BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046594
(304 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 67/132 (50%), Gaps = 13/132 (9%)
Query: 87 NLTVVAVKARRYMASQT------KLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEF 139
N T VAVK M T + ++EI ++ H N+V LLG+ DG CLV+ +
Sbjct: 47 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG-DDLCLVYVY 105
Query: 140 MQRGSL--RWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE 197
M GSL R + + PL W R IA +AN + ++ I H +I S NILLDE
Sbjct: 106 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQ--GAANGINFLHENHHI-HRDIKSANILLDE 162
Query: 198 LCNAKLAGFGAA 209
AK++ FG A
Sbjct: 163 AFTAKISDFGLA 174
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 67/132 (50%), Gaps = 13/132 (9%)
Query: 87 NLTVVAVKARRYMASQT------KLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEF 139
N T VAVK M T + ++EI ++ H N+V LLG+ DG CLV+ +
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG-DDLCLVYVY 111
Query: 140 MQRGSL--RWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE 197
M GSL R + + PL W R IA +AN + ++ I H +I S NILLDE
Sbjct: 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQ--GAANGINFLHENHHI-HRDIKSANILLDE 168
Query: 198 LCNAKLAGFGAA 209
AK++ FG A
Sbjct: 169 AFTAKISDFGLA 180
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 67/132 (50%), Gaps = 13/132 (9%)
Query: 87 NLTVVAVKARRYMASQT------KLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEF 139
N T VAVK M T + ++EI ++ H N+V LLG+ DG CLV+ +
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG-DDLCLVYVY 111
Query: 140 MQRGSL--RWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE 197
M GSL R + + PL W R IA +AN + ++ I H +I S NILLDE
Sbjct: 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQ--GAANGINFLHENHHI-HRDIKSANILLDE 168
Query: 198 LCNAKLAGFGAA 209
AK++ FG A
Sbjct: 169 AFTAKISDFGLA 180
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 87 NLTVVAVKARRYMASQT------KLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEF 139
N T VAVK M T + ++EI + + H N+V LLG+ DG CLV+ +
Sbjct: 44 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDG-DDLCLVYVY 102
Query: 140 MQRGSL--RWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE 197
GSL R + + PL W R IA +AN + ++ I H +I S NILLDE
Sbjct: 103 XPNGSLLDRLSCLDGTPPLSWHXRCKIAQ--GAANGINFLHENHHI-HRDIKSANILLDE 159
Query: 198 LCNAKLAGFGAA 209
AK++ FG A
Sbjct: 160 AFTAKISDFGLA 171
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 89 TVVAVK---ARRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
T+VAVK R + + + E+ ++ + H N++ L G+ +R LV+ +M GS
Sbjct: 63 TLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER-LLVYPYMANGS 121
Query: 145 LRWNLREKG---GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNA 201
+ LRE+ PLDW KR IAL + + P I H ++ + NILLDE A
Sbjct: 122 VASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 181
Query: 202 KLAGFGAAN 210
+ FG A
Sbjct: 182 VVGDFGLAK 190
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 79 KGDRAVSRNLTVVAVKARRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVF 137
KG A + V +K R + + + E+ ++ + H N++ L G+ +R LV+
Sbjct: 48 KGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER-LLVY 106
Query: 138 EFMQRGSLRWNLREKG---GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL 194
+M GS+ LRE+ PLDW KR IAL + + P I H ++ + NIL
Sbjct: 107 PYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANIL 166
Query: 195 LDELCNAKLAGFGAAN 210
LDE A + FG A
Sbjct: 167 LDEEFEAVVGDFGLAK 182
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E ++K H NIV +G +V E++ RGSL L + G ++R +
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQP-PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 165 ALQIDSANQMVCMYSK-PPIYHGNITSDNILLDELCNAKLAGFG 207
++ D A M ++++ PPI H N+ S N+L+D+ K+ FG
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFG 184
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 20/151 (13%)
Query: 74 GLTLIKGDRAVSRNLTVVAVKARRYMASQTKLE----------EEILLKSSSHLNIVTLL 123
G L+ R V ++ +VVA+K+ S+ + E E ++ + +H NIV L
Sbjct: 31 GFGLVHKGRLV-KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLY 89
Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
G + + +V EF+ G L L +K P+ W +L + L I + + PPI
Sbjct: 90 GLMHNPPR---MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM-QNQNPPI 145
Query: 184 YHGNITSDNILLDELCN-----AKLAGFGAA 209
H ++ S NI L L AK+A FG +
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADFGTS 176
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E ++K H NIV +G +V E++ RGSL L + G ++R +
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQP-PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 165 ALQIDSANQMVCMYSK-PPIYHGNITSDNILLDELCNAKLAGFG 207
++ D A M ++++ PPI H ++ S N+L+D+ K+ FG
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFG 184
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 12/130 (9%)
Query: 106 EEEILLKSSSHLNIVTLLGYPQDGLQRRC---LVFEFMQRGSLRWNLREKGGPLDWEKRL 162
E +IL K S H NI+ L +D + LVF+ M++G L L EK + E R
Sbjct: 73 EVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 163 AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN-C 221
+ + +++C K I H ++ +NILLD+ N KL FG + G R+ C
Sbjct: 129 IMRALL----EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVC 184
Query: 222 EKTSEMAEDI 231
S +A +I
Sbjct: 185 GTPSYLAPEI 194
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 81/203 (39%), Gaps = 35/203 (17%)
Query: 19 YIASPVNRGEQNYGCQFVITIVGSAAVARSVSIALVTLAILKRRRMLKSFGDSVEGLTLI 78
YIA N + QF VG + T +LKR + LK G +G+
Sbjct: 32 YIAKHYNMSKSKVDNQFYSVEVGDS-----------TFTVLKRYQNLKPIGSGAQGIVCA 80
Query: 79 KGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLLGY--PQDGL-- 130
D + RN+ + K R +QT E +L+K +H NI++LL PQ L
Sbjct: 81 AYDAVLDRNVAI--KKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138
Query: 131 -QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVC---MYSKPPIYHG 186
Q LV E M + E LD E R++ L QM+C I H
Sbjct: 139 FQDVYLVMELMDANLCQVIQME----LDHE-RMSYLLY-----QMLCGIKHLHSAGIIHR 188
Query: 187 NITSDNILLDELCNAKLAGFGAA 209
++ NI++ C K+ FG A
Sbjct: 189 DLKPSNIVVKSDCTLKILDFGLA 211
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 20/149 (13%)
Query: 74 GLTLIKGDRAVSRNLTVVAVKARRYMASQTKLE----------EEILLKSSSHLNIVTLL 123
G L+ R V ++ +VVA+K+ S+ + E E ++ + +H NIV L
Sbjct: 31 GFGLVHKGRLV-KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLY 89
Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
G + + +V EF+ G L L +K P+ W +L + L I + + PPI
Sbjct: 90 GLMHNPPR---MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM-QNQNPPI 145
Query: 184 YHGNITSDNILLDELCN-----AKLAGFG 207
H ++ S NI L L AK+A FG
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADFG 174
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 106 EEEILLKSSSHLNIVTLLGYPQDGLQRRC---LVFEFMQRGSLRWNLREKGGPLDWEKRL 162
E +IL K S H NI+ L +D + LVF+ M++G L L EK + E R
Sbjct: 73 EVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 163 AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN-C 221
+ + +++C K I H ++ +NILLD+ N KL FG + G R C
Sbjct: 129 IMRALL----EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC 184
Query: 222 EKTSEMAEDI 231
S +A +I
Sbjct: 185 GTPSYLAPEI 194
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 106 EEEILLKSSSHLNIVTLLGYPQDGLQRRC---LVFEFMQRGSLRWNLREKGGPLDWEKRL 162
E +IL K S H NI+ L +D + LVF+ M++G L L EK + E R
Sbjct: 60 EVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 115
Query: 163 AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN-C 221
+ + +++C K I H ++ +NILLD+ N KL FG + G R C
Sbjct: 116 IMRALL----EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC 171
Query: 222 EKTSEMAEDI 231
S +A +I
Sbjct: 172 GTPSYLAPEI 181
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 81/203 (39%), Gaps = 35/203 (17%)
Query: 19 YIASPVNRGEQNYGCQFVITIVGSAAVARSVSIALVTLAILKRRRMLKSFGDSVEGLTLI 78
YIA N + QF VG + T +LKR + LK G +G+
Sbjct: 32 YIAKHYNMSKSKVDNQFYSVEVGDS-----------TFTVLKRYQNLKPIGSGAQGIVCA 80
Query: 79 KGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLLGY--PQDGL-- 130
D + RN+ + K R +QT E +L+K +H NI++LL PQ L
Sbjct: 81 AYDAVLDRNVAI--KKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138
Query: 131 -QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVC---MYSKPPIYHG 186
Q LV E M + E LD E R++ L QM+C I H
Sbjct: 139 FQDVYLVMELMDANLCQVIQME----LDHE-RMSYLLY-----QMLCGIKHLHSAGIIHR 188
Query: 187 NITSDNILLDELCNAKLAGFGAA 209
++ NI++ C K+ FG A
Sbjct: 189 DLKPSNIVVKSDCTLKILDFGLA 211
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 10/132 (7%)
Query: 82 RAVSRNLTVVAVKARRYMASQ---TKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFE 138
+ V R+ VA+K R +SQ E L H ++V+L+G+ D L+++
Sbjct: 57 KGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF-CDERNEMILIYK 115
Query: 139 FMQRGSLRWNLREKGGP---LDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL 195
+M+ G+L+ +L P + WE+RL I I +A + ++++ I H ++ S NILL
Sbjct: 116 YMENGNLKRHLYGSDLPTMSMSWEQRLEIC--IGAARGLHYLHTRA-IIHRDVKSINILL 172
Query: 196 DELCNAKLAGFG 207
DE K+ FG
Sbjct: 173 DENFVPKITDFG 184
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 10/132 (7%)
Query: 82 RAVSRNLTVVAVKARRYMASQ---TKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFE 138
+ V R+ VA+K R +SQ E L H ++V+L+G+ D L+++
Sbjct: 57 KGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF-CDERNEMILIYK 115
Query: 139 FMQRGSLRWNLREKGGP---LDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL 195
+M+ G+L+ +L P + WE+RL I I +A + ++++ I H ++ S NILL
Sbjct: 116 YMENGNLKRHLYGSDLPTMSMSWEQRLEIC--IGAARGLHYLHTRA-IIHRDVKSINILL 172
Query: 196 DELCNAKLAGFG 207
DE K+ FG
Sbjct: 173 DENFVPKITDFG 184
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 75/178 (42%), Gaps = 24/178 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV +A T +LKR + LK G +G+ D + N+ V K R +QT
Sbjct: 10 SVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKR 67
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +LLK +H NI++LL PQ L Q LV E M + E LD
Sbjct: 68 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME----LDH 123
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS 213
E R++ L QM+C I H ++ NI++ C K+ FG A S
Sbjct: 124 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS 175
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV +A T +LKR + LK G +G+ D + N+ V K R +QT
Sbjct: 12 SVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +LLK +H NI++LL PQ L Q LV E M + E LD
Sbjct: 70 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ C K+ FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV + T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 11 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 68
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +L+K +H NI++LL PQ L Q LV E M + E LD
Sbjct: 69 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDH 124
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ C K+ FG A
Sbjct: 125 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 172
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV + T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 12 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +L+K +H NI++LL PQ L Q LV E M + E LD
Sbjct: 70 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ C K+ FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV + T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 13 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 70
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +L+K +H NI++LL PQ L Q LV E M + E LD
Sbjct: 71 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDH 126
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ C K+ FG A
Sbjct: 127 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV + T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 13 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 70
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +L+K +H NI++LL PQ L Q LV E M + E LD
Sbjct: 71 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDH 126
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ C K+ FG A
Sbjct: 127 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV + T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 12 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +L+K +H NI++LL PQ L Q LV E M + E LD
Sbjct: 70 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ C K+ FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV + T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 6 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 63
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +L+K +H NI++LL PQ L Q LV E M + E LD
Sbjct: 64 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDH 119
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ C K+ FG A
Sbjct: 120 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV + T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 5 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 62
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +L+K +H NI++LL PQ L Q LV E M + E LD
Sbjct: 63 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDH 118
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ C K+ FG A
Sbjct: 119 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV + T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 6 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 63
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +L+K +H NI++LL PQ L Q LV E M + E LD
Sbjct: 64 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDH 119
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ C K+ FG A
Sbjct: 120 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 20/148 (13%)
Query: 74 GLTLIKGDRAVSRNLTVVAVKARRYMASQTKLE----------EEILLKSSSHLNIVTLL 123
G L+ R V ++ +VVA+K+ S+ + E E ++ + +H NIV L
Sbjct: 31 GFGLVHKGRLV-KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLY 89
Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
G + + +V EF+ G L L +K P+ W +L + L I + + PPI
Sbjct: 90 GLMHNPPR---MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM-QNQNPPI 145
Query: 184 YHGNITSDNILLDELCN-----AKLAGF 206
H ++ S NI L L AK+A F
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADF 173
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV I T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 12 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +L+K +H NI+ LL PQ L Q +V E M + E LD
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ C K+ FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV I T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 12 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +L+K +H NI+ LL PQ L Q +V E M + E LD
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ C K+ FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV I T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 14 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 71
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +L+K +H NI+ LL PQ L Q +V E M + E LD
Sbjct: 72 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDH 127
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ C K+ FG A
Sbjct: 128 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 175
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV I T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 13 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 70
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +L+K +H NI+ LL PQ L Q +V E M + E LD
Sbjct: 71 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDH 126
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ C K+ FG A
Sbjct: 127 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV I T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 6 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 63
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +L+K +H NI+ LL PQ L Q +V E M + E LD
Sbjct: 64 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDH 119
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ C K+ FG A
Sbjct: 120 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV I T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 12 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +L+K +H NI+ LL PQ L Q +V E M + E LD
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ C K+ FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV I T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 12 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +L+K +H NI+ LL PQ L Q +V E M + E LD
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ C K+ FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV I T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 17 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 74
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +L+K +H NI+ LL PQ L Q +V E M + E LD
Sbjct: 75 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDH 130
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ C K+ FG A
Sbjct: 131 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 178
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 71/177 (40%), Gaps = 30/177 (16%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV I T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 12 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKR 161
E +L+K +H NI+ LL PQ L+ V+ M+ +D
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-------------MDANLS 116
Query: 162 LAIALQIDSAN------QMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
I +++D QM+C I H ++ NI++ C K+ FG A
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV I T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 12 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +L+K +H NI+ LL PQ L Q +V E M + E LD
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ C K+ FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E I++K SH N+++LLG +V +M+ G LR +R + + +
Sbjct: 138 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 197
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
LQ+ A M + SK H ++ + N +LDE K+A FG A
Sbjct: 198 GLQV--AKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 239
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E I++K SH N+++LLG +V +M+ G LR +R + + +
Sbjct: 79 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 138
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
LQ+ A M + SK H ++ + N +LDE K+A FG A
Sbjct: 139 GLQV--AKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E I++K SH N+++LLG +V +M+ G LR +R + + +
Sbjct: 80 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 139
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
LQ+ A M + SK H ++ + N +LDE K+A FG A
Sbjct: 140 GLQV--AKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 181
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E I++K SH N+++LLG +V +M+ G LR +R + + +
Sbjct: 80 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 139
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
LQ+ A M + SK H ++ + N +LDE K+A FG A
Sbjct: 140 GLQV--AKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 181
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E I++K SH N+++LLG +V +M+ G LR +R + + +
Sbjct: 79 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 138
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
LQ+ A M + SK H ++ + N +LDE K+A FG A
Sbjct: 139 GLQV--AKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E I++K SH N+++LLG +V +M+ G LR +R + + +
Sbjct: 77 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 136
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
LQ+ A M + SK + H ++ + N +LDE K+A FG A
Sbjct: 137 GLQV--AKGMKFLASKKFV-HRDLAARNCMLDEKFTVKVADFGLA 178
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E I++K SH N+++LLG +V +M+ G LR +R + + +
Sbjct: 84 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 143
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
LQ+ A M + SK H ++ + N +LDE K+A FG A
Sbjct: 144 GLQV--AKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 185
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E I++K SH N+++LLG +V +M+ G LR +R + + +
Sbjct: 78 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 137
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
LQ+ A M + SK H ++ + N +LDE K+A FG A
Sbjct: 138 GLQV--AKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 179
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E I++K SH N+++LLG +V +M+ G LR +R + + +
Sbjct: 98 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 157
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
LQ+ A M + SK H ++ + N +LDE K+A FG A
Sbjct: 158 GLQV--AKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 199
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E I++K SH N+++LLG +V +M+ G LR +R + + +
Sbjct: 78 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 137
