss_pred CCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 8631 110 1799999999999999999863
No 238
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.75 E-value=6.7e-19 Score=185.44 Aligned_cols=103 Identities=18% Similarity=0.286 Sum_probs=83.5
Q ss_pred cccccceEe----cCCccEEEeecCCccccCCCCCcceecccccccccCccccC--------CCCCCchhhHHHHHHHHH
Q 046589 625 DIKASNILL----NEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGR--------ARKANERDNIYRFGVVLL 692 (729)
Q Consensus 625 dlk~~nill----~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~--------~~~~~~~~Dv~s~G~vl~ 692 (729)
|+||+||++ +.++.+|++|||+++...... ......++..|+|||... ...++.++|||||||++|
T Consensus 137 Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~ 214 (319)
T 4euu_A 137 NIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFY 214 (319)
T ss_dssp CCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHH
T ss_pred CCCHHHEEEeccCCCCceEEEccCCCceecCCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHH
Confidence 999999999 788899999999998765322 223456889999999764 467889999999999999
Q ss_pred HHHhCCCCCCC-C---------------------------------cc----------h------HHHHhhcccCCCCCC
Q 046589 693 ELVIRKQPTGP-K---------------------------------FE----------D------KDIVVGCVSDNPIAK 722 (729)
Q Consensus 693 el~tg~~p~~~-~---------------------------------~~----------~------~~l~~~c~~~~p~~R 722 (729)
||+||+.|+.. . |. . .+++..|++.+|++|
T Consensus 215 el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R 294 (319)
T 4euu_A 215 HAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKC 294 (319)
T ss_dssp HHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTS
T ss_pred HHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhh
Confidence 99999999741 0 00 0 068899999999999
Q ss_pred CCccccC
Q 046589 723 PGMLRVQ 729 (729)
Q Consensus 723 p~~~~v~ 729 (729)
||++|++
T Consensus 295 ~s~~ell 301 (319)
T 4euu_A 295 WGFDQFF 301 (319)
T ss_dssp CCHHHHH
T ss_pred ccHHHhh
Confidence 9999863
No 239
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.75 E-value=1.4e-18 Score=186.61 Aligned_cols=101 Identities=22% Similarity=0.267 Sum_probs=84.4
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.+||+|||+++.... ..+...+|.+|+|||...+ ..++.++||||+||++|||++|+.|+..
T Consensus 153 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 228 (367)
T 1cm8_A 153 DLKPGNLAVNEDCELKILDFGLARQADS----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 228 (367)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEECCS----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CcCHHHEEEcCCCCEEEEeeeccccccc----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999987542 1234567899999997665 6789999999999999999999999863
Q ss_pred Cc--------------------------------------------------c--hHHHHhhcccCCCCCCCCccccC
Q 046589 704 KF--------------------------------------------------E--DKDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~~--------------------------------------------------~--~~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.- . ..+++.+|+..+|++|||+++++
T Consensus 229 ~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l 306 (367)
T 1cm8_A 229 SDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEAL 306 (367)
T ss_dssp SSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred CCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHh
Confidence 10 0 01689999999999999999863
No 240
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.75 E-value=1.1e-18 Score=185.32 Aligned_cols=104 Identities=22% Similarity=0.411 Sum_probs=87.0
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++.+|++|||+++...... .......++.+|+|||......++.++|||||||++|||+||+.|+...
T Consensus 166 dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 244 (335)
T 2owb_A 166 DLKLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244 (335)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEECCSTT-CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred CCCchhEEEcCCCCEEEeeccCceecccCc-ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC
Confidence 999999999999999999999998764322 1223456788999999888888899999999999999999999998642
Q ss_pred cc-------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 705 FE-------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 705 ~~-------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. . .+++..|++.+|++|||+++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 290 (335)
T 2owb_A 245 CLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 290 (335)
T ss_dssp SHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGG
T ss_pred CHHHHHHHHhcCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence 11 1 1799999999999999999975
No 241
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.75 E-value=5.1e-19 Score=195.48 Aligned_cols=101 Identities=27% Similarity=0.495 Sum_probs=82.4
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~ 703 (729)
|+||+||+++.++.+||+|||+++..... .....++..|+|||......++.++|||||||++|||+| |+.|+..
T Consensus 314 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~ 389 (450)
T 1k9a_A 314 DLAARNVLVSEDNVAKVSDFGLTKEASST----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 389 (450)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEECC----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred CCCHhhEEECCCCCEEEeeCCCccccccc----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999864321 112355778999999888889999999999999999999 9988752
Q ss_pred -Ccc-------------------hH--HHHhhcccCCCCCCCCccccC
Q 046589 704 -KFE-------------------DK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 -~~~-------------------~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... +. +++..||..+|++|||+++++
T Consensus 390 ~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~ 437 (450)
T 1k9a_A 390 IPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLR 437 (450)
T ss_dssp SCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 100 01 799999999999999999863
No 242
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.75 E-value=8.7e-19 Score=185.24 Aligned_cols=103 Identities=26% Similarity=0.413 Sum_probs=68.2
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCcccc----CCCCCCchhhHHHHHHHHHHHHhCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYG----RARKANERDNIYRFGVVLLELVIRKQP 700 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~----~~~~~~~~~Dv~s~G~vl~el~tg~~p 700 (729)
|+||+||+++.++.+|++|||+++...... ......++.+|+|||.. ....++.++|||||||++|||+||+.|
T Consensus 151 dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 228 (327)
T 3aln_A 151 DIKPSNILLDRSGNIKLCDFGISGQLVDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228 (327)
T ss_dssp CCCGGGEEEETTTEEEECCCSSSCC--------------------------------CCSHHHHHHHHHHHHHHHHSCCC
T ss_pred CCCHHHEEEcCCCCEEEccCCCceeccccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999999998754321 12234678899999987 456688999999999999999999999
Q ss_pred CCCC-----------------c--------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 701 TGPK-----------------F--------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 701 ~~~~-----------------~--------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+... + .+ .+++..|++.+|++|||+++++
T Consensus 229 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 284 (327)
T 3aln_A 229 YPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284 (327)
T ss_dssp SSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred CCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHH
Confidence 7520 0 01 1799999999999999999875
No 243
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.75 E-value=7.9e-19 Score=192.15 Aligned_cols=103 Identities=22% Similarity=0.277 Sum_probs=83.4
Q ss_pred cccccceEecCC-ccEEEeecCCccccCCCCCcceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLNED-FDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~-~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++.+ +.+||+|||+++....... .....++.+|+|||...+ ..++.++||||+||++|||++|+.||.
T Consensus 181 Dlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~ 258 (420)
T 1j1b_A 181 DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 258 (420)
T ss_dssp CCSGGGEEEETTTTEEEECCCTTCEECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCChhhEEEeCCCCeEEeccchhhhhcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCC
Confidence 999999999955 6789999999987643222 234567899999998755 478999999999999999999999985
Q ss_pred CC----------------------------------------cc--------h--HHHHhhcccCCCCCCCCccccC
Q 046589 703 PK----------------------------------------FE--------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~----------------------------------------~~--------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. |. . .+++.+|+..+|++|||++|++
T Consensus 259 ~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l 335 (420)
T 1j1b_A 259 GDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 335 (420)
T ss_dssp CSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHh
Confidence 31 10 1 1799999999999999998863
No 244
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.75 E-value=5.7e-19 Score=183.22 Aligned_cols=105 Identities=30% Similarity=0.503 Sum_probs=76.4
Q ss_pred cccccceEecCCccEEEeecCCccccCCCC-CcceecccccccccCccccC---CCCCCchhhHHHHHHHHHHHHhCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCK-SHISTDVASAISYVPPEYGR---ARKANERDNIYRFGVVLLELVIRKQP 700 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~-~~~~~~~~~~~~y~ape~~~---~~~~~~~~Dv~s~G~vl~el~tg~~p 700 (729)
|+||+||+++.++.+|++|||+++...... ........++..|+|||... ...++.++||||+||++|||+||+.|
T Consensus 145 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p 224 (289)
T 3og7_A 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224 (289)
T ss_dssp CCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCT
T ss_pred cCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCC
Confidence 999999999999999999999997654211 12223456889999999765 56778899999999999999999999
Q ss_pred CCCCcc-------------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 701 TGPKFE-------------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 701 ~~~~~~-------------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+..... + .+++..|++.+|++|||+++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell 280 (289)
T 3og7_A 225 YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280 (289)
T ss_dssp TSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred ccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 852100 1 1799999999999999999873
No 245
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.75 E-value=2.7e-19 Score=193.19 Aligned_cols=100 Identities=13% Similarity=0.126 Sum_probs=82.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCC-----------CCCchhhHHHHHHHHHH
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRAR-----------KANERDNIYRFGVVLLE 693 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~-----------~~~~~~Dv~s~G~vl~e 693 (729)
|+||+||+++.++.+||+|||+++.... ......+ .+|+|||..... .++.++|||||||++||
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~e 305 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW 305 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHH
T ss_pred CCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHH
Confidence 9999999999999999999999986321 2334556 899999987766 78999999999999999
Q ss_pred HHhCCCCCCCC---------------cchH--HHHhhcccCCCCCCCCccccC
Q 046589 694 LVIRKQPTGPK---------------FEDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 694 l~tg~~p~~~~---------------~~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|+||+.|+... +.+. +++..|++.+|++|||+++++
T Consensus 306 lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l 358 (377)
T 3byv_A 306 IWCADLPITKDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAM 358 (377)
T ss_dssp HHHSSCCC------CCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHH
T ss_pred HHHCCCCCcccccccchhhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHh
Confidence 99999998631 1111 899999999999999999874
No 246
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.75 E-value=8.5e-19 Score=183.82 Aligned_cols=104 Identities=25% Similarity=0.323 Sum_probs=74.9
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++.+|++|||+++..............++..|+|||......++.++|||||||++|||+||+.|+...
T Consensus 159 dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 238 (309)
T 2h34_A 159 DVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD 238 (309)
T ss_dssp CCCGGGEEECTTSCEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSC
T ss_pred CCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCc
Confidence 99999999999999999999998875532222223456788999999988888899999999999999999999998631
Q ss_pred c----------------------ch--HHHHhhcccCCCCCCC-Ccccc
Q 046589 705 F----------------------ED--KDIVVGCVSDNPIAKP-GMLRV 728 (729)
Q Consensus 705 ~----------------------~~--~~l~~~c~~~~p~~Rp-~~~~v 728 (729)
- .. .+++.+|+..+|++|| +++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l 287 (309)
T 2h34_A 239 QLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDL 287 (309)
T ss_dssp HHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHH
T ss_pred hHHHHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHH
Confidence 0 01 1799999999999999 88775
No 247
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.75 E-value=1e-18 Score=187.65 Aligned_cols=103 Identities=21% Similarity=0.395 Sum_probs=84.3
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccC------CCCCCchhhHHHHHHHHHHHHhCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGR------ARKANERDNIYRFGVVLLELVIRK 698 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~------~~~~~~~~Dv~s~G~vl~el~tg~ 698 (729)
|+||.||+++.++.++++|||++....... ......++.+|+|||+.. ...++.++||||+||++|||+||+
T Consensus 225 Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~ 302 (365)
T 2y7j_A 225 DLKPENILLDDNMQIRLSDFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGS 302 (365)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred CCCHHHEEECCCCCEEEEecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCC
Confidence 999999999999999999999998765322 223457889999999764 235788999999999999999999
Q ss_pred CCCCCC---------------cc----------hHHHHhhcccCCCCCCCCccccC
Q 046589 699 QPTGPK---------------FE----------DKDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 699 ~p~~~~---------------~~----------~~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.|+... +. -.+++.+|++.+|++|||+++++
T Consensus 303 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell 358 (365)
T 2y7j_A 303 PPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQAL 358 (365)
T ss_dssp CSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred CCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence 998521 00 11799999999999999999874
No 248
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.75 E-value=4.9e-19 Score=183.42 Aligned_cols=137 Identities=29% Similarity=0.507 Sum_probs=113.3
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
+++.....+|+|+||.||+|... ++..||||.
T Consensus 13 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 92 (288)
T 3kfa_A 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 92 (288)
T ss_dssp GGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred cceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCC
Confidence 45667778999999999999986 578899985
Q ss_pred -------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceecc
Q 046589 625 -------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDV 661 (729)
Q Consensus 625 -------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~ 661 (729)
|+||+||+++.++.++++|||+++.............
T Consensus 93 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 172 (288)
T 3kfa_A 93 YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172 (288)
T ss_dssp TEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTE
T ss_pred CCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCC
Confidence 9999999999999999999999987654332223345
Q ss_pred cccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCC-Ccc-------------------hH--HHHhhcccCC
Q 046589 662 ASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTGP-KFE-------------------DK--DIVVGCVSDN 718 (729)
Q Consensus 662 ~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~-~~~-------------------~~--~l~~~c~~~~ 718 (729)
.++..|+|||......++.++||||+||++|||++ |+.|+.. ... +. +++..|+..+
T Consensus 173 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 252 (288)
T 3kfa_A 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 252 (288)
T ss_dssp EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred ccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCC
Confidence 56778999998877888999999999999999999 8888752 110 11 7999999999
Q ss_pred CCCCCCccccC
Q 046589 719 PIAKPGMLRVQ 729 (729)
Q Consensus 719 p~~Rp~~~~v~ 729 (729)
|++|||+++++
T Consensus 253 p~~Rps~~~~~ 263 (288)
T 3kfa_A 253 PSDRPSFAEIH 263 (288)
T ss_dssp GGGSCCHHHHH
T ss_pred hhhCcCHHHHH
Confidence 99999999863
No 249
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.75 E-value=4.8e-19 Score=186.89 Aligned_cols=104 Identities=23% Similarity=0.385 Sum_probs=77.5
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc-ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH-ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++........ ......++..|+|||......++.++||||+||++|||+| |+.|+.
T Consensus 162 Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~ 241 (323)
T 3qup_A 162 DLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYA 241 (323)
T ss_dssp CCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred CCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 99999999999999999999999875432211 1223455678999998877888999999999999999999 888876
Q ss_pred CCcc--------------------hH--HHHhhcccCCCCCCCCcccc
Q 046589 703 PKFE--------------------DK--DIVVGCVSDNPIAKPGMLRV 728 (729)
Q Consensus 703 ~~~~--------------------~~--~l~~~c~~~~p~~Rp~~~~v 728 (729)
..-. +. +++.+|++.+|++|||+.++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 289 (323)
T 3qup_A 242 GIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCL 289 (323)
T ss_dssp TCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred ccChHHHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 3100 11 79999999999999998776
No 250
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.75 E-value=7.4e-19 Score=188.41 Aligned_cols=135 Identities=19% Similarity=0.330 Sum_probs=102.7
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
+.|.....+|+|+||+||+|+.. +|+.||||.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 99 (361)
T 3uc3_A 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYAS 99 (361)
T ss_dssp TTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred CcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCC
Confidence 46777788999999999999985 888999995
Q ss_pred -----------------------------------------cccccceEecCCcc--EEEeecCCccccCCCCCcceecc
Q 046589 625 -----------------------------------------DIKASNILLNEDFD--AKVLDFGLARLISDCKSHISTDV 661 (729)
Q Consensus 625 -----------------------------------------dlk~~nill~~~~~--~kl~dfgl~~~~~~~~~~~~~~~ 661 (729)
|+||+||+++.++. +|++|||+++..... ......
T Consensus 100 ~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~ 177 (361)
T 3uc3_A 100 GGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH--SQPKST 177 (361)
T ss_dssp SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------------
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc--CCCCCC
Confidence 99999999987665 999999999753321 112345
Q ss_pred cccccccCccccCCCCCCch-hhHHHHHHHHHHHHhCCCCCCCC-----c--------------------chH--HHHhh
Q 046589 662 ASAISYVPPEYGRARKANER-DNIYRFGVVLLELVIRKQPTGPK-----F--------------------EDK--DIVVG 713 (729)
Q Consensus 662 ~~~~~y~ape~~~~~~~~~~-~Dv~s~G~vl~el~tg~~p~~~~-----~--------------------~~~--~l~~~ 713 (729)
.+|.+|+|||......+..+ +||||+||++|||+||+.|+... + .+. +++.+
T Consensus 178 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~ 257 (361)
T 3uc3_A 178 VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISR 257 (361)
T ss_dssp ---CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHH
T ss_pred cCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHH
Confidence 68899999998776666655 89999999999999999998631 0 011 79999
Q ss_pred cccCCCCCCCCccccC
Q 046589 714 CVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 714 c~~~~p~~Rp~~~~v~ 729 (729)
|+..+|++|||++|++
T Consensus 258 ~L~~dP~~Rps~~ell 273 (361)
T 3uc3_A 258 IFVADPATRISIPEIK 273 (361)
T ss_dssp HSCSCTTTSCCHHHHH
T ss_pred HccCChhHCcCHHHHH
Confidence 9999999999999863
No 251
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.75 E-value=9.3e-19 Score=183.33 Aligned_cols=101 Identities=25% Similarity=0.457 Sum_probs=78.2
Q ss_pred cccccceEecCCcc-EEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFD-AKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~-~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++. +|++|||+++..... .....++..|+|||......++.++|||||||++|||+||+.|+..
T Consensus 130 dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 205 (307)
T 2eva_A 130 DLKPPNLLLVAGGTVLKICDFGTACDIQTH----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 205 (307)
T ss_dssp CCSGGGEEEETTTTEEEECCCCC----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTT
T ss_pred CCChhHEEEeCCCCEEEEcccccccccccc----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchh
Confidence 99999999988775 899999998764321 2234678899999998888899999999999999999999999863
Q ss_pred C-cc---------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 704 K-FE---------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~-~~---------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. .. + .+++.+|++.+|++|||+++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 255 (307)
T 2eva_A 206 IGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIV 255 (307)
T ss_dssp TCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred hCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHH
Confidence 1 00 0 1799999999999999999873
No 252
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.75 E-value=1.1e-18 Score=183.32 Aligned_cols=136 Identities=21% Similarity=0.425 Sum_probs=106.1
Q ss_pred cccccccCCCCCCcceEEEeecCCCCceeeec------------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMPDGKTVAVKK------------------------------------------------ 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~~~~~~avk~------------------------------------------------ 624 (729)
+.|.....+|+|+||.||+|...+++.||||.
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 107 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 107 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence 45677788999999999999998899999995
Q ss_pred --------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCc-cee
Q 046589 625 --------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSH-IST 659 (729)
Q Consensus 625 --------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~-~~~ 659 (729)
|+||+||++++ +.+|++|||+++........ ...
T Consensus 108 e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~ 186 (313)
T 3cek_A 108 ECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKD 186 (313)
T ss_dssp CCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TEEEECCCSSSCC-----------
T ss_pred ecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-CeEEEeeccccccccCcccccccc
Confidence 99999999964 88999999999876432221 122
Q ss_pred cccccccccCccccCC-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCcc----------------------
Q 046589 660 DVASAISYVPPEYGRA-----------RKANERDNIYRFGVVLLELVIRKQPTGPKFE---------------------- 706 (729)
Q Consensus 660 ~~~~~~~y~ape~~~~-----------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~---------------------- 706 (729)
...++.+|+|||.... ..++.++|||||||++|||+||+.|+.....
T Consensus 187 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (313)
T 3cek_A 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE 266 (313)
T ss_dssp ---CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSC
T ss_pred CCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccch
Confidence 3467899999997654 4678899999999999999999999763100
Q ss_pred h--HHHHhhcccCCCCCCCCccccC
Q 046589 707 D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 707 ~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+ .+++..|++.+|++||+++|++
T Consensus 267 ~~l~~li~~~l~~dp~~Rps~~ell 291 (313)
T 3cek_A 267 KDLQDVLKCCLKRDPKQRISIPELL 291 (313)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred HHHHHHHHHHccCCcccCcCHHHHh
Confidence 0 1799999999999999999874
No 253
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.75 E-value=2.5e-19 Score=202.13 Aligned_cols=137 Identities=30% Similarity=0.515 Sum_probs=111.8
Q ss_pred cccccccCCCCCCcceEEEeecCCCCceeeec------------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMPDGKTVAVKK------------------------------------------------ 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~~~~~~avk~------------------------------------------------ 624 (729)
+.+.....||+|+||.||+|.+.++..||||.
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~~~g 346 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKG 346 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTE
T ss_pred hhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeehhcCC
Confidence 45566678999999999999998888899996
Q ss_pred -----------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceecccc
Q 046589 625 -----------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVAS 663 (729)
Q Consensus 625 -----------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~ 663 (729)
|||++||+++.++.+||+|||+++..............+
T Consensus 347 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~ 426 (535)
T 2h8h_A 347 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 426 (535)
T ss_dssp EHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTS
T ss_pred cHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcC
Confidence 999999999999999999999998754211111123455
Q ss_pred cccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcc--------------------h--HHHHhhcccCCCC
Q 046589 664 AISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTGPKFE--------------------D--KDIVVGCVSDNPI 720 (729)
Q Consensus 664 ~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~--------------------~--~~l~~~c~~~~p~ 720 (729)
+..|+|||......++.++|||||||++|||+| |+.|+..... + .+++..||..+|+
T Consensus 427 ~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 506 (535)
T 2h8h_A 427 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPE 506 (535)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred cccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChh
Confidence 678999998877889999999999999999999 8888753110 1 1799999999999
Q ss_pred CCCCccccC
Q 046589 721 AKPGMLRVQ 729 (729)
Q Consensus 721 ~Rp~~~~v~ 729 (729)
+||||++|+
T Consensus 507 ~RPt~~~l~ 515 (535)
T 2h8h_A 507 ERPTFEYLQ 515 (535)
T ss_dssp GSCCHHHHH
T ss_pred HCcCHHHHH
Confidence 999999863
No 254
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.75 E-value=1.2e-18 Score=179.23 Aligned_cols=105 Identities=25% Similarity=0.432 Sum_probs=84.5
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCC-cceecccccccccCccccCCCCC-CchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKS-HISTDVASAISYVPPEYGRARKA-NERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~-~~~~~~~~~~~y~ape~~~~~~~-~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++.++.+|++|||++........ .......++..|+|||......+ +.++||||+||++|||+||+.|+.
T Consensus 130 dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 209 (276)
T 2yex_A 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209 (276)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCS
T ss_pred CCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999976542211 11234567889999998876554 778999999999999999999986
Q ss_pred CCcc----------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 703 PKFE----------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~~~----------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
..-. . .+++..|++.+|++|||+++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 260 (276)
T 2yex_A 210 QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIK 260 (276)
T ss_dssp CSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHT
T ss_pred CCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHh
Confidence 3100 0 1799999999999999999875
No 255
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.75 E-value=5.3e-19 Score=181.49 Aligned_cols=102 Identities=27% Similarity=0.461 Sum_probs=78.1
Q ss_pred cccccceEecC--------CccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh
Q 046589 625 DIKASNILLNE--------DFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI 696 (729)
Q Consensus 625 dlk~~nill~~--------~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t 696 (729)
|+||+||+++. ++.+|++|||+++...... .....++..|+|||...+..++.++||||+||++||++|
T Consensus 133 dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~ 209 (271)
T 3dtc_A 133 DLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT 209 (271)
T ss_dssp CCSGGGEEESSCCSSSCCSSCCEEECCCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHH
T ss_pred CCchHHEEEecccccccccCcceEEccCCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHh
Confidence 99999999986 6789999999998654321 223467889999998877888999999999999999999
Q ss_pred CCCCCCCCc---------------------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 697 RKQPTGPKF---------------------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 697 g~~p~~~~~---------------------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|+.|+...- .+ .+++.+|++.+|++|||++|++
T Consensus 210 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l 265 (271)
T 3dtc_A 210 GEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNIL 265 (271)
T ss_dssp CCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence 999986310 01 1799999999999999999873
No 256
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.75 E-value=1.2e-18 Score=189.88 Aligned_cols=78 Identities=27% Similarity=0.346 Sum_probs=58.9
Q ss_pred cccccceEe----cCCccEEEeecCCccccCCCCC--cceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhC
Q 046589 625 DIKASNILL----NEDFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIR 697 (729)
Q Consensus 625 dlk~~nill----~~~~~~kl~dfgl~~~~~~~~~--~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg 697 (729)
|+||+||++ +.++.+||+|||+|+....... .......+|.+|+|||...+ ..++.++||||+||++|||+||
T Consensus 153 Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g 232 (405)
T 3rgf_A 153 DLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232 (405)
T ss_dssp CCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHS
T ss_pred CcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhC
Confidence 999999999 6778999999999987643211 11234578899999998765 4589999999999999999999
Q ss_pred CCCCC
Q 046589 698 KQPTG 702 (729)
Q Consensus 698 ~~p~~ 702 (729)
+.|+.
T Consensus 233 ~~pf~ 237 (405)
T 3rgf_A 233 EPIFH 237 (405)
T ss_dssp SCTTC
T ss_pred CCCCC
Confidence 99984
No 257
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.75 E-value=1.4e-17 Score=165.27 Aligned_cols=154 Identities=21% Similarity=0.280 Sum_probs=138.3
Q ss_pred CcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccC
Q 046589 131 LRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSG 210 (729)
Q Consensus 131 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 210 (729)
-+.++++++.++.++. .+. ++|+.|+|++|+|++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~~iP~-~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 13 NNIVDCRGKGLTEIPT-NLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TTEEECTTSCCSSCCS-SCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CCEEEcCCCCcCcCCC-ccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 3689999999988654 332 6899999999999987788999999999999999999998899999999999999999
Q ss_pred CCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeeccccccccc
Q 046589 211 NGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTG 288 (729)
Q Consensus 211 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~ 288 (729)
|.++...+..|..+++|++|+|++|.++ .++...|..+++|++|+|++|.+++..+..+..+++|+.+++++|.+..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCC-EeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 9999666667899999999999999998 4555789999999999999999998888889999999999999998864
No 258
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.75 E-value=1e-18 Score=183.28 Aligned_cols=104 Identities=24% Similarity=0.416 Sum_probs=76.2
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC-
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGP- 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~- 703 (729)
|+||+||+++.++.+|++|||+++...... .......++..|+|||......++.++|||||||++|||+||+.|+..
T Consensus 161 dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 239 (310)
T 2wqm_A 161 DIKPANVFITATGVVKLGDLGLGRFFSSKT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239 (310)
T ss_dssp CCCGGGEEECTTSCEEECCC-------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred CCcHHHEEEcCCCCEEEEeccceeeecCCC-ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 999999999999999999999988754321 112234678899999988888899999999999999999999999853
Q ss_pred Cc----------------------chH--HHHhhcccCCCCCCCCccccC
Q 046589 704 KF----------------------EDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~~----------------------~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. .+. +++..|+..+|++|||+++|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il 289 (310)
T 2wqm_A 240 KMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVY 289 (310)
T ss_dssp -CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred chhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence 11 011 799999999999999999873
No 259
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.75 E-value=6.7e-19 Score=185.58 Aligned_cols=102 Identities=26% Similarity=0.530 Sum_probs=83.4
Q ss_pred cccccceEec-CCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCC-CchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLN-EDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKA-NERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~-~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~-~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++ .++.+|++|||+++..... ......++..|+|||......+ +.++|||||||++|||+||+.|+.
