BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046595
(363 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 172/322 (53%), Gaps = 9/322 (2%)
Query: 31 GSARGEPRTNVVKTGTPQKALPIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLT 90
GS + ++ + +P E ++ L +L T+NF K LIG G +G+V+ L
Sbjct: 2 GSKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR 61
Query: 91 DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMG 150
DG A+K+ T + + +F ++ +S +H H V L+G+C E N IL+Y++ G
Sbjct: 62 DGAKVALKR-RTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENG 120
Query: 151 SLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL 210
+L L+G P ++W QR+++ GAA+GL +LH + I+HRDV+S N+LL
Sbjct: 121 NLKRHLYGSD-----LPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILL 172
Query: 211 FDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
++F KI DF ++ + ++ V GT GY PEY + G++T+KSDVYSFGVVL
Sbjct: 173 DENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLF 232
Query: 271 ELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXC 330
E+L R + ++P+ +L WA + +++Q VDP L + P C
Sbjct: 233 EVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKC 292
Query: 331 VQYEADFRPNMTIVVKALQPLL 352
+ ++ RP+M V+ L+ L
Sbjct: 293 LALSSEDRPSMGDVLWKLEYAL 314
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 172/322 (53%), Gaps = 9/322 (2%)
Query: 31 GSARGEPRTNVVKTGTPQKALPIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLT 90
GS + ++ + +P E ++ L +L T+NF K LIG G +G+V+ L
Sbjct: 2 GSKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR 61
Query: 91 DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMG 150
DG A+K+ T + + +F ++ +S +H H V L+G+C E N IL+Y++ G
Sbjct: 62 DGAKVALKR-RTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENG 120
Query: 151 SLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL 210
+L L+G P ++W QR+++ GAA+GL +LH + I+HRDV+S N+LL
Sbjct: 121 NLKRHLYG-----SDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILL 172
Query: 211 FDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
++F KI DF ++ + ++ V GT GY PEY + G++T+KSDVYSFGVVL
Sbjct: 173 DENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLF 232
Query: 271 ELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXC 330
E+L R + ++P+ +L WA + +++Q VDP L + P C
Sbjct: 233 EVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKC 292
Query: 331 VQYEADFRPNMTIVVKALQPLL 352
+ ++ RP+M V+ L+ L
Sbjct: 293 LALSSEDRPSMGDVLWKLEYAL 314
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)
Query: 54 EIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFA 113
++ + L EL + NF K ++G G +G+V+ +L DGT A+K+L E F
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 114 AQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTW 173
++ ++S H + + L G+CM R+LVY + GS+ L R E P L W
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER-----PESQPPLDW 138
Query: 174 NQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAAR 233
+R ++A G+A+GL +LH+ P I+HRDV+++N+LL ++F++ + DF L + D
Sbjct: 139 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDX 197
Query: 234 LHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQS--LV 291
V GT G+ APEY TG+ ++K+DV+ +GV+LLEL+TG++ D L+
Sbjct: 198 HVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 257
Query: 292 TWATPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
W L E K++ VD L +Y C Q RP M+ VV+ L+
Sbjct: 258 DWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 8/298 (2%)
Query: 54 EIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFA 113
++ + L EL + NF K ++G G +G+V+ +L DG A+K+L E F
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 114 AQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTW 173
++ ++S H + + L G+CM R+LVY + GS+ L R E P L W
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER-----PESQPPLDW 130
Query: 174 NQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAAR 233
+R ++A G+A+GL +LH+ P I+HRDV+++N+LL ++F++ + DF L + D
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDX 189
Query: 234 LHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQS--LV 291
V G G+ APEY TG+ ++K+DV+ +GV+LLEL+TG++ D L+
Sbjct: 190 HVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249
Query: 292 TWATPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
W L E K++ VD L +Y C Q RP M+ VV+ L+
Sbjct: 250 DWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 161/303 (53%), Gaps = 24/303 (7%)
Query: 62 ELNRLTSNFGTKAL------IGEGSYGRVFYAKLTDGTPAAIKKLDTS---SAPEPESDF 112
EL +T+NF + + +GEG +G V Y + T A+KKL + E + F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFG-VVYKGYVNNTTVAVKKLAAMVDITTEELKQQF 77
Query: 113 AAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLT 172
++ V+++ +HE+ VELLG+ + ++ LVY + GSL D L G P L+
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT------PPLS 131
Query: 173 WNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAA 232
W+ R K+A GAA G+ FLHE +HRD++S+N+LL + F +KI+DF L S A
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 233 RLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD-HTMPKGQQSLV 291
+ +R++GT Y APE A+ G+IT KSD+YSFGVVLLE++TG VD H P Q L
Sbjct: 189 TVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLD 245
Query: 292 TWATPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPL 351
E ++ +D K+ ND C+ + + RP++ V + LQ +
Sbjct: 246 IKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
Query: 352 LNS 354
S
Sbjct: 305 TAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 160/303 (52%), Gaps = 24/303 (7%)
Query: 62 ELNRLTSNFGTKAL------IGEGSYGRVFYAKLTDGTPAAIKKLDTS---SAPEPESDF 112
EL +T+NF + + +GEG +G V Y + T A+KKL + E + F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFG-VVYKGYVNNTTVAVKKLAAMVDITTEELKQQF 77
Query: 113 AAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLT 172
++ V+++ +HE+ VELLG+ + ++ LVY + GSL D L G P L+
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT------PPLS 131
Query: 173 WNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAA 232
W+ R K+A GAA G+ FLHE +HRD++S+N+LL + F +KI+DF L S A
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 233 RLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD-HTMPKGQQSLV 291
+ R++GT Y APE A+ G+IT KSD+YSFGVVLLE++TG VD H P Q L
Sbjct: 189 TVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLD 245
Query: 292 TWATPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPL 351
E ++ +D K+ ND C+ + + RP++ V + LQ +
Sbjct: 246 IKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
Query: 352 LNS 354
S
Sbjct: 305 TAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 160/303 (52%), Gaps = 24/303 (7%)
Query: 62 ELNRLTSNFGTKAL------IGEGSYGRVFYAKLTDGTPAAIKKLDTS---SAPEPESDF 112
EL +T+NF + + +GEG +G V Y + T A+KKL + E + F
Sbjct: 13 ELKNVTNNFDERPISVGGNKMGEGGFG-VVYKGYVNNTTVAVKKLAAMVDITTEELKQQF 71
Query: 113 AAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLT 172
++ V+++ +HE+ VELLG+ + ++ LVY + GSL D L G P L+
Sbjct: 72 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT------PPLS 125
Query: 173 WNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAA 232
W+ R K+A GAA G+ FLHE +HRD++S+N+LL + F +KI+DF L S A
Sbjct: 126 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 233 RLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD-HTMPKGQQSLV 291
+ R++GT Y APE A+ G+IT KSD+YSFGVVLLE++TG VD H P Q L
Sbjct: 183 XVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLD 239
Query: 292 TWATPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPL 351
E ++ +D K+ ND C+ + + RP++ V + LQ +
Sbjct: 240 IKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
Query: 352 LNS 354
S
Sbjct: 299 TAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 157/298 (52%), Gaps = 24/298 (8%)
Query: 62 ELNRLTSNFGTKAL------IGEGSYGRVFYAKLTDGTPAAIKKLDTS---SAPEPESDF 112
EL +T+NF + + GEG +G V Y + T A+KKL + E + F
Sbjct: 10 ELKNVTNNFDERPISVGGNKXGEGGFG-VVYKGYVNNTTVAVKKLAAMVDITTEELKQQF 68
Query: 113 AAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLT 172
++ V ++ +HE+ VELLG+ + ++ LVY + GSL D L G P L+
Sbjct: 69 DQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT------PPLS 122
Query: 173 WNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAA 232
W+ R K+A GAA G+ FLHE +HRD++S+N+LL + F +KI+DF L S A
Sbjct: 123 WHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 233 RLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD-HTMPKGQQSLV 291
+ +R++GT Y APE A+ G+IT KSD+YSFGVVLLE++TG VD H P Q L
Sbjct: 180 XVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLD 236
Query: 292 TWATPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
E ++ +D K ND C+ + + RP++ V + LQ
Sbjct: 237 IKEEIEDEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 148/295 (50%), Gaps = 26/295 (8%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKL-DTSSAPEPESDFAAQLSVV 119
D+++ + K IG GS+G V A+ G+ A+K L + E ++F +++++
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIM 88
Query: 120 SRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKV 179
RL+H + V +G + N +V ++ + GSL+ +LH + G + L +R+ +
Sbjct: 89 KRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH-KSGAREQ-----LDERRRLSM 142
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
AY AKG+ +LH + PPIVHR+++S N+L+ + K+ DF L+ + T L S
Sbjct: 143 AYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF--LSSKSA 199
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLS 299
GT + APE +KSDVYSFGV+L EL T ++P + P + V + RL
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL- 258
Query: 300 EDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
++ + ++P++ C E RP+ ++ L+PL+ S
Sbjct: 259 --EIPRNLNPQV------------AAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 148/295 (50%), Gaps = 26/295 (8%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKL-DTSSAPEPESDFAAQLSVV 119
D+++ + K IG GS+G V A+ G+ A+K L + E ++F +++++
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIM 88
Query: 120 SRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKV 179
RL+H + V +G + N +V ++ + GSL+ +LH + G + L +R+ +
Sbjct: 89 KRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH-KSGAREQ-----LDERRRLSM 142
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
AY AKG+ +LH + PPIVHRD++S N+L+ + K+ DF L+ + + L S
Sbjct: 143 AYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKA--SXFLXSKXA 199
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLS 299
GT + APE +KSDVYSFGV+L EL T ++P + P + V + RL
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL- 258
Query: 300 EDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
++ + ++P++ C E RP+ ++ L+PL+ S
Sbjct: 259 --EIPRNLNPQV------------AAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 31/300 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAKLTDGTP------AAIKKLDTSSAPEPESDFAAQLSVVSRL 122
N K +GEG++G+VF A+ + P A+K L +S DF + +++ L
Sbjct: 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNL 72
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVL--HGRKGVQGAEPGP--VLTWNQRVK 178
+HEH V+ G C+E + I+V+++ G L+ L HG V AE P LT +Q +
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR 238
+A A G+ +L + VHRD+ + N L+ ++ KI DF ++ T
Sbjct: 133 IAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGH 189
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPR 297
+ + PE M + T +SDV+S GVVL E+ T G++P W +
Sbjct: 190 TMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP--------------WY--Q 233
Query: 298 LSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKPA 357
LS ++V +C+ P C Q E R N+ + LQ L + P
Sbjct: 234 LSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPV 293
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 34/219 (15%)
Query: 75 LIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVV-------SRLKHEHF 127
+IG G +G+V+ A G A+K ++ +P+ D + + V + LKH +
Sbjct: 14 IIGIGGFGKVYRA-FWIGDEVAVK----AARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68
Query: 128 VELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+ L G C++ N LV +FA G L+ VL G++ P ++ W ++ A+G+
Sbjct: 69 IALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR----IPPDILVNWAVQI------ARGM 118
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKS--------KIADFNLTNQSSDTAARLHSTRV 239
+LH++ PI+HRD++SSN+L+ ++ KI DF L + T
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT----KMSA 174
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
G + + APE ++ SDV+S+GV+L ELLTG P
Sbjct: 175 AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 130/290 (44%), Gaps = 32/290 (11%)
Query: 72 TKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELL 131
+ ++G G++G V AK AIK++++ S F +L +SR+ H + V+L
Sbjct: 13 VEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESE---RKAFIVELRQLSRVNHPNIVKLY 68
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G C+ N LV ++A GSL++VLHG AEP P T + ++G+ +LH
Sbjct: 69 GACL--NPVCLVMEYAEGGSLYNVLHG------AEPLPYYTAAHAMSWCLQCSQGVAYLH 120
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEY 250
++HRD++ N+LL KI DF + + H T G+ + APE
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-----TACDIQTHMTNNKGSAAWMAPEV 175
Query: 251 AMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPK 310
++K DV+S+G++L E++T RKP D G + WA V P
Sbjct: 176 FEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWA--------VHNGTRPP 225
Query: 311 LNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKPAGPE 360
L + P C + RP+M +VK + L+ P E
Sbjct: 226 LIKNLP----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE 271
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 130/290 (44%), Gaps = 32/290 (11%)
Query: 72 TKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELL 131
+ ++G G++G V AK AIK++++ S F +L +SR+ H + V+L
Sbjct: 12 VEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESE---RKAFIVELRQLSRVNHPNIVKLY 67
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G C+ N LV ++A GSL++VLHG AEP P T + ++G+ +LH
Sbjct: 68 GACL--NPVCLVMEYAEGGSLYNVLHG------AEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEY 250
++HRD++ N+LL KI DF + + H T G+ + APE
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-----TACDIQTHMTNNKGSAAWMAPEV 174
Query: 251 AMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPK 310
++K DV+S+G++L E++T RKP D G + WA V P
Sbjct: 175 FEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWA--------VHNGTRPP 224
Query: 311 LNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKPAGPE 360
L + P C + RP+M +VK + L+ P E
Sbjct: 225 LIKNLP----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE 270
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 19/231 (8%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
IG GS+G V+ K I K+ PE F +++V+ + +H + + +GY M
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKV-VDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY-M 101
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+N +V Q+ SL+ LH VQ + Q + +A A+G+++LH K
Sbjct: 102 TKDNLAIVTQWCEGSSLYKHLH----VQETK----FQMFQLIDIARQTAQGMDYLHAK-- 151
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQ 255
I+HRD++S+N+ L + KI DF L S + + G+ + APE
Sbjct: 152 -NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQD 210
Query: 256 ---ITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVT---WATPRLSE 300
+ +SDVYS+G+VL EL+TG P H + Q + +A+P LS+
Sbjct: 211 NNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSK 261
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 19/206 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G +G V+ T AIK L + PE+ F + V+ +L+HE V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
E I++ ++ + GSL D L G E G L Q V +A A G+ ++ E++
Sbjct: 84 EEPIYIVI-EYMSKGSLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYV-ERMN 134
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
VHRD+R++N+L+ ++ K+ADF L D ++ R F + APE A+
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALY 189
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKP 278
G+ T KSDV+SFG++L EL T GR P
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 21/207 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G +G V+ T AIK L + PE+ F + V+ +L+HE V+L Y +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEA-FLQEAQVMKKLRHEKLVQL--YAV 74
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
S I +V ++ + GSL D L G E G L Q V +A A G+ ++ E++
Sbjct: 75 VSEEPIYIVTEYMSKGSLLDFLKG-------ETGKYLRLPQLVDMAAQIASGMAYV-ERM 126
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
VHRD+R++N+L+ ++ K+ADF L D ++ R F + APE A+
Sbjct: 127 N--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 181
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
G+ T KSDV+SFG++L EL T GR P
Sbjct: 182 YGRFTIKSDVWSFGILLTELTTKGRVP 208
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 21/207 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G +G V+ T AIK L + PE+ F + V+ +L+HE V+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEA-FLQEAQVMKKLRHEKLVQL--YAV 81
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
S I +V ++ + GSL D L G E G L Q V +A A G+ ++ E++
Sbjct: 82 VSEEPIYIVCEYMSKGSLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYV-ERM 133
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
VHRD+R++N+L+ ++ K+ADF L D ++ R F + APE A+
Sbjct: 134 N--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 188
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
G+ T KSDV+SFG++L EL T GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 21/207 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G +G V+ T AIK L + PE+ F + V+ +L+HE V+L Y +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEA-FLQEAQVMKKLRHEKLVQL--YAV 70
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
S I +V ++ + GSL D L G E G L Q V +A A G+ ++ E++
Sbjct: 71 VSEEPIYIVTEYMSKGSLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYV-ERM 122
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
VHRD+R++N+L+ ++ K+ADF L D ++ R F + APE A+
Sbjct: 123 N--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 177
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
G+ T KSDV+SFG++L EL T GR P
Sbjct: 178 YGRFTIKSDVWSFGILLTELTTKGRVP 204
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 21/207 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G +G V+ T AIK L + PE+ F + V+ +L+HE V+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEA-FLQEAQVMKKLRHEKLVQL--YAV 81
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
S I +V ++ + GSL D L G E G L Q V +A A G+ ++ E++
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYV-ERM 133
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
VHRD+R++N+L+ ++ K+ADF L D ++ R F + APE A+
Sbjct: 134 N--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 188
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
G+ T KSDV+SFG++L EL T GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 21/207 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G +G V+ T AIK L + PE+ F + V+ +L+HE V+L Y +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEA-FLQEAQVMKKLRHEKLVQL--YAV 72
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
S I +V ++ + GSL D L G E G L Q V +A A G+ ++ E++
Sbjct: 73 VSEEPIYIVTEYMSKGSLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYV-ERM 124
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
VHRD+R++N+L+ ++ K+ADF L D ++ R F + APE A+
Sbjct: 125 N--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 179
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
G+ T KSDV+SFG++L EL T GR P
Sbjct: 180 YGRFTIKSDVWSFGILLTELTTKGRVP 206
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 21/207 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G +G V+ T AIK L + PE+ F + V+ +L+HE V+L Y +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEA-FLQEAQVMKKLRHEKLVQL--YAV 330
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
S I +V ++ + GSL D L G E G L Q V +A A G+ ++ E++
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFLKG-------ETGKYLRLPQLVDMAAQIASGMAYV-ERM 382
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
VHRD+R++N+L+ ++ K+ADF L D ++ R F + APE A+
Sbjct: 383 N--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 437
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
G+ T KSDV+SFG++L EL T GR P
Sbjct: 438 YGRFTIKSDVWSFGILLTELTTKGRVP 464
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 21/207 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G +G V+ T AIK L + PE+ F + V+ +L+HE V+L Y +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEA-FLQEAQVMKKLRHEKLVQL--YAV 71
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
S I +V ++ + GSL D L G E G L Q V +A A G+ ++ E++
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFLKG-------ETGKYLRLPQLVDMAAQIASGMAYV-ERM 123
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
VHRD+R++N+L+ ++ K+ADF L D + R F + APE A+
Sbjct: 124 N--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEX---TARQGAKFPIKWTAPEAAL 178
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
G+ T KSDV+SFG++L EL T GR P
Sbjct: 179 YGRFTIKSDVWSFGILLTELTTKGRVP 205
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 107/206 (51%), Gaps = 19/206 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G +G V+ T AIK L + PE+ F + V+ +L+HE V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
E I++ ++ + GSL D L G E G L Q V +A A G+ ++ E++
Sbjct: 84 EEPIYIVI-EYMSKGSLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYV-ERMN 134
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
VHRD+R++N+L+ ++ K+ADF L D + R F + APE A+
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEX---TARQGAKFPIKWTAPEAALY 189
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKP 278
G+ T KSDV+SFG++L EL T GR P
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 134/290 (46%), Gaps = 43/290 (14%)
Query: 76 IGEGSYGRVFYAKLT-DGTPAAIKKL------DTSSAPEPESDFAAQLSVVSRLKHEHFV 128
IG+G +G V +L D + AIK L + E +F ++ ++S L H + V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 129 ELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
+L G + N +V +F G L+ L + A P + W+ ++++ A G+E
Sbjct: 87 KLYG--LMHNPPRMVMEFVPCGDLYHRL-----LDKAHP---IKWSVKLRLMLDIALGIE 136
Query: 189 FLHEKVQPPIVHRDVRSSNVLL--FDD---FKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
++ + PPIVHRD+RS N+ L D+ +K+ADF+L+ QS + + L LG F
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGL-----LGNF 190
Query: 244 GYHAPEY--AMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED 301
+ APE A T+K+D YSF ++L +LTG P D ++ +
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE---------YSYGKIKFINM 241
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPL 351
++ + P + D PP C + RP+ + +VK L L
Sbjct: 242 IREEGLRPTIPEDCPP----RLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 126/245 (51%), Gaps = 29/245 (11%)
Query: 39 TNVVKTGTPQ-KALPIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAI 97
TNV T PQ + L + +I + L RL + +G+G +G V+ T AI
Sbjct: 162 TNVCPTSKPQTQGLAKDAWEIPRESL-RL------EVKLGQGCFGEVWMGTWNGTTRVAI 214
Query: 98 KKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRI-LVYQFATMGSLHDVL 156
K L + PE+ F + V+ +L+HE V+L Y + S I +V ++ + GSL D L
Sbjct: 215 KTLKPGNM-SPEA-FLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFL 270
Query: 157 HGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS 216
G E G L Q V +A A G+ ++ E++ VHRD+R++N+L+ ++
Sbjct: 271 KG-------EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAANILVGENLVC 320
Query: 217 KIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
K+ADF L D ++ R F + APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 321 KVADFGLGRLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 377
Query: 275 -GRKP 278
GR P
Sbjct: 378 KGRVP 382
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 21/207 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G +G V+ T AIK L + PE+ F + V+ +L+HE V+L Y +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEA-FLQEAQVMKKLRHEKLVQL--YAV 247
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
S I +V ++ + GSL D L G E G L Q V +A A G+ ++ E++
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKG-------ETGKYLRLPQLVDMAAQIASGMAYV-ERM 299
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
VHRD+R++N+L+ ++ K+ADF L D ++ R F + APE A+
Sbjct: 300 N--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 354
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
G+ T KSDV+SFG++L EL T GR P
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 21/207 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G +G V+ T AIK L + PE+ F + V+ +L+HE V+L Y +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEA-FLQEAQVMKKLRHEKLVQL--YAV 247
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
S I +V ++ + GSL D L G E G L Q V +A A G+ ++ E++
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKG-------ETGKYLRLPQLVDMAAQIASGMAYV-ERM 299
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
VHRD+R++N+L+ ++ K+ADF L D ++ R F + APE A+
Sbjct: 300 N--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 354
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
G+ T KSDV+SFG++L EL T GR P
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 21/207 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G +G V+ T AIK L + PE+ F + V+ +++HE V+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEA-FLQEAQVMKKIRHEKLVQL--YAV 81
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
S I +V ++ + GSL D L G E G L Q V +A A G+ ++ E++
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYV-ERM 133
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
VHRD+R++N+L+ ++ K+ADF L D ++ R F + APE A+
Sbjct: 134 N--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 188
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
G+ T KSDV+SFG++L EL T GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 21/207 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G +G V+ T AIK L + PE+ F + V+ +L+HE V+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEA-FLQEAQVMKKLRHEKLVQL--YAV 81
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
S I +V ++ + G L D L G E G L Q V +A A G+ ++ E++
Sbjct: 82 VSEEPIYIVMEYMSKGCLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYV-ERM 133
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
VHRD+R++N+L+ ++ K+ADF L D ++ R F + APE A+
Sbjct: 134 N--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 188
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
G+ T KSDV+SFG++L EL T GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 21/207 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G +G V+ T AIK L + PE+ F + V+ +L+HE V+L Y +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEA-FLQEAQVMKKLRHEKLVQL--YAV 78
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
S I +V ++ GSL D L G E G L Q V ++ A G+ ++ E++
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKG-------ETGKYLRLPQLVDMSAQIASGMAYV-ERM 130
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
VHRD+R++N+L+ ++ K+ADF L D ++ R F + APE A+
Sbjct: 131 N--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 185
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
G+ T KSDV+SFG++L EL T GR P
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 133/290 (45%), Gaps = 43/290 (14%)
Query: 76 IGEGSYGRVFYAKLT-DGTPAAIKKL------DTSSAPEPESDFAAQLSVVSRLKHEHFV 128
IG+G +G V +L D + AIK L + E +F ++ ++S L H + V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 129 ELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
+L G + N +V +F G L+ L + A P + W+ ++++ A G+E
Sbjct: 87 KLYG--LMHNPPRMVMEFVPCGDLYHRL-----LDKAHP---IKWSVKLRLMLDIALGIE 136
Query: 189 FLHEKVQPPIVHRDVRSSNVLL--FDD---FKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
++ + PPIVHRD+RS N+ L D+ +K+ADF L+ QS + + L LG F
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGL-----LGNF 190
Query: 244 GYHAPEY--AMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED 301
+ APE A T+K+D YSF ++L +LTG P D ++ +
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE---------YSYGKIKFINM 241
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPL 351
++ + P + D PP C + RP+ + +VK L L
Sbjct: 242 IREEGLRPTIPEDCPP----RLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 128/298 (42%), Gaps = 35/298 (11%)
Query: 73 KALIGEGSYGRVFYAKLTDGTP------AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEH 126
K +GEG++G+VF A+ + P A+K L +S DF + +++ L+H+H
Sbjct: 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE-SARQDFQREAELLTMLQHQH 104
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVL--HG--RKGVQGAE---PGPVLTWNQRVKV 179
V G C E ++V+++ G L+ L HG K + G E PGP L Q + V
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP-LGLGQLLAV 163
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
A A G+ +L VHRD+ + N L+ KI DF ++ T R
Sbjct: 164 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRL 298
+ + PE + + T +SDV+SFGVVL E+ T G++P W +L
Sbjct: 221 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP--------------WY--QL 264
Query: 299 SEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKP 356
S + C+ + P C Q E R ++ V LQ L + P
Sbjct: 265 SNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 322
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 21/207 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G +G V+ T AIK L + PE+ F + V+ +L+HE V+L Y +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEA-FLQEAQVMKKLRHEKLVQL--YAV 247
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
S I +V ++ + GSL D L G E G L Q V +A A G+ ++ E++
Sbjct: 248 VSEEPIYIVGEYMSKGSLLDFLKG-------ETGKYLRLPQLVDMAAQIASGMAYV-ERM 299
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
VHRD+R++N+L+ ++ K+ADF L D ++ R F + APE A+
Sbjct: 300 N--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 354
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
G+ T KSDV+SFG++L EL T GR P
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 21/207 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G +G V+ T AIK L + PE+ F + V+ +L+HE V+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEA-FLQEAQVMKKLRHEKLVQL--YAV 81
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
S I +V ++ + G L D L G E G L Q V +A A G+ ++ E++
Sbjct: 82 VSEEPIYIVTEYMSKGCLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYV-ERM 133
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
VHRD+R++N+L+ ++ K+ADF L D ++ R F + APE A+
Sbjct: 134 N--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 188
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
G+ T KSDV+SFG++L EL T GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 128/299 (42%), Gaps = 35/299 (11%)
Query: 73 KALIGEGSYGRVFYAKLTDGTP------AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEH 126
K +GEG++G+VF A+ + P A+K L +S DF + +++ L+H+H
Sbjct: 17 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE-SARQDFQREAELLTMLQHQH 75
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVL--HG--RKGVQGAE---PGPVLTWNQRVKV 179
V G C E ++V+++ G L+ L HG K + G E PGP L Q + V
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP-LGLGQLLAV 134
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
A A G+ +L VHRD+ + N L+ KI DF ++ T R
Sbjct: 135 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRL 298
+ + PE + + T +SDV+SFGVVL E+ T G++P W +L
Sbjct: 192 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP--------------WY--QL 235
Query: 299 SEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKPA 357
S + C+ + P C Q E R ++ V LQ L + P
Sbjct: 236 SNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPV 294
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 19/220 (8%)
Query: 73 KALIGEGSYGRVFYAKLTDGTP------AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEH 126
K +GEG++G+VF A+ + P A+K L +S DF + +++ L+H+H
Sbjct: 23 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE-SARQDFQREAELLTMLQHQH 81
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVL--HG--RKGVQGAE---PGPVLTWNQRVKV 179
V G C E ++V+++ G L+ L HG K + G E PGP L Q + V
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP-LGLGQLLAV 140
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
A A G+ +L VHRD+ + N L+ KI DF ++ T R
Sbjct: 141 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ + PE + + T +SDV+SFGVVL E+ T G++P
Sbjct: 198 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG++G+V A K T A+K L + + + SD +++ ++ + KH++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGA-----EPGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ + P L+ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
AY A+G+E+L K +HRD+ + NVL+ +D KIADF L +T
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 32/294 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPE-----PESDFAAQLSVVSRLKHEHFVEL 130
+GEG++G+VF A+ + +P K L A + DF + +++ L+HEH V+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 131 LGYCMESNNRILVYQFATMGSLHDVL--HGRKGVQGAEPGPV-----LTWNQRVKVAYGA 183
G C + + I+V+++ G L+ L HG + + P L +Q + +A
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
A G+ +L + VHRD+ + N L+ + KI DF ++ T +
Sbjct: 143 ASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDK 302
+ PE M + T +SDV+SFGV+L E+ T G++P W +LS +
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP--------------WF--QLSNTE 243
Query: 303 VKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKP 356
V +C+ + P C Q E R N+ + K L L + P
Sbjct: 244 VIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKATP 297
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 21/207 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G +G V+ T AIK L + PE+ F + V+ +L+HE V+L Y +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEA-FLQEAQVMKKLRHEKLVQL--YAV 78
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
S I +V ++ GSL D L G E G L Q V ++ A G+ ++ E++
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKG-------ETGKYLRLPQLVDMSAQIASGMAYV-ERM 130
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
VHRD+R++N+L+ ++ K+ADF L D + R F + APE A+
Sbjct: 131 N--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---WTARQGAKFPIKWTAPEAAL 185
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
G+ T KSDV+SFG++L EL T GR P
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG++G+V A K T A+K L + + + SD +++ ++ + KH++
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQ-----GAEPGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ P L+ V
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
AY A+G+E+L K +HRD+ + NVL+ +D KIADF L +T
Sbjct: 141 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ T
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG++G+V A K T A+K L + + + SD +++ ++ + KH++
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGA-----EPGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ + P L+ V
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
AY A+G+E+L K +HRD+ + NVL+ +D KIADF L +T
Sbjct: 148 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ T
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG++G+V A K T A+K L + + + SD +++ ++ + KH++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQ-----GAEPGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ P L+ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
AY A+G+E+L K +HRD+ + NVL+ +D KIADF L +T
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG++G+V A K T A+K L + + + SD +++ ++ + KH++
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGA-----EPGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ + P L+ V
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
AY A+G+E+L K +HRD+ + NVL+ +D KIADF L +T
Sbjct: 145 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ T
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG++G+V A K T A+K L + + + SD +++ ++ + KH++
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGA-----EPGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ + P L+ V
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
AY A+G+E+L K +HRD+ + NVL+ +D KIADF L +T
Sbjct: 149 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ T
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG++G+V A K T A+K L + + + SD +++ ++ + KH++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGA-----EPGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ + P L+ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
AY A+G+E+L K +HRD+ + NVL+ +D KIADF L +T
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 21/207 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G +G V+ T AIK L + PE+ F + V+ +L+HE V+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEA-FLQEAQVMKKLRHEKLVQL--YAV 81
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
S I +V ++ + GSL D L G E G L Q V +A A G+ ++ E++
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYV-ERM 133
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
VHRD+ ++N+L+ ++ K+ADF L D ++ R F + APE A+
Sbjct: 134 N--YVHRDLAAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 188
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
G+ T KSDV+SFG++L EL T GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG++G+V A K T A+K L + + + SD +++ ++ + KH++
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGA-----EPGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ + P L+ V
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
AY A+G+E+L K +HRD+ + NVL+ +D KIADF L +T
Sbjct: 197 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ T
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 118/243 (48%), Gaps = 32/243 (13%)
Query: 42 VKTGTPQKAL---PIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIK 98
++T PQK E+P+ L + RL G G +G V+ T A+K
Sbjct: 4 MQTQKPQKPWWEDEWEVPRETLKLVERL----------GAGQFGEVWMGYYNGHTKVAVK 53
Query: 99 KLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHG 158
L S P++ F A+ +++ +L+H+ V L + I+ ++ GSL D L
Sbjct: 54 SLKQGSM-SPDA-FLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKT 110
Query: 159 RKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKI 218
G++ LT N+ + +A A+G+ F+ E+ +HRD+R++N+L+ D KI
Sbjct: 111 PSGIK-------LTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKI 160
Query: 219 ADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMTGQITQKSDVYSFGVVLLELLT-G 275
ADF L D ++ R F + APE G T KSDV+SFG++L E++T G
Sbjct: 161 ADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 217
Query: 276 RKP 278
R P
Sbjct: 218 RIP 220
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG++G+V A K T A+K L + + + SD +++ ++ + KH++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGA-----EPGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ + P L+ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
AY A+G+E+L K +HRD+ + NVL+ +D KIADF L +T
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 43/290 (14%)
Query: 76 IGEGSYGRVFYAKLT-DGTPAAIKKL------DTSSAPEPESDFAAQLSVVSRLKHEHFV 128
IG+G +G V +L D + AIK L + E +F ++ ++S L H + V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 129 ELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
+L G + N +V +F G L+ L + A P + W+ ++++ A G+E
Sbjct: 87 KLYG--LMHNPPRMVMEFVPCGDLYHRL-----LDKAHP---IKWSVKLRLMLDIALGIE 136
Query: 189 FLHEKVQPPIVHRDVRSSNVLL--FDD---FKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
++ + PPIVHRD+RS N+ L D+ +K+ADF + QS + + L LG F
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGL-----LGNF 190
Query: 244 GYHAPEY--AMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED 301
+ APE A T+K+D YSF ++L +LTG P D ++ +
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE---------YSYGKIKFINM 241
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPL 351
++ + P + D PP C + RP+ + +VK L L
Sbjct: 242 IREEGLRPTIPEDCPP----RLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 108/215 (50%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG++G+V A K + A+K L + E SD +++ ++ + KH++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGAE-----PGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ + P +T+ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
Y A+G+E+L + +HRD+ + NVL+ ++ KIADF L ++ +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG++G+V A K + A+K L + + SD +++ ++ + KH++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGAE-----PGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ + P +T+ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
Y A+G+E+L + +HRD+ + NVL+ ++ KIADF L ++ +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 117/242 (48%), Gaps = 32/242 (13%)
Query: 43 KTGTPQKAL---PIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKK 99
+T PQK E+P+ L + RL G G +G V+ T A+K
Sbjct: 1 QTQKPQKPWWEDEWEVPRETLKLVERL----------GAGQFGEVWMGYYNGHTKVAVKS 50
Query: 100 LDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGR 159
L S P++ F A+ +++ +L+H+ V L + I+ ++ GSL D L
Sbjct: 51 LKQGSM-SPDA-FLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTP 107
Query: 160 KGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIA 219
G++ LT N+ + +A A+G+ F+ E+ +HRD+R++N+L+ D KIA
Sbjct: 108 SGIK-------LTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIA 157
Query: 220 DFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GR 276
DF L D ++ R F + APE G T KSDV+SFG++L E++T GR
Sbjct: 158 DFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
Query: 277 KP 278
P
Sbjct: 215 IP 216
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 19/206 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V+ T A+K L S P++ F A+ +++ +L+H+ V L
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDA-FLAEANLMKQLQHQRLVRLYAVVT 83
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ I+ ++ GSL D L G++ LT N+ + +A A+G+ F+ E+
Sbjct: 84 QEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEER-- 133
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
+HRD+R++N+L+ D KIADF L D ++ R F + APE
Sbjct: 134 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINY 189
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKP 278
G T KSDV+SFG++L E++T GR P
Sbjct: 190 GTFTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG++G+V A K + A+K L + + SD +++ ++ + KH++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGAE-----PGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ + P +T+ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
Y A+G+E+L + +HRD+ + NVL+ ++ KIADF L ++ +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG++G+V A K + A+K L + + SD +++ ++ + KH++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGAE-----PGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ + P +T+ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
Y A+G+E+L + +HRD+ + NVL+ ++ KIADF L ++ ++T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 19/206 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V+ T A+K L S P++ F A+ +++ +L+H+ V L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ I+ ++ GSL D L G++ LT N+ + +A A+G+ F+ E+
Sbjct: 79 QEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEER-- 128
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
+HRD+R++N+L+ D KIADF L D ++ R F + APE
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINY 184
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKP 278
G T KSDV+SFG++L E++T GR P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG GS+G V+ K A+K L+ T+ P+ F ++ V+ + +H + + +GY
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
+ I V Q+ SL+ LH + + + +A A+G+++LH K
Sbjct: 90 TKPQLAI-VTQWCEGSSLYHHLHASE--------TKFEMKKLIDIARQTARGMDYLHAK- 139
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM-- 252
I+HRD++S+N+ L +D KI DF L + S + ++ G+ + APE
Sbjct: 140 --SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 253 -TGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQ 287
+ + +SDVY+FG+VL EL+TG+ P + + Q
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 19/206 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V+ T A+K L S P++ F A+ +++ +L+H+ V L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDA-FLAEANLMKQLQHQRLVRLYAVVT 73
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ I+ ++ GSL D L G++ LT N+ + +A A+G+ F+ E+
Sbjct: 74 QEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEER-- 123
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
+HRD+R++N+L+ D KIADF L D ++ R F + APE
Sbjct: 124 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINY 179
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKP 278
G T KSDV+SFG++L E++T GR P
Sbjct: 180 GTFTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 116/242 (47%), Gaps = 32/242 (13%)
Query: 43 KTGTPQKAL---PIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKK 99
+T PQK E+P+ L + RL G G +G V+ T A+K
Sbjct: 3 QTQKPQKPWWEDEWEVPRETLKLVERL----------GAGQFGEVWMGYYNGHTKVAVKS 52
Query: 100 LDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGR 159
L S P++ F A+ +++ +L+H+ V L + I+ ++ GSL D L
Sbjct: 53 LKQGSM-SPDA-FLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTP 109
Query: 160 KGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIA 219
G++ LT N+ + +A A+G+ F+ E+ +HRD+R++N+L+ D KIA
Sbjct: 110 SGIK-------LTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIA 159
Query: 220 DFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GR 276
DF L D + R F + APE G T KSDV+SFG++L E++T GR
Sbjct: 160 DFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 216
Query: 277 KP 278
P
Sbjct: 217 IP 218
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 116/242 (47%), Gaps = 32/242 (13%)
Query: 43 KTGTPQKAL---PIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKK 99
+T PQK E+P+ L + RL G G +G V+ T A+K
Sbjct: 1 QTQKPQKPWWEDEWEVPRETLKLVERL----------GAGQFGEVWMGYYNGHTKVAVKS 50
Query: 100 LDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGR 159
L S P++ F A+ +++ +L+H+ V L + I+ ++ GSL D L
Sbjct: 51 LKQGSM-SPDA-FLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTP 107
Query: 160 KGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIA 219
G++ LT N+ + +A A+G+ F+ E+ +HRD+R++N+L+ D KIA
Sbjct: 108 SGIK-------LTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIA 157
Query: 220 DFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GR 276
DF L D + R F + APE G T KSDV+SFG++L E++T GR
Sbjct: 158 DFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
Query: 277 KP 278
P
Sbjct: 215 IP 216
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 112/229 (48%), Gaps = 31/229 (13%)
Query: 54 EIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFA 113
EIP+ L + RL G G +G V+ T AIK L + PES F
Sbjct: 5 EIPRESLQLIKRL----------GNGQFGEVWMGTWNGNTKVAIKTLKPGTM-SPES-FL 52
Query: 114 AQLSVVSRLKHEHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLT 172
+ ++ +LKH+ V+L Y + S I +V ++ GSL D L +G P
Sbjct: 53 EEAQIMKKLKHDKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLP----- 105
Query: 173 WNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAA 232
V +A A G+ ++ E++ +HRD+RS+N+L+ + KIADF L D
Sbjct: 106 --NLVDMAAQVAAGMAYI-ERMN--YIHRDLRSANILVGNGLICKIADFGLARLIEDNEX 160
Query: 233 RLHSTRVLGTF--GYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ R F + APE A+ G+ T KSDV+SFG++L EL+T GR P
Sbjct: 161 ---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 19/206 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V+ T A+K L S P++ F A+ +++ +L+H+ V L
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDA-FLAEANLMKQLQHQRLVRLYAVVT 87
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ I+ ++ GSL D L G++ LT N+ + +A A+G+ F+ E+
Sbjct: 88 QEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEER-- 137
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
+HRD+R++N+L+ D KIADF L D + R F + APE
Sbjct: 138 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINY 193
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKP 278
G T KSDV+SFG++L E++T GR P
Sbjct: 194 GTFTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V+ T A+K L S P++ F A+ +++ +L+H+ V L Y +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDA-FLAEANLMKQLQHQRLVRL--YAV 78
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
+ I ++ ++ GSL D L G++ LT N+ + +A A+G+ F+ E+
Sbjct: 79 VTQEPIYIITEYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEER- 130
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
+HRD+R++N+L+ D KIADF L D + R F + APE
Sbjct: 131 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAIN 185
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
G T KSDV+SFG++L E++T GR P
Sbjct: 186 YGTFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 19/206 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V+ T A+K L S P++ F A+ +++ +L+H+ V L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ I+ ++ GSL D L G++ LT N+ + +A A+G+ F+ E+
Sbjct: 79 QEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEER-- 128
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
+HRD+R++N+L+ D KIADF L D + R F + APE
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINY 184
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKP 278
G T KSDV+SFG++L E++T GR P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG GS+G V+ K A+K L+ T+ P+ F ++ V+ + +H + + +GY
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
I V Q+ SL+ LH + + + +A A+G+++LH K
Sbjct: 90 TAPQLAI-VTQWCEGSSLYHHLHASE--------TKFEMKKLIDIARQTARGMDYLHAK- 139
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM-- 252
I+HRD++S+N+ L +D KI DF L + S + ++ G+ + APE
Sbjct: 140 --SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 253 -TGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQ 287
+ + +SDVY+FG+VL EL+TG+ P + + Q
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG +G+V A K + A+K L + + SD +++ ++ + KH++
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGAE-----PGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ + P +T+ V
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
Y A+G+E+L + +HRD+ + NVL+ ++ KIADF L ++ +T
Sbjct: 209 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV++ E+ T
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG++G+V A K + A+K L + + SD +++ ++ + KH++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGAE-----PGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ + P +T+ V
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
Y A+G+E+L + +HRD+ + NVL+ ++ KIADF L ++ +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG++G+V A K + A+K L + + SD +++ ++ + KH++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGAE-----PGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ + P +T+ V
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
Y A+G+E+L + +HRD+ + NVL+ ++ KIADF L ++ +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG +G+V A K + A+K L + + SD +++ ++ + KH++
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGAE-----PGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ + P +T+ V
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
Y A+G+E+L + +HRD+ + NVL+ ++ KIADF L ++ +T
Sbjct: 150 TYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV++ E+ T
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG +G+V A K + A+K L + + SD +++ ++ + KH++
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGAE-----PGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ + P +T+ V
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
Y A+G+E+L + +HRD+ + NVL+ ++ KIADF L ++ +T
Sbjct: 155 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV++ E+ T
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG +G+V A K + A+K L + + SD +++ ++ + KH++
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGAE-----PGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ + P +T+ V
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
Y A+G+E+L + +HRD+ + NVL+ ++ KIADF L ++ +T
Sbjct: 152 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV++ E+ T
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V+ T A+K L S P++ F A+ +++ +L+H+ V L Y +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDA-FLAEANLMKQLQHQRLVRL--YAV 77
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
+ I ++ ++ GSL D L G++ LT N+ + +A A+G+ F+ E+
Sbjct: 78 VTQEPIYIITEYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEER- 129
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
+HRD+R++N+L+ D KIADF L D + R F + APE
Sbjct: 130 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAIN 184
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
G T KSDV+SFG++L E++T GR P
Sbjct: 185 YGTFTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 19/206 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V+ T A+K L S P++ F A+ +++ +L+H+ V L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ I+ ++ GSL D L G++ LT N+ + +A A+G+ F+ E+
Sbjct: 79 QEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEER-- 128
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
+HRD+R++N+L+ D KIADF L D + R F + APE
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINY 184
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKP 278
G T KSDV+SFG++L E++T GR P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG++G+V A K + A+K L + + SD +++ ++ + KH++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGAE-----PGPVLTWNQRVKV 179
+ LLG C + ++ ++A+ G+L + L R+ G++ + P +T+ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
Y A+G+E+L + +HRD+ + NVL+ ++ +IADF L ++ +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 121/293 (41%), Gaps = 27/293 (9%)
Query: 76 IGEGSYGRVFYAKLTD------GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G+GS+G V+ D T A+K ++ S++ +F + SV+ H V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPG-PVLTWNQRVKVAYGAAKGLE 188
LLG + ++V + G L L + PG P T + +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+L+ K VHRD+ + N ++ DF KI DF +T +TA + L + AP
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 249 EYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVD 308
E G T SD++SFGVVL E+ SL LS ++V + V
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 246
Query: 309 PKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKPAGPEA 361
D P C Q+ RP +V L+ L+ P+ PE
Sbjct: 247 DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH--PSFPEV 297
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG++G+V A K + A+K L + + SD +++ ++ + KH++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGAE-----PGPVLTWNQRVKV 179
+ LLG C + ++ +A+ G+L + L R+ G++ + P +T+ V
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
Y A+G+E+L + +HRD+ + NVL+ ++ KIADF L ++ +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 121/293 (41%), Gaps = 27/293 (9%)
Query: 76 IGEGSYGRVFYAKLTD------GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G+GS+G V+ D T A+K ++ S++ +F + SV+ H V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPG-PVLTWNQRVKVAYGAAKGLE 188
LLG + ++V + G L L + PG P T + +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+L+ K VHRD+ + N ++ DF KI DF +T +T + L + AP
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 249 EYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVD 308
E G T SD++SFGVVL E+ SL LS ++V + V
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 246
Query: 309 PKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKPAGPEA 361
D P C Q+ + RP +V L+ L+ P+ PE
Sbjct: 247 DGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLH--PSFPEV 297
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG GS+G V+ K A+K L+ T+ P+ F ++ V+ + +H + + +GY
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
+ I V Q+ SL+ LH + + + +A A+G+++LH K
Sbjct: 78 TKPQLAI-VTQWCEGSSLYHHLHASE--------TKFEMKKLIDIARQTARGMDYLHAK- 127
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM-- 252
I+HRD++S+N+ L +D KI DF L S + ++ G+ + APE
Sbjct: 128 --SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 185
Query: 253 -TGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQ 287
+ + +SDVY+FG+VL EL+TG+ P + + Q
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 221
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 21/213 (9%)
Query: 75 LIGEGSYGRVFYAKLT-DG--TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHE-HFVEL 130
+IGEG++G+V A++ DG AAIK++ ++ + DFA +L V+ +L H + + L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 131 LGYCMESNNRILVYQFATMGSLHDVLHGRKGVQ-------GAEPGPVLTWNQRVKVAYGA 183
LG C L ++A G+L D L + ++ L+ Q + A
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
A+G+++L +K +HRD+ + N+L+ +++ +KIADF L+ ++ + +G
Sbjct: 152 ARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR-----GQEVYVKKTMGRL 203
Query: 244 --GYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ A E T SDV+S+GV+L E+++
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 19/206 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V+ T A+K L S P++ F A+ +++ +L+H+ V L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDA-FLAEANLMKQLQHQRLVRLYAVVT 74
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ I+ ++ GSL D L G++ LT N+ + +A A+G+ F+ E+
Sbjct: 75 QEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEER-- 124
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
+HR++R++N+L+ D KIADF L D ++ R F + APE
Sbjct: 125 -NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINY 180
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKP 278
G T KSDV+SFG++L E++T GR P
Sbjct: 181 GTFTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 21/213 (9%)
Query: 75 LIGEGSYGRVFYAKLT-DG--TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHE-HFVEL 130
+IGEG++G+V A++ DG AAIK++ ++ + DFA +L V+ +L H + + L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 131 LGYCMESNNRILVYQFATMGSLHDVLHGRKGVQ-------GAEPGPVLTWNQRVKVAYGA 183
LG C L ++A G+L D L + ++ L+ Q + A
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
A+G+++L +K +HRD+ + N+L+ +++ +KIADF L+ ++ + +G
Sbjct: 142 ARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR-----GQEVYVKKTMGRL 193
Query: 244 --GYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ A E T SDV+S+GV+L E+++
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 76 IGEGSYGRVFYA--------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEH 126
+GEG++G+V A K + A+K L + + SD +++ ++ + KH++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRK--GVQGAE-----PGPVLTWNQRVKV 179
+ LLG C + ++ +A+ G+L + L R+ G++ + P +T+ V
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
Y A+G+E+L + +HRD+ + NVL+ ++ KIADF L ++ +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 120/293 (40%), Gaps = 27/293 (9%)
Query: 76 IGEGSYGRVFYAKLTD------GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G+GS+G V+ D T A+K ++ S++ +F + SV+ H V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPG-PVLTWNQRVKVAYGAAKGLE 188
LLG + ++V + G L L + PG P T + +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+L+ K VHRD+ + N ++ DF KI DF +T +T + L + AP
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 249 EYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVD 308
E G T SD++SFGVVL E+ SL LS ++V + V
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 246
Query: 309 PKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKPAGPEA 361
D P C Q+ RP +V L+ L+ P+ PE
Sbjct: 247 DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH--PSFPEV 297
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 35/288 (12%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG GS+G V+ K A+K L+ T+ P+ F ++ V+ + +H + + +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
+ I V Q+ SL+ LH + + + +A A+G+++LH K
Sbjct: 74 TKPQLAI-VTQWCEGSSLYHHLHIIE--------TKFEMIKLIDIARQTAQGMDYLHAK- 123
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG 254
I+HRD++S+N+ L +D KI DF L + S + ++ G+ + APE
Sbjct: 124 --SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 255 Q---ITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVT---WATPRLSEDKVKQCVD 308
+ +SDVY+FG+VL EL+TG+ P + + Q + + +P LS
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS--------- 232
Query: 309 PKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKP 356
K+ ++ P C++ + D RP ++ +++ L S P