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
LQ+ A M + SK + H ++ + N +LDE K+A FG A
Sbjct: 138 GLQV--AKGMKYLASKKFV-HRDLAARNCMLDEKFTVKVADFGLA 179
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E I++K SH N+++LLG +V +M+ G LR +R + + +
Sbjct: 97 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 156
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
LQ+ A M + SK H ++ + N +LDE K+A FG A
Sbjct: 157 GLQV--AKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 198
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E I++K SH N+++LLG +V +M+ G LR +R + + +
Sbjct: 76 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 135
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
LQ+ A M + SK H ++ + N +LDE K+A FG A
Sbjct: 136 GLQV--AKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 177
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E I++K SH N+++LLG +V +M+ G LR +R + + +
Sbjct: 71 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 130
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
LQ+ A M + SK H ++ + N +LDE K+A FG A
Sbjct: 131 GLQV--AKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 172
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E I++K SH N+++LLG +V +M+ G LR +R + + +
Sbjct: 79 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 138
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
LQ+ A M + SK + H ++ + N +LDE K+A FG A
Sbjct: 139 GLQV--AKGMKYLASKKFV-HRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E I++K SH N+++LLG +V +M+ G LR +R + + +
Sbjct: 77 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 136
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
LQ+ A M + SK + H ++ + N +LDE K+A FG A
Sbjct: 137 GLQV--AKGMKYLASKKFV-HRDLAARNCMLDEKFTVKVADFGLA 178
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E I++K SH N+++LLG +V +M+ G LR +R + + +
Sbjct: 79 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 138
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
LQ+ A M + SK H ++ + N +LDE K+A FG A
Sbjct: 139 GLQV--AKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E I++K SH N+++LLG +V +M+ G LR +R + + +
Sbjct: 74 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 133
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
LQ+ A M + SK + H ++ + N +LDE K+A FG A
Sbjct: 134 GLQV--AKGMKYLASKKFV-HRDLAARNCMLDEKFTVKVADFGLA 175
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV + T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 12 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +L+K +H NI++LL PQ L Q LV E M + E LD
Sbjct: 70 AYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ K+ FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGY- 125
SFG +G GD AV + L V A ++ A + ++ +L+ + H+NI+ +GY
Sbjct: 24 SFGTVYKGKW--HGDVAV-KMLNVTAPTPQQLQAFKNEVG---VLRKTRHVNILLFMGYS 77
Query: 126 --PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
PQ +V ++ + SL +L + +K + IA Q +A M +++K I
Sbjct: 78 TKPQ-----LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ--TARGMDYLHAKS-I 129
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
H ++ S+NI L E K+ FG A S S E+ S
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLS 171
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGY- 125
SFG +G GD AV + L V A ++ A + ++ +L+ + H+NI+ +GY
Sbjct: 36 SFGTVYKGKW--HGDVAV-KMLNVTAPTPQQLQAFKNEVG---VLRKTRHVNILLFMGYS 89
Query: 126 --PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
PQ +V ++ + SL +L + +K + IA Q +A M +++K I
Sbjct: 90 TAPQ-----LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ--TARGMDYLHAKS-I 141
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
H ++ S+NI L E K+ FG A S S E+ S
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGY- 125
SFG +G GD AV + L V A ++ A + ++ +L+ + H+NI+ +GY
Sbjct: 36 SFGTVYKGK--WHGDVAV-KMLNVTAPTPQQLQAFKNEVG---VLRKTRHVNILLFMGYS 89
Query: 126 --PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
PQ +V ++ + SL +L + +K + IA Q +A M +++K I
Sbjct: 90 TKPQ-----LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ--TARGMDYLHAKS-I 141
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
H ++ S+NI L E K+ FG A S S E+ S
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV + T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 12 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
E +L+K +H NI++LL PQ L Q LV E M + E LD
Sbjct: 70 AYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
E R++ L QM+C I H ++ NI++ K+ FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV + T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 12 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFM 140
E +L+K +H NI++LL PQ L Q LV E M
Sbjct: 70 AYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 25/158 (15%)
Query: 88 LTVVAVKARRYMASQ-------TKLEEEILLKSSSHLNIVTLL-GYPQDGLQRRCLVFEF 139
+ ++ V A R Q T+ E IL + + H +I+TL+ Y LVF+
Sbjct: 124 VKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFM--FLVFDL 181
Query: 140 MQRGSLRWNLREKGGPLDWEKR-----LAIALQIDSANQMVCMYSKPPIYHGNITSDNIL 194
M++G L L EK + E R L A+ AN +V H ++ +NIL
Sbjct: 182 MRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIV---------HRDLKPENIL 232
Query: 195 LDELCNAKLAGFGAANYCSGGSNRRN-CEKTSEMAEDI 231
LD+ +L+ FG + + G R C +A +I
Sbjct: 233 LDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEI 270
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 30/177 (16%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV I T +LKR + LK G +G+ + D + RN+ + K R +QT
Sbjct: 12 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKR 161
E +L+K +H NI+ LL PQ L+ V+ M+ +D
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-------------MDANLS 116
Query: 162 LAIALQIDSANQMVCMYS---------KPPIYHGNITSDNILLDELCNAKLAGFGAA 209
I +++D +Y I H ++ NI++ K+ FG A
Sbjct: 117 QVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGY- 125
SFG +G GD AV + L VV ++ A + E +L+ + H+NI+ +GY
Sbjct: 48 SFGTVYKGKW--HGDVAV-KILKVVDPTPEQFQAFRN---EVAVLRKTRHVNILLFMGYM 101
Query: 126 PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYH 185
+D L +V ++ + SL +L + + + IA Q +A M +++K I H
Sbjct: 102 TKDNL---AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQ--TAQGMDYLHAKN-IIH 155
Query: 186 GNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
++ S+NI L E K+ FG A S S + E+ +
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT 195
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGY- 125
SFG +G GD AV + L V A ++ A + ++ +L+ + H+NI+ +GY
Sbjct: 20 SFGTVYKGKW--HGDVAV-KMLNVTAPTPQQLQAFKNEVG---VLRKTRHVNILLFMGYS 73
Query: 126 --PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
PQ +V ++ + SL +L + K + IA Q +A M +++K I
Sbjct: 74 TAPQ-----LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ--TAQGMDYLHAKS-I 125
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
H ++ S+NI L E K+ FG A S S E+ S
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 167
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 70/177 (39%), Gaps = 30/177 (16%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV I T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 12 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKR 161
E +L+K +H NI+ LL PQ L+ V+ M+ +D
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-------------MDANLS 116
Query: 162 LAIALQIDSAN------QMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
I +++D QM+C I H ++ NI++ K+ FG A
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV + T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 5 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 62
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFM 140
E +L+K +H NI++LL PQ L Q LV E M
Sbjct: 63 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGY- 125
SFG +G GD AV + L V A ++ A + ++ +L+ + H+NI+ +GY
Sbjct: 20 SFGTVYKGKW--HGDVAV-KMLNVTAPTPQQLQAFKNEVG---VLRKTRHVNILLFMGYS 73
Query: 126 --PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
PQ +V ++ + SL +L + K + IA Q +A M +++K I
Sbjct: 74 TKPQ-----LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ--TAQGMDYLHAKS-I 125
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
H ++ S+NI L E K+ FG A S S E+ S
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 167
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 70/177 (39%), Gaps = 30/177 (16%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV I T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 12 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKR 161
E +L+K +H NI+ LL PQ L+ V+ M+ +D
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-------------MDANLS 116
Query: 162 LAIALQIDSAN------QMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
I +++D QM+C I H ++ NI++ K+ FG A
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV + T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 12 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFM 140
E +L+K +H NI++LL PQ L Q LV E M
Sbjct: 70 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGY- 125
SFG +G GD AV + L V A ++ A + ++ +L+ + H+NI+ +GY
Sbjct: 22 SFGTVYKGKW--HGDVAV-KMLNVTAPTPQQLQAFKNEVG---VLRKTRHVNILLFMGYS 75
Query: 126 --PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
PQ +V ++ + SL +L + K + IA Q +A M +++K I
Sbjct: 76 TKPQ-----LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ--TAQGMDYLHAKS-I 127
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
H ++ S+NI L E K+ FG A S S E+ S
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 169
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGY- 125
SFG +G GD AV + L V A ++ A + ++ +L+ + H+NI+ +GY
Sbjct: 25 SFGTVYKGKW--HGDVAV-KMLNVTAPTPQQLQAFKNEVG---VLRKTRHVNILLFMGYS 78
Query: 126 --PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
PQ +V ++ + SL +L + K + IA Q +A M +++K I
Sbjct: 79 TKPQ-----LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ--TAQGMDYLHAKS-I 130
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
H ++ S+NI L E K+ FG A S S E+ S
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 172
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGY- 125
SFG +G GD AV + L V A ++ A + ++ +L+ + H+NI+ +GY
Sbjct: 25 SFGTVYKGKW--HGDVAV-KMLNVTAPTPQQLQAFKNEVG---VLRKTRHVNILLFMGYS 78
Query: 126 --PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
PQ +V ++ + SL +L + K + IA Q +A M +++K I
Sbjct: 79 TKPQ-----LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ--TAQGMDYLHAKS-I 130
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
H ++ S+NI L E K+ FG A S S E+ S
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 172
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGY- 125
SFG +G GD AV + L V A ++ A + ++ +L+ + H+NI+ +GY
Sbjct: 20 SFGTVYKGKW--HGDVAV-KMLNVTAPTPQQLQAFKNEVG---VLRKTRHVNILLFMGYS 73
Query: 126 --PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
PQ +V ++ + SL +L + K + IA Q +A M +++K I
Sbjct: 74 TKPQ-----LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ--TAQGMDYLHAKS-I 125
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
H ++ S+NI L E K+ FG A S S E+ S
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 167
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 109
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + C S+RR
Sbjct: 110 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRT 165
Query: 221 C 221
Sbjct: 166 T 166
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 56/127 (44%), Gaps = 17/127 (13%)
Query: 104 KLEEEI-----LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNL--REKGGPL 156
K EEI LLKS H NI+ L +D + LV EF + G L + R K
Sbjct: 88 KFHEEIYNEISLLKSLDHPNIIKLFDVFEDK-KYFYLVTEFYEGGELFEQIINRHKFDEC 146
Query: 157 DWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE---LCNAKLAGFGAANYCS 213
D I QI S +C K I H +I +NILL+ L N K+ FG +++ S
Sbjct: 147 D---AANIMKQILSG---ICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS 200
Query: 214 GGSNRRN 220
R+
Sbjct: 201 KDYKLRD 207
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGY- 125
SFG +G GD AV + L V A ++ A + ++ +L+ + H+NI+ +GY
Sbjct: 47 SFGTVYKGKW--HGDVAV-KMLNVTAPTPQQLQAFKNEVG---VLRKTRHVNILLFMGYS 100
Query: 126 --PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
PQ +V ++ + SL +L + K + IA Q +A M +++K I
Sbjct: 101 TKPQ-----LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ--TAQGMDYLHAKS-I 152
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
H ++ S+NI L E K+ FG A S S E+ S
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 194
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGY- 125
SFG +G GD AV + L V A ++ A + ++ +L+ + H+NI+ +GY
Sbjct: 48 SFGTVYKGKW--HGDVAV-KMLNVTAPTPQQLQAFKNEVG---VLRKTRHVNILLFMGYS 101
Query: 126 --PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
PQ +V ++ + SL +L + K + IA Q +A M +++K I
Sbjct: 102 TKPQ-----LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ--TAQGMDYLHAKS-I 153
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
H ++ S+NI L E K+ FG A S S E+ S
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 195
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGY- 125
SFG +G GD AV + L V A ++ A + ++ +L+ + H+NI+ +GY
Sbjct: 40 SFGTVYKGKW--HGDVAV-KMLNVTAPTPQQLQAFKNEVG---VLRKTRHVNILLFMGYS 93
Query: 126 --PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
PQ +V ++ + SL +L + K + IA Q +A M +++K I
Sbjct: 94 TKPQ-----LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ--TAQGMDYLHAKS-I 145
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
H ++ S+NI L E K+ FG A S S E+ S
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 187
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 91 VAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWN 148
VA+K R M+ + +EE ++ SH +V L G + CLVFEFM+ G L
Sbjct: 34 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI-CLVFEFMEHGCLSDY 92
Query: 149 LREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA 208
LR + G E L + L + + + + + H ++ + N L+ E K++ FG
Sbjct: 93 LRTQRGLFAAETLLGMCLDV---CEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGM 149
Query: 209 ANY 211
+
Sbjct: 150 TRF 152
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 68/177 (38%), Gaps = 30/177 (16%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV I T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 12 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKR 161
E +L+K +H NI+ LL PQ L+ V+ M+ +D
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-------------MDANLS 116
Query: 162 LAIALQIDSANQMVCMY---------SKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
I +++D +Y I H ++ NI++ K+ FG A
Sbjct: 117 QVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGY- 125
SFG +G GD AV + L V A ++ A + ++ +L+ + H+NI+ +GY
Sbjct: 48 SFGTVYKGKW--HGDVAV-KMLNVTAPTPQQLQAFKNEVG---VLRKTRHVNILLFMGYS 101
Query: 126 --PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
PQ +V ++ + SL +L + K + IA Q +A M +++K I
Sbjct: 102 TKPQ-----LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ--TAQGMDYLHAKS-I 153
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
H ++ S+NI L E K+ FG A S S E+ S
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 195
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 68/177 (38%), Gaps = 30/177 (16%)
Query: 48 SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
SV I T +LKR + LK G +G+ D + RN+ + K R +QT
Sbjct: 12 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKR 161
E +L+K +H NI+ LL PQ L+ V+ M+ +D
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-------------MDANLS 116
Query: 162 LAIALQIDSANQMVCMY---------SKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
I +++D +Y I H ++ NI++ K+ FG A
Sbjct: 117 QVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L EI ++S H NI+ + Y D +R L+ EF RG L L +K G D E+
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDR-KRIYLMLEFAPRGELYKEL-QKHGRFD-EQ 114
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A ++ + C K + H +I +N+L+ K+A FG + + R
Sbjct: 115 RSATFMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM 172
Query: 221 C 221
C
Sbjct: 173 C 173
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ RG + L +K D E+
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPRGEVYKEL-QKLSKFD-EQ 113
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + + S+RR
Sbjct: 114 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRT 169
Query: 221 C 221
Sbjct: 170 T 170
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 91 VAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWN 148
VA+K R M+ + +EE ++ SH +V L G + CLVFEFM+ G L
Sbjct: 32 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI-CLVFEFMEHGCLSDY 90
Query: 149 LREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA 208
LR + G E L + L + + + + + H ++ + N L+ E K++ FG
Sbjct: 91 LRTQRGLFAAETLLGMCLDV---CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM 147
Query: 209 ANY 211
+
Sbjct: 148 TRF 150
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 91 VAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWN 148
VA+K R M+ + +EE ++ SH +V L G + CLVFEFM+ G L
Sbjct: 34 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI-CLVFEFMEHGCLSDY 92
Query: 149 LREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA 208
LR + G E L + L + + + + + H ++ + N L+ E K++ FG
Sbjct: 93 LRTQRGLFAAETLLGMCLDV---CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM 149
Query: 209 ANY 211
+
Sbjct: 150 TRF 152
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L EI ++S H NI+ + Y D +R L+ EF RG L L +K G D E+
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDR-KRIYLMLEFAPRGELYKEL-QKHGRFD-EQ 114
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A ++ + C K + H +I +N+L+ K+A FG + + R
Sbjct: 115 RSATFMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM 172
Query: 221 C 221
C
Sbjct: 173 C 173
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ RG + L +K D E+
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPRGEVYKEL-QKLSKFD-EQ 113
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRR 219
R A + + AN + +SK I H +I +N+LL K+A FG + + S+RR
Sbjct: 114 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWSVHAP--SSRR 168
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L EI ++S H NI+ + Y D +R L+ EF RG L L +K G D E+
Sbjct: 59 EHQLRREIEIQSHLRHPNILRMYNYFHDR-KRIYLMLEFAPRGELYKEL-QKHGRFD-EQ 115
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A ++ + C K + H +I +N+L+ K+A FG + + R
Sbjct: 116 RSATFMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM 173
Query: 221 C 221
C
Sbjct: 174 C 174
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 87 NLTVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
N T VAVK + M+ Q LEE L+K+ H +V L + ++ EFM +GS
Sbjct: 35 NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE-EPIYIITEFMAKGS 93
Query: 145 LRWNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL 203
L L+ ++GG + K + + QI A M + K I H ++ + N+L+ E K+
Sbjct: 94 LLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIERKNYI-HRDLRAANVLVSESLMCKI 150
Query: 204 AGFGAA 209
A FG A
Sbjct: 151 ADFGLA 156
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 91 VAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWN 148
VA+K R M+ + +EE ++ SH +V L G + CLVFEFM+ G L
Sbjct: 37 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI-CLVFEFMEHGCLSDY 95
Query: 149 LREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA 208
LR + G E L + L + + + + + H ++ + N L+ E K++ FG
Sbjct: 96 LRTQRGLFAAETLLGMCLDV---CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM 152
Query: 209 ANY 211
+
Sbjct: 153 TRF 155
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 59 LKRRRMLKS--FGDSVEGLTLIKGDR-AVSRNLTVVAVKARRYMASQTKLEEEILLKSSS 115
L++ ++L S FG +G+ + +G+ + + V+ K+ R + Q + + + S
Sbjct: 33 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR-QSFQAVTDHMLAIGSLD 91
Query: 116 HLNIVTLLGY-PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQM 174
H +IV LLG P LQ LV +++ GSL ++R+ G L + L +QI
Sbjct: 92 HAHIVRLLGLCPGSSLQ---LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYY 148
Query: 175 VCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN 210
+ + + H N+ + N+LL ++A FG A+
Sbjct: 149 LEEHG---MVHRNLAARNVLLKSPSQVQVADFGVAD 181
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 59 LKRRRMLKS--FGDSVEGLTLIKGDR-AVSRNLTVVAVKARRYMASQTKLEEEILLKSSS 115
L++ ++L S FG +G+ + +G+ + + V+ K+ R + Q + + + S
Sbjct: 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR-QSFQAVTDHMLAIGSLD 73
Query: 116 HLNIVTLLGY-PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQM 174
H +IV LLG P LQ LV +++ GSL ++R+ G L + L +QI
Sbjct: 74 HAHIVRLLGLCPGSSLQ---LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYY 130
Query: 175 VCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN 210
+ + + H N+ + N+LL ++A FG A+
Sbjct: 131 LEEHG---MVHRNLAARNVLLKSPSQVQVADFGVAD 163
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 100 ASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWE 159