T Consensus 174 Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 250 (320)
T 3a99_A 174 DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 250 (320)
T ss_dssp CCSGGGEEEETTTTEEEECCCTTCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CCCHHHEEEeCCCCCEEEeeCccccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCC
Confidence 9999999999 7799999999999876532 1234567889999997765554 678999999999999999999986
Q ss_pred CC-------------cch--HHHHhhcccCCCCCCCCccccC
Q 046589 703 PK-------------FED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~-------------~~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. +.+ .+++.+||+.+|++|||+++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll 292 (320)
T 3a99_A 251 HDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQ 292 (320)
T ss_dssp SHHHHHHCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred ChhhhhcccccccccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 21 111 1899999999999999999873
No 260
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.75 E-value=1.2e-18 Score=190.63 Aligned_cols=103 Identities=21% Similarity=0.344 Sum_probs=77.2
Q ss_pred cccccceEecCC---ccEEEeecCCccccCCCCCcceecccccccccCccccC---CCCCCchhhHHHHHHHHHHHHhCC
Q 046589 625 DIKASNILLNED---FDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGR---ARKANERDNIYRFGVVLLELVIRK 698 (729)
Q Consensus 625 dlk~~nill~~~---~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~---~~~~~~~~Dv~s~G~vl~el~tg~ 698 (729)
|+||+||+++.+ ..+|++|||+++.... ........+|.+|+|||... ...++.++||||+||++|||+||+
T Consensus 264 Dlkp~NIll~~~~~~~~~kl~DFG~a~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~ 341 (419)
T 3i6u_A 264 DLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 341 (419)
T ss_dssp CCCGGGEEESSSSSSCCEEECCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSS
T ss_pred CCChHhEEEecCCCcceEEEeecccceecCC--CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCC
Confidence 999999999744 4699999999987643 22233467889999999864 366788999999999999999999
Q ss_pred CCCCCC----------------cch----------HHHHhhcccCCCCCCCCccccC
Q 046589 699 QPTGPK----------------FED----------KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 699 ~p~~~~----------------~~~----------~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.|+... +.. .+++.+|++.+|++|||++|++
T Consensus 342 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l 398 (419)
T 3i6u_A 342 PPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 398 (419)
T ss_dssp CSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred CCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHh
Confidence 998621 000 0799999999999999999863
No 261
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.75 E-value=1.2e-18 Score=184.76 Aligned_cols=105 Identities=24% Similarity=0.325 Sum_probs=71.7
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcc-----------eecccccccccCcccc---CCCCCCchhhHHHHHHH
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHI-----------STDVASAISYVPPEYG---RARKANERDNIYRFGVV 690 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~-----------~~~~~~~~~y~ape~~---~~~~~~~~~Dv~s~G~v 690 (729)
|+||+||+++.++.+||+|||+++......... .....++..|+|||.. ....++.++|||||||+
T Consensus 163 Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~i 242 (337)
T 3ll6_A 163 DLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCI 242 (337)
T ss_dssp CCCGGGCEECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHH
T ss_pred cCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHH
Confidence 999999999999999999999998765322111 1134578899999987 45678899999999999
Q ss_pred HHHHHhCCCCCCCCc-----------c--------hHHHHhhcccCCCCCCCCccccC
Q 046589 691 LLELVIRKQPTGPKF-----------E--------DKDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 691 l~el~tg~~p~~~~~-----------~--------~~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+|||+||+.|+...- . -.+++..|++.+|++|||++|++
T Consensus 243 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l 300 (337)
T 3ll6_A 243 LYLLCFRQHPFEDGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVV 300 (337)
T ss_dssp HHHHHHSSCCC------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHH
T ss_pred HHHHHhCCCCCcchhHHHhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHH
Confidence 999999999976210 0 11899999999999999999873
No 262
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.74 E-value=1.2e-18 Score=187.25 Aligned_cols=105 Identities=27% Similarity=0.381 Sum_probs=84.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc--ceecccccccccCccccC-CCCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH--ISTDVASAISYVPPEYGR-ARKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~--~~~~~~~~~~y~ape~~~-~~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++.++.+|++|||+++........ ......+|.+|+|||... ...++.++||||+||++|||+||+.|+
T Consensus 153 Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 232 (364)
T 3qyz_A 153 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232 (364)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSS
T ss_pred CCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999999999876532211 123457889999999754 455899999999999999999999998
Q ss_pred CCCc--------------------------------------------------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 702 GPKF--------------------------------------------------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~~--------------------------------------------------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
...- .. .+++.+|+..+|++|||++|++
T Consensus 233 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 312 (364)
T 3qyz_A 233 PGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312 (364)
T ss_dssp CCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 5310 00 1799999999999999999873
No 263
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.74 E-value=5.6e-19 Score=190.03 Aligned_cols=105 Identities=30% Similarity=0.507 Sum_probs=74.4
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCC---cceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhC-CCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKS---HISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIR-KQP 700 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~---~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg-~~p 700 (729)
|+||+||+++.++.+|++|||+++....... .......++..|+|||......++.++|||||||++|||+|| ..|
T Consensus 217 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p 296 (373)
T 3c1x_A 217 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 296 (373)
T ss_dssp CCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred ccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCC
Confidence 9999999999999999999999986543211 112234567789999988888899999999999999999995 444
Q ss_pred CCCC--c------------------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 701 TGPK--F------------------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 701 ~~~~--~------------------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+... . .. .+++..||..+|++|||+++++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell 347 (373)
T 3c1x_A 297 YPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 347 (373)
T ss_dssp CTTSCSSCHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 4310 0 00 1799999999999999999873
No 264
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.74 E-value=1.1e-18 Score=181.62 Aligned_cols=105 Identities=28% Similarity=0.492 Sum_probs=84.2
Q ss_pred cccccceEecCCccEEEeecCCccccCCCC---CcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCK---SHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~---~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++.++.+|++|||+++...... ........++..|+|||......++.++||||+||++|||+||+.|+
T Consensus 149 dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~ 228 (298)
T 3pls_A 149 DLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP 228 (298)
T ss_dssp CCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCT
T ss_pred CCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCC
Confidence 999999999999999999999998654211 11122346678899999988888999999999999999999977775
Q ss_pred CCCcc---------------------hH--HHHhhcccCCCCCCCCccccC
Q 046589 702 GPKFE---------------------DK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~~~---------------------~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
..... +. +++..|++.+|.+|||+++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll 279 (298)
T 3pls_A 229 YRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLV 279 (298)
T ss_dssp TTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CccCCHHHHHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHH
Confidence 42111 11 799999999999999999863
No 265
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.74 E-value=1.5e-18 Score=186.86 Aligned_cols=101 Identities=25% Similarity=0.294 Sum_probs=81.1
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++.... ......++.+|+|||.... ..++.++||||+||++|||+||+.|+..
T Consensus 169 Dikp~NIll~~~~~~kL~Dfg~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 244 (371)
T 4exu_A 169 DLKPGNLAVNEDCELKILDFGLARHADA----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 244 (371)
T ss_dssp CCCGGGEEECTTCCEEECSTTCC------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CcCHHHeEECCCCCEEEEecCccccccc----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999986542 1234567899999998765 6789999999999999999999999863
Q ss_pred Cc--------------------------------------------------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 704 KF--------------------------------------------------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~~--------------------------------------------------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.- .+ .+++..|++.+|++|||++|++
T Consensus 245 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 322 (371)
T 4exu_A 245 KDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQAL 322 (371)
T ss_dssp SSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred CChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHh
Confidence 10 01 1799999999999999999863
No 266
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.74 E-value=8.5e-19 Score=196.89 Aligned_cols=134 Identities=24% Similarity=0.432 Sum_probs=113.6
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
++|.....||.|+||.||+|+.. +|+.||||.
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 263 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence 56777788999999999999985 889999995
Q ss_pred -----------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcc
Q 046589 625 -----------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHI 657 (729)
Q Consensus 625 -----------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~ 657 (729)
|+||+||+++.++++||+|||+++...... .
T Consensus 264 Ey~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~--~ 341 (576)
T 2acx_A 264 TLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--T 341 (576)
T ss_dssp CCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC--C
T ss_pred EcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCc--c
Confidence 999999999999999999999998765322 2
Q ss_pred eecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc---c--------------------h--HHHHh
Q 046589 658 STDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPKF---E--------------------D--KDIVV 712 (729)
Q Consensus 658 ~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~---~--------------------~--~~l~~ 712 (729)
.....||.+|+|||......++.++||||+||++|||+||+.|+...- . . .+++.
T Consensus 342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~~~dLI~ 421 (576)
T 2acx_A 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCS 421 (576)
T ss_dssp EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCCccCCHHHHHHHH
Confidence 334578999999999888888999999999999999999999987410 0 0 17999
Q ss_pred hcccCCCCCCC-----Ccccc
Q 046589 713 GCVSDNPIAKP-----GMLRV 728 (729)
Q Consensus 713 ~c~~~~p~~Rp-----~~~~v 728 (729)
+|+..+|++|| +++||
T Consensus 422 ~lL~~dP~~R~g~~~~sa~ei 442 (576)
T 2acx_A 422 QLLCKDPAERLGCRGGSAREV 442 (576)
T ss_dssp HHTCSSGGGSTTCSSSHHHHH
T ss_pred HhccCCHHHcCCCCCCCHHHH
Confidence 99999999999 55654
No 267
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.74 E-value=2e-18 Score=181.53 Aligned_cols=103 Identities=28% Similarity=0.479 Sum_probs=76.3
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccC-----CCCCCchhhHHHHHHHHHHHHhCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGR-----ARKANERDNIYRFGVVLLELVIRKQ 699 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~-----~~~~~~~~Dv~s~G~vl~el~tg~~ 699 (729)
|+||+||+++.++.+|++|||+++...... ......++..|+|||... ...++.++|||||||++|||+||+.
T Consensus 150 dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~ 227 (318)
T 2dyl_A 150 DVKPSNILLDERGQIKLCDFGISGRLVDDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQF 227 (318)
T ss_dssp CCCGGGEEECTTSCEEECCCTTC----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCCHHHEEECCCCCEEEEECCCchhccCCc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCC
Confidence 999999999999999999999997654321 122446788999999873 4567889999999999999999999
Q ss_pred CCCC-C----------------------cch--HHHHhhcccCCCCCCCCccccC
Q 046589 700 PTGP-K----------------------FED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 700 p~~~-~----------------------~~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|+.. . +.. .+++..|++.+|++||++++++
T Consensus 228 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll 282 (318)
T 2dyl_A 228 PYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLL 282 (318)
T ss_dssp TTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHT
T ss_pred CCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence 9863 1 011 1799999999999999999875
No 268
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.74 E-value=8.4e-19 Score=186.00 Aligned_cols=105 Identities=26% Similarity=0.469 Sum_probs=79.5
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcc---eecccccccccCccccCCCCCCch------hhHHHHHHHHHHHH
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHI---STDVASAISYVPPEYGRARKANER------DNIYRFGVVLLELV 695 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~---~~~~~~~~~y~ape~~~~~~~~~~------~Dv~s~G~vl~el~ 695 (729)
|+||+||+++.++.+|++|||+++......... .....++.+|+|||.........+ +|||||||++|||+
T Consensus 167 Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~ 246 (337)
T 3mdy_A 167 DLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246 (337)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHH
Confidence 899999999999999999999997754322211 123468899999998766555444 99999999999999
Q ss_pred hC----------CCCCCCC----------------------cc----h-------HHHHhhcccCCCCCCCCccccC
Q 046589 696 IR----------KQPTGPK----------------------FE----D-------KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 696 tg----------~~p~~~~----------------------~~----~-------~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|| +.|+... +. . .+++..||+.+|++|||+++|+
T Consensus 247 tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell 323 (337)
T 3mdy_A 247 RRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVK 323 (337)
T ss_dssp TTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred hccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHH
Confidence 99 5554310 00 0 0699999999999999999873
No 269
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.74 E-value=1.3e-18 Score=186.79 Aligned_cols=101 Identities=26% Similarity=0.318 Sum_probs=75.1
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++.... ......+|.+|+|||...+ ..++.++||||+||++|||+||+.|+..
T Consensus 157 Dlkp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 232 (367)
T 2fst_X 157 DLKPSNLAVNEDCELKILDFGLARHTAD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232 (367)
T ss_dssp CCCGGGEEECTTCCEEECC-------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCCHhhEEECCCCCEEEeeccccccccc----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999987542 1234577899999998765 6789999999999999999999999853
Q ss_pred Cc--------------------------------------------------c--hHHHHhhcccCCCCCCCCccccC
Q 046589 704 KF--------------------------------------------------E--DKDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~~--------------------------------------------------~--~~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.- . ..+++.+|+..+|++|||+++++
T Consensus 233 ~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L 310 (367)
T 2fst_X 233 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310 (367)
T ss_dssp SSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHh
Confidence 10 0 01689999999999999998863
No 270
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.74 E-value=2e-18 Score=183.06 Aligned_cols=74 Identities=27% Similarity=0.365 Sum_probs=64.0
Q ss_pred cccccceEecC-------------------CccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHH
Q 046589 625 DIKASNILLNE-------------------DFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIY 685 (729)
Q Consensus 625 dlk~~nill~~-------------------~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~ 685 (729)
|+||+||+++. ++.+|++|||+++..... .....++.+|+|||......++.++|||
T Consensus 143 Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~ 218 (339)
T 1z57_A 143 DLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVW 218 (339)
T ss_dssp CCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHH
T ss_pred CCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhH
Confidence 99999999987 667999999999874421 2345678999999998888899999999
Q ss_pred HHHHHHHHHHhCCCCCC
Q 046589 686 RFGVVLLELVIRKQPTG 702 (729)
Q Consensus 686 s~G~vl~el~tg~~p~~ 702 (729)
|+||++|||+||+.|+.
T Consensus 219 slG~il~el~~g~~pf~ 235 (339)
T 1z57_A 219 SIGCILIEYYLGFTVFP 235 (339)
T ss_dssp HHHHHHHHHHHSSCSCC
T ss_pred HHHHHHHHHHhCCCCCC
Confidence 99999999999999985
No 271
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.74 E-value=1.5e-18 Score=185.12 Aligned_cols=104 Identities=27% Similarity=0.339 Sum_probs=84.3
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++...... .......++.+|+|||...+ ..++.++||||+||++|||++|+.|+..
T Consensus 137 Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~ 215 (346)
T 1ua2_A 137 DLKPNNLLLDENGVLKLADFGLAKSFGSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPG 215 (346)
T ss_dssp CCCGGGEEECTTCCEEECCCGGGSTTTSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCHHHEEEcCCCCEEEEecccceeccCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 999999999999999999999998764321 22334577899999998754 4578999999999999999999988642
Q ss_pred --------------------Ccc---------------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 704 --------------------KFE---------------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 --------------------~~~---------------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.|. + .+++..|+..+|++|||++|++
T Consensus 216 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 290 (346)
T 1ua2_A 216 DSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQAL 290 (346)
T ss_dssp SSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHH
T ss_pred CCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHh
Confidence 111 0 1699999999999999999873
No 272
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.74 E-value=2e-18 Score=177.80 Aligned_cols=102 Identities=21% Similarity=0.307 Sum_probs=83.8
Q ss_pred cccccceEe---cCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILL---NEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill---~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||++ +.++.++++|||++....... ......++.+|+|||...+ .++.++||||+||++|||+||+.|+
T Consensus 131 dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~ 207 (277)
T 3f3z_A 131 DLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK--MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPF 207 (277)
T ss_dssp CCSGGGEEESSSSTTCCEEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred CCCHHHEEEecCCCCCcEEEEecccceeccCcc--chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCC
Confidence 999999999 788999999999998765322 2234567889999998754 4899999999999999999999998
Q ss_pred CCCcc-----------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 702 GPKFE-----------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~~~-----------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
...-. + .+++..|++.+|++|||+.+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l 260 (277)
T 3f3z_A 208 SAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQAL 260 (277)
T ss_dssp CCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred CCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 63110 0 1799999999999999999875
No 273
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.74 E-value=1.8e-18 Score=178.93 Aligned_cols=102 Identities=23% Similarity=0.396 Sum_probs=85.5
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++.+|++|||++...... ......++..|+|||......++.++||||+||++|||++|+.|+...
T Consensus 139 dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 215 (284)
T 2vgo_A 139 DIKPENLLMGYKGELKIADFGWSVHAPSL---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP 215 (284)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCEECSSS---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred CCCHHHEEEcCCCCEEEecccccccCccc---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCC
Confidence 99999999999999999999998765421 122456788999999988888899999999999999999999998631
Q ss_pred c-------------------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 705 F-------------------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 705 ~-------------------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
- .. .+++..|+..+|++|||+++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll 261 (284)
T 2vgo_A 216 SHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVM 261 (284)
T ss_dssp SHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred CHhHHHHHHhccccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHh
Confidence 0 01 1799999999999999999863
No 274
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.74 E-value=1.9e-17 Score=164.38 Aligned_cols=155 Identities=18% Similarity=0.204 Sum_probs=138.5
Q ss_pred CcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCC-ccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEcc
Q 046589 131 LRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLP-SQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFS 209 (729)
Q Consensus 131 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 209 (729)
-+++++++|.++.++. .+ ...+++|+|++|+|++..| ..|..+++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 13 ~~~l~~s~n~l~~iP~-~~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 13 GTTVDCSNQKLNKIPE-HI--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TTEEECCSSCCSSCCS-CC--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEeEeCCCCcccCcc-CC--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 3689999999988653 33 2467999999999997755 458999999999999999998888899999999999999
Q ss_pred CCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeecccccccccc
Q 046589 210 GNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGS 289 (729)
Q Consensus 210 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~~ 289 (729)
+|.+++..+..|..+++|++|+|++|.+++ ++...|..+++|++|+|++|++++..|..|..+++|+.+++++|.+.+.
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITC-VGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCC-BCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCe-ECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 999998888889999999999999999984 5557889999999999999999998899999999999999999998754
No 275
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.74 E-value=1.2e-18 Score=187.60 Aligned_cols=76 Identities=29% Similarity=0.380 Sum_probs=57.5
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++..... .......++.+|+|||......++.++||||+||++|||+||+.|+.
T Consensus 152 Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 227 (371)
T 2xrw_A 152 DLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 227 (371)
T ss_dssp CCCGGGEEECTTSCEEECCCCC------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCCHHHEEEcCCCCEEEEEeecccccccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999875421 12234577889999999888889999999999999999999999975
No 276
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.74 E-value=8.9e-19 Score=185.40 Aligned_cols=136 Identities=24% Similarity=0.400 Sum_probs=104.8
Q ss_pred cccccccCCCCCCcceEEEeec-CCCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTM-PDGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~-~~~~~~avk~----------------------------------------------- 624 (729)
+.|.....+|+|+||+||+|+. .+|+.||||.
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 113 (329)
T 3gbz_A 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFE 113 (329)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEe
Confidence 4667778899999999999986 4788999995
Q ss_pred -------------------------------------------cccccceEe-----cCCccEEEeecCCccccCCCCCc
Q 046589 625 -------------------------------------------DIKASNILL-----NEDFDAKVLDFGLARLISDCKSH 656 (729)
Q Consensus 625 -------------------------------------------dlk~~nill-----~~~~~~kl~dfgl~~~~~~~~~~ 656 (729)
|+||+||++ +..+.+|++|||+++...... .
T Consensus 114 ~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~-~ 192 (329)
T 3gbz_A 114 YAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI-R 192 (329)
T ss_dssp CCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----
T ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcc-c
Confidence 999999999 455669999999998754321 1
Q ss_pred ceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCC--------------------c----------
Q 046589 657 ISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQPTGPK--------------------F---------- 705 (729)
Q Consensus 657 ~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p~~~~--------------------~---------- 705 (729)
......++.+|+|||.... ..++.++||||+||++|||+||+.|+... |
T Consensus 193 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (329)
T 3gbz_A 193 QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWK 272 (329)
T ss_dssp -------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhh
Confidence 2234567889999998765 45799999999999999999999997521 0
Q ss_pred -------------------chH--HHHhhcccCCCCCCCCccccC
Q 046589 706 -------------------EDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 706 -------------------~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.++ +++.+|++.+|++|||++|++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 317 (329)
T 3gbz_A 273 QSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNAL 317 (329)
T ss_dssp TTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred hhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 001 799999999999999999874
No 277
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.74 E-value=1.9e-18 Score=184.54 Aligned_cols=75 Identities=24% Similarity=0.332 Sum_probs=64.7
Q ss_pred cccccceEe-------------------cCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHH
Q 046589 625 DIKASNILL-------------------NEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIY 685 (729)
Q Consensus 625 dlk~~nill-------------------~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~ 685 (729)
|+||+||++ +.++.+|++|||+++..... .....++.+|+|||......++.++|||
T Consensus 148 Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~ 223 (355)
T 2eu9_A 148 DLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVW 223 (355)
T ss_dssp CCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHH
T ss_pred CCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchH
Confidence 999999999 56789999999999874421 2345678999999998888899999999
Q ss_pred HHHHHHHHHHhCCCCCCC
Q 046589 686 RFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 686 s~G~vl~el~tg~~p~~~ 703 (729)
|+||++|||+||+.|+..
T Consensus 224 slG~il~el~~g~~pf~~ 241 (355)
T 2eu9_A 224 SIGCILFEYYRGFTLFQT 241 (355)
T ss_dssp HHHHHHHHHHHSSCSCCC
T ss_pred HHHHHHHHHHhCCCCCCC
Confidence 999999999999999863
No 278
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.74 E-value=7.9e-19 Score=201.09 Aligned_cols=105 Identities=23% Similarity=0.374 Sum_probs=81.7
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcce--ecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~--~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~ 701 (729)
|+||+||+++.++.+||+|||+++.......... ....++..|+|||......++.++|||||||++|||+| |+.|+
T Consensus 461 Dlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf 540 (613)
T 2ozo_A 461 NLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY 540 (613)
T ss_dssp CCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred cCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 9999999999999999999999987643221111 12344578999998887889999999999999999998 99997
Q ss_pred CCCcc--------------------hH--HHHhhcccCCCCCCCCccccC
Q 046589 702 GPKFE--------------------DK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~~~--------------------~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
...-. +. +++..||..+|++||+|++|+
T Consensus 541 ~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~ 590 (613)
T 2ozo_A 541 KKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVE 590 (613)
T ss_dssp TTCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHH
T ss_pred CCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 63100 11 799999999999999999863
No 279
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.74 E-value=1.1e-18 Score=186.98 Aligned_cols=107 Identities=29% Similarity=0.496 Sum_probs=91.2
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
+.|.....+|.|+||.||+|... +|..||+|.
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 56777788999999999999985 788999985
Q ss_pred --------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceec
Q 046589 625 --------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTD 660 (729)
Q Consensus 625 --------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~ 660 (729)
|+||+||+++.++.+|++|||+++..... ....
T Consensus 113 ~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~ 189 (360)
T 3eqc_A 113 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 189 (360)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---C---
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc---cccC
Confidence 99999999999999999999998764321 1223
Q ss_pred ccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 661 VASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 661 ~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
..++.+|+|||......++.++||||+||++|||+||+.|+.
T Consensus 190 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 231 (360)
T 3eqc_A 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 231 (360)
T ss_dssp -CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSS
T ss_pred CCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 467889999999888889999999999999999999999975
No 280
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.74 E-value=6.3e-19 Score=187.37 Aligned_cols=136 Identities=23% Similarity=0.348 Sum_probs=110.6
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
+.|.....||.|+||.||+|... +|+.||||.
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg 101 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGG 101 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCC
Confidence 45667778999999999999985 788999996
Q ss_pred ---------------------------------------cccccceEecCC----ccEEEeecCCccccCCCCCcceecc
Q 046589 625 ---------------------------------------DIKASNILLNED----FDAKVLDFGLARLISDCKSHISTDV 661 (729)
Q Consensus 625 ---------------------------------------dlk~~nill~~~----~~~kl~dfgl~~~~~~~~~~~~~~~ 661 (729)
|+||+||++..+ +.+|++|||+++...... ......
T Consensus 102 ~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~ 180 (342)
T 2qr7_A 102 ELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN-GLLMTP 180 (342)
T ss_dssp BHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT-CCBCCS
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC-Cceecc
Confidence 999999998432 369999999998765322 222345
Q ss_pred cccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----------------------cc---h--HHHHhh
Q 046589 662 ASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK-----------------------FE---D--KDIVVG 713 (729)
Q Consensus 662 ~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~-----------------------~~---~--~~l~~~ 713 (729)
.+|..|+|||......++.++||||+||++|||++|+.|+... |. + .+++..
T Consensus 181 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ 260 (342)
T 2qr7_A 181 CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSK 260 (342)
T ss_dssp SCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHH
T ss_pred CCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHH
Confidence 7789999999877667888999999999999999999998631 10 1 179999
Q ss_pred cccCCCCCCCCccccC
Q 046589 714 CVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 714 c~~~~p~~Rp~~~~v~ 729 (729)
|+..+|++|||+++++
T Consensus 261 ~L~~dP~~R~t~~~il 276 (342)
T 2qr7_A 261 MLHVDPHQRLTAALVL 276 (342)
T ss_dssp HTCSSTTTSCCHHHHT
T ss_pred HCCCChhHCcCHHHHh
Confidence 9999999999999874
No 281
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.74 E-value=9.3e-19 Score=187.08 Aligned_cols=105 Identities=11% Similarity=0.214 Sum_probs=86.0
Q ss_pred cccccceEecCCc--cEEEeecCCccccCCCCCc------ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh
Q 046589 625 DIKASNILLNEDF--DAKVLDFGLARLISDCKSH------ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI 696 (729)
Q Consensus 625 dlk~~nill~~~~--~~kl~dfgl~~~~~~~~~~------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t 696 (729)
|+||+||+++.++ .+|++|||+++........ ......++..|+|||...+..++.++|||||||++|||+|
T Consensus 184 Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 263 (352)
T 2jii_A 184 NVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLY 263 (352)
T ss_dssp CCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHh
Confidence 9999999999988 9999999999875432111 1123478889999999888889999999999999999999
Q ss_pred CCCCCCCCc------------------------------chH--HHHhhcccCCCCCCCCccccC
Q 046589 697 RKQPTGPKF------------------------------EDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 697 g~~p~~~~~------------------------------~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|+.|+.... .+. +++..|++.+|++|||+++|+
T Consensus 264 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~ 328 (352)
T 2jii_A 264 GFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLR 328 (352)
T ss_dssp SCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHH
T ss_pred CCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHH
Confidence 999986310 111 799999999999999999873
No 282
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.74 E-value=2e-17 Score=171.67 Aligned_cols=170 Identities=28% Similarity=0.304 Sum_probs=143.6
Q ss_pred cCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEE
Q 046589 104 LLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLS 183 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 183 (729)
+.+++.++++++.+.+. + .+..+++|++|++++|++++..+ +.++++|++|+|++|++++ +| .+..+++|++|+
T Consensus 45 l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~ 118 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (291)
T ss_dssp HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred cCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEE
Confidence 45688999999988753 3 47889999999999999988665 8899999999999999974 34 489999999999
Q ss_pred eeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEccccccc
Q 046589 184 LCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLS 263 (729)
Q Consensus 184 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 263 (729)
+++|++++. ..+..+++|++|++++|.+++. ..++.+++|++|++++|.+++ ++. +..+++|++|++++|.++
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~-~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD-IVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCC
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcccc-chh--hcCCCccCEEECCCCcCC
Confidence 999999853 5688999999999999999854 578899999999999999984 442 888999999999999998
Q ss_pred ccCCccccCCCcCCeeccccccccc
Q 046589 264 GNIPPEISHLKKLSDHYLGINQFTG 288 (729)
Q Consensus 264 ~~~p~~l~~l~~L~~l~l~~n~l~~ 288 (729)
+ +| .+..+++|+.++++.|.++.
T Consensus 192 ~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 192 D-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp B-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred C-Ch-hhccCCCCCEEECcCCcccC
Confidence 5 44 48889999999999998864
No 283
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.74 E-value=2.2e-18 Score=177.28 Aligned_cols=103 Identities=23% Similarity=0.450 Sum_probs=77.2
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKA-NERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~-~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.++++|||+++...... ......++..|+|||......+ +.++||||+||++|||++|+.|+..
T Consensus 136 dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 213 (276)
T 2h6d_A 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213 (276)
T ss_dssp CCCGGGEEECTTSCEEECCCCGGGCCCC---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCChhhEEECCCCCEEEeecccccccCCCc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999998754321 1223467889999998876554 6899999999999999999999863
Q ss_pred Ccc-------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 704 KFE-------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~~~-------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... . .+++..|++.+|++|||+++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l 260 (276)
T 2h6d_A 214 EHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIR 260 (276)
T ss_dssp SSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CcHHHHHHHhhcCcccCchhcCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 111 1 1799999999999999999873
No 284
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.74 E-value=1.7e-18 Score=190.28 Aligned_cols=105 Identities=23% Similarity=0.482 Sum_probs=79.2
Q ss_pred cccccceEecCC-------------ccEEEeecCCccccCCCCCc---ceecccccccccCccccCC-------CCCCch
Q 046589 625 DIKASNILLNED-------------FDAKVLDFGLARLISDCKSH---ISTDVASAISYVPPEYGRA-------RKANER 681 (729)
Q Consensus 625 dlk~~nill~~~-------------~~~kl~dfgl~~~~~~~~~~---~~~~~~~~~~y~ape~~~~-------~~~~~~ 681 (729)
|+||+||+++.+ ..+|++|||+++........ ......+|.+|+|||.... ..++.+
T Consensus 140 DLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~ 219 (434)
T 2rio_A 140 DLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRS 219 (434)
T ss_dssp CCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTH
T ss_pred CCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchh
Confidence 999999999754 48999999999876532211 1224578999999997654 568999
Q ss_pred hhHHHHHHHHHHHHh-CCCCCCCCcc------------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 682 DNIYRFGVVLLELVI-RKQPTGPKFE------------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 682 ~Dv~s~G~vl~el~t-g~~p~~~~~~------------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+|||||||++|||+| |+.|+..... . .+++..|++.+|++|||+++|+
T Consensus 220 ~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil 294 (434)
T 2rio_A 220 IDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL 294 (434)
T ss_dssp HHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred hhhHhHHHHHHHHHhCCCCCCCCchhhHHHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHH
Confidence 999999999999999 8888752110 0 1799999999999999999874
No 285
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.74 E-value=1.8e-18 Score=185.59 Aligned_cols=103 Identities=22% Similarity=0.261 Sum_probs=77.4
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++..... .......++.+|+|||.... ..++.++||||+||++|||+||+.|+..
T Consensus 159 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 236 (362)
T 3pg1_A 159 DLHPGNILLADNNDITICDFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236 (362)
T ss_dssp CCCGGGEEECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCChHHEEEcCCCCEEEEecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999764422 12234567889999997765 6789999999999999999999999863
Q ss_pred Cc---------------------------------------------------c--hHHHHhhcccCCCCCCCCccccC
Q 046589 704 KF---------------------------------------------------E--DKDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~~---------------------------------------------------~--~~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. . -.+++..|++.+|++|||++|++
T Consensus 237 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 315 (362)
T 3pg1_A 237 STFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQAL 315 (362)
T ss_dssp SSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHH
Confidence 11 0 01689999999999999999863
No 286
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.74 E-value=2.1e-18 Score=182.03 Aligned_cols=103 Identities=26% Similarity=0.382 Sum_probs=85.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++.+|++|||+++..... .......++.+|+|||......++.++||||+||++|||+||+.|+...
T Consensus 145 dlkp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (326)
T 1blx_A 145 DLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS 222 (326)
T ss_dssp CCCGGGEEECTTCCEEECSCCSCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cCCHHHeEEcCCCCEEEecCcccccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC
Confidence 99999999999999999999999865421 1223456788999999888888999999999999999999999998531
Q ss_pred --------------------cc--------------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 705 --------------------FE--------------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 705 --------------------~~--------------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|. + .+++.+|+..+|++|||+++++
T Consensus 223 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l 295 (326)
T 1blx_A 223 SDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295 (326)
T ss_dssp SHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred CHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 10 0 1789999999999999998863
No 287
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.73 E-value=1.8e-18 Score=183.41 Aligned_cols=105 Identities=25% Similarity=0.455 Sum_probs=78.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcc--eecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHI--STDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~--~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~ 701 (729)
|+||+||+++.++.+|++|||+++......... .....++..|+|||......++.++|||||||++||++| |+.|+
T Consensus 172 Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf 251 (333)
T 1mqb_A 172 DLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY 251 (333)
T ss_dssp CCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred CCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCc
Confidence 999999999999999999999998765322111 112345678999998888889999999999999999999 99987
Q ss_pred CCC--------------------cchH--HHHhhcccCCCCCCCCccccC
Q 046589 702 GPK--------------------FEDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~--------------------~~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... .... +++.+||+.+|++||++++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~ 301 (333)
T 1mqb_A 252 WELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIV 301 (333)
T ss_dssp TTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred ccCCHHHHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 521 0011 799999999999999999863
No 288
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.73 E-value=1.3e-18 Score=182.49 Aligned_cols=105 Identities=25% Similarity=0.418 Sum_probs=85.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcc-eecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHI-STDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~-~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++......... .....++.+|+|||......++.++||||+||++|||+| |+.|+.