Sbjct: 233 -KVRSNCP----KAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 19/206 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G G V+ T A+K L S P++ F A+ +++ +L+H+ V L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSM-SPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ I+ ++ GSL D L G++ LT N+ + +A A+G+ F+ E+
Sbjct: 79 QEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEER-- 128
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
+HRD+R++N+L+ D KIADF L D + R F + APE
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEX---TAREGAKFPIKWTAPEAINY 184
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKP 278
G T KSDV+SFG++L E++T GR P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 32/264 (12%)
Query: 59 KLDELNRLTSN----FGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFA 113
KLDE + LT F +GEGSYG V+ A + G AIK++ S + +
Sbjct: 17 KLDE-DSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ---EII 72
Query: 114 AQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTW 173
++S++ + H V+ G ++ + +V ++ GS+ D++ R LT
Sbjct: 73 KEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLR--------NKTLTE 124
Query: 174 NQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAAR 233
++ + KGLE+LH + +HRD+++ N+LL + +K+ADF + Q +D A+
Sbjct: 125 DEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK 181
Query: 234 LHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLV-- 291
V+GT + APE +D++S G+ +E+ G+ P P ++
Sbjct: 182 --RNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT 239
Query: 292 ----TWATPRLSEDK----VKQCV 307
T+ P L D VKQC+
Sbjct: 240 NPPPTFRKPELWSDNFTDFVKQCL 263
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 135/291 (46%), Gaps = 41/291 (14%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG GS+G V+ K A+K L+ T+ P+ F ++ V+ + +H + + +GY
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVK---VAYGAAKGLEFLH 191
+ I V Q+ SL+ LH + T + +K +A A+G+++LH
Sbjct: 102 TKPQLAI-VTQWCEGSSLYHHLH-----------IIETKFEMIKLIDIARQTAQGMDYLH 149
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYA 251
K I+HRD++S+N+ L +D KI DF L + S + ++ G+ + APE
Sbjct: 150 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 252 MTGQ---ITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVT---WATPRLSEDKVKQ 305
+ +SDVY+FG+VL EL+TG+ P + + Q + + +P LS
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS------ 260
Query: 306 CVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKP 356
K+ ++ P C++ + D RP ++ +++ L S P
Sbjct: 261 ----KVRSNCPK----AMKRLMAECLKKKRDERPLFPQILASIELLARSLP 303
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 120/293 (40%), Gaps = 27/293 (9%)
Query: 76 IGEGSYGRVFYAKLTD------GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G+GS+G V+ D T A+K ++ S++ +F + SV+ H V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPG-PVLTWNQRVKVAYGAAKGLE 188
LLG + ++V + G L L + PG P T + +++A A G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+L+ K VHRD+ + N ++ DF KI DF +T +T + L + AP
Sbjct: 142 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 249 EYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVD 308
E G T SD++SFGVVL E+ SL LS ++V + V
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 243
Query: 309 PKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKPAGPEA 361
D P C Q+ RP +V L+ L+ P+ PE
Sbjct: 244 DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH--PSFPEV 294
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 135/291 (46%), Gaps = 41/291 (14%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG GS+G V+ K A+K L+ T+ P+ F ++ V+ + +H + + +GY
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVK---VAYGAAKGLEFLH 191
+ I V Q+ SL+ LH + T + +K +A A+G+++LH
Sbjct: 94 TKPQLAI-VTQWCEGSSLYHHLH-----------IIETKFEMIKLIDIARQTAQGMDYLH 141
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYA 251
K I+HRD++S+N+ L +D KI DF L + S + ++ G+ + APE
Sbjct: 142 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 198
Query: 252 MTGQ---ITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVT---WATPRLSEDKVKQ 305
+ +SDVY+FG+VL EL+TG+ P + + Q + + +P LS
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS------ 252
Query: 306 CVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKP 356
K+ ++ P C++ + D RP ++ +++ L S P
Sbjct: 253 ----KVRSNCPK----AMKRLMAECLKKKRDERPLFPQILASIELLARSLP 295
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 120/293 (40%), Gaps = 27/293 (9%)
Query: 76 IGEGSYGRVFYAKLTD------GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G+GS+G V+ D T A+K ++ S++ +F + SV+ H V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPG-PVLTWNQRVKVAYGAAKGLE 188
LLG + ++V + G L L + PG P T + +++A A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+L+ K VHRD+ + N ++ DF KI DF +T +T + L + AP
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 249 EYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVD 308
E G T SD++SFGVVL E+ SL LS ++V + V
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 245
Query: 309 PKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKPAGPEA 361
D P C Q+ RP +V L+ L+ P+ PE
Sbjct: 246 DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH--PSFPEV 296
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 110/213 (51%), Gaps = 21/213 (9%)
Query: 75 LIGEGSYGRVFYAKLT-DG--TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHE-HFVEL 130
+IGEG++G+V A++ DG AAIK++ ++ + DFA +L V+ +L H + + L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 131 LGYCMESNNRILVYQFATMGSLHDVLHGRKGVQ-------GAEPGPVLTWNQRVKVAYGA 183
LG C L ++A G+L D L + ++ L+ Q + A
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
A+G+++L +K +HR++ + N+L+ +++ +KIADF L+ ++ + +G
Sbjct: 149 ARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR-----GQEVYVKKTMGRL 200
Query: 244 --GYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ A E T SDV+S+GV+L E+++
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 120/293 (40%), Gaps = 27/293 (9%)
Query: 76 IGEGSYGRVFYAKLTD------GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G+GS+G V+ D T A+K ++ S++ +F + SV+ H V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPG-PVLTWNQRVKVAYGAAKGLE 188
LLG + ++V + G L L + PG P T + +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+L+ K VHRD+ + N ++ DF KI DF +T +T + L + AP
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 249 EYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVD 308
E G T SD++SFGVVL E+ SL LS ++V + V
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 246
Query: 309 PKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKPAGPEA 361
D P C Q+ RP +V L+ L+ P+ PE
Sbjct: 247 DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH--PSFPEV 297
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 132/288 (45%), Gaps = 35/288 (12%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG GS+G V+ K A+K L+ T+ P+ F ++ V+ + +H + + +GY
Sbjct: 21 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
+ I V Q+ SL+ LH + + + +A A+G+++LH K
Sbjct: 79 TKPQLAI-VTQWCEGSSLYHHLHIIE--------TKFEMIKLIDIARQTAQGMDYLHAK- 128
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG 254
I+HRD++S+N+ L +D KI DF L S + ++ G+ + APE
Sbjct: 129 --SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 255 Q---ITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVT---WATPRLSEDKVKQCVD 308
+ +SDVY+FG+VL EL+TG+ P + + Q + + +P LS
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS--------- 237
Query: 309 PKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKP 356
K+ ++ P C++ + D RP ++ +++ L S P
Sbjct: 238 -KVRSNCP----KAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 280
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 132/288 (45%), Gaps = 35/288 (12%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG GS+G V+ K A+K L+ T+ P+ F ++ V+ + +H + + +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
+ I V Q+ SL+ LH + + + +A A+G+++LH K
Sbjct: 74 TKPQLAI-VTQWCEGSSLYHHLHIIE--------TKFEMIKLIDIARQTAQGMDYLHAK- 123
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG 254
I+HRD++S+N+ L +D KI DF L S + ++ G+ + APE
Sbjct: 124 --SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 255 Q---ITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVT---WATPRLSEDKVKQCVD 308
+ +SDVY+FG+VL EL+TG+ P + + Q + + +P LS
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS--------- 232
Query: 309 PKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKP 356
K+ ++ P C++ + D RP ++ +++ L S P
Sbjct: 233 -KVRSNCP----KAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 132/288 (45%), Gaps = 35/288 (12%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG GS+G V+ K A+K L+ T+ P+ F ++ V+ + +H + + +GY
Sbjct: 21 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
+ I V Q+ SL+ LH + + + +A A+G+++LH K
Sbjct: 79 TKPQLAI-VTQWCEGSSLYHHLHIIE--------TKFEMIKLIDIARQTAQGMDYLHAK- 128
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG 254
I+HRD++S+N+ L +D KI DF L S + ++ G+ + APE
Sbjct: 129 --SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 255 Q---ITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVT---WATPRLSEDKVKQCVD 308
+ +SDVY+FG+VL EL+TG+ P + + Q + + +P LS
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS--------- 237
Query: 309 PKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKP 356
K+ ++ P C++ + D RP ++ +++ L S P
Sbjct: 238 -KVRSNCPK----AMKRLMAECLKKKRDERPLFPQILASIELLARSLP 280
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 30/223 (13%)
Query: 76 IGEGSYGRV-----FYAKLTDG-TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+GEG +G+V F+ K G T A+K L +++P D ++ +V+ ++ H H ++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPV------------------L 171
L G C + +L+ ++A GSL L + V PG + L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG---PGYLGSGGSRNSSSLDHPDERAL 147
Query: 172 TWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTA 231
T + A+ ++G+++L E +VHRD+ + N+L+ + K KI+DF L+ +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 232 ARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ + ++ + A E T +SDV+SFGV+L E++T
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 134/291 (46%), Gaps = 41/291 (14%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG GS+G V+ K A+K L+ T+ P+ F ++ V+ + +H + + +GY
Sbjct: 43 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVK---VAYGAAKGLEFLH 191
+ I V Q+ SL+ LH + T + +K +A A+G+++LH
Sbjct: 101 TKPQLAI-VTQWCEGSSLYHHLH-----------IIETKFEMIKLIDIARQTAQGMDYLH 148
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYA 251
K I+HRD++S+N+ L +D KI DF L S + ++ G+ + APE
Sbjct: 149 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 205
Query: 252 MTGQ---ITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVT---WATPRLSEDKVKQ 305
+ +SDVY+FG+VL EL+TG+ P + + Q + + +P LS
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS------ 259
Query: 306 CVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKP 356
K+ ++ P C++ + D RP ++ +++ L S P
Sbjct: 260 ----KVRSNCPK----AMKRLMAECLKKKRDERPLFPQILASIELLARSLP 302
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 134/291 (46%), Gaps = 41/291 (14%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG GS+G V+ K A+K L+ T+ P+ F ++ V+ + +H + + +GY
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVK---VAYGAAKGLEFLH 191
+ I V Q+ SL+ LH + T + +K +A A+G+++LH
Sbjct: 102 TKPQLAI-VTQWCEGSSLYHHLH-----------IIETKFEMIKLIDIARQTAQGMDYLH 149
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYA 251
K I+HRD++S+N+ L +D KI DF L S + ++ G+ + APE
Sbjct: 150 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 252 MTGQ---ITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVT---WATPRLSEDKVKQ 305
+ +SDVY+FG+VL EL+TG+ P + + Q + + +P LS
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS------ 260
Query: 306 CVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKP 356
K+ ++ P C++ + D RP ++ +++ L S P
Sbjct: 261 ----KVRSNCPK----AMKRLMAECLKKKRDERPLFPQILASIELLARSLP 303
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 30/223 (13%)
Query: 76 IGEGSYGRV-----FYAKLTDG-TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+GEG +G+V F+ K G T A+K L +++P D ++ +V+ ++ H H ++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPV------------------L 171
L G C + +L+ ++A GSL L + V PG + L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG---PGYLGSGGSRNSSSLDHPDERAL 147
Query: 172 TWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTA 231
T + A+ ++G+++L E +VHRD+ + N+L+ + K KI+DF L+ +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 232 ARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ + ++ + A E T +SDV+SFGV+L E++T
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 30/223 (13%)
Query: 76 IGEGSYGRV-----FYAKLTDG-TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+GEG +G+V F+ K G T A+K L +++P D ++ +V+ ++ H H ++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPV------------------L 171
L G C + +L+ ++A GSL L + V PG + L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG---PGYLGSGGSRNSSSLDHPDERAL 147
Query: 172 TWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTA 231
T + A+ ++G+++L E +VHRD+ + N+L+ + K KI+DF L+ +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 232 ARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ + ++ + A E T +SDV+SFGV+L E++T
Sbjct: 205 SYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 132/288 (45%), Gaps = 35/288 (12%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG GS+G V+ K A+K L+ T+ P+ F ++ V+ + +H + + +GY
Sbjct: 18 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
+ I V Q+ SL+ LH + + + +A A+G+++LH K
Sbjct: 76 TKPQLAI-VTQWCEGSSLYHHLHIIE--------TKFEMIKLIDIARQTAQGMDYLHAK- 125
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG 254
I+HRD++S+N+ L +D KI DF L S + ++ G+ + APE
Sbjct: 126 --SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 183
Query: 255 Q---ITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVT---WATPRLSEDKVKQCVD 308
+ +SDVY+FG+VL EL+TG+ P + + Q + + +P LS
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS--------- 234
Query: 309 PKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKP 356
K+ ++ P C++ + D RP ++ +++ L S P
Sbjct: 235 -KVRSNCP----KAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 277
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 27/250 (10%)
Query: 39 TNVVKTGTPQKALP--IEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKL-----TD 91
T +V+ TP P ++ +K EL R+ ++G G++G V+ T
Sbjct: 14 TELVEPLTPSGTAPNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETV 66
Query: 92 GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGS 151
P AIK L+ ++ P+ +F + +++ + H H V LLG C+ + LV Q G
Sbjct: 67 KIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGC 125
Query: 152 LHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLF 211
L + +H K G++ +L W ++ AKG+ +L E+ +VHRD+ + NVL+
Sbjct: 126 LLEYVHEHKDNIGSQ--LLLNWCVQI------AKGMMYLEER---RLVHRDLAARNVLVK 174
Query: 212 DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLE 271
KI DF L ++ + A E + T +SDV+S+GV + E
Sbjct: 175 SPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWE 234
Query: 272 LLT-GRKPVD 280
L+T G KP D
Sbjct: 235 LMTFGGKPYD 244
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 121/293 (41%), Gaps = 27/293 (9%)
Query: 76 IGEGSYGRVFYAKLTD------GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G+GS+G V+ D T A+K ++ S++ +F + SV+ H V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPG-PVLTWNQRVKVAYGAAKGLE 188
LLG + ++V + G L L + PG P T + +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+L+ K VHR++ + N ++ DF KI DF +T +T + L + AP
Sbjct: 145 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 249 EYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVD 308
E G T SD++SFGVVL E+ SL LS ++V + V
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 246
Query: 309 PKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKPAGPEA 361
D P C Q+ + RP +V L+ L+ P+ PE
Sbjct: 247 DGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLH--PSFPEV 297
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 131/288 (45%), Gaps = 35/288 (12%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG GS+G V+ K A+K L+ T+ P+ F ++ V+ + +H + + +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
I V Q+ SL+ LH + + + +A A+G+++LH K
Sbjct: 74 TAPQLAI-VTQWCEGSSLYHHLHIIE--------TKFEMIKLIDIARQTAQGMDYLHAK- 123
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG 254
I+HRD++S+N+ L +D KI DF L S + ++ G+ + APE
Sbjct: 124 --SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 255 Q---ITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVT---WATPRLSEDKVKQCVD 308
+ +SDVY+FG+VL EL+TG+ P + + Q + + +P LS
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS--------- 232
Query: 309 PKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKP 356
K+ ++ P C++ + D RP ++ +++ L S P
Sbjct: 233 -KVRSNCP----KAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 121/293 (41%), Gaps = 27/293 (9%)
Query: 76 IGEGSYGRVFYAKLTD------GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G+GS+G V+ D T A+K ++ S++ +F + SV+ H V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPG-PVLTWNQRVKVAYGAAKGLE 188
LLG + ++V + G L L + PG P T + +++A A G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+L+ K VHR++ + N ++ DF KI DF +T +T + L + AP
Sbjct: 146 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 249 EYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVD 308
E G T SD++SFGVVL E+ SL LS ++V + V
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 247
Query: 309 PKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKPAGPEA 361
D P C Q+ + RP +V L+ L+ P+ PE
Sbjct: 248 DGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLH--PSFPEV 298
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 76 IGEGSYGRVFYAKL-----TDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+GEG +G+V + G A+K L S +D ++ ++ L HE+ V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 131 LGYCMES--NNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C E N L+ +F GSL + L K + Q++K A KG++
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK--------INLKQQLKYAVQICKGMD 140
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTN--QSSDTAARLHSTRVLGTFGYH 246
+L + VHRD+ + NVL+ + + KI DF LT ++ + R F Y
Sbjct: 141 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY- 196
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE M + SDV+SFGV L ELLT
Sbjct: 197 APECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 75 LIGEGSYGRVFYAKL-----TDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
++G G++G V+ T P AIK L+ ++ P+ +F + +++ + H H V
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LLG C+ + LV Q G L + +H K G++ +L W ++ AKG+ +
Sbjct: 82 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQ--LLLNWCVQI------AKGMMY 132
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPE 249
L E+ +VHRD+ + NVL+ KI DF L ++ + A E
Sbjct: 133 LEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 189
Query: 250 YAMTGQITQKSDVYSFGVVLLELLT-GRKPVD 280
+ T +SDV+S+GV + EL+T G KP D
Sbjct: 190 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 19/206 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V+ A T A+K + S F A+ +V+ L+H+ V+L
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV--EAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ I+ +F GSL D L +G + +P P L + + A+G+ F+ ++
Sbjct: 81 KEPIYIIT-EFMAKGSLLDFLKSDEGSK--QPLPKL-----IDFSAQIAEGMAFIEQR-- 130
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
+HRD+R++N+L+ KIADF L D ++ R F + APE
Sbjct: 131 -NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEAINF 186
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKP 278
G T KSDV+SFG++L+E++T GR P
Sbjct: 187 GSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 14/208 (6%)
Query: 76 IGEGSYGRVF------YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G+GS+G V+ K T AIK ++ +++ +F + SV+ H V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL---TWNQRVKVAYGAAKG 186
LLG + +++ + T G L L + E PVL + ++ +++A A G
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 187 LEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
+ +L+ VHRD+ + N ++ +DF KI DF +T +T + L +
Sbjct: 136 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 192
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
+PE G T SDV+SFGVVL E+ T
Sbjct: 193 SPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 76 IGEGSYGRVFYAKL-----TDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+GEG +G+V + G A+K L S +D ++ ++ L HE+ V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 131 LGYCMES--NNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C E N L+ +F GSL + L K + Q++K A KG++
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK--------INLKQQLKYAVQICKGMD 128
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTN--QSSDTAARLHSTRVLGTFGYH 246
+L + VHRD+ + NVL+ + + KI DF LT ++ + R F Y
Sbjct: 129 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY- 184
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE M + SDV+SFGV L ELLT
Sbjct: 185 APECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 76 IGEGSYGRVFYAKLTDG-------TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+G+GS+G V Y + G T AIK ++ +++ +F + SV+ H V
Sbjct: 27 LGQGSFGMV-YEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 129 ELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL---TWNQRVKVAYGAAK 185
LLG + +++ + T G L L + E PVL + ++ +++A A
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
G+ +L+ VHRD+ + N ++ +DF KI DF +T +T + L +
Sbjct: 144 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 200
Query: 246 HAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+PE G T SDV+SFGVVL E+ T
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 15/207 (7%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
IG G +G V + AIK + S E DF + V+ +L H V+L G C+
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE--DDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
E LV++F G L D L ++G+ AE + + +G+ +L E
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAET--------LLGMCLDVCEGMAYLEEAC- 143
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQ 255
++HRD+ + N L+ ++ K++DF +T D ST + +PE +
Sbjct: 144 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFSFSR 200
Query: 256 ITQKSDVYSFGVVLLELLT-GRKPVDH 281
+ KSDV+SFGV++ E+ + G+ P ++
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIPYEN 227
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 19/206 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V+ A T A+K + S F A+ +V+ L+H+ V+L
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV--EAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ I+ +F GSL D L +G + +P P L + + A+G+ F+ ++
Sbjct: 254 KEPIYIIT-EFMAKGSLLDFLKSDEGSK--QPLPKL-----IDFSAQIAEGMAFIEQR-- 303
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
+HRD+R++N+L+ KIADF L D ++ R F + APE
Sbjct: 304 -NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEAINF 359
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKP 278
G T KSDV+SFG++L+E++T GR P
Sbjct: 360 GSFTIKSDVWSFGILLMEIVTYGRIP 385
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 24/283 (8%)
Query: 76 IGEGSYGRV---FYAKLTDGT--PAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+GEG +G+V Y DGT A+K L + P+ S + ++ ++ L HEH ++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 131 LGYCMESN--NRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C ++ + LV ++ +GSL D L P + Q + A +G+
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL----------PRHSIGLAQLLLFAQQICEGMA 148
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT--FGYH 246
+LH + +HRD+ + NVLL +D KI DF L ++ + R G ++
Sbjct: 149 YLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLA-KAVPEGHEXYRVREDGDSPVFWY 204
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQC 306
APE + SDV+SFGV L ELLT + P L+ A +++ ++ +
Sbjct: 205 APECLKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 263
Query: 307 VDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
++ P C + EA FRP ++ L+
Sbjct: 264 LERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 76 IGEGSYGRVFYAKLTDG-------TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+G+GS+G V Y + G T AIK ++ +++ +F + SV+ H V
Sbjct: 20 LGQGSFGMV-YEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 129 ELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL---TWNQRVKVAYGAAK 185
LLG + +++ + T G L L + E PVL + ++ +++A A
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
G+ +L+ VHRD+ + N ++ +DF KI DF +T +T + L +
Sbjct: 137 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 193
Query: 246 HAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+PE G T SDV+SFGVVL E+ T
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 15/207 (7%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
IG G +G V + AIK + + E DF + V+ +L H V+L G C+
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
E LV++F G L D L ++G+ AE + + +G+ +L E
Sbjct: 76 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAET--------LLGMCLDVCEGMAYLEEAC- 126
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQ 255
++HRD+ + N L+ ++ K++DF +T D ST + +PE +
Sbjct: 127 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFSFSR 183
Query: 256 ITQKSDVYSFGVVLLELLT-GRKPVDH 281
+ KSDV+SFGV++ E+ + G+ P ++
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIPYEN 210
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 76 IGEGSYGRVFYAKLTDG-------TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+G+GS+G V Y + G T AIK ++ +++ +F + SV+ H V
Sbjct: 26 LGQGSFGMV-YEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 129 ELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL---TWNQRVKVAYGAAK 185
LLG + +++ + T G L L + E PVL + ++ +++A A
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
G+ +L+ VHRD+ + N ++ +DF KI DF +T +T + L +
Sbjct: 143 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 246 HAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+PE G T SDV+SFGVVL E+ T
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 14/208 (6%)
Query: 76 IGEGSYGRVF------YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G+GS+G V+ K T AIK ++ +++ +F + SV+ H V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL---TWNQRVKVAYGAAKG 186
LLG + +++ + T G L L + E PVL + ++ +++A A G
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIADG 150
Query: 187 LEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
+ +L+ VHRD+ + N ++ +DF KI DF +T +T + L +
Sbjct: 151 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 207
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
+PE G T SDV+SFGVVL E+ T
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 76 IGEGSYGRVFYAKLTDGTP------AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
IGEG++GRVF A+ P A+K L ++ + ++DF + ++++ + + V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 130 LLGYCMESNNRILVYQFATMGSL----------------HDVLHGRKGVQGAEPGPVLTW 173
LLG C L++++ G L H L R V P P L+
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP-LSC 173
Query: 174 NQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAAR 233
+++ +A A G+ +L E+ VHRD+ + N L+ ++ KIADF L+
Sbjct: 174 AEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 234 LHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ PE + T +SDV+++GVVL E+ + G +P
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 15/207 (7%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
IG G +G V + AIK + + E DF + V+ +L H V+L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
E LV++F G L D L ++G+ AE + + +G+ +L E
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAET--------LLGMCLDVCEGMAYLEEAC- 123
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQ 255
++HRD+ + N L+ ++ K++DF +T D ST + +PE +
Sbjct: 124 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFSFSR 180
Query: 256 ITQKSDVYSFGVVLLELLT-GRKPVDH 281
+ KSDV+SFGV++ E+ + G+ P ++
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYEN 207
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 15/207 (7%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
IG G +G V + AIK + + E DF + V+ +L H V+L G C+
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
E LV++F G L D L ++G+ AE + + +G+ +L E
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAET--------LLGMCLDVCEGMAYLEEAC- 121
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQ 255
++HRD+ + N L+ ++ K++DF +T D ST + +PE +
Sbjct: 122 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFSFSR 178
Query: 256 ITQKSDVYSFGVVLLELLT-GRKPVDH 281
+ KSDV+SFGV++ E+ + G+ P ++
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYEN 205
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 29/278 (10%)
Query: 76 IGEGSYGRVFYAKL-TDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG G++G VF +L D T A+K + P+ ++ F + ++ + H + V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
+ +V + G L +GA L +++ AA G+E+L K
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLR----TEGAR----LRVKTLLQMVGDAAAGMEYLESKC 233
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG 254
+HRD+ + N L+ + KI+DF ++ + +D + APE G
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYG 290
Query: 255 QITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNN 313
+ + +SDV+SFG++L E + G P P LS + ++ V+
Sbjct: 291 RYSSESDVWSFGILLWETFSLGASPY----------------PNLSNQQTREFVEKGGRL 334
Query: 314 DYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPL 351
P C YE RP+ + + + LQ +
Sbjct: 335 PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 76 IGEGSYGRVFYAKLTDG-------TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+G+GS+G V Y + G T AIK ++ +++ +F + SV+ H V
Sbjct: 24 LGQGSFGMV-YEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 129 ELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL---TWNQRVKVAYGAAK 185
LLG + +++ + T G L L + E PVL + ++ +++A A
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIAD 140
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
G+ +L+ VHRD+ + N ++ +DF KI DF +T +T + L +
Sbjct: 141 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 246 HAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+PE G T SDV+SFGVVL E+ T
Sbjct: 198 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 76 IGEGSYGRVFYAKLTDG-------TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+G+GS+G V Y + G T AIK ++ +++ +F + SV+ H V
Sbjct: 26 LGQGSFGMV-YEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 129 ELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL---TWNQRVKVAYGAAK 185
LLG + +++ + T G L L + E PVL + ++ +++A A
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
G+ +L+ VHRD+ + N ++ +DF KI DF +T +T + L +
Sbjct: 143 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 246 HAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+PE G T SDV+SFGVVL E+ T
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 76 IGEGSYGRVFYAKLTDG-------TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+G+GS+G V Y + G T AIK ++ +++ +F + SV+ H V
Sbjct: 27 LGQGSFGMV-YEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 129 ELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL---TWNQRVKVAYGAAK 185
LLG + +++ + T G L L + E PVL + ++ +++A A
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
G+ +L+ VHRD+ + N ++ +DF KI DF +T +T + L +
Sbjct: 144 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 200
Query: 246 HAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+PE G T SDV+SFGVVL E+ T
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 30/227 (13%)
Query: 61 DELNRLTSNFGTKAL-----IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQ 115
DE R K L IG+G +G V G A+K + + + F A+
Sbjct: 181 DEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAE 236
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWN 174
SV+++L+H + V+LLG +E + +V ++ GSL D L R VL +
Sbjct: 237 ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-------SVLGGD 289
Query: 175 QRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARL 234
+K + + +E+L VHRD+ + NVL+ +D +K++DF LT ++S
Sbjct: 290 CLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS------ 340
Query: 235 HSTRVLGTF--GYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
ST+ G + APE + + KSDV+SFG++L E+ + GR P
Sbjct: 341 -STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 25/207 (12%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
IG+G +G V G A+K + + + F A+ SV+++L+H + V+LLG +
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 69
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
E + +V ++ GSL D L R VL + +K + + +E+L
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSR-------GRSVLGGDCLLKFSLDVCEAMEYLEGN- 121
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
VHRD+ + NVL+ +D +K++DF LT ++S ST+ G + APE
Sbjct: 122 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEALR 172
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
+ + KSDV+SFG++L E+ + GR P
Sbjct: 173 EKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
IG+G +G V G A+K + + + F A+ SV+++L+H + V+LLG +
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 75
Query: 136 ESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
E + +V ++ GSL D L R VL + +K + + +E+L
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSRGR-------SVLGGDCLLKFSLDVCEAMEYLEGN- 127
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAM 252
VHRD+ + NVL+ +D +K++DF LT ++S ST+ G + APE
Sbjct: 128 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEALR 178
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKP 278
+ KSDV+SFG++L E+ + GR P
Sbjct: 179 EAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 30/227 (13%)
Query: 61 DELNRLTSNFGTKAL-----IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQ 115
DE R K L IG+G +G V G A+K + + + F A+
Sbjct: 9 DEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAE 64
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWN 174
SV+++L+H + V+LLG +E + +V ++ GSL D L R VL +
Sbjct: 65 ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR-------GRSVLGGD 117
Query: 175 QRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARL 234
+K + + +E+L VHRD+ + NVL+ +D +K++DF LT ++S
Sbjct: 118 CLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS------ 168
Query: 235 HSTRVLGTF--GYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
ST+ G + APE + + KSDV+SFG++L E+ + GR P
Sbjct: 169 -STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
IG G +G V + AIK + + E DF + V+ +L H V+L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
E LV++F G L D L ++G+ AE + + +G+ +L E
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAET--------LLGMCLDVCEGMAYLEE--- 121
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT---FGYHAPEYAM 252
++HRD+ + N L+ ++ K++DF +T D T GT + +PE
Sbjct: 122 ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD----QYTSSTGTKFPVKWASPEVFS 177
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKPVDH 281
+ + KSDV+SFGV++ E+ + G+ P ++
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 207
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 114/278 (41%), Gaps = 29/278 (10%)
Query: 76 IGEGSYGRVFYAKL-TDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG G++G VF +L D T A+K + P+ ++ F + ++ + H + V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
+ +V + G L G L +++ AA G+E+L K
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTE--------GARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG 254
+HRD+ + N L+ + KI+DF ++ + +D + APE G
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYG 290
Query: 255 QITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNN 313
+ + +SDV+SFG++L E + G P P LS + ++ V+
Sbjct: 291 RYSSESDVWSFGILLWETFSLGASPY----------------PNLSNQQTREFVEKGGRL 334
Query: 314 DYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPL 351
P C YE RP+ + + + LQ +
Sbjct: 335 PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 130
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 131 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 186
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 244
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 245 --------------PPICTIDVYMIMVKCWMIDADSRPKF 270
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 76 IGEGSYGRVFYAKLTDG-------TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+G+GS+G V Y + G T AIK ++ +++ +F + SV+ H V
Sbjct: 55 LGQGSFGMV-YEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 129 ELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL---TWNQRVKVAYGAAK 185
LLG + +++ + T G L L + E PVL + ++ +++A A
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIAD 171
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
G+ +L+ VHRD+ + N ++ +DF KI DF +T +T + L +
Sbjct: 172 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 228
Query: 246 HAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+PE G T SDV+SFGVVL E+ T
Sbjct: 229 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 123/283 (43%), Gaps = 36/283 (12%)
Query: 76 IGEGSYGRVFYAKLTDGTP---AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLG 132
IG+GS+G VF K D AIK +D A + D +++V+S+ + + G
Sbjct: 30 IGKGSFGEVF--KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
++ ++ ++ GS D+L EPGP L Q + KGL++LH
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLL---------EPGP-LDETQIATILREILKGLDYLHS 137
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
+ + +HRD++++NVLL + + K+ADF + Q +DT ++ +GT + APE
Sbjct: 138 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT--QIKRNXFVGTPFWMAPEVIK 192
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLN 312
K+D++S G+ +EL G P P L+ P P L
Sbjct: 193 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------PTLE 240
Query: 313 NDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSK 355
+Y C+ E FRP ++K L N+K
Sbjct: 241 GNY----SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 279
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 128
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 129 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 242
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 243 --------------PPICTIDVYMIMVKCWMIDADSRPKF 268
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 127
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 128 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 241
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 242 --------------PPICTIDVYMIMVKCWMIDADSRPKF 267
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 126
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 127 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 240
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 241 --------------PPICTIDVYMIMVKCWMIDADSRPKF 266
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 122/283 (43%), Gaps = 24/283 (8%)
Query: 76 IGEGSYGRV---FYAKLTDGT--PAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+GEG +G+V Y DGT A+K L P+ S + ++ ++ L HEH ++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 131 LGYCMESNNRI--LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + + LV ++ +GSL D L P + Q + A +G+
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL----------PRHSIGLAQLLLFAQQICEGMA 131
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT--FGYH 246
+LH + +HR++ + NVLL +D KI DF L ++ + R G ++
Sbjct: 132 YLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLA-KAVPEGHEYYRVREDGDSPVFWY 187
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQC 306
APE + SDV+SFGV L ELLT + P L+ A +++ ++ +
Sbjct: 188 APECLKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 246
Query: 307 VDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
++ P C + EA FRP ++ L+
Sbjct: 247 LERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 129
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 130 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 243
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 244 --------------PPICTIDVYMIMVKCWMIDADSRPKF 269
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 76 IGEGSYGRVF------YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G+GS+G V+ K T AIK ++ +++ +F + SV+ H V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL---TWNQRVKVAYGAAKG 186
LLG + +++ + T G L L + PVL + ++ +++A A G
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMAN--NPVLAPPSLSKMIQMAGEIADG 150
Query: 187 LEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
+ +L+ VHRD+ + N ++ +DF KI DF +T +T + L +
Sbjct: 151 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 207
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
+PE G T SDV+SFGVVL E+ T
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 16/209 (7%)
Query: 76 IGEGSYGRVFYAKLTDG-------TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+G+GS+G V Y + G T AIK ++ +++ +F + SV+ H V
Sbjct: 23 LGQGSFGMV-YEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 129 ELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL---TWNQRVKVAYGAAK 185
LLG + +++ + T G L L + PVL + ++ +++A A
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMAN--NPVLAPPSLSKMIQMAGEIAD 139
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
G+ +L+ VHRD+ + N ++ +DF KI DF +T +T + L +
Sbjct: 140 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 196
Query: 246 HAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+PE G T SDV+SFGVVL E+ T
Sbjct: 197 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 123/283 (43%), Gaps = 36/283 (12%)
Query: 76 IGEGSYGRVFYAKLTDGTP---AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLG 132
IG+GS+G VF K D AIK +D A + D +++V+S+ + + G
Sbjct: 15 IGKGSFGEVF--KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
++ ++ ++ GS D+L EPGP L Q + KGL++LH
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL---------EPGP-LDETQIATILREILKGLDYLHS 122
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
+ + +HRD++++NVLL + + K+ADF + Q +DT ++ +GT + APE
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT--QIKRNXFVGTPFWMAPEVIK 177
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLN 312
K+D++S G+ +EL G P P L+ P P L
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------PTLE 225
Query: 313 NDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSK 355
+Y C+ E FRP ++K L N+K
Sbjct: 226 GNY----SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 264
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 128
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 129 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 242
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 243 --------------PPICTIDVYMIMVKCWMIDADSRPKF 268
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQ--YLLNWCVQI----- 127
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 128 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 241
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 242 --------------PPICTIDVYMIMVKCWMIDADSRPKF 267
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 129
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 130 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 243
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 244 --------------PPICTIDVYMIMVKCWMIDADSRPKF 269
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 16/209 (7%)
Query: 76 IGEGSYGRVFYAKLTDG-------TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+G+GS+G V Y + G T AIK ++ +++ +F + SV+ H V
Sbjct: 20 LGQGSFGMV-YEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 129 ELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL---TWNQRVKVAYGAAK 185
LLG + +++ + T G L L + E PVL + ++ +++A A
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
G+ +L+ VHRD+ + N + +DF KI DF +T +T + L +
Sbjct: 137 GMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 193
Query: 246 HAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+PE G T SDV+SFGVVL E+ T
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 76 IGEGSYGRVFYAKLTDGTP---AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLG 132
IG+GS+G VF K D AIK +D A + D +++V+S+ + + G
Sbjct: 15 IGKGSFGEVF--KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
++ ++ ++ GS D+L EPGP L Q + KGL++LH
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL---------EPGP-LDETQIATILREILKGLDYLHS 122
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
+ + +HRD++++NVLL + + K+ADF + Q +DT + ++ +GT + APE
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIK 177
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLN 312
K+D++S G+ +EL G P P L+ P P L
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------PTLE 225
Query: 313 NDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSK 355
+Y C+ E FRP ++K L N+K
Sbjct: 226 GNY----SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 264
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 129
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 130 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 243
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 244 --------------PPICTIDVYMIMVKCWMIDADSRPKF 269
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 126
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 127 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 240
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 241 --------------PPICTIDVYMIMRKCWMIDADSRPKF 266
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 129
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 130 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 243
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 244 --------------PPICTIDVYMIMRKCWMIDADSRPKF 269
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 126
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 127 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 240
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 241 --------------PPICTIDVYMIMVKCWMIDADSRPKF 266
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 122/283 (43%), Gaps = 24/283 (8%)
Query: 76 IGEGSYGRV---FYAKLTDGT--PAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+GEG +G+V Y DGT A+K L P+ S + ++ ++ L HEH ++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 131 LGYCMESNNRI--LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + + LV ++ +GSL D L P + Q + A +G+
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL----------PRHSIGLAQLLLFAQQICEGMA 131
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT--FGYH 246
+LH + +HR++ + NVLL +D KI DF L ++ + R G ++
Sbjct: 132 YLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLA-KAVPEGHEYYRVREDGDSPVFWY 187
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQC 306
APE + SDV+SFGV L ELLT + P L+ A +++ ++ +
Sbjct: 188 APECLKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 246
Query: 307 VDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
++ P C + EA FRP ++ L+
Sbjct: 247 LERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 76 IGEGSYGRVFYAKLTDGTP---AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLG 132
IG+GS+G VF K D AIK +D A + D +++V+S+ + + G
Sbjct: 35 IGKGSFGEVF--KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
++ ++ ++ GS D+L EPGP L Q + KGL++LH
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLL---------EPGP-LDETQIATILREILKGLDYLHS 142
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
+ + +HRD++++NVLL + + K+ADF + Q +DT + ++ +GT + APE
Sbjct: 143 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIK 197
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLN 312
K+D++S G+ +EL G P P L+ P P L
Sbjct: 198 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------PTLE 245
Query: 313 NDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSK 355
+Y C+ E FRP ++K L N+K
Sbjct: 246 GNY----SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 284
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 85 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 136
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 137 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 192
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 250
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 251 --------------PPICTIDVYMIMRKCWMIDADSRPKF 276
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 133
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 134 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 247
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 248 --------------PPICTIDVYMIMVKCWMIDADSRPKF 273
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 100 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 151
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 152 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 207
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 208 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 265
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 266 --------------PPICTIDVYMIMVKCWMIDADSRPKF 291
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 81 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 132
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 133 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 188
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 246
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 247 --------------PPICTIDVYMIMVKCWMIDADSRPKF 272
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQ--YLLNWCVQI----- 126
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 127 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 240
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 241 --------------PPICTIDVYMIMVKCWMIDADSRPKF 266
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 29/206 (14%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V+ A T A+K + S F A+ +V+ L+H+ V+L
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV--EAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ I+ +F GSL D L +G + +P P L + + A+G+ F+ ++
Sbjct: 248 KEPIYIIT-EFMAKGSLLDFLKSDEGSK--QPLPKL-----IDFSAQIAEGMAFIEQR-- 297
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
+HRD+R++N+L+ KIADF L RV F + APE
Sbjct: 298 -NYIHRDLRAANILVSASLVCKIADFGLA-------------RVGAKFPIKWTAPEAINF 343
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKP 278
G T KSDV+SFG++L+E++T GR P
Sbjct: 344 GSFTIKSDVWSFGILLMEIVTYGRIP 369
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 28/235 (11%)
Query: 62 ELNRLTSNFGTKALIGEGSYGRVFYA------KLTDGTPAAIKKLDTSSAPEPESDFAAQ 115
E R FG ++G G++G+V A K A+K L + ++
Sbjct: 41 EFPRENLEFGK--VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSE 98
Query: 116 LSVVSRL-KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGR--------------K 160
L ++++L HE+ V LLG C S L++++ G L + L + K
Sbjct: 99 LKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQK 158
Query: 161 GVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIAD 220
++ E VLT+ + AY AKG+EFL K VHRD+ + NVL+ KI D
Sbjct: 159 RLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICD 215
Query: 221 FNLTNQ-SSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
F L SD+ + L + APE G T KSDV+S+G++L E+ +
Sbjct: 216 FGLARDIMSDSNYVVRGNARLPV-KWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 69 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 120
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 121 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 234
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 235 --------------PPICTIDVYMIMVKCWMIDADSRPKF 260
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
IG G +G V + AIK + + E DF + V+ +L H V+L G C+
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
E LV +F G L D L ++G+ AE + + +G+ +L E
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLRTQRGLFAAET--------LLGMCLDVCEGMAYLEEAC- 124
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQ 255
++HRD+ + N L+ ++ K++DF +T D ST + +PE +
Sbjct: 125 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFSFSR 181
Query: 256 ITQKSDVYSFGVVLLELLT-GRKPVDH 281
+ KSDV+SFGV++ E+ + G+ P ++
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPYEN 208
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 126/294 (42%), Gaps = 46/294 (15%)
Query: 76 IGEGSYGRV---FYAKLTDGT--PAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+GEG +G+V Y DGT A+K L P+ S + ++ ++ L HEH V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 131 LGYCMESNNRI--LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + + LV ++ +GSL D L P + Q + A +G+
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----------PRHCVGLAQLLLFAQQICEGMA 125
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT--FGYH 246
+LH + +HR + + NVLL +D KI DF L ++ + R G ++
Sbjct: 126 YLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLA-KAVPEGHEYYRVREDGDSPVFWY 181
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT----GRKP-------VDHTMPKGQQSLVTWAT 295
APE + SDV+SFGV L ELLT + P + HT +GQ +++
Sbjct: 182 APECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHT--QGQMTVL---- 235
Query: 296 PRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
RL+E + P+ P C + EA FRP +V LQ
Sbjct: 236 -RLTELLERGERLPR-----PDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQ 283
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 126/294 (42%), Gaps = 46/294 (15%)
Query: 76 IGEGSYGRV---FYAKLTDGT--PAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+GEG +G+V Y DGT A+K L P+ S + ++ ++ L HEH V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 131 LGYCMESNNRI--LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + + LV ++ +GSL D L P + Q + A +G+
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----------PRHCVGLAQLLLFAQQICEGMA 126
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT--FGYH 246
+LH + +HR + + NVLL +D KI DF L ++ + R G ++
Sbjct: 127 YLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLA-KAVPEGHEYYRVREDGDSPVFWY 182
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT----GRKP-------VDHTMPKGQQSLVTWAT 295
APE + SDV+SFGV L ELLT + P + HT +GQ +++
Sbjct: 183 APECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHT--QGQMTVL---- 236
Query: 296 PRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
RL+E + P+ P C + EA FRP +V LQ
Sbjct: 237 -RLTELLERGERLPR-----PDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQ 284
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 122/284 (42%), Gaps = 31/284 (10%)
Query: 76 IGEGSYGRVFYAKLT----DGTP--AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G G++G V+ +++ D +P A+K L + + E DF + ++S+L H++ V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
+G ++S R ++ + G L L + + ++P L + VA A G ++
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLLHVARDIACGCQY 170
Query: 190 LHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
L E +HRD+ + N LL +KI DF + + + +
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQ 305
PE M G T K+D +SFGV+L E+ + G P K Q ++ + T D K
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFVTSGGRMDPPKN 284
Query: 306 CVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
C P C Q++ + RPN I+++ ++
Sbjct: 285 CPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 122/284 (42%), Gaps = 31/284 (10%)
Query: 76 IGEGSYGRVFYAKLT----DGTP--AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G G++G V+ +++ D +P A+K L + + E DF + ++S+L H++ V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
+G ++S R ++ + G L L + + ++P L + VA A G ++
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLLHVARDIACGCQY 156
Query: 190 LHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
L E +HRD+ + N LL +KI DF + + + +
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQ 305
PE M G T K+D +SFGV+L E+ + G P K Q ++ + T D K
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFVTSGGRMDPPKN 270
Query: 306 CVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
C P C Q++ + RPN I+++ ++
Sbjct: 271 CPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 72 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 123
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
A+G+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 124 -AEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 179
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 237
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 238 --------------PPICTIDVYMIMVKCWMIDADSRPKF 263
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++ G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 133
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 134 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 247
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 248 --------------PPICTIDVYMIMVKCWMIDADSRPKF 273
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 128
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF H+
Sbjct: 129 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 242
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 243 --------------PPICTIDVYMIMRKCWMIDADSRPKF 268
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 130
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF H+
Sbjct: 131 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 186
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 244
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 245 --------------PPICTIDVYMIMVKCWMIDADSRPKF 270
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 128
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF H+
Sbjct: 129 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 242
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 243 --------------PPICTIDVYMIMVKCWMIDADSRPKF 268
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++ G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 133
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 134 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 247
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 248 --------------PPICTIDVYMIMVKCWMIDADSRPKF 273
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++ G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 126
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 127 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 240
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 241 --------------PPICTIDVYMIMVKCWMIDADSRPKF 266
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AI +L +++P+ + + V++ +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 109 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 160
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF L H+
Sbjct: 161 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 216
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 274
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 275 --------------PPICTIDVYMIMVKCWMIDADSRPKF 300
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 105/203 (51%), Gaps = 20/203 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTP-AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
+G+G++G+V+ A+ + + AA K +DT S E E D+ ++ +++ H + V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE-DYMVEIDILASCDHPNIVKLLDAF 103
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
NN ++ +F G++ V+ ++ P LT +Q V L +LH+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVM-----LELERP---LTESQIQVVCKQTLDALNYLHDN- 154
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG 254
I+HRD+++ N+L D K+ADF ++ +++ T R S +GT + APE M
Sbjct: 155 --KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS--FIGTPYWMAPEVVMCE 210
Query: 255 Q-----ITQKSDVYSFGVVLLEL 272
K+DV+S G+ L+E+
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEM 233
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 128
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF H+
Sbjct: 129 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 242
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 243 --------------PPICTIDVYMIMRKCWMIDADSRPKF 268
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 126
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF H+
Sbjct: 127 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 182