+T L+E +++ H N++ +G +R + E+++ G+LR ++ W
Sbjct: 50 TQRTFLKEVKVMRCLEHPNVLKFIGVLYKD-KRLNFITEYIKGGTLRGIIKSMDSQYPWS 108
Query: 160 KRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
+R++ A I A+ M ++S I H ++ S N L+ E N +A FG A
Sbjct: 109 QRVSFAKDI--ASGMAYLHSM-NIIHRDLNSHNCLVRENKNVVVADFGLA 155
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 22/166 (13%)
Query: 54 VTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKA------RRYMASQTKLEE 107
V +L++ ++K G G+ DR R VVAVK A +T E
Sbjct: 3 VDRHVLRKYELVKKLGKGAYGIVWKSIDR---RTGEVVAVKKIFDAFQNSTDAQRTFREI 59
Query: 108 EILLKSSSHLNIVTLLGYPQ-DGLQRRCLVFEFMQ---RGSLRWNLREKGGPLDWEKRLA 163
IL + S H NIV LL + D + LVF++M+ +R N+ E P+ K+
Sbjct: 60 MILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILE---PV--HKQYV 114
Query: 164 IALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
+ I +++ + H ++ NILL+ C+ K+A FG +
Sbjct: 115 VYQLI----KVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLS 156
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 90 VVAVKARRYMASQT--KLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRC-LVFEFMQRGSL 145
VVAVK ++ + E EI +LKS H NIV G +R L+ E++ GSL
Sbjct: 42 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 101
Query: 146 RWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
R L++ +D K L QI M + +K I H N+ + NIL++ K+
Sbjct: 102 RDYLQKHKERIDHIKLLQYTSQI--CKGMEYLGTKRYI-HRNLATRNILVENENRVKIGD 158
Query: 206 FG 207
FG
Sbjct: 159 FG 160
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 90 VVAVKARRYMASQT--KLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRC-LVFEFMQRGSL 145
VVAVK ++ + E EI +LKS H NIV G +R L+ EF+ GSL
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSL 103
Query: 146 RWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
R L++ +D K L QI M + +K I H ++ + NIL++ K+
Sbjct: 104 REYLQKHKERIDHIKLLQYTSQI--CKGMEYLGTKRYI-HRDLATRNILVENENRVKIGD 160
Query: 206 FG 207
FG
Sbjct: 161 FG 162
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 89 TVVAVKA-RRYMASQTK---LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
T+VAVK+ R + K L+E +LK SH NIV L+G Q +V E +Q G
Sbjct: 140 TLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK-QPIYIVMELVQGGD 198
Query: 145 LRWNLREKGGPLDWEKRLAIALQI--DSANQMVCMYSKPPIYHGNITSDNILLDELCNAK 202
LR +G L R+ LQ+ D+A M + SK I H ++ + N L+ E K
Sbjct: 199 FLTFLRTEGARL----RVKTLLQMVGDAAAGMEYLESKCCI-HRDLAARNCLVTEKNVLK 253
Query: 203 LAGFGAANYCSGG 215
++ FG + + G
Sbjct: 254 ISDFGMSREEADG 266
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 89 TVVAVKA-RRYMASQTK---LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
T+VAVK+ R + K L+E +LK SH NIV L+G Q +V E +Q G
Sbjct: 140 TLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK-QPIYIVMELVQGGD 198
Query: 145 LRWNLREKGGPLDWEKRLAIALQI--DSANQMVCMYSKPPIYHGNITSDNILLDELCNAK 202
LR +G L R+ LQ+ D+A M + SK I H ++ + N L+ E K
Sbjct: 199 FLTFLRTEGARL----RVKTLLQMVGDAAAGMEYLESKCCI-HRDLAARNCLVTEKNVLK 253
Query: 203 LAGFGAANYCSGG 215
++ FG + + G
Sbjct: 254 ISDFGMSREEADG 266
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 13/133 (9%)
Query: 104 KLEEEIL-LKSSSHLNIVTL---LGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWE 159
K+ EI LK H +I+ L + P D +V E++ G L ++ K G LD +
Sbjct: 62 KIRREIQNLKLFRHPHIIKLYQVISTPSDIF----MVMEYVSGGEL-FDYICKNGRLDEK 116
Query: 160 KRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-R 218
+ + QI S V + + H ++ +N+LLD NAK+A FG +N S G R
Sbjct: 117 ESRRLFQQILSG---VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR 173
Query: 219 RNCEKTSEMAEDI 231
+C + A ++
Sbjct: 174 XSCGSPNYAAPEV 186
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 109
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + S+RR+
Sbjct: 110 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRD 165
Query: 221 C 221
Sbjct: 166 T 166
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 112 KSSSHLNIVTL-----LGYPQ-DGLQRRCLVFEFMQRGSLRWNLR--EKGGPLDWEKRLA 163
K S H NIV +G + D Q L+ + +G L L+ E GPL + L
Sbjct: 81 KLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLK 140
Query: 164 IALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS 213
I Q A Q + KPPI H ++ +N+LL KL FG+A S
Sbjct: 141 IFYQTCRAVQHM-HRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS 189
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 111
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + S+RR
Sbjct: 112 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRT 167
Query: 221 C 221
Sbjct: 168 T 168
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 111
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + + S+RR+
Sbjct: 112 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRD 167
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 110
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + S+RR
Sbjct: 111 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRT 166
Query: 221 C 221
Sbjct: 167 T 167
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 87 NLTVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
N T VAVK + M+ Q LEE L+K+ H +V L + ++ E+M +GS
Sbjct: 36 NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE-EPIYIITEYMAKGS 94
Query: 145 LRWNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL 203
L L+ ++GG + K + + QI A M + K I H ++ + N+L+ E K+
Sbjct: 95 LLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIERKNYI-HRDLRAANVLVSESLMCKI 151
Query: 204 AGFGAA 209
A FG A
Sbjct: 152 ADFGLA 157
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 49 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 105
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + S+RR
Sbjct: 106 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRT 161
Query: 221 C 221
Sbjct: 162 T 162
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 111
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + S+RR
Sbjct: 112 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRT 167
Query: 221 C 221
Sbjct: 168 T 168
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Query: 99 MASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDW 158
M+ +EE ++ SH +V L G + CLVFEFM+ G L LR + G
Sbjct: 64 MSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ-APICLVFEFMEHGCLSDYLRTQRGLFAA 122
Query: 159 EKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY 211
E L + L + + + + + H ++ + N L+ E K++ FG +
Sbjct: 123 ETLLGMCLDV---CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 172
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 51 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 107
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + S+RR
Sbjct: 108 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRT 163
Query: 221 C 221
Sbjct: 164 T 164
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDS-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 108
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRR 219
R A + + AN + +SK I H +I +N+LL K+A FG + S+RR
Sbjct: 109 RTATYI-TELANALSYCHSKKVI-HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR 163
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 111
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + S+RR
Sbjct: 112 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRT 167
Query: 221 C 221
Sbjct: 168 T 168
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 112
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + + S+RR
Sbjct: 113 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRT 168
Query: 221 C 221
Sbjct: 169 T 169
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 113
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + + S+RR
Sbjct: 114 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRT 169
Query: 221 C 221
Sbjct: 170 T 170
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYREL-QKLSKFD-EQ 134
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK + H +I +N+LL K+A FG + S+RR+
Sbjct: 135 RTATYI-TELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRD 190
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 108
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + + S+RR
Sbjct: 109 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRT 164
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 108
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRR 219
R A + + AN + +SK I H +I +N+LL K+A FG + + S+RR
Sbjct: 109 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWSVHAP--SSRR 163
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 109
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + S+RR
Sbjct: 110 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRT 165
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 111
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRR 219
R A + + AN + +SK I H +I +N+LL K+A FG + S+RR
Sbjct: 112 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR 166
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 108
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + S+RR
Sbjct: 109 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRT 164
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 108
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRR 219
R A + + AN + +SK I H +I +N+LL K+A FG + + S+RR
Sbjct: 109 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWSVHAP--SSRR 163
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 113
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + + S+RR
Sbjct: 114 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRT 169
Query: 221 C 221
Sbjct: 170 T 170
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 108
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + S+RR
Sbjct: 109 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRT 164
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 113
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + + S+RR
Sbjct: 114 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRT 169
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 110
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRR 219
R A + + AN + +SK I H +I +N+LL K+A FG + S+RR
Sbjct: 111 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR 165
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Query: 62 RRMLKSFGDSVEG----LTLIKGDRAVSRNLTVVAVKARRYMASQTK---LEEEI-LLKS 113
+R LK D EG + L + D VAVK+ + + L++EI +L++
Sbjct: 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRN 79
Query: 114 SSHLNIVTLLGY-PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSAN 172
H NIV G +DG L+ EF+ GSL+ L + ++ +++L A+QI
Sbjct: 80 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQI--CK 137
Query: 173 QMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
M + S+ + H ++ + N+L++ K+ FG
Sbjct: 138 GMDYLGSRQYV-HRDLAARNVLVESEHQVKIGDFG 171
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 111
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRR 219
R A + + AN + +SK I H +I +N+LL K+A FG + + S+RR
Sbjct: 112 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWSVHAP--SSRR 166
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 108
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + + S+RR
Sbjct: 109 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRT 164
Query: 221 C 221
Sbjct: 165 T 165
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 22/143 (15%)
Query: 85 SRNLTVVAVKARR--YMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ 141
+++ +VAVKA + +A++ + E LL + H +IV G DG +VFE+M+
Sbjct: 42 TKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDG-DPLIMVFEYMK 100
Query: 142 RGSLRWNLREKG---------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHG 186
G L LR G G L + L IA QI A+ MV + S+ + H
Sbjct: 101 HGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI--ASGMVYLASQHFV-HR 157
Query: 187 NITSDNILLDELCNAKLAGFGAA 209
++ + N L+ K+ FG +
Sbjct: 158 DLATRNCLVGANLLVKIGDFGMS 180
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 69 EHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYREL-QKLSKFD-EQ 125
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + S+RR
Sbjct: 126 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRT 181
Query: 221 C 221
Sbjct: 182 T 182
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 35.0 bits (79), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSKFD-EQ 108
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + + S+RR
Sbjct: 109 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRT 164
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Query: 62 RRMLKSFGDSVEG----LTLIKGDRAVSRNLTVVAVKARRYMASQTK---LEEEI-LLKS 113
+R LK D EG + L + D VAVK+ + + L++EI +L++
Sbjct: 8 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRN 67
Query: 114 SSHLNIVTLLGY-PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSAN 172
H NIV G +DG L+ EF+ GSL+ L + ++ +++L A+QI
Sbjct: 68 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQI--CK 125
Query: 173 QMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
M + S+ + H ++ + N+L++ K+ FG
Sbjct: 126 GMDYLGSRQYV-HRDLAARNVLVESEHQVKIGDFG 159
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYREL-QKLSKFD-EQ 134
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK + H +I +N+LL K+A FG + S+RR
Sbjct: 135 RTATYI-TELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRT 190
Query: 221 C 221
Sbjct: 191 T 191
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 27/213 (12%)
Query: 17 SFYIASPVNRGEQNYGCQFVITIVGSAAVA----RSVSIA--------LVTLAILKRR-- 62
+F++ +P R E Q V + A A RS S + V+LA K R
Sbjct: 87 TFHVETPEEREEWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVT 146
Query: 63 ----RMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEILLKSSS 115
LK G G ++ ++A R + +K +A L E +L++S
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 116 HLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNL-REKGGPLDWEKRLAIALQIDSANQM 174
H +T L Y R C V E+ G L ++L RE+ D + +I SA +
Sbjct: 207 H-PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED--RARFYGAEIVSA--L 261
Query: 175 VCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
++S+ + + ++ +N++LD+ + K+ FG
Sbjct: 262 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFG 294
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSRFD-EQ 112
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + + S+RR+
Sbjct: 113 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSNGELKIADFGWSVHAP--SSRRD 168
Query: 221 C 221
Sbjct: 169 T 169
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 12/121 (9%)
Query: 104 KLEEEIL-LKSSSHLNIVTL---LGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWE 159
K++ EI LK H +I+ L + P D +V E++ G L + + G + E
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFF----MVMEYVSGGELFDYICKHGRVEEME 112
Query: 160 KRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRR 219
R + QI SA V + + H ++ +N+LLD NAK+A FG +N S G R
Sbjct: 113 AR-RLFQQILSA---VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR 168
Query: 220 N 220
+
Sbjct: 169 D 169
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 34.7 bits (78), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 21/135 (15%)
Query: 90 VVAVKARRYM---ASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
+VAVKA + A Q E LL H +IV G +G + +VFE+M+ G L
Sbjct: 73 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEG-RPLLMVFEYMRHGDLN 131
Query: 147 WNLREKG--------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDN 192
LR G GPL + LA+A Q+ A MV + + H ++ + N
Sbjct: 132 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV--AAGMVYL-AGLHFVHRDLATRN 188
Query: 193 ILLDELCNAKLAGFG 207
L+ + K+ FG
Sbjct: 189 CLVGQGLVVKIGDFG 203
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 13/161 (8%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSS--SHLNIVTLLG 124
+FG VE G + V +K+ + + L E+ + S H NIV LLG
Sbjct: 58 AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 117
Query: 125 YPQDG-----LQRRCL---VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVC 176
G + C + F++R + +E G PL+ L + Q+ A M
Sbjct: 118 ACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV--AQGMAF 175
Query: 177 MYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN 217
+ SK I H ++ + N+LL AK+ FG A SN
Sbjct: 176 LASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 215
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 34.7 bits (78), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 20/147 (13%)
Query: 81 DRAVSRNLTVVAVKARRYMASQTKL-----EEEILLKSSSHLNIVTLLGY-PQDGLQRRC 134
D+ + VAVK + A++ L E E++ H NI+ LLG QDG
Sbjct: 47 DKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLY 104
Query: 135 LVFEFMQRGSLRWNLREKGGP---LDWEKRLAIALQIDSANQMVCMY---------SKPP 182
++ E+ +G+LR LR + P ++ Q+ + + C Y +
Sbjct: 105 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 164
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAA 209
H ++T+ N+L+ E K+A FG A
Sbjct: 165 CIHRDLTARNVLVTENNVMKIADFGLA 191
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.7 bits (78), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 10 LVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 70 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 123
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 34.7 bits (78), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 69/169 (40%), Gaps = 20/169 (11%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSS--SHLNIVTLLG 124
+FG VE G + V +K+ + + L E+ + S H NIV LLG
Sbjct: 50 AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 109
Query: 125 YPQDG-----LQRRCL---VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVC 176
G + C + F++R + +E G PL+ L + Q+ A M
Sbjct: 110 ACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV--AQGMAF 167
Query: 177 MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA-------NYCSGGSNR 218
+ SK I H ++ + N+LL AK+ FG A NY G+ R
Sbjct: 168 LASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 215
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 21/135 (15%)
Query: 90 VVAVKARRYM---ASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
+VAVKA + A Q E LL H +IV G +G + +VFE+M+ G L
Sbjct: 44 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEG-RPLLMVFEYMRHGDLN 102
Query: 147 WNLREKG--------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDN 192
LR G GPL + LA+A Q+ A MV + + H ++ + N
Sbjct: 103 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV--AAGMVYL-AGLHFVHRDLATRN 159
Query: 193 ILLDELCNAKLAGFG 207
L+ + K+ FG
Sbjct: 160 CLVGQGLVVKIGDFG 174
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 60/154 (38%), Gaps = 12/154 (7%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL--EEEILLKSSSHLNIVTLLG 124
+FG +E A R + V +K + L E +IL+ HLN+V LLG
Sbjct: 39 AFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98
Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLA---------IALQIDSANQMV 175
++ EF + G+L LR K K L I A M
Sbjct: 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGME 158
Query: 176 CMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
+ S+ I H ++ + NILL E K+ FG A
Sbjct: 159 FLASRKXI-HRDLAARNILLSEKNVVKICDFGLA 191
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 61/156 (39%), Gaps = 14/156 (8%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL--EEEILLKSSSHLNIVTLLG 124
+FG +E A R + V +K + L E +IL+ HLN+V LLG
Sbjct: 41 AFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 100
Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREKGG------PLDWEKRL-----AIALQIDSANQ 173
++ EF + G+L LR K P D K I A
Sbjct: 101 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKG 160
Query: 174 MVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
M + S+ I H ++ + NILL E K+ FG A
Sbjct: 161 MEFLASRKXI-HRDLAARNILLSEKNVVKICDFGLA 195
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 20/147 (13%)
Query: 81 DRAVSRNLTVVAVKARRYMASQTKL-----EEEILLKSSSHLNIVTLLGY-PQDGLQRRC 134
D+ + VAVK + A++ L E E++ H NI+TLLG QDG
Sbjct: 60 DKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDG--PLY 117
Query: 135 LVFEFMQRGSLRWNLREKGGP---LDWEKRLAIALQIDSANQMVCMY---------SKPP 182
++ E+ +G+LR LR + P ++ Q+ + + C Y +
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAA 209
H ++ + N+L+ E K+A FG A
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 71 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 124
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 71 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 124
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKF 69
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 70 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 123
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 13/133 (9%)
Query: 104 KLEEEIL-LKSSSHLNIVTL---LGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWE 159
K++ EI LK H +I+ L + P D +V E++ G L + + G + E
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFF----MVMEYVSGGELFDYICKHGRVEEME 112