T Consensus 170 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 249 (313)
T 1t46_A 170 DLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 249 (313)
T ss_dssp CCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred CCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999998765433221 223456778999998877888999999999999999999 888875
Q ss_pred C-Ccc--------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 703 P-KFE--------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~-~~~--------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. ... + .+++.+|++.+|++|||+++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 299 (313)
T 1t46_A 250 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299 (313)
T ss_dssp TCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred cccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 3 110 0 1799999999999999999873
No 289
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.73 E-value=2.6e-18 Score=180.55 Aligned_cols=105 Identities=22% Similarity=0.293 Sum_probs=78.2
Q ss_pred cccccceEecCCcc---EEEeecCCccccCCCCC------cceecccccccccCccccCC-----CCCCchhhHHHHHHH
Q 046589 625 DIKASNILLNEDFD---AKVLDFGLARLISDCKS------HISTDVASAISYVPPEYGRA-----RKANERDNIYRFGVV 690 (729)
Q Consensus 625 dlk~~nill~~~~~---~kl~dfgl~~~~~~~~~------~~~~~~~~~~~y~ape~~~~-----~~~~~~~Dv~s~G~v 690 (729)
|+||+||+++.++. +|++|||+++....... .......++..|+|||.... ..++.++||||+||+
T Consensus 136 dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~i 215 (316)
T 2ac3_A 136 DLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVI 215 (316)
T ss_dssp CCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHH
T ss_pred CCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHH
Confidence 99999999997765 99999999876542111 11123458899999997653 457889999999999
Q ss_pred HHHHHhCCCCCCCC------cc--------------------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 691 LLELVIRKQPTGPK------FE--------------------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 691 l~el~tg~~p~~~~------~~--------------------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+|||+||+.|+... |. + .+++.+|+..+|++|||++|++
T Consensus 216 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l 294 (316)
T 2ac3_A 216 LYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVL 294 (316)
T ss_dssp HHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred HHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHh
Confidence 99999999998531 10 0 1799999999999999999873
No 290
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.73 E-value=2.3e-18 Score=179.46 Aligned_cols=104 Identities=22% Similarity=0.333 Sum_probs=83.7
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCC-CCchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARK-ANERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~-~~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++...... .......++.+|+|||...+.. ++.++||||+||++|||+||+.|+..
T Consensus 128 dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 206 (299)
T 2r3i_A 128 DLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPG 206 (299)
T ss_dssp CCCGGGEEECTTSCEEECSTTHHHHHCCCS-BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCCHHHeEEcCCCCEEECcchhhhhccCCc-cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999987754221 1122346788999999876544 78999999999999999999999753
Q ss_pred C--------------------c----------------------------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 704 K--------------------F----------------------------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~--------------------~----------------------------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. | .+ .+++.+|++.+|++|||+++++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l 282 (299)
T 2r3i_A 207 DSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282 (299)
T ss_dssp SSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred ccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 1 0 00 1699999999999999999863
No 291
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.73 E-value=3.5e-18 Score=190.91 Aligned_cols=134 Identities=28% Similarity=0.418 Sum_probs=109.3
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
+.|.....||+|+||+||+|... +|+.||||.
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 45666778999999999999985 888999996
Q ss_pred --------------------------------------------cccccceEec---CCccEEEeecCCccccCCCCCcc
Q 046589 625 --------------------------------------------DIKASNILLN---EDFDAKVLDFGLARLISDCKSHI 657 (729)
Q Consensus 625 --------------------------------------------dlk~~nill~---~~~~~kl~dfgl~~~~~~~~~~~ 657 (729)
|+||+||+++ .++.+|++|||+++..... ..
T Consensus 102 ~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~--~~ 179 (486)
T 3mwu_A 102 LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TK 179 (486)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC--Cc
Confidence 9999999995 4568999999999876432 22
Q ss_pred eecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------------------cc-----hHHHHh
Q 046589 658 STDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK--------------------FE-----DKDIVV 712 (729)
Q Consensus 658 ~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~--------------------~~-----~~~l~~ 712 (729)
.....++++|+|||...+ .++.++||||+||++|||++|+.|+... |. -.+++.
T Consensus 180 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 258 (486)
T 3mwu_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258 (486)
T ss_dssp --CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHH
T ss_pred cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHH
Confidence 334578899999998764 5899999999999999999999998621 11 017999
Q ss_pred hcccCCCCCCCCccccC
Q 046589 713 GCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 713 ~c~~~~p~~Rp~~~~v~ 729 (729)
.|+..+|++|||+++++
T Consensus 259 ~~L~~dp~~R~t~~~~l 275 (486)
T 3mwu_A 259 KMLTFHPSLRITATQCL 275 (486)
T ss_dssp HHTCSSTTTSCCHHHHH
T ss_pred HHcCCChhhCcCHHHHh
Confidence 99999999999998863
No 292
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.73 E-value=4.6e-17 Score=162.65 Aligned_cols=154 Identities=21% Similarity=0.222 Sum_probs=138.0
Q ss_pred CcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccC
Q 046589 131 LRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSG 210 (729)
Q Consensus 131 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 210 (729)
-+.++.+++.++.++.. + .++|++|+|++|++++..|..|..+++|++|+|++|+++...+..|.++++|++|+|++
T Consensus 21 ~~~v~c~~~~l~~ip~~-~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAG-I--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCSSCCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcCccCCC-C--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 56799999999876643 2 37899999999999988899999999999999999999877677789999999999999
Q ss_pred CCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeecccccccccc
Q 046589 211 NGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGS 289 (729)
Q Consensus 211 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~~ 289 (729)
|++++..+..|..+++|++|+|++|.++ .+| ..+..+++|++|+|++|++++..+..+..+++|+.+++++|.+.+.
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELP-RGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCC-TTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccC-cccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 9999777778899999999999999998 777 5678999999999999999977777899999999999999998754
No 293
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.73 E-value=2.4e-18 Score=177.73 Aligned_cols=103 Identities=21% Similarity=0.360 Sum_probs=82.5
Q ss_pred cccccceEecCCc----cEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 046589 625 DIKASNILLNEDF----DAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQP 700 (729)
Q Consensus 625 dlk~~nill~~~~----~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p 700 (729)
|+||+||+++.++ .+|++|||+++...... ......++..|+|||......++.++||||+||++|||+||+.|
T Consensus 133 dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p 210 (283)
T 3bhy_A 133 DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210 (283)
T ss_dssp CCSGGGEEESCSSSSSCCEEECCCTTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CCChHHEEEecCCCCCCceEEEecccceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCC
Confidence 9999999998776 89999999998754321 12344678899999988888889999999999999999999999
Q ss_pred CCCC---------------cch----------HHHHhhcccCCCCCCCCccccC
Q 046589 701 TGPK---------------FED----------KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 701 ~~~~---------------~~~----------~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+... +.. .+++.+|+..+|++|||+++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l 264 (283)
T 3bhy_A 211 FLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSL 264 (283)
T ss_dssp TCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred CCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHH
Confidence 7631 000 1799999999999999999863
No 294
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.73 E-value=1.8e-18 Score=179.81 Aligned_cols=104 Identities=20% Similarity=0.381 Sum_probs=82.1
Q ss_pred cccccceEecC-CccEEEeecCCccccCCCCCcceecccccccccCccccCCC--CCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNE-DFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRAR--KANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~-~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~--~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++. ++.+|++|||+++...... .......++..|+|||..... .++.++|||||||++|||+||+.|+
T Consensus 147 dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf 225 (295)
T 2clq_A 147 DIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225 (295)
T ss_dssp CCSGGGEEEETTTCCEEECCTTTCEESCC------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTT
T ss_pred CCChhhEEEECCCCCEEEeecccccccCCCC-CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence 99999999997 8999999999998754311 112345678899999976543 3788999999999999999999997
Q ss_pred CC-C---------------------cch--HHHHhhcccCCCCCCCCccccC
Q 046589 702 GP-K---------------------FED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~-~---------------------~~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. . +.+ .+++.+|+..+|++||++++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll 277 (295)
T 2clq_A 226 YELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLL 277 (295)
T ss_dssp GGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHH
T ss_pred cCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 52 0 001 1799999999999999999863
No 295
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.73 E-value=6.1e-19 Score=184.09 Aligned_cols=105 Identities=24% Similarity=0.391 Sum_probs=84.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc--ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH--ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++........ ......++..|+|||......++.++||||+||++|||+||+.|+.
T Consensus 151 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 230 (302)
T 4e5w_A 151 DLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS 230 (302)
T ss_dssp CCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred CCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence 99999999999999999999999876543221 1223467778999998877788899999999999999999988743
Q ss_pred CC-----------------------------------cchH--HHHhhcccCCCCCCCCccccC
Q 046589 703 PK-----------------------------------FEDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~-----------------------------------~~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. +.+. +++..|++.+|++|||+++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll 294 (302)
T 4e5w_A 231 SPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 294 (302)
T ss_dssp SHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHH
T ss_pred chhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHH
Confidence 10 0011 799999999999999999873
No 296
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.73 E-value=1.7e-18 Score=181.71 Aligned_cols=105 Identities=22% Similarity=0.387 Sum_probs=79.0
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc-ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH-ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++........ ......++..|+|||......++.++|||||||++|||+| |+.|+.
T Consensus 172 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 251 (313)
T 3brb_A 172 DLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYP 251 (313)
T ss_dssp CCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred CCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCc
Confidence 99999999999999999999999875432211 1223456778999999888889999999999999999999 777765
Q ss_pred CC-cc-------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 703 PK-FE-------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~-~~-------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. .. + .+++..|++.+|++|||+++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~ 300 (313)
T 3brb_A 252 GVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLR 300 (313)
T ss_dssp TCCGGGHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 31 00 1 1799999999999999999863
No 297
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.73 E-value=2e-18 Score=189.30 Aligned_cols=105 Identities=20% Similarity=0.404 Sum_probs=77.7
Q ss_pred cccccceEecC-----CccEEEeecCCccccCCCCC--cceecccccccccCccccC---CCCCCchhhHHHHHHHHHHH
Q 046589 625 DIKASNILLNE-----DFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGR---ARKANERDNIYRFGVVLLEL 694 (729)
Q Consensus 625 dlk~~nill~~-----~~~~kl~dfgl~~~~~~~~~--~~~~~~~~~~~y~ape~~~---~~~~~~~~Dv~s~G~vl~el 694 (729)
|+||+||+++. ...+|++|||+|+....... .......+|.+|+|||... ...++.++||||+||++|||
T Consensus 143 DlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~el 222 (432)
T 3p23_A 143 DLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYV 222 (432)
T ss_dssp CCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHH
T ss_pred CCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHH
Confidence 99999999952 34688999999987653221 1223457899999999876 35667899999999999999
Q ss_pred Hh-CCCCCCCCcc------------------------hHHHHhhcccCCCCCCCCccccC
Q 046589 695 VI-RKQPTGPKFE------------------------DKDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 695 ~t-g~~p~~~~~~------------------------~~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+| |+.|+..... -.+++.+|++.+|++|||+++|+
T Consensus 223 lt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl 282 (432)
T 3p23_A 223 ISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVL 282 (432)
T ss_dssp HTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred HcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHH
Confidence 99 8888752110 01799999999999999999874
No 298
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.73 E-value=4.7e-18 Score=176.31 Aligned_cols=101 Identities=26% Similarity=0.453 Sum_probs=83.0
Q ss_pred cccccceEec-CCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLN-EDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~-~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++ .++.+|++|||++...... ......++..|+|||... ..++.++||||+||++|||+||+.|+..
T Consensus 156 dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~ 231 (290)
T 1t4h_A 156 DLKCDNIFITGPTGSVKIGDLGLATLKRAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp CCCGGGEEESSTTSCEEECCTTGGGGCCTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CCCHHHEEEECCCCCEEEeeCCCccccccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence 9999999998 7899999999999764421 223456788999999775 4589999999999999999999999863
Q ss_pred Ccc----------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 704 KFE----------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~~~----------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... + .+++..|++.+|++|||+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 281 (290)
T 1t4h_A 232 CQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281 (290)
T ss_dssp CSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred cCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 100 0 1799999999999999999874
No 299
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.73 E-value=1e-18 Score=187.12 Aligned_cols=105 Identities=28% Similarity=0.428 Sum_probs=84.8
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc-ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH-ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+||+++.++.+||+|||+++........ ......++.+|+|||......++.++|||||||++|||+| |+.|+.
T Consensus 218 Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 297 (359)
T 3vhe_A 218 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 297 (359)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred CCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCC
Confidence 46899999999999999999999876432222 2234567889999998878889999999999999999999 998876
Q ss_pred C-Ccc--------------------hH--HHHhhcccCCCCCCCCccccC
Q 046589 703 P-KFE--------------------DK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~-~~~--------------------~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. ... +. +++..|++.+|++|||+++|+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell 347 (359)
T 3vhe_A 298 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 347 (359)
T ss_dssp TCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred ccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 3 111 01 799999999999999999874
No 300
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.73 E-value=1.8e-18 Score=187.82 Aligned_cols=61 Identities=18% Similarity=0.135 Sum_probs=52.5
Q ss_pred cEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 638 DAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 638 ~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
.+|++|||+++..... .....+|.+|+|||......++.++||||+||++|||+||+.|+.
T Consensus 234 ~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~ 294 (397)
T 1wak_A 234 KVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFE 294 (397)
T ss_dssp CEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred ceEecccccccccccc----CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCC
Confidence 7999999999875432 234467899999998888889999999999999999999999986
No 301
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.73 E-value=1.1e-19 Score=189.85 Aligned_cols=105 Identities=26% Similarity=0.396 Sum_probs=74.1
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcc---eecccccccccCccccCCC------CCCchhhHHHHHHHHHHHH
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHI---STDVASAISYVPPEYGRAR------KANERDNIYRFGVVLLELV 695 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~---~~~~~~~~~y~ape~~~~~------~~~~~~Dv~s~G~vl~el~ 695 (729)
|+||+||+++.++.+|++|||+++......... .....+|.+|+|||..... .++.++|||||||++|||+
T Consensus 133 Dlkp~Nil~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~ 212 (303)
T 3gxj_A 133 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212 (303)
T ss_dssp CCCGGGC-CCTTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTG
T ss_pred cCCHHHeEECCCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHH
Confidence 899999999999999999999997655322211 1234688999999977554 3346899999999999999
Q ss_pred hC----------CCCCCCC----------------------cch-----------HHHHhhcccCCCCCCCCccccC
Q 046589 696 IR----------KQPTGPK----------------------FED-----------KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 696 tg----------~~p~~~~----------------------~~~-----------~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|| +.|+... ... .+++..||+.+|++|||+++|+
T Consensus 213 ~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~ 289 (303)
T 3gxj_A 213 RRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 289 (303)
T ss_dssp GGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHH
T ss_pred hcCCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHH
Confidence 99 5555310 000 0699999999999999999873
No 302
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.73 E-value=1.3e-18 Score=185.34 Aligned_cols=105 Identities=20% Similarity=0.359 Sum_probs=85.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcc-eecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHI-STDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~-~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++......... .....++..|+|||......++.++|||||||++|||+| |+.|+.
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 276 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence 899999999999999999999998765332222 224466788999998877888999999999999999998 988876
Q ss_pred C-Ccc--------------------hH--HHHhhcccCCCCCCCCccccC
Q 046589 703 P-KFE--------------------DK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~-~~~--------------------~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. ... +. +++..||+.+|++|||+++|+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~ 326 (344)
T 1rjb_A 277 GIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLT 326 (344)
T ss_dssp TCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred cCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 3 110 01 799999999999999999863
No 303
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.73 E-value=1.8e-18 Score=179.14 Aligned_cols=105 Identities=24% Similarity=0.372 Sum_probs=84.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcc--eecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHI--STDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~--~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~ 701 (729)
|+||+||+++.++.+|++|||+++......... .....++..|+|||......++.++||||+||++|||+| |+.|+
T Consensus 135 dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~ 214 (287)
T 1u59_A 135 DLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY 214 (287)
T ss_dssp CCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred CCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCc
Confidence 999999999999999999999998765322211 112345788999998877778999999999999999999 99997
Q ss_pred CCC-c-------------------chH--HHHhhcccCCCCCCCCccccC
Q 046589 702 GPK-F-------------------EDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~-~-------------------~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... . .+. +++..|+..+|++||++++++
T Consensus 215 ~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~ 264 (287)
T 1u59_A 215 KKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVE 264 (287)
T ss_dssp TTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHH
T ss_pred ccCCHHHHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 631 0 011 799999999999999999863
No 304
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.73 E-value=2.1e-18 Score=182.41 Aligned_cols=105 Identities=26% Similarity=0.394 Sum_probs=83.8
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCC-----------cceecccccccccCccccCCCCCCchhhHHHHHHHHHH
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKS-----------HISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLE 693 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~-----------~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~e 693 (729)
|+||+||+++.++.+|++|||+++....... .......+|..|+|||......++.++||||+||++||
T Consensus 189 Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e 268 (332)
T 3qd2_B 189 DLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFE 268 (332)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHH
T ss_pred CCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHH
Confidence 8999999999999999999999987653221 11123468899999998888889999999999999999
Q ss_pred HHhCCCCCCC-----------Ccc---------hHHHHhhcccCCCCCCCCccccC
Q 046589 694 LVIRKQPTGP-----------KFE---------DKDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 694 l~tg~~p~~~-----------~~~---------~~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|++|..|... .+. ..+++..|++.+|++|||++|++
T Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 324 (332)
T 3qd2_B 269 LLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDII 324 (332)
T ss_dssp HHSCCCCHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHH
T ss_pred HHHcCCChhHHHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCCCHHHHh
Confidence 9999877431 111 01799999999999999999874
No 305
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.73 E-value=1.6e-18 Score=183.75 Aligned_cols=105 Identities=25% Similarity=0.403 Sum_probs=84.4
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc-ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH-ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++........ ......++..|+|||......++.++|||||||++|||+| |+.|+.
T Consensus 182 Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 261 (334)
T 2pvf_A 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261 (334)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred CCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcC
Confidence 99999999999999999999999876532211 1123355678999998877778999999999999999999 888875
Q ss_pred CC-cc-------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 703 PK-FE-------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~-~~-------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. .. . .+++..||+.+|++|||+++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 310 (334)
T 2pvf_A 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310 (334)
T ss_dssp TCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred cCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 31 10 0 1799999999999999999873
No 306
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.73 E-value=3.7e-18 Score=185.09 Aligned_cols=78 Identities=18% Similarity=0.259 Sum_probs=63.2
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCC------cceecccccccccCccccCC--CCCCchhhHHHHHHHHHHHHh
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKS------HISTDVASAISYVPPEYGRA--RKANERDNIYRFGVVLLELVI 696 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~------~~~~~~~~~~~y~ape~~~~--~~~~~~~Dv~s~G~vl~el~t 696 (729)
|+||+||+++.++.+|++|||.+........ .......++.+|+|||.... ..++.++||||+||++|||+|
T Consensus 153 Dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~ 232 (389)
T 3gni_B 153 SVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELAN 232 (389)
T ss_dssp CCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHH
T ss_pred CCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHH
Confidence 9999999999999999999998765432110 11112467888999998765 678999999999999999999
Q ss_pred CCCCCC
Q 046589 697 RKQPTG 702 (729)
Q Consensus 697 g~~p~~ 702 (729)
|+.|+.
T Consensus 233 g~~pf~ 238 (389)
T 3gni_B 233 GHVPFK 238 (389)
T ss_dssp SSCTTT
T ss_pred CCCCCC
Confidence 999985
No 307
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.73 E-value=1.8e-18 Score=178.25 Aligned_cols=101 Identities=26% Similarity=0.483 Sum_probs=78.2
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++..... .....++..|+|||......++.++||||+||++|||+| |+.|+..
T Consensus 142 dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 217 (278)
T 1byg_A 142 DLAARNVLVSEDNVAKVSDFGLTKEASST----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 217 (278)
T ss_dssp CCSGGGEEECTTSCEEECCCCC----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTT
T ss_pred CCCcceEEEeCCCcEEEeecccccccccc----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999998765421 122355778999998877888999999999999999999 9888753
Q ss_pred -Ccc-------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 704 -KFE-------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 -~~~-------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... + .+++..|++.+|++|||+++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~ 265 (278)
T 1byg_A 218 IPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLR 265 (278)
T ss_dssp SCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHH
Confidence 111 0 1799999999999999999863
No 308
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.73 E-value=1.7e-18 Score=180.72 Aligned_cols=137 Identities=22% Similarity=0.377 Sum_probs=108.7
Q ss_pred CcccccccCCCCCCcceEEEeecC-CCCceeeec----------------------------------------------
Q 046589 592 NNKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK---------------------------------------------- 624 (729)
Q Consensus 592 ~~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~---------------------------------------------- 624 (729)
.+.|.....+|+|+||.||+|... +|+.||+|.
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 356777788999999999999986 688999985
Q ss_pred --------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceec
Q 046589 625 --------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTD 660 (729)
Q Consensus 625 --------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~ 660 (729)
|+||+||+++.++.+|++|||++...... ......
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~ 176 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQKRDS 176 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HHC---
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc-cccccc
Confidence 99999999999999999999987543210 011123
Q ss_pred ccccccccCcccc-----CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc----------------------ch--HHHH
Q 046589 661 VASAISYVPPEYG-----RARKANERDNIYRFGVVLLELVIRKQPTGPKF----------------------ED--KDIV 711 (729)
Q Consensus 661 ~~~~~~y~ape~~-----~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~----------------------~~--~~l~ 711 (729)
..++..|+|||.. ....++.++|||||||++|||+||+.|+.... .. .+++
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 256 (302)
T 2j7t_A 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFL 256 (302)
T ss_dssp --CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHH
T ss_pred ccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHH
Confidence 4678899999976 35678899999999999999999999976310 01 1799
Q ss_pred hhcccCCCCCCCCccccC
Q 046589 712 VGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 712 ~~c~~~~p~~Rp~~~~v~ 729 (729)
..|++.+|++|||+++++
T Consensus 257 ~~~l~~dp~~Rps~~~ll 274 (302)
T 2j7t_A 257 KIALDKNPETRPSAAQLL 274 (302)
T ss_dssp HHHSCSCTTTSCCHHHHT
T ss_pred HHHcccChhhCCCHHHHh
Confidence 999999999999999875
No 309
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.73 E-value=1e-18 Score=185.83 Aligned_cols=105 Identities=26% Similarity=0.403 Sum_probs=83.8
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCC-cceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKS-HISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~-~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++....... .......++..|+|||......++.++|||||||++|||+| |+.|+.
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 278 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence 8999999999999999999999986542211 11223466788999998877789999999999999999999 988876
Q ss_pred CCcc--------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 703 PKFE--------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~~~--------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.... . .+++..||+.+|++|||+++|+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~ 327 (343)
T 1luf_A 279 GMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIH 327 (343)
T ss_dssp TSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence 3110 1 1799999999999999999863
No 310
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.73 E-value=2.3e-17 Score=171.14 Aligned_cols=161 Identities=27% Similarity=0.387 Sum_probs=117.7
Q ss_pred EcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCC
Q 046589 111 VLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFT 190 (729)
Q Consensus 111 ~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~ 190 (729)
.+....+.+.. .+..+++|++|++++|.+.... .+..+++|++|+|++|++++..| ++.+++|++|++++|+++
T Consensus 30 ~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 103 (291)
T 1h6t_A 30 NLKKKSVTDAV--TQNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVK 103 (291)
T ss_dssp HTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred HhcCCCccccc--chhhcCcccEEEccCCCcccCh--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCC
Confidence 34445555432 2346788999999999988763 47888999999999999985443 888999999999999887
Q ss_pred ccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccc
Q 046589 191 GEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEI 270 (729)
Q Consensus 191 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l 270 (729)
+ + ..+..+++|++|++++|++++. ..+..+++|++|++++|.+++ + ..+..+++|++|++++|.+++..| +
T Consensus 104 ~-~-~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~-~--~~l~~l~~L~~L~L~~N~l~~~~~--l 174 (291)
T 1h6t_A 104 D-L-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITD-I--TVLSRLTKLDTLSLEDNQISDIVP--L 174 (291)
T ss_dssp C-G-GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCC-C--GGGGGCTTCSEEECCSSCCCCCGG--G
T ss_pred C-C-hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCc-c--hhhccCCCCCEEEccCCccccchh--h
Confidence 4 3 3488888999999999888753 457788888888888888874 3 457778888888888887764332 5
Q ss_pred cCCCcCCeeccccccc
Q 046589 271 SHLKKLSDHYLGINQF 286 (729)
Q Consensus 271 ~~l~~L~~l~l~~n~l 286 (729)
..+++|+.++++.|.+
T Consensus 175 ~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 175 AGLTKLQNLYLSKNHI 190 (291)
T ss_dssp TTCTTCCEEECCSSCC
T ss_pred cCCCccCEEECCCCcC
Confidence 5555555555544443
No 311
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.73 E-value=1.1e-18 Score=200.55 Aligned_cols=105 Identities=24% Similarity=0.383 Sum_probs=82.4
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCC--cceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~--~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~ 701 (729)
|+||+||+++.++.+||+|||+++....... .......++..|+|||......++.++|||||||++|||+| |+.|+
T Consensus 494 DLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf 573 (635)
T 4fl3_A 494 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 573 (635)
T ss_dssp CCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred CCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999987653222 11223355678999999888889999999999999999999 99998
Q ss_pred CCCcc--------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 702 GPKFE--------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~~~--------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
...-. + .+++..||+.+|++|||+++|+
T Consensus 574 ~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~ 623 (635)
T 4fl3_A 574 RGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE 623 (635)
T ss_dssp TTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence 63100 0 1799999999999999999873
No 312
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.73 E-value=3e-18 Score=179.12 Aligned_cols=134 Identities=24% Similarity=0.383 Sum_probs=111.4
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
+.|.....+|+|+||.||+|+.. +|+.||||.
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 35566778999999999999975 788999985
Q ss_pred ------------------------------------------cccccceEe---cCCccEEEeecCCccccCCCCCccee
Q 046589 625 ------------------------------------------DIKASNILL---NEDFDAKVLDFGLARLISDCKSHIST 659 (729)
Q Consensus 625 ------------------------------------------dlk~~nill---~~~~~~kl~dfgl~~~~~~~~~~~~~ 659 (729)
|+||+||++ +.++.++++|||+++..... ...
T Consensus 89 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~---~~~ 165 (304)
T 2jam_A 89 SGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---IMS 165 (304)
T ss_dssp CSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB---TTH
T ss_pred CCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC---ccc
Confidence 999999999 77899999999998764321 122
Q ss_pred cccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---------------c--------ch--HHHHhhc
Q 046589 660 DVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK---------------F--------ED--KDIVVGC 714 (729)
Q Consensus 660 ~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~---------------~--------~~--~~l~~~c 714 (729)
...++.+|+|||......++.++||||+||++|||+||+.|+... + .+ .+++..|
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~ 245 (304)
T 2jam_A 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHL 245 (304)
T ss_dssp HHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHH
T ss_pred cccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHH
Confidence 346788999999988888999999999999999999999997521 0 01 1799999
Q ss_pred ccCCCCCCCCccccC
Q 046589 715 VSDNPIAKPGMLRVQ 729 (729)
Q Consensus 715 ~~~~p~~Rp~~~~v~ 729 (729)
+..+|++|||+++++
T Consensus 246 l~~dp~~Rps~~~~l 260 (304)
T 2jam_A 246 LEKDPNERYTCEKAL 260 (304)
T ss_dssp HCSSTTTSCCHHHHH
T ss_pred cCCChhHCcCHHHHh
Confidence 999999999999863
No 313
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.73 E-value=2.5e-18 Score=183.66 Aligned_cols=137 Identities=28% Similarity=0.423 Sum_probs=110.4
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
++|.....+|+|+||.||+|... +|+.||||.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 46777788999999999999975 788999995
Q ss_pred ----------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCc--
Q 046589 625 ----------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSH-- 656 (729)
Q Consensus 625 ----------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~-- 656 (729)
|+||+||+++.++.+|++|||+++........
T Consensus 91 lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~ 170 (353)
T 2b9h_A 91 IIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170 (353)
T ss_dssp EEECCCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC-------
T ss_pred EEEeccCccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccccccccccc
Confidence 99999999999999999999999875422111
Q ss_pred -------ceecccccccccCccccC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-----------------------
Q 046589 657 -------ISTDVASAISYVPPEYGR-ARKANERDNIYRFGVVLLELVIRKQPTGPKF----------------------- 705 (729)
Q Consensus 657 -------~~~~~~~~~~y~ape~~~-~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~----------------------- 705 (729)
......++.+|+|||... ...++.++||||+||++|||++|+.|+...-
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (353)
T 2b9h_A 171 EPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRC 250 (353)
T ss_dssp ---------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTT
T ss_pred CccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccc
Confidence 111246788999999654 4678999999999999999999999975310
Q ss_pred ----------------------------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 706 ----------------------------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 706 ----------------------------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.+ .+++.+|+..+|++|||+++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 304 (353)
T 2b9h_A 251 IESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304 (353)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred cccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 00 1799999999999999999874
No 314
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.73 E-value=1.5e-18 Score=182.33 Aligned_cols=105 Identities=28% Similarity=0.435 Sum_probs=85.8
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcc-eecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHI-STDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~-~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++......... .....++.+|+|||......++.++||||+||++|||+| |+.|+.
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 999999999999999999999998765432222 224466788999998877888999999999999999999 988875
Q ss_pred C-Ccc--------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 703 P-KFE--------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~-~~~--------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. ... + .+++..|++.+|++|||+++|+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 302 (316)
T 2xir_A 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302 (316)
T ss_dssp TCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred ccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 3 111 0 1799999999999999999873
No 315
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.73 E-value=1.3e-18 Score=179.44 Aligned_cols=104 Identities=24% Similarity=0.418 Sum_probs=83.8
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.++.+|++|||+++...... .......++..|+|||......++.++|||||||++|||+||+.|+...