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 240
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 241 --------------PPICTIDVYMIMVKCWMIDADSRPKF 266
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 31/284 (10%)
Query: 76 IGEGSYGRVFYAKLT----DGTP--AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G G++G V+ +++ D +P A+K L + + E DF + ++S+ H++ V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
+G ++S R ++ + G L L + + ++P L + VA A G ++
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLLHVARDIACGCQY 147
Query: 190 LHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
L E +HRD+ + N LL +KI DF + + + +
Sbjct: 148 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 204
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQ 305
PE M G T K+D +SFGV+L E+ + G P K Q ++ + T D K
Sbjct: 205 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFVTSGGRMDPPKN 261
Query: 306 CVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
C P C Q++ + RPN I+++ ++
Sbjct: 262 CPGPVYR-------------IMTQCWQHQPEDRPNFAIILERIE 292
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 68 SNFGTKALIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ F ++G G++G V+ + +G P AIK+L +++P+ + + V++ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ H LLG C+ S + L+ Q G L D + K G++ +L W ++
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQI----- 133
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+ +L ++ +VHRD+ + NVL+ KI DF H+
Sbjct: 134 -AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 189
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ A E + T +SDV+S+GV + EL+T G KP D +P + S + RL +
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ- 247
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNM 341
PP C +AD RP
Sbjct: 248 --------------PPICTIDVYMIMVKCWMIDADSRPKF 273
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 31/284 (10%)
Query: 76 IGEGSYGRVFYAKLT----DGTP--AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G G++G V+ +++ D +P A+K L + + E DF + ++S+ H++ V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
+G ++S R ++ + G L L + + ++P L + VA A G ++
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLLHVARDIACGCQY 170
Query: 190 LHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
L E +HRD+ + N LL +KI DF + + + +
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQ 305
PE M G T K+D +SFGV+L E+ + G P K Q ++ + T D K
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFVTSGGRMDPPKN 284
Query: 306 CVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
C P C Q++ + RPN I+++ ++
Sbjct: 285 CPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 31/284 (10%)
Query: 76 IGEGSYGRVFYAKLT----DGTP--AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G G++G V+ +++ D +P A+K L + + E DF + ++S+ H++ V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
+G ++S R ++ + G L L + + ++P L + VA A G ++
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLLHVARDIACGCQY 155
Query: 190 LHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
L E +HRD+ + N LL +KI DF + + + +
Sbjct: 156 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQ 305
PE M G T K+D +SFGV+L E+ + G P K Q ++ + T D K
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFVTSGGRMDPPKN 269
Query: 306 CVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
C P C Q++ + RPN I+++ ++
Sbjct: 270 CPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 31/284 (10%)
Query: 76 IGEGSYGRVFYAKLT----DGTP--AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G G++G V+ +++ D +P A+K L + + E DF + ++S+ H++ V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
+G ++S R ++ + G L L + + ++P L + VA A G ++
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLLHVARDIACGCQY 155
Query: 190 LHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
L E +HRD+ + N LL +KI DF + + + +
Sbjct: 156 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQ 305
PE M G T K+D +SFGV+L E+ + G P K Q ++ + T D K
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFVTSGGRMDPPKN 269
Query: 306 CVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
C P C Q++ + RPN I+++ ++
Sbjct: 270 CPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 31/284 (10%)
Query: 76 IGEGSYGRVFYAKLT----DGTP--AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G G++G V+ +++ D +P A+K L + + E DF + ++S+ H++ V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
+G ++S R ++ + G L L + + ++P L + VA A G ++
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLLHVARDIACGCQY 156
Query: 190 LHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
L E +HRD+ + N LL +KI DF + + + +
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWM 213
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQ 305
PE M G T K+D +SFGV+L E+ + G P K Q ++ + T D K
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFVTSGGRMDPPKN 270
Query: 306 CVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
C P C Q++ + RPN I+++ ++
Sbjct: 271 CPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 31/284 (10%)
Query: 76 IGEGSYGRVFYAKLT----DGTP--AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G G++G V+ +++ D +P A+K L + + E DF + ++S+ H++ V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
+G ++S R ++ + G L L + + ++P L + VA A G ++
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLLHVARDIACGCQY 156
Query: 190 LHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
L E +HRD+ + N LL +KI DF + + + +
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQ 305
PE M G T K+D +SFGV+L E+ + G P K Q ++ + T D K
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFVTSGGRMDPPKN 270
Query: 306 CVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
C P C Q++ + RPN I+++ ++
Sbjct: 271 CPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 31/284 (10%)
Query: 76 IGEGSYGRVFYAKLT----DGTP--AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G G++G V+ +++ D +P A+K L + + E DF + ++S+ H++ V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
+G ++S R ++ + G L L + + ++P L + VA A G ++
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPSS-LAMLDLLHVARDIACGCQY 162
Query: 190 LHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
L E +HRD+ + N LL +KI DF + + + +
Sbjct: 163 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 219
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQ 305
PE M G T K+D +SFGV+L E+ + G P K Q ++ + T D K
Sbjct: 220 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFVTSGGRMDPPKN 276
Query: 306 CVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
C P C Q++ + RPN I+++ ++
Sbjct: 277 CPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 31/284 (10%)
Query: 76 IGEGSYGRVFYAKLT----DGTP--AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G G++G V+ +++ D +P A+K L + + E DF + ++S+ H++ V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
+G ++S R ++ + G L L + + ++P L + VA A G ++
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLLHVARDIACGCQY 172
Query: 190 LHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
L E +HRD+ + N LL +KI DF + + + +
Sbjct: 173 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 229
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQ 305
PE M G T K+D +SFGV+L E+ + G P K Q ++ + T D K
Sbjct: 230 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFVTSGGRMDPPKN 286
Query: 306 CVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
C P C Q++ + RPN I+++ ++
Sbjct: 287 CPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 76 IGEGSYGRVFYAKLT-DGTPAAIKKLDTSSAPEPESDFAA-QLSVVSRLKHEHFVELLGY 133
IGEGS+G+ K T DG IK+++ S E + + +++V++ +KH + V+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E+ + +V + G L ++ +KGV E +L W ++ +A L+ +H++
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQE-DQILDWFVQICLA------LKHVHDR 144
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I+HRD++S N+ L D ++ DF + + T + +GT Y +PE
Sbjct: 145 ---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC--IGTPYYLSPEICEN 199
Query: 254 GQITQKSDVYSFGVVLLELLT 274
KSD+++ G VL EL T
Sbjct: 200 KPYNNKSDIWALGCVLYELCT 220
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 120/284 (42%), Gaps = 31/284 (10%)
Query: 76 IGEGSYGRVFYAKLT----DGTP--AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G G++G V+ +++ D +P A+K L + + E DF + ++S+ H++ V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
+G ++S R ++ + G L L + + ++P L + VA A G ++
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLLHVARDIACGCQY 173
Query: 190 LHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
L E +HRD+ + N LL +KI DF + + +
Sbjct: 174 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 230
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQ 305
PE M G T K+D +SFGV+L E+ + G P K Q ++ + T D K
Sbjct: 231 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFVTSGGRMDPPKN 287
Query: 306 CVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
C P C Q++ + RPN I+++ ++
Sbjct: 288 CPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 17/235 (7%)
Query: 52 PIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYA------KLTDGTPAAIKKLDTSSA 105
P ++P + E R FG +G G++G+V A K A+K L +++
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 106 PEPESDFAAQLSVVSRL-KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQG 164
+ + ++L ++S L +HE+ V LLG C +++ ++ G L + L + V
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLE 149
Query: 165 AEPG-----PVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIA 219
+P L+ + + A+G+ FL K +HRDV + NVLL + +KI
Sbjct: 150 TDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIG 206
Query: 220 DFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
DF L + + + + APE T +SDV+S+G++L E+ +
Sbjct: 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 18/212 (8%)
Query: 75 LIGEGSYGRVFYA-KLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
++G G++G V+ + DG P AIK L +++P+ + + V++ + +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LLG C+ S + LV Q G L D + +G G++ +L W ++ AKG+ +
Sbjct: 84 LLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQD--LLNWCMQI------AKGMSY 134
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPE 249
L E V+ +VHRD+ + NVL+ KI DF L H+ + A E
Sbjct: 135 L-EDVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 250 YAMTGQITQKSDVYSFGVVLLELLT-GRKPVD 280
+ + T +SDV+S+GV + EL+T G KP D
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 120/284 (42%), Gaps = 31/284 (10%)
Query: 76 IGEGSYGRVFYAKLT----DGTP--AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G G++G V+ +++ D +P A+K L + + E DF + ++S+ H++ V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
+G ++S R ++ + G L L + + ++P L + VA A G ++
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLLHVARDIACGCQY 196
Query: 190 LHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
L E +HRD+ + N LL +KI DF + + +
Sbjct: 197 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 253
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQ 305
PE M G T K+D +SFGV+L E+ + G P K Q ++ + T D K
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFVTSGGRMDPPKN 310
Query: 306 CVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
C P C Q++ + RPN I+++ ++
Sbjct: 311 CPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V+ + T A+K L + F + +++ L+H+ V L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSV--QAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
++ ++ GSL D L +G G VL + + + A+G+ ++ K
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEG------GKVLL-PKLIDFSAQIAEGMAYIERK-- 129
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
+HRD+R++NVL+ + KIADF L D ++ R F + APE
Sbjct: 130 -NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEAINF 185
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKP 278
G T KSDV+SFG++L E++T G+ P
Sbjct: 186 GCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 31/284 (10%)
Query: 76 IGEGSYGRVFYAKLT----DGTP--AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G G++G V+ +++ D +P A+K L + + E DF + ++S+ H++ V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
+G ++S R ++ + G L L + + ++P L + VA A G ++
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPSS-LAMLDLLHVARDIACGCQY 182
Query: 190 LHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
L E +HRD+ + N LL +KI DF + + + +
Sbjct: 183 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 239
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQ 305
PE M G T K+D +SFGV+L E+ + G P K Q ++ + T D K
Sbjct: 240 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFVTSGGRMDPPKN 296
Query: 306 CVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
C P C Q++ + RPN I+++ ++
Sbjct: 297 CPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 31/284 (10%)
Query: 76 IGEGSYGRVFYAKLT----DGTP--AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+G G++G V+ +++ D +P A+K L + + E DF + ++S+ H++ V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
+G ++S R ++ + G L L + + ++P L + VA A G ++
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLLHVARDIACGCQY 170
Query: 190 LHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
L E +HRD+ + N LL +KI DF + + + +
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQ 305
PE M G T K+D +SFGV+L E+ + G P K Q ++ + T D K
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFVTSGGRMDPPKN 284
Query: 306 CVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
C P C Q++ + RPN I+++ ++
Sbjct: 285 CPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V+ + T A+K L + F + +++ L+H+ V L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSV--QAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ ++ +F GSL D L +G G VL + + + A+G+ ++ K
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEG------GKVLL-PKLIDFSAQIAEGMAYIERK-- 128
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
+HRD+R++NVL+ + KIADF L D ++ R F + APE
Sbjct: 129 -NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEAINF 184
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKP 278
G T KS+V+SFG++L E++T G+ P
Sbjct: 185 GCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 17/205 (8%)
Query: 75 LIGEGSYGRVFY-AKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
++G G +G V + +G P IK ++ S + + + L H H V
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LLG C S+ + LV Q+ +GSL D + +G G P +L W ++ AKG+ +
Sbjct: 98 LLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALG--PQLLLNWGVQI------AKGMYY 148
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPE 249
L E +VHR++ + NVLL + ++ADF + + +L + + A E
Sbjct: 149 LEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 205
Query: 250 YAMTGQITQKSDVYSFGVVLLELLT 274
G+ T +SDV+S+GV + EL+T
Sbjct: 206 SIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 75 LIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V +L P AIK L + DF + S++ + H + + L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 131 LGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFL 190
G +S ++V ++ GSL L G T Q V + G + G+++L
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDG--------QFTVIQLVGMLRGISAGMKYL 140
Query: 191 HEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT-FGYHAPE 249
+ VHRD+ + N+L+ + K++DF L+ D ++TR + APE
Sbjct: 141 SDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPE 197
Query: 250 YAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ T SDV+S+G+V+ E+++ G +P
Sbjct: 198 AIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 110/235 (46%), Gaps = 17/235 (7%)
Query: 52 PIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYA------KLTDGTPAAIKKLDTSSA 105
P ++P + E R FG +G G++G+V A K A+K L +++
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 106 PEPESDFAAQLSVVSRL-KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQG 164
+ + ++L ++S L +HE+ V LLG C +++ ++ G L + L + V
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLE 149
Query: 165 AEPGPVL---TWNQRVKVAYGA--AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIA 219
+P + T + R + + + A+G+ FL K +HRDV + NVLL + +KI
Sbjct: 150 TDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIG 206
Query: 220 DFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
DF L + + + + APE T +SDV+S+G++L E+ +
Sbjct: 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 76 IGEGSYGRV---FYAKLTD--GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D G A+KKL S+ E DF ++ ++ L+H++ V+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKY 75
Query: 131 LGYCMESNNR--ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + R L+ ++ GSL D L K + + +L + ++ KG+E
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGME 127
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ--SSDTAARLHSTRVLGTFGYH 246
+L K +HRD+ + N+L+ ++ + KI DF LT ++ F Y
Sbjct: 128 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY- 183
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE + + SDV+SFGVVL EL T
Sbjct: 184 APESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 13/231 (5%)
Query: 52 PIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYA------KLTDGTPAAIKKLDTSSA 105
P ++P + E R FG +G G++G+V A K A+K L +++
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 106 PEPESDFAAQLSVVSRL-KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQ- 163
+ + ++L ++S L +HE+ V LLG C +++ ++ G L + L +
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL 149
Query: 164 GAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNL 223
E G L + + A+G+ FL K +HRDV + NVLL + +KI DF L
Sbjct: 150 DKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGL 206
Query: 224 TNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ + + + APE T +SDV+S+G++L E+ +
Sbjct: 207 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 104/203 (51%), Gaps = 20/203 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTP-AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
+G+G++G+V+ A+ + + AA K +DT S E E D+ ++ +++ H + V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE-DYMVEIDILASCDHPNIVKLLDAF 103
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
NN ++ +F G++ V+ ++ P LT +Q V L +LH+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVM-----LELERP---LTESQIQVVCKQTLDALNYLHDN- 154
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG 254
I+HRD+++ N+L D K+ADF ++ +++ R S +GT + APE M
Sbjct: 155 --KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDS--FIGTPYWMAPEVVMCE 210
Query: 255 Q-----ITQKSDVYSFGVVLLEL 272
K+DV+S G+ L+E+
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEM 233
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 76 IGEGSYGRV---FYAKLTD--GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D G A+KKL S+ E DF ++ ++ L+H++ V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKY 76
Query: 131 LGYCMESNNR--ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + R L+ ++ GSL D L K + + +L + ++ KG+E
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGME 128
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ--SSDTAARLHSTRVLGTFGYH 246
+L K +HRD+ + N+L+ ++ + KI DF LT ++ F Y
Sbjct: 129 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY- 184
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE + + SDV+SFGVVL EL T
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 13/231 (5%)
Query: 52 PIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYA------KLTDGTPAAIKKLDTSSA 105
P ++P + E R FG +G G++G+V A K A+K L +++
Sbjct: 24 PTQLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 81
Query: 106 PEPESDFAAQLSVVSRL-KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQ- 163
+ + ++L ++S L +HE+ V LLG C +++ ++ G L + L +
Sbjct: 82 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL 141
Query: 164 GAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNL 223
E G L + + A+G+ FL K +HRDV + NVLL + +KI DF L
Sbjct: 142 DKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGL 198
Query: 224 TNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ + + + APE T +SDV+S+G++L E+ +
Sbjct: 199 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 76 IGEGSYGRV---FYAKLTD--GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D G A+KKL S+ E DF ++ ++ L+H++ V+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKY 80
Query: 131 LGYCMESNNR--ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + R L+ ++ GSL D L K + + +L + ++ KG+E
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGME 132
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ--SSDTAARLHSTRVLGTFGYH 246
+L K +HRD+ + N+L+ ++ + KI DF LT ++ F Y
Sbjct: 133 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY- 188
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE + + SDV+SFGVVL EL T
Sbjct: 189 APESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 76 IGEGSYGRV---FYAKLTD--GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D G A+KKL S+ E DF ++ ++ L+H++ V+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKY 74
Query: 131 LGYCMESNNR--ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + R L+ ++ GSL D L K + + +L + ++ KG+E
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGME 126
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ--SSDTAARLHSTRVLGTFGYH 246
+L K +HRD+ + N+L+ ++ + KI DF LT ++ F Y
Sbjct: 127 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY- 182
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE + + SDV+SFGVVL EL T
Sbjct: 183 APESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 76 IGEGSYGRV---FYAKLTD--GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D G A+KKL S+ E DF ++ ++ L+H++ V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKY 94
Query: 131 LGYCMESNNR--ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + R L+ ++ GSL D L K + + +L + ++ KG+E
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGME 146
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ--SSDTAARLHSTRVLGTFGYH 246
+L K +HRD+ + N+L+ ++ + KI DF LT ++ F Y
Sbjct: 147 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY- 202
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE + + SDV+SFGVVL EL T
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 76 IGEGSYGRV---FYAKLTD--GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D G A+KKL S+ E DF ++ ++ L+H++ V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKY 79
Query: 131 LGYCMESNNR--ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + R L+ ++ GSL D L K + + +L + ++ KG+E
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGME 131
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ--SSDTAARLHSTRVLGTFGYH 246
+L K +HRD+ + N+L+ ++ + KI DF LT ++ F Y
Sbjct: 132 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY- 187
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE + + SDV+SFGVVL EL T
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 17/205 (8%)
Query: 75 LIGEGSYGRVFY-AKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE 129
++G G +G V + +G P IK ++ S + + + L H H V
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LLG C S+ + LV Q+ +GSL D + +G G P +L W ++ AKG+ +
Sbjct: 80 LLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALG--PQLLLNWGVQI------AKGMYY 130
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPE 249
L E +VHR++ + NVLL + ++ADF + + +L + + A E
Sbjct: 131 LEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 187
Query: 250 YAMTGQITQKSDVYSFGVVLLELLT 274
G+ T +SDV+S+GV + EL+T
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 76 IGEGSYGRV---FYAKLTD--GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D G A+KKL S+ E DF ++ ++ L+H++ V+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKY 107
Query: 131 LGYCMESNNR--ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + R L+ ++ GSL D L K + + +L + ++ KG+E
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGME 159
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ--SSDTAARLHSTRVLGTFGYH 246
+L K +HRD+ + N+L+ ++ + KI DF LT ++ F Y
Sbjct: 160 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY- 215
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE + + SDV+SFGVVL EL T
Sbjct: 216 APESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 76 IGEGSYGRV---FYAKLTD--GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D G A+KKL S+ E DF ++ ++ L+H++ V+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKY 83
Query: 131 LGYCMESNNR--ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + R L+ ++ GSL D L K + + +L + ++ KG+E
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGME 135
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ--SSDTAARLHSTRVLGTFGYH 246
+L K +HRD+ + N+L+ ++ + KI DF LT ++ F Y
Sbjct: 136 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY- 191
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE + + SDV+SFGVVL EL T
Sbjct: 192 APESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 76 IGEGSYGRV---FYAKLTD--GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D G A+KKL S+ E DF ++ ++ L+H++ V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKY 94
Query: 131 LGYCMESNNR--ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + R L+ ++ GSL D L K + + +L + ++ KG+E
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGME 146
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ--SSDTAARLHSTRVLGTFGYH 246
+L K +HRD+ + N+L+ ++ + KI DF LT ++ F Y
Sbjct: 147 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY- 202
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE + + SDV+SFGVVL EL T
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 115/245 (46%), Gaps = 22/245 (8%)
Query: 76 IGEGSYGRVFYAKLTDGTP--AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
IG+GS+G V Y + + T AIK +D A + D +++V+S+ + G
Sbjct: 27 IGKGSFGEV-YKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
++S ++ ++ GS D+L +PGP L + KGL++LH +
Sbjct: 86 YLKSTKLWIIMEYLGGGSALDLL---------KPGP-LEETYIATILREILKGLDYLHSE 135
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
+ +HRD++++NVLL + K+ADF + Q +DT ++ +GT + APE
Sbjct: 136 RK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDT--QIKRNXFVGTPFWMAPEVIKQ 190
Query: 254 GQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDK----VKQCVDP 309
K+D++S G+ +EL G P P L+ +P E + K+ V+
Sbjct: 191 SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEA 250
Query: 310 KLNND 314
LN D
Sbjct: 251 CLNKD 255
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 76 IGEGSYGRV---FYAKLTD--GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D G A+KKL S+ E DF ++ ++ L+H++ V+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKY 81
Query: 131 LGYCMESNNR--ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + R L+ ++ GSL D L K + + +L + ++ KG+E
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGME 133
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ--SSDTAARLHSTRVLGTFGYH 246
+L K +HRD+ + N+L+ ++ + KI DF LT ++ F Y
Sbjct: 134 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY- 189
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE + + SDV+SFGVVL EL T
Sbjct: 190 APESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 76 IGEGSYGRV---FYAKLTD--GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D G A+KKL S+ E DF ++ ++ L+H++ V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKY 76
Query: 131 LGYCMESNNR--ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + R L+ ++ GSL D L K + + +L + ++ KG+E
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGME 128
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ--SSDTAARLHSTRVLGTFGYH 246
+L K +HRD+ + N+L+ ++ + KI DF LT ++ F Y
Sbjct: 129 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY- 184
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE + + SDV+SFGVVL EL T
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 76 IGEGSYGRV---FYAKLTD--GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D G A+KKL S+ E DF ++ ++ L+H++ V+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKY 82
Query: 131 LGYCMESNNR--ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + R L+ ++ GSL D L K + + +L + ++ KG+E
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGME 134
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ--SSDTAARLHSTRVLGTFGYH 246
+L K +HRD+ + N+L+ ++ + KI DF LT ++ F Y
Sbjct: 135 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY- 190
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE + + SDV+SFGVVL EL T
Sbjct: 191 APESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 130/322 (40%), Gaps = 55/322 (17%)
Query: 45 GTPQKALPIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKL 100
G+ + A I++ +K++E+ IG G +G V +L + AIK L
Sbjct: 3 GSMEFAKEIDVSYVKIEEV------------IGAGEFGEVCRGRLKAPGKKESCVAIKTL 50
Query: 101 DTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRK 160
+F ++ S++ + +H + + L G S +++ +F G+L L
Sbjct: 51 KGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLND 110
Query: 161 GVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIAD 220
G T Q V + G A G+ +L E VHRD+ + N+L+ + K++D
Sbjct: 111 GQ--------FTVIQLVGMLRGIASGMRYLAEM---SYVHRDLAARNILVNSNLVCKVSD 159
Query: 221 FNLTNQSSDTAARLHSTRVLGT---FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GR 276
F L+ + ++ T LG + APE + T SD +S+G+V+ E+++ G
Sbjct: 160 FGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGE 219
Query: 277 KPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDY----PPXXXXXXXXXXXXCVQ 332
+P W D Q V + DY PP C Q
Sbjct: 220 RPY-------------W-------DMSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQ 259
Query: 333 YEADFRPNMTIVVKALQPLLNS 354
+ + RP VV AL ++ +
Sbjct: 260 KDRNARPRFPQVVSALDKMIRN 281
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 117/289 (40%), Gaps = 34/289 (11%)
Query: 73 KALIGEGSYGRVFYAKLTDGT-----PAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
+ +IG G +G V+ L + P AIK L + DF + ++ + H +
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 128 VELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+ L G + +++ ++ G+L L + G VL Q V + G A G+
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDG-----EFSVL---QLVGMLRGIAAGM 160
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT-FGYH 246
++L VHRD+ + N+L+ + K++DF L+ D ++T +
Sbjct: 161 KYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT 217
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQ 305
APE + T SDV+SFG+V+ E++T G +P W LS +V +
Sbjct: 218 APEAISYRKFTSASDVWSFGIVMWEVMTYGERPY-------------W---ELSNHEVMK 261
Query: 306 CVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
++ P C Q E RP +V L L+ +
Sbjct: 262 AINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 22/208 (10%)
Query: 76 IGEGSYGRV---FYAKLTD--GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D G A+KKL S+ E DF ++ ++ L+H++ V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKY 76
Query: 131 LGYCMESNNR--ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + R L+ ++ GSL D L K + + +L + ++ KG+E
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGME 128
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT--FGYH 246
+L K +HRD+ + N+L+ ++ + KI DF LT + + G ++
Sbjct: 129 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLT-KVLPQDKEFFKVKEPGESPIFWY 184
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE + + SDV+SFGVVL EL T
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 76 IGEGSYGRV---FYAKLTD--GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D G A+KKL S+ E DF ++ ++ L+H++ V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKY 79
Query: 131 LGYCMESNNR--ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + R L+ +F GSL + L K + + +L + ++ KG+E
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHK--ERIDHIKLLQYTSQI------CKGME 131
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ--SSDTAARLHSTRVLGTFGYH 246
+L K +HRD+ + N+L+ ++ + KI DF LT ++ F Y
Sbjct: 132 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY- 187
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE + + SDV+SFGVVL EL T
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 98/222 (44%), Gaps = 40/222 (18%)
Query: 75 LIGEGSYGRVFYAKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V++ L D A+K L+ + S F + ++ H + + L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 131 LGYCMESNNR-ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVK--VAYG--AAK 185
LG C+ S ++V + G L + + T N VK + +G AK
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE------------THNPTVKDLIGFGLQVAK 203
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSD---------TAARLHS 236
G++FL K VHRD+ + N +L + F K+ADF L D T A+L
Sbjct: 204 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL-- 258
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ A E T + T KSDV+SFGV+L EL+T P
Sbjct: 259 -----PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 118/292 (40%), Gaps = 43/292 (14%)
Query: 75 LIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V +L + AIK L +F ++ S++ + +H + + L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 131 LGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFL 190
G S +++ +F G+L L G T Q V + G A G+ +L
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQ--------FTVIQLVGMLRGIASGMRYL 134
Query: 191 HEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT---FGYHA 247
E VHRD+ + N+L+ + K++DF L+ + ++ T LG + A
Sbjct: 135 AEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 248 PEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQC 306
PE + T SD +S+G+V+ E+++ G +P W D Q
Sbjct: 192 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY-------------W-------DMSNQD 231
Query: 307 VDPKLNNDY----PPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
V + DY PP C Q + + RP VV AL ++ +
Sbjct: 232 VINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN 283
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 117/293 (39%), Gaps = 33/293 (11%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
+N ++G G +G V +L AIK L + DF + S++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + + L G +S ++V ++ GSL L T Q V + G
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGI 156
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT- 242
A G+++L + VHRD+ + N+L+ + K++DF L+ D ++TR
Sbjct: 157 ASGMKYLSDM---GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ +PE + T SDV+S+G+VL E+++ G +P W +S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W---EMSNQ 257
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
V + VD P C Q + + RP +V L L+ +
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 75 LIGEGSYGRVFYAKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V++ L D A+K L+ + S F + ++ H + + L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 131 LGYCMESNNR-ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LG C+ S ++V + G L R ++ P T + AKG++F
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNP--TVKDLIGFGLQVAKGMKF 153
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSD---------TAARLHSTRVL 240
L K VHRD+ + N +L + F K+ADF L D T A+L
Sbjct: 154 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL------ 204
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ A E T + T KSDV+SFGV+L EL+T P
Sbjct: 205 -PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
+G+G++G+V+ AK + G AA K ++T S E E D+ ++ +++ H + V+LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE-DYIVEIEILATCDHPYIVKLLGAY 77
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
++ +F G++ ++ E LT Q V + L FLH K
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIM--------LELDRGLTEPQIQVVCRQMLEALNFLHSK- 128
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG 254
I+HRD+++ NVL+ + ++ADF ++ ++ T + S +GT + APE M
Sbjct: 129 --RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCE 184
Query: 255 QITQ-----KSDVYSFGVVLLEL 272
+ K+D++S G+ L+E+
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEM 207
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 75 LIGEGSYGRVFYAKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V++ L D A+K L+ + S F + ++ H + + L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 131 LGYCMESNNR-ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LG C+ S ++V + G L R ++ P T + AKG++F
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNP--TVKDLIGFGLQVAKGMKF 149
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSD---------TAARLHSTRVL 240
L K VHRD+ + N +L + F K+ADF L D T A+L
Sbjct: 150 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL------ 200
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ A E T + T KSDV+SFGV+L EL+T P
Sbjct: 201 -PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 75 LIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V L AIK L + + DF ++ S++ + H + + L
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 99
Query: 131 LGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFL 190
G +S +++ +F GSL L G T Q V + G A G+++L
Sbjct: 100 EGVVTKSTPVMIITEFMENGSLDSFLRQNDG--------QFTVIQLVGMLRGIAAGMKYL 151
Query: 191 HEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT---FGYHA 247
+ VHRD+ + N+L+ + K++DF L+ D + T LG + A
Sbjct: 152 ADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 208
Query: 248 PEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
PE + T SDV+S+G+V+ E+++ G +P
Sbjct: 209 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 21/238 (8%)
Query: 52 PIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYA------KLTDGTPAAIKKLDTSSA 105
P ++P + E R FG +G G++G+V A K A+K L +++
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 106 PEPESDFAAQLSVVSRL-KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQG 164
+ + ++L ++S L +HE+ V LLG C +++ ++ G L + L RK G
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR-RKRPPG 148
Query: 165 AE--------PGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS 216
E P L+ + + A+G+ FL K +HRDV + NVLL + +
Sbjct: 149 LEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVA 205
Query: 217 KIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
KI DF L + + + + APE T +SDV+S+G++L E+ +
Sbjct: 206 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 75 LIGEGSYGRVFYAKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V++ L D A+K L+ + S F + ++ H + + L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 131 LGYCMESNNR-ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LG C+ S ++V + G L R ++ P T + AKG++F
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNP--TVKDLIGFGLQVAKGMKF 146
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSD---------TAARLHSTRVL 240
L K VHRD+ + N +L + F K+ADF L D T A+L
Sbjct: 147 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL------ 197
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ A E T + T KSDV+SFGV+L EL+T P
Sbjct: 198 -PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 75 LIGEGSYGRVFYAKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V++ L D A+K L+ + S F + ++ H + + L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 131 LGYCMESNNR-ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LG C+ S ++V + G L R ++ P T + AKG++F
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNP--TVKDLIGFGLQVAKGMKF 148
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSD---------TAARLHSTRVL 240
L K VHRD+ + N +L + F K+ADF L D T A+L
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL------ 199
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ A E T + T KSDV+SFGV+L EL+T P
Sbjct: 200 -PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 75 LIGEGSYGRVFYAKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V++ L D A+K L+ + S F + ++ H + + L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 131 LGYCMESNNR-ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LG C+ S ++V + G L R ++ P T + AKG++F
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNP--TVKDLIGFGLQVAKGMKF 148
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSD---------TAARLHSTRVL 240
L K VHRD+ + N +L + F K+ADF L D T A+L
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL------ 199
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ A E T + T KSDV+SFGV+L EL+T P
Sbjct: 200 -PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
+G+G++G+V+ AK + G AA K ++T S E E D+ ++ +++ H + V+LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE-DYIVEIEILATCDHPYIVKLLGAY 85
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
++ +F G++ ++ E LT Q V + L FLH K
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIM--------LELDRGLTEPQIQVVCRQMLEALNFLHSK- 136
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG 254
I+HRD+++ NVL+ + ++ADF ++ ++ T + S +GT + APE M
Sbjct: 137 --RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCE 192
Query: 255 QITQ-----KSDVYSFGVVLLEL 272
+ K+D++S G+ L+E+
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEM 215
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 75 LIGEGSYGRVFYAKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V++ L D A+K L+ + S F + ++ H + + L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 131 LGYCMESNNR-ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LG C+ S ++V + G L R ++ P T + AKG++F
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNP--TVKDLIGFGLQVAKGMKF 149
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSD---------TAARLHSTRVL 240
L K VHRD+ + N +L + F K+ADF L D T A+L
Sbjct: 150 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKL------ 200
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ A E T + T KSDV+SFGV+L EL+T P
Sbjct: 201 -PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 25/221 (11%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
S + +IG G G V Y +L P AIK L DF ++ S++ +
Sbjct: 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD 108
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + + L G ++V ++ GSL L G T Q V + G
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG--------QFTIMQLVGMLRGV 160
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
G+ +L + VHRD+ + NVL+ + K++DF L+ D ++T T
Sbjct: 161 GAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT----TG 213
Query: 244 G-----YHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
G + APE + SDV+SFGVV+ E+L G +P
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTP-AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
+G+G++G+V+ A+ + + AA K +DT S E E D+ ++ +++ H + V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE-DYMVEIDILASCDHPNIVKLLDAF 103
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
NN ++ +F G++ V+ ++ P LT +Q V L +LH+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVM-----LELERP---LTESQIQVVCKQTLDALNYLHDN- 154
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG 254
I+HRD+++ N+L D K+ADF ++ +++ R +GT + APE M
Sbjct: 155 --KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR--RDXFIGTPYWMAPEVVMCE 210
Query: 255 Q-----ITQKSDVYSFGVVLLEL 272
K+DV+S G+ L+E+
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEM 233
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 126/309 (40%), Gaps = 35/309 (11%)
Query: 58 IKLDELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAA 114
+ LD+ ++ K +G G YG V+ + K + K DT E F
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLK 56
Query: 115 QLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWN 174
+ +V+ +KH + V+LLG C ++ +F T G+L D L R+ + VL +
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLY- 113
Query: 175 QRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARL 234
+A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ +
Sbjct: 114 ----MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTA 166
Query: 235 HSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTW 293
H+ + APE + + KSDV++FGV+L E+ T G P
Sbjct: 167 HAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-------------- 211
Query: 294 ATPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLN 353
P + +V + ++ + P C Q+ RP+ + +A + +
Sbjct: 212 --PGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 269
Query: 354 SKPAGPEAQ 362
E +
Sbjct: 270 ESSISDEVE 278
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 17/217 (7%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
+N ++G G +G V +L AIK L + DF + S++ +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + + L G +S ++V ++ GSL L T Q V + G
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGI 127
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT- 242
A G+++L + VHRD+ + N+L+ + K++DF L+ D ++TR
Sbjct: 128 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ +PE + T SDV+S+G+VL E+++ G +P
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 17/217 (7%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
+N ++G G +G V +L AIK L + DF + S++ +
Sbjct: 33 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 92
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + + L G +S ++V ++ GSL L T Q V + G
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGI 144
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT- 242
A G+++L + VHRD+ + N+L+ + K++DF L+ D ++TR
Sbjct: 145 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 201
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ +PE + T SDV+S+G+VL E+++ G +P
Sbjct: 202 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 76 IGEGSYGRV---FYAKLTD--GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D G A+KKL S+ E DF ++ ++ L+H++ V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKY 79
Query: 131 LGYCMESNNR--ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + R L+ ++ GSL D L + + +L + ++ KG+E
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAH--AERIDHIKLLQYTSQI------CKGME 131
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ--SSDTAARLHSTRVLGTFGYH 246
+L K +HRD+ + N+L+ ++ + KI DF LT ++ F Y
Sbjct: 132 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY- 187
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE + + SDV+SFGVVL EL T
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 117/293 (39%), Gaps = 33/293 (11%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
+N ++G G +G V +L AIK L + DF + S++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + + L G +S ++V ++ GSL L T Q V + G
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGI 156
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT- 242
A G+++L + VHRD+ + N+L+ + K++DF L+ D ++TR
Sbjct: 157 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ +PE + T SDV+S+G+VL E+++ G +P W +S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W---EMSNQ 257
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
V + VD P C Q + + RP +V L L+ +
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 103/229 (44%), Gaps = 16/229 (6%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHE 125
+F L+G+GS+ V+ A+ + G AIK +D + + ++ + +LKH
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAK 185
+EL Y +SN LV + G ++ L R +P + N+ +
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR-----VKP---FSENEARHFMHQIIT 123
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
G+ +LH I+HRD+ SN+LL + KIADF L Q + H T + GT Y
Sbjct: 124 GMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK-HYT-LCGTPNY 178
Query: 246 HAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWA 294
+PE A +SDV+S G + LL GR P D K + V A
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 117/293 (39%), Gaps = 33/293 (11%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
+N ++G G +G V +L AIK L + DF + S++ +
Sbjct: 43 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 102
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + + L G +S ++V ++ GSL L T Q V + G
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGI 154
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT- 242
A G+++L + VHRD+ + N+L+ + K++DF L+ D ++TR
Sbjct: 155 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 211
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ +PE + T SDV+S+G+VL E+++ G +P W +S
Sbjct: 212 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W---EMSNQ 255
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
V + VD P C Q + + RP +V L L+ +
Sbjct: 256 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 308
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 117/293 (39%), Gaps = 33/293 (11%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
+N ++G G +G V +L AIK L + DF + S++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + + L G +S ++V ++ GSL L T Q V + G
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGI 156
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT- 242
A G+++L + VHRD+ + N+L+ + K++DF L+ D ++TR
Sbjct: 157 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ +PE + T SDV+S+G+VL E+++ G +P W +S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W---EMSNQ 257
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
V + VD P C Q + + RP +V L L+ +
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 33/243 (13%)
Query: 57 QIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTP------AAIKKLDTSSAPEPES 110
Q KL E++ F + +GE +G+V+ L P AIK L +
Sbjct: 17 QAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE 74
Query: 111 DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGR----------- 159
+F + + +RL+H + V LLG + +++ + + G LH+ L R
Sbjct: 75 EFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 134
Query: 160 -KGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKI 218
+ V+ A P V + A G+E+L +VH+D+ + NVL++D KI
Sbjct: 135 DRTVKSALEPPDF-----VHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKI 186
Query: 219 ADFNLTNQ--SSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-G 275
+D L + ++D L ++ L + APE M G+ + SD++S+GVVL E+ + G
Sbjct: 187 SDLGLFREVYAADYYKLLGNS--LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYG 244
Query: 276 RKP 278
+P
Sbjct: 245 LQP 247
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 124/305 (40%), Gaps = 35/305 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQL 116
LD+ ++ K +G G YG V+ + K + K DT E F +
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEA 58
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
+V+ +KH + V+LLG C ++ +F T G+L D L R+ + VL
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVL----- 111
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
+ +A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ + H+
Sbjct: 112 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 168
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWAT 295
+ APE + + KSDV++FGV+L E+ T G P
Sbjct: 169 GAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------- 211
Query: 296 PRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSK 355
P + +V + ++ + P C Q+ RP+ + +A + +
Sbjct: 212 PGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271
Query: 356 PAGPE 360
E
Sbjct: 272 SISDE 276
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 117/293 (39%), Gaps = 33/293 (11%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
+N ++G G +G V +L AIK L + DF + S++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + + L G +S ++V ++ GSL L T Q V + G
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGI 156
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT- 242
A G+++L + VHRD+ + N+L+ + K++DF L+ D ++TR
Sbjct: 157 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ +PE + T SDV+S+G+VL E+++ G +P W +S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W---EMSNQ 257
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
V + VD P C Q + + RP +V L L+ +
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 117/293 (39%), Gaps = 33/293 (11%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
+N ++G G +G V +L AIK L + DF + S++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + + L G +S ++V ++ GSL L T Q V + G
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGI 156
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT- 242
A G+++L + VHRD+ + N+L+ + K++DF L+ D ++TR
Sbjct: 157 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ +PE + T SDV+S+G+VL E+++ G +P W +S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W---EMSNQ 257
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
V + VD P C Q + + RP +V L L+ +
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 76 IGEGSYGRVFYAKL-TDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IGEGS G V A + + G A+KK+D E F ++ ++ +HE+ VE+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN-EVVIMRDYQHENVVEMYNSY 217
Query: 135 MESNNRILVYQFATMGSLHDVL-HGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
+ + +V +F G+L D++ H R + Q V + L LH +
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIAAVCLAVLQALSVLHAQ 266
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
++HRD++S ++LL D + K++DF Q S R ++GT + APE
Sbjct: 267 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISR 321
Query: 254 GQITQKSDVYSFGVVLLELLTGRKP 278
+ D++S G++++E++ G P
Sbjct: 322 LPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 17/217 (7%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
S + +IG G G V Y +L P AIK L DF ++ S++ +
Sbjct: 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD 108
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + + L G ++V ++ GSL L G T Q V + G
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG--------QFTIMQLVGMLRGV 160
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTN-QSSDTAARLHSTRVLGT 242
G+ +L + VHRD+ + NVL+ + K++DF L+ D A +T
Sbjct: 161 GAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIP 217
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ APE + SDV+SFGVV+ E+L G +P
Sbjct: 218 IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 22/208 (10%)
Query: 76 IGEGSYGRV---FYAKLTD--GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D G A+KKL S+ E DF ++ ++ L+H++ V+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKY 77
Query: 131 LGYCMESNNR--ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G C + R L+ ++ GSL D L K + + +L + ++ KG+E
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGME 129
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT--FGYH 246
+L K +HR++ + N+L+ ++ + KI DF LT + + + G ++
Sbjct: 130 YLGTK---RYIHRNLATRNILVENENRVKIGDFGLT-KVLPQDKEYYKVKEPGESPIFWY 185
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE + + SDV+SFGVVL EL T
Sbjct: 186 APESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 76 IGEGSYGRVFYAKL-TDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IGEGS G V A + + G A+KK+D E F ++ ++ +HE+ VE+
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN-EVVIMRDYQHENVVEMYNSY 140
Query: 135 MESNNRILVYQFATMGSLHDVL-HGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
+ + +V +F G+L D++ H R + Q V + L LH +
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIAAVCLAVLQALSVLHAQ 189
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
++HRD++S ++LL D + K++DF Q S R ++GT + APE
Sbjct: 190 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISR 244
Query: 254 GQITQKSDVYSFGVVLLELLTGRKP 278
+ D++S G++++E++ G P
Sbjct: 245 LPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 75 LIGEGSYGRVFYAKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V++ L D A+K L+ + S F + ++ H + + L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 131 LGYCMESNNR-ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LG C+ S ++V + G L R ++ P T + AKG+++
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNP--TVKDLIGFGLQVAKGMKY 147
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDT-AARLHS-TRVLGTFGYHA 247
L K VHRD+ + N +L + F K+ADF L D +H+ T + A
Sbjct: 148 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 248 PEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
E T + T KSDV+SFGV+L EL+T P
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 116/293 (39%), Gaps = 33/293 (11%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
+N ++G G +G V +L AIK L + DF + S++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + + L G +S ++V ++ GSL L T Q V + G
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVIQLVGMLRGI 156
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT- 242
A G+++L + VHRD+ + N+L+ + K++DF L D ++TR
Sbjct: 157 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIP 213
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ +PE + T SDV+S+G+VL E+++ G +P W +S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W---EMSNQ 257
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
V + VD P C Q + + RP +V L L+ +
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 75 LIGE-GSYGRVFYAKLTDGTP-AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLG 132
+IGE G +G+V+ A+ + + AA K +DT S E E D+ ++ +++ H + V+LL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELE-DYMVEIDILASCDHPNIVKLLD 74
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
NN ++ +F G++ V+ ++ P LT +Q V L +LH+
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVM-----LELERP---LTESQIQVVCKQTLDALNYLHD 126
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
I+HRD+++ N+L D K+ADF ++ +++ T + + +GT + APE M
Sbjct: 127 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDS-FIGTPYWMAPEVVM 182
Query: 253 TGQ-----ITQKSDVYSFGVVLLEL 272
K+DV+S G+ L+E+
Sbjct: 183 CETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 38/228 (16%)
Query: 79 GSYGRVFYAKL-TDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMES 137
G +G V+ A+L D I L + + E + + +KHE+ ++ +
Sbjct: 26 GRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFS----TPGMKHENLLQFIAAEKRG 81
Query: 138 NNR----ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
+N L+ F GSL D L G ++TWN+ VA ++GL +LHE
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYLKGN----------IITWNELCHVAETMSRGLSYLHED 131
Query: 194 V--------QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
V +P I HRD +S NVLL D + +ADF L + + +GT Y
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRY 191
Query: 246 HAPEYAMTGQIT------QKSDVYSFGVVLLELLTGRK----PVDHTM 283
APE + G I + D+Y+ G+VL EL++ K PVD M
Sbjct: 192 MAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYM 238
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 126/309 (40%), Gaps = 35/309 (11%)
Query: 58 IKLDELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAA 114
+ LD+ ++ K +G G +G V+ + K + K DT E F
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLK 56
Query: 115 QLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWN 174
+ +V+ +KH + V+LLG C ++ +F T G+L D L R+ + VL +
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLY- 113
Query: 175 QRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARL 234
+A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ +
Sbjct: 114 ----MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 166
Query: 235 HSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTW 293
H+ + APE + + KSDV++FGV+L E+ T G P
Sbjct: 167 HAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-------------- 211
Query: 294 ATPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLN 353
P + +V + ++ + P C Q+ RP+ + +A + +
Sbjct: 212 --PGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 269
Query: 354 SKPAGPEAQ 362
E +
Sbjct: 270 ESSISDEVE 278
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 76 IGEGSYGRVFYAKL-TDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IGEGS G V A + + G A+KK+D E F ++ ++ +HE+ VE+
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN-EVVIMRDYQHENVVEMYNSY 95
Query: 135 MESNNRILVYQFATMGSLHDVL-HGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
+ + +V +F G+L D++ H R + Q V + L LH +
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIAAVCLAVLQALSVLHAQ 144
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
++HRD++S ++LL D + K++DF Q S R ++GT + APE
Sbjct: 145 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISR 199
Query: 254 GQITQKSDVYSFGVVLLELLTGRKP 278
+ D++S G++++E++ G P
Sbjct: 200 LPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 76 IGEGSYGRVFYAKL-TDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IGEGS G V A + + G A+KK+D E F ++ ++ +HE+ VE+
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN-EVVIMRDYQHENVVEMYNSY 97
Query: 135 MESNNRILVYQFATMGSLHDVL-HGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