Query: 160 KRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-R 218
R + QI SA V + + H ++ +N+LLD NAK+A FG +N S G R
Sbjct: 113 AR-RLFQQILSA---VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR 168
Query: 219 RNCEKTSEMAEDI 231
+C + A ++
Sbjct: 169 TSCGSPNYAAPEV 181
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 71 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 124
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 70 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 123
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 70 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 123
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 70 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 123
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 70 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 123
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 21/135 (15%)
Query: 90 VVAVKARRYM---ASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
+VAVKA + A Q E LL H +IV G +G + +VFE+M+ G L
Sbjct: 50 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEG-RPLLMVFEYMRHGDLN 108
Query: 147 WNLREKG--------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDN 192
LR G GPL + LA+A Q+ A MV + + H ++ + N
Sbjct: 109 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV--AAGMVYL-AGLHFVHRDLATRN 165
Query: 193 ILLDELCNAKLAGFG 207
L+ + K+ FG
Sbjct: 166 CLVGQGLVVKIGDFG 180
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 71 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 124
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 71 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 124
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 34.3 bits (77), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 71 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 124
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 34.3 bits (77), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 9 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 68
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 69 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 122
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 70 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 123
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.3 bits (77), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKF 69
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 70 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 123
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.3 bits (77), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 70 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 123
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 34.3 bits (77), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L E+ ++S H NI+ L GY D R L+ E+ G++ L +K D E+
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPLGTVYREL-QKLSRFD-EQ 112
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A + + AN + +SK I H +I +N+LL K+A FG + + S+RR
Sbjct: 113 RTATYI-TELANALSYCHSKRVI-HRDIKPENLLLGSNGELKIADFGWSVHAP--SSRRT 168
Query: 221 C 221
Sbjct: 169 T 169
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 34.3 bits (77), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 12/78 (15%)
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD--ELCNAKLAGFG-AANYCSGGSN 217
RL AL+ N+ V HGN+T++NI +D + LAG+G A YC G +
Sbjct: 167 RLLDALEFLHENEYV---------HGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKH 217
Query: 218 RRNCEKTSEMAEDINDFV 235
E + E +F+
Sbjct: 218 VAYVEGSRSPHEGDLEFI 235
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 60/154 (38%), Gaps = 12/154 (7%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL--EEEILLKSSSHLNIVTLLG 124
+FG +E A R + V +K + L E +IL+ HLN+V LLG
Sbjct: 39 AFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98
Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLA---------IALQIDSANQMV 175
++ EF + G+L LR K K L I A M
Sbjct: 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGME 158
Query: 176 CMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
+ S+ I H ++ + NILL E K+ FG A
Sbjct: 159 FLASRKXI-HRDLAARNILLSEKNVVKIXDFGLA 191
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 34.3 bits (77), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLL 123
FGD +G+ + + A++ VA+K + S + L+E + ++ H +IV L+
Sbjct: 23 FGDVHQGIYMSPENPAMA-----VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
G + ++ E G LR L+ + LD + A Q+ +A + + SK
Sbjct: 78 GVITEN--PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA--LAYLESKR-F 132
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANY 211
H +I + N+L+ KL FG + Y
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRY 160
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 34.3 bits (77), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKF 70
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 71 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 124
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
I H ++ +N+LLDE N K+A FG +N + G N KTS
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG----NFLKTS 162
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 70 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 123
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARRY--MASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VAVK+ + M+ L E L+K H +V L Y + ++ E+M+ GSL
Sbjct: 34 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLV 91
Query: 147 WNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ G L K L +A QI A M + + I H N+ + NIL+ + + K+A
Sbjct: 92 DFLKTPSGIKLTINKLLDMAAQI--AEGMAFIEERNYI-HRNLRAANILVSDTLSCKIAD 148
Query: 206 FGAA 209
FG A
Sbjct: 149 FGLA 152
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.3 bits (77), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 70 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 123
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 91 VAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWN 148
VA+K R M+ + +EE ++ SH +V L G + CLV EFM+ G L
Sbjct: 35 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI-CLVTEFMEHGCLSDY 93
Query: 149 LREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA 208
LR + G E L + L + + + + + H ++ + N L+ E K++ FG
Sbjct: 94 LRTQRGLFAAETLLGMCLDV---CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM 150
Query: 209 ANY 211
+
Sbjct: 151 TRF 153
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
I H ++ +N+LLDE N K+A FG +N + G N KTS
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG----NFLKTS 166
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 13/142 (9%)
Query: 91 VAVKARRYMASQTKLEEEIL-----LKSSSHLNIVTLLG----YPQDGLQRRCLVFEFMQ 141
VAVK + S + EE L +K SH N++ LLG G+ + ++ FM+
Sbjct: 65 VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMK 124
Query: 142 RGSLRWNL---REKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL 198
G L L R + GP + + +D A M + S H ++ + N +L +
Sbjct: 125 YGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL-SNRNFLHRDLAARNCMLRDD 183
Query: 199 CNAKLAGFGAANYCSGGSNRRN 220
+A FG + G R
Sbjct: 184 MTVCVADFGLSKKIYSGDYYRQ 205
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
I H ++ +N+LLDE N K+A FG +N + G N KTS
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG----NFLKTS 172
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
I H ++ +N+LLDE N K+A FG +N + G N KTS
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG----NFLKTS 171
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSS-SHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + + +H N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKF 70
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 71 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 124
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 76 TLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEILLKSSSHLNIVTLLGYPQDGLQ 131
T+ KG ++ NL VA+K R + T + E LLK H NIVTL D +
Sbjct: 17 TVYKGKSKLTDNL--VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTL----HDIIH 70
Query: 132 RR---CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNI 188
LVFE++ + L+ L + G ++ Q+ C K + H ++
Sbjct: 71 TEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQL-LRGLAYCHRQK--VLHRDL 126
Query: 189 TSDNILLDELCNAKLAGFGAA 209
N+L++E KLA FG A
Sbjct: 127 KPQNLLINERGELKLADFGLA 147
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILL-KSSSHLNIVTL 122
++++ G+ G + +R + V V +R + +++EI + K +H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKP 181
G+ ++G + L E+ G L + G P +R L V
Sbjct: 70 YGHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-----VVYLHGI 123
Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
I H +I +N+LLDE N K++ FG A
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 61/157 (38%), Gaps = 15/157 (9%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL--EEEILLKSSSHLNIVTLLG 124
+FG +E A R + V +K + L E +IL+ HLN+V LLG
Sbjct: 40 AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 99
Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREKGG-------PLDWEKRL-----AIALQIDSAN 172
++ EF + G+L LR K P D K I A
Sbjct: 100 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAK 159
Query: 173 QMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
M + S+ I H ++ + NILL E K+ FG A
Sbjct: 160 GMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGLA 195
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 19/216 (8%)
Query: 2 IALATPTDKEEGWSASFYIASPVNRGEQNYGCQFVITIVGSAAVARSVSIALVTLAILKR 61
+ TP ++EE +A +A + + E+ + + GS + V+LA K
Sbjct: 91 FHVETPEEREEWTTAIQTVADGLKKQEE----EEMDFRSGSPSDNSGAEEMEVSLAKPKH 146
Query: 62 R------RMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEILLK 112
R LK G G ++ ++A R + +K +A L E +L+
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 206
Query: 113 SSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNL-REKGGPLDWEKRLAIALQIDSA 171
+S H +T L Y R C V E+ G L ++L RE+ D + +I SA
Sbjct: 207 NSRH-PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED--RARFYGAEIVSA 263
Query: 172 NQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
+ ++S+ + + ++ +N++LD+ + K+ FG
Sbjct: 264 --LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFG 297
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLL 123
FGD +G+ + + A++ VA+K + S + L+E + ++ H +IV L+
Sbjct: 403 FGDVHQGIYMSPENPAMA-----VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
G + ++ E G LR L+ + LD + A Q+ +A + + SK +
Sbjct: 458 GVITEN--PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA--LAYLESKRFV 513
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANY 211
H +I + N+L+ KL FG + Y
Sbjct: 514 -HRDIAARNVLVSATDCVKLGDFGLSRY 540
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 16/158 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL--EEEILLKSSSHLNIVTLLG 124
+FG +E A R + V +K + L E +IL+ HLN+V LLG
Sbjct: 39 AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98
Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREKG--------GPLDWEKRL-----AIALQIDSA 171
++ EF + G+L LR K P D K I A
Sbjct: 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVA 158
Query: 172 NQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
M + S+ I H ++ + NILL E K+ FG A
Sbjct: 159 KGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGLA 195
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 16/158 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL--EEEILLKSSSHLNIVTLLG 124
+FG +E A R + V +K + L E +IL+ HLN+V LLG
Sbjct: 39 AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98
Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREKG--------GPLDWEKRL-----AIALQIDSA 171
++ EF + G+L LR K P D K I A
Sbjct: 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVA 158
Query: 172 NQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
M + S+ I H ++ + NILL E K+ FG A
Sbjct: 159 KGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGLA 195
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 16/158 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL--EEEILLKSSSHLNIVTLLG 124
+FG +E A R + V +K + L E +IL+ HLN+V LLG
Sbjct: 41 AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 100
Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLRE--------KGGPLDWEKRL-----AIALQIDSA 171
++ EF + G+L LR K P D K I A
Sbjct: 101 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVA 160
Query: 172 NQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
M + S+ I H ++ + NILL E K+ FG A
Sbjct: 161 KGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGLA 197
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 16/158 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL--EEEILLKSSSHLNIVTLLG 124
+FG +E A R + V +K + L E +IL+ HLN+V LLG
Sbjct: 39 AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98
Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREKG--------GPLDWEKRL-----AIALQIDSA 171
++ EF + G+L LR K P D K I A
Sbjct: 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVA 158
Query: 172 NQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
M + S+ I H ++ + NILL E K+ FG A
Sbjct: 159 KGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGLA 195
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLL 123
FGD +G+ + + A++ VA+K + S + L+E + ++ H +IV L+
Sbjct: 23 FGDVHQGIYMSPENPAMA-----VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
G + ++ E G LR L+ + LD + A Q+ +A + + SK
Sbjct: 78 GVITEN--PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA--LAYLESKR-F 132
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANY 211
H +I + N+L+ KL FG + Y
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRY 160
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 103 TKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRL 162
T E+ IL + +H + L Q R V EF+ G L +++ +K D +
Sbjct: 70 TMTEKRILSLARNHPFLTQLFCCFQTP-DRLFFVMEFVNGGDLMFHI-QKSRRFDEARAR 127
Query: 163 AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG--AANYCSGGSNRRN 220
A +I SA ++ ++ K IY ++ DN+LLD + KLA FG C+G +
Sbjct: 128 FYAAEIISA--LMFLHDKGIIYR-DLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATF 184
Query: 221 CEKTSEMAEDI 231
C +A +I
Sbjct: 185 CGTPDYIAPEI 195
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 16/158 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL--EEEILLKSSSHLNIVTLLG 124
+FG +E A R + V +K + L E +IL+ HLN+V LLG
Sbjct: 76 AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 135
Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREKG--------GPLDWEKRL-----AIALQIDSA 171
++ EF + G+L LR K P D K I A
Sbjct: 136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVA 195
Query: 172 NQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
M + S+ I H ++ + NILL E K+ FG A
Sbjct: 196 KGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGLA 232
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLL 123
FGD +G+ + + A++ VA+K + S + L+E + ++ H +IV L+
Sbjct: 23 FGDVHQGIYMSPENPAMA-----VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
G + ++ E G LR L+ + LD + A Q+ +A + + SK +
Sbjct: 78 GVITEN--PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLESKRFV 133
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANY 211
H +I + N+L+ KL FG + Y
Sbjct: 134 -HRDIAARNVLVSSNDCVKLGDFGLSRY 160
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 57 AILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEILL 111
++++ + L+ G+ G+ +A +VA+K R A T + E LL
Sbjct: 18 GLMEKYQKLEKVGEGTYGVVY----KAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLL 73
Query: 112 KSSSHLNIVTLLGYPQDGLQRRC--LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQID 169
K H NIV+L+ RC LVFEFM++ + K G D + ++ + +
Sbjct: 74 KELHHPNIVSLIDVIH---SERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLR 130
Query: 170 SANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
C + I H ++ N+L++ KLA FG A
Sbjct: 131 GVAH--CHQHR--ILHRDLKPQNLLINSDGALKLADFGLA 166
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLL 123
FGD +G+ + + A++ VA+K + S + L+E + ++ H +IV L+
Sbjct: 26 FGDVHQGIYMSPENPALA-----VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
G + ++ E G LR L+ + LD + A Q+ +A + + SK
Sbjct: 81 GVITEN--PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLESKR-F 135
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANY 211
H +I + N+L+ KL FG + Y
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLSRY 163
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 16/158 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL--EEEILLKSSSHLNIVTLLG 124
+FG +E A R + V +K + L E +IL+ HLN+V LLG
Sbjct: 30 AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 89
Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREKG--------GPLDWEKRL-----AIALQIDSA 171
++ EF + G+L LR K P D K I A
Sbjct: 90 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVA 149
Query: 172 NQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
M + S+ I H ++ + NILL E K+ FG A
Sbjct: 150 KGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGLA 186
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 105 LEEEILLKSSSHLNIVTLLG--YPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRL 162
L E +L++ +H N++ L+G P +GL ++ +M G L +R + +
Sbjct: 70 LREGLLMRGLNHPNVLALIGIMLPPEGLPH--VLLPYMCHGDLLQFIRSPQRNPTVKDLI 127
Query: 163 AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
+ LQ+ + + ++ H ++ + N +LDE K+A FG A
Sbjct: 128 SFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLA 171
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLL 123
FGD +G+ + + A++ VA+K + S + L+E + ++ H +IV L+
Sbjct: 20 FGDVHQGIYMSPENPALA-----VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
G + ++ E G LR L+ + LD + A Q+ +A + + SK
Sbjct: 75 GVITEN--PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLESKR-F 129
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANY 211
H +I + N+L+ KL FG + Y
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRY 157
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLL 123
FGD +G+ + + A++ VA+K + S + L+E + ++ H +IV L+
Sbjct: 23 FGDVHQGIYMSPENPALA-----VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
G + ++ E G LR L+ + LD + A Q+ +A + + SK +
Sbjct: 78 GVITEN--PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLESKRFV 133
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANY 211
H +I + N+L+ KL FG + Y
Sbjct: 134 -HRDIAARNVLVSSNDCVKLGDFGLSRY 160
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLL 123
FGD +G+ + + A++ VA+K + S + L+E + ++ H +IV L+
Sbjct: 25 FGDVHQGIYMSPENPALA-----VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
G + ++ E G LR L+ + LD + A Q+ +A + + SK
Sbjct: 80 GVITEN--PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLESKR-F 134
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANY 211
H +I + N+L+ KL FG + Y
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLSRY 162
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 57 AILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEILL 111
++++ + L+ G+ G+ +A +VA+K R A T + E LL
Sbjct: 18 GLMEKYQKLEKVGEGTYGVVY----KAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLL 73
Query: 112 KSSSHLNIVTLLGYPQDGLQRRC--LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQID 169
K H NIV+L+ RC LVFEFM++ + K G D + ++ + +
Sbjct: 74 KELHHPNIVSLIDVIH---SERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLR 130
Query: 170 SANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
C + I H ++ N+L++ KLA FG A
Sbjct: 131 GVAH--CHQHR--ILHRDLKPQNLLINSDGALKLADFGLA 166
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLL 123
FGD +G+ + + A++ VA+K + S + L+E + ++ H +IV L+
Sbjct: 51 FGDVHQGIYMSPENPALA-----VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
G + ++ E G LR L+ + LD + A Q+ +A + + SK +
Sbjct: 106 GVITEN--PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLESKRFV 161
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANY 211
H +I + N+L+ KL FG + Y
Sbjct: 162 -HRDIAARNVLVSSNDCVKLGDFGLSRY 188
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLL 123
FGD +G+ + + A++ VA+K + S + L+E + ++ H +IV L+
Sbjct: 28 FGDVHQGIYMSPENPALA-----VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
G + ++ E G LR L+ + LD + A Q+ +A + + SK
Sbjct: 83 GVITEN--PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLESKR-F 137
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANY 211
H +I + N+L+ KL FG + Y
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRY 165
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 16/158 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL--EEEILLKSSSHLNIVTLLG 124
+FG +E A R + V +K + L E +IL+ HLN+V LLG
Sbjct: 30 AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 89
Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREKG--------GPLDWEKRL-----AIALQIDSA 171
++ EF + G+L LR K P D K I A