T Consensus 141 dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 219 (279)
T 2w5a_A 141 DLKPANVFLDGKQNVKLGDFGLARILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF 219 (279)
T ss_dssp CCSGGGEEECSSSCEEECCCCHHHHC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccchhhEEEcCCCCEEEecCchheeecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc
Confidence 899999999999999999999988754321 1122346788999999887788899999999999999999999997631
Q ss_pred c--------------------chH--HHHhhcccCCCCCCCCccccC
Q 046589 705 F--------------------EDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 705 ~--------------------~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
- .+. +++..|+..+|++|||+++|+
T Consensus 220 ~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll 266 (279)
T 2w5a_A 220 SQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266 (279)
T ss_dssp SHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CHHHHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 0 011 799999999999999999874
No 316
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.73 E-value=3.9e-18 Score=181.58 Aligned_cols=105 Identities=22% Similarity=0.305 Sum_probs=81.5
Q ss_pred cccccceEecCCc--cEEEeecCCccccCCCCC---cceecccccccccCccccCC--CCCCchhhHHHHHHHHHHHHhC
Q 046589 625 DIKASNILLNEDF--DAKVLDFGLARLISDCKS---HISTDVASAISYVPPEYGRA--RKANERDNIYRFGVVLLELVIR 697 (729)
Q Consensus 625 dlk~~nill~~~~--~~kl~dfgl~~~~~~~~~---~~~~~~~~~~~y~ape~~~~--~~~~~~~Dv~s~G~vl~el~tg 697 (729)
|+||+||+++.++ .+||+|||+++....... .......++..|+|||.... ..++.++|||||||++|||+||
T Consensus 193 Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g 272 (345)
T 3hko_A 193 DIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG 272 (345)
T ss_dssp CCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHS
T ss_pred CCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHC
Confidence 7899999998766 899999999986542111 11234578899999997653 6788999999999999999999
Q ss_pred CCCCCCC-----------------------cch--HHHHhhcccCCCCCCCCccccC
Q 046589 698 KQPTGPK-----------------------FED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 698 ~~p~~~~-----------------------~~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+.|+... +.+ .+++..|++.+|++|||+++++
T Consensus 273 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 329 (345)
T 3hko_A 273 AVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL 329 (345)
T ss_dssp SCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred CCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 9998521 001 1799999999999999999863
No 317
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.73 E-value=7.1e-18 Score=176.23 Aligned_cols=105 Identities=19% Similarity=0.303 Sum_probs=84.3
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCC-cceecccccccccCccccCCC--CCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKS-HISTDVASAISYVPPEYGRAR--KANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~-~~~~~~~~~~~y~ape~~~~~--~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++.++.+|++|||+++....... .......++..|+|||..... .++.++||||+||++|||+||+.|+
T Consensus 134 dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~ 213 (305)
T 2wtk_C 134 DIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213 (305)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSC
T ss_pred CCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999987643221 222345678899999977543 3478999999999999999999998
Q ss_pred CCCcc-------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 702 GPKFE-------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~~~-------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
...-. + .+++.+|+..+|++|||+++++
T Consensus 214 ~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll 262 (305)
T 2wtk_C 214 EGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIR 262 (305)
T ss_dssp CCSSHHHHHHHHHHCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCchHHHHHHHHhcCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 73110 1 1799999999999999999863
No 318
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.73 E-value=1.7e-18 Score=181.65 Aligned_cols=105 Identities=24% Similarity=0.396 Sum_probs=84.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcc-eecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHI-STDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~-~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++......... .....++..|+|||...+..++.++||||+||++|||+| |+.|+.
T Consensus 175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 254 (314)
T 2ivs_A 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 254 (314)
T ss_dssp CCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999998764322211 123355678999998877788999999999999999999 988876
Q ss_pred CC-cc-------------------hH--HHHhhcccCCCCCCCCccccC
Q 046589 703 PK-FE-------------------DK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~-~~-------------------~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. .. +. +++..|++.+|++|||+++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~ 303 (314)
T 2ivs_A 255 GIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADIS 303 (314)
T ss_dssp TCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCHHHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 31 10 11 799999999999999999873
No 319
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.73 E-value=1.6e-18 Score=180.61 Aligned_cols=105 Identities=30% Similarity=0.523 Sum_probs=82.1
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCC---cceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKS---HISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~---~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++.++.+|++|||+++....... .......++..|+|||......++.++||||+||++||++||+.|+
T Consensus 153 dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~ 232 (298)
T 3f66_A 153 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 232 (298)
T ss_dssp CCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred CCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999986543211 1122345677899999887788899999999999999999966654
Q ss_pred CCCc---------------------chH--HHHhhcccCCCCCCCCccccC
Q 046589 702 GPKF---------------------EDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~~---------------------~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.... .+. +++..|++.+|++|||+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell 283 (298)
T 3f66_A 233 YPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 283 (298)
T ss_dssp STTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 3210 011 799999999999999999873
No 320
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.73 E-value=6.7e-19 Score=186.16 Aligned_cols=105 Identities=26% Similarity=0.397 Sum_probs=85.0
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcc--eecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHI--STDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~--~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++......... .....++..|+|||......++.++||||+||++|||+||+.|+.
T Consensus 152 Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~ 231 (327)
T 3lxl_A 152 DLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSC 231 (327)
T ss_dssp CCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred CCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCc
Confidence 999999999999999999999998765322211 123456778999998877778999999999999999999998864
Q ss_pred CCc-----------------------------------chH--HHHhhcccCCCCCCCCccccC
Q 046589 703 PKF-----------------------------------EDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~~-----------------------------------~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... .+. +++..|++.+|++|||+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell 295 (327)
T 3lxl_A 232 SPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALG 295 (327)
T ss_dssp SHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred cccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 200 011 799999999999999999873
No 321
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.72 E-value=4.5e-18 Score=184.00 Aligned_cols=103 Identities=22% Similarity=0.303 Sum_probs=84.0
Q ss_pred cccccceEec-CCccEEEeecCCccccCCCCCcceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLN-EDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~-~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++ .++.+||+|||+|+....... .....++.+|+|||...+ ..++.++||||+||++|||++|+.|+.
T Consensus 166 Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 243 (383)
T 3eb0_A 166 DIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFS 243 (383)
T ss_dssp CCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred ccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCC
Confidence 9999999998 689999999999987653222 234567889999997665 458999999999999999999999986
Q ss_pred CC----------------------------------------cc----------hHHHHhhcccCCCCCCCCccccC
Q 046589 703 PK----------------------------------------FE----------DKDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~----------------------------------------~~----------~~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. |. -.+++.+|+..+|++|||++|++
T Consensus 244 ~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 320 (383)
T 3eb0_A 244 GETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAM 320 (383)
T ss_dssp CSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred CCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 31 00 11799999999999999999863
No 322
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.72 E-value=3.2e-18 Score=180.75 Aligned_cols=104 Identities=19% Similarity=0.396 Sum_probs=77.9
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccC-----CCCCCchhhHHHHHHHHHHHHhCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGR-----ARKANERDNIYRFGVVLLELVIRKQ 699 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~-----~~~~~~~~Dv~s~G~vl~el~tg~~ 699 (729)
|+||+||+++.++.+|++|||++....... .......++..|+|||... ...++.++|||||||++|||+||+.
T Consensus 154 dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~ 232 (326)
T 2x7f_A 154 DIKGQNVLLTENAEVKLVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 232 (326)
T ss_dssp CCSGGGEEECTTCCEEECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSC
T ss_pred CCcHHHEEEcCCCCEEEeeCcCceecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCC
Confidence 999999999999999999999987654211 1122346788999999765 4668899999999999999999999
Q ss_pred CCCCC---------------------cchH--HHHhhcccCCCCCCCCccccC
Q 046589 700 PTGPK---------------------FEDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 700 p~~~~---------------------~~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|+... +.+. +++..|+..+|++|||+++++
T Consensus 233 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll 285 (326)
T 2x7f_A 233 PLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLM 285 (326)
T ss_dssp TTTTSCHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred CCCCCcHHHHHHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHh
Confidence 97521 1111 799999999999999999863
No 323
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.72 E-value=1.6e-18 Score=183.99 Aligned_cols=102 Identities=21% Similarity=0.337 Sum_probs=67.5
Q ss_pred cccccceEecC---CccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNE---DFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~---~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++. ++.+|++|||+++..... ......++.+|+|||......++.++||||+||++|||+||+.|+
T Consensus 153 dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf 229 (336)
T 3fhr_A 153 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 229 (336)
T ss_dssp CCSGGGEEESCSSTTCCEEECCCTTCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CCCHHHEEEEecCCCceEEEeccccceecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 99999999985 456999999999865421 123456788999999987788899999999999999999999997
Q ss_pred CCC------------------------c---ch--HHHHhhcccCCCCCCCCccccC
Q 046589 702 GPK------------------------F---ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~------------------------~---~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... | .+ .+++..|++.+|++|||+++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 286 (336)
T 3fhr_A 230 YSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFM 286 (336)
T ss_dssp ---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred CCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 520 0 00 1799999999999999999874
No 324
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.72 E-value=1.2e-18 Score=180.64 Aligned_cols=100 Identities=22% Similarity=0.366 Sum_probs=80.9
Q ss_pred cccccceEecCCcc--------EEEeecCCccccCCCCCcceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHH
Q 046589 625 DIKASNILLNEDFD--------AKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELV 695 (729)
Q Consensus 625 dlk~~nill~~~~~--------~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~ 695 (729)
|+||+||+++.++. +|++|||+++.... .....++.+|+|||.... ..++.++||||+||++|||+
T Consensus 138 Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~ 212 (289)
T 4fvq_A 138 NVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEIC 212 (289)
T ss_dssp CCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHH
T ss_pred CcCcceEEEecCCcccccccceeeeccCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHH
Confidence 99999999998876 99999999876432 123456788999998766 67899999999999999999
Q ss_pred hCCCCCCCCcc---------------------hHHHHhhcccCCCCCCCCccccC
Q 046589 696 IRKQPTGPKFE---------------------DKDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 696 tg~~p~~~~~~---------------------~~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
||+.|+..... -.+++..|++.+|++|||+++++
T Consensus 213 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll 267 (289)
T 4fvq_A 213 SGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAII 267 (289)
T ss_dssp TTTCCTTTTSCHHHHHHHHHTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHH
T ss_pred cCCCCCccccchHHHHHHhhccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 97666542111 01799999999999999999873
No 325
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.72 E-value=1.1e-18 Score=183.69 Aligned_cols=105 Identities=24% Similarity=0.406 Sum_probs=84.5
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc--ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH--ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++........ ......++..|+|||......++.++||||+||++|||+||+.|+.
T Consensus 159 Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~ 238 (318)
T 3lxp_A 159 DLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 238 (318)
T ss_dssp CCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred CCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCccc
Confidence 99999999999999999999999876543221 1223456778999998877788899999999999999999998865
Q ss_pred CC---------c--------------------------chH--HHHhhcccCCCCCCCCccccC
Q 046589 703 PK---------F--------------------------EDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~---------~--------------------------~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. + ... +++..||+.+|++|||+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell 302 (318)
T 3lxp_A 239 SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLI 302 (318)
T ss_dssp SHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred ccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHH
Confidence 21 0 001 799999999999999999874
No 326
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.72 E-value=4.7e-18 Score=181.69 Aligned_cols=101 Identities=24% Similarity=0.316 Sum_probs=81.0
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++..... .....++.+|+|||...+ ..++.++||||+||++|||+||+.|+..
T Consensus 151 dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 226 (353)
T 3coi_A 151 DLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 226 (353)
T ss_dssp SCCGGGEEECTTCCEEECSTTCTTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBS
T ss_pred CCCHHHEeECCCCcEEEeecccccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999764321 234567889999997765 6788999999999999999999999753
Q ss_pred -Cc-------------------------------------------------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 704 -KF-------------------------------------------------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 -~~-------------------------------------------------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. .. .+++.+|+..+|++|||+++++
T Consensus 227 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l 304 (353)
T 3coi_A 227 KDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQAL 304 (353)
T ss_dssp SCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 10 00 1799999999999999999863
No 327
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.72 E-value=3e-18 Score=176.97 Aligned_cols=103 Identities=24% Similarity=0.400 Sum_probs=85.5
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC-
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGP- 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~- 703 (729)
|+||+||+++.++.+|++|||+++...... ......++.+|+|||......++.++|||||||++|||+||+.|+..
T Consensus 147 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~ 224 (284)
T 2a19_B 147 DLKPSNIFLVDTKQVKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET 224 (284)
T ss_dssp CCSGGGEEEEETTEEEECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH
T ss_pred cCCHHHEEEcCCCCEEECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH
Confidence 999999999999999999999998765322 12344678899999988888889999999999999999999988541
Q ss_pred --------------Ccch--HHHHhhcccCCCCCCCCccccC
Q 046589 704 --------------KFED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 --------------~~~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.+.. .+++..|+..+|++|||++|++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l 266 (284)
T 2a19_B 225 SKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEIL 266 (284)
T ss_dssp HHHHHHHHTTCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHhhcccccccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 0111 1799999999999999999873
No 328
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.72 E-value=1.7e-18 Score=182.41 Aligned_cols=105 Identities=27% Similarity=0.426 Sum_probs=83.7
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc-ceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH-ISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++........ ......++.+|+|||...+..++.++||||+||++|||+| |+.|+.
T Consensus 163 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 242 (322)
T 1p4o_A 163 DLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 242 (322)
T ss_dssp CCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTT
T ss_pred CCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccc
Confidence 99999999999999999999999865432111 1122345778999998877888999999999999999999 777765
Q ss_pred CC-c-------------------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 703 PK-F-------------------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~-~-------------------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. . .. .+++.+|++.+|++|||+++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l 291 (322)
T 1p4o_A 243 GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291 (322)
T ss_dssp TSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred cCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHH
Confidence 21 0 01 1799999999999999999863
No 329
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.72 E-value=2e-18 Score=182.92 Aligned_cols=105 Identities=24% Similarity=0.385 Sum_probs=85.0
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcc-eecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHI-STDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~-~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++......... .....++..|+|||......++.++|||||||++|||+| |+.|+.
T Consensus 189 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 268 (333)
T 2i1m_A 189 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP 268 (333)
T ss_dssp CCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred CcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCc
Confidence 999999999999999999999998654322221 223456778999998877888999999999999999999 888875
Q ss_pred CCcc---------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 703 PKFE---------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~~~---------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.... + .+++..|++.+|++|||+++|+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~ 318 (333)
T 2i1m_A 269 GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQIC 318 (333)
T ss_dssp TCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred ccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHH
Confidence 3110 0 1799999999999999999873
No 330
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.72 E-value=2.2e-18 Score=178.96 Aligned_cols=105 Identities=24% Similarity=0.380 Sum_probs=83.8
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcce--ecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHIS--TDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~--~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~ 701 (729)
|+||+||+++.++.+|++|||+++.......... ....++..|+|||......++.++||||+||++|||+| |+.|+
T Consensus 142 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~ 221 (291)
T 1xbb_A 142 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 221 (291)
T ss_dssp CCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred CCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCC
Confidence 9999999999999999999999987653322111 12345678999998877778899999999999999999 99997
Q ss_pred CCC-c-------------------chH--HHHhhcccCCCCCCCCccccC
Q 046589 702 GPK-F-------------------EDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~-~-------------------~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... . .+. +++..||+.+|++||++++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~ 271 (291)
T 1xbb_A 222 RGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE 271 (291)
T ss_dssp TTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 631 0 011 799999999999999999863
No 331
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.72 E-value=2.3e-18 Score=178.55 Aligned_cols=105 Identities=24% Similarity=0.414 Sum_probs=82.9
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcc--eecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHI--STDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~--~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~ 701 (729)
|+||+||+++.++.+|++|||+++......... .....++.+|+|||......++.++||||+||++|||+| |+.|+
T Consensus 146 dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~ 225 (291)
T 1u46_A 146 DLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 225 (291)
T ss_dssp CCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred CCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 999999999999999999999998765432211 123456778999998877778899999999999999999 99887
Q ss_pred CCCc---------------------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 702 GPKF---------------------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~~---------------------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
...- .+ .+++..|+..+|++|||+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~ 276 (291)
T 1u46_A 226 IGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALR 276 (291)
T ss_dssp TTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred ccCCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHH
Confidence 5210 01 1799999999999999999863
No 332
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.72 E-value=6.2e-18 Score=189.21 Aligned_cols=102 Identities=25% Similarity=0.450 Sum_probs=83.2
Q ss_pred cccccceEecC---CccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNE---DFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~---~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++. ++.+|++|||+++..... .......+|.+|+|||... ..++.++||||+||++|||++|+.|+
T Consensus 161 Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf 237 (494)
T 3lij_A 161 DLKPENLLLESKEKDALIKIVDFGLSAVFENQ--KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPF 237 (494)
T ss_dssp CCSGGGEEESCSSTTCCEEECCCTTCEECBTT--BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cCChhhEEEeCCCCCCcEEEEECCCCeECCCC--ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCC
Confidence 99999999975 456999999999876532 2233457889999999875 56899999999999999999999998
Q ss_pred CCC--------------------cc---h--HHHHhhcccCCCCCCCCccccC
Q 046589 702 GPK--------------------FE---D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~--------------------~~---~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... |. + .+++..|++.+|++|||+++++
T Consensus 238 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l 290 (494)
T 3lij_A 238 GGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQAL 290 (494)
T ss_dssp CCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHh
Confidence 621 11 1 1799999999999999999863
No 333
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.72 E-value=2.1e-17 Score=177.11 Aligned_cols=159 Identities=26% Similarity=0.193 Sum_probs=141.6
Q ss_pred CCcEEEEcCCCCCcCcCCccCC-CCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEE
Q 046589 105 LRVVYQVLRTQSLKGPVSPLLF-DLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLS 183 (729)
Q Consensus 105 ~~~~~l~l~~~~l~~~~~~~l~-~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 183 (729)
..++.|+|++|.+++..+..+. .+++|++|+|++|+++++.+..|.++++|++|+|++|+|+...+..|..+++|++|+
T Consensus 39 ~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 118 (361)
T 2xot_A 39 SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLL 118 (361)
T ss_dssp TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEE
Confidence 3477899999999976666676 999999999999999999999999999999999999999987788899999999999
Q ss_pred eeccCCCccCCccccCCCCCcEEEccCCCCCCCCcccc---CCCCCCCeeeccCCcCCCCCChhhhccCCC--CCEEEcc
Q 046589 184 LCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRL---GELTRLQDLDLSDNLLSGSLTVSLFTNLQS--LSYLDVS 258 (729)
Q Consensus 184 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l---~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~--L~~L~Ls 258 (729)
|++|++++..|..|.++++|++|+|++|+++...+..+ ..+++|++|+|++|.++ .++...+..++. |+.|+|+
T Consensus 119 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~~~l~~l~l~ 197 (361)
T 2xot_A 119 LYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK-KLPLTDLQKLPAWVKNGLYLH 197 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC-CCCHHHHHHSCHHHHTTEECC
T ss_pred CCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC-ccCHHHhhhccHhhcceEEec
Confidence 99999998889999999999999999999996544445 67999999999999998 677788888887 4899999
Q ss_pred cccccc
Q 046589 259 NNLLSG 264 (729)
Q Consensus 259 ~N~l~~ 264 (729)
+|.+..
T Consensus 198 ~N~~~C 203 (361)
T 2xot_A 198 NNPLEC 203 (361)
T ss_dssp SSCEEC
T ss_pred CCCccC
Confidence 999874
No 334
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=2.5e-17 Score=160.51 Aligned_cols=153 Identities=17% Similarity=0.251 Sum_probs=88.4
Q ss_pred CCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcE
Q 046589 126 FDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKS 205 (729)
Q Consensus 126 ~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 205 (729)
..+++|++|++++|.++..+ .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..+.++++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLT--GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCT--TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCccChH--HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 34555666666666665432 3555666666666666543 2335566666666666666666555556666666666
Q ss_pred EEccCCCCCCCCccccCCCCCCCeeeccCCc-CCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeeccccc
Q 046589 206 LDFSGNGFNGTVPIRLGELTRLQDLDLSDNL-LSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGIN 284 (729)
Q Consensus 206 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n 284 (729)
|++++|.+++..|..++.+++|++|++++|. ++ .++ .+..+++|++|++++|.+++ ++ .+..+++|+.+++++|
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~--~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM--PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG--GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH--hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCc
Confidence 6666666665555566666666666666665 43 333 35566666666666666653 22 4556666666666666
Q ss_pred ccc
Q 046589 285 QFT 287 (729)
Q Consensus 285 ~l~ 287 (729)
++.
T Consensus 192 ~i~ 194 (197)
T 4ezg_A 192 TIG 194 (197)
T ss_dssp ---
T ss_pred ccC
Confidence 554
No 335
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.71 E-value=7.6e-17 Score=183.44 Aligned_cols=171 Identities=29% Similarity=0.313 Sum_probs=136.8
Q ss_pred cCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEE
Q 046589 104 LLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLS 183 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 183 (729)
+.+++.|+++.+.+.. ++ .+..+++|+.|+|++|.+++.++ +..+++|+.|+|++|++++ +| .++.+++|++|+
T Consensus 42 L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 115 (605)
T 1m9s_A 42 LNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLS 115 (605)
T ss_dssp HTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEE
T ss_pred CCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEE
Confidence 4567788888888764 33 57788889999999998888655 7888889999999998874 33 688888899999
Q ss_pred eeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEccccccc
Q 046589 184 LCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLS 263 (729)
Q Consensus 184 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 263 (729)
|++|.+++ + +.+..+++|+.|+|++|.+++. ..++.+++|+.|+|++|.+++..+ +..+++|+.|+|++|.++
T Consensus 116 Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 116 LEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP---LAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp CTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCC
T ss_pred ecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh---hccCCCCCEEECcCCCCC
Confidence 99998875 3 4588888999999999988854 568888889999999988875433 788888999999998888
Q ss_pred ccCCccccCCCcCCeecccccccccc
Q 046589 264 GNIPPEISHLKKLSDHYLGINQFTGS 289 (729)
Q Consensus 264 ~~~p~~l~~l~~L~~l~l~~n~l~~~ 289 (729)
+. ..+..+++|+.|+++.|.+.+.
T Consensus 189 ~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 189 DL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp BC--GGGTTCTTCSEEECCSEEEECC
T ss_pred CC--hHHccCCCCCEEEccCCcCcCC
Confidence 53 4578888888888888888754
No 336
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.71 E-value=3.6e-18 Score=196.90 Aligned_cols=105 Identities=23% Similarity=0.406 Sum_probs=82.1
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++..............++..|+|||......++.++|||||||++|||++ |+.|+..
T Consensus 516 Dikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 595 (656)
T 2j0j_A 516 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595 (656)
T ss_dssp CCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999999999998765332222233456678999998877888999999999999999997 8888753
Q ss_pred Cc--------------------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 704 KF--------------------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~~--------------------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.- .+ .+++..||..+|++|||+++++
T Consensus 596 ~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~ 643 (656)
T 2j0j_A 596 VKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELK 643 (656)
T ss_dssp CCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 10 01 1799999999999999999863
No 337
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.71 E-value=2.7e-18 Score=191.81 Aligned_cols=102 Identities=24% Similarity=0.412 Sum_probs=83.6
Q ss_pred cccccceEe---cCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILL---NEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill---~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||++ +.++.+|++|||+++...... ......+|++|+|||...+ .++.++||||+||++|||++|+.|+
T Consensus 151 Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf 227 (484)
T 3nyv_A 151 DLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPF 227 (484)
T ss_dssp CCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred CCCHHHEEEecCCCCCcEEEEeeeeeEEccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCC
Confidence 999999999 467899999999998765322 2234578899999998754 6899999999999999999999998
Q ss_pred CCC--------------------cc---h--HHHHhhcccCCCCCCCCccccC
Q 046589 702 GPK--------------------FE---D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~--------------------~~---~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... |. + .+++..|++.+|++|||+++++
T Consensus 228 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l 280 (484)
T 3nyv_A 228 NGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDAL 280 (484)
T ss_dssp CCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 621 11 0 1799999999999999999863
No 338
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.71 E-value=3.5e-18 Score=178.30 Aligned_cols=105 Identities=23% Similarity=0.468 Sum_probs=80.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCC----cceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKS----HISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQ 699 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~----~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~ 699 (729)
|+||+||+++.++.+|++|||+++....... .......++..|+|||.... ..++.++||||+||++|||+||+.
T Consensus 146 dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~ 225 (303)
T 2vwi_A 146 DVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA 225 (303)
T ss_dssp CCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999876543211 11123467889999997654 567899999999999999999999
Q ss_pred CCCCC--c---------------------------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 700 PTGPK--F---------------------------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 700 p~~~~--~---------------------------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|+... . .+ .+++..|+..+|++|||+++++
T Consensus 226 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll 286 (303)
T 2vwi_A 226 PYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286 (303)
T ss_dssp TTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred CCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHh
Confidence 97520 0 00 1689999999999999999874
No 339
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=3.2e-17 Score=159.74 Aligned_cols=152 Identities=16% Similarity=0.232 Sum_probs=132.9
Q ss_pred cCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEE
Q 046589 104 LLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLS 183 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 183 (729)
+.+++.++++++.+. .+| .+..+++|++|++++|.++.. +.+..+++|++|++++|++++..|..++.+++|++|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCC--GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcc--hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 566889999999988 556 688999999999999977653 5789999999999999999988899999999999999
Q ss_pred eeccCCCccCCccccCCCCCcEEEccCCC-CCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccc
Q 046589 184 LCSNSFTGEMPSELGDMKQLKSLDFSGNG-FNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLL 262 (729)
Q Consensus 184 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l 262 (729)
+++|++++..|..+.++++|++|++++|. ++ .+| .+..+++|++|++++|.+++ ++ .+..+++|++|++++|++
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~--~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR--GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT--TGGGCSSCCEEEECBC--
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH--HhccCCCCCEEEeeCccc
Confidence 99999998888999999999999999998 65 556 69999999999999999984 44 578999999999999998
Q ss_pred cc
Q 046589 263 SG 264 (729)
Q Consensus 263 ~~ 264 (729)
.+
T Consensus 194 ~~ 195 (197)
T 4ezg_A 194 GG 195 (197)
T ss_dssp --
T ss_pred CC
Confidence 64
No 340
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.71 E-value=2.6e-18 Score=182.68 Aligned_cols=105 Identities=25% Similarity=0.381 Sum_probs=81.7
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc---ceecccccccccCccccCCC------CCCchhhHHHHHHHHHHHH
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH---ISTDVASAISYVPPEYGRAR------KANERDNIYRFGVVLLELV 695 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~---~~~~~~~~~~y~ape~~~~~------~~~~~~Dv~s~G~vl~el~ 695 (729)
|+||+||+++.++.+|++|||+++........ ......++..|+|||..... .++.++|||||||++|||+
T Consensus 172 Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~ 251 (342)
T 1b6c_B 172 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251 (342)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHH
Confidence 89999999999999999999999876543221 12244688899999977554 2336899999999999999
Q ss_pred hC----------CCCCCCC----------------------cch-----------HHHHhhcccCCCCCCCCccccC
Q 046589 696 IR----------KQPTGPK----------------------FED-----------KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 696 tg----------~~p~~~~----------------------~~~-----------~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|| +.|+... ... .+++.+||+.+|++|||+++|+
T Consensus 252 tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~ 328 (342)
T 1b6c_B 252 RRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 328 (342)
T ss_dssp TTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred hccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHH
Confidence 99 6676421 000 0699999999999999999873
No 341
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.71 E-value=5e-18 Score=173.92 Aligned_cols=99 Identities=18% Similarity=0.363 Sum_probs=79.4
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCC---CchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKA---NERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~---~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++.++.++++||+++..... ....++..|+|||....... +.++|||||||++|||+||+.|+
T Consensus 138 dikp~Nil~~~~~~~~l~~~~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~ 211 (271)
T 3kmu_A 138 ALNSRSVMIDEDMTARISMADVKFSFQS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF 211 (271)
T ss_dssp CCSGGGEEECTTSCEEEEGGGSCCTTSC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTT
T ss_pred CCccceEEEcCCcceeEEeccceeeecc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 9999999999999999999987754322 23456789999998765443 34799999999999999999998
Q ss_pred CCCc---------------------chH--HHHhhcccCCCCCCCCccccC
Q 046589 702 GPKF---------------------EDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~~---------------------~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
...- .+. +++..|++.+|++|||+++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 262 (271)
T 3kmu_A 212 ADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIV 262 (271)
T ss_dssp TTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred cccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 6310 011 799999999999999999873
No 342
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.71 E-value=5e-18 Score=178.97 Aligned_cols=103 Identities=21% Similarity=0.349 Sum_probs=82.3
Q ss_pred cccccceEecCCc---cEEEeecCCccccCCCCCcceecccccccccCcccc---CCCCCCchhhHHHHHHHHHHHHhCC
Q 046589 625 DIKASNILLNEDF---DAKVLDFGLARLISDCKSHISTDVASAISYVPPEYG---RARKANERDNIYRFGVVLLELVIRK 698 (729)
Q Consensus 625 dlk~~nill~~~~---~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~---~~~~~~~~~Dv~s~G~vl~el~tg~ 698 (729)
|+||+||+++.++ .+|++|||+++.... ........++..|+|||.. ....++.++||||+||++|||+||+
T Consensus 139 dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~ 216 (322)
T 2ycf_A 139 DLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 216 (322)
T ss_dssp CCSGGGEEESSSSSSCCEEECCCTTCEECCC--CHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSS
T ss_pred CCCHHHEEEecCCCCCeEEEccCccceeccc--ccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 9999999998655 499999999987542 1122345678999999975 3467789999999999999999999
Q ss_pred CCCCCC----------------cc--------h--HHHHhhcccCCCCCCCCccccC
Q 046589 699 QPTGPK----------------FE--------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 699 ~p~~~~----------------~~--------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.|+... +. + .+++..|+..+|++|||+++++
T Consensus 217 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l 273 (322)
T 2ycf_A 217 PPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 273 (322)
T ss_dssp CSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred CCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHh
Confidence 998521 00 0 1799999999999999999863
No 343
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.71 E-value=1.1e-17 Score=174.01 Aligned_cols=103 Identities=24% Similarity=0.406 Sum_probs=84.1
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccC------CCCCCchhhHHHHHHHHHHHHhCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGR------ARKANERDNIYRFGVVLLELVIRK 698 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~------~~~~~~~~Dv~s~G~vl~el~tg~ 698 (729)
|+||+||+++.++.+|++|||+++...... ......++..|+|||... ...++.++||||+||++|||++|+
T Consensus 149 dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~ 226 (298)
T 1phk_A 149 DLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 226 (298)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred CCCcceEEEcCCCcEEEecccchhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCC
Confidence 999999999999999999999998765322 223456788999999753 456788999999999999999999
Q ss_pred CCCCCC--------------------cc---h--HHHHhhcccCCCCCCCCccccC
Q 046589 699 QPTGPK--------------------FE---D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 699 ~p~~~~--------------------~~---~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.|+... |. + .+++..|+..+|++|||+++++
T Consensus 227 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll 282 (298)
T 1phk_A 227 PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEAL 282 (298)
T ss_dssp CSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHT
T ss_pred CCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHH
Confidence 997521 10 1 1799999999999999999875
No 344
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.71 E-value=4.2e-18 Score=180.01 Aligned_cols=105 Identities=27% Similarity=0.356 Sum_probs=81.7
Q ss_pred cccccceEecC---CccEEEeecCCccccCCCCC-cceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCC
Q 046589 625 DIKASNILLNE---DFDAKVLDFGLARLISDCKS-HISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQ 699 (729)
Q Consensus 625 dlk~~nill~~---~~~~kl~dfgl~~~~~~~~~-~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~ 699 (729)
|+||+||+++. +..+|++|||+++....... .......++.+|+|||......++.++|||||||++|||+| |+.