+ + +V +F G+L D++ H R + Q V + L LH +
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIAAVCLAVLQALSVLHAQ 146
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
++HRD++S ++LL D + K++DF Q S R ++GT + APE
Sbjct: 147 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISR 201
Query: 254 GQITQKSDVYSFGVVLLELLTGRKP 278
+ D++S G++++E++ G P
Sbjct: 202 LPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 75 LIGEGSYGRVFYAKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V++ L D A+K L+ + S F + ++ H + + L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 131 LGYCMESNNR-ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LG C+ S ++V + G L R ++ P T + AKG+++
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNP--TVKDLIGFGLQVAKGMKY 148
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSD---------TAARLHSTRVL 240
L K VHRD+ + N +L + F K+ADF L D T A+L
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL------ 199
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ A E T + T KSDV+SFGV+L EL+T P
Sbjct: 200 -PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 125/313 (39%), Gaps = 39/313 (12%)
Query: 56 PQIKLDELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDF 112
P D+ ++ K +G G YG V+ + K + K DT E F
Sbjct: 2 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----F 57
Query: 113 AAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPV 170
+ +V+ +KH + V+LLG C ++ +F T G+L D L R+ V V
Sbjct: 58 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV----V 113
Query: 171 LTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDT 230
L + +A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ +
Sbjct: 114 LLY-----MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 165
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQS 289
H+ + APE + + KSDV++FGV+L E+ T G P
Sbjct: 166 TXTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------- 214
Query: 290 LVTWATPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQ 349
P + +V + ++ + P C Q+ RP+ + +A +
Sbjct: 215 ------PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
Query: 350 PLLNSKPAGPEAQ 362
+ E +
Sbjct: 269 TMFQESSISDEVE 281
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 40/222 (18%)
Query: 75 LIGEGSYGRVFYAKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V++ L D A+K L+ + S F + ++ H + + L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 131 LGYCMESNNR-ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVK--VAYG--AAK 185
LG C+ S ++V + G L + + T N VK + +G AK
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE------------THNPTVKDLIGFGLQVAK 136
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSD---------TAARLHS 236
G+++L K VHRD+ + N +L + F K+ADF L D T A+L
Sbjct: 137 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL-- 191
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ A E T + T KSDV+SFGV+L EL+T P
Sbjct: 192 -----PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 75 LIGEGSYGRVFYAKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V++ L D A+K L+ + S F + ++ H + + L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 131 LGYCMESNNR-ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LG C+ S ++V + G L R ++ P T + AKG+++
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNP--TVKDLIGFGLQVAKGMKY 166
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSD---------TAARLHSTRVL 240
L K VHRD+ + N +L + F K+ADF L D T A+L
Sbjct: 167 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL------ 217
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ A E T + T KSDV+SFGV+L EL+T P
Sbjct: 218 -PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 76 IGEGSYGRV---FYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLG 132
+G G++G V Y AIK L + + + ++ +L + + V L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
C ++ +LV + A G LH L G++ E PV + ++ + + G+++L E
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFLVGKR-----EEIPV---SNVAELLHQVSMGMKYLEE 128
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEY 250
K VHRD+ + NVLL + +KI+DF L+ ++ ++ R G + ++APE
Sbjct: 129 K---NFVHRDLAARNVLLVNRHYAKISDFGLS-KALGADDSYYTARSAGKWPLKWYAPEC 184
Query: 251 AMTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ + +SDV+S+GV + E L+ G+KP
Sbjct: 185 INFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 75 LIGEGSYGRVFYAKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V++ L D A+K L+ + S F + ++ H + + L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 131 LGYCMESNNR-ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LG C+ S ++V + G L R ++ P T + AKG+++
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNP--TVKDLIGFGLQVAKGMKY 146
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSD---------TAARLHSTRVL 240
L K VHRD+ + N +L + F K+ADF L D T A+L
Sbjct: 147 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL------ 197
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ A E T + T KSDV+SFGV+L EL+T P
Sbjct: 198 -PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 116/293 (39%), Gaps = 33/293 (11%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
+N ++G G +G V +L AIK L + DF + S++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + + L G +S ++V ++ GSL L T Q V + G
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVIQLVGMLRGI 156
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT- 242
A G+++L + VHRD+ + N+L+ + K++DF L D ++TR
Sbjct: 157 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIP 213
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ +PE + T SDV+S+G+VL E+++ G +P W +S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W---EMSNQ 257
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
V + VD P C Q + + RP +V L L+ +
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 75 LIGEGSYGRVFYAKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V++ L D A+K L+ + S F + ++ H + + L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 131 LGYCMESNNR-ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LG C+ S ++V + G L R ++ P T + AKG+++
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNP--TVKDLIGFGLQVAKGMKY 167
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSD---------TAARLHSTRVL 240
L K VHRD+ + N +L + F K+ADF L D T A+L
Sbjct: 168 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL------ 218
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ A E T + T KSDV+SFGV+L EL+T P
Sbjct: 219 -PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 76 IGEGSYGRVFYAKL-TDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IGEGS G V A + + G A+KK+D E F ++ ++ +HE+ VE+
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN-EVVIMRDYQHENVVEMYNSY 86
Query: 135 MESNNRILVYQFATMGSLHDVL-HGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
+ + +V +F G+L D++ H R + Q V + L LH +
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIAAVCLAVLQALSVLHAQ 135
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
++HRD++S ++LL D + K++DF Q S R ++GT + APE
Sbjct: 136 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISR 190
Query: 254 GQITQKSDVYSFGVVLLELLTGRKP 278
+ D++S G++++E++ G P
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 75 LIGEGSYGRVFYAKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V++ L D A+K L+ + S F + ++ H + + L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 131 LGYCMESNNR-ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LG C+ S ++V + G L R ++ P T + AKG+++
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNP--TVKDLIGFGLQVAKGMKY 145
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSD---------TAARLHSTRVL 240
L K VHRD+ + N +L + F K+ADF L D T A+L
Sbjct: 146 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL------ 196
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ A E T + T KSDV+SFGV+L EL+T P
Sbjct: 197 -PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 75 LIGEGSYGRVFYAKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V++ L D A+K L+ + S F + ++ H + + L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 131 LGYCMESNNR-ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LG C+ S ++V + G L R ++ P T + AKG+++
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNP--TVKDLIGFGLQVAKGMKY 147
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSD---------TAARLHSTRVL 240
L K VHRD+ + N +L + F K+ADF L D T A+L
Sbjct: 148 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL------ 198
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ A E T + T KSDV+SFGV+L EL+T P
Sbjct: 199 -PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 75 LIGEGSYGRVFYAKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V++ L D A+K L+ + S F + ++ H + + L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 131 LGYCMESNNR-ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LG C+ S ++V + G L R ++ P T + AKG+++
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNP--TVKDLIGFGLQVAKGMKY 148
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSD---------TAARLHSTRVL 240
L K VHRD+ + N +L + F K+ADF L D T A+L
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL------ 199
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ A E T + T KSDV+SFGV+L EL+T P
Sbjct: 200 -PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 76 IGEGSYGRVFYAKL-TDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IGEGS G V A + + G A+KK+D E F ++ ++ +HE+ VE+
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN-EVVIMRDYQHENVVEMYNSY 90
Query: 135 MESNNRILVYQFATMGSLHDVL-HGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
+ + +V +F G+L D++ H R + Q V + L LH +
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIAAVCLAVLQALSVLHAQ 139
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
++HRD++S ++LL D + K++DF Q S R ++GT + APE
Sbjct: 140 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISR 194
Query: 254 GQITQKSDVYSFGVVLLELLTGRKP 278
+ D++S G++++E++ G P
Sbjct: 195 LPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 75 LIGEGSYGRVFYAKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V++ L D A+K L+ + S F + ++ H + + L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 131 LGYCMESNNR-ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LG C+ S ++V + G L R ++ P T + AKG+++
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNP--TVKDLIGFGLQVAKGMKY 143
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSD---------TAARLHSTRVL 240
L K VHRD+ + N +L + F K+ADF L D T A+L
Sbjct: 144 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL------ 194
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ A E T + T KSDV+SFGV+L EL+T P
Sbjct: 195 -PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 113/246 (45%), Gaps = 24/246 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTP---AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLG 132
IG+GS+G VF K D AIK +D A + D +++V+S+ + + G
Sbjct: 31 IGKGSFGEVF--KGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
++ + ++ ++ GS D+L GP + Q + KGL++LH
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRA---------GPFDEF-QIATMLKEILKGLDYLHS 138
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
+ + +HRD++++NVLL + K+ADF + Q +DT ++ +GT + APE
Sbjct: 139 EKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDT--QIKRNTFVGTPFWMAPEVIQ 193
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWAT-PRLSED---KVKQCVD 308
K+D++S G+ +EL G P P L+ P L D K+ +D
Sbjct: 194 QSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFID 253
Query: 309 PKLNND 314
LN D
Sbjct: 254 ACLNKD 259
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 17/217 (7%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
+N ++G G +G V +L AIK L + DF + S++ +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + + L G +S ++V + GSL L T Q V + G
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGI 127
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT- 242
A G+++L + VHRD+ + N+L+ + K++DF L+ D ++TR
Sbjct: 128 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ +PE + T SDV+S+G+VL E+++ G +P
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 124/306 (40%), Gaps = 35/306 (11%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
D+ ++ K +G G YG V+ + K + K DT E F + +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAA 61
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRV 177
V+ +KH + V+LLG C ++ +F T G+L D L R+ + VL +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLY---- 115
Query: 178 KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHST 237
+A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ + H+
Sbjct: 116 -MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 238 RVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATP 296
+ APE + + KSDV++FGV+L E+ T G P P
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 214
Query: 297 RLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKP 356
+ +V + ++ + P C Q+ RP+ + +A + +
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274
Query: 357 AGPEAQ 362
E +
Sbjct: 275 ISDEVE 280
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 32/236 (13%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTP------AAIKKLDTSSAPEPESDF 112
KL E++ F + +GE +G+V+ L P AIK L + +F
Sbjct: 2 KLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 59
Query: 113 AAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGR------------K 160
+ + +RL+H + V LLG + +++ + + G LH+ L R +
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 161 GVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIAD 220
V+ A P V + A G+E+L +VH+D+ + NVL++D KI+D
Sbjct: 120 TVKSALEPPDF-----VHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISD 171
Query: 221 FNLTNQ--SSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
L + ++D L ++ L + APE M G+ + SD++S+GVVL E+ +
Sbjct: 172 LGLFREVYAADYYKLLGNS--LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 124/306 (40%), Gaps = 35/306 (11%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
D+ ++ K +G G YG V+ + K + K DT E F + +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAA 61
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRV 177
V+ +KH + V+LLG C ++ +F T G+L D L R+ + VL +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLY---- 115
Query: 178 KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHST 237
+A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ + H+
Sbjct: 116 -MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 238 RVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATP 296
+ APE + + KSDV++FGV+L E+ T G P P
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 214
Query: 297 RLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKP 356
+ +V + ++ + P C Q+ RP+ + +A + +
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274
Query: 357 AGPEAQ 362
E +
Sbjct: 275 ISDEVE 280
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 39/228 (17%)
Query: 79 GSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESN 138
G +G V+ A+L + A+K ++++ ++ + +KHE+ ++ +G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEKRGT 91
Query: 139 ----NRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
+ L+ F GSL D L V++WN+ +A A+GL +LHE +
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFLKAN----------VVSWNELCHIAETMARGLAYLHEDI 141
Query: 195 -------QPPIVHRDVRSSNVLLFDDFKSKIADFNLT--NQSSDTAARLHSTRVLGTFGY 245
+P I HRD++S NVLL ++ + IADF L ++ +A H +GT Y
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ--VGTRRY 199
Query: 246 HAPEYAMTGQIT------QKSDVYSFGVVLLELLT----GRKPVDHTM 283
APE + G I + D+Y+ G+VL EL + PVD M
Sbjct: 200 MAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYM 246
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 124/306 (40%), Gaps = 35/306 (11%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
D+ ++ K +G G YG V+ + K + K DT E F + +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAA 66
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRV 177
V+ +KH + V+LLG C ++ +F T G+L D L R+ + VL +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLY---- 120
Query: 178 KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHST 237
+A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ + H+
Sbjct: 121 -MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 238 RVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATP 296
+ APE + + KSDV++FGV+L E+ T G P P
Sbjct: 177 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 219
Query: 297 RLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKP 356
+ +V + ++ + P C Q+ RP+ + +A + +
Sbjct: 220 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 279
Query: 357 AGPEAQ 362
E +
Sbjct: 280 ISDEVE 285
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 116/293 (39%), Gaps = 33/293 (11%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
+N ++G G +G V +L AIK L + DF + S++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + + L G +S ++V + GSL L T Q V + G
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGI 156
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT- 242
A G+++L + VHRD+ + N+L+ + K++DF L+ D ++TR
Sbjct: 157 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ +PE + T SDV+S+G+VL E+++ G +P W +S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W---EMSNQ 257
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
V + VD P C Q + + RP +V L L+ +
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 75 LIGEGSYGRVFYAKLT--DGTP--AAIK--KLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
++GEG +G V L DGT A+K KLD SS E E +F ++ + + H + +
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIE-EFLSEAACMKDFSHPNVI 99
Query: 129 ELLGYCMESNNR-----ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
LLG C+E +++ +++ F G LH L + G + P+ T +K
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQT---LLKFMVDI 156
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
A G+E+L + +HRD+ + N +L DD +ADF L+ +
Sbjct: 157 ALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPV 213
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ A E T KSDV++FGV + E+ T
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 116/293 (39%), Gaps = 33/293 (11%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
+N ++G G +G V +L AIK L + DF + S++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + + L G +S ++V + GSL L T Q V + G
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGI 156
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT- 242
A G+++L + VHRD+ + N+L+ + K++DF L+ D ++TR
Sbjct: 157 ASGMKYLSDM---GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSED 301
+ +PE + T SDV+S+G+VL E+++ G +P W +S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W---EMSNQ 257
Query: 302 KVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
V + VD P C Q + + RP +V L L+ +
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 124/306 (40%), Gaps = 35/306 (11%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
D+ ++ K +G G YG V+ + K + K DT E F + +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAA 61
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRV 177
V+ +KH + V+LLG C ++ +F T G+L D L R+ + VL +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLY---- 115
Query: 178 KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHST 237
+A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ + H+
Sbjct: 116 -MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 238 RVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATP 296
+ APE + + KSDV++FGV+L E+ T G P P
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 214
Query: 297 RLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKP 356
+ +V + ++ + P C Q+ RP+ + +A + +
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274
Query: 357 AGPEAQ 362
E +
Sbjct: 275 ISDEVE 280
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 130/301 (43%), Gaps = 33/301 (10%)
Query: 47 PQKALPIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSA 105
PQKAL P + + L +NF + IG G + V+ A L DG P A+KK+
Sbjct: 18 PQKALR---PDMGYNTL----ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL 70
Query: 106 PEPES--DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQ 163
+ ++ D ++ ++ +L H + ++ +E N +V + A G L ++ K +
Sbjct: 71 MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQK 130
Query: 164 GAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNL 223
P + W V++ LE +H + ++HRD++ +NV + K+ D L
Sbjct: 131 RLIPERTV-WKYFVQLC----SALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGL 182
Query: 224 TNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTM 283
S HS ++GT Y +PE KSD++S G +L E+ + P
Sbjct: 183 GRFFSSKTTAAHS--LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP----F 236
Query: 284 PKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTI 343
+ +L + K++QC P L +D+ C+ + + RP++T
Sbjct: 237 YGDKMNLYSLCK------KIEQCDYPPLPSDH---YSEELRQLVNMCINPDPEKRPDVTY 287
Query: 344 V 344
V
Sbjct: 288 V 288
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 33/246 (13%)
Query: 55 IPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPESDFA 113
+ +I L L F L+G G+YG+V+ + + G AAIK +D + + E +
Sbjct: 11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIK 68
Query: 114 AQLSVVSRLKH-EHFVELLGYCMESN------NRILVYQFATMGSLHDVLHGRKGVQGAE 166
+++++ + H + G ++ N LV +F GS+ D++ KG E
Sbjct: 69 QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE 128
Query: 167 PGPVLTWNQRVKVAY---GAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNL 223
W +AY +GL LH Q ++HRD++ NVLL ++ + K+ DF +
Sbjct: 129 -----EW-----IAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGV 175
Query: 224 TNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQ-----ITQKSDVYSFGVVLLELLTGRKP 278
+ Q T R ++ +GT + APE + KSD++S G+ +E+ G P
Sbjct: 176 SAQLDRTVGRRNT--FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
Query: 279 VDHTMP 284
+ P
Sbjct: 234 LCDMHP 239
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 25/222 (11%)
Query: 67 TSNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
S + +IG G +G V +L AIK L + DF + S++ +
Sbjct: 42 ASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQF 101
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
H + V L G ++V +F G+L L G T Q V + G
Sbjct: 102 DHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDG--------QFTVIQLVGMLRG 153
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
A G+ +L + VHRD+ + N+L+ + K++DF L+ D +++T T
Sbjct: 154 IAAGMRYLADM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTT----T 206
Query: 243 FG-----YHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
G + APE + T SDV+S+G+V+ E+++ G +P
Sbjct: 207 GGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 124/308 (40%), Gaps = 39/308 (12%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
D+ ++ K +G G YG V+ + K + K DT E F + +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAA 66
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQ 175
V+ +KH + V+LLG C ++ +F T G+L D L R+ V VL +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLY-- 120
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
+A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ + H
Sbjct: 121 ---MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 174
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWA 294
+ + APE + + KSDV++FGV+L E+ T G P
Sbjct: 175 AGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--------------- 218
Query: 295 TPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
P + +V + ++ + P C Q+ RP+ + +A + +
Sbjct: 219 -PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
Query: 355 KPAGPEAQ 362
E +
Sbjct: 278 SSISDEVE 285
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 124/308 (40%), Gaps = 39/308 (12%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
D+ ++ K +G G YG V+ + K + K DT E F + +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAA 63
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQ 175
V+ +KH + V+LLG C ++ +F T G+L D L R+ V VL +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLY-- 117
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
+A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ + H
Sbjct: 118 ---MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 171
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWA 294
+ + APE + + KSDV++FGV+L E+ T G P
Sbjct: 172 AGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--------------- 215
Query: 295 TPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
P + +V + ++ + P C Q+ RP+ + +A + +
Sbjct: 216 -PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 274
Query: 355 KPAGPEAQ 362
E +
Sbjct: 275 SSISDEVE 282
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 76 IGEGSYGRVFYAK-LTDGTPAAIKKLDTS--SAPEPESDFAAQLSVVSRLKHEHFVELLG 132
IG GS+G V++A+ + + AIKK+ S + E D ++ + +L+H + ++ G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 133 YCMESNNRILVYQFATMGSLHDVLH-GRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
+ + LV ++ +GS D+L +K +Q E V +GA +GL +LH
Sbjct: 122 CYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAV---------THGALQGLAYLH 171
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYA 251
++HRDV++ N+LL + K+ DF S+ A + +GT + APE
Sbjct: 172 SH---NMIHRDVKAGNILLSEPGLVKLGDFG----SASIMAP--ANXFVGTPYWMAPEVI 222
Query: 252 MT---GQITQKSDVYSFGVVLLELLTGRKP 278
+ GQ K DV+S G+ +E L RKP
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIE-LAERKP 251
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 124/308 (40%), Gaps = 39/308 (12%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
D+ ++ K +G G YG V+ + K + K DT E F + +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAA 63
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQ 175
V+ +KH + V+LLG C ++ +F T G+L D L R+ V VL +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLY-- 117
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
+A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ + H
Sbjct: 118 ---MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 171
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWA 294
+ + APE + + KSDV++FGV+L E+ T G P
Sbjct: 172 AGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--------------- 215
Query: 295 TPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
P + +V + ++ + P C Q+ RP+ + +A + +
Sbjct: 216 -PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 274
Query: 355 KPAGPEAQ 362
E +
Sbjct: 275 SSISDEVE 282
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 115/286 (40%), Gaps = 35/286 (12%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V Y K AIK + S E E F + V+ L HE V+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE--FIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ ++ ++ G L + L E Q +++ + +E+L K
Sbjct: 75 KQRPIFIITEYMANGCLLNYLR--------EMRHRFQTQQLLEMCKDVCEAMEYLESK-- 124
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
+HRD+ + N L+ D K++DF L+ D +++ V F + PE M
Sbjct: 125 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMY 180
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLN 312
+ + KSD+++FGV++ E+ + G+ P + R + + + + L
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKMPYE----------------RFTNSETAEHIAQGLR 224
Query: 313 NDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKPAG 358
P C +AD RP I++ + +++ G
Sbjct: 225 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDENLYG 270
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 124/306 (40%), Gaps = 35/306 (11%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
D+ ++ K +G G YG V+ + K + K DT E F + +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAA 61
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRV 177
V+ +KH + V+LLG C ++ +F T G+L D L R+ + VL +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVL-----L 114
Query: 178 KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHST 237
+A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ + H+
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 238 RVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATP 296
+ APE + + KSDV++FGV+L E+ T G P P
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 214
Query: 297 RLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKP 356
+ +V + ++ + P C Q+ RP+ + +A + +
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274
Query: 357 AGPEAQ 362
E +
Sbjct: 275 ISDEVE 280
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 115/283 (40%), Gaps = 35/283 (12%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V Y K AIK + S E E F + V+ L HE V+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE--FIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ ++ ++ G L + L E Q +++ + +E+L K
Sbjct: 90 KQRPIFIITEYMANGCLLNYLR--------EMRHRFQTQQLLEMCKDVCEAMEYLESK-- 139
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
+HRD+ + N L+ D K++DF L+ D +++ V F + PE M
Sbjct: 140 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMY 195
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLN 312
+ + KSD+++FGV++ E+ + G+ P + R + + + + L
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKMPYE----------------RFTNSETAEHIAQGLR 239
Query: 313 NDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSK 355
P C +AD RP I++ + +++ +
Sbjct: 240 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 76 IGEGSYGRVFYAK-LTDGTPAAIKKLDTS--SAPEPESDFAAQLSVVSRLKHEHFVELLG 132
IG GS+G V++A+ + + AIKK+ S + E D ++ + +L+H + ++ G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 133 YCMESNNRILVYQFATMGSLHDVLH-GRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
+ + LV ++ +GS D+L +K +Q E V +GA +GL +LH
Sbjct: 83 CYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAV---------THGALQGLAYLH 132
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYA 251
++HRDV++ N+LL + K+ DF S+ A + +GT + APE
Sbjct: 133 SH---NMIHRDVKAGNILLSEPGLVKLGDFG----SASIMAP--ANXFVGTPYWMAPEVI 183
Query: 252 MT---GQITQKSDVYSFGVVLLELLTGRKP 278
+ GQ K DV+S G+ +E L RKP
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIE-LAERKP 212
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 27/244 (11%)
Query: 76 IGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG+G+ G V+ A + G AI++++ P+ E ++ V+ K+ + V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIVNYLDSY 86
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
+ + +V ++ GSL DV+ +G Q V + LEFLH
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEG----------QIAAVCRECLQALEFLHSN- 135
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG 254
++HRD++S N+LL D K+ DF Q + ++ + ++GT + APE
Sbjct: 136 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAPEVVTRK 191
Query: 255 QITQKSDVYSFGVVLLELLTGRKPVDHTMP-KGQQSLVTWATPRLS---------EDKVK 304
K D++S G++ +E++ G P + P + + T TP L D +
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 251
Query: 305 QCVD 308
+C+D
Sbjct: 252 RCLD 255
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 22/224 (9%)
Query: 56 PQIKLDELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDF 112
P D+ ++ K +G G YG V+ + K + K DT E F
Sbjct: 5 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----F 60
Query: 113 AAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPV 170
+ +V+ +KH + V+LLG C ++ +F T G+L D L R+ V V
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----V 116
Query: 171 LTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDT 230
L + +A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ +
Sbjct: 117 L-----LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 168
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
H+ + APE + + KSDV++FGV+L E+ T
Sbjct: 169 TYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 22/219 (10%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
D+ ++ K +G G YG V+ + K + K DT E F + +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAA 66
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQ 175
V+ +KH + V+LLG C ++ +F T G+L D L R+ V VL
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VL---- 118
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
+ +A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ + H
Sbjct: 119 -LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAH 174
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ + APE + + KSDV++FGV+L E+ T
Sbjct: 175 AGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 26/244 (10%)
Query: 52 PIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYA------KLTDGTPAAIKKLDTSSA 105
P ++P + E R FG +G G++G+V A K A+K L +++
Sbjct: 17 PTQLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 74
Query: 106 PEPESDFAAQLSVVSRL-KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH------- 157
+ + ++L ++S L +HE+ V LLG C +++ ++ G L + L
Sbjct: 75 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAML 134
Query: 158 GRKGVQGAEP-------GPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL 210
G G +P G L + + A+G+ FL K +HRDV + NVLL
Sbjct: 135 GPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLL 191
Query: 211 FDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
+ +KI DF L + + + + APE T +SDV+S+G++L
Sbjct: 192 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 251
Query: 271 ELLT 274
E+ +
Sbjct: 252 EIFS 255
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 115/283 (40%), Gaps = 35/283 (12%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V Y K AIK + S E E F + V+ L HE V+L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE--FIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ ++ ++ G L + L E Q +++ + +E+L K
Sbjct: 81 KQRPIFIITEYMANGCLLNYLR--------EMRHRFQTQQLLEMCKDVCEAMEYLESK-- 130
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
+HRD+ + N L+ D K++DF L+ D +++ V F + PE M
Sbjct: 131 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMY 186
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLN 312
+ + KSD+++FGV++ E+ + G+ P + R + + + + L
Sbjct: 187 SKFSSKSDIWAFGVLMWEIYSLGKMPYE----------------RFTNSETAEHIAQGLR 230
Query: 313 NDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSK 355
P C +AD RP I++ + +++ +
Sbjct: 231 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 273
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 124/308 (40%), Gaps = 39/308 (12%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
D+ ++ K +G G YG V+ + K + K DT E F + +
Sbjct: 19 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAA 74
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQ 175
V+ +KH + V+LLG C ++ +F T G+L D L R+ V VL +
Sbjct: 75 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLY-- 128
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
+A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ + H
Sbjct: 129 ---MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 182
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWA 294
+ + APE + + KSDV++FGV+L E+ T G P
Sbjct: 183 AGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--------------- 226
Query: 295 TPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
P + +V + ++ + P C Q+ RP+ + +A + +
Sbjct: 227 -PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 285
Query: 355 KPAGPEAQ 362
E +
Sbjct: 286 SSISDEVE 293
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 106/221 (47%), Gaps = 29/221 (13%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLTDGTPA----AIKKLDTSSAPEPESDFAAQLSVVSRLK 123
S F ++G+GS+G+VF K G+ A A+K L A L V R++
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK-----------KATLKVRDRVR 72
Query: 124 HEHFVELLGYCMESNNRILV---YQFATMGSLHDVLHGRKG--VQGAEPGPVLTWNQRVK 178
+ ++L +E N+ +V Y F T G L+ +L +G + V+ + VK
Sbjct: 73 TKMERDIL---VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK 129
Query: 179 VAYGA-AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHST 237
A L+ LH I++RD++ N+LL ++ K+ DF L+ +S D + +S
Sbjct: 130 FYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS- 185
Query: 238 RVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
GT Y APE TQ +D +SFGV++ E+LTG P
Sbjct: 186 -FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 75 LIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG G +G V L AIK L + + DF ++ S++ + H + + L
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 131 LGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFL 190
G +S +++ +F GSL L G T Q V + G A G+++L
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQNDG--------QFTVIQLVGMLRGIAAGMKYL 125
Query: 191 HEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT---FGYHA 247
+ VHR + + N+L+ + K++DF L+ D + T LG + A
Sbjct: 126 ADM---NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 182
Query: 248 PEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
PE + T SDV+S+G+V+ E+++ G +P
Sbjct: 183 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 22/219 (10%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
D+ ++ K +G G YG V+ + K + K DT E F + +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAA 66
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQ 175
V+ +KH + V+LLG C ++ +F T G+L D L R+ V VL
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV----VL---- 118
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
+ +A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ + H
Sbjct: 119 -LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 174
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ + APE + + KSDV++FGV+L E+ T
Sbjct: 175 AGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 117/252 (46%), Gaps = 27/252 (10%)
Query: 76 IGEGSYGRVF--YAKLTDGTPAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELL 131
+G G++G V Y ++ K+ + A +P + + A+ +V+ +L + + V ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G C E+ + +LV + A +G L+ L + V+ +++ + + G+++L
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI---------IELVHQVSMGMKYLE 128
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ-SSDTAARLHSTRVLGTFGYHAPEY 250
E VHRD+ + NVLL +KI+DF L+ +D T ++APE
Sbjct: 129 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPEC 185
Query: 251 AMTGQITQKSDVYSFGVVLLELLT-GRKP--------VDHTMPKGQQSLVTWATPRLSED 301
+ + KSDV+SFGV++ E + G+KP V + KG++ PR D
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 245
Query: 302 KVKQCVDPKLNN 313
+ C + N
Sbjct: 246 LMNLCWTYDVEN 257
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 27/244 (11%)
Query: 76 IGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG+G+ G V+ A + G AI++++ P+ E ++ V+ K+ + V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIVNYLDSY 86
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
+ + +V ++ GSL DV+ +G Q V + LEFLH
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEG----------QIAAVCRECLQALEFLHSN- 135
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG 254
++HRD++S N+LL D K+ DF Q + ++ ST V GT + APE
Sbjct: 136 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMV-GTPYWMAPEVVTRK 191
Query: 255 QITQKSDVYSFGVVLLELLTGRKPVDHTMP-KGQQSLVTWATPRLS---------EDKVK 304
K D++S G++ +E++ G P + P + + T TP L D +
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 251
Query: 305 QCVD 308
+C+D
Sbjct: 252 RCLD 255
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 37/284 (13%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V Y K AIK + S E E F + V+ L HE V+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE--FIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ ++ ++ G L + L E Q +++ + +E+L K
Sbjct: 90 KQRPIFIITEYMANGCLLNYLR--------EMRHRFQTQQLLEMCKDVCEAMEYLESK-- 139
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT---FGYHAPEYAM 252
+HRD+ + N L+ D K++DF L+ D T +G+ + PE M
Sbjct: 140 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD----EETSSVGSKFPVRWSPPEVLM 194
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKL 311
+ + KSD+++FGV++ E+ + G+ P + R + + + + L
Sbjct: 195 YSKFSSKSDIWAFGVLMWEIYSLGKMPYE----------------RFTNSETAEHIAQGL 238
Query: 312 NNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSK 355
P C +AD RP I++ + +++ +
Sbjct: 239 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 22/219 (10%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
D+ ++ K +G G YG V+ + K + K DT E F + +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAA 66
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQ 175
V+ +KH + V+LLG C ++ +F T G+L D L R+ V VL
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VL---- 118
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
+ +A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ + H
Sbjct: 119 -LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 174
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ + APE + + KSDV++FGV+L E+ T
Sbjct: 175 AGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 106/221 (47%), Gaps = 29/221 (13%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLTDGTPA----AIKKLDTSSAPEPESDFAAQLSVVSRLK 123
S F ++G+GS+G+VF K G+ A A+K L A L V R++
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKK-----------ATLKVRDRVR 73
Query: 124 HEHFVELLGYCMESNNRILV---YQFATMGSLHDVLHGRKG--VQGAEPGPVLTWNQRVK 178
+ ++L +E N+ +V Y F T G L+ +L +G + V+ + VK
Sbjct: 74 TKMERDIL---VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK 130
Query: 179 VAYGA-AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHST 237
A L+ LH I++RD++ N+LL ++ K+ DF L+ +S D + +S
Sbjct: 131 FYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS- 186
Query: 238 RVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
GT Y APE TQ +D +SFGV++ E+LTG P
Sbjct: 187 -FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 106/221 (47%), Gaps = 29/221 (13%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLTDGTPA----AIKKLDTSSAPEPESDFAAQLSVVSRLK 123
S F ++G+GS+G+VF K G+ A A+K L A L V R++
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK-----------KATLKVRDRVR 72
Query: 124 HEHFVELLGYCMESNNRILV---YQFATMGSLHDVLHGRKG--VQGAEPGPVLTWNQRVK 178
+ ++L +E N+ +V Y F T G L+ +L +G + V+ + VK
Sbjct: 73 TKMERDIL---VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK 129
Query: 179 VAYGA-AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHST 237
A L+ LH I++RD++ N+LL ++ K+ DF L+ +S D + +S
Sbjct: 130 FYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS- 185
Query: 238 RVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
GT Y APE TQ +D +SFGV++ E+LTG P
Sbjct: 186 -FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 115/283 (40%), Gaps = 35/283 (12%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V Y K AIK + S E E F + V+ L HE V+L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE--FIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ ++ ++ G L + L E Q +++ + +E+L K
Sbjct: 74 KQRPIFIITEYMANGCLLNYLR--------EMRHRFQTQQLLEMCKDVCEAMEYLESK-- 123
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
+HRD+ + N L+ D K++DF L+ D +++ V F + PE M
Sbjct: 124 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMY 179
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLN 312
+ + KSD+++FGV++ E+ + G+ P + R + + + + L
Sbjct: 180 SKFSSKSDIWAFGVLMWEIYSLGKMPYE----------------RFTNSETAEHIAQGLR 223
Query: 313 NDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSK 355
P C +AD RP I++ + +++ +
Sbjct: 224 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 266
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 117/252 (46%), Gaps = 27/252 (10%)
Query: 76 IGEGSYGRVF--YAKLTDGTPAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELL 131
+G G++G V Y ++ K+ + A +P + + A+ +V+ +L + + V ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G C E+ + +LV + A +G L+ L + V+ +++ + + G+++L
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNIIELVHQVSMGMKYLE 144
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ-SSDTAARLHSTRVLGTFGYHAPEY 250
E VHRD+ + NVLL +KI+DF L+ +D T ++APE
Sbjct: 145 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 251 AMTGQITQKSDVYSFGVVLLELLT-GRKP--------VDHTMPKGQQSLVTWATPRLSED 301
+ + KSDV+SFGV++ E + G+KP V + KG++ PR D
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 261
Query: 302 KVKQCVDPKLNN 313
+ C + N
Sbjct: 262 LMNLCWTYDVEN 273
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 117/252 (46%), Gaps = 27/252 (10%)
Query: 76 IGEGSYGRVF--YAKLTDGTPAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELL 131
+G G++G V Y ++ K+ + A +P + + A+ +V+ +L + + V ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G C E+ + +LV + A +G L+ L + V+ +++ + + G+++L
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNIIELVHQVSMGMKYLE 144
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ-SSDTAARLHSTRVLGTFGYHAPEY 250
E VHRD+ + NVLL +KI+DF L+ +D T ++APE
Sbjct: 145 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 251 AMTGQITQKSDVYSFGVVLLELLT-GRKP--------VDHTMPKGQQSLVTWATPRLSED 301
+ + KSDV+SFGV++ E + G+KP V + KG++ PR D
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 261
Query: 302 KVKQCVDPKLNN 313
+ C + N
Sbjct: 262 LMNLCWTYDVEN 273
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 18/225 (8%)
Query: 76 IGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG+G+ G V+ A + G AI++++ P+ E ++ V+ K+ + V L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIVNYLDSY 87
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
+ + +V ++ GSL DV+ +G Q V + LEFLH
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEG----------QIAAVCRECLQALEFLHSN- 136
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG 254
++HRD++S N+LL D K+ DF Q + ++ + ++GT + APE
Sbjct: 137 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRK 192
Query: 255 QITQKSDVYSFGVVLLELLTGRKPVDHTMP-KGQQSLVTWATPRL 298
K D++S G++ +E++ G P + P + + T TP L
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL 237
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 117/252 (46%), Gaps = 27/252 (10%)
Query: 76 IGEGSYGRVF--YAKLTDGTPAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELL 131
+G G++G V Y ++ K+ + A +P + + A+ +V+ +L + + V ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G C E+ + +LV + A +G L+ L + V+ +++ + + G+++L
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI---------IELVHQVSMGMKYLE 128
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ-SSDTAARLHSTRVLGTFGYHAPEY 250
E VHRD+ + NVLL +KI+DF L+ +D T ++APE
Sbjct: 129 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 185
Query: 251 AMTGQITQKSDVYSFGVVLLELLT-GRKP--------VDHTMPKGQQSLVTWATPRLSED 301
+ + KSDV+SFGV++ E + G+KP V + KG++ PR D
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 245
Query: 302 KVKQCVDPKLNN 313
+ C + N
Sbjct: 246 LMNLCWTYDVEN 257
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 18/225 (8%)
Query: 76 IGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG+G+ G V+ A + G AI++++ P+ E ++ V+ K+ + V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIVNYLDSY 86
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
+ + +V ++ GSL DV+ +G Q V + LEFLH
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEG----------QIAAVCRECLQALEFLHSN- 135
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG 254
++HRD++S N+LL D K+ DF Q + ++ + ++GT + APE
Sbjct: 136 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRK 191
Query: 255 QITQKSDVYSFGVVLLELLTGRKPVDHTMP-KGQQSLVTWATPRL 298
K D++S G++ +E++ G P + P + + T TP L
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL 236
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 117/252 (46%), Gaps = 27/252 (10%)
Query: 76 IGEGSYGRVF--YAKLTDGTPAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELL 131
+G G++G V Y ++ K+ + A +P + + A+ +V+ +L + + V ++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G C E+ + +LV + A +G L+ L + V+ +++ + + G+++L
Sbjct: 437 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNIIELVHQVSMGMKYLE 486
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ-SSDTAARLHSTRVLGTFGYHAPEY 250
E VHRD+ + NVLL +KI+DF L+ +D T ++APE
Sbjct: 487 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 543
Query: 251 AMTGQITQKSDVYSFGVVLLELLT-GRKP--------VDHTMPKGQQSLVTWATPRLSED 301
+ + KSDV+SFGV++ E + G+KP V + KG++ PR D
Sbjct: 544 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 603
Query: 302 KVKQCVDPKLNN 313
+ C + N
Sbjct: 604 LMNLCWTYDVEN 615
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 13/138 (9%)
Query: 142 LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHR 201
+V ++ +L D++H GP +T + ++V A + L F H Q I+HR
Sbjct: 93 IVMEYVDGVTLRDIVHTE--------GP-MTPKRAIEVIADACQALNFSH---QNGIIHR 140
Query: 202 DVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR-VLGTFGYHAPEYAMTGQITQKS 260
DV+ +N+L+ K+ DF + +D+ + T V+GT Y +PE A + +S
Sbjct: 141 DVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 261 DVYSFGVVLLELLTGRKP 278
DVYS G VL E+LTG P
Sbjct: 201 DVYSLGCVLYEVLTGEPP 218
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 117/252 (46%), Gaps = 27/252 (10%)
Query: 76 IGEGSYGRVF--YAKLTDGTPAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELL 131
+G G++G V Y ++ K+ + A +P + + A+ +V+ +L + + V ++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G C E+ + +LV + A +G L+ L + V+ +++ + + G+++L
Sbjct: 93 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNIIELVHQVSMGMKYLE 142
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ-SSDTAARLHSTRVLGTFGYHAPEY 250
E VHRD+ + NVLL +KI+DF L+ +D T ++APE
Sbjct: 143 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 199
Query: 251 AMTGQITQKSDVYSFGVVLLELLT-GRKP--------VDHTMPKGQQSLVTWATPRLSED 301
+ + KSDV+SFGV++ E + G+KP V + KG++ PR D
Sbjct: 200 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 259
Query: 302 KVKQCVDPKLNN 313
+ C + N
Sbjct: 260 LMNLCWTYDVEN 271
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 22/219 (10%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
D+ ++ K +G G YG V+ + K + K DT E F + +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAA 61
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQ 175
V+ +KH + V+LLG C ++ +F T G+L D L R+ V VL
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VL---- 113
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
+ +A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ + H
Sbjct: 114 -LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ + APE + + KSDV++FGV+L E+ T
Sbjct: 170 AGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 117/252 (46%), Gaps = 27/252 (10%)
Query: 76 IGEGSYGRVF--YAKLTDGTPAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELL 131
+G G++G V Y ++ K+ + A +P + + A+ +V+ +L + + V ++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G C E+ + +LV + A +G L+ L + V+ +++ + + G+++L
Sbjct: 438 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNIIELVHQVSMGMKYLE 487
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ-SSDTAARLHSTRVLGTFGYHAPEY 250
E VHRD+ + NVLL +KI+DF L+ +D T ++APE
Sbjct: 488 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 544
Query: 251 AMTGQITQKSDVYSFGVVLLELLT-GRKP--------VDHTMPKGQQSLVTWATPRLSED 301
+ + KSDV+SFGV++ E + G+KP V + KG++ PR D
Sbjct: 545 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 604
Query: 302 KVKQCVDPKLNN 313
+ C + N
Sbjct: 605 LMNLCWTYDVEN 616
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 117/252 (46%), Gaps = 27/252 (10%)
Query: 76 IGEGSYGRVF--YAKLTDGTPAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELL 131
+G G++G V Y ++ K+ + A +P + + A+ +V+ +L + + V ++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G C E+ + +LV + A +G L+ L + V+ +++ + + G+++L
Sbjct: 85 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI---------IELVHQVSMGMKYLE 134
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ-SSDTAARLHSTRVLGTFGYHAPEY 250
E VHRD+ + NVLL +KI+DF L+ +D T ++APE
Sbjct: 135 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 191
Query: 251 AMTGQITQKSDVYSFGVVLLELLT-GRKP--------VDHTMPKGQQSLVTWATPRLSED 301
+ + KSDV+SFGV++ E + G+KP V + KG++ PR D
Sbjct: 192 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 251
Query: 302 KVKQCVDPKLNN 313
+ C + N
Sbjct: 252 LMNLCWTYDVEN 263
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V K A+K + S E E F + + +L H V+ G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDE--FFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ +V ++ + G L + L R +G EP +Q +++ Y +G+ FL
Sbjct: 74 KEYPIYIVTEYISNGCLLNYL--RSHGKGLEP------SQLLEMCYDVCEGMAFLESH-- 123
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQ 255
+HRD+ + N L+ D K++DF +T D + S + APE +
Sbjct: 124 -QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-VSSVGTKFPVKWSAPEVFHYFK 181
Query: 256 ITQKSDVYSFGVVLLELLT-GRKPVD 280
+ KSDV++FG+++ E+ + G+ P D
Sbjct: 182 YSSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 117/252 (46%), Gaps = 27/252 (10%)
Query: 76 IGEGSYGRVF--YAKLTDGTPAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELL 131
+G G++G V Y ++ K+ + A +P + + A+ +V+ +L + + V ++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G C E+ + +LV + A +G L+ L + V+ +++ + + G+++L
Sbjct: 75 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI---------IELVHQVSMGMKYLE 124
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ-SSDTAARLHSTRVLGTFGYHAPEY 250
E VHRD+ + NVLL +KI+DF L+ +D T ++APE
Sbjct: 125 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 181
Query: 251 AMTGQITQKSDVYSFGVVLLELLT-GRKP--------VDHTMPKGQQSLVTWATPRLSED 301
+ + KSDV+SFGV++ E + G+KP V + KG++ PR D
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 241
Query: 302 KVKQCVDPKLNN 313
+ C + N
Sbjct: 242 LMNLCWTYDVEN 253
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 115/283 (40%), Gaps = 35/283 (12%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V Y K AIK + S E E F + V+ L HE V+L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE--FIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ ++ ++ G L + L E Q +++ + +E+L K
Sbjct: 70 KQRPIFIITEYMANGCLLNYLR--------EMRHRFQTQQLLEMCKDVCEAMEYLESK-- 119
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEYAMT 253
+HRD+ + N L+ D K++DF L+ D +++ V F + PE M
Sbjct: 120 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMY 175
Query: 254 GQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLN 312
+ + KSD+++FGV++ E+ + G+ P + R + + + + L
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYSLGKMPYE----------------RFTNSETAEHIAQGLR 219
Query: 313 NDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSK 355
P C +AD RP I++ + +++ +
Sbjct: 220 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 262
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 117/252 (46%), Gaps = 27/252 (10%)
Query: 76 IGEGSYGRVF--YAKLTDGTPAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELL 131
+G G++G V Y ++ K+ + A +P + + A+ +V+ +L + + V ++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G C E+ + +LV + A +G L+ L + V+ +++ + + G+++L
Sbjct: 73 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI---------IELVHQVSMGMKYLE 122
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ-SSDTAARLHSTRVLGTFGYHAPEY 250
E VHRD+ + NVLL +KI+DF L+ +D T ++APE
Sbjct: 123 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 179
Query: 251 AMTGQITQKSDVYSFGVVLLELLT-GRKP--------VDHTMPKGQQSLVTWATPRLSED 301
+ + KSDV+SFGV++ E + G+KP V + KG++ PR D
Sbjct: 180 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 239
Query: 302 KVKQCVDPKLNN 313
+ C + N
Sbjct: 240 LMNLCWTYDVEN 251
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 125/309 (40%), Gaps = 41/309 (13%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
D+ ++ K +G G YG V+ + K + K DT E F + +
Sbjct: 7 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAA 62
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQ 175
V+ +KH + V+LLG C ++ +F T G+L D L R+ V VL +
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLY-- 116
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTN-QSSDTAARL 234
+A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ + DT
Sbjct: 117 ---MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAP 170
Query: 235 HSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTW 293
+ + APE + + KSDV++FGV+L E+ T G P
Sbjct: 171 AGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-------------- 214
Query: 294 ATPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLN 353
P + +V + ++ + P C Q+ RP+ + +A + +
Sbjct: 215 --PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 272
Query: 354 SKPAGPEAQ 362
E +
Sbjct: 273 ESSISDEVE 281
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 22/219 (10%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
D+ ++ K +G G YG V+ + K + K DT E F + +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAA 61
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQ 175
V+ +KH + V+LLG C ++ +F T G+L D L R+ V VL
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VL---- 113
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
+ +A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ + H
Sbjct: 114 -LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ + APE + + KSDV++FGV+L E+ T
Sbjct: 170 AGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 17/218 (7%)
Query: 67 TSNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
S + +IG G +G V +L AIK L + DF ++ S++ +
Sbjct: 13 ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQF 72
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
H + + L G + +++ ++ GSL L G T Q V + G
Sbjct: 73 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--------FTVIQLVGMLRG 124
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
G+++L + VHRD+ + N+L+ + K++DF ++ D ++TR
Sbjct: 125 IGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI 181
Query: 243 -FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ APE + T SDV+S+G+V+ E+++ G +P
Sbjct: 182 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 125/309 (40%), Gaps = 41/309 (13%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
D+ ++ K +G G YG V+ + K + K DT E F + +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAA 63
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQ 175
V+ +KH + V+LLG C ++ +F T G+L D L R+ V VL +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLY-- 117
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTN-QSSDTAARL 234
+A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ + DT
Sbjct: 118 ---MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAP 171
Query: 235 HSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTW 293
+ + APE + + KSDV++FGV+L E+ T G P
Sbjct: 172 AGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-------------- 215
Query: 294 ATPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLN 353
P + +V + ++ + P C Q+ RP+ + +A + +
Sbjct: 216 --PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 273
Query: 354 SKPAGPEAQ 362
E +
Sbjct: 274 ESSISDEVE 282
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 76 IGEGSYGRV---FYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLG 132
+G G++G V Y AIK L + + + ++ +L + + V L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
C ++ +LV + A G LH L G++ E PV + ++ + + G+++L E
Sbjct: 404 VC-QAEALMLVMEMAGGGPLHKFLVGKR-----EEIPV---SNVAELLHQVSMGMKYLEE 454
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF--GYHAPEY 250
K VHR++ + NVLL + +KI+DF L+ ++ ++ R G + ++APE
Sbjct: 455 K---NFVHRNLAARNVLLVNRHYAKISDFGLS-KALGADDSYYTARSAGKWPLKWYAPEC 510
Query: 251 AMTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ + +SDV+S+GV + E L+ G+KP
Sbjct: 511 INFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 17/218 (7%)
Query: 67 TSNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
S + +IG G +G V +L AIK L + DF ++ S++ +
Sbjct: 7 ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQF 66
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
H + + L G + +++ ++ GSL L G T Q V + G
Sbjct: 67 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--------FTVIQLVGMLRG 118
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
G+++L + VHRD+ + N+L+ + K++DF ++ D ++TR
Sbjct: 119 IGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI 175
Query: 243 -FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ APE + T SDV+S+G+V+ E+++ G +P
Sbjct: 176 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 17/217 (7%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