Sbjct: 90 ACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVA 149
Query: 172 NQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
M + S+ I H ++ + NILL E K+ FG A
Sbjct: 150 KGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGLA 186
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 60/147 (40%), Gaps = 31/147 (21%)
Query: 88 LTVVAVKARRYMAS---QTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRG 143
T+VAVK + AS Q + E L+ + NIV LLG G + CL+FE+M G
Sbjct: 77 FTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG-KPMCLLFEYMAYG 135
Query: 144 SLRWNLREKG-----------------------GPLDWEKRLAIALQIDSANQMVCMYSK 180
L LR PL ++L IA Q+ + + S+
Sbjct: 136 DLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAG---MAYLSE 192
Query: 181 PPIYHGNITSDNILLDELCNAKLAGFG 207
H ++ + N L+ E K+A FG
Sbjct: 193 RKFVHRDLATRNCLVGENMVVKIADFG 219
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 16/158 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL--EEEILLKSSSHLNIVTLLG 124
+FG +E A R + V +K + L E +IL+ HLN+V LLG
Sbjct: 30 AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 89
Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREKG--------GPLDWEKRL-----AIALQIDSA 171
++ EF + G+L LR K P D K I A
Sbjct: 90 ACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVA 149
Query: 172 NQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
M + S+ I H ++ + NILL E K+ FG A
Sbjct: 150 KGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGLA 186
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 16/158 (10%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL--EEEILLKSSSHLNIVTLLG 124
+FG +E A R + V +K + L E +IL+ HLN+V LLG
Sbjct: 30 AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 89
Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREKG--------GPLDWEKRL-----AIALQIDSA 171
++ EF + G+L LR K P D K I A
Sbjct: 90 ACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVA 149
Query: 172 NQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
M + S+ I H ++ + NILL E K+ FG A
Sbjct: 150 KGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGLA 186
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLL 123
FGD +G+ + + A++ VA+K + S + L+E + ++ H +IV L+
Sbjct: 403 FGDVHQGIYMSPENPAMA-----VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
G + ++ E G LR L+ + LD + A Q+ +A + + SK +
Sbjct: 458 GVITEN--PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA--LAYLESKRFV 513
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANY 211
H +I + N+L+ KL FG + Y
Sbjct: 514 -HRDIAARNVLVSSNDCVKLGDFGLSRY 540
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 20/147 (13%)
Query: 81 DRAVSRNLTVVAVKARRYMASQTKL-----EEEILLKSSSHLNIVTLLGY-PQDGLQRRC 134
D+ + VAVK + A++ L E E++ H NI+ LLG QDG
Sbjct: 52 DKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLY 109
Query: 135 LVFEFMQRGSLRWNLREKGGP---LDWEKRLAIALQIDSANQMVCMY---------SKPP 182
++ E+ +G+LR LR + P ++ Q+ + + C Y +
Sbjct: 110 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 169
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAA 209
H ++ + N+L+ E K+A FG A
Sbjct: 170 CIHRDLAARNVLVTENNVMKIADFGLA 196
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 20/147 (13%)
Query: 81 DRAVSRNLTVVAVKARRYMASQTKL-----EEEILLKSSSHLNIVTLLGY-PQDGLQRRC 134
D+ + VAVK + A++ L E E++ H NI+ LLG QDG
Sbjct: 49 DKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLY 106
Query: 135 LVFEFMQRGSLRWNLREKGGP---LDWEKRLAIALQIDSANQMVCMY---------SKPP 182
++ E+ +G+LR LR + P ++ Q+ + + C Y +
Sbjct: 107 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 166
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAA 209
H ++ + N+L+ E K+A FG A
Sbjct: 167 CIHRDLAARNVLVTENNVMKIADFGLA 193
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARRY--MASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VAVK+ + M+ L E L+K H +V L Y + ++ E+M+ GSL
Sbjct: 33 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLV 90
Query: 147 WNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ G L K L +A QI A M + + I H ++ + NIL+ + + K+A
Sbjct: 91 DFLKTPSGIKLTINKLLDMAAQI--AEGMAFIEERNYI-HRDLRAANILVSDTLSCKIAD 147
Query: 206 FGAA 209
FG A
Sbjct: 148 FGLA 151
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGS 216
I H ++ +N+LLD+ N K+A FG +N + G+
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 20/147 (13%)
Query: 81 DRAVSRNLTVVAVKARRYMASQTKL-----EEEILLKSSSHLNIVTLLGY-PQDGLQRRC 134
D+ + VAVK + A++ L E E++ H NI+ LLG QDG
Sbjct: 106 DKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLY 163
Query: 135 LVFEFMQRGSLRWNLREKGGP---LDWEKRLAIALQIDSANQMVCMY---------SKPP 182
++ E+ +G+LR LR + P ++ Q+ + + C Y +
Sbjct: 164 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 223
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAA 209
H ++ + N+L+ E K+A FG A
Sbjct: 224 CIHRDLAARNVLVTENNVMKIADFGLA 250
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL 194
++ E++ GS LR GP D E ++A L+ + + ++S+ I H +I + N+L
Sbjct: 98 IIMEYLGGGSALDLLR--AGPFD-EFQIATMLK-EILKGLDYLHSEKKI-HRDIKAANVL 152
Query: 195 LDELCNAKLAGFGAANYCSGGSNRRNC 221
L E + KLA FG A + +RN
Sbjct: 153 LSEQGDVKLADFGVAGQLTDTQIKRNT 179
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 100 ASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDW 158
+S KL E+ ++K +H NIV L + + LV E+ G + L G +
Sbjct: 48 SSLQKLFREVRIMKVLNHPNIVKLFEVIETE-KTLYLVMEYASGGEVFDYLVAHGWMKEK 106
Query: 159 EKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS 216
E R A QI SA Q C + I H ++ ++N+LLD N K+A FG +N + G+
Sbjct: 107 EAR-AKFRQIVSAVQ-YC--HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN 160
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 62 RRMLKSF---GDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLN 118
R +L S+ G+ G+ + ++ R + V + R+ + E ++++ H N
Sbjct: 44 RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103
Query: 119 IVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMY 178
+V + G + ++ EF+Q G+L + + L+ E+ IA ++ Q +
Sbjct: 104 VVEMYKSYLVG-EELWVLMEFLQGGALTDIVSQVR--LNEEQ---IATVCEAVLQALAYL 157
Query: 179 SKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
+ H +I SD+ILL KL+ FG S +R
Sbjct: 158 HAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 199
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 20/147 (13%)
Query: 81 DRAVSRNLTVVAVKARRYMASQTKL-----EEEILLKSSSHLNIVTLLGY-PQDGLQRRC 134
D+ + VAVK + A++ L E E++ H NI+ LLG QDG
Sbjct: 60 DKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLY 117
Query: 135 LVFEFMQRGSLRWNLREKGGP---LDWEKRLAIALQIDSANQMVCMY---------SKPP 182
++ E+ +G+LR LR + P ++ Q+ + + C Y +
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAA 209
H ++ + N+L+ E K+A FG A
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 20/147 (13%)
Query: 81 DRAVSRNLTVVAVKARRYMASQTKL-----EEEILLKSSSHLNIVTLLGY-PQDGLQRRC 134
D+ + VAVK + A++ L E E++ H NI+ LLG QDG
Sbjct: 60 DKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLY 117
Query: 135 LVFEFMQRGSLRWNLREKGGP---LDWEKRLAIALQIDSANQMVCMY---------SKPP 182
++ E+ +G+LR LR + P ++ Q+ + + C Y +
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAA 209
H ++ + N+L+ E K+A FG A
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 20/147 (13%)
Query: 81 DRAVSRNLTVVAVKARRYMASQTKL-----EEEILLKSSSHLNIVTLLGY-PQDGLQRRC 134
D+ + VAVK + A++ L E E++ H NI+ LLG QDG
Sbjct: 60 DKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLY 117
Query: 135 LVFEFMQRGSLRWNLREKGGP---LDWEKRLAIALQIDSANQMVCMY---------SKPP 182
++ E+ +G+LR LR + P ++ Q+ + + C Y +
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAA 209
H ++ + N+L+ E K+A FG A
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 26/172 (15%)
Query: 61 RRRMLKSFGDSVEG----LTLIKGDRAVSRNLTVVAVKARRY---MASQTKLEEEI-LLK 112
+R LK D EG ++L D +VAVKA + ++ ++EI +L+
Sbjct: 12 HKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILR 71
Query: 113 SSSHLNIVTLLGYPQD-GLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIAL-QIDS 170
+ H +I+ G +D G + LV E++ GSLR D+ R +I L Q+
Sbjct: 72 TLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLR----------DYLPRHSIGLAQLLL 121
Query: 171 ANQMVC-----MYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN 217
Q +C ++S+ I H N+ + N+LLD K+ FG A G
Sbjct: 122 FAQQICEGMAYLHSQHYI-HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 172
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 100 ASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDW 158
+S KL E+ ++K +H NIV L + + LV E+ G + L G +
Sbjct: 55 SSLQKLFREVRIMKVLNHPNIVKLFEVIETE-KTLYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 159 EKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS 216
E R A QI SA Q C + I H ++ ++N+LLD N K+A FG +N + G+
Sbjct: 114 EAR-AKFRQIVSAVQY-C--HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN 167
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 100 ASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDW 158
+S KL E+ ++K +H NIV L + + LV E+ G + L G +
Sbjct: 55 SSLQKLFREVRIMKVLNHPNIVKLFEVIETE-KTLYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 159 EKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS 216
E R A QI SA Q C + I H ++ ++N+LLD N K+A FG +N + G+
Sbjct: 114 EAR-AKFRQIVSAVQY-C--HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN 167
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 20/147 (13%)
Query: 81 DRAVSRNLTVVAVKARRYMASQTKL-----EEEILLKSSSHLNIVTLLGY-PQDGLQRRC 134
D+ + VAVK + A++ L E E++ H NI+ LLG QDG
Sbjct: 60 DKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLY 117
Query: 135 LVFEFMQRGSLRWNLREKGGP---LDWEKRLAIALQIDSANQMVCMY---------SKPP 182
++ E+ +G+LR LR + P ++ Q+ + + C Y +
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAA 209
H ++ + N+L+ E K+A FG A
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 100 ASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDW 158
+S KL E+ ++K +H NIV L + + LV E+ G + L G +
Sbjct: 55 SSLQKLFREVRIMKVLNHPNIVKLFEVIETE-KTLYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 159 EKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS 216
E R A QI SA Q C + I H ++ ++N+LLD N K+A FG +N + G+
Sbjct: 114 EAR-AKFRQIVSAVQY-C--HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN 167
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 100 ASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDW 158
+S KL E+ ++K +H NIV L + + LV E+ G + L G +
Sbjct: 55 SSLQKLFREVRIMKVLNHPNIVKLFEVIETE-KTLYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 159 EKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS 216
E R A QI SA Q C + I H ++ ++N+LLD N K+A FG +N + G+
Sbjct: 114 EAR-AKFRQIVSAVQY-C--HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN 167
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 68/172 (39%), Gaps = 22/172 (12%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSS--SHLNIVTLLG 124
+FG VE G + V +K+ + + L E+ + S H NIV LLG
Sbjct: 58 AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 117
Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIA---------LQIDS--ANQ 173
G ++ E+ G L LR K L+ + AIA L S A
Sbjct: 118 ACTHG-GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQG 176
Query: 174 MVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA-------NYCSGGSNR 218
M + SK I H ++ + N+LL AK+ FG A NY G+ R
Sbjct: 177 MAFLASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 100 ASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDW 158
+S KL E+ ++K +H NIV L + + LV E+ G + L G +
Sbjct: 55 SSLQKLFREVRIMKVLNHPNIVKLFEVIETE-KTLYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 159 EKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS 216
E R A QI SA Q C + I H ++ ++N+LLD N K+A FG +N + G+
Sbjct: 114 EAR-AKFRQIVSAVQY-C--HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN 167
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 68/172 (39%), Gaps = 22/172 (12%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSS--SHLNIVTLLG 124
+FG VE G + V +K+ + + L E+ + S H NIV LLG
Sbjct: 58 AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 117
Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIA---------LQIDS--ANQ 173
G ++ E+ G L LR K L+ + AIA L S A
Sbjct: 118 ACTHG-GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQG 176
Query: 174 MVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA-------NYCSGGSNR 218
M + SK I H ++ + N+LL AK+ FG A NY G+ R
Sbjct: 177 MAFLASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL 194
++ E++ GS +L E G PLD E ++A L+ + + ++S+ I H +I + N+L
Sbjct: 102 IIMEYLGGGS-ALDLLEPG-PLD-ETQIATILR-EILKGLDYLHSEKKI-HRDIKAANVL 156
Query: 195 LDELCNAKLAGFGAANYCSGGSNRRNC 221
L E KLA FG A + +RN
Sbjct: 157 LSEHGEVKLADFGVAGQLTDTQIKRNT 183
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 45 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIIIEFMTYGNLLD 103
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE ++ L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 104 YLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 160
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 161 GLSRLMTGDT 170
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARRY--MASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VAVK+ + M+ L E L+K H +V L Y + ++ E+M+ GSL
Sbjct: 38 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLV 95
Query: 147 WNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ G L K L +A QI A M + + I H ++ + NIL+ + + K+A
Sbjct: 96 DFLKTPSGIKLTINKLLDMAAQI--AEGMAFIEERNYI-HRDLRAANILVSDTLSCKIAD 152
Query: 206 FGAA 209
FG A
Sbjct: 153 FGLA 156
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 41 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIIIEFMTYGNLLD 99
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE ++ L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 100 YLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 156
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 157 GLSRLMTGDT 166
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 20/147 (13%)
Query: 81 DRAVSRNLTVVAVKARRYMASQTKL-----EEEILLKSSSHLNIVTLLGY-PQDGLQRRC 134
D+ + VAVK + A++ L E E++ H NI+ LLG QDG
Sbjct: 60 DKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDG--PLY 117
Query: 135 LVFEFMQRGSLRWNLREKGGP---LDWEKRLAIALQIDSANQMVCMY---------SKPP 182
++ E+ +G+LR LR + P ++ Q+ + + C Y +
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAA 209
H ++ + N+L+ E K+A FG A
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARRY--MASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VAVK+ + M+ L E L+K H +V L Y + ++ E+M+ GSL
Sbjct: 38 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLV 95
Query: 147 WNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ G L K L +A QI A M + + I H ++ + NIL+ + + K+A
Sbjct: 96 DFLKTPSGIKLTINKLLDMAAQI--AEGMAFIEERNYI-HRDLRAANILVSDTLSCKIAD 152
Query: 206 FGAA 209
FG A
Sbjct: 153 FGLA 156
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARRY--MASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VAVK+ + M+ L E L+K H +V L Y + ++ E+M+ GSL
Sbjct: 39 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLV 96
Query: 147 WNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ G L K L +A QI A M + + I H ++ + NIL+ + + K+A
Sbjct: 97 DFLKTPSGIKLTINKLLDMAAQI--AEGMAFIEERNYI-HRDLRAANILVSDTLSCKIAD 153
Query: 206 FGAA 209
FG A
Sbjct: 154 FGLA 157
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL 194
++ E++ GS +L E G PLD E ++A L+ + + ++S+ I H +I + N+L
Sbjct: 82 IIMEYLGGGS-ALDLLEPG-PLD-ETQIATILR-EILKGLDYLHSEKKI-HRDIKAANVL 136
Query: 195 LDELCNAKLAGFGAANYCSGGSNRRNC 221
L E KLA FG A + +RN
Sbjct: 137 LSEHGEVKLADFGVAGQLTDTQIKRNT 163
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARRY--MASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VAVK+ + M+ L E L+K H +V L Y + ++ E+M+ GSL
Sbjct: 40 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLV 97
Query: 147 WNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ G L K L +A QI A M + + I H ++ + NIL+ + + K+A
Sbjct: 98 DFLKTPSGIKLTINKLLDMAAQI--AEGMAFIEERNYI-HRDLRAANILVSDTLSCKIAD 154
Query: 206 FGAA 209
FG A
Sbjct: 155 FGLA 158
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARRY--MASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VAVK+ + M+ L E L+K H +V L Y + ++ E+M+ GSL
Sbjct: 43 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLV 100
Query: 147 WNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ G L K L +A QI A M + + I H ++ + NIL+ + + K+A
Sbjct: 101 DFLKTPSGIKLTINKLLDMAAQI--AEGMAFIEERNYI-HRDLRAANILVSDTLSCKIAD 157
Query: 206 FGAA 209
FG A
Sbjct: 158 FGLA 161
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARRY--MASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VAVK+ + M+ L E L+K H +V L Y + ++ E+M+ GSL
Sbjct: 44 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLV 101
Query: 147 WNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ G L K L +A QI A M + + I H ++ + NIL+ + + K+A
Sbjct: 102 DFLKTPSGIKLTINKLLDMAAQI--AEGMAFIEERNYI-HRDLRAANILVSDTLSCKIAD 158
Query: 206 FGAA 209
FG A
Sbjct: 159 FGLA 162
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 116 HLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMV 175
H +I+ L Y +D LV E G + L+ + P + QI + M+
Sbjct: 70 HPSILELYNYFEDS-NYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITG--ML 126
Query: 176 CMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
++S I H ++T N+LL N K+A FG A
Sbjct: 127 YLHSHG-ILHRDLTLSNLLLTRNMNIKIADFGLA 159
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRR---CLVFEFMQRGS 144
VAVK + M + L+E ++K H N+V LLG R ++ EFM G+
Sbjct: 286 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV----CTREPPFYIITEFMTYGN 341
Query: 145 LRWNLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL 203
L LRE ++ L +A QI SA + + K H N+ + N L+ E K+
Sbjct: 342 LLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRNLAARNCLVGENHLVKV 398
Query: 204 AGFGAANYCSGGS 216
A FG + +G +
Sbjct: 399 ADFGLSRLMTGDT 411
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRR---CLVFEFMQRGS 144
VAVK + M + L+E ++K H N+V LLG R ++ EFM G+
Sbjct: 244 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV----CTREPPFYIITEFMTYGN 299
Query: 145 LRWNLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL 203
L LRE ++ L +A QI SA + + K H N+ + N L+ E K+
Sbjct: 300 LLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRNLAARNCLVGENHLVKV 356
Query: 204 AGFGAANYCSGGS 216
A FG + +G +
Sbjct: 357 ADFGLSRLMTGDT 369
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARRY--MASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VAVK+ + M+ L E L+K H +V L Y + ++ E+M+ GSL
Sbjct: 38 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLV 95
Query: 147 WNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ G L K L +A QI A M + + I H ++ + NIL+ + + K+A
Sbjct: 96 DFLKTPSGIKLTINKLLDMAAQI--AEGMAFIEERNYI-HRDLRAANILVSDTLSCKIAD 152
Query: 206 FGAA 209
FG A
Sbjct: 153 FGLA 156
>pdb|3UOE|A Chain A, The Crystal Structure Of Dehydrogenase From Sinorhizobium
Meliloti
pdb|3UOE|B Chain B, The Crystal Structure Of Dehydrogenase From Sinorhizobium
Meliloti
Length = 357
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Query: 86 RNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSL 145
RNL+V ++ R A +L+ +LL++ L G P GLQR L+ + +G
Sbjct: 32 RNLSVALLEKRGVPADSARLQANLLLEAE-------LRGLPSHGLQRLPLLLSRLDKGLA 84
Query: 146 RWNLREKG 153
R G
Sbjct: 85 NPTTRGNG 92
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 91 VAVKA-----RRYMASQTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRC--LVFEFMQR 142
VA+KA R + + E E+ S SH NIV+++ + + C LV E+++
Sbjct: 39 VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE---EDDCYYLVMEYIEG 95
Query: 143 GSLRWNLREKGGPLDWEKRLAIALQI-DSANQMVCMYSKPPIYHGNITSDNILLDELCNA 201
+L + E GPL + + QI D M I H +I NIL+D
Sbjct: 96 PTLSEYI-ESHGPLSVDTAINFTNQILDGIKHAHDMR----IVHRDIKPQNILIDSNKTL 150
Query: 202 KLAGFGAANYCSGGS 216
K+ FG A S S
Sbjct: 151 KIFDFGIAKALSETS 165
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARRY--MASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VAVK+ + M+ L E L+K H +V L Y + ++ E+M+ GSL
Sbjct: 38 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLV 95
Query: 147 WNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ G L K L +A QI A M + + I H ++ + NIL+ + + K+A
Sbjct: 96 DFLKTPSGIKLTINKLLDMAAQI--AEGMAFIEERNYI-HRDLRAANILVSDTLSCKIAD 152
Query: 206 FGAA 209
FG A
Sbjct: 153 FGLA 156
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL 194
++ E++ GS +L E G PLD E ++A L+ + + ++S+ I H +I + N+L
Sbjct: 82 IIMEYLGGGS-ALDLLEPG-PLD-ETQIATILR-EILKGLDYLHSEKKI-HRDIKAANVL 136
Query: 195 LDELCNAKLAGFGAANYCSGGSNRRN 220
L E KLA FG A + +RN
Sbjct: 137 LSEHGEVKLADFGVAGQLTDTQIKRN 162
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARRY--MASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VAVK+ + M+ L E L+K H +V L Y + ++ E+M+ GSL
Sbjct: 47 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLV 104