T Consensus 165 dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~ 244 (327)
T 2yfx_A 165 DIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYM 244 (327)
T ss_dssp CCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred cCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCC
Confidence 99999999984 45799999999876432221 11223456789999998877888999999999999999999 888
Q ss_pred CCCCCcc--------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 700 PTGPKFE--------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 700 p~~~~~~--------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|+...-. . .+++..|++.+|++||++++|+
T Consensus 245 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll 296 (327)
T 2yfx_A 245 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 296 (327)
T ss_dssp SSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCCcCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHH
Confidence 8753110 0 1799999999999999999873
No 345
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.71 E-value=9.2e-17 Score=182.78 Aligned_cols=150 Identities=26% Similarity=0.377 Sum_probs=66.9
Q ss_pred cCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCC
Q 046589 327 LGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLS 406 (729)
Q Consensus 327 l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~ 406 (729)
+..+++|+.|+|++|++.+..+ +..+++|+.|+|++|++.+ +| .+..+++|+.|+|++|.+++. + .+..++
T Consensus 61 l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l-~----~l~~l~ 131 (605)
T 1m9s_A 61 IQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI-N----GLVHLP 131 (605)
T ss_dssp GGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC-G----GGGGCT
T ss_pred HccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC-c----cccCCC
Confidence 4444444555555444443332 4444445555555544442 11 344444444444444444432 1 122334
Q ss_pred CCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCC
Q 046589 407 QLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLS 486 (729)
Q Consensus 407 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs 486 (729)
+|+.|+|++|.+++. ..+..+++|+.|+|++|.+.+..| +..+++|+.|+|++|++++. | .+..+++|+.|+|+
T Consensus 132 ~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~ 205 (605)
T 1m9s_A 132 QLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELF 205 (605)
T ss_dssp TCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECC
T ss_pred ccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEcc
Confidence 444444444444432 334444444444444444443333 44444444444444444432 2 34444444444444
Q ss_pred CCcCc
Q 046589 487 YNNLS 491 (729)
Q Consensus 487 ~N~l~ 491 (729)
+|+++
T Consensus 206 ~N~l~ 210 (605)
T 1m9s_A 206 SQECL 210 (605)
T ss_dssp SEEEE
T ss_pred CCcCc
Confidence 44443
No 346
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.70 E-value=3.4e-18 Score=179.76 Aligned_cols=105 Identities=20% Similarity=0.345 Sum_probs=81.7
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCc--------ceecccccccccCccccCCCC---CCchhhHHHHHHHHHH
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSH--------ISTDVASAISYVPPEYGRARK---ANERDNIYRFGVVLLE 693 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~--------~~~~~~~~~~y~ape~~~~~~---~~~~~Dv~s~G~vl~e 693 (729)
|+||+||+++.++.+|++|||+++........ ......++.+|+|||...... ++.++|||||||++||
T Consensus 159 dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~e 238 (317)
T 2buj_A 159 DLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYA 238 (317)
T ss_dssp CCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHH
T ss_pred CCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHH
Confidence 99999999999999999999998764321100 011234688999999875433 6889999999999999
Q ss_pred HHhCCCCCCC----------------------CcchH--HHHhhcccCCCCCCCCccccC
Q 046589 694 LVIRKQPTGP----------------------KFEDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 694 l~tg~~p~~~----------------------~~~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|++|+.|+.. .+... +++..|++.+|.+|||+++|+
T Consensus 239 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll 298 (317)
T 2buj_A 239 MMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLL 298 (317)
T ss_dssp HHHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHhCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHH
Confidence 9999999741 00111 799999999999999999873
No 347
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.70 E-value=1.6e-17 Score=174.82 Aligned_cols=104 Identities=18% Similarity=0.299 Sum_probs=77.9
Q ss_pred cccccceEecCCccEEEeecCCccccCCCC----CcceecccccccccCccccCC---------CCCCchhhHHHHHHHH
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCK----SHISTDVASAISYVPPEYGRA---------RKANERDNIYRFGVVL 691 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~----~~~~~~~~~~~~y~ape~~~~---------~~~~~~~Dv~s~G~vl 691 (729)
|+||+||+++ ++.+|++|||+++...... ........++..|+|||.... ..++.++|||||||++
T Consensus 155 dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il 233 (319)
T 2y4i_B 155 DLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIW 233 (319)
T ss_dssp CCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHH
T ss_pred CCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHH
Confidence 9999999998 6789999999987643111 111223457889999997653 4578899999999999
Q ss_pred HHHHhCCCCCCCCcc---------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 692 LELVIRKQPTGPKFE---------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 692 ~el~tg~~p~~~~~~---------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|||+||+.|+...-. . .+++..||..+|++|||+++++
T Consensus 234 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~ 294 (319)
T 2y4i_B 234 YELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLM 294 (319)
T ss_dssp HHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHH
T ss_pred HHHHhCCCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHH
Confidence 999999999863110 1 1899999999999999999873
No 348
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.70 E-value=1.4e-17 Score=186.76 Aligned_cols=102 Identities=26% Similarity=0.394 Sum_probs=83.9
Q ss_pred cccccceEecCCc---cEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNEDF---DAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~---~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++.++ .+|++|||+++..... .......++++|+|||... ..++.++||||+||++|||++|+.|+
T Consensus 171 Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf 247 (504)
T 3q5i_A 171 DIKPENILLENKNSLLNIKIVDFGLSSFFSKD--YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPF 247 (504)
T ss_dssp CCSGGGEEESSTTCCSSEEECCCTTCEECCTT--SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred CCcHHHEEEecCCCCccEEEEECCCCEEcCCC--CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCC
Confidence 9999999998665 7999999999876532 2233457889999999875 56899999999999999999999998
Q ss_pred CCCcc-----------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 702 GPKFE-----------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~~~-----------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
...-. + .+++..|+..+|.+|||++|++
T Consensus 248 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l 300 (504)
T 3q5i_A 248 GGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEAL 300 (504)
T ss_dssp CCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 63110 0 1799999999999999999863
No 349
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.70 E-value=1.1e-17 Score=175.86 Aligned_cols=105 Identities=20% Similarity=0.280 Sum_probs=81.7
Q ss_pred cccccceEec-CCccEEEeecCCccccCCCCC--cceecccccccccCccccCC-CCCCchhhHHHHHHHHHHHHhCCCC
Q 046589 625 DIKASNILLN-EDFDAKVLDFGLARLISDCKS--HISTDVASAISYVPPEYGRA-RKANERDNIYRFGVVLLELVIRKQP 700 (729)
Q Consensus 625 dlk~~nill~-~~~~~kl~dfgl~~~~~~~~~--~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~vl~el~tg~~p 700 (729)
|+||+||+++ .++.+|++|||+++....... .......++.+|+|||.... ..++.++|||||||++|||+||+.|
T Consensus 145 dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~p 224 (320)
T 2i6l_A 145 DLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTL 224 (320)
T ss_dssp CCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCC
Confidence 9999999997 567999999999987542211 11223456788999997644 6789999999999999999999999
Q ss_pred CCCCc-------------------------------------------------ch--HHHHhhcccCCCCCCCCccccC
Q 046589 701 TGPKF-------------------------------------------------ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 701 ~~~~~-------------------------------------------------~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+.... .+ .+++.+|++.+|++|||+++++
T Consensus 225 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 304 (320)
T 2i6l_A 225 FAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEAL 304 (320)
T ss_dssp SCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred CCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHh
Confidence 86311 00 1799999999999999999873
No 350
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.70 E-value=6.3e-18 Score=174.80 Aligned_cols=100 Identities=15% Similarity=0.233 Sum_probs=79.3
Q ss_pred cccccceEecC-------------------CccEEEeecCCccccCCCCCcceecccccccccCccccCCC-CCCchhhH
Q 046589 625 DIKASNILLNE-------------------DFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRAR-KANERDNI 684 (729)
Q Consensus 625 dlk~~nill~~-------------------~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~-~~~~~~Dv 684 (729)
|+||+||+++. ...+|++|||.++...... ...++..|+|||..... .++.++||
T Consensus 140 Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di 214 (289)
T 1x8b_A 140 DIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADI 214 (289)
T ss_dssp CCSGGGEEEC--------------------CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHH
T ss_pred CCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhH
Confidence 99999999984 4478999999998765321 23578899999987654 56689999
Q ss_pred HHHHHHHHHHHhCCCCCCCC-----------------cchH--HHHhhcccCCCCCCCCccccC
Q 046589 685 YRFGVVLLELVIRKQPTGPK-----------------FEDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 685 ~s~G~vl~el~tg~~p~~~~-----------------~~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
|||||++||+++|+.|+... +.+. +++..|++.+|++|||+++++
T Consensus 215 ~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll 278 (289)
T 1x8b_A 215 FALALTVVCAAGAEPLPRNGDQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALV 278 (289)
T ss_dssp HHHHHHHHHHTTCCCCCSSSHHHHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHHHHHhcCCCCCcchhHHHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHh
Confidence 99999999999998765411 1111 899999999999999999874
No 351
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.70 E-value=8.9e-18 Score=180.83 Aligned_cols=74 Identities=22% Similarity=0.267 Sum_probs=62.6
Q ss_pred cccccceEec------CCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCC
Q 046589 625 DIKASNILLN------EDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRK 698 (729)
Q Consensus 625 dlk~~nill~------~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~ 698 (729)
|+||+||+++ ..+.+|++|||+++..... .....+|.+|+|||...+..++.++||||+||++|||+||+
T Consensus 157 Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 232 (373)
T 1q8y_A 157 DIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232 (373)
T ss_dssp CCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CCChHHeEEeccCCCcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCC
Confidence 9999999994 4458999999999875431 23346789999999888888899999999999999999999
Q ss_pred CCCC
Q 046589 699 QPTG 702 (729)
Q Consensus 699 ~p~~ 702 (729)
.|+.
T Consensus 233 ~pf~ 236 (373)
T 1q8y_A 233 FLFE 236 (373)
T ss_dssp CCC-
T ss_pred CCCC
Confidence 9986
No 352
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.70 E-value=3.4e-18 Score=180.69 Aligned_cols=105 Identities=26% Similarity=0.405 Sum_probs=83.7
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcc--eecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHI--STDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~--~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++......... .....++..|+|||......++.++||||+||++|||+||+.|+.
T Consensus 170 dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~ 249 (326)
T 2w1i_A 170 DLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 249 (326)
T ss_dssp CCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred CCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCC
Confidence 999999999999999999999998765332211 112355677999998877778899999999999999999987754
Q ss_pred CC------------------------------------cchH--HHHhhcccCCCCCCCCccccC
Q 046589 703 PK------------------------------------FEDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~------------------------------------~~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. +... +++..||+.+|++|||+++|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~ 314 (326)
T 2w1i_A 250 SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 314 (326)
T ss_dssp SHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred CCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 10 0011 799999999999999999873
No 353
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.70 E-value=3.3e-18 Score=185.80 Aligned_cols=102 Identities=19% Similarity=0.293 Sum_probs=81.9
Q ss_pred cccccceEe----cCCccEEEeecCCccccCCCCCcceecccccccccCccccCC--------CCCCchhhHHHHHHHHH
Q 046589 625 DIKASNILL----NEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA--------RKANERDNIYRFGVVLL 692 (729)
Q Consensus 625 dlk~~nill----~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~--------~~~~~~~Dv~s~G~vl~ 692 (729)
|+||+||++ +.++.+|++|||+++..... .......++..|+|||.... ..++.++|||||||++|
T Consensus 137 Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~ 214 (396)
T 4eut_A 137 NIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD--EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFY 214 (396)
T ss_dssp CCCGGGEEEEECTTSCEEEEECCGGGCEECCCG--GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHEEEeecCCCceeEEEecCCCceEccCC--CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHH
Confidence 999999999 78889999999999876432 22234568899999997643 45678999999999999
Q ss_pred HHHhCCCCCCC-C---------------------------------cc----------h------HHHHhhcccCCCCCC
Q 046589 693 ELVIRKQPTGP-K---------------------------------FE----------D------KDIVVGCVSDNPIAK 722 (729)
Q Consensus 693 el~tg~~p~~~-~---------------------------------~~----------~------~~l~~~c~~~~p~~R 722 (729)
||+||+.|+.. . |. . .+++..|++.+|++|
T Consensus 215 el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R 294 (396)
T 4eut_A 215 HAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKC 294 (396)
T ss_dssp HHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTS
T ss_pred HHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhh
Confidence 99999999742 0 00 0 068899999999999
Q ss_pred CCcccc
Q 046589 723 PGMLRV 728 (729)
Q Consensus 723 p~~~~v 728 (729)
|+++++
T Consensus 295 ~s~~e~ 300 (396)
T 4eut_A 295 WGFDQF 300 (396)
T ss_dssp CCHHHH
T ss_pred ccHHHH
Confidence 999886
No 354
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.70 E-value=7.7e-18 Score=176.65 Aligned_cols=102 Identities=25% Similarity=0.469 Sum_probs=83.4
Q ss_pred cccccceEec-CCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCC-CchhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLN-EDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKA-NERDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~-~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~-~~~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+|++||+++ .++.+|++|||+++..... ......++.+|+|||......+ +.++||||+||++|||+||+.|+.
T Consensus 164 dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 240 (312)
T 2iwi_A 164 DIKDENILIDLRRGCAKLIDFGSGALLHDE---PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE 240 (312)
T ss_dssp CCSGGGEEEETTTTEEEECCCSSCEECCSS---CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CCChhhEEEeCCCCeEEEEEcchhhhcccC---cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCC
Confidence 9999999999 8899999999999876532 1234567889999997765555 458999999999999999999986
Q ss_pred C-------------Ccch--HHHHhhcccCCCCCCCCccccC
Q 046589 703 P-------------KFED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~-------------~~~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
. .+.. .+++.+|++.+|++|||++|++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l 282 (312)
T 2iwi_A 241 RDQEILEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282 (312)
T ss_dssp SHHHHHHTCCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred ChHHHhhhccCCcccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 2 1111 1899999999999999999874
No 355
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.70 E-value=3.3e-20 Score=209.91 Aligned_cols=105 Identities=19% Similarity=0.190 Sum_probs=57.2
Q ss_pred cCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCc-cccccccCCC
Q 046589 327 LGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTI-EDVFGRCTNL 405 (729)
Q Consensus 327 l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~~~~l 405 (729)
++.+++|+.|+|++|++. .+|..++.+++|++|+|++|++++ +| .+..+++|+.|+|++|.+++.+ |..+ ..+
T Consensus 459 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l---~~l 532 (567)
T 1dce_A 459 LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPL---VSC 532 (567)
T ss_dssp GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGG---GGC
T ss_pred ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHH---hcC
Confidence 344445555555555555 445555555666666666666654 34 5555666666666666665554 4443 234
Q ss_pred CCCcEEEcCCCcCcccCCc---ccCCCCCCCEEEc
Q 046589 406 SQLEKLDLSSNMLTGRIPK---EIGNLRSIQILKL 437 (729)
Q Consensus 406 ~~L~~L~Ls~N~l~~~~p~---~l~~l~~L~~L~L 437 (729)
++|+.|+|++|.+++.+|. .+..+++|+.|++
T Consensus 533 ~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 533 PRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp TTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 4566666666666654332 1233566666653
No 356
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.69 E-value=1e-17 Score=180.37 Aligned_cols=105 Identities=13% Similarity=0.133 Sum_probs=88.2
Q ss_pred eeeccccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCC--CCCCchhhHHHHHHHHHHHHhCC
Q 046589 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRA--RKANERDNIYRFGVVLLELVIRK 698 (729)
Q Consensus 621 avk~dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~--~~~~~~~Dv~s~G~vl~el~tg~ 698 (729)
+||||+||+||+++.++.+||+|||+|+.... ......++.+|+|||.... ..++.++|||||||++|||+||+
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~ 290 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF 290 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCC
Confidence 78999999999999999999999999987532 1223455689999998876 67899999999999999999999
Q ss_pred CCCCCCc-------c---------------------hH--HHHhhcccCCCCCCCCccccC
Q 046589 699 QPTGPKF-------E---------------------DK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 699 ~p~~~~~-------~---------------------~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.|+...+ . +. +++..|++.+|++|||+++++
T Consensus 291 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l 351 (371)
T 3q60_A 291 LPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAM 351 (371)
T ss_dssp CSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHT
T ss_pred CCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 9976321 0 00 799999999999999999875
No 357
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.69 E-value=5.4e-17 Score=184.17 Aligned_cols=103 Identities=18% Similarity=0.310 Sum_probs=81.7
Q ss_pred cccccceEecCCc---cEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNEDF---DAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~~---~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++.++ .+|++|||+++...... ......++.+|+|||...+..++.++||||+||++||++||+.|+
T Consensus 146 DLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf 223 (676)
T 3qa8_A 146 DLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223 (676)
T ss_dssp CCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSC
T ss_pred CCCHHHeEeecCCCceeEEEccccccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCC
Confidence 9999999999665 49999999998765322 223457889999999988888999999999999999999999998
Q ss_pred CCCcc-------------------------------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 702 GPKFE-------------------------------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~~~-------------------------------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
...+. + .+++..|+..+|++|||+++++
T Consensus 224 ~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 224 LPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp CSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred CcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 42100 0 0799999999999999998864
No 358
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.68 E-value=7.9e-18 Score=177.89 Aligned_cols=103 Identities=25% Similarity=0.415 Sum_probs=81.6
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVI-RKQPTGP 703 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~ 703 (729)
|+||+||+++.++.+|++|||+++...... ......++..|+|||......++.++||||+||++|||+| |+.|+..
T Consensus 167 dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~ 244 (327)
T 1fvr_A 167 DLAARNILVGENYVAKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 244 (327)
T ss_dssp CCSGGGEEECGGGCEEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CCccceEEEcCCCeEEEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCC
Confidence 999999999999999999999987533211 1122345678999998877778999999999999999998 9999753
Q ss_pred Cc--------------------chH--HHHhhcccCCCCCCCCccccC
Q 046589 704 KF--------------------EDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 704 ~~--------------------~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.- .+. +++.+|++.+|++|||+++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 292 (327)
T 1fvr_A 245 MTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 292 (327)
T ss_dssp CCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CcHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 10 011 799999999999999999863
No 359
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.68 E-value=6.4e-17 Score=165.16 Aligned_cols=166 Identities=25% Similarity=0.249 Sum_probs=132.7
Q ss_pred EEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeecc
Q 046589 108 VYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSN 187 (729)
Q Consensus 108 ~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N 187 (729)
..++++.+.+.+.. .+.++++|++|++++|.++... .+..+++|++|+|++|++++. |. +..+++|++|+|++|
T Consensus 22 ~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N 95 (263)
T 1xeu_A 22 VKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSLA--GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRN 95 (263)
T ss_dssp HHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSS
T ss_pred HHHHhcCCCccccc--chhhcCcCcEEECcCCCcccch--HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCC
Confidence 34556677776433 4677889999999999988754 678889999999999999854 44 889999999999999
Q ss_pred CCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCC
Q 046589 188 SFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIP 267 (729)
Q Consensus 188 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 267 (729)
++++ +|.. .. ++|++|++++|++++ ++ .+..+++|++|++++|++++ ++ .+..+++|++|++++|.+++.
T Consensus 96 ~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~-~~--~l~~l~~L~~L~L~~N~i~~~-- 165 (263)
T 1xeu_A 96 RLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKS-IV--MLGFLSKLEVLDLHGNEITNT-- 165 (263)
T ss_dssp CCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCB-CG--GGGGCTTCCEEECTTSCCCBC--
T ss_pred ccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCC-Ch--HHccCCCCCEEECCCCcCcch--
Confidence 9985 4433 33 889999999999885 33 58889999999999999874 43 578899999999999999865
Q ss_pred ccccCCCcCCeecccccccccc
Q 046589 268 PEISHLKKLSDHYLGINQFTGS 289 (729)
Q Consensus 268 ~~l~~l~~L~~l~l~~n~l~~~ 289 (729)
..+..+++|+.+++++|.+++.
T Consensus 166 ~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TTSTTCCCCCEEEEEEEEEECC
T ss_pred HHhccCCCCCEEeCCCCcccCC
Confidence 6788888999999998887644
No 360
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.68 E-value=2.2e-17 Score=170.95 Aligned_cols=102 Identities=27% Similarity=0.432 Sum_probs=81.1
Q ss_pred cccccceEecCC---ccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNED---FDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~~---~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++.+ ..+|++|||+++...... ......++..|+|||...+ .++.++||||+||++|||+||+.|+
T Consensus 146 dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~ 222 (287)
T 2wei_A 146 DLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPF 222 (287)
T ss_dssp CCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred CCChhhEEEecCCCcccEEEeccCcceeecCCC--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCC
Confidence 999999999753 479999999988754321 1223457789999997754 4789999999999999999999997
Q ss_pred CCC--------------------c---ch--HHHHhhcccCCCCCCCCccccC
Q 046589 702 GPK--------------------F---ED--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~--------------------~---~~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... | .+ .+++..|+..+|++|||+++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 275 (287)
T 2wei_A 223 YGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCL 275 (287)
T ss_dssp CCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHh
Confidence 521 0 01 1799999999999999999873
No 361
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.68 E-value=4.3e-17 Score=173.68 Aligned_cols=102 Identities=23% Similarity=0.373 Sum_probs=84.3
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCC-CCCc-hhhHHHHHHHHHHHHhCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRAR-KANE-RDNIYRFGVVLLELVIRKQPTG 702 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~-~~~~-~~Dv~s~G~vl~el~tg~~p~~ 702 (729)
|+||+||+++.++.+|++|||+++..... ......++..|+|||..... .++. ++||||+||++|||+||+.|+.
T Consensus 177 dl~p~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 253 (348)
T 2pml_X 177 DVKPSNILMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253 (348)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCChHhEEEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999875432 23345778899999988765 5666 9999999999999999999975
Q ss_pred CC----------------cc-----------------------h--HHHHhhcccCCCCCCCCccccC
Q 046589 703 PK----------------FE-----------------------D--KDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 703 ~~----------------~~-----------------------~--~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
.. +. . .+++..|++.+|++|||++|++
T Consensus 254 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l 321 (348)
T 2pml_X 254 LKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDAL 321 (348)
T ss_dssp CSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred CCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 21 11 1 1799999999999999999874
No 362
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.68 E-value=2.4e-17 Score=171.71 Aligned_cols=105 Identities=27% Similarity=0.465 Sum_probs=75.7
Q ss_pred cccccceEecCCccEEEeecCCccccCCCC-------------CcceecccccccccCccccCC-CCCCchhhHHHHHHH
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCK-------------SHISTDVASAISYVPPEYGRA-RKANERDNIYRFGVV 690 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~-------------~~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~s~G~v 690 (729)
|+||+||+++.++.+|++|||+++...... ........++..|+|||.... ..++.++||||+||+
T Consensus 141 dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~i 220 (303)
T 1zy4_A 141 DLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGII 220 (303)
T ss_dssp CCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHH
T ss_pred cCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHH
Confidence 999999999999999999999998654211 011223467889999998764 468999999999999
Q ss_pred HHHHHhCCCCCC-----------------CCcc------hHHHHhhcccCCCCCCCCccccC
Q 046589 691 LLELVIRKQPTG-----------------PKFE------DKDIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 691 l~el~tg~~p~~-----------------~~~~------~~~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
+|||+++..+.. ..+. -.+++.+|++.+|++|||+++++
T Consensus 221 l~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll 282 (303)
T 1zy4_A 221 FFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLL 282 (303)
T ss_dssp HHHHHSCCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHhccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHh
Confidence 999998332110 0111 12799999999999999999874
No 363
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=2.8e-16 Score=152.31 Aligned_cols=132 Identities=23% Similarity=0.217 Sum_probs=95.9
Q ss_pred EEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcc-cccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeec
Q 046589 108 VYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSP-QVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCS 186 (729)
Q Consensus 108 ~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~ 186 (729)
+.++++++.++ .+|..+.. +|++|++++|.+++..+. .|+.+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 35677777774 46654443 777777777777776654 467777777777777777777777777777777777777
Q ss_pred cCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCC
Q 046589 187 NSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLT 242 (729)
Q Consensus 187 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 242 (729)
|++++..|..|.++++|++|+|++|++++..|..+..+++|++|++++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 77777777777777777777777777777777777777777777777777765544
No 364
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.67 E-value=1.4e-17 Score=194.32 Aligned_cols=182 Identities=23% Similarity=0.272 Sum_probs=104.7
Q ss_pred CcEEEEcCCCCCcCcCCccCCCCCCC-----cEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCc
Q 046589 106 RVVYQVLRTQSLKGPVSPLLFDLSKL-----RVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLE 180 (729)
Q Consensus 106 ~~~~l~l~~~~l~~~~~~~l~~L~~L-----~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~ 180 (729)
++..++|..+.+.. .+..+.....| ..++++.|.+. .++..|..++.|+.|+|++|.+. .+|..+..+++|+
T Consensus 174 ~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~ 250 (727)
T 4b8c_D 174 LTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLT 250 (727)
T ss_dssp --------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCS
T ss_pred ccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCC
Confidence 45666666666654 22222221112 22223333333 34666777888888888888887 6777777888888
Q ss_pred EEEeeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccc
Q 046589 181 TLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNN 260 (729)
Q Consensus 181 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N 260 (729)
+|+|++|.++ .+|..|+++++|++|+|++|.|+ .+|..|+.+++|++|+|++|.++ .+|. .|..+++|++|+|++|
T Consensus 251 ~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~-~~~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 251 RLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPW-EFGNLCNLQFLGVEGN 326 (727)
T ss_dssp CCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCS-STTSCTTCCCEECTTS
T ss_pred EEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccCh-hhhcCCCccEEeCCCC
Confidence 8888888887 77888888888888888888887 67888888888888888888886 6663 3778888888888888
Q ss_pred cccccCCccccCCCcC-Ceeccccccccccccccc
Q 046589 261 LLSGNIPPEISHLKKL-SDHYLGINQFTGSIQSEL 294 (729)
Q Consensus 261 ~l~~~~p~~l~~l~~L-~~l~l~~n~l~~~~~~~l 294 (729)
.+++.+|..+..+... ..++++.|.+++.+|..+
T Consensus 327 ~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l 361 (727)
T 4b8c_D 327 PLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHER 361 (727)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-
T ss_pred ccCCCChHHHhhcchhhhHHhhccCcccCcCcccc
Confidence 8887777766544221 235667777776666544
No 365
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.67 E-value=1.3e-17 Score=194.57 Aligned_cols=121 Identities=26% Similarity=0.412 Sum_probs=74.8
Q ss_pred CcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCc
Q 046589 371 IPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRL 450 (729)
Q Consensus 371 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 450 (729)
.|..+..+..|+.|+|++|.+...++..+ .+++|++|+|++|.|+ .+|..|+++++|++|+|++|.|+ .+|..+
T Consensus 216 ~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~----~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~ 289 (727)
T 4b8c_D 216 PKDSKYDDQLWHALDLSNLQIFNISANIF----KYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAEL 289 (727)
T ss_dssp ------CCCCCCEEECTTSCCSCCCGGGG----GCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSG
T ss_pred ChhhhccCCCCcEEECCCCCCCCCChhhc----CCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhh
Confidence 45556666666667776666664333332 3556666777777766 56666666777777777777766 566666
Q ss_pred cCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCcccccccc
Q 046589 451 GDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLSRPILSKH 498 (729)
Q Consensus 451 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~~~~~~ 498 (729)
+.+++|++|+|++|.|+ .+|..|..+++|+.|+|++|+|++.+|..+
T Consensus 290 ~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 290 GSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336 (727)
T ss_dssp GGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHH
T ss_pred cCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHH
Confidence 66777777777777665 556666667777777777777766555443
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.67 E-value=8.4e-19 Score=198.38 Aligned_cols=84 Identities=27% Similarity=0.412 Sum_probs=41.6
Q ss_pred CCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccC-chhhhcCCCCCEEe
Q 046589 406 SQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSI-PEKIADLAQLQFLD 484 (729)
Q Consensus 406 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~Ld 484 (729)
++|+.|+|++|+++ .+|..++.+++|+.|+|++|.+++ +| .++.+++|+.|+|++|++++.. |..+..+++|+.|+
T Consensus 463 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 463 LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred ccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 34444444444444 344444555555555555555543 33 4445555555555555555443 55555555555555
Q ss_pred CCCCcCcc
Q 046589 485 LSYNNLSR 492 (729)
Q Consensus 485 Ls~N~l~~ 492 (729)
|++|++++
T Consensus 540 L~~N~l~~ 547 (567)
T 1dce_A 540 LQGNSLCQ 547 (567)
T ss_dssp CTTSGGGG
T ss_pred ecCCcCCC
Confidence 55555544
No 367
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=3.5e-16 Score=148.17 Aligned_cols=132 Identities=27% Similarity=0.291 Sum_probs=99.5
Q ss_pred CCCcEEECCCCCCC-CCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEE
Q 046589 129 SKLRVLNLSQNLLF-GQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLD 207 (729)
Q Consensus 129 ~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 207 (729)
++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 67888888888877 55566677788888888888887754 6777888888888888888766777777788888888
Q ss_pred ccCCCCCCCC-ccccCCCCCCCeeeccCCcCCCCCCh---hhhccCCCCCEEEccccccc
Q 046589 208 FSGNGFNGTV-PIRLGELTRLQDLDLSDNLLSGSLTV---SLFTNLQSLSYLDVSNNLLS 263 (729)
Q Consensus 208 Ls~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~~~---~~~~~l~~L~~L~Ls~N~l~ 263 (729)
+++|.+++.. +..+..+++|++|++++|.++ .++. ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~-~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVT-NLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGG-TSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCc-chHHHHHHHHHhCccCcEecCCCCChh
Confidence 8888887432 267778888888888888877 3443 46777888888888887765
No 368
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.64 E-value=7.8e-16 Score=149.19 Aligned_cols=131 Identities=24% Similarity=0.315 Sum_probs=108.1
Q ss_pred cEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCc-cccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccC
Q 046589 132 RVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPS-QLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSG 210 (729)
Q Consensus 132 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 210 (729)
+++++++|+++.++. .+. .+|++|+|++|++++..+. .|+.+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~~ip~-~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPR-DIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSSCCS-CCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCcCcc-CCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 789999999876543 332 2889999999999865554 488899999999999999988888999999999999999
Q ss_pred CCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccC
Q 046589 211 NGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNI 266 (729)
Q Consensus 211 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 266 (729)
|++++..|..|..+++|++|+|++|++++..+ ..|..+++|++|++++|.+.+..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMP-GSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECT-TSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCH-HHhhcCCCCCEEEeCCCCccCcC
Confidence 99988888888889999999999998885444 67788888899999888887643
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.63 E-value=1.6e-15 Score=154.74 Aligned_cols=148 Identities=23% Similarity=0.309 Sum_probs=129.5
Q ss_pred cCCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEE
Q 046589 104 LLRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLS 183 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 183 (729)
+.+++.+++++|.++. ++ .+..+++|++|+|++|++++..+ +.++++|++|+|++|++++ +|.. .. ++|++|+
T Consensus 40 l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~ 112 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLF 112 (263)
T ss_dssp HTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEE
T ss_pred cCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEE
Confidence 5678999999999884 55 68899999999999999998765 8999999999999999985 5543 33 9999999
Q ss_pred eeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEccccccc
Q 046589 184 LCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLS 263 (729)
Q Consensus 184 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 263 (729)
|++|++++ + +.+.++++|++|++++|++++. + .++.+++|++|++++|.+++. ..+..+++|++|++++|.+.