S + +IG G +G V +L AIK L + DF ++ S++ +
Sbjct: 29 SCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD 88
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + + L G + +++ ++ GSL L G T Q V + G
Sbjct: 89 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--------FTVIQLVGMLRGI 140
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT- 242
G+++L + VHRD+ + N+L+ + K++DF ++ D ++TR
Sbjct: 141 GSGMKYLSDM---SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 197
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ APE + T SDV+S+G+V+ E+++ G +P
Sbjct: 198 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 16/216 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + + L HE+ V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGH 73
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 122
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQ 288
+ + DV+S G+VL +L G P D Q+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 122
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDH 281
+ + DV+S G+VL +L G P D
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 122
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDH 281
+ + DV+S G+VL +L G P D
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 122
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDH 281
+ + DV+S G+VL +L G P D
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 124/308 (40%), Gaps = 39/308 (12%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
D+ ++ K +G G YG V+ + K + K DT E F + +
Sbjct: 210 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAA 265
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQ 175
V+ +KH + V+LLG C ++ +F T G+L D L R+ V VL +
Sbjct: 266 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLY-- 319
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
+A + +E+L +K +HR++ + N L+ ++ K+ADF L+ + H
Sbjct: 320 ---MATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 373
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWA 294
+ + APE + + KSDV++FGV+L E+ T G P
Sbjct: 374 AGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--------------- 417
Query: 295 TPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
P + +V + ++ + P C Q+ RP+ + +A + +
Sbjct: 418 -PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 476
Query: 355 KPAGPEAQ 362
E +
Sbjct: 477 SSISDEVE 484
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 124/308 (40%), Gaps = 39/308 (12%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
D+ ++ K +G G YG V+ + K + K DT E F + +
Sbjct: 252 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAA 307
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQ 175
V+ +KH + V+LLG C ++ +F T G+L D L R+ V VL +
Sbjct: 308 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLY-- 361
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
+A + +E+L +K +HR++ + N L+ ++ K+ADF L+ + H
Sbjct: 362 ---MATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 415
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWA 294
+ + APE + + KSDV++FGV+L E+ T G P
Sbjct: 416 AGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--------------- 459
Query: 295 TPRLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNS 354
P + +V + ++ + P C Q+ RP+ + +A + +
Sbjct: 460 -PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 518
Query: 355 KPAGPEAQ 362
E +
Sbjct: 519 SSISDEVE 526
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 120
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 121 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQ 288
+ + DV+S G+VL +L G P D Q+
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 215
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 124/306 (40%), Gaps = 35/306 (11%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
D+ ++ K +G G YG V+ + K + K DT E F + +
Sbjct: 213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAA 268
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRV 177
V+ +KH + V+LLG C ++ +F T G+L D L R+ + VL +
Sbjct: 269 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLY---- 322
Query: 178 KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHST 237
+A + +E+L +K +HR++ + N L+ ++ K+ADF L+ + H+
Sbjct: 323 -MATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 378
Query: 238 RVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATP 296
+ APE + + KSDV++FGV+L E+ T G P P
Sbjct: 379 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 421
Query: 297 RLSEDKVKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLNSKP 356
+ +V + ++ + P C Q+ RP+ + +A + +
Sbjct: 422 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 481
Query: 357 AGPEAQ 362
E +
Sbjct: 482 ISDEVE 487
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 28/228 (12%)
Query: 66 LTSNFGTKALIGEGSYGRVFYAKLT-DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKH 124
++S+F K+L+GEG+YG V A G AIKK++ P ++ ++ KH
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 125 EHFVELLGY----CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVA 180
E+ + + E+ N + + Q LH V+ + +L+ +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ----------MLSDDHIQYFI 118
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNL--------TNQSSDTAA 232
Y + ++ LH ++HRD++ SN+L+ + K+ DF L + S T
Sbjct: 119 YQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 233 RLHSTRVLGTFGYHAPEYAMT-GQITQKSDVYSFGVVLLELLTGRKPV 279
+ T + T Y APE +T + ++ DV+S G +L EL R+P+
Sbjct: 176 QSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 122
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQ 288
+ + DV+S G+VL +L G P D Q+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 121
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQ 288
+ + DV+S G+VL +L G P D Q+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 28/228 (12%)
Query: 66 LTSNFGTKALIGEGSYGRVFYAKLT-DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKH 124
++S+F K+L+GEG+YG V A G AIKK++ P ++ ++ KH
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 125 EHFVELLGY----CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVA 180
E+ + + E+ N + + Q LH V+ + +L+ +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ----------MLSDDHIQYFI 118
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNL--------TNQSSDTAA 232
Y + ++ LH ++HRD++ SN+L+ + K+ DF L + S T
Sbjct: 119 YQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 233 RLHSTRVLGTFGYHAPEYAMT-GQITQKSDVYSFGVVLLELLTGRKPV 279
+ T + T Y APE +T + ++ DV+S G +L EL R+P+
Sbjct: 176 QSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 121
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQ 288
+ + DV+S G+VL +L G P D Q+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 121
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQ 288
+ + DV+S G+VL +L G P D Q+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 121
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQ 288
+ + DV+S G+VL +L G P D Q+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 121
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQ 288
+ + DV+S G+VL +L G P D Q+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 13/138 (9%)
Query: 142 LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHR 201
+V ++ +L D++H GP +T + ++V A + L F H Q I+HR
Sbjct: 93 IVMEYVDGVTLRDIVHTE--------GP-MTPKRAIEVIADACQALNFSH---QNGIIHR 140
Query: 202 DVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR-VLGTFGYHAPEYAMTGQITQKS 260
DV+ +N+++ K+ DF + +D+ + T V+GT Y +PE A + +S
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 261 DVYSFGVVLLELLTGRKP 278
DVYS G VL E+LTG P
Sbjct: 201 DVYSLGCVLYEVLTGEPP 218
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 122
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQ 288
+ + DV+S G+VL +L G P D Q+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 37/282 (13%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G +G V Y K AIK + S E E F + V+ L HE V+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE--FIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 136 ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQ 195
+ ++ ++ G L + L E Q +++ + +E+L K
Sbjct: 75 KQRPIFIITEYMANGCLLNYLR--------EMRHRFQTQQLLEMCKDVCEAMEYLESK-- 124
Query: 196 PPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSD---TAARLHSTRVLGTFGYHAPEYAM 252
+HRD+ + N L+ D K++DF L+ D T++R V + PE M
Sbjct: 125 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV----RWSPPEVLM 179
Query: 253 TGQITQKSDVYSFGVVLLELLT-GRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKL 311
+ + KSD+++FGV++ E+ + G+ P + R + + + + L
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIYSLGKMPYE----------------RFTNSETAEHIAQGL 223
Query: 312 NNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLLN 353
P C +AD RP I++ + +++
Sbjct: 224 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 121
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQ 288
+ + DV+S G+VL +L G P D Q+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 13/138 (9%)
Query: 142 LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHR 201
+V ++ +L D++H GP +T + ++V A + L F H Q I+HR
Sbjct: 93 IVMEYVDGVTLRDIVHTE--------GP-MTPKRAIEVIADACQALNFSH---QNGIIHR 140
Query: 202 DVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR-VLGTFGYHAPEYAMTGQITQKS 260
DV+ +N+++ K+ DF + +D+ + T V+GT Y +PE A + +S
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 261 DVYSFGVVLLELLTGRKP 278
DVYS G VL E+LTG P
Sbjct: 201 DVYSLGCVLYEVLTGEPP 218
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 122
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDH 281
+ + DV+S G+VL +L G P D
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 13/138 (9%)
Query: 142 LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHR 201
+V ++ +L D++H GP +T + ++V A + L F H Q I+HR
Sbjct: 93 IVMEYVDGVTLRDIVHTE--------GP-MTPKRAIEVIADACQALNFSH---QNGIIHR 140
Query: 202 DVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR-VLGTFGYHAPEYAMTGQITQKS 260
DV+ +N+++ K+ DF + +D+ + T V+GT Y +PE A + +S
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 261 DVYSFGVVLLELLTGRKP 278
DVYS G VL E+LTG P
Sbjct: 201 DVYSLGCVLYEVLTGEPP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 13/138 (9%)
Query: 142 LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHR 201
+V ++ +L D++H GP +T + ++V A + L F H Q I+HR
Sbjct: 93 IVMEYVDGVTLRDIVHTE--------GP-MTPKRAIEVIADACQALNFSH---QNGIIHR 140
Query: 202 DVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR-VLGTFGYHAPEYAMTGQITQKS 260
DV+ +N+++ K+ DF + +D+ + T V+GT Y +PE A + +S
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 261 DVYSFGVVLLELLTGRKP 278
DVYS G VL E+LTG P
Sbjct: 201 DVYSLGCVLYEVLTGEPP 218
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 121
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQ 288
+ + DV+S G+VL +L G P D Q+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 121
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQ 288
+ + DV+S G+VL +L G P D Q+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 121
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQ 288
+ + DV+S G+VL +L G P D Q+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 121
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQ 288
+ + DV+S G+VL +L G P D Q+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQE 216
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 122
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 181
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDH 281
+ + DV+S G+VL +L G P D
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 18/225 (8%)
Query: 76 IGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IG+G+ G V+ A + G AI++++ P+ E ++ V+ K+ + V L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIVNYLDSY 87
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
+ + +V ++ GSL DV+ +G Q V + LEFLH
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEG----------QIAAVCRECLQALEFLHSN- 136
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG 254
++HR+++S N+LL D K+ DF Q + ++ ST V GT + APE
Sbjct: 137 --QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMV-GTPYWMAPEVVTRK 192
Query: 255 QITQKSDVYSFGVVLLELLTGRKPVDHTMP-KGQQSLVTWATPRL 298
K D++S G++ +E++ G P + P + + T TP L
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL 237
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+YG V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 121
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDH 281
+ + DV+S G+VL +L G P D
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 63
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ V+LL N LV++F +M L D + + G P P++ +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDA-SALTGI-PLPLIK-----SYLFQLL 115
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 116 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 170
Query: 245 YHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 63 LNRLTSNFGTKAL-----IGEGSYGRV----FYAKLTDGTPAAIKKL--DTSSAPEPESD 111
L LT G K L +G+GS+G V + A A+K L D S PE D
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 112 FAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL 171
F +++ + L H + + L G + + +V + A +GSL D L +G
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH--------F 118
Query: 172 TWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTN---QSS 228
+ A A+G+ +L K +HRD+ + N+LL KI DF L Q+
Sbjct: 119 LLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175
Query: 229 DTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
D +V F + APE T + SD + FGV L E+ T G++P
Sbjct: 176 DHXVMQEHRKV--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 24/218 (11%)
Query: 75 LIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
++G+G +G+ + + K E + F ++ V+ L+H + ++ +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
+ + ++ G+L ++ K + P W+QRV A A G+ +LH
Sbjct: 77 YKDKRLNFITEYIKGGTLRGII---KSMDSQYP-----WSQRVSFAKDIASGMAYLHSM- 127
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR------------VLGT 242
I+HRD+ S N L+ ++ +ADF L D + R V+G
Sbjct: 128 --NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
+ APE +K DV+SFG+VL E++ GR D
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 13/138 (9%)
Query: 142 LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHR 201
+V ++ +L D++H GP +T + ++V A + L F H Q I+HR
Sbjct: 110 IVMEYVDGVTLRDIVHTE--------GP-MTPKRAIEVIADACQALNFSH---QNGIIHR 157
Query: 202 DVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR-VLGTFGYHAPEYAMTGQITQKS 260
DV+ +N+++ K+ DF + +D+ + T V+GT Y +PE A + +S
Sbjct: 158 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 217
Query: 261 DVYSFGVVLLELLTGRKP 278
DVYS G VL E+LTG P
Sbjct: 218 DVYSLGCVLYEVLTGEPP 235
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P + ++S++ L H
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 64
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ V+LL N LV++F +M L D + + G P P++ +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDA-SALTGI-PLPLIK-----SYLFQLL 116
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 171
Query: 245 YHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 26/233 (11%)
Query: 48 QKALPIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLT-DGTPAAIKKLDTSSAP 106
QKA ++ ++K D+ R++ +G G+ G V + G A K + P
Sbjct: 6 QKA---KVGELKDDDFERISE-------LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKP 55
Query: 107 EPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE 166
+ +L V+ + V G + + GSL VL K +
Sbjct: 56 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRI---- 111
Query: 167 PGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ 226
P +L KV+ +GL +L EK Q I+HRDV+ SN+L+ + K+ DF ++ Q
Sbjct: 112 PEEILG-----KVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQ 164
Query: 227 SSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
D+ A +GT Y APE + +SD++S G+ L+EL GR P+
Sbjct: 165 LIDSMA----NSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPE-PESDFAAQLSVVSRLKHEHFVELLGYC 134
+GEG+YG V+ AK + G A+K++ + E S ++S++ L H + V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 135 MESNNRILVYQFATMGSLHDVLHGRK-GVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
LV++F L VL K G+Q ++ L Y +G+ H
Sbjct: 89 HSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYL---------YQLLRGVAHCH-- 136
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM- 252
Q I+HRD++ N+L+ D K+ADF L ++ R ++ V+ T Y AP+ M
Sbjct: 137 -QHRILHRDLKPQNLLINSDGALKLADFGLA-RAFGIPVRSYTHEVV-TLWYRAPDVLMG 193
Query: 253 TGQITQKSDVYSFGVVLLELLTGR 276
+ + + D++S G + E++TG+
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 25/221 (11%)
Query: 65 RLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRL 122
R +F LIG G +G+VF AK DG IK++ + E E A+L V+ +
Sbjct: 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIV 67
Query: 123 KHEHFVELLGYCMESNNR----------ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLT 172
+ + Y E++++ + +F G+L + R+G + + +
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 173 WNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAA 232
+ Q KG++++H K +++RD++ SN+ L D + KI DF L +
Sbjct: 128 FEQ-------ITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 177
Query: 233 RLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELL 273
R S GT Y +PE + ++ D+Y+ G++L ELL
Sbjct: 178 RXRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPE-PESDFAAQLSVVSRLKHEHFVELLGYC 134
+GEG+YG V+ AK + G A+K++ + E S ++S++ L H + V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 135 MESNNRILVYQFATMGSLHDVLHGRK-GVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
LV++F L VL K G+Q ++ L Y +G+ H
Sbjct: 89 HSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYL---------YQLLRGVAHCH-- 136
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM- 252
Q I+HRD++ N+L+ D K+ADF L ++ R ++ V+ T Y AP+ M
Sbjct: 137 -QHRILHRDLKPQNLLINSDGALKLADFGLA-RAFGIPVRSYTHEVV-TLWYRAPDVLMG 193
Query: 253 TGQITQKSDVYSFGVVLLELLTGR 276
+ + + D++S G + E++TG+
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEH 126
N+ + IG+G++ +V A+ + G A+K +D T P ++ ++ L H +
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVL--HGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
V+L LV ++A+ G + D L HGR + A + Q V
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA----KFRQIVS------ 125
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
+++ H+K IVHRD+++ N+LL D KIADF +N+ + +L + G+
Sbjct: 126 -AVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFT-VGNKLDT--FCGSPP 178
Query: 245 YHAPEYAMTGQITQ-KSDVYSFGVVLLELLTGRKPVD 280
Y APE + + DV+S GV+L L++G P D
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 28/228 (12%)
Query: 66 LTSNFGTKALIGEGSYGRVFYAKLT-DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKH 124
++S+F K+L+GEG+YG V A G AIKK++ P ++ ++ KH
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 125 EHFVELLGY----CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVA 180
E+ + + E+ N + + Q LH V+ + +L+ +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ----------MLSDDHIQYFI 118
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAA-------- 232
Y + ++ LH ++HRD++ SN+L+ + K+ DF L ++AA
Sbjct: 119 YQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 233 RLHSTRVLGTFGYHAPEYAMT-GQITQKSDVYSFGVVLLELLTGRKPV 279
+ + T Y APE +T + ++ DV+S G +L EL R+P+
Sbjct: 176 QSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 63 LNRLTSNFGTKAL-----IGEGSYGRV----FYAKLTDGTPAAIKKL--DTSSAPEPESD 111
L LT G K L +G+GS+G V + A A+K L D S PE D
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 112 FAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL 171
F +++ + L H + + L G + + +V + A +GSL D L +G
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH--------F 118
Query: 172 TWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTN---QSS 228
+ A A+G+ +L K +HRD+ + N+LL KI DF L Q+
Sbjct: 119 LLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175
Query: 229 DTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
D +V F + APE T + SD + FGV L E+ T G++P
Sbjct: 176 DHYVMQEHRKV--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 76 IGEGSYGRV----FYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELL 131
IGEG +G V + + AIK ++ F + + + H H V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G E N ++ + T+G L L RK L + AY + L +L
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKFS--------LDLASLILYAYQLSTALAYLE 128
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYA 251
K VHRD+ + NVL+ + K+ DF L+ D+ S L + APE
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL-PIKWMAPESI 184
Query: 252 MTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ T SDV+ FGV + E+L G KP
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D A +TR Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D A +TR Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 76 IGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IGEGS G V A + G A+KK+D E F ++ ++ H++ V++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFN-EVVIMRDYHHDNVVDMYSSY 111
Query: 135 MESNNRILVYQFATMGSLHDVL-HGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
+ + +V +F G+L D++ H R + Q V + L +LH +
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIATVCLSVLRALSYLHNQ 160
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
++HRD++S ++LL D + K++DF Q S + ++GT + APE
Sbjct: 161 ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK--RKXLVGTPYWMAPEVISR 215
Query: 254 GQITQKSDVYSFGVVLLELLTGRKP 278
+ D++S G++++E++ G P
Sbjct: 216 LPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 134
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D A +TR Y A
Sbjct: 135 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRA 186
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 69 NFGTKALIGEGSYGRVF-YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
+F + +G G+ G VF + G A K + P + +L V+ +
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 128 VELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
V G + + GSL VL G P +L KV+ KGL
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILG-----KVSIAVIKGL 179
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+L EK + I+HRDV+ SN+L+ + K+ DF ++ Q D+ A +GT Y +
Sbjct: 180 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMS 233
Query: 248 PEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
PE + +SD++S G+ L+E+ GR P+
Sbjct: 234 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 99/228 (43%), Gaps = 29/228 (12%)
Query: 66 LTSNFGTKAL-----IGEGSYGRV----FYAKLTDGTPAAIKKL--DTSSAPEPESDFAA 114
LT G K L +G+GS+G V + A A+K L D S PE DF
Sbjct: 1 LTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIR 60
Query: 115 QLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWN 174
+++ + L H + + L G + + +V + A +GSL D L +G
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH--------FLLG 111
Query: 175 QRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTN---QSSDTA 231
+ A A+G+ +L K +HRD+ + N+LL KI DF L Q+ D
Sbjct: 112 TLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHX 168
Query: 232 ARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
+V F + APE T + SD + FGV L E+ T G++P
Sbjct: 169 VMQEHRKV--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEH 126
N+ IG+G++ +V A+ + G AIK +D T P ++ ++ L H +
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVL--HGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
V+L L+ ++A+ G + D L HGR + A + Q V
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS----KFRQIVS------ 122
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
+++ H+K IVHRD+++ N+LL D KIADF +N+ + +L + G+
Sbjct: 123 -AVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGKLDT--FCGSPP 175
Query: 245 YHAPEYAMTGQITQ-KSDVYSFGVVLLELLTGRKPVD 280
Y APE + + DV+S GV+L L++G P D
Sbjct: 176 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 99/228 (43%), Gaps = 29/228 (12%)
Query: 66 LTSNFGTKAL-----IGEGSYGRV----FYAKLTDGTPAAIKKL--DTSSAPEPESDFAA 114
LT G K L +G+GS+G V + A A+K L D S PE DF
Sbjct: 5 LTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIR 64
Query: 115 QLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWN 174
+++ + L H + + L G + + +V + A +GSL D L +G
Sbjct: 65 EVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH--------FLLG 115
Query: 175 QRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTN---QSSDTA 231
+ A A+G+ +L K +HRD+ + N+LL KI DF L Q+ D
Sbjct: 116 TLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 172
Query: 232 ARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
+V F + APE T + SD + FGV L E+ T G++P
Sbjct: 173 VMQEHRKV--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 21/239 (8%)
Query: 52 PIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYA------KLTDGTPAAIKKLDTSSA 105
P ++P E R +FG +G G++G+V A K A+K L S+
Sbjct: 25 PTQLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 82
Query: 106 PEPESDFAAQLSVVSRL-KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH-GRKGVQ 163
++L V+S L H + V LLG C +++ ++ G L + L R
Sbjct: 83 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI 142
Query: 164 GAEPGPVLTWNQRV--------KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFK 215
++ P + + + +Y AKG+ FL K +HRD+ + N+LL
Sbjct: 143 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRI 199
Query: 216 SKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+KI DF L + + + + APE T +SDV+S+G+ L EL +
Sbjct: 200 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 76 IGEGSYGRV----FYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELL 131
IGEG +G V + + AIK ++ F + + + H H V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G E N ++ + T+G L L RK L + AY + L +L
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 128
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYA 251
K VHRD+ + NVL+ + K+ DF L+ D+ S L + APE
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 184
Query: 252 MTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ T SDV+ FGV + E+L G KP
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 76 IGEGSYGRV----FYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELL 131
IGEG +G V + + AIK ++ F + + + H H V+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G E N ++ + T+G L L RK L + AY + L +L
Sbjct: 106 GVITE-NPVWIIMELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 156
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYA 251
K VHRD+ + NVL+ + K+ DF L+ D+ S L + APE
Sbjct: 157 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 212
Query: 252 MTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ T SDV+ FGV + E+L G KP
Sbjct: 213 NFRRFTSASDVWMFGVCMWEILMHGVKP 240
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 76 IGEGSYGRV----FYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELL 131
IGEG +G V + + AIK ++ F + + + H H V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G E N ++ + T+G L L RK L + AY + L +L
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 125
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYA 251
K VHRD+ + NVL+ + K+ DF L+ D+ S L + APE
Sbjct: 126 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 181
Query: 252 MTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ T SDV+ FGV + E+L G KP
Sbjct: 182 NFRRFTSASDVWMFGVCMWEILMHGVKP 209
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 76 IGEGSYGRV----FYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELL 131
IGEG +G V + + AIK ++ F + + + H H V+L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G E N ++ + T+G L L RK L + AY + L +L
Sbjct: 83 GVITE-NPVWIIMELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 133
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYA 251
K VHRD+ + NVL+ + K+ DF L+ D+ S L + APE
Sbjct: 134 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 189
Query: 252 MTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ T SDV+ FGV + E+L G KP
Sbjct: 190 NFRRFTSASDVWMFGVCMWEILMHGVKP 217
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEH 126
N+ IG+G++ +V A+ + G AIK +D T P ++ ++ L H +
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVL--HGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
V+L L+ ++A+ G + D L HGR + A + Q V
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS----KFRQIVS------ 125
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
+++ H+K IVHRD+++ N+LL D KIADF +N+ + +L + G
Sbjct: 126 -AVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGKLDA--FCGAPP 178
Query: 245 YHAPEYAMTGQITQ-KSDVYSFGVVLLELLTGRKPVD 280
Y APE + + DV+S GV+L L++G P D
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 76 IGEGSYGRV----FYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELL 131
IGEG +G V + + AIK ++ F + + + H H V+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G E N ++ + T+G L L RK L + AY + L +L
Sbjct: 81 GVITE-NPVWIIMELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 131
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYA 251
K VHRD+ + NVL+ + K+ DF L+ D+ S L + APE
Sbjct: 132 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 187
Query: 252 MTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ T SDV+ FGV + E+L G KP
Sbjct: 188 NFRRFTSASDVWMFGVCMWEILMHGVKP 215
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 21/239 (8%)
Query: 52 PIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYA------KLTDGTPAAIKKLDTSSA 105
P ++P E R +FG +G G++G+V A K A+K L S+
Sbjct: 32 PTQLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 89
Query: 106 PEPESDFAAQLSVVSRL-KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH-GRKGVQ 163
++L V+S L H + V LLG C +++ ++ G L + L R
Sbjct: 90 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI 149
Query: 164 GAEPGPVLTWNQRV--------KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFK 215
++ P + + + +Y AKG+ FL K +HRD+ + N+LL
Sbjct: 150 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRI 206
Query: 216 SKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+KI DF L + + + + APE T +SDV+S+G+ L EL +
Sbjct: 207 TKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 76 IGEGSYGRV----FYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELL 131
IGEG +G V + + AIK ++ F + + + H H V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G E N ++ + T+G L L RK L + AY + L +L
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 128
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYA 251
K VHRD+ + NVL+ + K+ DF L+ D+ S L + APE
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 184
Query: 252 MTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ T SDV+ FGV + E+L G KP
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 76 IGEGSYGRV----FYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELL 131
IGEG +G V + + AIK ++ F + + + H H V+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G E N ++ + T+G L L RK L + AY + L +L
Sbjct: 80 GVITE-NPVWIIMELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 130
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYA 251
K VHRD+ + NVL+ + K+ DF L+ D+ S L + APE
Sbjct: 131 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 186
Query: 252 MTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ T SDV+ FGV + E+L G KP
Sbjct: 187 NFRRFTSASDVWMFGVCMWEILMHGVKP 214
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 69 NFGTKALIGEGSYGRVF-YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
+F + +G G+ G VF + G A K + P + +L V+ +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 128 VELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
V G + + GSL VL G P +L KV+ KGL
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILG-----KVSIAVIKGL 117
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+L EK + I+HRDV+ SN+L+ + K+ DF ++ Q D+ A +GT Y +
Sbjct: 118 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMS 171
Query: 248 PEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
PE + +SD++S G+ L+E+ GR P+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 76 IGEGSYGRVFYA------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHE-HFV 128
+G G++G+V A K A+K L + ++L ++ + H + V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 129 ELLGYCMESNNRILVY-QFATMGSLHDVLHGRKGVQGAEPGP------VLTWNQRVKVAY 181
LLG C + ++V +F G+L L ++ P LT + ++
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 182 GAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLG 241
AKG+EFL + +HRD+ + N+LL + KI DF L +
Sbjct: 156 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 242 TFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 99/228 (43%), Gaps = 29/228 (12%)
Query: 66 LTSNFGTKAL-----IGEGSYGRV----FYAKLTDGTPAAIKKL--DTSSAPEPESDFAA 114
LT G K L +G+GS+G V + A A+K L D S PE DF
Sbjct: 1 LTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIR 60
Query: 115 QLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWN 174
+++ + L H + + L G + + +V + A +GSL D L +G
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH--------FLLG 111
Query: 175 QRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTN---QSSDTA 231
+ A A+G+ +L K +HRD+ + N+LL KI DF L Q+ D
Sbjct: 112 TLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 168
Query: 232 ARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
+V F + APE T + SD + FGV L E+ T G++P
Sbjct: 169 VMQEHRKV--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 69 NFGTKALIGEGSYGRVF-YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
+F + +G G+ G VF + G A K + P + +L V+ +
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 128 VELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
V G + + GSL VL G P +L KV+ KGL
Sbjct: 94 VGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILG-----KVSIAVIKGL 144
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+L EK + I+HRDV+ SN+L+ + K+ DF ++ Q D+ A +GT Y +
Sbjct: 145 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMS 198
Query: 248 PEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
PE + +SD++S G+ L+E+ GR P+
Sbjct: 199 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 99/228 (43%), Gaps = 29/228 (12%)
Query: 66 LTSNFGTKAL-----IGEGSYGRV----FYAKLTDGTPAAIKKL--DTSSAPEPESDFAA 114
LT G K L +G+GS+G V + A A+K L D S PE DF
Sbjct: 5 LTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIR 64
Query: 115 QLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWN 174
+++ + L H + + L G + + +V + A +GSL D L +G
Sbjct: 65 EVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH--------FLLG 115
Query: 175 QRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTN---QSSDTA 231
+ A A+G+ +L K +HRD+ + N+LL KI DF L Q+ D
Sbjct: 116 TLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 172
Query: 232 ARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
+V F + APE T + SD + FGV L E+ T G++P
Sbjct: 173 VMQEHRKV--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 34/233 (14%)
Query: 65 RLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
R ++F +G G +G VF AK D AIK++ + ++ +++L+
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 124 HEHFVELLGYCMESNN---------RILVY---QFATMGSLHDVLHGRKGVQGAEPGPVL 171
H V +E N ++ +Y Q +L D ++GR ++ E L
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 172 TWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLT---NQSS 228
+ A+ +EFLH K ++HRD++ SN+ D K+ DF L +Q
Sbjct: 122 ------HIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
Query: 229 DTAARL--------HSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELL 273
+ L H+ +V GT Y +PE + K D++S G++L ELL
Sbjct: 173 EEQTVLTPMPAYARHTGQV-GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 21/239 (8%)
Query: 52 PIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYA------KLTDGTPAAIKKLDTSSA 105
P ++P E R +FG +G G++G+V A K A+K L S+
Sbjct: 32 PTQLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 89
Query: 106 PEPESDFAAQLSVVSRL-KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH-GRKGVQ 163
++L V+S L H + V LLG C +++ ++ G L + L R
Sbjct: 90 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI 149
Query: 164 GAEPGPVLTWNQRV--------KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFK 215
++ P + + + +Y AKG+ FL K +HRD+ + N+LL
Sbjct: 150 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRI 206
Query: 216 SKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+KI DF L + + + + APE T +SDV+S+G+ L EL +
Sbjct: 207 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 69 NFGTKALIGEGSYGRVF-YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
+F + +G G+ G VF + G A K + P + +L V+ +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 128 VELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
V G + + GSL VL G P +L KV+ KGL
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILG-----KVSIAVIKGL 117
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+L EK + I+HRDV+ SN+L+ + K+ DF ++ Q D+ A +GT Y +
Sbjct: 118 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMS 171
Query: 248 PEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
PE + +SD++S G+ L+E+ GR P+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 69 NFGTKALIGEGSYGRVF-YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
+F + +G G+ G VF + G A K + P + +L V+ +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 128 VELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
V G + + GSL VL G P +L KV+ KGL
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILG-----KVSIAVIKGL 117
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+L EK + I+HRDV+ SN+L+ + K+ DF ++ Q D+ A +GT Y +
Sbjct: 118 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMS 171
Query: 248 PEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
PE + +SD++S G+ L+E+ GR P+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 99/228 (43%), Gaps = 29/228 (12%)
Query: 66 LTSNFGTKAL-----IGEGSYGRV----FYAKLTDGTPAAIKKL--DTSSAPEPESDFAA 114
LT G K L +G+GS+G V + A A+K L D S PE DF
Sbjct: 1 LTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIR 60
Query: 115 QLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWN 174
+++ + L H + + L G + + +V + A +GSL D L +G
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH--------FLLG 111
Query: 175 QRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTN---QSSDTA 231
+ A A+G+ +L K +HRD+ + N+LL KI DF L Q+ D
Sbjct: 112 TLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 168
Query: 232 ARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
+V F + APE T + SD + FGV L E+ T G++P
Sbjct: 169 VMQEHRKV--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
IG G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 143
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 144 KYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRA 195
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 34/216 (15%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G YG V+ L G A+K SS E ++ L+H++ + + M
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIF--SSRDEQSWFRETEIYNTVLLRHDNILGFIASDM 72
Query: 136 ESNNR----ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
S N L+ + GSL+D L Q EP L ++A AA GL LH
Sbjct: 73 TSRNSSTQLWLITHYHEHGSLYDFLQR----QTLEPHLAL------RLAVSAACGLAHLH 122
Query: 192 EKV-----QPPIVHRDVRSSNVLLFDDFKSKIADFNLT---NQSSDTAARLHSTRVLGTF 243
++ +P I HRD +S NVL+ + + IAD L +Q SD ++ RV GT
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTK 181
Query: 244 GYHAPEYAMTGQIT-------QKSDVYSFGVVLLEL 272
Y APE + QI + +D+++FG+VL E+
Sbjct: 182 RYMAPE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 31/283 (10%)
Query: 52 PIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYA------KLTDGTPAAIKKLDTSSA 105
P ++P E R +FG +G G++G+V A K A+K L S+
Sbjct: 9 PTQLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 66
Query: 106 PEPESDFAAQLSVVSRL-KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH-GRKGVQ 163
++L V+S L H + V LLG C +++ ++ G L + L R
Sbjct: 67 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI 126
Query: 164 GAEPGPVLTWNQRV--------KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFK 215
++ P + + + +Y AKG+ FL K +HRD+ + N+LL
Sbjct: 127 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRI 183
Query: 216 SKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
+KI DF L + + + + APE T +SDV+S+G+ L EL +
Sbjct: 184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 243
Query: 276 RK------PVDHTMPK----GQQSLVTWATPRLSEDKVKQCVD 308
PVD K G + L P D +K C D
Sbjct: 244 GSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWD 286
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 145
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L ++D T + T Y A
Sbjct: 146 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM-----TGYVATRWYRA 197
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 21/239 (8%)
Query: 52 PIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYA------KLTDGTPAAIKKLDTSSA 105
P ++P E R +FG +G G++G+V A K A+K L S+
Sbjct: 27 PTQLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 84
Query: 106 PEPESDFAAQLSVVSRL-KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH-GRKGVQ 163
++L V+S L H + V LLG C +++ ++ G L + L R
Sbjct: 85 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI 144
Query: 164 GAEPGPVLTWNQRV--------KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFK 215
++ P + + + +Y AKG+ FL K +HRD+ + N+LL
Sbjct: 145 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRI 201
Query: 216 SKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+KI DF L + + + + APE T +SDV+S+G+ L EL +
Sbjct: 202 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 111/249 (44%), Gaps = 32/249 (12%)
Query: 41 VVKTGTPQKALPIEIPQIKLDELNR----LTSNFGTKALIGEGSYGRVFYAKLTD-GTPA 95
+V G+ + E P ELN+ + + + +G G+YG V A T G
Sbjct: 14 LVPRGSHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRV 73
Query: 96 AIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL-----GYCMESNNRILVYQFAT 148
A+KKL S + + +L ++ +KHE+ + LL +E N + +
Sbjct: 74 AVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 132
Query: 149 MGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNV 208
L++++ +K LT + + Y +GL+++H I+HRD++ SN+
Sbjct: 133 GADLNNIVKCQK----------LTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNL 179
Query: 209 LLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG-QITQKSDVYSFGV 267
+ +D + KI DF L + D +TR Y APE + Q D++S G
Sbjct: 180 AVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGC 234
Query: 268 VLLELLTGR 276
++ ELLTGR
Sbjct: 235 IMAELLTGR 243
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 145
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L ++D T + T Y A
Sbjct: 146 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM-----TGYVATRWYRA 197
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 102/234 (43%), Gaps = 38/234 (16%)
Query: 65 RLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRL 122
R +F LIG G +G+VF AK DG I+++ + E E A+L V+ +
Sbjct: 9 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIV 68
Query: 123 KHEHFVELLGY-------CMESNNR----------------ILVYQFATMGSLHDVLHGR 159
+ + Y +ES++ + +F G+L + R
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 160 KGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIA 219
+G + + + + Q KG++++H K ++HRD++ SN+ L D + KI
Sbjct: 129 RGEKLDKVLALELFEQ-------ITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIG 178
Query: 220 DFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELL 273
DF L + R TR GT Y +PE + ++ D+Y+ G++L ELL
Sbjct: 179 DFGLVTSLKNDGKR---TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 32/236 (13%)
Query: 54 EIPQIKLDELNR----LTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAP 106
E P ELN+ + + A +G G+YG V A T G A+KKL S
Sbjct: 14 ERPTFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII 73
Query: 107 EPESDFAAQLSVVSRLKHEHFVELL-----GYCMESNNRILVYQFATMGSLHDVLHGRKG 161
+ + +L ++ +KHE+ + LL +E N + + L++++ +K
Sbjct: 74 HAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK- 131
Query: 162 VQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADF 221
LT + + Y +GL+++H I+HRD++ SN+ + +D + KI DF
Sbjct: 132 ---------LTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 179
Query: 222 NLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
L + D T + T Y APE + Q D++S G ++ ELLTGR
Sbjct: 180 GLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 69 NFGTKALIGEGSYGRVF-YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
+F + +G G+ G VF + G A K + P + +L V+ +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 128 VELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
V G + + GSL VL G P +L KV+ KGL
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILG-----KVSIAVIKGL 117
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+L EK + I+HRDV+ SN+L+ + K+ DF ++ Q D+ A +GT Y +
Sbjct: 118 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMS 171
Query: 248 PEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
PE + +SD++S G+ L+E+ GR P+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 69 NFGTKALIGEGSYGRVF-YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
+F + +G G+ G VF + G A K + P + +L V+ +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 128 VELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
V G + + GSL VL G P +L KV+ KGL
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILG-----KVSIAVIKGL 117
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+L EK + I+HRDV+ SN+L+ + K+ DF ++ Q D+ A +GT Y +
Sbjct: 118 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMS 171
Query: 248 PEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
PE + +SD++S G+ L+E+ GR P+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 76 IGEGSYGRV----FYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELL 131
IGEG +G V + + AIK ++ F + + + H H V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G E N ++ + T+G L L RK L + AY + L +L
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRKFS--------LDLASLILYAYQLSTALAYLE 508
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYA 251
K VHRD+ + NVL+ + K+ DF L+ D+ S L + APE
Sbjct: 509 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 564
Query: 252 MTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ T SDV+ FGV + E+L G KP
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 145
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L ++D +TR Y A
Sbjct: 146 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRA 197
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 64
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ V+LL N LV++F +M L + + G P P++ +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDA-SALTGI-PLPLIK-----SYLFQLL 116
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 117 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 171
Query: 245 YHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 149
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 150 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 201
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 62
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ V+LL N LV++F +M L + + G P P++ +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDA-SALTGI-PLPLIK-----SYLFQLL 114
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 115 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 169
Query: 245 YHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 143
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 144 KYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRA 195
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+ G V A ++T+ A+K +D A + + ++ + L HE+ V+ G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E N + L ++ + G L D + G+ EP ++Q + G+ +LH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLM-------AGVVYLH-- 121
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT 253
I HRD++ N+LL + KI+DF L ++ GT Y APE
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 254 GQI-TQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQ 288
+ + DV+S G+VL +L G P D Q+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 32/212 (15%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAA----QLSVVSRLKHEHFVEL 130
+G G+YG V A T G A+KKL S P A +L ++ +KHE+ + L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKL---SKPFQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 131 L-----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAK 185
L +E N + + L++++ +K LT + + Y +
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILR 148
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
GL+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y
Sbjct: 149 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 200
Query: 246 HAPEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
APE + Q D++S G ++ ELLTGR
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 149
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 150 KYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRA 201
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D T + T Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM-----TGYVATRWYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 150
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 151 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 202
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 150
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 151 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 202
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 158
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 159 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 210
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 34/222 (15%)
Query: 70 FGTKALIGEGSYGRVFYAK---------LTDGTPAAIKKLDTSSAPEPESDFAAQLSVVS 120
+ + +GEGS+G+V A L + +KK D E E +S +
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVERE------ISYLK 64
Query: 121 RLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVA 180
L+H H ++L + ++V ++A G L D + +K + E + Q++ A
Sbjct: 65 LLRHPHIIKLYDVITTPTDIVMVIEYAG-GELFDYIVEKKRMTEDEGR---RFFQQIICA 120
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
+E+ H + IVHRD++ N+LL D+ KIADF L+N +D S
Sbjct: 121 ------IEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC--- 168
Query: 241 GTFGYHAPEYAMTGQITQ--KSDVYSFGVVLLELLTGRKPVD 280
G+ Y APE + G++ + DV+S G+VL +L GR P D
Sbjct: 169 GSPNYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 140
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 141 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 192
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 145
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 146 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 197
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 157
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 158 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 209
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 140
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D T + T Y A
Sbjct: 141 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TGYVATRWYRA 192
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 140
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 141 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 192
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 152
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + T + GT Y PE
Sbjct: 153 KR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIE 205
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 206 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 143
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 144 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 195
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D T + T Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TGXVATRWYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 87
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 137
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 138 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 189
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 86/208 (41%), Gaps = 18/208 (8%)
Query: 76 IGEGSYGRV----FYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELL 131
IGEG +G V + + AIK ++ F + + + H H V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G E N ++ + T+G L L RK L + AY + L +L
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKFS--------LDLASLILYAYQLSTALAYLE 128
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYA 251
K VHRD+ + NVL+ K+ DF L+ D+ S L + APE
Sbjct: 129 SK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 184
Query: 252 MTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ T SDV+ FGV + E+L G KP
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 144
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D T + T Y A
Sbjct: 145 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TGYVATRWYRA 196
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 23/227 (10%)
Query: 54 EIPQIKLDELNRLTSNFGTKALIGEGSYGRVF-YAKLTDGTPAAIKKLDTSSAPEPESDF 112
++ ++K D+ +++ +G G+ G VF + G A K + P +
Sbjct: 18 KVGELKDDDFEKISE-------LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI 70
Query: 113 AAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLT 172
+L V+ + V G + + GSL VL G P +L
Sbjct: 71 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILG 126
Query: 173 WNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAA 232
KV+ KGL +L EK + I+HRDV+ SN+L+ + K+ DF ++ Q D+ A
Sbjct: 127 -----KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 179
Query: 233 RLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
+GT Y +PE + +SD++S G+ L+E+ GR P+
Sbjct: 180 ----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 86
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 136
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 137 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 188
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 157
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D T + T Y A
Sbjct: 158 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TGYVATRWYRA 209
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 143
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 144 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 195
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 135
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 136 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 187
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 158
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D T + T Y A
Sbjct: 159 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TGYVATRWYRA 210
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 134
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 135 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 186
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 69 NFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTS--SAPEPESDFAAQLSVVSRLKHE 125
N+ +GEGS+G+V A T G A+K ++ + + + ++S + L+H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAK 185
H ++L + I+V ++A L D + R + E + Q++ A
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDKMSEQEAR---RFFQQIISA----- 115
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
+E+ H + IVHRD++ N+LL + KIADF L+N +D S G+ Y
Sbjct: 116 -VEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 168
Query: 246 HAPEYAMTGQITQ--KSDVYSFGVVLLELLTGRKPVD 280
APE ++G++ + DV+S GV+L +L R P D
Sbjct: 169 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 76 IGEGSYGRVFYA------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHE-HFV 128
+G G++G+V A K A+K L + ++L ++ + H + V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 129 ELLGYCMESNNRILVY-QFATMGSLHDVLHGRKG-VQGAEPGPV----LTWNQRVKVAYG 182
LLG C + ++V +F G+L L ++ +P + LT + ++
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
AKG+EFL + +HRD+ + N+LL + KI DF L +
Sbjct: 157 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 135
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 136 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 187
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D T + T Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TGYVATRWYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 23/210 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEP---ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ + K+ + E E ++ + S L+H + + L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y +S L+ ++A +G+++ L +T A L + H
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 126
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ--SSDTAARLHSTRVLGTFGYHAPEY 250
K ++HRD++ N+LL + KIADF + SS AA + GT Y PE
Sbjct: 127 K---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA------LCGTLDYLPPEM 177
Query: 251 AMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 158
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 159 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----WYRA 210
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 69 NFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTS--SAPEPESDFAAQLSVVSRLKHE 125
N+ +GEGS+G+V A T G A+K ++ + + + ++S + L+H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAK 185
H ++L + I+V ++A L D + R + E + Q++ A
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDKMSEQEAR---RFFQQIISA----- 119
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
+E+ H + IVHRD++ N+LL + KIADF L+N +D S G+ Y
Sbjct: 120 -VEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 172
Query: 246 HAPEYAMTGQITQ--KSDVYSFGVVLLELLTGRKPVD 280
APE ++G++ + DV+S GV+L +L R P D
Sbjct: 173 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 140
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 141 KYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRA 192
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 69 NFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTS--SAPEPESDFAAQLSVVSRLKHE 125
N+ +GEGS+G+V A T G A+K ++ + + + ++S + L+H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAK 185
H ++L + I+V ++A L D + R + E + Q++ A
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDKMSEQEAR---RFFQQIISA----- 125
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
+E+ H + IVHRD++ N+LL + KIADF L+N +D S G+ Y
Sbjct: 126 -VEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 178
Query: 246 HAPEYAMTGQITQ--KSDVYSFGVVLLELLTGRKPVD 280
APE ++G++ + DV+S GV+L +L R P D
Sbjct: 179 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 18/218 (8%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVF---YAKLTDGTPAAIKKLDTSSAPEPESDFAAQL 116
+D+ ++ K +G G YG V+ + K + K DT E F +
Sbjct: 24 MDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE----FLKEA 79
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
+V+ +KH + V+LLG C +V ++ G+L D L R+ + VL
Sbjct: 80 AVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL--RECNREEVTAVVL----- 132
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
+ +A + +E+L +K +HRD+ + N L+ ++ K+ADF L+ + H+
Sbjct: 133 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHA 189
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE + KSDV++FGV+L E+ T
Sbjct: 190 GAKF-PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 161
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 162 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WYRA 213
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 126
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + T + GT Y PE
Sbjct: 127 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTELCGTLDYLPPEMIE 179
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 69 NFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTS--SAPEPESDFAAQLSVVSRLKHE 125
N+ +GEGS+G+V A T G A+K ++ + + + ++S + L+H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAK 185
H ++L + I+V ++A L D + R + E + Q++ A
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDKMSEQEAR---RFFQQIISA----- 124
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