Query: 147 WNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ G L K L +A QI A M + + I H ++ + NIL+ + + K+A
Sbjct: 105 DFLKTPSGIKLTINKLLDMAAQI--AEGMAFIEERNYI-HRDLRAANILVSDTLSCKIAD 161
Query: 206 FGAA 209
FG A
Sbjct: 162 FGLA 165
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARRY--MASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VAVK+ + M+ L E L+K H +V L Y + ++ E+M+ GSL
Sbjct: 44 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLV 101
Query: 147 WNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ G L K L +A QI A M + + I H ++ + NIL+ + + K+A
Sbjct: 102 DFLKTPSGIKLTINKLLDMAAQI--AEGMAFIEERNYI-HRDLRAANILVSDTLSCKIAD 158
Query: 206 FGAA 209
FG A
Sbjct: 159 FGLA 162
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARRY--MASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VAVK+ + M+ L E L+K H +V L Y + ++ E+M+ GSL
Sbjct: 46 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLV 103
Query: 147 WNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ G L K L +A QI A M + + I H ++ + NIL+ + + K+A
Sbjct: 104 DFLKTPSGIKLTINKLLDMAAQI--AEGMAFIEERNYI-HRDLRAANILVSDTLSCKIAD 160
Query: 206 FGAA 209
FG A
Sbjct: 161 FGLA 164
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 135 LVFEFMQRGSLRWNLREKGGPLDWEKRLA--IALQIDSANQMVCMYSKPPIYHGNITSDN 192
+V E+M G L + P W K + L +D+ + M + H ++ DN
Sbjct: 152 MVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLI-------HRDVKPDN 204
Query: 193 ILLDELCNAKLAGFGA 208
+LLD+ + KLA FG
Sbjct: 205 MLLDKHGHLKLADFGT 220
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARRY--MASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VAVK+ + M+ L E L+K H +V L Y + ++ E+M+ GSL
Sbjct: 48 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLV 105
Query: 147 WNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ G L K L +A QI A M + + I H ++ + NIL+ + + K+A
Sbjct: 106 DFLKTPSGIKLTINKLLDMAAQI--AEGMAFIEERNYI-HRDLRAANILVSDTLSCKIAD 162
Query: 206 FGAA 209
FG A
Sbjct: 163 FGLA 166
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 31.6 bits (70), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 40 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIIIEFMTYGNLLD 98
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE + L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 99 YLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 155
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 156 GLSRLMTGDT 165
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 31.6 bits (70), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Query: 100 ASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDW 158
S KL E+ ++K +H NIV L + + L+ E+ G + L G +
Sbjct: 56 TSLQKLFREVRIMKILNHPNIVKLFEVIETE-KTLYLIMEYASGGEVFDYLVAHGRMKEK 114
Query: 159 EKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN-YCSGG 215
E R QI SA Q C + I H ++ ++N+LLD N K+A FG +N + GG
Sbjct: 115 EARSKFR-QIVSAVQY-CHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEILLKSSSHLNIVT 121
LK G G ++ ++A R + +K +A L E +L++S H +T
Sbjct: 14 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH-PFLT 72
Query: 122 LLGYPQDGLQRRCLVFEFMQRGSLRWNL-REKGGPLDWEKRLAIALQIDSANQMVCMYSK 180
L Y R C V E+ G L ++L RE+ D + +I SA + ++S+
Sbjct: 73 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED--RARFYGAEIVSA--LDYLHSE 128
Query: 181 PPIYHGNITSDNILLDELCNAKLAGFG 207
+ + ++ +N++LD+ + K+ FG
Sbjct: 129 KNVVYRDLKLENLMLDKDGHIKITDFG 155
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 40 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIIIEFMTYGNLLD 98
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE + L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 99 YLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 155
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 156 GLSRLMTGDT 165
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Query: 100 ASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDW 158
S KL E+ ++K +H NIV L + + L+ E+ G + L G +
Sbjct: 53 TSLQKLFREVRIMKILNHPNIVKLFEVIETE-KTLYLIMEYASGGEVFDYLVAHGRMKEK 111
Query: 159 EKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN-YCSGG 215
E R QI SA Q C + I H ++ ++N+LLD N K+A FG +N + GG
Sbjct: 112 EARSKFR-QIVSAVQY-CHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 165
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 40 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNLLD 98
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE ++ L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 99 YLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 155
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 156 GLSRLMTGDT 165
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 40 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNLLD 98
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE ++ L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 99 YLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 155
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 156 GLSRLMTGDT 165
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 24/171 (14%)
Query: 61 RRRMLKSFGDSVEG----LTLIKGDRAVSRNLTVVAVKARRY---MASQTKLEEEI-LLK 112
+R LK D EG ++L D +VAVKA + ++ ++EI +L+
Sbjct: 12 HKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILR 71
Query: 113 SSSHLNIVTLLGYPQD-GLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIAL-QIDS 170
+ H +I+ G +D G + LV E++ GSLR D+ R +I L Q+
Sbjct: 72 TLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLR----------DYLPRHSIGLAQLLL 121
Query: 171 ANQMVC---MYSKPPIY-HGNITSDNILLDELCNAKLAGFGAANYCSGGSN 217
Q +C Y Y H N+ + N+LLD K+ FG A G
Sbjct: 122 FAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 172
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 38 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIIIEFMTYGNLLD 96
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE + L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 97 YLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 153
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 154 GLSRLMTGDT 163
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 45 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNLLD 103
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE ++ L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 104 YLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 160
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 161 GLSRLMTGDT 170
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 53 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNLLD 111
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE ++ L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 112 YLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 168
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 169 GLSRLMTGDT 178
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 106 EEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIA 165
+E ++L +H I+ + G QD Q+ ++ ++++ G L LR+ + +A
Sbjct: 55 DERLMLSIVTHPFIIRMWGTFQDA-QQIFMIMDYIEGGELFSLLRKSQR---FPNPVAKF 110
Query: 166 LQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS 213
+ + ++SK IY ++ +NILLD+ + K+ FG A Y
Sbjct: 111 YAAEVCLALEYLHSKDIIYR-DLKPENILLDKNGHIKITDFGFAKYVP 157
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL 194
++ E++ GS +L E G PLD E ++A L+ + + ++S+ I H +I + N+L
Sbjct: 97 IIMEYLGGGS-ALDLLEPG-PLD-ETQIATILR-EILKGLDYLHSEKKI-HRDIKAANVL 151
Query: 195 LDELCNAKLAGFGAANYCSGGSNRRN 220
L E KLA FG A + +RN
Sbjct: 152 LSEHGEVKLADFGVAGQLTDTQIKRN 177
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 42 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNLLD 100
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE ++ L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 101 YLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 157
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 158 GLSRLMTGDT 167
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEILLKSSSHLNIVT 121
LK G G ++ ++A R + +K +A L E +L++S H +T
Sbjct: 15 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH-PFLT 73
Query: 122 LLGYPQDGLQRRCLVFEFMQRGSLRWNL-REKGGPLDWEKRLAIALQIDSANQMVCMYSK 180
L Y R C V E+ G L ++L RE+ D + +I SA + ++S+
Sbjct: 74 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED--RARFYGAEIVSA--LDYLHSE 129
Query: 181 PPIYHGNITSDNILLDELCNAKLAGFG 207
+ + ++ +N++LD+ + K+ FG
Sbjct: 130 KNVVYRDLKLENLMLDKDGHIKITDFG 156
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEILLKSSSHLNIVT 121
LK G G ++ ++A R + +K +A L E +L++S H +T
Sbjct: 13 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH-PFLT 71
Query: 122 LLGYPQDGLQRRCLVFEFMQRGSLRWNL-REKGGPLDWEKRLAIALQIDSANQMVCMYSK 180
L Y R C V E+ G L ++L RE+ D + +I SA + ++S+
Sbjct: 72 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED--RARFYGAEIVSA--LDYLHSE 127
Query: 181 PPIYHGNITSDNILLDELCNAKLAGFG 207
+ + ++ +N++LD+ + K+ FG
Sbjct: 128 KNVVYRDLKLENLMLDKDGHIKITDFG 154
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 42 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNLLD 100
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE ++ L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 101 YLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 157
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 158 GLSRLMTGDT 167
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 42 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNLLD 100
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE ++ L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 101 YLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 157
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 158 GLSRLMTGDT 167
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 13/133 (9%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRR---CLVFEFMQRGS 144
VAVK + M + L+E ++K H N+V LLG R ++ EFM G+
Sbjct: 247 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV----CTREPPFYIITEFMTYGN 302
Query: 145 LRWNLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL 203
L LRE + L +A QI SA + + K H N+ + N L+ E K+
Sbjct: 303 LLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRNLAARNCLVGENHLVKV 359
Query: 204 AGFGAANYCSGGS 216
A FG + +G +
Sbjct: 360 ADFGLSRLMTGDT 372
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 45 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNLLD 103
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE ++ L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 104 YLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 160
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 161 GLSRLMTGDT 170
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 41 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNLLD 99
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE ++ L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 100 YLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 156
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 157 GLSRLMTGDT 166
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 44 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNLLD 102
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE ++ L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 103 YLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 159
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 160 GLSRLMTGDT 169
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 45 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNLLD 103
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE ++ L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 104 YLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 160
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 161 GLSRLMTGDT 170
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 31.2 bits (69), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 100 ASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDW 158
S KL E+ ++K +H NIV L + + LV E+ G + L G +
Sbjct: 56 TSLQKLFREVRIMKILNHPNIVKLFEVIETE-KTLYLVMEYASGGEVFDYLVAHGRMKEK 114
Query: 159 EKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS 216
E R A QI SA Q C + I H ++ ++N+LLD N K+A FG +N + G+
Sbjct: 115 EAR-AKFRQIVSAVQY-C--HQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN 168
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 31.2 bits (69), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 130 LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNIT 189
+ R V E++ G L +++++ G +++ A+ + A + + SK IY ++
Sbjct: 93 MDRLYFVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSKGIIYR-DLK 148
Query: 190 SDNILLDELCNAKLAGFG--AANYCSGGSNRRNCEKTSEMAEDI 231
DN++LD + K+A FG N G + + C +A +I
Sbjct: 149 LDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEI 192
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 31.2 bits (69), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 81/197 (41%), Gaps = 28/197 (14%)
Query: 61 RRRMLKSFGDSVEG----LTLIKGDRAVSRNLTVVAVKARRYMA---SQTKLEEEI-LLK 112
+R LK D EG ++L D +VAVKA + A ++ ++EI +L+
Sbjct: 29 HKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILR 88
Query: 113 SSSHLNIVTLLGYPQD-GLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIAL-QIDS 170
+ H +I+ G +D G LV E++ GSLR D+ R +I L Q+
Sbjct: 89 TLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLR----------DYLPRHSIGLAQLLL 138
Query: 171 ANQMVC---MYSKPPIY-HGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSE 226
Q +C Y Y H ++ + N+LLD K+ FG A G +
Sbjct: 139 FAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDG- 197
Query: 227 MAEDINDFVGGQECLDQ 243
D F ECL +
Sbjct: 198 ---DSPVFWYAPECLKE 211
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 31.2 bits (69), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 49/126 (38%), Gaps = 9/126 (7%)
Query: 102 QTKLEEEILLKSSSHLNIVTLLGY-----PQDGLQRRCLVFEFMQRGSLRWNLRE-KGGP 155
+ K E +L K S H NI T G P + LV EF GS+ ++ KG
Sbjct: 66 EIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT 125
Query: 156 LDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG 215
L E I +I + + + H +I N+LL E KL FG +
Sbjct: 126 LKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182
Query: 216 SNRRNC 221
RRN
Sbjct: 183 VGRRNT 188
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VA+K + M+ + L+E ++K H +V L Y + +V E+M +GSL
Sbjct: 43 TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVIEYMSKGSLL 100
Query: 147 WNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ E G L + + +A QI S V + H ++ + NIL+ E K+A
Sbjct: 101 DFLKGEMGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVAD 157
Query: 206 FGAA 209
FG A
Sbjct: 158 FGLA 161
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 185 HGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
H +I + NILL+ +AKLA FG A + +RN
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRN 183
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VA+K + M+ + L+E ++K H +V L Y + +V E+M +GSL
Sbjct: 43 TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVIEYMSKGSLL 100
Query: 147 WNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ E G L + + +A QI S V + H ++ + NIL+ E K+A
Sbjct: 101 DFLKGEMGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVAD 157
Query: 206 FGAA 209
FG A
Sbjct: 158 FGLA 161
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VA+K + M+ + L+E ++K H +V L Y + +V E+M +GSL
Sbjct: 209 TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLL 266
Query: 147 WNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ E G L + + +A QI S V + H ++ + NIL+ E K+A
Sbjct: 267 DFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVAD 323
Query: 206 FGAA 209
FG A
Sbjct: 324 FGLA 327
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 50/119 (42%), Gaps = 23/119 (19%)
Query: 106 EEEILLKSSSHLNIVTLLGYPQDGLQRR---CLVFEFMQRGSLRWNLREKGGPLDWEKRL 162
E E+L K H NI+ LLG + R L E+ G+L LR K L+ +
Sbjct: 72 ELEVLCKLGHHPNIINLLG----ACEHRGYLYLAIEYAPHGNLLDFLR-KSRVLETDPAF 126
Query: 163 AIA--------------LQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
AIA D A M + K I H N+ + NIL+ E AK+A FG
Sbjct: 127 AIANSTASTLSSQQLLHFAADVARGMDYLSQKQFI-HRNLAARNILVGENYVAKIADFG 184
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VA+K + M+ + L+E ++K H +V L Y + +V E+M +GSL
Sbjct: 209 TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLL 266
Query: 147 WNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ E G L + + +A QI S V + H ++ + NIL+ E K+A
Sbjct: 267 DFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVAD 323
Query: 206 FGAA 209
FG A
Sbjct: 324 FGLA 327
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 30.8 bits (68), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 38 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNLLD 96
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE + L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 97 YLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 153
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 154 GLSRLMTGDT 163
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 30.8 bits (68), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VA+K + M+ + L+E ++K H +V L Y + +V E+M +GSL
Sbjct: 43 TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLL 100
Query: 147 WNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ E G L + + +A QI S V + H ++ + NIL+ E K+A
Sbjct: 101 DFLKGEMGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLAAANILVGENLVCKVAD 157
Query: 206 FGAA 209
FG A
Sbjct: 158 FGLA 161
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 40 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNLLD 98
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE + L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 99 YLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 155
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 156 GLSRLMTGDT 165
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQ 127
FG+ EG+ + S + V +K M + L+E ++K H N+V LLG
Sbjct: 24 FGEVYEGVW-----KKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 128 DGLQRRCLVFEFMQRGSLRWNLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHG 186
++ EFM G+L LRE + L +A QI SA + + K H
Sbjct: 78 RE-PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHR 133
Query: 187 NITSDNILLDELCNAKLAGFGAANYCSGGS 216
++ + N L+ E K+A FG + +G +
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDT 163
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 30.8 bits (68), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VA+K + M+ + L+E ++K H +V L Y + +V E+M +GSL
Sbjct: 33 TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIXIVTEYMSKGSLL 90
Query: 147 WNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ E G L + + +A QI S V + H ++ + NIL+ E K+A
Sbjct: 91 DFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVAD 147
Query: 206 FGAA 209
FG A
Sbjct: 148 FGLA 151
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 30.8 bits (68), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 40 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNLLD 98
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE + L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 99 YLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 155
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 156 GLSRLMTGDT 165
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VA+K + M+ + L+E ++K H +V L Y + +V E+M +GSL
Sbjct: 36 TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLL 93
Query: 147 WNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ E G L + + +A QI S V + H ++ + NIL+ E K+A
Sbjct: 94 DFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVAD 150
Query: 206 FGAA 209
FG A
Sbjct: 151 FGLA 154
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
VAVK + M + L+E ++K H N+V LLG ++ EFM G+L
Sbjct: 45 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNLLD 103
Query: 148 NLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
LRE + L +A QI SA + + K H ++ + N L+ E K+A F
Sbjct: 104 YLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADF 160
Query: 207 GAANYCSGGS 216
G + +G +
Sbjct: 161 GLSRLMTGDT 170
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 106 EEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLA-- 163
EE ++ ++ +V L QD + +V E+M G L + P W +
Sbjct: 118 EERDIMAFANSPWVVQLFYAFQDD-RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAE 176
Query: 164 IALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA 208
+ L +D+ + M + H ++ DN+LLD+ + KLA FG
Sbjct: 177 VVLALDAIHSMGFI-------HRDVKPDNMLLDKSGHLKLADFGT 214
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 106 EEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLA-- 163
EE ++ ++ +V L QD + +V E+M G L + P W +
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDD-RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAE 181