T Consensus 113 L~~N~l~~-~-~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~---~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 113 LDNNELRD-T-DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT---GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp CCSSCCSB-S-GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC---TTSTTCCCCCEEEEEEEEEE
T ss_pred ccCCccCC-C-hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch---HHhccCCCCCEEeCCCCccc
Confidence 99999985 3 4699999999999999999854 4 689999999999999999854 56889999999999999998
Q ss_pred cc
Q 046589 264 GN 265 (729)
Q Consensus 264 ~~ 265 (729)
+.
T Consensus 186 ~~ 187 (263)
T 1xeu_A 186 NE 187 (263)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 370
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=1.8e-15 Score=143.15 Aligned_cols=135 Identities=23% Similarity=0.208 Sum_probs=120.5
Q ss_pred CCCCCCEEeccCCcCc-ccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCe
Q 046589 151 NLKRLKMLSLGENQLS-GSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQD 229 (729)
Q Consensus 151 ~l~~L~~L~Ls~N~l~-~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 229 (729)
..++|++|++++|+++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3578999999999998 78899999999999999999999865 78999999999999999999878888888999999
Q ss_pred eeccCCcCCCCCChhhhccCCCCCEEEcccccccccCC---ccccCCCcCCeecccccccc
Q 046589 230 LDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIP---PEISHLKKLSDHYLGINQFT 287 (729)
Q Consensus 230 L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~l~l~~n~l~ 287 (729)
|++++|.+++......+..+++|++|++++|.+++..+ ..+..+++|+.++++.|.+.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 99999999843233678999999999999999996655 48899999999999998775
No 371
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=3.2e-15 Score=144.95 Aligned_cols=128 Identities=26% Similarity=0.293 Sum_probs=88.9
Q ss_pred cEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCC
Q 046589 132 RVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGN 211 (729)
Q Consensus 132 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 211 (729)
+++++++|+++.++.. + .++|++|+|++|+|+ .+|..|..+++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~~ip~~-~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKG-I--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCSSCCSC-C--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCCcCCCC-C--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 4666777766654432 2 246777777777776 56677777777777777777777666666777777777777777
Q ss_pred CCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccc
Q 046589 212 GFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSG 264 (729)
Q Consensus 212 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 264 (729)
.+++..|..|..+++|++|+|++|.++ .++...|..+++|+.|++++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCC-eeChhhhhcCccccEEEeCCCCeec
Confidence 777666667777777777777777776 4555667777777777777777653
No 372
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=4.9e-16 Score=143.97 Aligned_cols=127 Identities=26% Similarity=0.317 Sum_probs=76.3
Q ss_pred CCCcEEECCCCCCC-CCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEE
Q 046589 129 SKLRVLNLSQNLLF-GQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLD 207 (729)
Q Consensus 129 ~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 207 (729)
++|++|++++|.++ +..|..+..+++|++|++++|.+++. ..++.+++|++|++++|.+++.+|..+.++++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45666666666665 44555556666666666666666543 5566666666666666666655565555666666666
Q ss_pred ccCCCCCCC-CccccCCCCCCCeeeccCCcCCCCCCh---hhhccCCCCCEEEcc
Q 046589 208 FSGNGFNGT-VPIRLGELTRLQDLDLSDNLLSGSLTV---SLFTNLQSLSYLDVS 258 (729)
Q Consensus 208 Ls~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~~~---~~~~~l~~L~~L~Ls 258 (729)
+++|.+++. .+..++.+++|++|++++|.+++ ++. ..+..+++|++||++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTN-LNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGG-STTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccc-hHHHHHHHHHHCCCcccccCC
Confidence 666666542 23556666666666666666653 332 345666666666654
No 373
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.61 E-value=2.2e-16 Score=183.66 Aligned_cols=96 Identities=20% Similarity=0.346 Sum_probs=78.3
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK 704 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~ 704 (729)
|+||+||+++.+ .+||+|||+++..... ....+|.+|+|||..... .+.++|||||||++|||++|..|+...
T Consensus 207 Dlkp~NIll~~~-~~kl~DFG~a~~~~~~-----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~ 279 (681)
T 2pzi_A 207 DLKPENIMLTEE-QLKLIDLGAVSRINSF-----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGR 279 (681)
T ss_dssp CCSGGGEEECSS-CEEECCCTTCEETTCC-----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTE
T ss_pred ccChHHeEEeCC-cEEEEecccchhcccC-----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccc
Confidence 999999999976 8999999999875432 345688999999977544 488999999999999999998886531
Q ss_pred cc-------h--------HHHHhhcccCCCCCCCCccc
Q 046589 705 FE-------D--------KDIVVGCVSDNPIAKPGMLR 727 (729)
Q Consensus 705 ~~-------~--------~~l~~~c~~~~p~~Rp~~~~ 727 (729)
+. . .+++.+|+..+|++||+..+
T Consensus 280 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~ 317 (681)
T 2pzi_A 280 YVDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAE 317 (681)
T ss_dssp ECSSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHH
T ss_pred ccccccccccccccCHHHHHHHhhhccCChhhCCCHHH
Confidence 11 0 17999999999999997654
No 374
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=2.5e-16 Score=166.50 Aligned_cols=101 Identities=13% Similarity=0.084 Sum_probs=53.2
Q ss_pred CCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCC-EEEccCCccccccCcCccCCCCCC
Q 046589 379 ESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQ-ILKLNSNFFNGSIPMRLGDSTSLN 457 (729)
Q Consensus 379 ~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~ 457 (729)
++|+.++|++|.++.+.+..| .++++|+.++|.+| ++...+..|.++++|+ .+++.+ .++..-+.+|.++++|+
T Consensus 226 ~~L~~l~L~~n~i~~I~~~aF---~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~ 300 (329)
T 3sb4_A 226 PNLVSLDISKTNATTIPDFTF---AQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLR 300 (329)
T ss_dssp TTCCEEECTTBCCCEECTTTT---TTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEE
T ss_pred CCCeEEECCCCCcceecHhhh---hCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCC
Confidence 444444444444443333333 22334455555554 4444445556666666 666655 44434445566666666
Q ss_pred EEEcccccCCccCchhhhcCCCCCEEe
Q 046589 458 ILELGNNNLNGSIPEKIADLAQLQFLD 484 (729)
Q Consensus 458 ~L~Ls~N~l~~~~p~~l~~l~~L~~Ld 484 (729)
.+++++|+++...+..|.++++|+.++
T Consensus 301 ~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 301 YVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEEeCCCccCccchhhhcCCcchhhhc
Confidence 666666666655555666666666554
No 375
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=8.2e-15 Score=139.94 Aligned_cols=129 Identities=22% Similarity=0.223 Sum_probs=68.4
Q ss_pred cEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCC
Q 046589 132 RVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGN 211 (729)
Q Consensus 132 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 211 (729)
+.+++++|+++..+... .++|++|++++|++++..+..++.+++|++|++++|++++..+..|.++++|++|++++|
T Consensus 10 ~~l~~~~~~l~~~p~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTSVPTGI---PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSSCCTTC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCccCCCCC---CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 44555555554433211 234555555555555444444555555555555555555444444555555555555555
Q ss_pred CCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccc
Q 046589 212 GFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSG 264 (729)
Q Consensus 212 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 264 (729)
.+++..+..+..+++|++|++++|.++ .++...|..+++|++|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeec
Confidence 555444444555555666666655555 3443445555666666666665554
No 376
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.59 E-value=9.9e-15 Score=141.43 Aligned_cols=130 Identities=22% Similarity=0.240 Sum_probs=115.4
Q ss_pred EEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccC
Q 046589 109 YQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNS 188 (729)
Q Consensus 109 ~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~ 188 (729)
.++++++.++ .+|..+. ++|++|+|++|.++.+ |..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~i-p~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTLV-PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCSC-CGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCchh-HHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 5788888887 5666553 6899999999999865 4789999999999999999998888899999999999999999
Q ss_pred CCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCC
Q 046589 189 FTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLT 242 (729)
Q Consensus 189 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 242 (729)
+++..|..|.++++|++|+|++|.++...+..|..+++|++|++++|.+.....
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 998888899999999999999999997666679999999999999999875433
No 377
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=9.8e-15 Score=139.39 Aligned_cols=132 Identities=25% Similarity=0.217 Sum_probs=115.1
Q ss_pred EEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeecc
Q 046589 108 VYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSN 187 (729)
Q Consensus 108 ~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N 187 (729)
..++++++.+. .+|..+ .++|++|++++|++++.++..|..+++|++|++++|++++..+..++.+++|++|++++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 35777778776 355443 379999999999999988888999999999999999999777777899999999999999
Q ss_pred CCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCC
Q 046589 188 SFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLT 242 (729)
Q Consensus 188 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 242 (729)
++++..+..+.++++|++|++++|.+++..+..+..+++|++|++++|.+.+..+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9998777788999999999999999996666667899999999999999986554
No 378
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=1.7e-15 Score=140.28 Aligned_cols=130 Identities=23% Similarity=0.232 Sum_probs=114.7
Q ss_pred CCCCCCEEeccCCcCc-ccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCe
Q 046589 151 NLKRLKMLSLGENQLS-GSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQD 229 (729)
Q Consensus 151 ~l~~L~~L~Ls~N~l~-~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 229 (729)
..++|+.|++++|.++ +.+|..++.+++|++|++++|.+++. ..+.++++|++|++++|.+++.+|..++.+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3468999999999998 78999999999999999999999865 78999999999999999999878988888999999
Q ss_pred eeccCCcCCCCCChhhhccCCCCCEEEcccccccccCC---ccccCCCcCCeeccc
Q 046589 230 LDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIP---PEISHLKKLSDHYLG 282 (729)
Q Consensus 230 L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~l~l~ 282 (729)
|++++|.+++......+..+++|++|++++|.+++..+ ..+..+++|+.++++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 99999999842223678999999999999999997665 578889999988765
No 379
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.58 E-value=9.5e-16 Score=162.03 Aligned_cols=102 Identities=15% Similarity=0.145 Sum_probs=59.0
Q ss_pred CCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCc-EEEcCCCcCcccCCcccCCCCCC
Q 046589 354 CSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLE-KLDLSSNMLTGRIPKEIGNLRSI 432 (729)
Q Consensus 354 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~l~~l~~L 432 (729)
+++|+.|+|++|+++...+..|.++.+|+.+++.+| ++.+.+..| .++++|+ .+++.+ .++...+..|.+|++|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF---~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L 299 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVF---SNCGRLAGTLELPA-SVTAIEFGAFMGCDNL 299 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTT---TTCTTCCEEEEECT-TCCEECTTTTTTCTTE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHh---hCChhccEEEEEcc-cceEEchhhhhCCccC
Confidence 456666666666666555555666666666666665 444444444 3344455 666665 4554445566666666
Q ss_pred CEEEccCCccccccCcCccCCCCCCEEE
Q 046589 433 QILKLNSNFFNGSIPMRLGDSTSLNILE 460 (729)
Q Consensus 433 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 460 (729)
+.+++++|.++..-+.+|.++++|+.++
T Consensus 300 ~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 300 RYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred CEEEeCCCccCccchhhhcCCcchhhhc
Confidence 6666666666644455666666666554
No 380
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.57 E-value=1.9e-15 Score=157.42 Aligned_cols=82 Identities=20% Similarity=0.386 Sum_probs=67.2
Q ss_pred cccccceEecC---CccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 046589 625 DIKASNILLNE---DFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPT 701 (729)
Q Consensus 625 dlk~~nill~~---~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~ 701 (729)
|+||+||+++. ++.+|++|||+++.... ..++.++||||+||++|||+||+.|+
T Consensus 142 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-----------------------~~~~~~~DiwslG~il~el~tg~~pf 198 (299)
T 3m2w_A 142 DVKPENLLYTSKRPNAILKLTDFGFAKETTG-----------------------EKYDKSCDMWSLGVIMYILLCGYPPF 198 (299)
T ss_dssp CCSGGGEEESSSSTTCCEEECCCTTCEECTT-----------------------CGGGGHHHHHHHHHHHHHHHHSSCSC
T ss_pred CCCHHHEEEecCCCCCcEEEecccccccccc-----------------------ccCCchhhHHHHHHHHHHHHHCCCCC
Confidence 99999999997 78999999998865321 23467899999999999999999998
Q ss_pred CCC-------------------c--------chH--HHHhhcccCCCCCCCCccccC
Q 046589 702 GPK-------------------F--------EDK--DIVVGCVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 702 ~~~-------------------~--------~~~--~l~~~c~~~~p~~Rp~~~~v~ 729 (729)
... + .+. +++..|++.+|++|||++|++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l 255 (299)
T 3m2w_A 199 YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFM 255 (299)
T ss_dssp CC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHh
Confidence 520 0 001 799999999999999999874
No 381
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=5.3e-15 Score=141.18 Aligned_cols=133 Identities=15% Similarity=0.135 Sum_probs=96.6
Q ss_pred CCCCCCCcEEECCCCCCCCCCcccccCCC-CCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCC
Q 046589 125 LFDLSKLRVLNLSQNLLFGQPSPQVSNLK-RLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQL 203 (729)
Q Consensus 125 l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L 203 (729)
+.+.++|++|++++|+++.+ + .+..+. +|++|+|++|.+++. +.++.+++|++|+|++|++++..+..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~-~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-E-NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-C-CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCchh-H-HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 44567788888888888765 3 344444 888888888888754 577888888888888888875544555788888
Q ss_pred cEEEccCCCCCCCCcc--ccCCCCCCCeeeccCCcCCCCCChh---hhccCCCCCEEEccccccc
Q 046589 204 KSLDFSGNGFNGTVPI--RLGELTRLQDLDLSDNLLSGSLTVS---LFTNLQSLSYLDVSNNLLS 263 (729)
Q Consensus 204 ~~L~Ls~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~~~~---~~~~l~~L~~L~Ls~N~l~ 263 (729)
++|++++|.++ .+|. .+..+++|++|++++|.++ .++.. .+..+++|++||++.|...
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 88888888886 4554 6777788888888888776 44433 4677777888877777654
No 382
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.48 E-value=3.5e-16 Score=152.46 Aligned_cols=112 Identities=24% Similarity=0.275 Sum_probs=52.0
Q ss_pred cccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCC
Q 046589 148 QVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRL 227 (729)
Q Consensus 148 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 227 (729)
.+..+++|++|+|++|++++ +| .+..+++|++|++++|+++ .+|..+..+++|++|++++|++++ +| .+..+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCC
Confidence 34444444444444444442 33 4444444444444444444 334444444445555555554442 22 34444555
Q ss_pred CeeeccCCcCCCCCC-hhhhccCCCCCEEEccccccccc
Q 046589 228 QDLDLSDNLLSGSLT-VSLFTNLQSLSYLDVSNNLLSGN 265 (729)
Q Consensus 228 ~~L~L~~N~l~~~~~-~~~~~~l~~L~~L~Ls~N~l~~~ 265 (729)
++|++++|.++ .++ ...+..+++|++|++++|.+.+.
T Consensus 118 ~~L~l~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 118 RVLYMSNNKIT-NWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp SEEEESEEECC-CHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred CEEECCCCcCC-chhHHHHHhcCCCCCEEEecCCccccc
Confidence 55555555544 222 13445555555555555555443
No 383
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.47 E-value=7.3e-14 Score=133.20 Aligned_cols=135 Identities=20% Similarity=0.208 Sum_probs=114.9
Q ss_pred ccccCCCCCCEEeccCCcCcccCCccccCCC-CCcEEEeeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCC
Q 046589 147 PQVSNLKRLKMLSLGENQLSGSLPSQLGVLT-WLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELT 225 (729)
Q Consensus 147 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 225 (729)
+.+.++.+|++|++++|+++ .+|. +..+. +|++|++++|.+++. ..|.++++|++|++++|.+++..+..+..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 35677889999999999998 4555 55555 999999999999965 6899999999999999999965555569999
Q ss_pred CCCeeeccCCcCCCCCCh-hhhccCCCCCEEEcccccccccCCcc----ccCCCcCCeecccccccc
Q 046589 226 RLQDLDLSDNLLSGSLTV-SLFTNLQSLSYLDVSNNLLSGNIPPE----ISHLKKLSDHYLGINQFT 287 (729)
Q Consensus 226 ~L~~L~L~~N~l~~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~----l~~l~~L~~l~l~~n~l~ 287 (729)
+|++|++++|.++ .++. ..+..+++|++|++++|.++ ..|.. +..+++|+.++++.|...
T Consensus 89 ~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 9999999999996 5663 47889999999999999998 45654 889999999999988764
No 384
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.46 E-value=3.9e-14 Score=146.35 Aligned_cols=108 Identities=16% Similarity=0.112 Sum_probs=89.3
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec-----------------------------------------------
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK----------------------------------------------- 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~----------------------------------------------- 624 (729)
+.|.....+|+|+||.||+|... +|+.||||.
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 35666778999999999999985 688999996
Q ss_pred -------------------------------------------cccccceEecCCccEEEeecCCccccCCCCCcceecc
Q 046589 625 -------------------------------------------DIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDV 661 (729)
Q Consensus 625 -------------------------------------------dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~ 661 (729)
|+||+||+++.++.+|+++++
T Consensus 111 e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~---------------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA---------------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC----------------
T ss_pred EecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc----------------
Confidence 999999999999999987332
Q ss_pred cccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----c----c-----------------h--HHHHhh
Q 046589 662 ASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGPK-----F----E-----------------D--KDIVVG 713 (729)
Q Consensus 662 ~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~-----~----~-----------------~--~~l~~~ 713 (729)
|++ .++.++|||||||++|||+||+.|+... + . + .+++.+
T Consensus 175 -----~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 242 (286)
T 3uqc_A 175 -----TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAAR 242 (286)
T ss_dssp -----CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHH
T ss_pred -----ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHH
Confidence 333 2578999999999999999999998631 0 0 0 179999
Q ss_pred cccCCCCCCCCccccC
Q 046589 714 CVSDNPIAKPGMLRVQ 729 (729)
Q Consensus 714 c~~~~p~~Rp~~~~v~ 729 (729)
|++.+|++| |++|++
T Consensus 243 ~l~~dP~~R-s~~el~ 257 (286)
T 3uqc_A 243 SVQGDGGIR-SASTLL 257 (286)
T ss_dssp HHCTTSSCC-CHHHHH
T ss_pred HcccCCccC-CHHHHH
Confidence 999999999 998863
No 385
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.46 E-value=3e-16 Score=152.95 Aligned_cols=153 Identities=26% Similarity=0.306 Sum_probs=128.8
Q ss_pred cCCcEEEEcCCCCCcCcCCc------cCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCC
Q 046589 104 LLRVVYQVLRTQSLKGPVSP------LLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLT 177 (729)
Q Consensus 104 ~~~~~~l~l~~~~l~~~~~~------~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~ 177 (729)
..++..++++.+.+.|.+|. .+..+++|++|++++|.+++. | .+.++++|++|++++|.++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l-~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKI-S-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCC-C-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCccc-c-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 45677788888888888776 889999999999999999985 4 8899999999999999998 7888888889
Q ss_pred CCcEEEeeccCCCccCCccccCCCCCcEEEccCCCCCCCCc-cccCCCCCCCeeeccCCcCCCCCCh---------hhhc
Q 046589 178 WLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVP-IRLGELTRLQDLDLSDNLLSGSLTV---------SLFT 247 (729)
Q Consensus 178 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~---------~~~~ 247 (729)
+|++|++++|++++ +| .+.++++|++|++++|+++...+ ..+..+++|++|++++|.+++.++. ..+.
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 171 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVK 171 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHH
Confidence 99999999999985 45 68899999999999999985333 4789999999999999998754331 2377
Q ss_pred cCCCCCEEEccccccc
Q 046589 248 NLQSLSYLDVSNNLLS 263 (729)
Q Consensus 248 ~l~~L~~L~Ls~N~l~ 263 (729)
.+++|++|| +|.++
T Consensus 172 ~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 172 RLPNLKKLD--GMPVD 185 (198)
T ss_dssp HCSSCSEEC--CGGGT
T ss_pred hCCCcEEEC--CcccC
Confidence 888999887 56554
No 386
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.45 E-value=4.3e-12 Score=137.16 Aligned_cols=264 Identities=11% Similarity=0.105 Sum_probs=144.7
Q ss_pred CCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEc
Q 046589 129 SKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDF 208 (729)
Q Consensus 129 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 208 (729)
..++.+.+.. .++.+...+|.++ +|+.+++..+ ++......|.+ .+|+.+.+.. .++..-+.+|.++++|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 5566666653 3555666677664 6788877666 55455566666 4677777764 566566667777777777777
Q ss_pred cCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeeccccccccc
Q 046589 209 SGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTG 288 (729)
Q Consensus 209 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~ 288 (729)
++|.++......|. ..+|+.+.+..+ ++ .++...|..+++|+.+++..| ++......|.
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~----------------- 246 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFR----------------- 246 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CC-EECTTTTTTCTTCCCEECCTT-CCEECTTTTT-----------------
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hh-eehhhHhhCCCCCCEEecCCC-ccCccccccc-----------------
Confidence 77777643333444 466777776643 43 455566666666666665442 1111111111
Q ss_pred cccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCC
Q 046589 289 SIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLS 368 (729)
Q Consensus 289 ~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 368 (729)
. .+|+.+.+. +.+...-...|..|++|+.+++.+|.+.
T Consensus 247 ----------------------------------------~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 247 ----------------------------------------E-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp ----------------------------------------T-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred ----------------------------------------c-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 1 234444442 2233344456666777777777666553
Q ss_pred -----CCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccc
Q 046589 369 -----GSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFN 443 (729)
Q Consensus 369 -----~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 443 (729)
...+..|.++++ |+.++|. +.++..-...|.+|++|+.+.+..| ++
T Consensus 285 ~~~~~~I~~~aF~~c~~---------------------------L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~ 335 (401)
T 4fdw_A 285 DDPEAMIHPYCLEGCPK---------------------------LARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VT 335 (401)
T ss_dssp CCTTCEECTTTTTTCTT---------------------------CCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CC
T ss_pred CCcccEECHHHhhCCcc---------------------------CCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-cc
Confidence 122233444444 4444444 2243333445555555555555433 43
Q ss_pred cccCcCccCCCCCCEEEcccccCCccCchhhhcCC-CCCEEeCCCCcC
Q 046589 444 GSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLA-QLQFLDLSYNNL 490 (729)
Q Consensus 444 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~LdLs~N~l 490 (729)
..-+.+|.++ +|+.+++++|.+....+..|.+++ +++.|.+..+.+
T Consensus 336 ~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 336 QINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp EECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred EEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 3334455555 566666666655544444555552 456666665543
No 387
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=6.3e-13 Score=125.84 Aligned_cols=105 Identities=22% Similarity=0.223 Sum_probs=56.9
Q ss_pred CcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccC
Q 046589 131 LRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSG 210 (729)
Q Consensus 131 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 210 (729)
.+++++++|.++.++. .+ .++|++|+|++|+|++..|..|..+++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~ip~-~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLASVPT-GI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSSCCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCccCc-cC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 3455565555555332 22 24555666666666555555555555566666665555544444455555555555555
Q ss_pred CCCCCCCccccCCCCCCCeeeccCCcCC
Q 046589 211 NGFNGTVPIRLGELTRLQDLDLSDNLLS 238 (729)
Q Consensus 211 N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 238 (729)
|++++..+..|..+++|++|+|++|.++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 5555444444555555555555555554
No 388
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=6.6e-13 Score=125.68 Aligned_cols=108 Identities=28% Similarity=0.323 Sum_probs=96.0
Q ss_pred CCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeecc
Q 046589 154 RLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLS 233 (729)
Q Consensus 154 ~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 233 (729)
..+.+++++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 4689999999998 6787664 889999999999998889999999999999999999997777778999999999999
Q ss_pred CCcCCCCCChhhhccCCCCCEEEccccccccc
Q 046589 234 DNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGN 265 (729)
Q Consensus 234 ~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 265 (729)
+|+++ .++...|..+++|++|+|++|.+...
T Consensus 87 ~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 87 DNQLK-SIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SSCCC-CCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CCccC-EeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 99998 56667789999999999999998754
No 389
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=1.3e-12 Score=124.18 Aligned_cols=104 Identities=22% Similarity=0.257 Sum_probs=50.3
Q ss_pred cEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCC
Q 046589 132 RVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGN 211 (729)
Q Consensus 132 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 211 (729)
+.+++++|+++.++. .+. ++|++|+|++|+|++..|..|+.+++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~~iP~-~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLASVPA-GIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSSCCS-CCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCccCC-CcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 445555555544322 221 44555555555555444555555555555555555555433333445555555555555
Q ss_pred CCCCCCccccCCCCCCCeeeccCCcCC
Q 046589 212 GFNGTVPIRLGELTRLQDLDLSDNLLS 238 (729)
Q Consensus 212 ~l~~~~p~~l~~l~~L~~L~L~~N~l~ 238 (729)
++++..+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 555333333444555555555555443
No 390
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=1.1e-12 Score=124.53 Aligned_cols=106 Identities=28% Similarity=0.351 Sum_probs=94.7
Q ss_pred CCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccC
Q 046589 155 LKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSD 234 (729)
Q Consensus 155 L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 234 (729)
-+.+++++|+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 478999999997 7888775 8999999999999988899999999999999999999976666789999999999999
Q ss_pred CcCCCCCChhhhccCCCCCEEEcccccccc
Q 046589 235 NLLSGSLTVSLFTNLQSLSYLDVSNNLLSG 264 (729)
Q Consensus 235 N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 264 (729)
|+++ .++...|..+++|++|+|++|.+..
T Consensus 91 N~l~-~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLK-SIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCC-CCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred Cccc-eeCHHHhccccCCCEEEeCCCCccc
Confidence 9998 5666778999999999999999874
No 391
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.38 E-value=1.2e-11 Score=133.56 Aligned_cols=107 Identities=7% Similarity=0.015 Sum_probs=76.4
Q ss_pred CCCcEEEcCCCcCc-----ccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCchhhhcCCCC
Q 046589 406 SQLEKLDLSSNMLT-----GRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQL 480 (729)
Q Consensus 406 ~~L~~L~Ls~N~l~-----~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 480 (729)
++|+.+++.+|.+. ...+..|.+|++|+.+++.+ .++..-..+|.++++|+.+.|..| ++..-+.+|.++ +|
T Consensus 271 ~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L 347 (401)
T 4fdw_A 271 PELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GI 347 (401)
T ss_dssp TTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CC
T ss_pred CCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CC
Confidence 34445555444433 34567899999999999994 577566788999999999999665 776677889999 99
Q ss_pred CEEeCCCCcCcccccccccccccccCCCCcccC-CCCCeEecCCCcCc
Q 046589 481 QFLDLSYNNLSRPILSKHSSYFHEVNIPDLSYS-HNYRKFDLSYNMLS 527 (729)
Q Consensus 481 ~~LdLs~N~l~~~~~~~~~~~~~~~~~~~~~~~-~~l~~ldls~N~l~ 527 (729)
+.+++++|.+.. ++.. .+..+ .++..+++..+.+.