+E+ H + IVHRD++ N+LL + KIADF L+N +D S G+ Y
Sbjct: 125 -VEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 177
Query: 246 HAPEYAMTGQITQ--KSDVYSFGVVLLELLTGRKPVD 280
APE ++G++ + DV+S GV+L +L R P D
Sbjct: 178 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 144
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D T + T Y A
Sbjct: 145 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TGYVATRWYRA 196
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 134
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D T + T Y A
Sbjct: 135 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TGYVATRWYRA 186
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 61
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 111
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R ++ V+ T
Sbjct: 112 LLQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-T 166
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 143
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + T + GT Y PE
Sbjct: 144 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIE 196
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 197 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 144
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D T + T Y A
Sbjct: 145 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TGYVATRWYRA 196
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 11/212 (5%)
Query: 67 TSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHE 125
+S F +G G+Y V+ T G A+K++ S S ++S++ LKHE
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHE 63
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAK 185
+ V L N LV++F L + R G P L N + +
Sbjct: 64 NIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSR--TVGNTPRG-LELNLVKYFQWQLLQ 119
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
GL F HE I+HRD++ N+L+ + K+ DF L ++ S+ V+ T Y
Sbjct: 120 GLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLA-RAFGIPVNTFSSEVV-TLWY 174
Query: 246 HAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
AP+ M + S D++S G +L E++TG+
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 102/240 (42%), Gaps = 20/240 (8%)
Query: 45 GTPQKALPI-EIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTS 103
G+ K+ P+ EIP + +D R + +G+G + + + D K+
Sbjct: 4 GSDPKSAPLKEIPDVLVDP--RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPK 61
Query: 104 SA---PEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRK 160
S P + + ++++ L + H V G+ + + +V + SL ++ RK
Sbjct: 62 SMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRK 121
Query: 161 GVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIAD 220
V EP Q ++ G+++LH ++HRD++ N+ L DD KI D
Sbjct: 122 AV--TEPEARYFMRQTIQ-------GVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGD 169
Query: 221 FNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
F L + R + GT Y APE + + D++S G +L LL G+ P +
Sbjct: 170 FGLATKIEFDGER--KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D T + T Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEM-----TGYVATRWYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSR 121
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++
Sbjct: 8 FMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKE 65
Query: 122 LKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKV 179
L H + V+LL N LV++F LH L P P++
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SY 115
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
+ +GL F H ++HRD++ N+L+ + K+ADF L ++ R ++ V
Sbjct: 116 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEV 171
Query: 240 LGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
+ T Y APE + + + D++S G + E++T R
Sbjct: 172 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 76 IGEGSYGRVFYA------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHE-HFV 128
+G G++G+V A K A+K L + ++L ++ + H + V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 129 ELLGYCMESNNRILVY-QFATMGSLHDVLHGRKG-VQGAEPGP------VLTWNQRVKVA 180
LLG C + ++V +F G+L L ++ + P LT + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
+ AKG+EFL + +HRD+ + N+LL + KI DF L +
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 144
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 145 KYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRA 196
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEP---ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ K+ + E E ++ + S L+H + + L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 126
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + T + GT Y PE
Sbjct: 127 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIE 179
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 131
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + T + GT Y PE
Sbjct: 132 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIE 184
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 126
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + T + GT Y PE
Sbjct: 127 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPEMIE 179
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 61
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 111
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R ++ V+ T
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-T 166
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSR 121
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++
Sbjct: 8 FMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKE 65
Query: 122 LKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKV 179
L H + V+LL N LV++F LH L P P++
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SY 115
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRV 239
+ +GL F H ++HRD++ N+L+ + K+ADF L ++ R ++ V
Sbjct: 116 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEV 171
Query: 240 LGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
+ T Y APE + + + D++S G + E++T R
Sbjct: 172 V-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 60
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 110
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R ++ V+ T
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-T 165
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 61
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ V+LL N LV++F L D + + G P P++ +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDA-SALTGI-PLPLIK-----SYLFQLL 113
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 168
Query: 245 YHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 29/230 (12%)
Query: 57 QIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTP----AAIKKLDTSSAPEPESDF 112
QIKL +F ++G+GS+G+VF A+ A+KK + E
Sbjct: 12 QIKLK-----IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTM 66
Query: 113 AAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLT 172
+ + +H + N V ++ G L + H +Q +
Sbjct: 67 VEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYH----IQSCHKFDL-- 118
Query: 173 WNQRVKVAYGAAK---GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSD 229
+ + AA+ GL+FLH K IV+RD++ N+LL D KIADF + ++
Sbjct: 119 ----SRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENML 171
Query: 230 TAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
A+ + GT Y APE + + D +SFGV+L E+L G+ P
Sbjct: 172 GDAK--TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 32/236 (13%)
Query: 54 EIPQIKLDELNR----LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDT--SSAP 106
E P ELN+ + + T + +G G+YG V + + G A+KKL S
Sbjct: 33 ERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSII 92
Query: 107 EPESDFAAQLSVVSRLKHEHFVELL-----GYCMESNNRILVYQFATMGSLHDVLHGRKG 161
+ + +L ++ +KHE+ + LL +E N + + L++++ +K
Sbjct: 93 HAKRTYR-ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK- 150
Query: 162 VQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADF 221
LT + + Y +GL+++H I+HRD++ SN+ + +D + KI DF
Sbjct: 151 ---------LTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 198
Query: 222 NLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
L + D T + T Y APE + D++S G ++ ELLTGR
Sbjct: 199 GLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 27/225 (12%)
Query: 62 ELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVS 120
E+N L N G +G G+ G+V+ + G A+K++ S E L VV
Sbjct: 23 EINDL-ENLGE---MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVL 78
Query: 121 RLKHE--HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVK 178
+ H+ + V+ G + + + + + MG+ + L +K +QG P +L K
Sbjct: 79 K-SHDCPYIVQCFGTFITNTDVFIAMEL--MGTCAEKL--KKRMQGPIPERILG-----K 128
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR 238
+ K L +L EK ++HRDV+ SN+LL + + K+ DF ++ + D A+ R
Sbjct: 129 MTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK---DR 183
Query: 239 VLGTFGYHAPEYAMTGQITQ-----KSDVYSFGVVLLELLTGRKP 278
G Y APE T+ ++DV+S G+ L+EL TG+ P
Sbjct: 184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 61
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 111
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R ++ V+ T
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-T 166
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 167 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 129
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + T + GT Y PE
Sbjct: 130 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIE 182
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEP---ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ K+ + E E ++ + S L+H + + L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 126
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + T + GT Y PE
Sbjct: 127 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTXLCGTLDYLPPEMIE 179
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 60
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 110
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R ++ V+ T
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-T 165
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 16/211 (7%)
Query: 69 NFGTKALIGEGSYGRVF-YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
+F + +G G+ G VF + G A K + P + +L V+ +
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 128 VELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
V G + + GSL VL G P +L KV+ KGL
Sbjct: 70 VGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILG-----KVSIAVIKGL 120
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+L EK + I+HRDV+ SN+L+ + K+ DF ++ Q D A +GT Y +
Sbjct: 121 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMA----NEFVGTRSYMS 174
Query: 248 PEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
PE + +SD++S G+ L+E+ GR P
Sbjct: 175 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 65
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 115
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R ++ V+ T
Sbjct: 116 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-T 170
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 126
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + T + GT Y PE
Sbjct: 127 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPEMIE 179
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 61
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 111
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R ++ V+ T
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-T 166
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 62
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 112
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R ++ V+ T
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-T 167
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 86/208 (41%), Gaps = 18/208 (8%)
Query: 76 IGEGSYGRV----FYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELL 131
IGEG +G V + + AIK ++ F + + + H H V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
G E N ++ + T+G L L RK L + AY + L +L
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRKFS--------LDLASLILYAYQLSTALAYLE 508
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYA 251
K VHRD+ + NVL+ K+ DF L+ D+ S L + APE
Sbjct: 509 SK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 564
Query: 252 MTGQITQKSDVYSFGVVLLELLT-GRKP 278
+ T SDV+ FGV + E+L G KP
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 127
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + T + GT Y PE
Sbjct: 128 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPEMIE 180
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 19/237 (8%)
Query: 47 PQKALPIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSA- 105
P+ A EIP + +D R + +G+G + + + D K+ S
Sbjct: 23 PKSAPLKEIPDVLVDP--RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSML 80
Query: 106 --PEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQ 163
P + + ++++ L + H V G+ + + +V + SL ++ RK V
Sbjct: 81 LKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAV- 139
Query: 164 GAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNL 223
EP Q ++ G+++LH ++HRD++ N+ L DD KI DF L
Sbjct: 140 -TEPEARYFMRQTIQ-------GVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGL 188
Query: 224 TNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
+ R + GT Y APE + + D++S G +L LL G+ P +
Sbjct: 189 ATKIEFDGER--KKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 105/239 (43%), Gaps = 25/239 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 126 HFVELLGYCMESNNRILV-YQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA- 183
FV+L +C + + ++ +A G L + RK + ++++ Y A
Sbjct: 98 FFVKLY-FCFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAE 145
Query: 184 -AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 146 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED 301
Y +PE + SD+++ G ++ +L+ G P G + L+ +L D
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 257
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 131
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + T + GT Y PE
Sbjct: 132 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPEMIE 184
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 76 IGEGSYGRVFYA------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHE-HFV 128
+G G++G+V A K A+K L + ++L ++ + H + V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 129 ELLGYCMESNNRILVY-QFATMGSLHDVLHGRKG-VQGAEPGP------VLTWNQRVKVA 180
LLG C + ++V +F G+L L ++ + P LT + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
+ AKG+EFL + +HRD+ + N+LL + KI DF L +
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 66 LTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPE-SDFAAQLSVVSRLK 123
+ ++G+GS+G V K A+K ++ +SA + S ++ ++ +L
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + ++L +S++ +V + T G L D + RK + ++
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK---------QV 130
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFD---DFKSKIADFNLTN---QSSDTAARLHST 237
G+ ++H + IVHRD++ N+LL D KI DF L+ Q++ R+
Sbjct: 131 FSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--- 184
Query: 238 RVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
GT Y APE + G +K DV+S GV+L LL+G P
Sbjct: 185 ---GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 125
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + T + GT Y PE
Sbjct: 126 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIE 178
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 179 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 19/237 (8%)
Query: 47 PQKALPIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSA- 105
P+ A EIP + +D R + +G+G + + + D K+ S
Sbjct: 23 PKSAPLKEIPDVLVDP--RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSML 80
Query: 106 --PEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQ 163
P + + ++++ L + H V G+ + + +V + SL ++ RK V
Sbjct: 81 LKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAV- 139
Query: 164 GAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNL 223
EP Q ++ G+++LH ++HRD++ N+ L DD KI DF L
Sbjct: 140 -TEPEARYFMRQTIQ-------GVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGL 188
Query: 224 TNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
+ R + + GT Y APE + + D++S G +L LL G+ P +
Sbjct: 189 ATKIEFDGERKKT--LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 76 IGEGSYGRVFYA------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHE-HFV 128
+G G++G+V A K A+K L + ++L ++ + H + V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 129 ELLGYCMESNNRILVY-QFATMGSLHDVLHGRKG-VQGAEPGP------VLTWNQRVKVA 180
LLG C + ++V +F G+L L ++ + P LT + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
+ AKG+EFL + +HRD+ + N+LL + KI DF L +
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 76 IGEGSYGRVFYA------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHE-HFV 128
+G G++G+V A K A+K L + ++L ++ + H + V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 129 ELLGYCMESNNRILVY-QFATMGSLHDVLHGRKG-VQGAEPGP------VLTWNQRVKVA 180
LLG C + ++V +F G+L L ++ + P LT + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
+ AKG+EFL + +HRD+ + N+LL + KI DF L +
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 131
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + T + GT Y PE
Sbjct: 132 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEXIE 184
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 185 GRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 66 LTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPE-SDFAAQLSVVSRLK 123
+ ++G+GS+G V K A+K ++ +SA + S ++ ++ +L
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + ++L +S++ +V + T G L D + RK + ++
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK---------QV 130
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFD---DFKSKIADFNLTN---QSSDTAARLHST 237
G+ ++H + IVHRD++ N+LL D KI DF L+ Q++ R+
Sbjct: 131 FSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--- 184
Query: 238 RVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
GT Y APE + G +K DV+S GV+L LL+G P
Sbjct: 185 ---GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 76 IGEGSYGRVFYA------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHE-HFV 128
+G G++G+V A K A+K L + ++L ++ + H + V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 129 ELLGYCMESNNRILVY-QFATMGSLHDVLHGRKG-VQGAEPGP------VLTWNQRVKVA 180
LLG C + ++V +F G+L L ++ + P LT + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
+ AKG+EFL + +HRD+ + N+LL + KI DF L +
Sbjct: 157 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ +
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 130
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + T + GT Y PE
Sbjct: 131 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIE 183
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 22/214 (10%)
Query: 76 IGEGSYGRVFYA------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHE-HFV 128
+G G++G+V A K A+K L + ++L ++ + H + V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 129 ELLGYCMESNNRILVY-QFATMGSLHDVLHGRKGVQGAEPGP-------VLTWNQRVKVA 180
LLG C + ++V +F G+L L ++ E P LT + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN----EFVPYKDLYKDFLTLEHLICYS 150
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
+ AKG+EFL + +HRD+ + N+LL + KI DF L +
Sbjct: 151 FQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 207
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ +
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 19/237 (8%)
Query: 47 PQKALPIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSA- 105
P+ A EIP + +D R + +G+G + + + D K+ S
Sbjct: 23 PKSAPLKEIPDVLVDP--RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSML 80
Query: 106 --PEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQ 163
P + + ++++ L + H V G+ + + +V + SL ++ RK V
Sbjct: 81 LKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAV- 139
Query: 164 GAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNL 223
EP Q ++ G+++LH ++HRD++ N+ L DD KI DF L
Sbjct: 140 -TEPEARYFMRQTIQ-------GVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGL 188
Query: 224 TNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
+ R + GT Y APE + + D++S G +L LL G+ P +
Sbjct: 189 ATKIEFDGER--KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI D+ L + D +TR Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ K LT + + Y +GL
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK----------LTDDHVQFLIYQILRGL 134
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI DF L + D +TR Y A
Sbjct: 135 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 186
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 76 IGEGSYGRVFYA------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHE-HFV 128
+G G++G+V A K A+K L + ++L ++ + H + V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 129 ELLGYCMESNNRILVY-QFATMGSLHDVLHGRKG-VQGAEPGP------VLTWNQRVKVA 180
LLG C + ++V +F G+L L ++ + P LT + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
+ AKG+EFL + +HRD+ + N+LL + KI DF L +
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 129
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + T + GT Y PE
Sbjct: 130 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIE 182
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 19/230 (8%)
Query: 54 EIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSS---APEPES 110
EIP++ +D +R +G+G + + F D K+ S P
Sbjct: 9 EIPEVLVDPRSRRRYV--RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 66
Query: 111 DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPV 170
+ ++S+ L H+H V G+ +++ +V + SL ++ RK + EP
Sbjct: 67 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL--TEPEAR 124
Query: 171 LTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDT 230
Q V G ++LH ++HRD++ N+ L +D + KI DF L +
Sbjct: 125 YYLRQIVL-------GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 174
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
R + GT Y APE + + DV+S G ++ LL G+ P +
Sbjct: 175 GER--KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 22/214 (10%)
Query: 76 IGEGSYGRVFYA------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHE-HFV 128
+G G++G+V A K A+K L + ++L ++ + H + V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 129 ELLGYCMESNNRILVY-QFATMGSLHDVLHGRKGVQGAEPGP-------VLTWNQRVKVA 180
LLG C + ++V +F G+L L ++ E P LT + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN----EFVPYKDLYKDFLTLEHLIXYS 150
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
+ AKG+EFL + +HRD+ + N+LL + KI DF L +
Sbjct: 151 FQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDAR 207
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ +
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 76 IGEGSYGRV---FYAKLTDGTPA--AIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D T A A+K+L S P+ + DF ++ ++ L + V+
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 131 LG--YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G Y + LV ++ G L D L + A +L ++ ++ KG+E
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA--SRLLLYSSQI------CKGME 129
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT--FGYH 246
+L + VHRD+ + N+L+ + KIADF L + R G ++
Sbjct: 130 YLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLP-LDKDYYVVREPGQSPIFWY 185
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE +++SDV+SFGVVL EL T
Sbjct: 186 APESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 61
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 111
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-T 166
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 65
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 115
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 116 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-T 170
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 63
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 113
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-T 168
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 61
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 111
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-T 166
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 63
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 113
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-T 168
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 29/230 (12%)
Query: 57 QIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTP----AAIKKLDTSSAPEPESDF 112
QIKL +F ++G+GS+G+VF A+ A+KK + E
Sbjct: 11 QIKLK-----IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTM 65
Query: 113 AAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLT 172
+ + +H + N V ++ G L + H +Q +
Sbjct: 66 VEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYH----IQSCHKFDL-- 117
Query: 173 WNQRVKVAYGAAK---GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSD 229
+ + AA+ GL+FLH K IV+RD++ N+LL D KIADF + ++
Sbjct: 118 ----SRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170
Query: 230 TAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
A+ + GT Y APE + + D +SFGV+L E+L G+ P
Sbjct: 171 GDAK--TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 61
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 111
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-T 166
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIK-KLDTSSAPEPESDFAAQLSVVSRLKHE 125
NF IGEG+YG V+ A KLT A K +LDT + P S ++S++ L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVP-STAIREISLLKELNHP 62
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYGA 183
+ V+LL N LV++F LH L P P++ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 112
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
+GL F H ++HRD++ N+L+ + K+ADF L ++ R ++ V+ T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 167
Query: 244 GYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 76 IGEGSYGRV---FYAKLTDGTPA--AIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D T A A+K+L S P+ + DF ++ ++ L + V+
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 131 LG--YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G Y LV ++ G L D L + A +L ++ ++ KG+E
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDA--SRLLLYSSQI------CKGME 125
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTFGYHA 247
+L + VHRD+ + N+L+ + KIADF L D + ++A
Sbjct: 126 YLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYA 182
Query: 248 PEYAMTGQITQKSDVYSFGVVLLELLT 274
PE +++SDV+SFGVVL EL T
Sbjct: 183 PESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIK-KLDTSSAPEPESDFAAQLSVVSRLKHE 125
NF IGEG+YG V+ A KLT A K +LDT + P S ++S++ L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVP-STAIREISLLKELNHP 61
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYGA 183
+ V+LL N LV++F LH L P P++ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 111
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
+GL F H ++HRD++ N+L+ + K+ADF L ++ R ++ V+ T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 166
Query: 244 GYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 76 IGEGSYGRVFYA------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHE-HFV 128
+G G++G+V A K A+K L + ++L ++ + H + V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 129 ELLGYCMESNNRILVY-QFATMGSLHDVLHGRKG-VQGAEPGP------VLTWNQRVKVA 180
LLG C + ++V +F G+L L ++ + P LT + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
+ AKG+EFL + +HRD+ + N+LL + KI DF L +
Sbjct: 192 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ +
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 19/230 (8%)
Query: 54 EIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSS---APEPES 110
EIP++ +D +R +G+G + + F D K+ S P
Sbjct: 5 EIPEVLVDPRSRRRYV--RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 62
Query: 111 DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPV 170
+ ++S+ L H+H V G+ +++ +V + SL ++ RK + EP
Sbjct: 63 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL--TEPEAR 120
Query: 171 LTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDT 230
Q V G ++LH ++HRD++ N+ L +D + KI DF L +
Sbjct: 121 YYLRQIVL-------GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 170
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
R + GT Y APE + + DV+S G ++ LL G+ P +
Sbjct: 171 GER--KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 64
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 114
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-T 169
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 63
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 113
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-T 168
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 60
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 110
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-T 165
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 76 IGEGSYGRVFYAKLT-DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
IGEGS G V A+ G A+K +D E F ++ ++ +H + VE+
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFN-EVVIMRDYQHFNVVEMYKSY 111
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKV 194
+ ++ +F G+L D++ + L Q V + L +LH +
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVSQVR----------LNEEQIATVCEAVLQALAYLHAQ- 160
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ-SSDTAARLHSTRVLGTFGYHAPEYAMT 253
++HRD++S ++LL D + K++DF Q S D R ++GT + APE
Sbjct: 161 --GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR---KXLVGTPYWMAPEVISR 215
Query: 254 GQITQKSDVYSFGVVLLELLTGRKP 278
+ D++S G++++E++ G P
Sbjct: 216 SLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 60
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 110
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-T 165
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 127
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + T + GT Y PE
Sbjct: 128 K---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSS----RRTTLSGTLDYLPPEMIE 180
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 64
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKTFMDASALTGIPLPLIK-----SYLFQ 114
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-T 169
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 62
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 112
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-T 167
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 62
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 112
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-T 167
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 62
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 112
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-T 167
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 64
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 114
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-T 169
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 61
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAE--PGPVLTWNQRVKVAYG 182
+ V+LL N LV++F LH L P P++ +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQ 111
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-T 166
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 19/230 (8%)
Query: 54 EIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSS---APEPES 110
EIP++ +D +R +G+G + + F D K+ S P
Sbjct: 27 EIPEVLVDPRSRRRYV--RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 84
Query: 111 DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPV 170
+ ++S+ L H+H V G+ +++ +V + SL ++ RK + EP
Sbjct: 85 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL--TEPEAR 142
Query: 171 LTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDT 230
Q V G ++LH ++HRD++ N+ L +D + KI DF L +
Sbjct: 143 YYLRQIVL-------GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 192
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
R + GT Y APE + + DV+S G ++ LL G+ P +
Sbjct: 193 GER--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 19/230 (8%)
Query: 54 EIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSS---APEPES 110
EIP++ +D +R +G+G + + F D K+ S P
Sbjct: 5 EIPEVLVDPRSRRRYV--RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 62
Query: 111 DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPV 170
+ ++S+ L H+H V G+ +++ +V + SL ++ RK + EP
Sbjct: 63 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL--TEPEAR 120
Query: 171 LTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDT 230
Q V G ++LH ++HRD++ N+ L +D + KI DF L +
Sbjct: 121 YYLRQIVL-------GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 170
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
R + GT Y APE + + DV+S G ++ LL G+ P +
Sbjct: 171 GER--KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 19/230 (8%)
Query: 54 EIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSS---APEPES 110
EIP++ +D +R +G+G + + F D K+ S P
Sbjct: 29 EIPEVLVDPRSRRRYV--RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 86
Query: 111 DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPV 170
+ ++S+ L H+H V G+ +++ +V + SL ++ RK + EP
Sbjct: 87 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL--TEPEAR 144
Query: 171 LTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDT 230
Q V G ++LH ++HRD++ N+ L +D + KI DF L +
Sbjct: 145 YYLRQIVL-------GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
R + GT Y APE + + DV+S G ++ LL G+ P +
Sbjct: 195 GER--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 76 IGEGSYGRVFYA------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHE-HFV 128
+G G++G+V A K A+K L + ++L ++ + H + V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 129 ELLGYCMESNNRILVY-QFATMGSLHDVLHGRKG-VQGAEPGP------VLTWNQRVKVA 180
LLG C + ++V +F G+L L ++ + P LT + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
+ AKG+EFL + +HRD+ + N+LL + KI DF L +
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 76 IGEGSYGRV---FYAKLTDGTPA--AIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D T A A+K+L S P+ + DF ++ ++ L + V+
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 131 LG--YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G Y + LV ++ G L D L + A +L ++ ++ KG+E
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA--SRLLLYSSQI------CKGME 141
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT--FGYH 246
+L + VHRD+ + N+L+ + KIADF L + R G ++
Sbjct: 142 YLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLP-LDKDYYVVREPGQSPIFWY 197
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE +++SDV+SFGVVL EL T
Sbjct: 198 APESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 76 IGEGSYGRV---FYAKLTDGTPA--AIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G+G++G V Y L D T A A+K+L S P+ + DF ++ ++ L + V+
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 131 LG--YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
G Y + LV ++ G L D L + A +L ++ ++ KG+E
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA--SRLLLYSSQI------CKGME 128
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT--FGYH 246
+L + VHRD+ + N+L+ + KIADF L + R G ++
Sbjct: 129 YLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLP-LDKDYYVVREPGQSPIFWY 184
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLT 274
APE +++SDV+SFGVVL EL T
Sbjct: 185 APESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 70 FGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPE-SDFAAQLSVVSRLKHEHF 127
+ ++G+GS+G V K A+K ++ +SA + S ++ ++ +L H +
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 128 VELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
++L +S++ +V + T G L D + RK + + +K + G+
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARI------IKQVFS---GI 134
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFD---DFKSKIADFNLTN---QSSDTAARLHSTRVLG 241
++H + IVHRD++ N+LL D KI DF L+ Q++ R+ G
Sbjct: 135 TYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI------G 185
Query: 242 TFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
T Y APE + G +K DV+S GV+L LL+G P
Sbjct: 186 TAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 76 IGEGSYGRVFYA------KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHE-HFV 128
+G G++G+V A K A+K L + ++L ++ + H + V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 129 ELLGYCMESNNRILVY-QFATMGSLHDVLHGRKG-VQGAEPGP------VLTWNQRVKVA 180
LLG C + ++V +F G+L L ++ + P LT + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
+ AKG+EFL + +HRD+ + N+LL + KI DF L +
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ APE T +SDV+SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 123
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + T + GT Y PE
Sbjct: 124 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIE 176
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 177 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 23/210 (10%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 129
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ--SSDTAARLHSTRVLGTFGYHAPEY 250
K ++HRD++ N+LL + KIADF + SS AA + GT Y PE
Sbjct: 130 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA------LCGTLDYLPPEM 180
Query: 251 AMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEH 126
N+ IG+G++ +V A+ + G A+K +D T ++ ++ L H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVL--HGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
V+L LV ++A+ G + D L HGR + A + Q V
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA----KFRQIVS------ 124
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
+++ H+K IVHRD+++ N+LL D KIADF +N+ + +L + G+
Sbjct: 125 -AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT--FCGSPP 177
Query: 245 YHAPEYAMTGQITQ-KSDVYSFGVVLLELLTGRKPVD 280
Y APE + + DV+S GV+L L++G P D
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 27/259 (10%)
Query: 67 TSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPE---SDFAAQLSVVSRLK 123
+F +G+G +G V+ A+ K+ S E E ++ + S L+
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVL--HGRKGVQGAEPGPVLTWNQRVKVAY 181
H + + + Y + L+ +FA G L+ L HGR Q + T+ + +
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA-----TFMEEL---- 124
Query: 182 GAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLG 241
A L + HE+ ++HRD++ N+L+ + KIADF S A L + G
Sbjct: 125 --ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGW----SVHAPSLRRRXMCG 175
Query: 242 TFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD---HTMPKGQQSLVTWATPRL 298
T Y PE +K D++ GV+ E L G P D HT + V P
Sbjct: 176 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF 235
Query: 299 SEDKVKQCVDPKLNNDYPP 317
D K + KL +PP
Sbjct: 236 LSDGSKDLIS-KLLRYHPP 253
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 18/232 (7%)
Query: 70 FGTKALIGEGSYGRV-FYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
F K +G G++G V + + G IK ++ + P A++ V+ L H + +
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 129 ELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
++ + +N +V + G L + + V G L+ ++ L
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLE-----RIVSAQARGKALSEGYVAELMKQMMNALA 138
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKS---KIADFNLTNQ-SSDTAARLHSTRVLGTFG 244
+ H + +VH+D++ N+L D KI DF L SD HST GT
Sbjct: 139 YFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE----HSTNAAGTAL 191
Query: 245 YHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATP 296
Y APE +T K D++S GVV+ LLTG P T + Q T+ P
Sbjct: 192 YMAPE-VFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP 242
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 20/211 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEP---ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ K+ + E E ++ + S L+H + + L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT---------ELANALSYCHS 130
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + + KIADF + + + T + GT Y PE
Sbjct: 131 K---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIE 183
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD-HT 282
+K D++S GV+ E L G P + HT
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEH 126
N+ IG+G++ +V A+ + G A+K +D T ++ ++ L H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVL--HGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
V+L LV ++A+ G + D L HGR + A + Q V
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA----KFRQIVS------ 124
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
+++ H+K IVHRD+++ N+LL D KIADF +N+ + +L + G+
Sbjct: 125 -AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT--FCGSPP 177
Query: 245 YHAPEYAMTGQITQ-KSDVYSFGVVLLELLTGRKPVD 280
Y APE + + DV+S GV+L L++G P D
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 18/230 (7%)
Query: 63 LNRLTSNFGTKALIGEGSYGRVFYAKLT-DGTPAAIKKLDTSSAPEPESDFAAQLSVVSR 121
+NR ++ + +IG G+ V A AIK+++ + ++ +S+
Sbjct: 7 INR--DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQ 64
Query: 122 LKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAY 181
H + V + + LV + + GS+ D++ +G VL + +
Sbjct: 65 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIK-HIVAKGEHKSGVLDESTIATILR 123
Query: 182 GAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFN----LTNQSSDTAARLHST 237
+GLE+LH+ Q +HRDV++ N+LL +D +IADF L T ++ T
Sbjct: 124 EVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 180
Query: 238 RVLGTFGYHAPEYAMTGQITQ---KSDVYSFGVVLLELLTGRKPVDHTMP 284
V GT + APE + Q+ K+D++SFG+ +EL TG P H P
Sbjct: 181 FV-GTPCWMAPE--VMEQVRGYDFKADIWSFGITAIELATGAAPY-HKYP 226
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 27/259 (10%)
Query: 67 TSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPE---SDFAAQLSVVSRLK 123
+F +G+G +G V+ A+ K+ S E E ++ + S L+
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVL--HGRKGVQGAEPGPVLTWNQRVKVAY 181
H + + + Y + L+ +FA G L+ L HGR Q + T+ + +
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA-----TFMEEL---- 123
Query: 182 GAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLG 241
A L + HE+ ++HRD++ N+L+ + KIADF S A L + G
Sbjct: 124 --ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGW----SVHAPSLRRRXMCG 174
Query: 242 TFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD---HTMPKGQQSLVTWATPRL 298
T Y PE +K D++ GV+ E L G P D HT + V P
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF 234
Query: 299 SEDKVKQCVDPKLNNDYPP 317
D K + KL +PP
Sbjct: 235 LSDGSKDLIS-KLLRYHPP 252
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 27/259 (10%)
Query: 67 TSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPE---SDFAAQLSVVSRLK 123
+F +G+G +G V+ A+ K+ S E E ++ + S L+
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVL--HGRKGVQGAEPGPVLTWNQRVKVAY 181
H + + + Y + L+ +FA G L+ L HGR Q + T+ + +
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA-----TFMEEL---- 123
Query: 182 GAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLG 241
A L + HE+ ++HRD++ N+L+ + KIADF S A L + G
Sbjct: 124 --ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGW----SVHAPSLRRRXMCG 174
Query: 242 TFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD---HTMPKGQQSLVTWATPRL 298
T Y PE +K D++ GV+ E L G P D HT + V P
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF 234
Query: 299 SEDKVKQCVDPKLNNDYPP 317
D K + KL +PP
Sbjct: 235 LSDGSKDLIS-KLLRYHPP 252
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 152
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + + GT Y PE
Sbjct: 153 KR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRDDLCGTLDYLPPEMIE 205
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 206 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 23/210 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEP---ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ K+ + E E ++ + S L+H + + L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 126
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ--SSDTAARLHSTRVLGTFGYHAPEY 250
K ++HRD++ N+LL + KIADF + SS AA + GT Y PE
Sbjct: 127 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA------LCGTLDYLPPEM 177
Query: 251 AMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A G ++ L +T A L + H
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT---------ELANALSYCHS 131
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + T + GT Y PE
Sbjct: 132 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIE 184
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 18/230 (7%)
Query: 63 LNRLTSNFGTKALIGEGSYGRVFYAKLT-DGTPAAIKKLDTSSAPEPESDFAAQLSVVSR 121
+NR ++ + +IG G+ V A AIK+++ + ++ +S+
Sbjct: 12 INR--DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQ 69
Query: 122 LKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAY 181
H + V + + LV + + GS+ D++ +G VL + +
Sbjct: 70 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIK-HIVAKGEHKSGVLDESTIATILR 128
Query: 182 GAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFN----LTNQSSDTAARLHST 237
+GLE+LH+ Q +HRDV++ N+LL +D +IADF L T ++ T
Sbjct: 129 EVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 185
Query: 238 RVLGTFGYHAPEYAMTGQITQ---KSDVYSFGVVLLELLTGRKPVDHTMP 284
V GT + APE + Q+ K+D++SFG+ +EL TG P H P
Sbjct: 186 FV-GTPCWMAPE--VMEQVRGYDFKADIWSFGITAIELATGAAPY-HKYP 231
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 19/230 (8%)
Query: 54 EIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSS---APEPES 110
EIP++ +D +R +G+G + + F D K+ S P
Sbjct: 3 EIPEVLVDPRSRRRYV--RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 60
Query: 111 DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPV 170
+ ++S+ L H+H V G+ +++ +V + SL ++ RK + EP
Sbjct: 61 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL--TEPEAR 118
Query: 171 LTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDT 230
Q V G ++LH ++HRD++ N+ L +D + KI DF L +
Sbjct: 119 YYLRQIVL-------GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
R + GT Y APE + + DV+S G ++ LL G+ P +
Sbjct: 169 GER--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 26/227 (11%)
Query: 76 IGEGSYGRV-FYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL-KHEHFVELLGY 133
+GEG + V L DG A+K++ + E A + + + RL H + + L+ Y
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREE--AQREADMHRLFNHPNILRLVAY 94
Query: 134 CMES----NNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
C+ + L+ F G+L + + K + G LT +Q + + G +GLE
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLK-----DKGNFLTEDQILWLLLGICRGLEA 149
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQS------SDTAARLHSTRV-LGT 242
+H K HRD++ +N+LL D+ + + D NQ+ S A L T
Sbjct: 150 IHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206
Query: 243 FGYHAPE-YAMTGQ--ITQKSDVYSFGVVLLELLTGRKPVDHTMPKG 286
Y APE +++ I +++DV+S G VL ++ G P D KG
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG 253
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 97/224 (43%), Gaps = 46/224 (20%)
Query: 76 IGEGSYGRVFYAKLT---DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKH-EHFVELL 131
IG G+YG V K+ G A+K++ ++ + + L VV R + V+
Sbjct: 30 IGRGAYGSV--NKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFY 87
Query: 132 G---------YCME----SNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVK 178
G CME S ++ Y ++ L DV+ P +L K
Sbjct: 88 GALFREGDCWICMELMSTSFDKFYKYVYSV---LDDVI----------PEEILG-----K 129
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR 238
+ K L L E ++ I+HRD++ SN+LL K+ DF ++ Q D+ A+ TR
Sbjct: 130 ITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK---TR 184
Query: 239 VLGTFGYHAPEYAMTGQITQ----KSDVYSFGVVLLELLTGRKP 278
G Y APE Q +SDV+S G+ L EL TGR P
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 128
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + + GT Y PE
Sbjct: 129 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYLPPEMIE 181
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 182 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 128
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIA+F + + + T + GT Y PE
Sbjct: 129 K---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTTLCGTLDYLPPEMIE 181
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 182 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 109/222 (49%), Gaps = 36/222 (16%)
Query: 71 GTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPESDFA----AQLSVVSRLKHE 125
G + ++G+G+YG V+ + L++ AIK++ PE +S ++ ++++ LKH+
Sbjct: 25 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEI-----PERDSRYSQPLHEEIALHKHLKHK 79
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAK 185
+ V+ LG E+ + + GSL +L + G + + +++ +
Sbjct: 80 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI------LE 133
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS--KIADFNLTNQSSDTAARLH-----STR 238
GL++LH+ IVHRD++ NVL+ + + KI+DF T+ RL +
Sbjct: 134 GLKYLHDN---QIVHRDIKGDNVLI-NTYSGVLKISDFG-------TSKRLAGINPCTET 182
Query: 239 VLGTFGYHAPEYAMTG--QITQKSDVYSFGVVLLELLTGRKP 278
GT Y APE G + +D++S G ++E+ TG+ P
Sbjct: 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEH 126
N+ IG+G++ +V A+ + G A+K +D T ++ ++ L H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVL--HGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
V+L LV ++A+ G + D L HGR + A + Q V
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA----KFRQIVS------ 124
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
+++ H+K IVHRD+++ N+LL D KIADF +N+ + +L + G
Sbjct: 125 -AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDA--FCGAPP 177
Query: 245 YHAPEYAMTGQITQ-KSDVYSFGVVLLELLTGRKPVD 280
Y APE + + DV+S GV+L L++G P D
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 19/206 (9%)
Query: 74 ALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAA-QLSVVSRLKHEHFVELL 131
L+GEGSYG V + D G AIKK S + A ++ ++ +L+HE+ V LL
Sbjct: 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
C + LV++F L D+ G L + K + G+ F H
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILDDLELFPNG---------LDYQVVQKYLFQIINGIGFCH 141
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYA 251
I+HRD++ N+L+ K+ DF ++ ++ V T Y APE
Sbjct: 142 SH---NIIHRDIKPENILVSQSGVVKLCDFGFA-RTLAAPGEVYDDEV-ATRWYRAPE-L 195
Query: 252 MTGQIT--QKSDVYSFGVVLLELLTG 275
+ G + + DV++ G ++ E+ G
Sbjct: 196 LVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEP---ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ K+ + E E ++ + S L+H + + L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 129
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIA+F + + + T + GT Y PE
Sbjct: 130 K---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTTLCGTLDYLPPEMIE 182
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 23/220 (10%)
Query: 75 LIGEGSYGRVFYAKLTDG----TPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+IG+G +G V++ + D AIK L + + F + ++ L H + + L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 131 LGYCM--ESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
+G + E +L+ + G L + ++ + P T + A+G+E
Sbjct: 88 IGIMLPPEGLPHVLL-PYMCHGDL------LQFIRSPQRNP--TVKDLISFGLQVARGME 138
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDT---AARLHSTRVLGTFGY 245
+L E+ VHRD+ + N +L + F K+ADF L D + + H L +
Sbjct: 139 YLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPV-KW 194
Query: 246 HAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKPVDHTMP 284
A E T + T KSDV+SFGV+L ELLT G P H P
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP 234
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 13/167 (7%)
Query: 112 FAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL 171
F ++ S+L H++ V ++ E + LV ++ +L + + GP L
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH--------GP-L 108
Query: 172 TWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTA 231
+ + + G++ H+ IVHRD++ N+L+ + KI DF + S+T+
Sbjct: 109 SVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165
Query: 232 ARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ VLGT Y +PE A + +D+YS G+VL E+L G P
Sbjct: 166 LT-QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI F L + D +TR Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 108/222 (48%), Gaps = 36/222 (16%)
Query: 71 GTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPESDFA----AQLSVVSRLKHE 125
G + ++G+G+YG V+ + L++ AIK++ PE +S ++ ++++ LKH+
Sbjct: 11 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEI-----PERDSRYSQPLHEEIALHKHLKHK 65
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAK 185
+ V+ LG E+ + + GSL +L + G + + +++ +
Sbjct: 66 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI------LE 119
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS--KIADFNLTNQSSDTAARLHSTR----- 238
GL++LH+ IVHRD++ NVL+ + + KI+DF T+ RL
Sbjct: 120 GLKYLHDN---QIVHRDIKGDNVLI-NTYSGVLKISDFG-------TSKRLAGINPCTET 168
Query: 239 VLGTFGYHAPEYAMTG--QITQKSDVYSFGVVLLELLTGRKP 278
GT Y APE G + +D++S G ++E+ TG+ P
Sbjct: 169 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEP---ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ K+ + E E ++ + S L+H + + L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 126
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + + GT Y PE
Sbjct: 127 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYLPPEMIE 179
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEH 126
N+ IG+G++ +V A+ + G A++ +D T ++ ++ L H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVL--HGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
V+L LV ++A+ G + D L HGR + A + Q V
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA----KFRQIVS------ 124
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
+++ H+K IVHRD+++ N+LL D KIADF +N+ + +L + G+
Sbjct: 125 -AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT--FCGSPP 177
Query: 245 YHAPEYAMTGQITQ-KSDVYSFGVVLLELLTGRKPVD 280
Y APE + + DV+S GV+L L++G P D
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEP---ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ K+ + E E ++ + S L+H + + L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 129
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + + GT Y PE
Sbjct: 130 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYLPPEMIE 182
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 127
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + + GT Y PE
Sbjct: 128 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRDTLCGTLDYLPPEMIE 180
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI D L + D T + T Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEM-----TGYVATRWYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 99/231 (42%), Gaps = 28/231 (12%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVFYAK--LTDGTPAAIKKLDTSSAPE--PESDF--AA 114
D L R + A IGEG+YG+VF A+ G A+K++ + E P S A
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 115 QLSVVSRLKHEHFVELLGYCMESNNR-----ILVYQFATMGSLHDVLHGRKGVQGAEPG- 168
L + +H + V L C S LV++ D+ V EPG
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKV--PEPGV 117
Query: 169 PVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS 228
P T + + +GL+FLH +VHRD++ N+L+ + K+ADF L S
Sbjct: 118 PTETIKD---MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
Query: 229 DTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
A T V+ T Y APE + D++S G + E+ RKP+
Sbjct: 172 FQMA---LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 15/230 (6%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
S+F ++G+GS+G+VF + + + D+ + A L V R++ +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVR-------KVTRPDSGHLYAMKVLKKATLKVRDRVRTKME 80
Query: 128 VELLGYCMESNNRILVYQFATMGSLHDVLHGRKG--VQGAEPGPVLTWNQRVKVAYGA-A 184
++L L Y F T G L+ +L +G + V+ + VK A
Sbjct: 81 RDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELA 140
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
GL+ LH I++RD++ N+LL ++ K+ DF L+ ++ D + +S GT
Sbjct: 141 LGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVE 195
Query: 245 YHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWA 294
Y APE + +D +S+GV++ E+LTG P K +L+ A
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKA 245
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 102/247 (41%), Gaps = 27/247 (10%)
Query: 62 ELNRLTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVS 120
+ + L + IG G + +V A + G AIK +D ++ ++ +
Sbjct: 4 DYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALK 63
Query: 121 RLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVK-V 179
L+H+H +L +N +V ++ G L D + + + E V Q V V
Sbjct: 64 NLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVF--RQIVSAV 121
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF-KSKIADFNLTNQSSDTAARLHSTR 238
AY ++G HRD++ N LLFD++ K K+ DF L + H
Sbjct: 122 AYVHSQG-----------YAHRDLKPEN-LLFDEYHKLKLIDFGLCAKPKGNKD-YHLQT 168
Query: 239 VLGTFGYHAPEYAM-TGQITQKSDVYSFGVVLLELLTGRKPVD--------HTMPKGQQS 289
G+ Y APE + ++DV+S G++L L+ G P D + +G+
Sbjct: 169 CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYD 228
Query: 290 LVTWATP 296
+ W +P
Sbjct: 229 VPKWLSP 235
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI--RK---------IGSFDETCTRFYTAEI 141
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 142 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 198
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
Y +PE ++ SD+++ G ++ +L+ G P
Sbjct: 199 QYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 99/231 (42%), Gaps = 28/231 (12%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVFYAK--LTDGTPAAIKKLDTSSAPE--PESDF--AA 114
D L R + A IGEG+YG+VF A+ G A+K++ + E P S A
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 115 QLSVVSRLKHEHFVELLGYCMESNNR-----ILVYQFATMGSLHDVLHGRKGVQGAEPG- 168
L + +H + V L C S LV++ D+ V EPG
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKV--PEPGV 117
Query: 169 PVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS 228
P T + + +GL+FLH +VHRD++ N+L+ + K+ADF L S
Sbjct: 118 PTETIKD---MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
Query: 229 DTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
A T V+ T Y APE + D++S G + E+ RKP+
Sbjct: 172 FQMA---LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEP---ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ K+ + E E ++ + S L+H + + L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELANALSYCHS 129
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + + GT Y PE
Sbjct: 130 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRDDLCGTLDYLPPEMIE 182
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEH 126
N+ IG+G++ +V A+ + G A++ +D T ++ ++ L H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVL--HGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
V+L LV ++A+ G + D L HGR + A + Q V
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA----KFRQIVS------ 124
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
+++ H+K IVHRD+++ N+LL D KIADF +N+ + +L G+
Sbjct: 125 -AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDE--FCGSPP 177
Query: 245 YHAPEYAMTGQITQ-KSDVYSFGVVLLELLTGRKPVD 280
Y APE + + DV+S GV+L L++G P D
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 99/231 (42%), Gaps = 28/231 (12%)
Query: 61 DELNRLTSNFGTKALIGEGSYGRVFYAK--LTDGTPAAIKKLDTSSAPE--PESDF--AA 114
D L R + A IGEG+YG+VF A+ G A+K++ + E P S A
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 115 QLSVVSRLKHEHFVELLGYCMESNNR-----ILVYQFATMGSLHDVLHGRKGVQGAEPG- 168
L + +H + V L C S LV++ D+ V EPG
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKV--PEPGV 117
Query: 169 PVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS 228
P T + + +GL+FLH +VHRD++ N+L+ + K+ADF L S
Sbjct: 118 PTETIKD---MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
Query: 229 DTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
A T V+ T Y APE + D++S G + E+ RKP+
Sbjct: 172 FQMA---LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI D L + D T + T Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEM-----TGYVATRWYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 23/238 (9%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAEI 141