Query: 164 IALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA 208
+ L +D+ + M + H ++ DN+LLD+ + KLA FG
Sbjct: 182 VVLALDAIHSMGFI-------HRDVKPDNMLLDKSGHLKLADFGT 219
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VA+K + M+ + L+E ++K H +V L Y + +V E+M +GSL
Sbjct: 209 TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVGEYMSKGSLL 266
Query: 147 WNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ E G L + + +A QI S V + H ++ + NIL+ E K+A
Sbjct: 267 DFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVAD 323
Query: 206 FGAA 209
FG A
Sbjct: 324 FGLA 327
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VA+K + M+ + L+E ++K H +V L Y + +V E+M +GSL
Sbjct: 32 TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLL 89
Query: 147 WNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ E G L + + +A QI S V + H ++ + NIL+ E K+A
Sbjct: 90 DFLKGEMGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVAD 146
Query: 206 FGAA 209
FG A
Sbjct: 147 FGLA 150
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VA+K + M+ + L+E ++K H +V L Y + +V E+M +GSL
Sbjct: 34 TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLL 91
Query: 147 WNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ E G L + + +A QI S V + H ++ + NIL+ E K+A
Sbjct: 92 DFLKGEMGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVAD 148
Query: 206 FGAA 209
FG A
Sbjct: 149 FGLA 152
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 12/126 (9%)
Query: 89 TVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VA+K + M+ ++ LEE ++K H +V L Y + +V E+M +GSL
Sbjct: 34 TKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQL--YAVVSEEPIYIVTEYMNKGSLL 91
Query: 147 WNLREKGGPLDWEKRLAIALQIDSANQM---VCMYSKPPIYHGNITSDNILLDELCNAKL 203
L++ G + L + +D A Q+ + + H ++ S NIL+ K+
Sbjct: 92 DFLKDGEG-----RALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKI 146
Query: 204 AGFGAA 209
A FG A
Sbjct: 147 ADFGLA 152
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 5/111 (4%)
Query: 99 MASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDW 158
M + + E LLK H N+V LL + +R LVFEF+ L +L LD+
Sbjct: 66 MVKKIAMREIKLLKQLRHENLVNLLEVCKKK-KRWYLVFEFVDHTILD-DLELFPNGLDY 123
Query: 159 EKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
+ QI + ++ I H +I +NIL+ + KL FG A
Sbjct: 124 QVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFA 171
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 106 EEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLA-- 163
EE ++ ++ +V L QD + +V E+M G L + P W +
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDD-RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAE 181
Query: 164 IALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA 208
+ L +D+ + M + H ++ DN+LLD+ + KLA FG
Sbjct: 182 VVLALDAIHSMGFI-------HRDVKPDNMLLDKSGHLKLADFGT 219
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 185 HGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
H +I + N+LL E + KLA FG A + +RN
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 174
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VA+K + M+ + L+E ++K H +V L Y + +V E+M +GSL
Sbjct: 43 TRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLL 100
Query: 147 WNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ E G L + + +A QI S V + H ++ + NIL+ E K+A
Sbjct: 101 DFLKGEMGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVAD 157
Query: 206 FGAA 209
FG A
Sbjct: 158 FGLA 161
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 6/153 (3%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQ 127
G+ G+ I R+ + + V + R+ + E ++++ H N+V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 128 DGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGN 187
G +V EF++ G+L + ++ E+ A+ L + Q + + + H +
Sbjct: 88 VG-DELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAV---LQALSVLHAQGVIHRD 141
Query: 188 ITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
I SD+ILL KL+ FG S RR
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VA+K + M+ + L+E ++K H +V L Y + +V E+M +GSL
Sbjct: 292 TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLL 349
Query: 147 WNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ E G L + + +A QI S V + H ++ + NIL+ E K+A
Sbjct: 350 DFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVAD 406
Query: 206 FGAA 209
FG A
Sbjct: 407 FGLA 410
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VA+K + M+ + L+E ++K H +V L Y + +V E+M +GSL
Sbjct: 43 TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLL 100
Query: 147 WNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ E G L + + +A QI S V + H ++ + NIL+ E K+A
Sbjct: 101 DFLKGEMGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVAD 157
Query: 206 FGAA 209
FG A
Sbjct: 158 FGLA 161
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 100 ASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDW 158
+S KL E+ + K +H NIV L + + LV E+ G + L G +
Sbjct: 55 SSLQKLFREVRIXKVLNHPNIVKLFEVIETE-KTLYLVXEYASGGEVFDYLVAHGRXKEK 113
Query: 159 EKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS 216
E R A QI SA Q C + I H ++ ++N+LLD N K+A FG +N + G+
Sbjct: 114 EAR-AKFRQIVSAVQY-C--HQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGN 167
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 6/152 (3%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQ 127
G+ G+ I R+ + + V + R+ + E ++++ H N+V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 128 DGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGN 187
G +V EF++ G+L + ++ E+ A+ L + Q + + + H +
Sbjct: 92 VG-DELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAV---LQALSVLHAQGVIHRD 145
Query: 188 ITSDNILLDELCNAKLAGFGAANYCSGGSNRR 219
I SD+ILL KL+ FG S RR
Sbjct: 146 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 177
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 6/153 (3%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQ 127
G+ G+ I R+ + + V + R+ + E ++++ H N+V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 128 DGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGN 187
G +V EF++ G+L + ++ E+ A+ L + A ++ + H +
Sbjct: 99 VG-DELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQG---VIHRD 152
Query: 188 ITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
I SD+ILL KL+ FG S RR
Sbjct: 153 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 185
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLR--EKGGPLDWEKRL 162
+E++IL K H + L Y + CLV M G +R+++ ++ P E R
Sbjct: 234 VEKKILAKV--HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR- 290
Query: 163 AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNR 218
AI + + ++ + IY ++ +N+LLD+ N +++ G A G +
Sbjct: 291 AIFYTAQIVSGLEHLHQRNIIYR-DLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLR--EKGGPLDWEKRL 162
+E++IL K H + L Y + CLV M G +R+++ ++ P E R
Sbjct: 234 VEKKILAKV--HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR- 290
Query: 163 AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNR 218
AI + + ++ + IY ++ +N+LLD+ N +++ G A G +
Sbjct: 291 AIFYTAQIVSGLEHLHQRNIIYR-DLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 130 LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNIT 189
+ R V E++ G L +++++ G +++ A+ + A + + SK IY ++
Sbjct: 414 MDRLYFVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSKGIIYR-DLK 469
Query: 190 SDNILLDELCNAKLAGFG--AANYCSGGSNRRNCEKTSEMAEDI 231
DN++LD + K+A FG N G + + C +A +I
Sbjct: 470 LDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEI 513
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VA+K + M+ + L+E ++K H +V L Y + +V E+M +GSL
Sbjct: 43 TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVCEYMSKGSLL 100
Query: 147 WNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ E G L + + +A QI S V + H ++ + NIL+ E K+A
Sbjct: 101 DFLKGEMGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVAD 157
Query: 206 FGAA 209
FG A
Sbjct: 158 FGLA 161
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 6/153 (3%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQ 127
G+ G+ I R+ + + V + R+ + E ++++ H N+V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 128 DGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGN 187
G +V EF++ G+L + ++ E+ A+ L + A ++ + H +
Sbjct: 97 VG-DELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQG---VIHRD 150
Query: 188 ITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
I SD+ILL KL+ FG S RR
Sbjct: 151 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 183
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLR--EKGGPLDWEKRL 162
+E++IL K H + L Y + CLV M G +R+++ ++ P E R
Sbjct: 234 VEKKILAKV--HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR- 290
Query: 163 AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNR 218
AI + + ++ + IY ++ +N+LLD+ N +++ G A G +
Sbjct: 291 AIFYTAQIVSGLEHLHQRNIIYR-DLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLR--EKGGPLDWEKRL 162
+E++IL K H + L Y + CLV M G +R+++ ++ P E R
Sbjct: 234 VEKKILAKV--HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR- 290
Query: 163 AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNR 218
AI + + ++ + IY ++ +N+LLD+ N +++ G A G +
Sbjct: 291 AIFYTAQIVSGLEHLHQRNIIYR-DLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 20/147 (13%)
Query: 81 DRAVSRNLTVVAVKARRYMASQTKL-----EEEILLKSSSHLNIVTLLGY-PQDGLQRRC 134
D+ + VAVK + A++ L E E++ H NI+ LLG QDG
Sbjct: 60 DKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLY 117
Query: 135 LVFEFMQRGSLRWNLREKGGP---LDWEKRLAIALQIDSANQMVCMY---------SKPP 182
++ + +G+LR LR + P ++ Q+ + + C Y +
Sbjct: 118 VIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAA 209
H ++ + N+L+ E K+A FG A
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 102 QTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKR 161
+TK+E +IL++ + + + +G + L+ +F++ G L L ++ + + +
Sbjct: 72 RTKMERDILVEVNHPFIVKLHYAFQTEG--KLYLILDFLRGGDLFTRLSKEVMFTEEDVK 129
Query: 162 L---AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
+AL +D + + +Y ++ +NILLDE + KL FG
Sbjct: 130 FYLAELALALDHLHSLGIIYR-------DLKPENILLDEEGHIKLTDFG 171
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 102 QTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKR 161
+TK+E +IL++ + + + +G + L+ +F++ G L L ++ + + +
Sbjct: 73 RTKMERDILVEVNHPFIVKLHYAFQTEG--KLYLILDFLRGGDLFTRLSKEVMFTEEDVK 130
Query: 162 L---AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
+AL +D + + +Y ++ +NILLDE + KL FG
Sbjct: 131 FYLAELALALDHLHSLGIIYR-------DLKPENILLDEEGHIKLTDFG 172
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 79/191 (41%), Gaps = 7/191 (3%)
Query: 34 QFVITIVGSAAVARSVSIALVTLAILKRRRMLKS--FGDSVEGLTLIKGDRAVSRNLTVV 91
+ V + S + ++ LKR ++L S FG +G+ + +G+ +
Sbjct: 15 ELVEPLTPSGTAPNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKI 74
Query: 92 AVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLRE 151
+ A+ ++E +++ S H ++V LLG + LV + M G L + E
Sbjct: 75 LNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ--LVTQLMPHGCLLEYVHE 132
Query: 152 KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY 211
+ + L +QI A M+ + + + H ++ + N+L+ + K+ FG A
Sbjct: 133 HKDNIGSQLLLNWCVQI--AKGMMYLEERR-LVHRDLAARNVLVKSPNHVKITDFGLARL 189
Query: 212 CSGGSNRRNCE 222
G N +
Sbjct: 190 LEGDEKEYNAD 200
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 102 QTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKR 161
+TK+E +IL++ + + + +G + L+ +F++ G L L ++ + + +
Sbjct: 72 RTKMERDILVEVNHPFIVKLHYAFQTEG--KLYLILDFLRGGDLFTRLSKEVMFTEEDVK 129
Query: 162 L---AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
+AL +D + + +Y ++ +NILLDE + KL FG
Sbjct: 130 FYLAELALALDHLHSLGIIYR-------DLKPENILLDEEGHIKLTDFG 171
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 7/129 (5%)
Query: 86 RNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSL 145
RN VVA+K Y Q+ + + ++K + + L +P R C + E +
Sbjct: 77 RNSEVVAIKKMSYSGKQSNEKWQDIIKE---VRFLQKLRHPNTIQYRGCYLREHTAWLVM 133
Query: 146 RWNLREKGGPLDWEKR----LAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNA 201
+ L L+ K+ + IA A Q + + H ++ + NILL E
Sbjct: 134 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLV 193
Query: 202 KLAGFGAAN 210
KL FG+A+
Sbjct: 194 KLGDFGSAS 202
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 102 QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
+ +L EI +++ H NI+ L Y D +R L+ E+ RG L L +K D E+
Sbjct: 67 EHQLRREIEIQAHLHHPNILRLYNYFYDR-RRIYLILEYAPRGELYKEL-QKSCTFD-EQ 123
Query: 161 RLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
R A ++ + M C K + H +I +N+LL K+A FG + + +
Sbjct: 124 RTATIMEELADALMYCHGKK--VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTM 181
Query: 221 C 221
C
Sbjct: 182 C 182
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 7/129 (5%)
Query: 86 RNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSL 145
RN VVA+K Y Q+ + + ++K + + L +P R C + E +
Sbjct: 38 RNSEVVAIKKMSYSGKQSNEKWQDIIKE---VRFLQKLRHPNTIQYRGCYLREHTAWLVM 94
Query: 146 RWNLREKGGPLDWEKR----LAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNA 201
+ L L+ K+ + IA A Q + + H ++ + NILL E
Sbjct: 95 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLV 154
Query: 202 KLAGFGAAN 210
KL FG+A+
Sbjct: 155 KLGDFGSAS 163
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 19/135 (14%)
Query: 90 VVAVKARRYMASQTKLE---EEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
+VAVK + + + + E LL + H +IV G +G +VFE+M+ G L
Sbjct: 45 LVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG-DPLIMVFEYMKHGDLN 103
Query: 147 WNLR---------EKGGP---LDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL 194
LR +G P L + L IA QI A MV + S+ + H ++ + N L
Sbjct: 104 KFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI--AAGMVYLASQHFV-HRDLATRNCL 160
Query: 195 LDELCNAKLAGFGAA 209
+ E K+ FG +
Sbjct: 161 VGENLLVKIGDFGMS 175
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 23/138 (16%)
Query: 90 VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGY----PQDGLQRRCLVFEFMQRG 143
VAVK + M + L+E ++K H N+V LLG P +V E+M G
Sbjct: 59 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPP-----FYIVTEYMPYG 113
Query: 144 SLRWNLREKGGPLDWEKRLAIAL-----QIDSANQMVCMYSKPPIYHGNITSDNILLDEL 198
+L LRE + E+ A+ L QI SA + + K H ++ + N L+ E
Sbjct: 114 NLLDYLRE----CNREEVTAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGEN 166
Query: 199 CNAKLAGFGAANYCSGGS 216
K+A FG + +G +
Sbjct: 167 HVVKVADFGLSRLMTGDT 184
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 130 LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNIT 189
+ R V E++ G L +++++ G +++ A+ + + + ++ + IY ++
Sbjct: 92 VDRLYFVMEYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISIGLFFLHKRGIIYR-DLK 147
Query: 190 SDNILLDELCNAKLAGFG--AANYCSGGSNRRNCEKTSEMAEDI 231
DN++LD + K+A FG + G + R C +A +I
Sbjct: 148 LDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEI 191
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 6/152 (3%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQ 127
G+ G+ I R+ + + V + R+ + E ++++ H N+V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 128 DGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGN 187
G +V EF++ G+L + ++ E+ A+ L + A ++ + H +
Sbjct: 142 VG-DELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQG---VIHRD 195
Query: 188 ITSDNILLDELCNAKLAGFGAANYCSGGSNRR 219
I SD+ILL KL+ FG S RR
Sbjct: 196 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 227
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 20/147 (13%)
Query: 81 DRAVSRNLTVVAVKARRYMASQTKL-----EEEILLKSSSHLNIVTLLGY-PQDGLQRRC 134
D+ + VAVK + A++ L E E++ H NI+ LLG QDG
Sbjct: 60 DKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLY 117
Query: 135 LVFEFMQRGSLRWNLREKGGP---LDWEKRLAIALQIDSANQMVCMY---------SKPP 182
++ + +G+LR LR + P ++ Q+ + + C Y +
Sbjct: 118 VIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAA 209
H ++ + N+L+ E K+A FG A
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 88 LTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
L V+ R Y S++ E ++ SH ++V G G LV EF++ GSL
Sbjct: 45 LKVLDKAHRNY--SESFFEAASMMSKLSHKHLVLNYGVCVCG-DENILVQEFVKFGSLDT 101
Query: 148 NLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL 195
L++ ++ +L +A Q+ +A + + + HGN+ + NILL
Sbjct: 102 YLKKNKNCINILWKLEVAKQLAAAMHFL---EENTLIHGNVCAKNILL 146
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 69/167 (41%), Gaps = 18/167 (10%)
Query: 60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNI 119
K+ + G G D A + + + + ++ + + E ++++ + + NI
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 120 VTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI------ALQIDSANQ 173
V L G +V E++ GSL + E +D + A+ AL+ +NQ
Sbjct: 81 VNYLDSYLVG-DELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQ 137
Query: 174 MVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
++ H NI SDNILL + KL FG + ++R+
Sbjct: 138 VI---------HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 175
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 6/152 (3%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQ 127
G+ G+ I R+ + + V + R+ + E ++++ H N+V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 128 DGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGN 187
G +V EF++ G+L + ++ E+ A+ L + A ++ + H +
Sbjct: 219 VG-DELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQG---VIHRD 272
Query: 188 ITSDNILLDELCNAKLAGFGAANYCSGGSNRR 219
I SD+ILL KL+ FG S RR
Sbjct: 273 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 304
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VA+K + M+ + L+E ++K H +V L Y + +V E+M +GSL
Sbjct: 40 TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMNKGSLL 97
Query: 147 WNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ E G L + + ++ QI S V + H ++ + NIL+ E K+A
Sbjct: 98 DFLKGETGKYLRLPQLVDMSAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVAD 154
Query: 206 FGAA 209
FG A
Sbjct: 155 FGLA 158
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (5%)
Query: 89 TVVAVKARRYMAS--QTKLEEEILLKSSSHLN-IVTLLGYPQ-DGLQRRCLVFEFMQRGS 144
+VAVK ++ Q + EI + + H + IV G G Q LV E++ G
Sbjct: 53 ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 112
Query: 145 LRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA 204
LR L+ LD + L + QI M + S+ + H ++ + NIL++ + K+A
Sbjct: 113 LRDFLQRHRARLDASRLLLYSSQI--CKGMEYLGSRRCV-HRDLAARNILVESEAHVKIA 169
Query: 205 GFGAAN 210
FG A
Sbjct: 170 DFGLAK 175
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (5%)
Query: 89 TVVAVKARRYMAS--QTKLEEEILLKSSSHLN-IVTLLGYPQ-DGLQRRCLVFEFMQRGS 144
+VAVK ++ Q + EI + + H + IV G G Q LV E++ G
Sbjct: 40 ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 99
Query: 145 LRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA 204
LR L+ LD + L + QI M + S+ + H ++ + NIL++ + K+A
Sbjct: 100 LRDFLQRHRARLDASRLLLYSSQI--CKGMEYLGSRRCV-HRDLAARNILVESEAHVKIA 156
Query: 205 GFGAAN 210
FG A
Sbjct: 157 DFGLAK 162
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (5%)
Query: 89 TVVAVKARRYMAS--QTKLEEEILLKSSSHLN-IVTLLGYPQ-DGLQRRCLVFEFMQRGS 144
+VAVK ++ Q + EI + + H + IV G G Q LV E++ G
Sbjct: 41 ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 100
Query: 145 LRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA 204
LR L+ LD + L + QI M + S+ + H ++ + NIL++ + K+A
Sbjct: 101 LRDFLQRHRARLDASRLLLYSSQI--CKGMEYLGSRRCV-HRDLAARNILVESEAHVKIA 157
Query: 205 GFGAAN 210
FG A
Sbjct: 158 DFGLAK 163
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 13/145 (8%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARR--YMASQTK--LEEEILLKSSSHLNIVTL 122
FG+ G + G R V+ VA+K + Y Q + L E ++ H N+V L
Sbjct: 55 EFGEVCSGRLKLPGKRDVA-----VAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPP 182
G G + +V EFM+ G+L LR+ G + + + I + + +
Sbjct: 110 EGVVTRG-KPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMG--- 165
Query: 183 IYHGNITSDNILLDELCNAKLAGFG 207
H ++ + NIL++ K++ FG
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFG 190
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 23/119 (19%)
Query: 106 EEEILLKSSSHLNIVTLLGYPQDGLQRR---CLVFEFMQRGSLRWNLREKGGPLDWEKRL 162
E E+L K H NI+ LLG + R L E+ G+L LR K L+ +
Sbjct: 75 ELEVLCKLGHHPNIINLLG----ACEHRGYLYLAIEYAPHGNLLDFLR-KSRVLETDPAF 129
Query: 163 AIA--------------LQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
AIA D A M + K I H ++ + NIL+ E AK+A FG
Sbjct: 130 AIANSTASTLSSQQLLHFAADVARGMDYLSQKQFI-HRDLAARNILVGENYVAKIADFG 187
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 23/119 (19%)
Query: 106 EEEILLKSSSHLNIVTLLGYPQDGLQRR---CLVFEFMQRGSLRWNLREKGGPLDWEKRL 162
E E+L K H NI+ LLG + R L E+ G+L LR K L+ +
Sbjct: 65 ELEVLCKLGHHPNIINLLG----ACEHRGYLYLAIEYAPHGNLLDFLR-KSRVLETDPAF 119
Query: 163 AIA--------------LQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
AIA D A M + K I H ++ + NIL+ E AK+A FG
Sbjct: 120 AIANSTASTLSSQQLLHFAADVARGMDYLSQKQFI-HRDLAARNILVGENYVAKIADFG 177