T Consensus 348 ~~l~l~~n~~~~-l~~~-----------~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 348 KEVKVEGTTPPQ-VFEK-----------VWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CEEEECCSSCCB-CCCS-----------SCCCSCTTCCEEEECGGGHH
T ss_pred CEEEEcCCCCcc-cccc-----------cccCCCCCccEEEeCHHHHH
Confidence 999999997653 1111 11223 35778888877654
No 392
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.31 E-value=1.4e-10 Score=125.57 Aligned_cols=310 Identities=13% Similarity=0.074 Sum_probs=162.3
Q ss_pred cCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCC
Q 046589 124 LLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQL 203 (729)
Q Consensus 124 ~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L 203 (729)
.+.++++|+.+.+.. .++.+...+|.++.+|+.+++..+ ++......|.++.+|+.+.+..+ +...-..+|.++..+
T Consensus 66 AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~ 142 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFK 142 (394)
T ss_dssp TTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCS
T ss_pred HhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccccc
Confidence 455677777777764 366666677777778888877654 54445566777777777666543 443445556555443
Q ss_pred cEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeecccc
Q 046589 204 KSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGI 283 (729)
Q Consensus 204 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~ 283 (729)
+...... ........|.++.+|+.+.+.++. . .++...|....+|+.+++..+ ++......+.....|+.+.+..
T Consensus 143 ~~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~-~-~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~ 217 (394)
T 4fs7_A 143 EITIPEG--VTVIGDEAFATCESLEYVSLPDSM-E-TLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPN 217 (394)
T ss_dssp EEECCTT--CCEECTTTTTTCTTCCEEECCTTC-C-EECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCT
T ss_pred ccccCcc--ccccchhhhcccCCCcEEecCCcc-c-eeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCC
Confidence 3333222 222334456667777777765542 2 355566666677776666554 3323334455555555443322
Q ss_pred ccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEec
Q 046589 284 NQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLS 363 (729)
Q Consensus 284 n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 363 (729)
+... +.........|+.+.+... +...-...+..+..++.+.+.
T Consensus 218 ~~~~-----------------------------------i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~ 261 (394)
T 4fs7_A 218 SLYY-----------------------------------LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQ 261 (394)
T ss_dssp TCCE-----------------------------------ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEEC
T ss_pred CceE-----------------------------------eehhhcccCCCceEEECCC-ceecccccccccccceeEEcC
Confidence 2110 0011112234444444332 122223345556666666665
Q ss_pred CCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccc
Q 046589 364 NNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFN 443 (729)
Q Consensus 364 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 443 (729)
.+... .....|..+..++.+....+.+. ...| ....+|+.+.+..+ ++..-...|.++.+|+.+++..+ ++
T Consensus 262 ~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F---~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~ 332 (394)
T 4fs7_A 262 NNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTF---YGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE 332 (394)
T ss_dssp CTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTT---TTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC
T ss_pred CCcce-eeccccccccccceeccCceeec---cccc---cccccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc
Confidence 55332 33444555555655555443221 1222 23344555665543 44344455666666666666533 44
Q ss_pred cccCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCC
Q 046589 444 GSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSY 487 (729)
Q Consensus 444 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~ 487 (729)
..-..+|.++.+|+.+++..| ++..-..+|.++.+|+.+++..
T Consensus 333 ~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~ 375 (394)
T 4fs7_A 333 EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPK 375 (394)
T ss_dssp EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEG
T ss_pred EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECC
Confidence 333455666666666666554 4434445666666666666543
No 393
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.27 E-value=7.1e-12 Score=133.17 Aligned_cols=102 Identities=22% Similarity=0.192 Sum_probs=52.3
Q ss_pred EECCCC-CCCCCCcccccCCCCCCEEeccC-CcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCC
Q 046589 134 LNLSQN-LLFGQPSPQVSNLKRLKMLSLGE-NQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGN 211 (729)
Q Consensus 134 L~Ls~N-~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 211 (729)
++.+++ ++++++. +..+++|++|+|++ |+|++..|..|+.+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 13 v~~~~~n~l~~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDSLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTTTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 344444 4444322 55555555555553 5555444455555555555555555555555555555555555555555
Q ss_pred CCCCCCccccCCCCCCCeeeccCCcCC
Q 046589 212 GFNGTVPIRLGELTRLQDLDLSDNLLS 238 (729)
Q Consensus 212 ~l~~~~p~~l~~l~~L~~L~L~~N~l~ 238 (729)
+|++..+..+..+. |+.|+|.+|.+.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 55533333333333 555555555554
No 394
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.19 E-value=5.3e-11 Score=126.41 Aligned_cols=103 Identities=18% Similarity=0.183 Sum_probs=92.6
Q ss_pred EEcCCC-CCcCcCCccCCCCCCCcEEECCC-CCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeecc
Q 046589 110 QVLRTQ-SLKGPVSPLLFDLSKLRVLNLSQ-NLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSN 187 (729)
Q Consensus 110 l~l~~~-~l~~~~~~~l~~L~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N 187 (729)
++++++ .++. +|. +..+++|++|+|++ |.++++++..|+++++|++|+|++|+|++..|..|+++++|++|+|++|
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 477777 7774 888 99999999999996 9999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCccccCCCCCcEEEccCCCCCC
Q 046589 188 SFTGEMPSELGDMKQLKSLDFSGNGFNG 215 (729)
Q Consensus 188 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 215 (729)
+|++..+..|..+. |++|+|++|.+..
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 99976666666666 9999999999874
No 395
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.17 E-value=2.6e-13 Score=145.29 Aligned_cols=169 Identities=20% Similarity=0.143 Sum_probs=124.6
Q ss_pred HhcCCcEEEEcCCCCCcCcCCc----cCC-CCCCCcEEECCCCCCCCCCcccc-cCCCCCCEEeccCCcCcccCCccc--
Q 046589 102 ELLLRVVYQVLRTQSLKGPVSP----LLF-DLSKLRVLNLSQNLLFGQPSPQV-SNLKRLKMLSLGENQLSGSLPSQL-- 173 (729)
Q Consensus 102 ~~~~~~~~l~l~~~~l~~~~~~----~l~-~L~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~l-- 173 (729)
+....++.+++++|.++..-.. .+. ..++|++|+|++|.++......+ ..+++|+.|+|++|.++......+
T Consensus 69 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~ 148 (372)
T 3un9_A 69 EVLSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRD 148 (372)
T ss_dssp HHHTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHH
T ss_pred HHHhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHH
Confidence 3467789999999998754222 233 23799999999999875433333 345689999999999976544444
Q ss_pred ---cCCCCCcEEEeeccCCCc----cCCccccCCCCCcEEEccCCCCCCC----CccccCCCCCCCeeeccCCcCCCCCC
Q 046589 174 ---GVLTWLETLSLCSNSFTG----EMPSELGDMKQLKSLDFSGNGFNGT----VPIRLGELTRLQDLDLSDNLLSGSLT 242 (729)
Q Consensus 174 ---~~L~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~~ 242 (729)
...++|++|+|++|.++. .++..+..+++|++|+|++|.++.. ++..+...++|++|+|++|.++. ..
T Consensus 149 ~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~-~g 227 (372)
T 3un9_A 149 LLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD-TA 227 (372)
T ss_dssp HHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH-HH
T ss_pred HHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH-HH
Confidence 346789999999999874 3455567889999999999998743 35567778899999999999863 22
Q ss_pred h----hhhccCCCCCEEEcccccccccCCcccc
Q 046589 243 V----SLFTNLQSLSYLDVSNNLLSGNIPPEIS 271 (729)
Q Consensus 243 ~----~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 271 (729)
. ..+...++|++|||++|.++......+.
T Consensus 228 ~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 228 ALALARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp HHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 1 2345678999999999998765444443
No 396
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.17 E-value=1.7e-09 Score=116.97 Aligned_cols=323 Identities=15% Similarity=0.098 Sum_probs=208.8
Q ss_pred CCcEEEEcCCCCCcCcCCccCCCCCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEe
Q 046589 105 LRVVYQVLRTQSLKGPVSPLLFDLSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSL 184 (729)
Q Consensus 105 ~~~~~l~l~~~~l~~~~~~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L 184 (729)
.+++.+.+. ++++.--...+.++++|+.+++..+ ++.+...+|..+..|+.+.+..+ +.......|.+...++....
T Consensus 71 ~~L~~i~lp-~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~~ 147 (394)
T 4fs7_A 71 RKVTEIKIP-STVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITIP 147 (394)
T ss_dssp TTEEEEECC-TTCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEECC
T ss_pred CCceEEEeC-CCccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccccccccC
Confidence 456677775 3344222346778999999999865 77677788999999999888755 44455666766654443332
Q ss_pred eccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccc
Q 046589 185 CSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSG 264 (729)
Q Consensus 185 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 264 (729)
+.....-..+|.++++|+.+.+..+. .......|.++.+|+.+.+..+ ++ .+....|.....|+.+.+..+...
T Consensus 148 --~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~-~I~~~~F~~~~~L~~i~~~~~~~~- 221 (394)
T 4fs7_A 148 --EGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LK-IIRDYCFAECILLENMEFPNSLYY- 221 (394)
T ss_dssp --TTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CC-EECTTTTTTCTTCCBCCCCTTCCE-
T ss_pred --ccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ce-EeCchhhccccccceeecCCCceE-
Confidence 23333456789999999999998664 3355667889999999999876 44 566788889999998887665432
Q ss_pred cCCccccCCCcCCeeccccccccccccccccCCCCcccccccceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcce
Q 046589 265 NIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAELQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFI 344 (729)
Q Consensus 265 ~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 344 (729)
+.........|+.+.+... ++ ......+.....++.+.+..+..
T Consensus 222 -i~~~~~~~~~l~~i~ip~~-~~---------------------------------~i~~~~f~~~~~l~~~~~~~~~~- 265 (394)
T 4fs7_A 222 -LGDFALSKTGVKNIIIPDS-FT---------------------------------ELGKSVFYGCTDLESISIQNNKL- 265 (394)
T ss_dssp -ECTTTTTTCCCCEEEECTT-CC---------------------------------EECSSTTTTCSSCCEEEECCTTC-
T ss_pred -eehhhcccCCCceEEECCC-ce---------------------------------ecccccccccccceeEEcCCCcc-
Confidence 1122222234444332111 00 00112334455666666665533
Q ss_pred ecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCc
Q 046589 345 GRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPK 424 (729)
Q Consensus 345 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 424 (729)
......|..+..++.+....+.+ ....|..+.+|+.+.+..+ ++.+....| .++.+|+.++|..+ ++..-..
T Consensus 266 ~i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF---~~c~~L~~i~lp~~-v~~I~~~ 337 (394)
T 4fs7_A 266 RIGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAF---ESCTSLVSIDLPYL-VEEIGKR 337 (394)
T ss_dssp EECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTT---TTCTTCCEECCCTT-CCEECTT
T ss_pred eeeccccccccccceeccCceee---ccccccccccccccccccc-cceechhhh---cCCCCCCEEEeCCc-ccEEhHH
Confidence 24455677777788777766543 2345677788888887654 444444445 34556777888644 6655567
Q ss_pred ccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEE
Q 046589 425 EIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFL 483 (729)
Q Consensus 425 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 483 (729)
+|.++.+|+.+.+..+ ++..-..+|.++.+|+.+++..+ ++ .+..+|.++++|+.+
T Consensus 338 aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 338 SFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred hccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 8888999999998776 66455678888899999988765 32 344567666666543
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.16 E-value=1.1e-12 Score=140.30 Aligned_cols=162 Identities=19% Similarity=0.194 Sum_probs=86.2
Q ss_pred CCCCEEEccCCcceecCCCCC----c-CCCCCcEEEecCCCCCCCCccccc-CCCCCcEEEcCCCCCCCCcccccccc--
Q 046589 331 NQMESVWLNNNQFIGRIPLEV----G-NCSMLKYIRLSNNKLSGSIPRELN-DSESLVEINLDGNMLSGTIEDVFGRC-- 402 (729)
Q Consensus 331 ~~L~~L~L~~n~l~~~~p~~l----~-~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~-- 402 (729)
+.|+.|++++|.++......+ . ..++|++|+|++|.++......+. .+++|+.|+|++|.++......+...
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 456677777776653222111 1 225677777777776543222222 23466677777776654332222211
Q ss_pred CCCCCCcEEEcCCCcCccc----CCcccCCCCCCCEEEccCCccccc----cCcCccCCCCCCEEEcccccCCcc----C
Q 046589 403 TNLSQLEKLDLSSNMLTGR----IPKEIGNLRSIQILKLNSNFFNGS----IPMRLGDSTSLNILELGNNNLNGS----I 470 (729)
Q Consensus 403 ~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~ 470 (729)
...++|++|+|++|.++.. ++..+..+++|++|+|++|.+++. ++..+...++|+.|+|++|.++.. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 2234566677777766532 333345566666666666666532 233444555666666666666542 2
Q ss_pred chhhhcCCCCCEEeCCCCcCcc
Q 046589 471 PEKIADLAQLQFLDLSYNNLSR 492 (729)
Q Consensus 471 p~~l~~l~~L~~LdLs~N~l~~ 492 (729)
+..+...++|++|||++|.|+.
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHhCCCCCEEeccCCCCCH
Confidence 2333445666666666666653
No 398
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.09 E-value=1.5e-11 Score=130.13 Aligned_cols=75 Identities=19% Similarity=0.164 Sum_probs=62.5
Q ss_pred eeeccccccceEecCCc--------------------cEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCc
Q 046589 621 AVKKDIKASNILLNEDF--------------------DAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANE 680 (729)
Q Consensus 621 avk~dlk~~nill~~~~--------------------~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~ 680 (729)
+||||+||+||+++.++ .+||+|||+|+..... ...+|..|+|||.+.+.. +.
T Consensus 183 ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aPE~~~g~~-~~ 255 (336)
T 2vuw_A 183 FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDEDLFTGDG-DY 255 (336)
T ss_dssp CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCSGGGCCCS-SH
T ss_pred EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccChhhhcCCC-cc
Confidence 79999999999999876 9999999999876431 236789999999887655 88
Q ss_pred hhhHHHHHHH-HHHHHhCCCCCC
Q 046589 681 RDNIYRFGVV-LLELVIRKQPTG 702 (729)
Q Consensus 681 ~~Dv~s~G~v-l~el~tg~~p~~ 702 (729)
++||||+|++ .+++++|..|+.
T Consensus 256 ~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 256 QFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp HHHHHHHHHHHHTTCTTSCCTHH
T ss_pred ceehhhhhCCCCcccccccCCCc
Confidence 9999998877 667888888863
No 399
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.07 E-value=1.2e-08 Score=110.10 Aligned_cols=143 Identities=13% Similarity=0.136 Sum_probs=87.9
Q ss_pred CCcEEECCCCCCCCCCcccccCCCCCCEEeccCCc---CcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEE
Q 046589 130 KLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQ---LSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSL 206 (729)
Q Consensus 130 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~---l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 206 (729)
.|+.+.+..+ ++.+...+|.++.+|+.+.++.|. ++......|..+.+|+.+.+..+ ++.....+|..+.+|+.+
T Consensus 65 ~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i 142 (394)
T 4gt6_A 65 VLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTV 142 (394)
T ss_dssp CCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEE
T ss_pred cCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccc
Confidence 4777777643 666667778888888888887664 55445566777777777766543 444555677777888888
Q ss_pred EccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCee
Q 046589 207 DFSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDH 279 (729)
Q Consensus 207 ~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l 279 (729)
.+..+ +.......|..+.+|+.+.+..+ ++ .+....|.. .+|+.+.+..+... .....+.....+...
T Consensus 143 ~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~-~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~ 210 (394)
T 4gt6_A 143 TIPEG-VTSVADGMFSYCYSLHTVTLPDS-VT-AIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALSTI 210 (394)
T ss_dssp ECCTT-CCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCEE
T ss_pred cccce-eeeecccceecccccccccccce-ee-Eeccccccc-cceeEEEECCcccc-cccchhhhcccccee
Confidence 87644 33344556777777777777654 33 455455543 56777766543221 233344444444443
No 400
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.95 E-value=2e-11 Score=137.94 Aligned_cols=76 Identities=13% Similarity=0.066 Sum_probs=47.0
Q ss_pred eeeccccccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCC
Q 046589 621 AVKKDIKASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRK 698 (729)
Q Consensus 621 avk~dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~ 698 (729)
+|||||||+|||++.++.+||+|||+|+...... ....+..||++|||||...+ .+..++|+||.|++++++.++.
T Consensus 360 IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~-~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 360 FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC-SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp CEESCCCGGGEEECTTSCEEECCCTTEESCC----CCSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred ceeccCchHhEEECCCCCEEEeecccCeeCCCCC-ccccCceechhhccHHHhCC-CCCCcccccccccchhhhcccc
Confidence 8999999999999999999999999998765422 22345678999999998754 4567899999999887765543
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.91 E-value=8e-08 Score=103.66 Aligned_cols=312 Identities=9% Similarity=0.112 Sum_probs=171.3
Q ss_pred CCCcccccCCC-CCCEEeccCCcCcccCCccccCCCCCcEEEeeccC---CCccCCccccCCCCCcEEEccCCCCCCCCc
Q 046589 143 GQPSPQVSNLK-RLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNS---FTGEMPSELGDMKQLKSLDFSGNGFNGTVP 218 (729)
Q Consensus 143 ~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~---l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 218 (729)
.+...+|.+++ .|+.+.+..+ ++.+...+|.++.+|+.+.+..|. ++..-..+|.++.+|+.+.+..+ ++....
T Consensus 53 ~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~ 130 (394)
T 4gt6_A 53 KIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDS 130 (394)
T ss_dssp EECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECT
T ss_pred EcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehh
Confidence 34456777775 5999999755 666778889999999999998774 66556678888999998888665 444556
Q ss_pred cccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeeccccccccccccccccCCC
Q 046589 219 IRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCK 298 (729)
Q Consensus 219 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~ 298 (729)
..|..+.+|+.+.+..+ +. .+....|....+|+.+.+..+ ++......|.. ..|+.+.+..+. +..-...+..|.
T Consensus 131 ~aF~~c~~L~~i~lp~~-~~-~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~-~~i~~~af~~c~ 205 (394)
T 4gt6_A 131 EAFHHCEELDTVTIPEG-VT-SVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKV-TRIGTNAFSECF 205 (394)
T ss_dssp TTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTC-CEECTTTTTTCT
T ss_pred hhhhhhcccccccccce-ee-eecccceecccccccccccce-eeEeccccccc-cceeEEEECCcc-cccccchhhhcc
Confidence 67888899999998754 33 566678888899999888654 33233333432 456555543321 111122333343
Q ss_pred CcccccccceeEEEEccCCCCCCCcchhcC-CCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccC
Q 046589 299 NFKSVLAELQIFTFSAGMNQLSGPLPSWLG-KWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELND 377 (729)
Q Consensus 299 ~l~~~l~~l~l~~l~l~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 377 (729)
.+... ....+... .....+. ......... ..+.....+..+.+.. .++......|..
T Consensus 206 ~l~~~---------~~~~~~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ip~-~v~~i~~~aF~~ 263 (394)
T 4gt6_A 206 ALSTI---------TSDSESYP-AIDNVLYEKSANGDYAL-----------IRYPSQREDPAFKIPN-GVARIETHAFDS 263 (394)
T ss_dssp TCCEE---------EECCSSSC-BSSSCEEEECTTSCEEE-----------EECCTTCCCSEEECCT-TEEEECTTTTTT
T ss_pred cccee---------cccccccc-cccceeecccccccccc-----------cccccccccceEEcCC-cceEcccceeee
Confidence 32211 00000000 0000000 000000000 0000111222222221 122222334555
Q ss_pred CCCCcEEEcCCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCC
Q 046589 378 SESLVEINLDGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLN 457 (729)
Q Consensus 378 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 457 (729)
+..|+.+.+..+... .....| .+.+.|+.+.+. +.++......|.++.+|+.+++..+ ++..-..+|.++.+|+
T Consensus 264 c~~L~~i~lp~~~~~-I~~~aF---~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~ 337 (394)
T 4gt6_A 264 CAYLASVKMPDSVVS-IGTGAF---MNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLE 337 (394)
T ss_dssp CSSCCEEECCTTCCE-ECTTTT---TTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred cccccEEecccccce-ecCccc---ccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCC
Confidence 556666665443221 222222 334456666664 3444444556777777777777654 4434456677777777
Q ss_pred EEEcccccCCccCchhhhcCCCCCEEeCCCCcC
Q 046589 458 ILELGNNNLNGSIPEKIADLAQLQFLDLSYNNL 490 (729)
Q Consensus 458 ~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l 490 (729)
.+.+..+ ++..-..+|.++++|+.+++.+|..
T Consensus 338 ~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 338 RIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp EEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred EEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 7777544 5544556777777787777777643
No 402
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.63 E-value=8.2e-09 Score=109.43 Aligned_cols=181 Identities=13% Similarity=0.116 Sum_probs=115.6
Q ss_pred CCcEEEEcCCCCCcC-cC-------CccCCCCCCCcEEECCCCCCC---------CCCcccccCCCCCCEEeccCCcCcc
Q 046589 105 LRVVYQVLRTQSLKG-PV-------SPLLFDLSKLRVLNLSQNLLF---------GQPSPQVSNLKRLKMLSLGENQLSG 167 (729)
Q Consensus 105 ~~~~~l~l~~~~l~~-~~-------~~~l~~L~~L~~L~Ls~N~l~---------~~~~~~~~~l~~L~~L~Ls~N~l~~ 167 (729)
.+++.|++....+.| .. ...+..+++|+.|.+..+... +.+...+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 457777777555543 21 223456789999998765432 123344567889999999988411
Q ss_pred cCCccccCCCCCcEEEeeccCCCccCCcccc--CCCCCcEEEccC--CCCCCC-----Ccccc--CCCCCCCeeeccCCc
Q 046589 168 SLPSQLGVLTWLETLSLCSNSFTGEMPSELG--DMKQLKSLDFSG--NGFNGT-----VPIRL--GELTRLQDLDLSDNL 236 (729)
Q Consensus 168 ~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~--~l~~L~~L~Ls~--N~l~~~-----~p~~l--~~l~~L~~L~L~~N~ 236 (729)
.++. +. +++|++|+|..|.+.......+. .+++|++|+|+. |...+. +...+ ..+++|++|+|++|.
T Consensus 186 ~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 186 SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 2333 43 78999999998887643333343 789999999864 221111 11122 357899999999887
Q ss_pred CCCCCChhhh--ccCCCCCEEEccccccccc----CCccccCCCcCCeeccccccccc
Q 046589 237 LSGSLTVSLF--TNLQSLSYLDVSNNLLSGN----IPPEISHLKKLSDHYLGINQFTG 288 (729)
Q Consensus 237 l~~~~~~~~~--~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~l~l~~n~l~~ 288 (729)
+........+ ..+++|++|+|+.|.+.+. ++..+..+++|+.++++.|.++.
T Consensus 264 i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp THHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 7532221122 2577899999999988764 23344567888888888887764
No 403
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.61 E-value=2.1e-08 Score=106.20 Aligned_cols=61 Identities=15% Similarity=0.157 Sum_probs=37.3
Q ss_pred chhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCccccc--CCCCCcEEEcC
Q 046589 324 PSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELN--DSESLVEINLD 387 (729)
Q Consensus 324 p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~ 387 (729)
+..+..+++|+.|++++|.-. .++. + .+++|++|+|..+.+.......++ .+++|+.|+|+
T Consensus 165 ~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 165 SPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp HHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred HHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 345556678888888777311 2232 3 367888888887776543333333 56777777764
No 404
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.57 E-value=4.1e-06 Score=89.59 Aligned_cols=123 Identities=6% Similarity=0.087 Sum_probs=63.9
Q ss_pred CCCCcEEECCCCCCCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEE
Q 046589 128 LSKLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLD 207 (729)
Q Consensus 128 L~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 207 (729)
-.+|+.+.+.. .++.+...+|.++.+|+.++|..+ ++......|.+. +|+.+.+..+ ++..-..+|.. .+|+.+.
T Consensus 45 ~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~ 119 (379)
T 4h09_A 45 RDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFE 119 (379)
T ss_dssp GGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEE
T ss_pred ccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCccccc
Confidence 34566666643 355555667777777777777544 554445556554 5666666433 44333344444 3677777
Q ss_pred ccCCCCCCCCccccCCCCCCCeeeccCCcCCCCCChhhhccCCCCCEEEccc
Q 046589 208 FSGNGFNGTVPIRLGELTRLQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSN 259 (729)
Q Consensus 208 Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~ 259 (729)
+..+- .......|.+ .+|+.+.+..+ ++ .+....|....+++...+..
T Consensus 120 lp~~~-~~i~~~~F~~-~~l~~~~~~~~-v~-~i~~~~f~~~~~l~~~~~~~ 167 (379)
T 4h09_A 120 FPGAT-TEIGNYIFYN-SSVKRIVIPKS-VT-TIKDGIGYKAENLEKIEVSS 167 (379)
T ss_dssp CCTTC-CEECTTTTTT-CCCCEEEECTT-CC-EECSCTTTTCTTCCEEEECT
T ss_pred CCCcc-cccccccccc-ceeeeeeccce-ee-ccccchhccccccccccccc
Confidence 76542 2122223332 34555544332 22 23334455556666655544
No 405
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.56 E-value=5.7e-06 Score=88.47 Aligned_cols=303 Identities=11% Similarity=0.068 Sum_probs=152.5
Q ss_pred ccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEeeccCCCccCCccccCCCCCcEEEccCCCCCCCCccccCCCCC
Q 046589 147 PQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELTR 226 (729)
Q Consensus 147 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 226 (729)
+++....+|+.+.+.. .++.+...+|.++.+|+.++|..+ ++..-..+|.++ +|+.+.+..+ ++......|.. ++
T Consensus 40 ~~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~ 114 (379)
T 4h09_A 40 PWYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TD 114 (379)
T ss_dssp TTGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CC
T ss_pred cccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CC
Confidence 3455566788888764 355456677888888999888644 665666677776 6777776543 44233334443 47
Q ss_pred CCeeeccCCcCCCCCChhhhccCCCCCEEEcccccccccCCccccCCCcCCeeccccccccccccccccCCCCccccccc
Q 046589 227 LQDLDLSDNLLSGSLTVSLFTNLQSLSYLDVSNNLLSGNIPPEISHLKKLSDHYLGINQFTGSIQSELGNCKNFKSVLAE 306 (729)
Q Consensus 227 L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~l~~ 306 (729)
|+.+.+..+- + .+....|.+. +|+...+..+ ++......+.....++......+..........
T Consensus 115 L~~i~lp~~~-~-~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~------------ 178 (379)
T 4h09_A 115 LDDFEFPGAT-T-EIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYV------------ 178 (379)
T ss_dssp CSEEECCTTC-C-EECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTE------------
T ss_pred cccccCCCcc-c-cccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccce------------
Confidence 8888776542 2 3443445443 4555544332 222333344444555444333221110000000
Q ss_pred ceeEEEEccCCCCCCCcchhcCCCCCCCEEEccCCcceecCCCCCcCCCCCcEEEecCCCCCCCCcccccCCCCCcEEEc
Q 046589 307 LQIFTFSAGMNQLSGPLPSWLGKWNQMESVWLNNNQFIGRIPLEVGNCSMLKYIRLSNNKLSGSIPRELNDSESLVEINL 386 (729)
Q Consensus 307 l~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 386 (729)
.. +. .......+.....+..+.+.... .......+..+.+|+.+.+..+ +.......+..+..|+.+.+
T Consensus 179 ----~~----~~-~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~l 247 (379)
T 4h09_A 179 ----LY----NK-NKTILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAI 247 (379)
T ss_dssp ----EE----ET-TSSEEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEE
T ss_pred ----ec----cc-ccceeccccccccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEc
Confidence 00 00 00111112222333333333221 1223344555566666666543 33233445556666666666
Q ss_pred CCCCCCCCccccccccCCCCCCcEEEcCCCcCcccCCcccCCCCCCCEEEccCCccccccCcCccCCCCCCEEEcccccC
Q 046589 387 DGNMLSGTIEDVFGRCTNLSQLEKLDLSSNMLTGRIPKEIGNLRSIQILKLNSNFFNGSIPMRLGDSTSLNILELGNNNL 466 (729)
Q Consensus 387 ~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 466 (729)
..+ ++......| .+..+|+.+.+..+ +.......|.++.+|+.+.+.++.++..-..+|.++.+|+.+.|..+ +
T Consensus 248 p~~-v~~I~~~aF---~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l 321 (379)
T 4h09_A 248 PKN-VTSIGSFLL---QNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-L 321 (379)
T ss_dssp CTT-CCEECTTTT---TTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-C
T ss_pred CCC-ccEeCcccc---ceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-c
Confidence 544 332222333 23344555665433 33334455666667777766666665444556666666666666543 4
Q ss_pred CccCchhhhcCCCCCEEeCCC
Q 046589 467 NGSIPEKIADLAQLQFLDLSY 487 (729)
Q Consensus 467 ~~~~p~~l~~l~~L~~LdLs~ 487 (729)
+..-..+|.++.+|+.+.+..
T Consensus 322 ~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 322 KTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp CEECTTTTTTCTTCCCCCCCT
T ss_pred cEEHHHHhhCCCCCCEEEECC
Confidence 434445666666666665543
No 406
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=98.44 E-value=2.6e-08 Score=111.81 Aligned_cols=75 Identities=19% Similarity=0.214 Sum_probs=59.2
Q ss_pred cccccceEecCCccEEEeecCCccccCCCCCcc------eecccccccccCccccCC--CCCCchhhHHHHHHHHHHHHh
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLISDCKSHI------STDVASAISYVPPEYGRA--RKANERDNIYRFGVVLLELVI 696 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~~~~~~~~------~~~~~~~~~y~ape~~~~--~~~~~~~Dv~s~G~vl~el~t 696 (729)
|+||+||+++. .+|++|||+++......... .....+|.+|+|||.... ..|+...|+|+..+-..+-+.