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 142 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED 301
Y +PE + SD+++ G ++ +L+ G P G + L+ +L D
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEGLIFAKIIKLEYD 252
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVELL- 131
+G G+YG V A T G A+KKL S + + +L ++ +KHE+ + LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 132 ----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+E N + + L++++ +K LT + + Y +GL
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHVQFLIYQILRGL 138
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
+++H I+HRD++ SN+ + +D + KI D L + D +TR Y A
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WYRA 190
Query: 248 PEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
PE + Q D++S G ++ ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 71 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAEI 119
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 120 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 176
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
Y +PE + SD+++ G ++ +L+ G P
Sbjct: 177 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 100/236 (42%), Gaps = 33/236 (13%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKK-LDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
IGEGSYG VF + D G AIKK L++ P + ++ ++ +LKH + V LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
LV+++ LH++ ++GV P ++ + + + + F H+
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGV----PEHLVK-----SITWQTLQAVNFCHKH 121
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM- 252
+HRDV+ N+L+ K+ DF T + + T Y +PE +
Sbjct: 122 ---NCIHRDVKPENILITKHSVIKLCDFGFARLL--TGPSDYYDDEVATRWYRSPELLVG 176
Query: 253 TGQITQKSDVYSFGVVLLELLTG----------------RKPVDHTMPKGQQSLVT 292
Q DV++ G V ELL+G RK + +P+ QQ T
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFST 232
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPE-PESDFAAQLSVVSRLKHEHFVELLGYC 134
IGEG+YG V+ A+ G A+KK+ E S ++S++ LKH + V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 135 MESNNRILVYQFAT--MGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
+LV++ + L DV G G++ L G+ + H+
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEG--GLESVTAKSFLL---------QLLNGIAYCHD 118
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
+ ++HRD++ N+L+ + + KIADF L ++ R ++ V+ T Y AP+ M
Sbjct: 119 R---RVLHRDLKPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEVV-TLWYRAPDVLM 173
Query: 253 -TGQITQKSDVYSFGVVLLELLTG 275
+ + + D++S G + E++ G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPE-PESDFAAQLSVVSRLKHEHFVELLGYC 134
IGEG+YG V+ A+ G A+KK+ E S ++S++ LKH + V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 135 MESNNRILVYQFAT--MGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
+LV++ + L DV G G++ L G+ + H+
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEG--GLESVTAKSFLL---------QLLNGIAYCHD 118
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
+ ++HRD++ N+L+ + + KIADF L ++ R ++ V+ T Y AP+ M
Sbjct: 119 R---RVLHRDLKPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEVV-TLWYRAPDVLM 173
Query: 253 -TGQITQKSDVYSFGVVLLELLTG 275
+ + + D++S G + E++ G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 23/238 (9%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAEI 142
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 143 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 199
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED 301
Y +PE + SD+++ G ++ +L+ G P G + L+ +L D
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 253
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAEI 141
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 142 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
Y +PE + SD+++ G ++ +L+ G P
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 70 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAEI 118
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 119 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 175
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
Y +PE + SD+++ G ++ +L+ G P
Sbjct: 176 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAEI 142
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 143 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 199
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
Y +PE + SD+++ G ++ +L+ G P
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAEI 144
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 145 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 201
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
Y +PE + SD+++ G ++ +L+ G P
Sbjct: 202 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 20/211 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEP---ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ K+ + E E ++ + S L+H + + L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A +G+++ L +T A L + H
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT---------ELANALSYCHS 130
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + + KIADF + + + + GT Y PE
Sbjct: 131 K---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS----RRDTLCGTLDYLPPEMIE 183
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD-HT 282
+K D++S GV+ E L G P + HT
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 23/238 (9%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAEI 141
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 142 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED 301
Y +PE + SD+++ G ++ +L+ G P G + L+ +L D
Sbjct: 199 QYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP----FRAGNEGLIFAKIIKLEYD 252
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 23/238 (9%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAEI 141
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 142 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED 301
Y +PE + SD+++ G ++ +L+ G P G + L+ +L D
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 252
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPE-PESDFAAQLSVVSRLKHEHFVELLGYC 134
IGEG+YG V+ A+ G A+KK+ E S ++S++ LKH + V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 135 MESNNRILVYQFAT--MGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
+LV++ + L DV G G++ L G+ + H+
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEG--GLESVTAKSFLL---------QLLNGIAYCHD 118
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
+ ++HRD++ N+L+ + + KIADF L ++ R ++ ++ T Y AP+ M
Sbjct: 119 R---RVLHRDLKPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEIV-TLWYRAPDVLM 173
Query: 253 -TGQITQKSDVYSFGVVLLELLTG 275
+ + + D++S G + E++ G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 23/238 (9%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAEI 139
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 140 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED 301
Y +PE + SD+++ G ++ +L+ G P G + L+ +L D
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 250
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEH 126
N+ IG+G++ +V A+ + G A+K +D T ++ + L H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVL--HGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
V+L LV ++A+ G + D L HGR + A + Q V
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARA----KFRQIVS------ 124
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
+++ H+K IVHRD+++ N+LL D KIADF +N+ + +L + G
Sbjct: 125 -AVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFT-FGNKLDA--FCGAPP 177
Query: 245 YHAPEYAMTGQITQ-KSDVYSFGVVLLELLTGRKPVD 280
Y APE + + DV+S GV+L L++G P D
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 23/238 (9%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAEI 139
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 140 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED 301
Y +PE + SD+++ G ++ +L+ G P G + L+ +L D
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 250
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGT-PAAIKKLDTSSAPEP--ESDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ A+K L + + E ++ + S L+H + + L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y ++ L+ ++A G ++ L +T A L + H
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT---------ELANALSYCHS 131
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF + + + + GT Y PE
Sbjct: 132 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLXGTLDYLPPEMIE 184
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++S GV+ E L G+ P +
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 60
Query: 125 EHFVELLGYCMESNNRILVYQFA--TMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+ V+LL N LV++ + + D + G P P++ +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDA----SALTGI-PLPLIK-----SYLFQ 110
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
+GL F H ++HRD++ N+L+ + K+ADF L ++ R ++ V+ T
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-T 165
Query: 243 FGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 27/232 (11%)
Query: 58 IKLDELNRL-TSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQ 115
I ++ NRL NF ++G+GS+G+V A++ + G A+K L + + D
Sbjct: 12 IGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQ-DDDVECT 70
Query: 116 LS---VVSRLKHEHFVELLGYCMESNNRIL-VYQFATMGSLHDVLHGRKGVQGAEPGPVL 171
++ ++S ++ F+ L C ++ +R+ V +F G L + H +K + E
Sbjct: 71 MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDE----- 123
Query: 172 TWNQRVKVAYGAAK---GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS 228
+ + AA+ L FLH+K I++RD++ NVLL + K+ADF + +
Sbjct: 124 -----ARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG- 174
Query: 229 DTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
+ + GT Y APE D ++ GV+L E+L G P +
Sbjct: 175 -ICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 23/238 (9%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAEI 117
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 118 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 174
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED 301
Y +PE + SD+++ G ++ +L+ G P G + L+ +L D
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 228
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLD-TSSAPEPESDFAAQLSVVSRLKHEH 126
N+ IG+G++ +V A+ + G A+K +D T ++ ++ L H +
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKG 186
V+L LV ++A+ G + D L ++ E R K
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEA--------RAKFR-QIVSA 118
Query: 187 LEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
+++ H+K IVHRD+++ N+LL D KIADF +N+ + +L + G+ Y
Sbjct: 119 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT--FCGSPPYA 172
Query: 247 APEYAMTGQITQ-KSDVYSFGVVLLELLTGRKPVD 280
APE + + DV+S GV+L L++G P D
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 19/225 (8%)
Query: 61 DELNRLT-SNFGTKALIGEGSYGRVFYA--KLTDGTPA-AIKKLDTSSAPEPESDFAAQL 116
+ L+R+ ++F ++G+GS+G+V A K T+ A I K D + +
Sbjct: 11 NNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEK 70
Query: 117 SVVSRLKHEHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
V++ L F+ L C ++ +R+ V ++ G L + H ++ + EP Q
Sbjct: 71 RVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL--MYHIQQVGKFKEP-------Q 121
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V A + GL FLH++ I++RD++ NV+L + KIADF + + +
Sbjct: 122 AVFYAAEISIGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEH--MMDGVT 176
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
+ GT Y APE + D +++GV+L E+L G+ P D
Sbjct: 177 TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 23/238 (9%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAEI 141
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 142 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED 301
Y +PE + SD+++ G ++ +L+ G P G + L+ +L D
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 252
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 22/219 (10%)
Query: 70 FGTKALIGEGSYGRVF-YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+ K +G G +G V + G AIK+ +P+ + ++ ++ +L H + V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 129 EL------LGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
L ++ +L ++ G L L+ + G + GP+ T +
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT------LLSD 130
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRV 239
+ L +LHE I+HRD++ N++L KI D + T
Sbjct: 131 ISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEF 184
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+GT Y APE + T D +SFG + E +TG +P
Sbjct: 185 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 23/238 (9%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAEI 116
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 117 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 173
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED 301
Y +PE + SD+++ G ++ +L+ G P G + L+ +L D
Sbjct: 174 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 227
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 22/219 (10%)
Query: 70 FGTKALIGEGSYGRVF-YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+ K +G G +G V + G AIK+ +P+ + ++ ++ +L H + V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 129 EL------LGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
L ++ +L ++ G L L+ + G + GP+ T +
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT------LLSD 129
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRV 239
+ L +LHE I+HRD++ N++L KI D + T
Sbjct: 130 ISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEF 183
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+GT Y APE + T D +SFG + E +TG +P
Sbjct: 184 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 119/271 (43%), Gaps = 46/271 (16%)
Query: 65 RLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
R S+F A++G+G++G+V A+ D AIKK+ E S +++ +++ L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI--RHTEEKLSTILSEVMLLASLN 60
Query: 124 HEHFVELLGYCMESNNRI-------------LVYQFATMGSLHDVLHGRKGVQGAEPGPV 170
H++ V +E N + + ++ G+L+D++H Q +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE--- 117
Query: 171 LTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTN--QSS 228
W ++ + L ++H + I+HRD++ N+ + + KI DF L S
Sbjct: 118 -YW----RLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 229 DTAARLHS----------TRVLGTFGYHAPEYAM-TGQITQKSDVYSFGVVLLELL---- 273
+L S T +GT Y A E TG +K D+YS G++ E++
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFS 229
Query: 274 TGRKPVDHTMPKGQQSLVTWATPRLSEDKVK 304
TG + V+ + K +S+ P ++K+K
Sbjct: 230 TGMERVN--ILKKLRSVSIEFPPDFDDNKMK 258
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 32/223 (14%)
Query: 76 IGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAA----QLSVVSRLKHEHFVEL 130
+G G+YG V A G AIKKL S P FA +L ++ ++HE+ + L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL---SRPFQSEIFAKRAYRELLLLKHMQHENVIGL 106
Query: 131 LGYCMESNNRILVYQF-ATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVK-VAYGAAKGLE 188
L +++ Y F M + L G++ +E ++++ + Y KGL+
Sbjct: 107 LDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSE--------EKIQYLVYQMLKGLK 158
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
++H +VHRD++ N+ + +D + KI DF L A T + T Y AP
Sbjct: 159 YIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARH-----ADAEMTGYVVTRWYRAP 210
Query: 249 EYAMTG-QITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSL 290
E ++ Q D++S G ++ E+LTG+ T+ KG+ L
Sbjct: 211 EVILSWMHYNQTVDIWSVGCIMAEMLTGK-----TLFKGKDYL 248
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 23/238 (9%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAEI 139
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 140 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTA 196
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED 301
Y +PE + SD+++ G ++ +L+ G P G + L+ +L D
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 250
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 32/223 (14%)
Query: 76 IGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAA----QLSVVSRLKHEHFVEL 130
+G G+YG V A G AIKKL S P FA +L ++ ++HE+ + L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL---SRPFQSEIFAKRAYRELLLLKHMQHENVIGL 88
Query: 131 LGYCMESNNRILVYQF-ATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVK-VAYGAAKGLE 188
L +++ Y F M + L G++ +E ++++ + Y KGL+
Sbjct: 89 LDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSE--------EKIQYLVYQMLKGLK 140
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
++H +VHRD++ N+ + +D + KI DF L A T + T Y AP
Sbjct: 141 YIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARH-----ADAEMTGYVVTRWYRAP 192
Query: 249 EYAMTG-QITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSL 290
E ++ Q D++S G ++ E+LTG+ T+ KG+ L
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGK-----TLFKGKDYL 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 23/238 (9%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAEI 123
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 124 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 180
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED 301
Y +PE + SD+++ G ++ +L+ G P G + L+ +L D
Sbjct: 181 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 234
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 76 IGEGSYGRVFYAK--LTDGTPAAIKKLDTSSAPEPESDFAA--QLSVVSRLKHEHFVELL 131
+G G+YG V K LT G AIK + SS + A +++V+ +L H + ++L
Sbjct: 29 LGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
+ + N LV + G L D + R+ + ++ G +LH
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK---------QVLSGTTYLH 138
Query: 192 EKVQPPIVHRDVRSSNVLLFD---DFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+ IVHRD++ N+LL D KI DF L+ + ++ LGT Y AP
Sbjct: 139 ---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKER--LGTAYYIAP 192
Query: 249 EYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
E + + +K DV+S GV+L LL G P
Sbjct: 193 E-VLRKKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 23/212 (10%)
Query: 75 LIGEGSYGRVFYAKLTDGTPA----AIKKLDTSSAPEPESDFA---AQLSVVSRLKHEHF 127
++G+G YG+VF + G A+K L + D A A+ +++ +KH
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 128 VELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKG 186
V+L+ Y ++ ++ L+ ++ + G L L R+G+ + + + +A G
Sbjct: 84 VDLI-YAFQTGGKLYLILEYLSGGELFMQLE-REGIFMEDTACF--YLAEISMALG---- 135
Query: 187 LEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
LH+K I++RD++ N++L K+ DF L +S H+ GT Y
Sbjct: 136 --HLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT--FCGTIEYM 188
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
APE M + D +S G ++ ++LTG P
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 119/290 (41%), Gaps = 44/290 (15%)
Query: 76 IGEGSYGRVF---------YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEH 126
+G+G++ ++F Y +L + T +K LD + ES F A S++S+L H+H
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHE-TEVLLKVLDKAHRNYSESFFEAA-SMMSKLSHKH 73
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKG 186
V G C+ + ILV +F GSL L K + W +++VA A
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCIN------ILW--KLEVAKQLAAA 125
Query: 187 LEFLHEKVQPPIVHRDVRSSNVLLF--DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
+ FL E ++H +V + N+LL +D K+ F + + L +
Sbjct: 126 MHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP 182
Query: 245 YHAPEYAMT-GQITQKSDVYSFGVVLLELLTG-RKPVDHTMPKGQQSLVTWATPRLSEDK 302
+ PE + +D +SFG L E+ +G KP+ + Q+ L + ED+
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPL--SALDSQRKL------QFYEDR 234
Query: 303 VKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLL 352
+ P C+ YE D RP+ +++ L L
Sbjct: 235 ----------HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 23/238 (9%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAEI 138
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 139 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 195
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED 301
Y +PE + SD+++ G ++ +L+ G P G + L+ +L D
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 249
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 23/238 (9%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ V A+ L AIK L+ + + V+SRL H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAEI 138
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 139 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 195
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED 301
Y +PE + SD+++ G ++ +L+ G P G + L+ +L D
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 249
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 89/216 (41%), Gaps = 26/216 (12%)
Query: 69 NFGTKALIGEGSYGRVFYAKLT-DGTPAAIKKLDTS-----SAPEPESDFAAQLSVVSRL 122
+F +G GS+GRV + +G A+K L E +D LS+V+
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-- 64
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
H + + G ++ ++ + G L +L + P PV + A
Sbjct: 65 -HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRF----PNPVAKF-----YAAE 114
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
LE+LH K I++RD++ N+LL + KI DF D L GT
Sbjct: 115 VCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL-----CGT 166
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
Y APE T + D +SFG+++ E+L G P
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 23/218 (10%)
Query: 66 LTSNFGTKALIGEGSYGRVFYAK--LTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
+ F ++G G++ VF K LT G A+K + S A +S +++V+ ++K
Sbjct: 7 IRKTFIFMEVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFR-DSSLENEIAVLKKIK 64
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
HE+ V L + + LV Q + G L D + R GV + ++ Q+V A
Sbjct: 65 HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILER-GVYTEKDASLVI--QQVLSA--- 118
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVL 240
+++LHE IVHRD++ N+L ++ K I DF L+ + +
Sbjct: 119 ---VKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM----STAC 168
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
GT GY APE ++ D +S GV+ LL G P
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 76 IGEGSYGRVFYAK--LTDGTPAAIKKLDTSSAPEPE--SDFAAQLSVVSRLKHEHFVELL 131
+G G++G+V K LT G A+K L+ + ++ + +H H ++L
Sbjct: 24 LGVGTFGKVKVGKHELT-GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLY 82
Query: 132 GYCMESNNRILVYQFATMGSLHDVL--HGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
++ +V ++ + G L D + +GR L + ++ G+++
Sbjct: 83 QVISTPSDIFMVMEYVSGGELFDYICKNGR-----------LDEKESRRLFQQILSGVDY 131
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPE 249
H + +VHRD++ NVLL +KIADF L+N SD S G+ Y APE
Sbjct: 132 CHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPE 185
Query: 250 YAMTGQITQ--KSDVYSFGVVLLELLTGRKPVD 280
++G++ + D++S GV+L LL G P D
Sbjct: 186 -VISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 118/290 (40%), Gaps = 44/290 (15%)
Query: 76 IGEGSYGRVF---------YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEH 126
+G+G++ ++F Y +L + T +K LD + ES F A S++S+L H+H
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHE-TEVLLKVLDKAHRNYSESFFEAA-SMMSKLSHKH 73
Query: 127 FVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKG 186
V G C + ILV +F GSL L K + W +++VA A
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCIN------ILW--KLEVAKQLAWA 125
Query: 187 LEFLHEKVQPPIVHRDVRSSNVLLF--DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
+ FL E ++H +V + N+LL +D K+ F + + L +
Sbjct: 126 MHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP 182
Query: 245 YHAPEYAMT-GQITQKSDVYSFGVVLLELLTG-RKPVDHTMPKGQQSLVTWATPRLSEDK 302
+ PE + +D +SFG L E+ +G KP+ + Q+ L + ED+
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPL--SALDSQRKL------QFYEDR 234
Query: 303 VKQCVDPKLNNDYPPXXXXXXXXXXXXCVQYEADFRPNMTIVVKALQPLL 352
+ P C+ YE D RP+ +++ L L
Sbjct: 235 ----------HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 75 LIGEGSYGRVFYAKLTDGTPA----AIKKLDTSSAPEPESDFA---AQLSVVSRLKHEHF 127
++G+G YG+VF + G A+K L + D A A+ +++ +KH
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 128 VELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKG 186
V+L+ Y ++ ++ L+ ++ + G L L R+G+ + + + +A G
Sbjct: 84 VDLI-YAFQTGGKLYLILEYLSGGELFMQLE-REGIFMEDTACF--YLAEISMALG---- 135
Query: 187 LEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
LH+K I++RD++ N++L K+ DF L +S H GT Y
Sbjct: 136 --HLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHX--FCGTIEYM 188
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
APE M + D +S G ++ ++LTG P
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 76 IGEGSYGRVFYAK--LTDGTPAAIKKLDTSSAPEPESDFAA--QLSVVSRLKHEHFVELL 131
+G G+YG V K LT G AIK + SS + A +++V+ +L H + ++L
Sbjct: 12 LGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 132 GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
+ + N LV + G L D + R+ + ++ G +LH
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK---------QVLSGTTYLH 121
Query: 192 EKVQPPIVHRDVRSSNVLLFD---DFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+ IVHRD++ N+LL D KI DF L+ + ++ LGT Y AP
Sbjct: 122 ---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKER--LGTAYYIAP 175
Query: 249 EYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
E + + +K DV+S GV+L LL G P
Sbjct: 176 E-VLRKKYDEKCDVWSCGVILYILLCGYPP 204
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 69 NFGTKALIGEGSYGRVFYA--KLTDGTPAAIKK--LDTSSAPEPESDFAAQLSVVSRLKH 124
NF IGEG+YG V+ A KLT G A+KK LDT + P S ++S++ L H
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP-STAIREISLLKELNH 64
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ V+LL N LV++ L + + G P P++ +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDA-SALTGI-PLPLIK-----SYLFQLL 116
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
+GL F H ++HRD++ N+L+ + K+ADF L ++ R + V+ T
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 171
Query: 245 YHAPEYAMTGQITQKS-DVYSFGVVLLELLTGR 276
Y APE + + + D++S G + E++T R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 23/238 (9%)
Query: 69 NFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPES--DFAAQLSVVSRLKHE 125
+F ++GEGS+ A+ L AIK L+ + + V+SRL H
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 126 HFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA-- 183
FV+L + +A G L + RK + ++++ Y A
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RK---------IGSFDETCTRFYTAEI 139
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
LE+LH K I+HRD++ N+LL +D +I DF S + + + +GT
Sbjct: 140 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED 301
Y +PE + SD+++ G ++ +L+ G P G + L+ +L D
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 250
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 23/217 (10%)
Query: 68 SNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKL--DTSSAPEPESDFAAQLSVVSRLKH 124
++F L+G+G++G+V + G A+K L + A + + + V+ +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 125 EHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
F+ L Y ++++R+ V ++A G L L + V T +R + YGA
Sbjct: 65 P-FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER---------VFT-EERARF-YGA 112
Query: 184 --AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLG 241
LE+LH + +V+RD++ N++L D KI DF L + A + + G
Sbjct: 113 EIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCG 167
Query: 242 TFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
T Y APE + D + GVV+ E++ GR P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 19/206 (9%)
Query: 76 IGEGSYGRV-FYAKLTDGTPAAIKKLDTSSAPEPESD-FAAQLSVVSRLKHEHFVELLGY 133
IG GSYGR + +DG K+LD S E E ++++++ LKH + V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 134 CMESNNRIL--VYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
++ N L V ++ G L V+ +G + L ++V L+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVI-----TKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 192 EKVQ--PPIVHRDVRSSNVLLFDDFKSKIADFNLT---NQSSDTAARLHSTRVLGTFGYH 246
+ ++HRD++ +NV L K+ DF L N D A +GT Y
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF-----VGTPYYM 183
Query: 247 APEYAMTGQITQKSDVYSFGVVLLEL 272
+PE +KSD++S G +L EL
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 13/132 (9%)
Query: 178 KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHST 237
K+A K LE LH K+ ++HRDV+ SNVL+ + K+ DF ++ D+ A+ T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK---T 211
Query: 238 RVLGTFGYHAPEYAMTGQITQ-----KSDVYSFGVVLLELLTGRKPVDHTMPKGQQ--SL 290
G Y APE + ++ Q KSD++S G+ ++EL R P D QQ +
Sbjct: 212 IDAGCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 270
Query: 291 VTWATPRLSEDK 302
V +P+L DK
Sbjct: 271 VEEPSPQLPADK 282
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 19/213 (8%)
Query: 70 FGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
F K +G G++ V A+ G A+K + + ES +++V+ ++KHE+ V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 129 ELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
L N+ LV Q + G L D + KG + L Q + Y
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRI-VEKGFYTEKDASTLI-RQVLDAVY------- 134
Query: 189 FLHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
+LH + IVHRD++ N+L + ++ K I+DF L+ + + ST GT GY
Sbjct: 135 YLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMST-ACGTPGY 188
Query: 246 HAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
APE ++ D +S GV+ LL G P
Sbjct: 189 VAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 23/217 (10%)
Query: 68 SNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKL--DTSSAPEPESDFAAQLSVVSRLKH 124
++F L+G+G++G+V + G A+K L + A + + + V+ +H
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 125 EHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
F+ L Y ++++R+ V ++A G L L + V T +R + YGA
Sbjct: 68 P-FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER---------VFT-EERARF-YGA 115
Query: 184 --AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLG 241
LE+LH + +V+RD++ N++L D KI DF L + A + + G
Sbjct: 116 EIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCG 170
Query: 242 TFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
T Y APE + D + GVV+ E++ GR P
Sbjct: 171 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 32/215 (14%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G YG V+ G A+K SS E +L L+HE+ + + M
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIF--SSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 136 ESNNR----ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
S + L+ + MGSL+D L + + L ++ A GL LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCL------RIVLSIASGLAHLH 122
Query: 192 EKV-----QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARL---HSTRVLGTF 243
++ +P I HRD++S N+L+ + + IAD L S + +L ++ RV GT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTK 181
Query: 244 GYHAPEYA-MTGQIT-----QKSDVYSFGVVLLEL 272
Y APE T Q+ ++ D+++FG+VL E+
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 23/217 (10%)
Query: 68 SNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKL--DTSSAPEPESDFAAQLSVVSRLKH 124
++F L+G+G++G+V + G A+K L + A + + + V+ +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 125 EHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
F+ L Y ++++R+ V ++A G L L + V T +R + YGA
Sbjct: 65 P-FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER---------VFT-EERARF-YGA 112
Query: 184 --AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLG 241
LE+LH + +V+RD++ N++L D KI DF L + A + + G
Sbjct: 113 EIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCG 167
Query: 242 TFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
T Y APE + D + GVV+ E++ GR P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 32/215 (14%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G YG V+ G A+K SS E +L L+HE+ + + M
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIF--SSRDEKSWFRETELYNTVMLRHENILGFIASDM 101
Query: 136 ESNNR----ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
S + L+ + MGSL+D L L +++ A GL LH
Sbjct: 102 TSRHSSTQLWLITHYHEMGSLYDYLQL----------TTLDTVSCLRIVLSIASGLAHLH 151
Query: 192 EKV-----QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARL---HSTRVLGTF 243
++ +P I HRD++S N+L+ + + IAD L S + +L ++ RV GT
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTK 210
Query: 244 GYHAPEYA-MTGQIT-----QKSDVYSFGVVLLEL 272
Y APE T Q+ ++ D+++FG+VL E+
Sbjct: 211 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 27/264 (10%)
Query: 25 GNTQPGGSARGEPRTNVVKTGTPQKALPIEIPQIKLDELNRLTSNFGTKALIGEGSYGRV 84
G+ +P G + EP AL + D + + IG G+YG V
Sbjct: 15 GSAEPPGPVKAEPAHTAASVAAKNLAL---LKARSFDVTFDVGDEYEIIETIGNGAYGVV 71
Query: 85 FYAK--LTDGTPAAIKKL-DTSSAPEPESDFAAQLSVVSRLKHEHFV---ELLGYCMESN 138
A+ LT G AIKK+ + +L ++ KH++ + ++L +
Sbjct: 72 SSARRRLT-GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYG 130
Query: 139 NRILVYQFATM--GSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQP 196
VY + LH ++H ++P LT Y +GL+++H
Sbjct: 131 EFKSVYVVLDLMESDLHQIIHS------SQP---LTLEHVRYFLYQLLRGLKYMHSA--- 178
Query: 197 PIVHRDVRSSNVLLFDDFKSKIADFNLTNQ--SSDTAARLHSTRVLGTFGYHAPEYAMT- 253
++HRD++ SN+L+ ++ + KI DF + +S + T + T Y APE ++
Sbjct: 179 QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL 238
Query: 254 GQITQKSDVYSFGVVLLELLTGRK 277
+ TQ D++S G + E+L R+
Sbjct: 239 HEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 32/215 (14%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G+G YG V+ G A+K SS E +L L+HE+ + + M
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIF--SSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 136 ESNNR----ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
S + L+ + MGSL+D L + + L ++ A GL LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCL------RIVLSIASGLAHLH 122
Query: 192 EKV-----QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARL---HSTRVLGTF 243
++ +P I HRD++S N+L+ + + IAD L S + +L ++ RV GT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTK 181
Query: 244 GYHAPEYA-MTGQIT-----QKSDVYSFGVVLLEL 272
Y APE T Q+ ++ D+++FG+VL E+
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 68 SNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKL--DTSSAPEPESDFAAQLSVVSRLKH 124
++F L+G+G++G+V + G A+K L + A + + + V+ +H
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 125 EHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
F+ L Y ++++R+ V ++A G L L + V T +R + YGA
Sbjct: 70 P-FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER---------VFT-EERARF-YGA 117
Query: 184 --AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLG 241
LE+LH + +V+RD++ N++L D KI DF L + A + G
Sbjct: 118 EIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FCG 172
Query: 242 TFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
T Y APE + D + GVV+ E++ GR P
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 22/221 (9%)
Query: 66 LTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEP--ESDFAAQLSVVSRL 122
+ + + ++G+GS+G V K G A+K + + + ++ ++ +L
Sbjct: 30 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
H + ++L + + LV + T G L D + RK + ++
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR---------Q 140
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLL---FDDFKSKIADFNLTNQSSDTAARLHSTRV 239
G+ ++H + IVHRD++ N+LL D +I DF L S+ A
Sbjct: 141 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGL---STHFEASKKMKDK 194
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
+GT Y APE + G +K DV+S GV+L LL+G P +
Sbjct: 195 IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 42/220 (19%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDF-AAQLSVVSRLKHEHFVELLGYC 134
IG+G +G V+ K G A+K S+ E S F A++ L+HE+ +LG+
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHEN---ILGFI 102
Query: 135 MESNNR-------ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
N LV + GSL D L+ +T +K+A A GL
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY----------TVTVEGMIKLALSTASGL 152
Query: 188 EFLHEKV-----QPPIVHRDVRSSNVLLFDDFKSKIADFNLT---NQSSDTAARLHSTRV 239
LH ++ +P I HRD++S N+L+ + IAD L + ++DT + RV
Sbjct: 153 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 212
Query: 240 LGTFGYHAPEYAMTGQITQK-------SDVYSFGVVLLEL 272
GT Y APE + I K +D+Y+ G+V E+
Sbjct: 213 -GTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKL-DTSSAPEPESDFAAQLSVVSRLKHEHFVELLG 132
+G G+YG V K+T AIK + TS + S +++V+ L H + ++L
Sbjct: 45 LGSGAYGEVLLCRDKVT-HVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
+ + N LV + G L D + R + ++ G+ +LH
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK---------QVLSGVTYLH- 153
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKS---KIADFNLTNQSSDTAARLHSTRVLGTFGYHAPE 249
+ IVHRD++ N+LL K KI DF L S+ + LGT Y APE
Sbjct: 154 --KHNIVHRDLKPENLLLESKEKDALIKIVDFGL---SAVFENQKKMKERLGTAYYIAPE 208
Query: 250 YAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ + +K DV+S GV+L LL G P
Sbjct: 209 -VLRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 68 SNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKL--DTSSAPEPESDFAAQLSVVSRLKH 124
++F L+G+G++G+V + G A+K L + A + + + V+ +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 125 EHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
F+ L Y ++++R+ V ++A G L L + V T +R + YGA
Sbjct: 65 P-FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER---------VFT-EERARF-YGA 112
Query: 184 --AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLG 241
LE+LH + +V+RD++ N++L D KI DF L + A + G
Sbjct: 113 EIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FCG 167
Query: 242 TFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
T Y APE + D + GVV+ E++ GR P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 101/242 (41%), Gaps = 40/242 (16%)
Query: 65 RLTSNFGTKALIGEGSYGRVFYAKLTDGTP-AAIKKLDTSSAPEPESD-FAAQLSVVSRL 122
++ N+ K LIG GSYG V+ A + AIKK++ + ++++++RL
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH-GRKGVQGAEPGPVLTWNQRVK-VA 180
K ++ + L ++ I+ L+ VL ++ P+ Q VK +
Sbjct: 85 KSDYIIRL-------HDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTIL 137
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G +F+HE I+HRD++ +N LL D KI DF L ++ ++ +H L
Sbjct: 138 YNLLLGEKFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLA-RTINSDKDIHIVNDL 193
Query: 241 G------------------------TFGYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTG 275
T Y APE + + T D++S G + ELL
Sbjct: 194 EEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNM 253
Query: 276 RK 277
K
Sbjct: 254 MK 255
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 27/260 (10%)
Query: 31 GSARGEPRTNVVKTGT---PQKALPIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYA 87
G A GEPR+ GT P L + + + ++G+GS+G V
Sbjct: 9 GGAAGEPRSRGHAAGTSGGPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILC 68
Query: 88 K-LTDGTPAAIK---KLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILV 143
K G A+K K + ES ++ ++ +L H + ++L + + LV
Sbjct: 69 KDKITGQECAVKVISKRQVKQKTDKES-LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 127
Query: 144 YQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDV 203
+ T G L D + RK + ++ G+ ++H + IVHRD+
Sbjct: 128 GEVYTGGELFDEIISRKRFSEVDAARIIR---------QVLSGITYMH---KNKIVHRDL 175
Query: 204 RSSNVLL---FDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKS 260
+ N+LL D +I DF L S+ A +GT Y APE + G +K
Sbjct: 176 KPENLLLESKSKDANIRIIDFGL---STHFEASKKMKDKIGTAYYIAPE-VLHGTYDEKC 231
Query: 261 DVYSFGVVLLELLTGRKPVD 280
DV+S GV+L LL+G P +
Sbjct: 232 DVWSTGVILYILLSGCPPFN 251
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 27/260 (10%)
Query: 31 GSARGEPRTNVVKTGT---PQKALPIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYA 87
G A GEPR+ GT P L + + + ++G+GS+G V
Sbjct: 10 GGAAGEPRSRGHAAGTSGGPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILC 69
Query: 88 K-LTDGTPAAIK---KLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILV 143
K G A+K K + ES ++ ++ +L H + ++L + + LV
Sbjct: 70 KDKITGQECAVKVISKRQVKQKTDKES-LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 128
Query: 144 YQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDV 203
+ T G L D + RK + ++ G+ ++H + IVHRD+
Sbjct: 129 GEVYTGGELFDEIISRKRFSEVDAARIIRQ---------VLSGITYMH---KNKIVHRDL 176
Query: 204 RSSNVLL---FDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKS 260
+ N+LL D +I DF L S+ A +GT Y APE + G +K
Sbjct: 177 KPENLLLESKSKDANIRIIDFGL---STHFEASKKMKDKIGTAYYIAPE-VLHGTYDEKC 232
Query: 261 DVYSFGVVLLELLTGRKPVD 280
DV+S GV+L LL+G P +
Sbjct: 233 DVWSTGVILYILLSGCPPFN 252
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 42/220 (19%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDF-AAQLSVVSRLKHEHFVELLGYC 134
IG+G +G V+ K G A+K S+ E S F A++ L+HE+ +LG+
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHEN---ILGFI 69
Query: 135 MESNNR-------ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
N LV + GSL D L+ +T +K+A A GL
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR----------YTVTVEGMIKLALSTASGL 119
Query: 188 EFLHEKV-----QPPIVHRDVRSSNVLLFDDFKSKIADFNLT---NQSSDTAARLHSTRV 239
LH ++ +P I HRD++S N+L+ + IAD L + ++DT + RV
Sbjct: 120 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 179
Query: 240 LGTFGYHAPEYAMTGQITQK-------SDVYSFGVVLLEL 272
GT Y APE + I K +D+Y+ G+V E+
Sbjct: 180 -GTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 27/213 (12%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPE--SDFAAQLSVVSRLKHEHFVELL 131
+G G++G+V +LT G A+K L+ + ++ + +H H ++L
Sbjct: 19 LGVGTFGKVKIGEHQLT-GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLY 77
Query: 132 GYCMESNNRILVYQFATMGSLHDVL--HGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
+ +V ++ + G L D + HGR V+ E + Q++ A +++
Sbjct: 78 QVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLF---QQILSA------VDY 126
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPE 249
H + +VHRD++ NVLL +KIADF L+N SD S G+ Y APE
Sbjct: 127 CHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE 180
Query: 250 YAMTGQITQ--KSDVYSFGVVLLELLTGRKPVD 280
++G++ + D++S GV+L LL G P D
Sbjct: 181 -VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 42/220 (19%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDF-AAQLSVVSRLKHEHFVELLGYC 134
IG+G +G V+ K G A+K S+ E S F A++ L+HE+ +LG+
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHEN---ILGFI 64
Query: 135 MESNNR-------ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
N LV + GSL D L+ +T +K+A A GL
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR----------YTVTVEGMIKLALSTASGL 114
Query: 188 EFLHEKV-----QPPIVHRDVRSSNVLLFDDFKSKIADFNLT---NQSSDTAARLHSTRV 239
LH ++ +P I HRD++S N+L+ + IAD L + ++DT + RV
Sbjct: 115 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 174
Query: 240 LGTFGYHAPEYAMTGQITQK-------SDVYSFGVVLLEL 272
GT Y APE + I K +D+Y+ G+V E+
Sbjct: 175 -GTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 42/220 (19%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDF-AAQLSVVSRLKHEHFVELLGYC 134
IG+G +G V+ K G A+K S+ E S F A++ L+HE+ +LG+
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHEN---ILGFI 89
Query: 135 MESNNR-------ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
N LV + GSL D L+ +T +K+A A GL
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR----------YTVTVEGMIKLALSTASGL 139
Query: 188 EFLHEKV-----QPPIVHRDVRSSNVLLFDDFKSKIADFNLT---NQSSDTAARLHSTRV 239
LH ++ +P I HRD++S N+L+ + IAD L + ++DT + RV
Sbjct: 140 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 199
Query: 240 LGTFGYHAPEYAMTGQITQK-------SDVYSFGVVLLEL 272
GT Y APE + I K +D+Y+ G+V E+
Sbjct: 200 -GTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 42/220 (19%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDF-AAQLSVVSRLKHEHFVELLGYC 134
IG+G +G V+ K G A+K S+ E S F A++ L+HE+ +LG+
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHEN---ILGFI 66
Query: 135 MESNNR-------ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
N LV + GSL D L+ +T +K+A A GL
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR----------YTVTVEGMIKLALSTASGL 116
Query: 188 EFLHEKV-----QPPIVHRDVRSSNVLLFDDFKSKIADFNLT---NQSSDTAARLHSTRV 239
LH ++ +P I HRD++S N+L+ + IAD L + ++DT + RV
Sbjct: 117 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 176
Query: 240 LGTFGYHAPEYAMTGQITQK-------SDVYSFGVVLLEL 272
GT Y APE + I K +D+Y+ G+V E+
Sbjct: 177 -GTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 68 SNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKL--DTSSAPEPESDFAAQLSVVSRLKH 124
++F L+G+G++G+V + G A+K L + A + + + V+ +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 125 EHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
F+ L Y ++++R+ V ++A G L L + V T +R + YGA
Sbjct: 65 P-FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER---------VFT-EERARF-YGA 112
Query: 184 --AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLG 241
LE+LH + +V+RD++ N++L D KI DF L + A + G
Sbjct: 113 EIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FCG 167
Query: 242 TFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
T Y APE + D + GVV+ E++ GR P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 97/233 (41%), Gaps = 37/233 (15%)
Query: 68 SNFGTKALIGEGSYGRVF--YAKLTDGTPAAIKKLDTSSAPEPESD-FAAQLSVVSRLKH 124
N+ K LIG GSYG V+ Y K T+ AIKK++ + ++++++RLK
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKN-VAIKKVNRMFEDLIDCKRILREITILNRLKS 84
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLH-GRKGVQGAEPGPVLTWNQRVK-VAYG 182
++ + L + + L+ VL ++ P+ + +K + Y
Sbjct: 85 DYIIRLYDLIIPDD-------LLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYN 137
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNL---TNQSSDTAA------- 232
G F+HE I+HRD++ +N LL D K+ DF L N DT
Sbjct: 138 LLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEEN 194
Query: 233 ----------RLHSTRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLT 274
+ T + T Y APE + + KS D++S G + ELL
Sbjct: 195 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 68 SNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKL--DTSSAPEPESDFAAQLSVVSRLKH 124
++F L+G+G++G+V + G A+K L + A + + + V+ +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 125 EHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
F+ L Y ++++R+ V ++A G L L + V T +R + YGA
Sbjct: 65 P-FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER---------VFT-EERARF-YGA 112
Query: 184 --AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLG 241
LE+LH + +V+RD++ N++L D KI DF L + A + G
Sbjct: 113 EIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FCG 167
Query: 242 TFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
T Y APE + D + GVV+ E++ GR P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 42/220 (19%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDF-AAQLSVVSRLKHEHFVELLGYC 134
IG+G +G V+ K G A+K S+ E S F A++ L+HE+ +LG+
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHEN---ILGFI 63
Query: 135 MESNNR-------ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
N LV + GSL D L+ +T +K+A A GL
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR----------YTVTVEGMIKLALSTASGL 113
Query: 188 EFLHEKV-----QPPIVHRDVRSSNVLLFDDFKSKIADFNLT---NQSSDTAARLHSTRV 239
LH ++ +P I HRD++S N+L+ + IAD L + ++DT + RV
Sbjct: 114 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 173
Query: 240 LGTFGYHAPEYAMTGQITQK-------SDVYSFGVVLLEL 272
GT Y APE + I K +D+Y+ G+V E+
Sbjct: 174 -GTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 27/213 (12%)
Query: 76 IGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPE--SDFAAQLSVVSRLKHEHFVELL 131
+G G++G+V +LT G A+K L+ + ++ + +H H ++L
Sbjct: 19 LGVGTFGKVKIGEHQLT-GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLY 77
Query: 132 GYCMESNNRILVYQFATMGSLHDVL--HGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
+ +V ++ + G L D + HGR V+ E + Q++ A +++
Sbjct: 78 QVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLF---QQILSA------VDY 126
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPE 249
H + +VHRD++ NVLL +KIADF L+N SD S G+ Y APE
Sbjct: 127 CHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE 180
Query: 250 YAMTGQITQ--KSDVYSFGVVLLELLTGRKPVD 280
++G++ + D++S GV+L LL G P D
Sbjct: 181 -VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 27/211 (12%)
Query: 75 LIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPE-SDFAAQLSVVSRLKHEHFVELLGY 133
LIG+G +G+V++ + AI+ +D E + F ++ + +HE+ V +G
Sbjct: 40 LIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGA 97
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
CM + ++ +L+ V+ K VL N+ ++A KG+ +LH K
Sbjct: 98 CMSPPHLAIITSLCKGRTLYSVVRDAK--------IVLDVNKTRQIAQEIVKGMGYLHAK 149
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAA--RLHSTRVLGTFGYH-APEY 250
I+H+D++S NV +D+ K I DF L + S A R R+ + H APE
Sbjct: 150 ---GILHKDLKSKNV-FYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEI 205
Query: 251 AMTGQ---------ITQKSDVYSFGVVLLEL 272
++ SDV++ G + EL
Sbjct: 206 IRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Query: 76 IGEGSYGRV-FYAKLTDGTPAAIKKLDTSSAPEPESD-FAAQLSVVSRLKHEHFVELLGY 133
IG GSYGR + +DG K+LD S E E ++++++ LKH + V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 134 CMESNNRIL--VYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
++ N L V ++ G L V+ +G + L ++V L+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVI-----TKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 192 EKVQ--PPIVHRDVRSSNVLLFDDFKSKIADFNLTN-QSSDTAARLHSTRVLGTFGYHAP 248
+ ++HRD++ +NV L K+ DF L + DT+ + +GT Y +P
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS---FAKTFVGTPYYMSP 185
Query: 249 EYAMTGQITQKSDVYSFGVVLLEL 272
E +KSD++S G +L EL
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 23/210 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTP-AAIKK--LDTSSAPEPESDFAAQLSVVSRLKHEHFVELLG 132
IGEG+YG VF AK + A+K+ LD P S ++ ++ LKH++ V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELKHKNIVRLHD 68
Query: 133 YCMESNNRILVYQFAT--MGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFL 190
LV++F + D +G +P V ++ + KGL F
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNG-----DLDPEIVKSF------LFQLLKGLGFC 117
Query: 191 HEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEY 250
H + ++HRD++ N+L+ + + K+ADF L ++ R +S V+ T Y P+
Sbjct: 118 HSR---NVLHRDLKPQNLLINRNGELKLADFGLA-RAFGIPVRCYSAEVV-TLWYRPPDV 172
Query: 251 AMTGQITQKS-DVYSFGVVLLELLTGRKPV 279
++ S D++S G + EL +P+
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 27/264 (10%)
Query: 25 GNTQPGGSARGEPRTNVVKTGTPQKALPIEIPQIKLDELNRLTSNFGTKALIGEGSYGRV 84
G+ +P G + EP AL + D + + IG G+YG V
Sbjct: 14 GSAEPPGPVKAEPAHTAASVAAKNLAL---LKARSFDVTFDVGDEYEIIETIGNGAYGVV 70
Query: 85 FYAK--LTDGTPAAIKKL-DTSSAPEPESDFAAQLSVVSRLKHEHFV---ELLGYCMESN 138
A+ LT G AIKK+ + +L ++ KH++ + ++L +
Sbjct: 71 SSARRRLT-GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYG 129
Query: 139 NRILVYQFATM--GSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQP 196
VY + LH ++H ++P LT Y +GL+++H
Sbjct: 130 EFKSVYVVLDLMESDLHQIIHS------SQP---LTLEHVRYFLYQLLRGLKYMHSA--- 177
Query: 197 PIVHRDVRSSNVLLFDDFKSKIADFNLTNQ--SSDTAARLHSTRVLGTFGYHAPEYAMT- 253
++HRD++ SN+L+ ++ + KI DF + +S + T + T Y APE ++
Sbjct: 178 QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL 237
Query: 254 GQITQKSDVYSFGVVLLELLTGRK 277
+ TQ D++S G + E+L R+
Sbjct: 238 HEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Query: 76 IGEGSYGRV-FYAKLTDGTPAAIKKLDTSSAPEPESD-FAAQLSVVSRLKHEHFVELLGY 133
IG GSYGR + +DG K+LD S E E ++++++ LKH + V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 134 CMESNNRIL--VYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
++ N L V ++ G L V+ +G + L ++V L+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVI-----TKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 192 EKVQ--PPIVHRDVRSSNVLLFDDFKSKIADFNLTN-QSSDTAARLHSTRVLGTFGYHAP 248
+ ++HRD++ +NV L K+ DF L + DT+ + +GT Y +P
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS---FAKAFVGTPYYMSP 185
Query: 249 EYAMTGQITQKSDVYSFGVVLLEL 272
E +KSD++S G +L EL
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 34/220 (15%)
Query: 76 IGEGSYGRVFYAKLTDG-TPAAIKKL------------DTSSAPEPESDFAAQLSVVSRL 122
+G G+YG V K +G + AIK + D + + + ++S++ L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
H + ++L + LV +F G L + + R + ++
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMK---------Q 154
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDD---FKSKIADFNLTNQ-SSDTAARLHSTR 238
G+ +LH + IVHRD++ N+LL + KI DF L++ S D R
Sbjct: 155 ILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR--- 208
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
LGT Y APE + + +K DV+S GV++ LL G P
Sbjct: 209 -LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 24/235 (10%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLT--DGT--PAAIKKL--DTSSAPEPESDF 112
KL+++ F ++G+G +G V A+L DG+ A+K L D ++ + E +F
Sbjct: 14 KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIE-EF 72
Query: 113 AAQLSVVSRLKHEHFVELLGYCMESNNR------ILVYQFATMGSLHDVLHGRKGVQGAE 166
+ + + H H +L+G + S + +++ F G LH L + +
Sbjct: 73 LREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPF 132
Query: 167 PGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ 226
P+ T V+ A G+E+L + +HRD+ + N +L +D +ADF L+ +
Sbjct: 133 NLPLQTL---VRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRK 186
Query: 227 --SSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
S D + ++++ + A E T SDV++FGV + E++T G+ P
Sbjct: 187 IYSGDYYRQGCASKL--PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 102/234 (43%), Gaps = 31/234 (13%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLS 117
K +++ +LTS L+GEG+Y +V A L +G A+K ++ + F +
Sbjct: 9 KFEDMYKLTSE-----LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVET 63
Query: 118 VVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRV 177
+ +++ +EL+ + + LV++ GS+ + +K E
Sbjct: 64 LYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREAS--------- 114
Query: 178 KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS---KIADFNL-----TNQSSD 229
+V A L+FLH K I HRD++ N+L K KI DF+L N S
Sbjct: 115 RVVRDVAAALDFLHTK---GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCT 171
Query: 230 TAARLHSTRVLGTFGYHAPEYA--MTGQIT---QKSDVYSFGVVLLELLTGRKP 278
T G+ Y APE T Q T ++ D++S GVVL +L+G P
Sbjct: 172 PITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 118/271 (43%), Gaps = 46/271 (16%)
Query: 65 RLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
R S+F A++G+G++G+V A+ D AIKK+ E S +++ +++ L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI--RHTEEKLSTILSEVMLLASLN 60
Query: 124 HEHFVELLGYCMESNNRI-------------LVYQFATMGSLHDVLHGRKGVQGAEPGPV 170
H++ V +E N + + ++ +L+D++H Q +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE--- 117
Query: 171 LTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTN--QSS 228
W ++ + L ++H + I+HRD++ N+ + + KI DF L S
Sbjct: 118 -YW----RLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 229 DTAARLHS----------TRVLGTFGYHAPEYAM-TGQITQKSDVYSFGVVLLELL---- 273
+L S T +GT Y A E TG +K D+YS G++ E++
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFS 229
Query: 274 TGRKPVDHTMPKGQQSLVTWATPRLSEDKVK 304
TG + V+ + K +S+ P ++K+K
Sbjct: 230 TGMERVN--ILKKLRSVSIEFPPDFDDNKMK 258
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 117/267 (43%), Gaps = 27/267 (10%)
Query: 26 NTQPGGSARGEPRTNVVKTGTPQKALPIEIPQIKLDE-LNRLTSN-FGTKALIGEGSYGR 83
T G + E ++G+P E ++ L + +R+T N F L+G+G++G+
Sbjct: 107 QTVADGLKKQEEEEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGK 166
Query: 84 VFYAK-LTDGTPAAIK--KLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNR 140
V K G A+K K + A + + + V+ +H F+ L Y ++++R
Sbjct: 167 VILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP-FLTALKYSFQTHDR 225
Query: 141 I-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA--AKGLEFLHEKVQPP 197
+ V ++A G L L + +++ YGA L++LH +
Sbjct: 226 LCFVMEYANGGELFFHLSRER-----------VFSEDRARFYGAEIVSALDYLHS--EKN 272
Query: 198 IVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQIT 257
+V+RD++ N++L D KI DF L + A + + GT Y APE
Sbjct: 273 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEVLEDNDYG 330
Query: 258 QKSDVYSFGVVLLELLTGRKPV---DH 281
+ D + GVV+ E++ GR P DH
Sbjct: 331 RAVDWWGLGVVMYEMMCGRLPFYNQDH 357
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 24/222 (10%)
Query: 66 LTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIK---KLDTSSAPEPESDFAAQLSVVSR 121
+ + + ++G+GS+G V K G A+K K + ES ++ ++ +
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES-LLREVQLLKQ 82
Query: 122 LKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAY 181
L H + ++L + + LV + T G L D + RK + ++
Sbjct: 83 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR--------- 133
Query: 182 GAAKGLEFLHEKVQPPIVHRDVRSSNVLL---FDDFKSKIADFNLTNQSSDTAARLHSTR 238
G+ ++H + IVHRD++ N+LL D +I DF L S+ A
Sbjct: 134 QVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGL---STHFEASKKMKD 187
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
+GT Y APE + G +K DV+S GV+L LL+G P +
Sbjct: 188 KIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 26/228 (11%)
Query: 64 NRLTSN-FGTKALIGEGSYGRVFYAK-LTDGTPAAIK--KLDTSSAPEPESDFAAQLSVV 119
+R+T N F L+G+G++G+V K G A+K K + A + + + V+
Sbjct: 143 HRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 202
Query: 120 SRLKHEHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVK 178
+H F+ L Y ++++R+ V ++A G L L + +++
Sbjct: 203 QNSRHP-FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-----------VFSEDRA 250
Query: 179 VAYGA--AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
YGA L++LH + +V+RD++ N++L D KI DF L + A + +
Sbjct: 251 RFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 308
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPV---DH 281
GT Y APE + D + GVV+ E++ GR P DH
Sbjct: 309 --FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 354
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 24/210 (11%)
Query: 76 IGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVE----L 130
IGEG+YG V A T AIKK+ ++ ++ R +HE+ + L
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 131 LGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFL 190
+E+ + + Q L+ +L ++ L+ + Y +GL+++
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQ----------LSNDHICYFLYQILRGLKYI 160
Query: 191 HEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNL---TNQSSDTAARLHSTRVLGTFGYHA 247
H ++HRD++ SN+L+ KI DF L + D L T + T Y A
Sbjct: 161 HSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFL--TEXVATRWYRA 215
Query: 248 PEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
PE + + T+ D++S G +L E+L+ R
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 96/226 (42%), Gaps = 21/226 (9%)
Query: 62 ELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKL-----DTSSAPEPESDFAAQ- 115
EL+ + S + + I GSYG V ++G P AIK++ D + F +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 116 -LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDV--LHGRKGVQGAEPGPVLT 172
L + L H H +LG + + ++ M L+ V L Q ++
Sbjct: 76 VLREIRLLNHFHHPNILGL----RDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVI 131
Query: 173 WNQRVK-VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTA 231
Q ++ Y GL LHE +VHRD+ N+LL D+ I DFNL + + A
Sbjct: 132 SPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDTADA 188
Query: 232 ARLHSTRVLGTFGYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
+ H + Y APE M + T+ D++S G V+ E+ +
Sbjct: 189 NKTH---YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 96/226 (42%), Gaps = 21/226 (9%)
Query: 62 ELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKL-----DTSSAPEPESDFAAQ- 115
EL+ + S + + I GSYG V ++G P AIK++ D + F +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 116 -LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDV--LHGRKGVQGAEPGPVLT 172
L + L H H +LG + + ++ M L+ V L Q ++
Sbjct: 76 VLREIRLLNHFHHPNILGL----RDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVI 131