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VA+K + M+ + L+E ++K H +V L Y + +V E+M +G L
Sbjct: 43 TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVMEYMSKGCLL 100
Query: 147 WNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ E G L + + +A QI S V + H ++ + NIL+ E K+A
Sbjct: 101 DFLKGEMGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVAD 157
Query: 206 FGAA 209
FG A
Sbjct: 158 FGLA 161
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VA+K + M+ + L+E ++K H +V L Y + +V E+M +GSL
Sbjct: 40 TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMNKGSLL 97
Query: 147 WNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ E G L + + ++ QI S V + H ++ + NIL+ E K+A
Sbjct: 98 DFLKGETGKYLRLPQLVDMSAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVAD 154
Query: 206 FGAA 209
FG A
Sbjct: 155 FGLA 158
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NSFVGTAQ--- 199
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S +K D+ W + C
Sbjct: 200 ---YVSPELLTEKSASKSSDL--WALGC 222
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 7/166 (4%)
Query: 59 LKRRRMLKS--FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSH 116
LKR ++L S FG +G+ + +G+ + + A+ ++E +++ S H
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 117 LNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVC 176
++V LLG + LV + M G L + E + + L +QI A M+
Sbjct: 77 PHLVRLLGVCLSPTIQ--LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI--AKGMMY 132
Query: 177 MYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCE 222
+ + + H ++ + N+L+ + K+ FG A G N +
Sbjct: 133 LEERR-LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNAD 177
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQI------DSANQMVCMYSKPPIYHGNI 188
+++E+M+ S+ E LD I +Q+ N ++++ I H ++
Sbjct: 120 IIYEYMENDSI-LKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDV 178
Query: 189 TSDNILLDELCNAKLAGFGAANY 211
NIL+D+ KL+ FG + Y
Sbjct: 179 KPSNILMDKNGRVKLSDFGESEY 201
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL--EEEILLKSSSHLNIVTLLG 124
+FG +E A R + V +K + L E +IL+ HLN+V LLG
Sbjct: 34 AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 93
Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREK 152
++ EF + G+L LR K
Sbjct: 94 ACTKPGGPLMVIVEFCKFGNLSTYLRSK 121
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 13/148 (8%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARR--YMASQTK--LEEEILLKSSSHLNIVTLL 123
FG+ G + G R + VA+K + Y Q + L E ++ H N++ L
Sbjct: 46 FGEVCSGHLKLPGKREI-----FVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
G ++ EFM+ GSL LR+ G + + + I + + + +
Sbjct: 101 GVVTKSTPV-MIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN---Y 156
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANY 211
H ++ + NIL++ K++ FG + +
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRF 184
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL--EEEILLKSSSHLNIVTLLG 124
+FG +E A R + V +K + L E +IL+ HLN+V LLG
Sbjct: 41 AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 100
Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREK 152
++ EF + G+L LR K
Sbjct: 101 ACTKPGGPLMVIVEFCKFGNLSTYLRSK 128
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL--EEEILLKSSSHLNIVTLLG 124
+FG +E A R + V +K + L E +IL+ HLN+V LLG
Sbjct: 32 AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 91
Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREK 152
++ EF + G+L LR K
Sbjct: 92 ACTKPGGPLMVIVEFCKFGNLSTYLRSK 119
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 106 EEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIA 165
E++IL K +S V L Y + CLV M G L++++ G + A
Sbjct: 234 EKQILEKVNSRF--VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMG-----QAGFPEA 286
Query: 166 LQIDSANQMVCMYS---KPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN 217
+ A ++ C + I + ++ +NILLD+ + +++ G A + G
Sbjct: 287 RAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 16/111 (14%)
Query: 111 LKSSSHLNIVTLLGYPQDGLQRRC---LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQ 167
L H NI+ +G + G L+ F ++GSL L K + W + IA
Sbjct: 72 LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL--KANVVSWNELCHIAET 129
Query: 168 IDSANQMVCMYS---------KPPIYHGNITSDNILLDELCNAKLAGFGAA 209
+ A + ++ KP I H +I S N+LL A +A FG A
Sbjct: 130 M--ARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 106 EEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIA 165
E++IL K +S V L Y + CLV M G L++++ G + A
Sbjct: 234 EKQILEKVNSRF--VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMG-----QAGFPEA 286
Query: 166 LQIDSANQMVCMYS---KPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN 217
+ A ++ C + I + ++ +NILLD+ + +++ G A + G
Sbjct: 287 RAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Query: 67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL--EEEILLKSSSHLNIVTLLG 124
+FG +E A R + V +K + L E +IL+ HLN+V LLG
Sbjct: 39 AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98
Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREK 152
++ EF + G+L LR K
Sbjct: 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSK 126
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NXFVGTAQ--- 199
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 200 ---YVSPELLTEKSAXKSSDL--WALGC 222
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 131 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NXFVGTAQ--- 177
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 178 ---YVSPELLTEKSACKSSDL--WALGC 200
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 89 TVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
T VA+K + M+ + L+E ++K H +V L Y + +V E+M +G L
Sbjct: 43 TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGCLL 100
Query: 147 WNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
L+ E G L + + +A QI S V + H ++ + NIL+ E K+A
Sbjct: 101 DFLKGEMGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVAD 157
Query: 206 FGAA 209
FG A
Sbjct: 158 FGLA 161
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 130 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NXFVGTAQ--- 176
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 177 ---YVSPELLTEKSACKSSDL--WALGC 199
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NXFVGTAQ--- 175
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 176 ---YVSPELLTEKSACKSSDL--WALGC 198
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 128 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NXFVGTAQ--- 174
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 175 ---YVSPELLTEKSACKSSDL--WALGC 197
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 106 EEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSL 145
E EILL+ H NI+TL DG + LV E M+ G L
Sbjct: 70 EIEILLRYGQHPNIITLKDVYDDG-KHVYLVTELMRGGEL 108
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NSFVGTAQ--- 200
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 201 ---YVSPELLTEKSACKSSDL--WALGC 223
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 23/174 (13%)
Query: 60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNI 119
K+ + G G D A + + + + ++ + + E ++++ + + NI
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 120 VTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI------ALQIDSANQ 173
V L G +V E++ GSL + E +D + A+ AL+ +NQ
Sbjct: 80 VNYLDSYLVG-DELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQ 136
Query: 174 MVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEM 227
++ H +I SDNILL + KL FG +C+ + ++ K SEM
Sbjct: 137 VI---------HRDIKSDNILLGMDGSVKLTDFG---FCAQITPEQS--KRSEM 176
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 28.1 bits (61), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 106 EEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSL 145
E EILL+ H NI+TL DG + LV E M+ G L
Sbjct: 70 EIEILLRYGQHPNIITLKDVYDDG-KHVYLVTELMRGGEL 108
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 28.1 bits (61), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 54 VTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL----EEEI 109
++LA LKR+ + SFG++ + R +N+T+V + Y+A + +E
Sbjct: 232 ISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFF 291
Query: 110 LLKSSSHLNIVTLLGYP 126
L +S LNI YP
Sbjct: 292 GLVNSKKLNIKIYKTYP 308
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NSFVGTAQ--- 196
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 197 ---YVSPELLTEKSACKSSDL--WALGC 219
>pdb|4A6G|A Chain A, N-Acyl Amino Acid Racemase From Amycalotopsis Sp.
Ts-1-60: G291d-F323y Mutant In Complex With N-Acetyl
Methionine
pdb|4A6G|B Chain B, N-Acyl Amino Acid Racemase From Amycalotopsis Sp.
Ts-1-60: G291d-F323y Mutant In Complex With N-Acetyl
Methionine
pdb|4A6G|C Chain C, N-Acyl Amino Acid Racemase From Amycalotopsis Sp.
Ts-1-60: G291d-F323y Mutant In Complex With N-Acetyl
Methionine
pdb|4A6G|D Chain D, N-Acyl Amino Acid Racemase From Amycalotopsis Sp.
Ts-1-60: G291d-F323y Mutant In Complex With N-Acetyl
Methionine
Length = 368
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 8 TDKEEGWSASFYIASPVNRGEQNYGCQFVIT--IVGSAAVARSVSIALVT--LAILKRRR 63
T EGW +A P+ E N G + V+ ++ + A ++ A VT LA K R
Sbjct: 38 TPAGEGWGECVTMAGPLYSSEYNDGAEHVLRHYLIPALLAAEDITAAKVTPLLAKFKGHR 97
Query: 64 MLK 66
M K
Sbjct: 98 MAK 100
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NXFVGTAQ--- 199
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 200 ---YVSPELLTEKSACKSSDL--WALGC 222
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NXFVGTAQ--- 197
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 198 ---YVSPELLTEKSACKSSDL--WALGC 220
>pdb|1SJA|A Chain A, X-Ray Structure Of O-Succinylbenzoate Synthase Complexed
With N-Acetylmethionine
pdb|1SJA|B Chain B, X-Ray Structure Of O-Succinylbenzoate Synthase Complexed
With N-Acetylmethionine
pdb|1SJA|C Chain C, X-Ray Structure Of O-Succinylbenzoate Synthase Complexed
With N-Acetylmethionine
pdb|1SJA|D Chain D, X-Ray Structure Of O-Succinylbenzoate Synthase Complexed
With N-Acetylmethionine
pdb|1SJB|A Chain A, X-Ray Structure Of O-Succinylbenzoate Synthase Complexed
With O-Succinylbenzoic Acid
pdb|1SJB|B Chain B, X-Ray Structure Of O-Succinylbenzoate Synthase Complexed
With O-Succinylbenzoic Acid
pdb|1SJB|C Chain C, X-Ray Structure Of O-Succinylbenzoate Synthase Complexed
With O-Succinylbenzoic Acid
pdb|1SJB|D Chain D, X-Ray Structure Of O-Succinylbenzoate Synthase Complexed
With O-Succinylbenzoic Acid
pdb|1SJC|A Chain A, X-Ray Structure Of O-Succinylbenzoate Synthase Complexed
With N-Succinyl Methionine
pdb|1SJC|B Chain B, X-Ray Structure Of O-Succinylbenzoate Synthase Complexed
With N-Succinyl Methionine
pdb|1SJC|C Chain C, X-Ray Structure Of O-Succinylbenzoate Synthase Complexed
With N-Succinyl Methionine
pdb|1SJC|D Chain D, X-Ray Structure Of O-Succinylbenzoate Synthase Complexed
With N-Succinyl Methionine
pdb|1SJD|A Chain A, X-Ray Structure Of O-Succinylbenzoate Synthase Complexed
With N-Succinyl Phenylglycine
pdb|1SJD|B Chain B, X-Ray Structure Of O-Succinylbenzoate Synthase Complexed
With N-Succinyl Phenylglycine
pdb|1SJD|C Chain C, X-Ray Structure Of O-Succinylbenzoate Synthase Complexed
With N-Succinyl Phenylglycine
pdb|1SJD|D Chain D, X-Ray Structure Of O-Succinylbenzoate Synthase Complexed
With N-Succinyl Phenylglycine
Length = 368
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 8 TDKEEGWSASFYIASPVNRGEQNYGCQFVIT--IVGSAAVARSVSIALVT--LAILKRRR 63
T EGW +A P+ E N G + V+ ++ + A ++ A VT LA K R
Sbjct: 38 TPAGEGWGECVTMAGPLYSSEYNDGAEHVLRHYLIPALLAAEDITAAKVTPLLAKFKGHR 97
Query: 64 MLK 66
M K
Sbjct: 98 MAK 100
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NXFVGTAQ--- 197
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 198 ---YVSPELLTEKSACKSSDL--WALGC 220
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NXFVGTAQ--- 197
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 198 ---YVSPELLTEKSACKSSDL--WALGC 220
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 135 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NXFVGTAQ--- 181
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 182 ---YVSPELLTEKSACKSSDL--WALGC 204
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NXFVGTAQ--- 200
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 201 ---YVSPELLTEKSACKSSDL--WALGC 223
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL 194
LV E++ G LR L+ LD + L + QI M + S+ + H ++ + NIL
Sbjct: 87 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI--CKGMEYLGSRRCV-HRDLAARNIL 143
Query: 195 LDELCNAKLAGFGAAN 210
++ + K+A FG A
Sbjct: 144 VESEAHVKIADFGLAK 159
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NXFVGTAQ--- 199
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 200 ---YVSPELLTEKSACKSSDL--WALGC 222
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 63/149 (42%), Gaps = 9/149 (6%)
Query: 62 RRMLKSF---GDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLN 118
R L +F G+ G+ I ++ + + V + R+ + E ++++ H N
Sbjct: 44 REYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDN 103
Query: 119 IVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMY 178
+V + G +V EF++ G+L + ++ E+ + L + A +
Sbjct: 104 VVDMYSSYLVG-DELWVVMEFLEGGALTDIVTHTR--MNEEQIATVCLSVLRA---LSYL 157
Query: 179 SKPPIYHGNITSDNILLDELCNAKLAGFG 207
+ H +I SD+ILL KL+ FG
Sbjct: 158 HNQGVIHRDIKSDSILLTSDGRIKLSDFG 186
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 88 LTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
L V+ R Y S++ E ++ SH ++V G G LV EF++ GSL
Sbjct: 45 LKVLDKAHRNY--SESFFEAASMMSKLSHKHLVLNYGVCFCG-DENILVQEFVKFGSLDT 101
Query: 148 NLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL 195
L++ ++ +L +A Q+ A + + + HGN+ + NILL
Sbjct: 102 YLKKNKNCINILWKLEVAKQLAWAMHFL---EENTLIHGNVCAKNILL 146
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 156 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NXFVGTAQ--- 202
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 203 ---YVSPELLTEKSACKSSDL--WALGC 225
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NXFVGTAQ--- 196
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 197 ---YVSPELLTEKSACKSSDL--WALGC 219
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NXFVGTAQ--- 199
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 200 ---YVSPELLTEKSACKSSDL--WALGC 222
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 27.7 bits (60), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 18/167 (10%)
Query: 60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNI 119
K+ + G G D A + + + + ++ + + E ++++ + + NI
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 120 VTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI------ALQIDSANQ 173
V L G +V E++ GSL + E +D + A+ AL+ +NQ
Sbjct: 81 VNYLDSYLVG-DELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQ 137
Query: 174 MVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
++ H +I SDNILL + KL FG + ++R+
Sbjct: 138 VI---------HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 175
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 27.7 bits (60), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 68/173 (39%), Gaps = 29/173 (16%)
Query: 67 SFGDSVEGLT--LIKGDRAVSRNLTVVAVKARRYMASQTKLEE-----EILLKSSSHLNI 119
+FG VE LIK D A++ VAVK + A T+ E ++L +H+NI
Sbjct: 58 AFGKVVEATAYGLIKSDAAMT-----VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 112
Query: 120 VTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK---------------RLAI 164
V LLG G ++ E+ G L LR K K +
Sbjct: 113 VNLLGACTIG-GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN 217
+ A M + SK I H ++ + NILL K+ FG A + SN
Sbjct: 172 SFSYQVAKGMAFLASKNCI-HRDLAARNILLTHGRITKICDFGLARHIKNDSN 223
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NXFVGTAQ--- 199
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 200 ---YVSPELLTEKSACKSSDL--WALGC 222
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 18/167 (10%)
Query: 60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNI 119
K+ + G G D A + + + + ++ + + E ++++ + + NI
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 120 VTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI------ALQIDSANQ 173
V L G +V E++ GSL + E +D + A+ AL+ +NQ
Sbjct: 80 VNYLDSYLVG-DELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQ 136
Query: 174 MVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
++ H +I SDNILL + KL FG + ++R+
Sbjct: 137 VI---------HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 27.7 bits (60), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 18/167 (10%)
Query: 60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNI 119
K+ + G G D A + + + + ++ + + E ++++ + + NI
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 120 VTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI------ALQIDSANQ 173
V L G +V E++ GSL + E +D + A+ AL+ +NQ
Sbjct: 80 VNYLDSYLVG-DELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQ 136
Query: 174 MVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN 220
++ H +I SDNILL + KL FG + ++R+
Sbjct: 137 VI---------HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 27.7 bits (60), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NAFVGTAQ--- 197
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 198 ---YVSPELLTEKSACKSSDL--WALGC 220
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 27.7 bits (60), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLD 242
I H ++ +NILL+E + ++ FG A S S + N FVG +
Sbjct: 158 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA----------NXFVGTAQ--- 204
Query: 243 QRLYIPNEKFKITSLAKLGDIEKWCISC 270
Y+ E S K D+ W + C
Sbjct: 205 ---YVSPELLTEKSACKSSDL--WALGC 227
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 27.7 bits (60), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
L E ++ SH NI+ L G + ++ E+M+ G+L LREK G + + +
Sbjct: 94 LGEAGIMGQFSHHNIIRLEGVISK-YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGM 152
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
I + + + + H ++ + NIL++ K++ FG
Sbjct: 153 LRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFG 192
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 27.7 bits (60), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 12/65 (18%)
Query: 67 SFGDSVEGLT--LIKGDRAVSRNLTVVAVKARRYMASQTKLEE-----EILLKSSSHLNI 119
+FG VE LIK D A++ VAVK + A T+ E ++L +H+NI
Sbjct: 58 AFGKVVEATAYGLIKSDAAMT-----VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 112
Query: 120 VTLLG 124
V LLG
Sbjct: 113 VNLLG 117
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 12/65 (18%)
Query: 67 SFGDSVEGLT--LIKGDRAVSRNLTVVAVKARRYMASQTKLEE-----EILLKSSSHLNI 119
+FG VE LIK D A++ VAVK + A T+ E ++L +H+NI
Sbjct: 53 AFGKVVEATAYGLIKSDAAMT-----VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 107
Query: 120 VTLLG 124
V LLG
Sbjct: 108 VNLLG 112
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 12/65 (18%)
Query: 67 SFGDSVEGLT--LIKGDRAVSRNLTVVAVKARRYMASQTKLEE-----EILLKSSSHLNI 119
+FG VE LIK D A++ VAVK + A T+ E ++L +H+NI
Sbjct: 51 AFGKVVEATAYGLIKSDAAMT-----VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 105
Query: 120 VTLLG 124
V LLG
Sbjct: 106 VNLLG 110
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 27.3 bits (59), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 12/65 (18%)
Query: 67 SFGDSVEGLT--LIKGDRAVSRNLTVVAVKARRYMASQTKLEE-----EILLKSSSHLNI 119
+FG VE LIK D A++ VAVK + A T+ E ++L +H+NI
Sbjct: 35 AFGKVVEATAYGLIKSDAAMT-----VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 89
Query: 120 VTLLG 124
V LLG
Sbjct: 90 VNLLG 94
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 27.3 bits (59), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 13/148 (8%)
Query: 68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARR--YMASQTK--LEEEILLKSSSHLNIVTLL 123
FG+ G + G R + VA+K + Y Q + L E ++ H N++ L
Sbjct: 20 FGEVCSGHLKLPGKREI-----FVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
G ++ EFM+ GSL LR+ G + + + I + + + +
Sbjct: 75 GVVTKSTPV-MIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN---Y 130
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANY 211
H + + NIL++ K++ FG + +
Sbjct: 131 VHRALAARNILVNSNLVCKVSDFGLSRF 158
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,473,603
Number of Sequences: 62578
Number of extensions: 327293
Number of successful extensions: 1447
Number of sequences better than 100.0: 402
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 313
Number of HSP's that attempted gapping in prelim test: 1237
Number of HSP's gapped (non-prelim): 407
length of query: 304
length of database: 14,973,337
effective HSP length: 98
effective length of query: 206
effective length of database: 8,840,693
effective search space: 1821182758
effective search space used: 1821182758
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)