T Consensus 456 DiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~ 533 (540)
T 3en9_A 456 DLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVE 533 (540)
T ss_dssp TCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHH
T ss_pred CCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 99999999998 99999999999865321111 124578999999998765 567788899999998888887
Q ss_pred CCCCC
Q 046589 697 RKQPT 701 (729)
Q Consensus 697 g~~p~ 701 (729)
++.++
T Consensus 534 ~r~rY 538 (540)
T 3en9_A 534 RRARY 538 (540)
T ss_dssp TCSCC
T ss_pred hcccc
Confidence 77553
No 407
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.35 E-value=4.7e-08 Score=93.44 Aligned_cols=91 Identities=16% Similarity=0.147 Sum_probs=44.8
Q ss_pred cCCCCCCCcEEECCCC-CCCCC----CcccccCCCCCCEEeccCCcCcccC----CccccCCCCCcEEEeeccCCCcc--
Q 046589 124 LLFDLSKLRVLNLSQN-LLFGQ----PSPQVSNLKRLKMLSLGENQLSGSL----PSQLGVLTWLETLSLCSNSFTGE-- 192 (729)
Q Consensus 124 ~l~~L~~L~~L~Ls~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~----p~~l~~L~~L~~L~Ls~N~l~~~-- 192 (729)
.+...++|++|+|++| .+... +...+...++|++|+|++|.|.... ...+...+.|++|+|++|.+...
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3444566667777766 65432 2233445566666666666665321 22233334555555555555421
Q ss_pred --CCccccCCCCCcEEEc--cCCCCC
Q 046589 193 --MPSELGDMKQLKSLDF--SGNGFN 214 (729)
Q Consensus 193 --~p~~l~~l~~L~~L~L--s~N~l~ 214 (729)
+...+...+.|++|+| ++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2233344444444444 444443
No 408
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.35 E-value=3.8e-08 Score=99.02 Aligned_cols=80 Identities=26% Similarity=0.369 Sum_probs=39.2
Q ss_pred CCCCCcEEEeeccCCCc--cCCccccCCCCCcEEEccCCCCCCCCccccCCCC--CCCeeeccCCcCCCCCC------hh
Q 046589 175 VLTWLETLSLCSNSFTG--EMPSELGDMKQLKSLDFSGNGFNGTVPIRLGELT--RLQDLDLSDNLLSGSLT------VS 244 (729)
Q Consensus 175 ~L~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~--~L~~L~L~~N~l~~~~~------~~ 244 (729)
++++|++|+|++|++++ .+|..+..+++|+.|+|++|++++. ..+..+. +|++|+|++|.+.+.++ ..
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 34555555555555554 2334445555666666666655532 1222222 55555555555544333 12
Q ss_pred hhccCCCCCEEE
Q 046589 245 LFTNLQSLSYLD 256 (729)
Q Consensus 245 ~~~~l~~L~~L~ 256 (729)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 344555555554
No 409
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.26 E-value=2e-07 Score=89.04 Aligned_cols=62 Identities=23% Similarity=0.332 Sum_probs=27.7
Q ss_pred CCCCCEEEccCCccccc----cCcCccCCCCCCEEEc--ccccCCcc----CchhhhcCCCCCEEeCCCCcC
Q 046589 429 LRSIQILKLNSNFFNGS----IPMRLGDSTSLNILEL--GNNNLNGS----IPEKIADLAQLQFLDLSYNNL 490 (729)
Q Consensus 429 l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L--s~N~l~~~----~p~~l~~l~~L~~LdLs~N~l 490 (729)
.++|++|+|++|.|... +...+...++|+.|+| ++|.+... +.+.+...++|+.|+|++|.+
T Consensus 92 n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 92 NNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp CSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred CCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 34455555555544422 2233334444555555 44555432 222333344555555555544
No 410
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.18 E-value=8.6e-07 Score=89.10 Aligned_cols=102 Identities=25% Similarity=0.252 Sum_probs=68.5
Q ss_pred CCCCcE--EECCCCCCCC---CCcccccCCCCCCEEeccCCcCcc--cCCccccCCCCCcEEEeeccCCCccCCccccCC
Q 046589 128 LSKLRV--LNLSQNLLFG---QPSPQVSNLKRLKMLSLGENQLSG--SLPSQLGVLTWLETLSLCSNSFTGEMPSELGDM 200 (729)
Q Consensus 128 L~~L~~--L~Ls~N~l~~---~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~l 200 (729)
.+.|+. ++++.|.... ...-...++++|+.|+||+|+|++ .+|..+..+++|++|+|++|++++. ..+..+
T Consensus 140 dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l 217 (267)
T 3rw6_A 140 DPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKI 217 (267)
T ss_dssp CHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGG
T ss_pred CcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhc
Confidence 334444 5666664321 111122457788888888888876 4556677888888888888888754 334444
Q ss_pred C--CCcEEEccCCCCCCCCcc-------ccCCCCCCCeee
Q 046589 201 K--QLKSLDFSGNGFNGTVPI-------RLGELTRLQDLD 231 (729)
Q Consensus 201 ~--~L~~L~Ls~N~l~~~~p~-------~l~~l~~L~~L~ 231 (729)
. +|++|+|++|.+.+.+|. .+..+++|+.||
T Consensus 218 ~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 218 KGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp TTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred ccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4 888889988888766552 366788888886
No 411
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.82 E-value=5.3e-06 Score=77.38 Aligned_cols=34 Identities=9% Similarity=0.234 Sum_probs=17.1
Q ss_pred CCcEEECCCCCCCCCCcccccCCCCCCEEeccCC
Q 046589 130 KLRVLNLSQNLLFGQPSPQVSNLKRLKMLSLGEN 163 (729)
Q Consensus 130 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 163 (729)
+|+.||+++|.++..--..+..+++|+.|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4555555555554433333445555555555555
No 412
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.72 E-value=7.4e-06 Score=76.37 Aligned_cols=83 Identities=17% Similarity=0.250 Sum_probs=48.8
Q ss_pred CCCCEEeccCCcCcccCCccccCCCCCcEEEeeccC-CCccCCccccCC----CCCcEEEccCCC-CCCCCccccCCCCC
Q 046589 153 KRLKMLSLGENQLSGSLPSQLGVLTWLETLSLCSNS-FTGEMPSELGDM----KQLKSLDFSGNG-FNGTVPIRLGELTR 226 (729)
Q Consensus 153 ~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~-l~~~~p~~l~~l----~~L~~L~Ls~N~-l~~~~p~~l~~l~~ 226 (729)
.+|+.|||+++.|+...-..+.++++|++|+|++|. ++..--..+..+ ++|++|+|++|. ++...-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 367888888888776655666777777777777774 443222223333 246666666653 54333334445555
Q ss_pred CCeeeccCC
Q 046589 227 LQDLDLSDN 235 (729)
Q Consensus 227 L~~L~L~~N 235 (729)
|++|++++|
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555555555
No 413
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=97.65 E-value=8.9e-06 Score=83.11 Aligned_cols=25 Identities=20% Similarity=0.368 Sum_probs=23.1
Q ss_pred cccccceEecCCccEEEeecCCcccc
Q 046589 625 DIKASNILLNEDFDAKVLDFGLARLI 650 (729)
Q Consensus 625 dlk~~nill~~~~~~kl~dfgl~~~~ 650 (729)
|+||.||+++ ++.+||+|||+|+..
T Consensus 218 Dlkp~NILl~-~~~vkl~DFG~a~~~ 242 (282)
T 1zar_A 218 DLSQYNVLVS-EEGIWIIDFPQSVEV 242 (282)
T ss_dssp CCSTTSEEEE-TTEEEECCCTTCEET
T ss_pred CCCHHHEEEE-CCcEEEEECCCCeEC
Confidence 9999999999 999999999998653
No 414
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.84 E-value=0.00019 Score=68.12 Aligned_cols=62 Identities=21% Similarity=0.225 Sum_probs=28.5
Q ss_pred CCCcEEECCCC-CCCCC----CcccccCCCCCCEEeccCCcCcccCCcc----ccCCCCCcEEEeeccCCC
Q 046589 129 SKLRVLNLSQN-LLFGQ----PSPQVSNLKRLKMLSLGENQLSGSLPSQ----LGVLTWLETLSLCSNSFT 190 (729)
Q Consensus 129 ~~L~~L~Ls~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~----l~~L~~L~~L~Ls~N~l~ 190 (729)
+.|+.|+|++| +|... +...+..-+.|+.|+|++|+|....-.. +..-+.|++|+|++|.|.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 44555666553 44321 1223344455666666666665322222 223344555555555544
No 415
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.80 E-value=0.00059 Score=64.71 Aligned_cols=112 Identities=13% Similarity=0.116 Sum_probs=73.2
Q ss_pred cCCCCCCEEeccCC-cCccc----CCccccCCCCCcEEEeeccCCCc----cCCccccCCCCCcEEEccCCCCCCC----
Q 046589 150 SNLKRLKMLSLGEN-QLSGS----LPSQLGVLTWLETLSLCSNSFTG----EMPSELGDMKQLKSLDFSGNGFNGT---- 216 (729)
Q Consensus 150 ~~l~~L~~L~Ls~N-~l~~~----~p~~l~~L~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~---- 216 (729)
.+-+.|+.|+|++| +|... +-+.+..-+.|++|+|++|.+.. .+...+..-+.|++|+|+.|.|...
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 45568999999985 77532 33445666788999999998863 3344455677888888888888743
Q ss_pred CccccCCCCCCCeeeccCCcCCCCCC-------hhhhccCCCCCEEEcccccc
Q 046589 217 VPIRLGELTRLQDLDLSDNLLSGSLT-------VSLFTNLQSLSYLDVSNNLL 262 (729)
Q Consensus 217 ~p~~l~~l~~L~~L~L~~N~l~~~~~-------~~~~~~l~~L~~L~Ls~N~l 262 (729)
+-+.+..-+.|++|+|++|... .+. ...+..-+.|+.|+++.|.+
T Consensus 118 la~aL~~N~tL~~L~L~n~~~~-~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQRQS-VLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHTTTTCCCSEEECCCCSSC-CCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHhhCCceeEEECCCCcCc-CcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 2334455567888888765321 111 13345566777787776654
No 416
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.27 E-value=0.0081 Score=53.00 Aligned_cols=56 Identities=21% Similarity=0.262 Sum_probs=36.6
Q ss_pred EEEccCCccc-cccCcCccCCCCCCEEEcccccCCccCchhhhcCCCCCEEeCCCCcCc
Q 046589 434 ILKLNSNFFN-GSIPMRLGDSTSLNILELGNNNLNGSIPEKIADLAQLQFLDLSYNNLS 491 (729)
Q Consensus 434 ~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~ 491 (729)
.++.+++.++ ..+|..+ ..+|+.|+|++|+|+...+..|..+++|+.|+|++|++.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555554 2344332 235777788888877666667777888888888888763
No 417
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.14 E-value=0.0078 Score=53.11 Aligned_cols=36 Identities=22% Similarity=0.296 Sum_probs=17.5
Q ss_pred CCcEEEeeccCCCccCCccccCCCCCcEEEccCCCC
Q 046589 178 WLETLSLCSNSFTGEMPSELGDMKQLKSLDFSGNGF 213 (729)
Q Consensus 178 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 213 (729)
+|++|+|++|+|+...+..|..+++|++|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 344555555555443344444455555555555544
No 418
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=95.96 E-value=0.0028 Score=66.90 Aligned_cols=29 Identities=21% Similarity=0.249 Sum_probs=25.9
Q ss_pred cccccCCCCCCcceEEEeecCCCCceeee
Q 046589 595 FCEKNGIGGGGFGTVFKGTMPDGKTVAVK 623 (729)
Q Consensus 595 ~~~~~~ig~g~~~~v~k~~~~~~~~~avk 623 (729)
+.....||.|++|.||+|...+|+.||||
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvK 125 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLK 125 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEE
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEE
Confidence 34556799999999999999999999999
No 419
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=94.33 E-value=0.019 Score=57.28 Aligned_cols=29 Identities=24% Similarity=0.381 Sum_probs=26.3
Q ss_pred eeeccccccceEecCCccEEEeecCCccccC
Q 046589 621 AVKKDIKASNILLNEDFDAKVLDFGLARLIS 651 (729)
Q Consensus 621 avk~dlk~~nill~~~~~~kl~dfgl~~~~~ 651 (729)
.||+|+||.||+++. .++++|||+|....
T Consensus 192 ivHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 192 LVHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp EECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred EEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 789999999999998 99999999997653
No 420
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=91.41 E-value=0.029 Score=57.35 Aligned_cols=83 Identities=14% Similarity=0.196 Sum_probs=51.2
Q ss_pred CCCceeeeccccccceEecC--CccEEEeecCCccccCCCCCccee-------------cccccccccC-ccccCCCCCC
Q 046589 616 DGKTVAVKKDIKASNILLNE--DFDAKVLDFGLARLISDCKSHIST-------------DVASAISYVP-PEYGRARKAN 679 (729)
Q Consensus 616 ~~~~~avk~dlk~~nill~~--~~~~kl~dfgl~~~~~~~~~~~~~-------------~~~~~~~y~a-pe~~~~~~~~ 679 (729)
...++.+|.|+++.||+++. +..+.+.||+.+....+..+-... .....+++.. |+.. ....
T Consensus 188 ~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~--~r~~ 265 (304)
T 3sg8_A 188 KYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVL--EKYR 265 (304)
T ss_dssp CCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHH--HHHH
T ss_pred cCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHH--HHHH
Confidence 45678999999999999997 567889999987653321000000 0000011111 2211 1112
Q ss_pred chhhHHHHHHHHHHHHhCCCC
Q 046589 680 ERDNIYRFGVVLLELVIRKQP 700 (729)
Q Consensus 680 ~~~Dv~s~G~vl~el~tg~~p 700 (729)
...+.|++|+++|++.+|..+
T Consensus 266 ~~~~~~~l~~~~~~~~~g~~~ 286 (304)
T 3sg8_A 266 MKEKYWSFEKIIYGKEYGYMD 286 (304)
T ss_dssp HHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHcCCHH
Confidence 235899999999999999866
No 421
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=79.34 E-value=1 Score=43.95 Aligned_cols=34 Identities=18% Similarity=0.190 Sum_probs=28.9
Q ss_pred CCCceeeeccccccceEecCCccEEEeecCCccc
Q 046589 616 DGKTVAVKKDIKASNILLNEDFDAKVLDFGLARL 649 (729)
Q Consensus 616 ~~~~~avk~dlk~~nill~~~~~~kl~dfgl~~~ 649 (729)
....+.+|+|+++.||+++.+..+.+.||+.+..
T Consensus 181 ~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 181 GEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp SCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 3457899999999999999887788999997754
No 422
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=78.74 E-value=0.46 Score=48.90 Aligned_cols=31 Identities=39% Similarity=0.546 Sum_probs=27.0
Q ss_pred cccccccCCCCCCcceEEEeecCCCCceeeec
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMPDGKTVAVKK 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~~~~~~avk~ 624 (729)
+.|.....||+|+||+||+|+. +|+.||||.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~ 50 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKI 50 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEE
Confidence 4566677899999999999998 789999997
No 423
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=71.09 E-value=2.4 Score=41.47 Aligned_cols=34 Identities=21% Similarity=0.302 Sum_probs=28.8
Q ss_pred CCCceeeeccccccceEecCCccEEEeecCCccc
Q 046589 616 DGKTVAVKKDIKASNILLNEDFDAKVLDFGLARL 649 (729)
Q Consensus 616 ~~~~~avk~dlk~~nill~~~~~~kl~dfgl~~~ 649 (729)
....+.+|.|+++.||+++.+..+.|.||+.+..
T Consensus 180 ~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 180 EEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp CCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred CCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 4568899999999999998877778999997654
No 424
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=70.04 E-value=1.4 Score=45.98 Aligned_cols=32 Identities=19% Similarity=0.025 Sum_probs=27.4
Q ss_pred cccccccCCCCCCcceEEEeecC-CCCceeeec
Q 046589 593 NKFCEKNGIGGGGFGTVFKGTMP-DGKTVAVKK 624 (729)
Q Consensus 593 ~~~~~~~~ig~g~~~~v~k~~~~-~~~~~avk~ 624 (729)
..+.....+|.|+||.||+|+.. +|+.||||.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~ 94 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKV 94 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEE
Confidence 34667778999999999999974 888999996
No 425
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=69.84 E-value=1.3 Score=43.68 Aligned_cols=28 Identities=36% Similarity=0.293 Sum_probs=24.6
Q ss_pred cccCCCCCCcceEEEeec-CCCCc--eeeec
Q 046589 597 EKNGIGGGGFGTVFKGTM-PDGKT--VAVKK 624 (729)
Q Consensus 597 ~~~~ig~g~~~~v~k~~~-~~~~~--~avk~ 624 (729)
....||.|+||.||+|.. .+|+. ||||.
T Consensus 51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~ 81 (258)
T 1zth_A 51 MGGVISTGKEANVFYADGVFDGKPVAMAVKI 81 (258)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEE
T ss_pred hCCEEeecceEEEEEEEEcCCCcEeeEEEEE
Confidence 446799999999999998 78888 99995
No 426
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=61.25 E-value=4.9 Score=41.44 Aligned_cols=33 Identities=27% Similarity=0.310 Sum_probs=27.8
Q ss_pred CceeeeccccccceEecCCc--cEEEeecCCcccc
Q 046589 618 KTVAVKKDIKASNILLNEDF--DAKVLDFGLARLI 650 (729)
Q Consensus 618 ~~~avk~dlk~~nill~~~~--~~kl~dfgl~~~~ 650 (729)
..+.||+|+++.||+++.++ .+.|.||+.+...
T Consensus 215 ~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 215 LTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp CCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred CceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 47899999999999999764 3689999988753
No 427
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=54.67 E-value=7.5 Score=38.03 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=29.5
Q ss_pred CCCceeeeccccccceEecCCccEEEeecCCccc
Q 046589 616 DGKTVAVKKDIKASNILLNEDFDAKVLDFGLARL 649 (729)
Q Consensus 616 ~~~~~avk~dlk~~nill~~~~~~kl~dfgl~~~ 649 (729)
....+.||.|+.+.||+++.++.+-|.||+.+..
T Consensus 190 ~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 190 SPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 4567899999999999999888888999997765
No 428
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=54.41 E-value=7.1 Score=39.53 Aligned_cols=36 Identities=22% Similarity=0.276 Sum_probs=30.5
Q ss_pred CCCceeeeccccccceEecCCccEEEeecCCccccC
Q 046589 616 DGKTVAVKKDIKASNILLNEDFDAKVLDFGLARLIS 651 (729)
Q Consensus 616 ~~~~~avk~dlk~~nill~~~~~~kl~dfgl~~~~~ 651 (729)
.+..+.+|.|+++.||+++.+..+.+.||+.+....
T Consensus 204 ~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 204 KYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp CCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred cCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 456789999999999999997778999999886543
No 429
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=49.16 E-value=7.9 Score=39.28 Aligned_cols=32 Identities=22% Similarity=0.278 Sum_probs=28.1
Q ss_pred CceeeeccccccceEecCCccEEEeecCCccc
Q 046589 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARL 649 (729)
Q Consensus 618 ~~~avk~dlk~~nill~~~~~~kl~dfgl~~~ 649 (729)
..+.+|+|+++.||+++.++.+.+.||+.+..
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 46789999999999998888899999997754
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=44.93 E-value=12 Score=39.57 Aligned_cols=33 Identities=12% Similarity=0.261 Sum_probs=28.3
Q ss_pred CCceeeeccccccceEecCCccEEEeecCCcccc
Q 046589 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARLI 650 (729)
Q Consensus 617 ~~~~avk~dlk~~nill~~~~~~kl~dfgl~~~~ 650 (729)
...+.+|.|+++.||+++.++ +++.||+.+...
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G 262 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG 262 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence 457899999999999998776 899999987653
No 431
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=44.84 E-value=15 Score=36.95 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=28.4
Q ss_pred CCceeeeccccccceEecC----CccEEEeecCCccccC
Q 046589 617 GKTVAVKKDIKASNILLNE----DFDAKVLDFGLARLIS 651 (729)
Q Consensus 617 ~~~~avk~dlk~~nill~~----~~~~kl~dfgl~~~~~ 651 (729)
...+.||.|+++.||+++. +..+.|.||+.+....
T Consensus 188 ~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd 226 (306)
T 3tdw_A 188 YTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISD 226 (306)
T ss_dssp CCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEEC
T ss_pred CCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCC
Confidence 5678999999999999987 3446899999776543
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=44.09 E-value=15 Score=37.18 Aligned_cols=35 Identities=34% Similarity=0.439 Sum_probs=29.2
Q ss_pred CCceeeeccccccceEecCC----ccEEEeecCCccccC
Q 046589 617 GKTVAVKKDIKASNILLNED----FDAKVLDFGLARLIS 651 (729)
Q Consensus 617 ~~~~avk~dlk~~nill~~~----~~~kl~dfgl~~~~~ 651 (729)
...+.||+|+.+.||+++.+ ..+.|.||+.+....
T Consensus 181 ~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 181 GDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp SCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred CCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 35689999999999999874 688999999876543
No 433
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=42.56 E-value=12 Score=38.58 Aligned_cols=32 Identities=22% Similarity=0.242 Sum_probs=28.6
Q ss_pred ceeeeccccccceEecCCccEEEeecCCcccc
Q 046589 619 TVAVKKDIKASNILLNEDFDAKVLDFGLARLI 650 (729)
Q Consensus 619 ~~avk~dlk~~nill~~~~~~kl~dfgl~~~~ 650 (729)
++.||.|+++.||+++.+..+.|.||+.+...
T Consensus 213 ~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 213 RHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp CEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred cEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 78999999999999998888899999987653
No 434
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=41.26 E-value=26 Score=33.27 Aligned_cols=75 Identities=12% Similarity=0.134 Sum_probs=39.0
Q ss_pred ccceEecCCccEEEeecCCccccCCCCCcceecccccccccCccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC--Cc
Q 046589 628 ASNILLNEDFDAKVLDFGLARLISDCKSHISTDVASAISYVPPEYGRARKANERDNIYRFGVVLLELVIRKQPTGP--KF 705 (729)
Q Consensus 628 ~~nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~--~~ 705 (729)
+..|++..+|.+...+ ..+. .....+.|||... ...+++.=|||+|+++|.-+-=.-|.+. ..
T Consensus 78 ~~~i~l~~dG~V~f~~-~~s~-------------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~eE~eL 142 (229)
T 2yle_A 78 AAQIRVWRDGAVTLAP-AADD-------------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENEEREL 142 (229)
T ss_dssp GGGEEEETTSCEEECC-C-------------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTEEECC
T ss_pred CcceEEecCCceeccc-cccc-------------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcccchhh
Confidence 4567777788877542 1110 0112356788764 3557888999999999986643333221 22
Q ss_pred ch--HHHHhhcccC
Q 046589 706 ED--KDIVVGCVSD 717 (729)
Q Consensus 706 ~~--~~l~~~c~~~ 717 (729)
.+ +.|+..|...
T Consensus 143 S~~LE~LL~~Mt~~ 156 (229)
T 2yle_A 143 SPPLEQLIDHMANT 156 (229)
T ss_dssp CHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHhc
Confidence 22 2566666544
No 435
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=41.17 E-value=15 Score=36.98 Aligned_cols=32 Identities=19% Similarity=0.210 Sum_probs=27.4
Q ss_pred CceeeeccccccceEecCCccEEEeecCCccc
Q 046589 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARL 649 (729)
Q Consensus 618 ~~~avk~dlk~~nill~~~~~~kl~dfgl~~~ 649 (729)
..+.+|.|+.+.||+++.+..+.+.||+.+..
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 46789999999999999887778999987654
No 436
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=40.76 E-value=13 Score=38.10 Aligned_cols=32 Identities=25% Similarity=0.364 Sum_probs=27.5
Q ss_pred CceeeeccccccceEecCCccEEEeecCCccc
Q 046589 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARL 649 (729)
Q Consensus 618 ~~~avk~dlk~~nill~~~~~~kl~dfgl~~~ 649 (729)
..+.||.|+.+.||+++++..+.|.||..+..
T Consensus 221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp CCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred CceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence 57899999999999999766678999987765
No 437
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=28.70 E-value=30 Score=34.76 Aligned_cols=31 Identities=29% Similarity=0.306 Sum_probs=25.9
Q ss_pred CCceeeeccccccceEecCCccEEEeecCCccc
Q 046589 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARL 649 (729)
Q Consensus 617 ~~~~avk~dlk~~nill~~~~~~kl~dfgl~~~ 649 (729)
...+.+|.|+++.||+++ + .+.+.||.-+..
T Consensus 193 ~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 193 FTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 346789999999999999 4 889999986654
No 438
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=24.42 E-value=43 Score=34.36 Aligned_cols=31 Identities=19% Similarity=0.428 Sum_probs=25.2
Q ss_pred CceeeeccccccceEecCCccEEEeecCCccc
Q 046589 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARL 649 (729)
Q Consensus 618 ~~~avk~dlk~~nill~~~~~~kl~dfgl~~~ 649 (729)
..+.+|.|+++.||+++.+. +.+.||..+..
T Consensus 211 ~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~ 241 (369)
T 3c5i_A 211 TIVFCHNDLQENNIINTNKC-LRLIDFEYSGF 241 (369)
T ss_dssp CEEEECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred CeEEEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence 46789999999999998655 78999986653
No 439
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=23.93 E-value=36 Score=34.61 Aligned_cols=33 Identities=27% Similarity=0.414 Sum_probs=28.5
Q ss_pred CCceeeeccccccceEecCCccEEEeecCCccc
Q 046589 617 GKTVAVKKDIKASNILLNEDFDAKVLDFGLARL 649 (729)
Q Consensus 617 ~~~~avk~dlk~~nill~~~~~~kl~dfgl~~~ 649 (729)
...+.+|.|+.+.||+++.++.+.+.||..+..
T Consensus 204 ~~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 204 DKYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GGCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CCceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 457889999999999999888899999986655
No 440
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=23.77 E-value=47 Score=32.87 Aligned_cols=33 Identities=15% Similarity=0.122 Sum_probs=26.6
Q ss_pred CCCceeeeccccccceEecCCccEEEeecCCccc
Q 046589 616 DGKTVAVKKDIKASNILLNEDFDAKVLDFGLARL 649 (729)
Q Consensus 616 ~~~~~avk~dlk~~nill~~~~~~kl~dfgl~~~ 649 (729)
....+.+|.|+.+.||+ ..++.+.+.||..+..
T Consensus 170 ~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 170 PLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 34578899999999999 5566679999987754
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=23.00 E-value=53 Score=35.01 Aligned_cols=18 Identities=28% Similarity=0.298 Sum_probs=15.9
Q ss_pred CCceeeeccccccceEec
Q 046589 617 GKTVAVKKDIKASNILLN 634 (729)
Q Consensus 617 ~~~~avk~dlk~~nill~ 634 (729)
...+.+|.|+.+.||+++
T Consensus 288 ~~~v~cHnDl~~gNIL~~ 305 (458)
T 2qg7_A 288 SPIVLCHCDLLSSNIINT 305 (458)
T ss_dssp CCEEEECSCCCGGGEEEC
T ss_pred CCeeEEecCCCCCcEEee
Confidence 356889999999999998
No 442
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=21.98 E-value=43 Score=35.39 Aligned_cols=33 Identities=24% Similarity=0.353 Sum_probs=25.9
Q ss_pred CCceeeeccccccceEecCC----------------------------ccEEEeecCCccc
Q 046589 617 GKTVAVKKDIKASNILLNED----------------------------FDAKVLDFGLARL 649 (729)
Q Consensus 617 ~~~~avk~dlk~~nill~~~----------------------------~~~kl~dfgl~~~ 649 (729)
...+.+|.|+.+.||+++.+ ..+.+.||..+..
T Consensus 247 ~~~v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~~ 307 (429)
T 1nw1_A 247 SPVTFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASY 307 (429)
T ss_dssp CCEEEECSCCCGGGEEEEC------------------------------CCEECCCTTCEE
T ss_pred CCeEEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCCc
Confidence 35678999999999999875 6788999976654
No 443
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=21.27 E-value=58 Score=33.70 Aligned_cols=32 Identities=22% Similarity=0.246 Sum_probs=26.3
Q ss_pred CceeeeccccccceEecCCccEEEeecCCcccc
Q 046589 618 KTVAVKKDIKASNILLNEDFDAKVLDFGLARLI 650 (729)
Q Consensus 618 ~~~avk~dlk~~nill~~~~~~kl~dfgl~~~~ 650 (729)
..+.+|.|+.+.||+++.+. +++.||..+...
T Consensus 226 ~~~L~HGDl~~~Nil~~~~~-~~lID~e~a~~G 257 (397)
T 2olc_A 226 AETLIHGDLHTGSIFASEHE-TKVIDPEFAFYG 257 (397)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred CCceeeCCCCcCcEEEeCCC-eEEEeCcccccC
Confidence 46789999999999998664 789999877653
No 444
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=21.27 E-value=2.1e+02 Score=22.89 Aligned_cols=43 Identities=16% Similarity=0.158 Sum_probs=18.7
Q ss_pred CCCCCcccccCCCCCCEEeccCCcCcccCCccccCCCCCcEEEe
Q 046589 141 LFGQPSPQVSNLKRLKMLSLGENQLSGSLPSQLGVLTWLETLSL 184 (729)
Q Consensus 141 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L 184 (729)
++.+...+|.++..|+.+.+-.+ ++.+....|.++.+|+.+.+
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEE
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEE
Confidence 33344445555555555544333 22233334444444444444
No 445
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=20.89 E-value=60 Score=33.63 Aligned_cols=34 Identities=26% Similarity=0.361 Sum_probs=28.5
Q ss_pred CCCceeeeccccccceEecCC----ccEEEeecCCccc
Q 046589 616 DGKTVAVKKDIKASNILLNED----FDAKVLDFGLARL 649 (729)
Q Consensus 616 ~~~~~avk~dlk~~nill~~~----~~~kl~dfgl~~~ 649 (729)
+...+.+|.|+.+.||+++.+ +.+.+.||..+..
T Consensus 217 ~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 217 PSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp CCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred CCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 345788999999999999876 6889999987764
No 446
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=20.28 E-value=1.3e+02 Score=24.22 Aligned_cols=37 Identities=16% Similarity=0.088 Sum_probs=15.0
Q ss_pred ccccCCCCCcEEEccCCCCCCCCccccCCCCCCCeeec
Q 046589 195 SELGDMKQLKSLDFSGNGFNGTVPIRLGELTRLQDLDL 232 (729)
Q Consensus 195 ~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 232 (729)
.+|.++.+|+.+.+..+ ++.+....|.++.+|+.+.+
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEE
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEE
Confidence 34444444444444332 22233333444444444443
Done!