Query: 173 WNQRVK-VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTA 231
Q ++ Y GL LHE +VHRD+ N+LL D+ I DFNL + + A
Sbjct: 132 SPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDTADA 188
Query: 232 ARLHSTRVLGTFGYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
+ H + Y APE M + T+ D++S G V+ E+ +
Sbjct: 189 NKTH---YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 22/215 (10%)
Query: 70 FGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+ + IGEG+YG V A + AIKK+ ++ ++ R +HE+ +
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 129 ELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL-----TWNQRVKVAYGA 183
+ N+ I M ++ V H + GA+ +L + + Y
Sbjct: 105 GI-------NDIIRAPTIEQMKDVYLVTH----LMGADLYKLLKTQHLSNDHICYFLYQI 153
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGT 242
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 154 LRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 243 FGYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 178 KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHST 237
K+A K LE LH K+ ++HRDV+ SNVL+ + K+ DF ++ D A+
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 238 RVLGTFGYHAPEYAMTGQITQ-----KSDVYSFGVVLLELLTGRKPVDHTMPKGQQ--SL 290
G Y APE + ++ Q KSD++S G+ ++EL R P D QQ +
Sbjct: 171 ---GCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226
Query: 291 VTWATPRLSEDK 302
V +P+L DK
Sbjct: 227 VEEPSPQLPADK 238
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 68 SNFGTKALIGEGSYGRVFYA--KLTDGTPAA-IKKLDTSSAPEPESDFAAQLSVVSRLKH 124
++F ++G+GS+G+V + K TD A I K D + + V++
Sbjct: 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 400
Query: 125 EHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
F+ L C ++ +R+ V ++ G L + H ++ + EP V A
Sbjct: 401 PPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVF-------YAAEI 451
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
A GL FL K I++RD++ NV+L + KIADF + + + + + GT
Sbjct: 452 AIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE--NIWDGVTTKXFCGTP 506
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
Y APE + D ++FGV+L E+L G+ P +
Sbjct: 507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 24/221 (10%)
Query: 65 RLTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPE-SDFAAQLSVVSRL 122
+ + N+ K +G+G++ V T G A K ++T + + + +L
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRV--KVA 180
+H + V L E + LV+ T G L + + R+ A+ + Q++ +A
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI---QQILESIA 119
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS---KIADFNLTNQSSDTAARLHST 237
Y + G IVHR+++ N+LL K K+ADF L + +D+ A H
Sbjct: 120 YCHSNG-----------IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHG- 166
Query: 238 RVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
GT GY +PE ++ D+++ GV+L LL G P
Sbjct: 167 -FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 24/221 (10%)
Query: 65 RLTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPE-SDFAAQLSVVSRL 122
+ + N+ K +G+G++ V T G A K ++T + + + +L
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRV--KVA 180
+H + V L E + LV+ T G L + + R+ A+ + Q++ +A
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI---QQILESIA 119
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS---KIADFNLTNQSSDTAARLHST 237
Y + G IVHR+++ N+LL K K+ADF L + +D+ A H
Sbjct: 120 YCHSNG-----------IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHG- 166
Query: 238 RVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
GT GY +PE ++ D+++ GV+L LL G P
Sbjct: 167 -FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 24/221 (10%)
Query: 65 RLTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPE-SDFAAQLSVVSRL 122
+ + N+ K +G+G++ V T G A K ++T + + + +L
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRV--KVA 180
+H + V L E + LV+ T G L + + R+ A+ + Q++ +A
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI---QQILESIA 118
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS---KIADFNLTNQSSDTAARLHST 237
Y + G IVHR+++ N+LL K K+ADF L + +D+ A H
Sbjct: 119 YCHSNG-----------IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHG- 165
Query: 238 RVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
GT GY +PE ++ D+++ GV+L LL G P
Sbjct: 166 -FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 24/229 (10%)
Query: 57 QIKLDELNRLTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPE-SDFAA 114
+ ++ + + N+ K +G+G++ V T G A K ++T +
Sbjct: 18 EFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER 77
Query: 115 QLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWN 174
+ + +L+H + V L E + LV+ T G L + + R+ A+ +
Sbjct: 78 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI--- 134
Query: 175 QRV--KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS---KIADFNLTNQSSD 229
Q++ +AY + G IVHR+++ N+LL K K+ADF L + +D
Sbjct: 135 QQILESIAYCHSNG-----------IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183
Query: 230 TAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ A H GT GY +PE ++ D+++ GV+L LL G P
Sbjct: 184 SEA-WHG--FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 23/210 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTP-AAIKK--LDTSSAPEPESDFAAQLSVVSRLKHEHFVELLG 132
IGEG+YG VF AK + A+K+ LD P S ++ ++ LKH++ V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELKHKNIVRLHD 68
Query: 133 YCMESNNRILVYQFAT--MGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFL 190
LV++F + D +G +P V ++ + KGL F
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNG-----DLDPEIVKSF------LFQLLKGLGFC 117
Query: 191 HEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEY 250
H + ++HRD++ N+L+ + + K+A+F L ++ R +S V+ T Y P+
Sbjct: 118 HSR---NVLHRDLKPQNLLINRNGELKLANFGLA-RAFGIPVRCYSAEVV-TLWYRPPDV 172
Query: 251 AMTGQITQKS-DVYSFGVVLLELLTGRKPV 279
++ S D++S G + EL +P+
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 87/225 (38%), Gaps = 29/225 (12%)
Query: 67 TSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDF-------AAQLSVV 119
TS + A IG G+YG V+ A+ D L + P E A L +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKAR--DPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 120 SRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKV 179
+H + V L+ C S + V + P P L +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTD---REIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR- 238
+GL+FLH IVHRD++ N+L+ K+ADF L AR++S +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL--------ARIYSYQM 166
Query: 239 ----VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
V+ T Y APE + D++S G + E+ RKP+
Sbjct: 167 ALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 23/223 (10%)
Query: 63 LNRLTSN-FGTKALIGEGSYGRVFYAK-LTDGTPAAIK--KLDTSSAPEPESDFAAQLSV 118
+ R+T N F L+G+G++G+V K G A+K K + A + + + V
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 62
Query: 119 VSRLKHEHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRV 177
+ +H F+ L Y ++++R+ V ++A G L L + +++
Sbjct: 63 LQNSRHP-FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-----------VFSEDR 110
Query: 178 KVAYGA--AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
YGA L++LH + +V+RD++ N++L D KI DF L + A +
Sbjct: 111 ARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 168
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
GT Y APE + D + GVV+ E++ GR P
Sbjct: 169 X--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 24/222 (10%)
Query: 66 LTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIK---KLDTSSAPEPESDFAAQLSVVSR 121
+ + + ++G+GS+G V K G A+K K + ES ++ ++ +
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES-LLREVQLLKQ 82
Query: 122 LKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAY 181
L H + +L + + LV + T G L D + RK + ++
Sbjct: 83 LDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR--------- 133
Query: 182 GAAKGLEFLHEKVQPPIVHRDVRSSNVLL---FDDFKSKIADFNLTNQSSDTAARLHSTR 238
G+ + H + IVHRD++ N+LL D +I DF L S+ A
Sbjct: 134 QVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGL---STHFEASKKXKD 187
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
+GT Y APE + G +K DV+S GV+L LL+G P +
Sbjct: 188 KIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 23/222 (10%)
Query: 64 NRLTSN-FGTKALIGEGSYGRVFYAK-LTDGTPAAIK--KLDTSSAPEPESDFAAQLSVV 119
+R+T N F L+G+G++G+V K G A+K K + A + + + V+
Sbjct: 3 SRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 62
Query: 120 SRLKHEHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVK 178
+H F+ L Y ++++R+ V ++A G L L + +++
Sbjct: 63 QNSRHP-FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-----------VFSEDRA 110
Query: 179 VAYGA--AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
YGA L++LH + +V+RD++ N++L D KI DF L + A +
Sbjct: 111 RFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX 168
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
GT Y APE + D + GVV+ E++ GR P
Sbjct: 169 --FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 87/218 (39%), Gaps = 15/218 (6%)
Query: 67 TSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPE--PESDF--AAQLSVVSR 121
TS + A IG G+YG V+ A+ G A+K + + E P S A L +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 122 LKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAY 181
+H + V L+ C S + V + P P L +
Sbjct: 63 FEHPNVVRLMDVCATSRTD---REIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 182 GAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLG 241
+GL+FLH IVHRD++ N+L+ K+ADF L S A V+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP---VVV 173
Query: 242 TFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
T Y APE + D++S G + E+ RKP+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 91/223 (40%), Gaps = 25/223 (11%)
Query: 67 TSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPE--PESDF--AAQLSVVSR 121
TS + A IG G+YG V+ A+ G A+K + + E P S A L +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 122 LKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAY 181
+H + V L+ C S + V + P P L +
Sbjct: 63 FEHPNVVRLMDVCATSRTD---REIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 182 GAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR--- 238
+GL+FLH IVHRD++ N+L+ K+ADF L AR++S +
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL--------ARIYSYQMAL 168
Query: 239 --VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
V+ T Y APE + D++S G + E+ RKP+
Sbjct: 169 APVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 68 SNFGTKALIGEGSYGRVFYA--KLTDGTPAA-IKKLDTSSAPEPESDFAAQLSVVSRLKH 124
++F ++G+GS+G+V + K TD A I K D + + V++
Sbjct: 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 79
Query: 125 EHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
F+ L C ++ +R+ V ++ G L + H ++ + EP V A
Sbjct: 80 PPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVF-------YAAEI 130
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
A GL FL K I++RD++ NV+L + KIADF + + + + + GT
Sbjct: 131 AIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE--NIWDGVTTKXFCGTP 185
Query: 244 GYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
Y APE + D ++FGV+L E+L G+ P +
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 39/227 (17%)
Query: 76 IGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFA-AQLSVVSRLKHEHFVELLGY 133
+G G+YG V A G AIKKL E + A +L ++ ++HE+ + LL
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 134 CM------ESNNRILVYQF--ATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVK-VAYGAA 184
+ + LV F +G L + H + G R++ + Y
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKL--MKHEKLG------------EDRIQFLVYQML 138
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
KGL ++H I+HRD++ N+ + +D + KI DF L Q+ TR
Sbjct: 139 KGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----W 190
Query: 245 YHAPEYAMTG-QITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSL 290
Y APE + + TQ D++S G ++ E++TG+ T+ KG L
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK-----TLFKGSDHL 232
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 65 RLTSN-FGTKALIGEGSYGRVFYAK-LTDGTPAAIK--KLDTSSAPEPESDFAAQLSVVS 120
R+T N F L+G+G++G+V K G A+K K + A + + + V+
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 121 RLKHEHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKV 179
+H F+ L Y ++++R+ V ++A G L L + +++
Sbjct: 66 NSRHP-FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-----------VFSEDRAR 113
Query: 180 AYGA--AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHST 237
YGA L++LH + +V+RD++ N++L D KI DF L + A +
Sbjct: 114 FYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX- 170
Query: 238 RVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
GT Y APE + D + GVV+ E++ GR P
Sbjct: 171 -FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 21/230 (9%)
Query: 53 IEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTP-AAIKKLDTSSAPEPESD 111
+E P+ K E R +F + ++G G++ V A+ AIK + + E
Sbjct: 5 VEGPRWKQAEDIRDIYDF--RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGS 62
Query: 112 FAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL 171
+++V+ ++KH + V L + L+ Q + G L D + E G
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI--------VEKG-FY 113
Query: 172 TWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSS 228
T ++ + +++LH+ IVHRD++ N+L + +D K I+DF L+ +
Sbjct: 114 TERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KME 169
Query: 229 DTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
D + L + GT GY APE ++ D +S GV+ LL G P
Sbjct: 170 DPGSVLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 27/244 (11%)
Query: 57 QIKLDELN-RLTSN-FGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFA 113
Q K ELN LT N F +IG G +G V+ + D G A+K LD + +
Sbjct: 176 QWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL 235
Query: 114 A-----QLSVVSRLKHEHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEP 167
A LS+VS F+ + Y + +++ + G LH L ++
Sbjct: 236 ALNERIMLSLVS-TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--------SQH 286
Query: 168 GPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQS 227
G + R A GLE +H + +V+RD++ +N+LL + +I+D L
Sbjct: 287 GVFSEADMRFYAA-EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF 342
Query: 228 SDTAARLHSTRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDHTMPKG 286
S + H++ +GT GY APE G S D +S G +L +LL G P K
Sbjct: 343 S--KKKPHAS--VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
Query: 287 QQSL 290
+ +
Sbjct: 399 KHEI 402
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 27/244 (11%)
Query: 57 QIKLDELN-RLTSN-FGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFA 113
Q K ELN LT N F +IG G +G V+ + D G A+K LD + +
Sbjct: 176 QWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL 235
Query: 114 A-----QLSVVSRLKHEHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEP 167
A LS+VS F+ + Y + +++ + G LH L ++
Sbjct: 236 ALNERIMLSLVSTGDCP-FIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--------SQH 286
Query: 168 GPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQS 227
G + R A GLE +H + +V+RD++ +N+LL + +I+D L
Sbjct: 287 GVFSEADMRFYAA-EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF 342
Query: 228 SDTAARLHSTRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDHTMPKG 286
S + H++ +GT GY APE G S D +S G +L +LL G P K
Sbjct: 343 S--KKKPHAS--VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
Query: 287 QQSL 290
+ +
Sbjct: 399 KHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 27/244 (11%)
Query: 57 QIKLDELN-RLTSN-FGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFA 113
Q K ELN LT N F +IG G +G V+ + D G A+K LD + +
Sbjct: 176 QWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL 235
Query: 114 A-----QLSVVSRLKHEHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEP 167
A LS+VS F+ + Y + +++ + G LH L ++
Sbjct: 236 ALNERIMLSLVSTGDCP-FIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--------SQH 286
Query: 168 GPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQS 227
G + R A GLE +H + +V+RD++ +N+LL + +I+D L
Sbjct: 287 GVFSEADMRFYAA-EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF 342
Query: 228 SDTAARLHSTRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDHTMPKG 286
S + H++ +GT GY APE G S D +S G +L +LL G P K
Sbjct: 343 S--KKKPHAS--VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
Query: 287 QQSL 290
+ +
Sbjct: 399 KHEI 402
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 27/244 (11%)
Query: 57 QIKLDELN-RLTSN-FGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFA 113
Q K ELN LT N F +IG G +G V+ + D G A+K LD + +
Sbjct: 175 QWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL 234
Query: 114 A-----QLSVVSRLKHEHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEP 167
A LS+VS F+ + Y + +++ + G LH L ++
Sbjct: 235 ALNERIMLSLVS-TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--------SQH 285
Query: 168 GPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQS 227
G + R A GLE +H + +V+RD++ +N+LL + +I+D L
Sbjct: 286 GVFSEADMRFYAA-EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF 341
Query: 228 SDTAARLHSTRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDHTMPKG 286
S + H++ +GT GY APE G S D +S G +L +LL G P K
Sbjct: 342 S--KKKPHAS--VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 397
Query: 287 QQSL 290
+ +
Sbjct: 398 KHEI 401
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 21/230 (9%)
Query: 53 IEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTP-AAIKKLDTSSAPEPESD 111
+E P+ K E R +F + ++G G++ V A+ AIK + + E
Sbjct: 5 VEGPRWKQAEDIRDIYDF--RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS 62
Query: 112 FAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL 171
+++V+ ++KH + V L + L+ Q + G L D + E G
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI--------VEKG-FY 113
Query: 172 TWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSS 228
T ++ + +++LH+ IVHRD++ N+L + +D K I+DF L+ +
Sbjct: 114 TERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KME 169
Query: 229 DTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
D + L + GT GY APE ++ D +S GV+ LL G P
Sbjct: 170 DPGSVLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 36/214 (16%)
Query: 76 IGEGSYGRV---FYAKLTDGTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G G+YG V + A+L A+KKL S + +L ++ LKHE+ + L
Sbjct: 28 VGSGAYGSVCSAYDARLRQKV--AVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 84
Query: 131 LGYCMESNNRILVYQFATMGSLHDV--LHGRKGVQGAEPGPVLTW----NQRVK-VAYGA 183
L F S+ D ++ + GA+ ++ ++ V+ + Y
Sbjct: 85 LDV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL 132
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
+GL+++H I+HRD++ SNV + +D + +I DF L Q+ + T + T
Sbjct: 133 LRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEM-----TGYVATR 184
Query: 244 GYHAPEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
Y APE + Q D++S G ++ ELL G+
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 58/249 (23%)
Query: 56 PQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQ 115
P + LD L L LIG G YG V+ L D P A+K ++ +F +
Sbjct: 8 PSLDLDNLKLLE-------LIGRGRYGAVYKGSL-DERPVAVKVFSFAN----RQNFINE 55
Query: 116 LSV--VSRLKHEHFVELL--GYCMESNNR---ILVYQFATMGSLHDVLHGRKGVQGAEPG 168
++ V ++H++ + + ++ R +LV ++ GSL L
Sbjct: 56 KNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS------- 108
Query: 169 PVLTWNQRVKVAYGAAKGLEFLHEKV------QPPIVHRDVRSSNVLLFDDFKSKIADFN 222
W ++A+ +GL +LH ++ +P I HRD+ S NVL+ +D I+DF
Sbjct: 109 ---DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165
Query: 223 LTNQ----------SSDTAARLHSTRVLGTFGYHAPEYAMTGQIT--------QKSDVYS 264
L+ + D AA +GT Y APE + G + ++ D+Y+
Sbjct: 166 LSMRLTGNRLVRPGEEDNAA----ISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYA 220
Query: 265 FGVVLLELL 273
G++ E+
Sbjct: 221 LGLIYWEIF 229
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 86/221 (38%), Gaps = 18/221 (8%)
Query: 67 TSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSA-------PEPESDFAAQLSV 118
TS + A IG G+YG V+ A+ G A+K + + P A L
Sbjct: 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRR 67
Query: 119 VSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVK 178
+ +H + V L+ C S + V + P P L
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTD---REIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD 124
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR 238
+ +GL+FLH IVHRD++ N+L+ K+ADF L S A T
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA---LTP 178
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
V+ T Y APE + D++S G + E+ RKP+
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 24/220 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTP--AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
IG GS+ V+ T+ T A + D F + + L+H + V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD- 92
Query: 134 CMESNNR-----ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
ES + +LV + T G+L L K + + + +W +++ KGL+
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYL---KRFKVXKIKVLRSWCRQI------LKGLQ 143
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
FLH + PPI+HRD++ N+ + S KI D L + A+ V+GT + A
Sbjct: 144 FLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA----VIGTPEFXA 198
Query: 248 PEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQ 287
PE + + DVY+FG LE T P Q
Sbjct: 199 PE-XYEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQ 237
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 21/230 (9%)
Query: 53 IEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTP-AAIKKLDTSSAPEPESD 111
+E P+ K E R +F + ++G G++ V A+ AIK + + E
Sbjct: 5 VEGPRWKQAEDIRDIYDF--RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS 62
Query: 112 FAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL 171
+++V+ ++KH + V L + L+ Q + G L D + E G
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI--------VEKG-FY 113
Query: 172 TWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSS 228
T ++ + +++LH+ IVHRD++ N+L + +D K I+DF L+ +
Sbjct: 114 TERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KME 169
Query: 229 DTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
D + L + GT GY APE ++ D +S GV+ LL G P
Sbjct: 170 DPGSVLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 70 FGTKALIGEGSYGRVF--YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
+ + IGEG+YG V Y L + AIKK+ ++ ++ R +HE+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 128 VELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
+ + +E + + Q L+ +L + L+ + Y
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQI 137
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGT 242
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 138 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 243 FGYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGS-----LHDVLHGRKGVQGAEPGPVLTWNQRVK 178
H F+ L Y E+ + + G +++V G Q EP + Q V
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ--EPRAIFYTAQIVS 300
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR 238
GLE LH++ I++RD++ NVLL DD +I+D L + A + +
Sbjct: 301 -------GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKG 348
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
GT G+ APE + + D ++ GV L E++ R P
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGS-----LHDVLHGRKGVQGAEPGPVLTWNQRVK 178
H F+ L Y E+ + + G +++V G Q EP + Q V
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ--EPRAIFYTAQIVS 300
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR 238
GLE LH++ I++RD++ NVLL DD +I+D L + A + +
Sbjct: 301 -------GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKG 348
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
GT G+ APE + + D ++ GV L E++ R P
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 24/253 (9%)
Query: 70 FGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+ + IGEG+YG V A + AIKK+ ++ ++ R +HE+ +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 129 ELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ +E + + Q L+ +L + L+ + Y
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQIL 134
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTF 243
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 244 GYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGRK--PVDHTMPKGQQSLVTWATPRLSE 300
Y APE + + T+ D++S G +L E+L+ R P H + + L +P S+
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP--SQ 249
Query: 301 DKVKQCVDPKLNN 313
+ + ++ K N
Sbjct: 250 EDLNXIINLKARN 262
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 89/169 (52%), Gaps = 20/169 (11%)
Query: 115 QLSVVSRLKHEHFVELLGYCMESN--NRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLT 172
+++++ +L H + V+L+ + N + +V++ G + +V +P L+
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-------PTLKP---LS 135
Query: 173 WNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAA 232
+Q KG+E+LH + I+HRD++ SN+L+ +D KIADF ++N+ + A
Sbjct: 136 EDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 233 RLHSTRVLGTFGYHAPE-YAMTGQIT--QKSDVYSFGVVLLELLTGRKP 278
L +T +GT + APE + T +I + DV++ GV L + G+ P
Sbjct: 193 LLSNT--VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 21/230 (9%)
Query: 53 IEIPQIKLDELNRLTSNFGTKALIGEGSYGRVFYAKLTDGTP-AAIKKLDTSSAPEPESD 111
+E P+ K E R +F + ++G G++ V A+ AIK + + E
Sbjct: 5 VEGPRWKQAEDIRDIYDF--RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS 62
Query: 112 FAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVL 171
+++V+ ++KH + V L + L+ Q + G L D + E G
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI--------VEKG-FY 113
Query: 172 TWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSS 228
T ++ + +++LH+ IVHRD++ N+L + +D K I+DF L+ +
Sbjct: 114 TERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KME 169
Query: 229 DTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
D + L + GT GY APE ++ D +S GV+ LL G P
Sbjct: 170 DPGSVLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGS-----LHDVLHGRKGVQGAEPGPVLTWNQRVK 178
H F+ L Y E+ + + G +++V G Q EP + Q V
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ--EPRAIFYTAQIVS 300
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR 238
GLE LH++ I++RD++ NVLL DD +I+D L + A + +
Sbjct: 301 -------GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKG 348
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
GT G+ APE + + D ++ GV L E++ R P
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 20/214 (9%)
Query: 70 FGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+ + IGEG+YG V A + AIKK+ ++ ++ R +HE+ +
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 129 ELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ +E + + Q L+ +L + L+ + Y
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQIL 136
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTF 243
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 137 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 244 GYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 20/214 (9%)
Query: 70 FGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+ + IGEG+YG V A + AIKK+ ++ ++ R +HE+ +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 129 ELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ +E + + Q L+ +L + L+ + Y
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQIL 134
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTF 243
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 244 GYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGS-----LHDVLHGRKGVQGAEPGPVLTWNQRVK 178
H F+ L Y E+ + + G +++V G Q EP + Q V
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ--EPRAIFYTAQIVS 300
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR 238
GLE LH++ I++RD++ NVLL DD +I+D L + A + +
Sbjct: 301 -------GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKG 348
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPV 279
GT G+ APE + + D ++ GV L E++ R P
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 20/214 (9%)
Query: 70 FGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+ + IGEG+YG V A + AIKK+ ++ ++ R +HE+ +
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 129 ELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ +E + + Q L+ +L + L+ + Y
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQIL 154
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTF 243
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 244 GYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 32/212 (15%)
Query: 76 IGEGSYGRV---FYAKLTDGTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G G+YG V + A+L A+KKL S + +L ++ LKHE+ + L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKV--AVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 92
Query: 131 L-----GYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAK 185
L +E + + + L++++ + L+ + Y +
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQ----------ALSDEHVQFLVYQLLR 142
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
GL+++H I+HRD++ SNV + +D + +I DF L Q+ + T + T Y
Sbjct: 143 GLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEM-----TGYVATRWY 194
Query: 246 HAPEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
APE + Q D++S G ++ ELL G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 20/214 (9%)
Query: 70 FGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+ + IGEG+YG V A + AIKK+ ++ ++ R +HE+ +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 129 ELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ +E + + Q L+ +L + L+ + Y
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQIL 134
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTF 243
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 244 GYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 36/214 (16%)
Query: 76 IGEGSYGRV---FYAKLTDGTPAAIKKLDT--SSAPEPESDFAAQLSVVSRLKHEHFVEL 130
+G G+YG V + A+L A+KKL S + +L ++ LKHE+ + L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKV--AVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 92
Query: 131 LGYCMESNNRILVYQFATMGSLHDV--LHGRKGVQGAEPGPVLTW----NQRVK-VAYGA 183
L F S+ D ++ + GA+ ++ ++ V+ + Y
Sbjct: 93 LDV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL 140
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
+GL+++H I+HRD++ SNV + +D + +I DF L Q+ + T + T
Sbjct: 141 LRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEM-----TGYVATR 192
Query: 244 GYHAPEYAMTG-QITQKSDVYSFGVVLLELLTGR 276
Y APE + Q D++S G ++ ELL G+
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 20/214 (9%)
Query: 70 FGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+ + IGEG+YG V A + AIKK+ ++ ++ R +HE+ +
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 129 ELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ +E + + Q L+ +L + L+ + Y
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQIL 142
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTF 243
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 143 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 244 GYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 20/214 (9%)
Query: 70 FGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+ + IGEG+YG V A + AIKK+ ++ ++ R +HE+ +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 129 ELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ +E + + Q L+ +L + L+ + Y
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQIL 134
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTF 243
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 244 GYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 20/214 (9%)
Query: 70 FGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+ + IGEG+YG V A + AIKK+ ++ ++ R +HE+ +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 129 ELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ +E + + Q L+ +L + L+ + Y
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH----------LSNDHICYFLYQIL 138
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTF 243
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 139 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 244 GYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 34/230 (14%)
Query: 67 TSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPESDFAA-QLSVVSRLKH 124
S + A IG+G++G VF A+ G A+KK+ + E A ++ ++ LKH
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 125 EHFVELLGYCMESN---NRI-----LVYQFA---TMGSLHDVLHGRKGVQGAEPGPVLTW 173
E+ V L+ C NR LV+ F G L +VL T
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK------------FTL 124
Query: 174 NQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS---DT 230
++ +V GL ++H I+HRD++++NVL+ D K+ADF L S ++
Sbjct: 125 SEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 181
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGRKPV 279
+ RV+ T Y PE + + D++ G ++ E+ T R P+
Sbjct: 182 QPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 27/236 (11%)
Query: 69 NFGTKALIGEGSYGRVFYAKLTDGTPA-------AIKKLDTSSAPEPESDFAAQLSVVSR 121
NF ++G G+YG+VF + G +KK + + V+
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 122 LKHEHFVELLGYCMESNNRI-LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVA 180
++ F+ L Y ++ ++ L+ + G L L R+ E V++
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHE----------VQIY 164
Query: 181 YG-AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQ-SSDTAARLHSTR 238
G LE LH + I++RD++ N+LL + + DF L+ + +D R +
Sbjct: 165 VGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD-- 219
Query: 239 VLGTFGYHAPEYAMTGQITQKS--DVYSFGVVLLELLTGRKPVDHTMPKGQQSLVT 292
GT Y AP+ G D +S GV++ ELLTG P K Q+ ++
Sbjct: 220 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS 275
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 70 FGTKALIGEGSYGRVF--YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
+ + IGEG+YG V Y L + AIKK+ ++ ++ R +HE+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 128 VELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
+ + +E + + Q L+ +L + L+ + Y
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQI 138
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGT 242
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 139 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 195
Query: 243 FGYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 20/214 (9%)
Query: 70 FGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+ + IGEG+YG V A + AIKK+ ++ ++ R +HE+ +
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 129 ELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ +E + + Q L+ +L + L+ + Y
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQIL 132
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTF 243
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 133 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 244 GYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 178 KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHST 237
K+A K LE LH K+ ++HRDV+ SNVL+ + K DF ++ D A+
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 238 RVLGTFGYHAPEYAMTGQITQ-----KSDVYSFGVVLLELLTGRKPVDHTMPKGQQ--SL 290
G Y APE + ++ Q KSD++S G+ +EL R P D QQ +
Sbjct: 198 ---GCKPYXAPE-RINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQV 253
Query: 291 VTWATPRLSEDK 302
V +P+L DK
Sbjct: 254 VEEPSPQLPADK 265
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 70 FGTKALIGEGSYGRVF--YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
+ + IGEG+YG V Y L + AIKK+ ++ ++ R +HE+
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 128 VELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
+ + +E + + Q L+ +L + L+ + Y
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQI 139
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGT 242
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 140 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 196
Query: 243 FGYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 70 FGTKALIGEGSYGRVF--YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
+ + IGEG+YG V Y L + AIKK+ ++ ++ R +HE+
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 128 VELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
+ + +E + + Q L+ +L + L+ + Y
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQI 130
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGT 242
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 131 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 187
Query: 243 FGYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 70 FGTKALIGEGSYGRVF--YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
+ + IGEG+YG V Y L + AIKK+ ++ ++ R +HE+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 128 VELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
+ + +E + + Q L+ +L + L+ + Y
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQI 137
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGT 242
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 138 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 243 FGYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 115/271 (42%), Gaps = 46/271 (16%)
Query: 65 RLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLK 123
R S+F A++G+G++G+V A+ D AIKK+ E S +++ +++ L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI--RHTEEKLSTILSEVXLLASLN 60
Query: 124 HEHFVELLGYCMESNNRI-------------LVYQFATMGSLHDVLHGRKGVQGAEPGPV 170
H++ V +E N + + ++ +L+D++H Q +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE--- 117
Query: 171 LTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTN--QSS 228
W ++ + L ++H + I+HR+++ N+ + + KI DF L S
Sbjct: 118 -YW----RLFRQILEALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 229 DTAARLHS----------TRVLGTFGYHAPEYAM-TGQITQKSDVYSFGVVLLELL---- 273
+L S T +GT Y A E TG +K D YS G++ E +
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFS 229
Query: 274 TGRKPVDHTMPKGQQSLVTWATPRLSEDKVK 304
TG + V+ + K +S+ P ++K K
Sbjct: 230 TGXERVN--ILKKLRSVSIEFPPDFDDNKXK 258
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 24/253 (9%)
Query: 70 FGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+ + IGEG+YG V A + AIKK+ ++ ++ R +HE+ +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 129 ELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ +E + + Q L+ +L + L+ + Y
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQIL 134
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTF 243
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 244 GYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGRK--PVDHTMPKGQQSLVTWATPRLSE 300
Y APE + + T+ D++S G +L E+L+ R P H + + L +P S+
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP--SQ 249
Query: 301 DKVKQCVDPKLNN 313
+ + ++ K N
Sbjct: 250 EDLNXIINLKARN 262
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 34/230 (14%)
Query: 67 TSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPESDFAA-QLSVVSRLKH 124
S + A IG+G++G VF A+ G A+KK+ + E A ++ ++ LKH
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 125 EHFVELLGYCMESN---NRI-----LVYQFA---TMGSLHDVLHGRKGVQGAEPGPVLTW 173
E+ V L+ C NR LV+ F G L +VL T
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK------------FTL 124
Query: 174 NQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS---DT 230
++ +V GL ++H I+HRD++++NVL+ D K+ADF L S ++
Sbjct: 125 SEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 181
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGRKPV 279
+ RV+ T Y PE + + D++ G ++ E+ T R P+
Sbjct: 182 QPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 20/214 (9%)
Query: 70 FGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+ + IGEG+YG V A + AIKK+ ++ ++ R +HE+ +
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 129 ELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ +E + + Q L+ +L + L+ + Y
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQIL 132
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTF 243
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 133 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 244 GYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 70 FGTKALIGEGSYGRVF--YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
+ + IGEG+YG V Y L + AIKK+ ++ ++ R +HE+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 128 VELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
+ + +E + + Q L+ +L + L+ + Y
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQI 137
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGT 242
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 138 LRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 243 FGYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 34/230 (14%)
Query: 67 TSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPESDFAA-QLSVVSRLKH 124
S + A IG+G++G VF A+ G A+KK+ + E A ++ ++ LKH
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 125 EHFVELLGYCMESN---NRI-----LVYQFA---TMGSLHDVLHGRKGVQGAEPGPVLTW 173
E+ V L+ C NR LV+ F G L +VL T
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK------------FTL 124
Query: 174 NQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS---DT 230
++ +V GL ++H I+HRD++++NVL+ D K+ADF L S ++
Sbjct: 125 SEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 181
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGRKPV 279
+ RV+ T Y PE + + D++ G ++ E+ T R P+
Sbjct: 182 QPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 34/216 (15%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDF-AAQLSVVSRLKHEHFVELLGYC 134
IG+G YG V+ K G A+K T+ E S F ++ ++HE+ + +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAAD 100
Query: 135 MESNNR----ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFL 190
++ L+ + GSL+D L L +K+AY + GL L
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYL----------KSTTLDAKSMLKLAYSSVSGLCHL 150
Query: 191 HEKV-----QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH---STRVLGT 242
H ++ +P I HRD++S N+L+ + IAD L + + +TRV GT
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GT 209
Query: 243 FGYHAPEYAMTG------QITQKSDVYSFGVVLLEL 272
Y PE Q +D+YSFG++L E+
Sbjct: 210 KRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 34/230 (14%)
Query: 67 TSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPESDFAA-QLSVVSRLKH 124
S + A IG+G++G VF A+ G A+KK+ + E A ++ ++ LKH
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 125 EHFVELLGYCMESN---NRI-----LVYQFA---TMGSLHDVLHGRKGVQGAEPGPVLTW 173
E+ V L+ C NR LV+ F G L +VL T
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK------------FTL 123
Query: 174 NQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS---DT 230
++ +V GL ++H I+HRD++++NVL+ D K+ADF L S ++
Sbjct: 124 SEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 180
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGRKPV 279
+ RV+ T Y PE + + D++ G ++ E+ T R P+
Sbjct: 181 QPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 228
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 38/228 (16%)
Query: 76 IGEGSYGRVFYA-KLTDGTPAAIKKLDTS--SAPEPESDFAAQLSVVSRLKHEHFVELLG 132
+G+G+YG V+ + G A+KK+ + ++ + + F + + HE+ V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 133 YCMESNNRILVYQFATMGS-LHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
N+R + F M + LH V+ +L + V Y K +++LH
Sbjct: 77 VLRADNDRDVYLVFDYMETDLHAVIRAN----------ILEPVHKQYVVYQLIKVIKYLH 126
Query: 192 EKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS--------------- 236
++HRD++ SN+LL + K+ADF L+ + ++
Sbjct: 127 ---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 237 ----TRVLGTFGYHAPEYAM-TGQITQKSDVYSFGVVLLELLTGRKPV 279
T + T Y APE + + + T+ D++S G +L E+L G KP+
Sbjct: 184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 70 FGTKALIGEGSYGRVF--YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
+ + IGEG+YG V Y L + AI+K+ ++ ++ R +HE+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL-NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 128 VELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
+ + +E + + Q L+ +L + L+ + Y
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQI 137
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGT 242
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 138 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 243 FGYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 75 LIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
++GEG +G V+ T + A+K + + F ++ ++ L H H V+L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 131 LGYCMESNNRIL--VYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
+G E I+ +Y + +G H + + ++ VLT V + K +
Sbjct: 91 IGIIEEEPTWIIMELYPYGELG--HYLERNKNSLK------VLT---LVLYSLQICKAMA 139
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+L E + VHRD+ N+L+ K+ DF L+ D S L + +P
Sbjct: 140 YL-ESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSP 195
Query: 249 EYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
E + T SDV+ F V + E+L+ G++P
Sbjct: 196 ESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 75 LIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
++GEG +G V+ T + A+K + + F ++ ++ L H H V+L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 131 LGYCMESNNRIL--VYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
+G E I+ +Y + +G H + + ++ VLT V + K +
Sbjct: 79 IGIIEEEPTWIIMELYPYGELG--HYLERNKNSLK------VLT---LVLYSLQICKAMA 127
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+L E + VHRD+ N+L+ K+ DF L+ D S L + +P
Sbjct: 128 YL-ESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSP 183
Query: 249 EYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
E + T SDV+ F V + E+L+ G++P
Sbjct: 184 ESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 75 LIGEGSYGRVFYAKLT----DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVEL 130
++GEG +G V+ T + A+K + + F ++ ++ L H H V+L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 131 LGYCMESNNRIL--VYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
+G E I+ +Y + +G H + + ++ VLT V + K +
Sbjct: 75 IGIIEEEPTWIIMELYPYGELG--HYLERNKNSLK------VLT---LVLYSLQICKAMA 123
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+L E + VHRD+ N+L+ K+ DF L+ D S L + +P
Sbjct: 124 YL-ESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSP 179
Query: 249 EYAMTGQITQKSDVYSFGVVLLELLT-GRKP 278
E + T SDV+ F V + E+L+ G++P
Sbjct: 180 ESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 111/241 (46%), Gaps = 15/241 (6%)
Query: 76 IGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
+G G G VF A D AIKK+ + P+ ++ ++ RL H++ V++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKI-VLTDPQSVKHALREIKIIRRLDHDNIVKVFEIL 77
Query: 135 MESNNRILVYQFATMGSLHDVLHGRKGVQG-----AEPGPVLTWNQRVKVAYGAAKGLEF 189
S ++ L ++ L+ V ++ ++ E GP+L + R+ Y +GL++
Sbjct: 78 GPSGSQ-LTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL-FMYQLLRGLKY 135
Query: 190 LHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTN-QSSDTAARLHSTRVLGTFGYHA 247
+H ++HRD++ +N+ + +D KI DF L + + H + L T Y +
Sbjct: 136 IH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRS 192
Query: 248 PEYAMT-GQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQC 306
P ++ T+ D+++ G + E+LTG+ Q L+ + P + E+ ++
Sbjct: 193 PRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQEL 252
Query: 307 V 307
+
Sbjct: 253 L 253
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 171 LTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDT 230
LT + ++ AKG+EFL + +HRD+ + N+LL + KI DF L
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ + APE T +SDV+SFGV+L E+ +
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 90/212 (42%), Gaps = 18/212 (8%)
Query: 75 LIGEGSYGRVFYA-KLTDGTPAAIKKLD----TSSAPEPESDFAAQLSVVSRLKHEHFVE 129
+IG+G++ V G A+K +D TSS D + S+ LKH H VE
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LL +V++F L + V+ A+ G V + + L +
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADL-----CFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKS---KIADFNLTNQSSDTAARLHSTRVLGTFGYH 246
H+ I+HRDV+ NVLL S K+ DF + Q ++ L + +GT +
Sbjct: 146 CHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG--LVAGGRVGTPHFM 200
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
APE + DV+ GV+L LL+G P
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 171 LTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDT 230
LT + ++ AKG+EFL + +HRD+ + N+LL + KI DF L
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ + APE T +SDV+SFGV+L E+ +
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 171 LTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDT 230
LT + ++ AKG+EFL + +HRD+ + N+LL + KI DF L
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ + APE T +SDV+SFGV+L E+ +
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 171 LTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDT 230
+T + ++ A+G+EFL + +HRD+ + N+LL ++ KI DF L
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKN 252
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ + APE + KSDV+S+GV+L E+ +
Sbjct: 253 PDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 83/208 (39%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPE---SDFAAQLSVVSRLKHEHFVELLG 132
+G+G +G V+ A+ K+ S E E ++ + + L H + + L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y + L+ ++A G L+ L + + + A L + H
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKEL---------QKSCTFDEQRTATIMEELADALMYCHG 141
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
K ++HRD++ N+LL + KIADF S A L + GT Y PE
Sbjct: 142 K---KVIHRDIKPENLLLGLKGELKIADFGW----SVHAPSLRRKTMCGTLDYLPPEMIE 194
Query: 253 TGQITQKSDVYSFGVVLLELLTGRKPVD 280
+K D++ GV+ ELL G P +
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 171 LTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDT 230
LT + ++ AKG+EFL + +HRD+ + N+LL + KI DF L
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLT 274
+ + APE T +SDV+SFGV+L E+ +
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 21/164 (12%)
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H H + L+ S+ LV+ G L D L + + E ++
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMR---------SL 209
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTF 243
+ + FLH IVHRD++ N+LL D+ + +++DF + + +L + GT
Sbjct: 210 LEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCH-LEPGEKLRE--LCGTP 263
Query: 244 GYHAPEYAMTGQ------ITQKSDVYSFGVVLLELLTGRKPVDH 281
GY APE ++ D+++ GV+L LL G P H
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 20/214 (9%)
Query: 70 FGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+ + IGEG+YG V A + AIKK+ ++ ++ R +HE+ +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 129 ELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ +E + + Q L+ +L + L+ + Y
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQIL 138
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTF 243
+GL+++H ++HRD++ SN+LL KI DF L + D + T
Sbjct: 139 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 244 GYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 20/214 (9%)
Query: 70 FGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+ + IGEG+YG V A + AIKK+ ++ ++ R +HE+ +
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 129 ELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ +E + + Q L+ +L + L+ + Y
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQIL 139
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTF 243
+GL+++H ++HRD++ SN+LL KI DF L + D + T
Sbjct: 140 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 244 GYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 20/214 (9%)
Query: 70 FGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+ + IGEG+YG V A + AIKK+ ++ ++ +HE+ +
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 129 ELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ +E + + Q L+ +L + L+ + Y
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQIL 136
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTF 243
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 244 GYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 22/156 (14%)
Query: 131 LGYCMESNNRILVY---QFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+G S+ ++ +Y Q +L D ++ R ++ E G L + A+ +
Sbjct: 124 VGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCL------HIFIQIAEAV 177
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTN--------QSSDTAARLHSTRV 239
EFLH K ++HRD++ SN+ D K+ DF L Q+ T ++T
Sbjct: 178 EFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHX 234
Query: 240 --LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELL 273
+GT Y +PE + K D++S G++L ELL
Sbjct: 235 GQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 69 NFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPES-DFAAQLSVVSRLKHEHF 127
NF TK + E G ++ + G +K L +S DF + + H +
Sbjct: 13 NFLTK--LNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 128 VELLGYCME--SNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAK 185
+ +LG C + + L+ + GSL++VLH V+ +Q VK A A+
Sbjct: 70 LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF-------VVDQSQAVKFALDMAR 122
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKI--ADFNLTNQSSDTAARLHSTRVLGTF 243
G+ FLH ++P I + S +V++ +D ++I AD + QS R+++
Sbjct: 123 GMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS---PGRMYAP------ 172
Query: 244 GYHAPEYAMT---GQITQKSDVYSFGVVLLELLTGRKP 278
+ APE + +D++SF V+L EL+T P
Sbjct: 173 AWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVP 210
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 20/214 (9%)
Query: 70 FGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFV 128
+ + IGEG+YG V A + AIKK+ ++ ++ +HE+ +
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 129 ELLGYC----MESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
+ +E + + Q L+ +L + L+ + Y
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----------LSNDHICYFLYQIL 136
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTF 243
+GL+++H ++HRD++ SN+LL KI DF L + D T + T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 244 GYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGR 276
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAKL--TDGTPAA-IKKLDTSSAPEPESDFAAQLSVVSRLKHE 125
+F +IG GSY +V +L TD A + K + + E + V + +
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 126 HFVELLGYCMESNNRIL-VYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
F+ L C ++ +R+ V ++ G L + H ++ + E ++ + +A
Sbjct: 81 PFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARF-YSAEISLA---- 133
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQS---SDTAARLHSTRVLG 241
L +LHE+ I++RD++ NVLL + K+ D+ + + DT ++ G
Sbjct: 134 --LNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-----TSXFCG 183
Query: 242 TFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
T Y APE D ++ GV++ E++ GR P D
Sbjct: 184 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 75 LIGEGSYGRVFYAKLTDGTP-AAIKKLDTSSAPEPESDF----AAQLSVVSRLKHEHFVE 129
+GEG + V+ A+ + AIKK+ E + ++ ++ L H + +
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 130 LLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEF 189
LL +N LV+ F M + +V+ + VLT + +GLE+
Sbjct: 77 LLDAFGHKSNISLVFDF--METDLEVIIKDNSL-------VLTPSHIKAYMLMTLQGLEY 127
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPE 249
LH Q I+HRD++ +N+LL ++ K+ADF L +S + R + +V+ T Y APE
Sbjct: 128 LH---QHWILHRDLKPNNLLLDENGVLKLADFGLA-KSFGSPNRAYXHQVV-TRWYRAPE 182
Query: 250 YAMTGQITQKS-DVYSFGVVLLELL 273
++ D+++ G +L ELL
Sbjct: 183 LLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAKL--TDGTPAA-IKKLDTSSAPEPESDFAAQLSVVSRLKHE 125
+F +IG GSY +V +L TD A + K + + E + V + +
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 126 HFVELLGYCMESNNRIL-VYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
F+ L C ++ +R+ V ++ G L + H ++ + E ++ + +A
Sbjct: 70 PFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARF-YSAEISLA---- 122
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQS---SDTAARLHSTRVLG 241
L +LHE+ I++RD++ NVLL + K+ D+ + + DT ++ G
Sbjct: 123 --LNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-----TSXFCG 172
Query: 242 TFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
T Y APE D ++ GV++ E++ GR P D
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAKL--TDGTPAA-IKKLDTSSAPEPESDFAAQLSVVSRLKHE 125
+F +IG GSY +V +L TD A + K + + E + V + +
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH 112
Query: 126 HFVELLGYCMESNNRIL-VYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
F+ L C ++ +R+ V ++ G L + H ++ + E ++ + +A
Sbjct: 113 PFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARF-YSAEISLA---- 165
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQS---SDTAARLHSTRVLG 241
L +LHE+ I++RD++ NVLL + K+ D+ + + DT ++ G
Sbjct: 166 --LNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-----TSTFCG 215
Query: 242 TFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
T Y APE D ++ GV++ E++ GR P D
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAKL--TDGTPAA-IKKLDTSSAPEPESDFAAQLSVVSRLKHE 125
+F +IG GSY +V +L TD A + K + + E + V + +
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 126 HFVELLGYCMESNNRIL-VYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
F+ L C ++ +R+ V ++ G L + H ++ + E ++ + +A
Sbjct: 66 PFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARF-YSAEISLA---- 118
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQS---SDTAARLHSTRVLG 241
L +LHE+ I++RD++ NVLL + K+ D+ + + DT ++ G
Sbjct: 119 --LNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-----TSXFCG 168
Query: 242 TFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVD 280
T Y APE D ++ GV++ E++ GR P D
Sbjct: 169 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 89/219 (40%), Gaps = 21/219 (9%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSS-APEPESDFAAQLSVVSRLK 123
+T + IG+G++ V KL G A K ++T + + + LK
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + V L E LV+ T G L + + R+ A+ + Q++
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI---QQI------ 112
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS---KIADFNLTNQ-SSDTAARLHSTRV 239
LE + Q +VHRD++ N+LL K K+ADF L + D A
Sbjct: 113 ---LEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA-- 167
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
GT GY +PE + D+++ GV+L LL G P
Sbjct: 168 -GTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCM 135
+G G+YG V+ AK DG L +++++ LKH + + L +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 136 ESNNR--ILVYQFATMGSLHDVLHGRKGVQG--AEPGPVLTWNQRVK-VAYGAAKGLEFL 190
+R L++ +A HD+ H K + A PV VK + Y G+ +L
Sbjct: 89 SHADRKVWLLFDYAE----HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL 144
Query: 191 HEKVQPPIVHRDVRSSNVLLF----DDFKSKIADF---NLTNQSSDTAARLHSTRVLGTF 243
H ++HRD++ +N+L+ + + KIAD L N A L V+ TF
Sbjct: 145 HANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDP--VVVTF 199
Query: 244 GYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLTGRKPVDH 281
Y APE + + T+ D+++ G + ELLT +P+ H
Sbjct: 200 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTS-EPIFH 237
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 21/217 (9%)
Query: 68 SNFGTKALIGEGSYGRVFYAKLTDGTPA-AIKKLDTSSAPEPES--DFAAQLSVVSRLKH 124
+F IG+GS+G+V + D A+K ++ E + +L ++ L+H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 125 EHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA 184
V L + + +V G L H ++ V E L + V
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLR--YHLQQNVHFKEETVKLFICELVM------ 126
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
L++L + I+HRD++ N+LL + I DFN+ ++ T + GT
Sbjct: 127 -ALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNI---AAMLPRETQITTMAGTKP 179
Query: 245 YHAPEYAMTGQITQKS---DVYSFGVVLLELLTGRKP 278
Y APE + + S D +S GV ELL GR+P
Sbjct: 180 YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 200 HRDVRSSNVLLFDDFKSKIADFNLTNQSSDTA-ARLHSTRVLGTFGYHAPEYAMTGQITQ 258
HRDV+ N+L+ D + + DF + + ++D +L +T +GT Y APE T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT--VGTLYYXAPERFSESHATY 214
Query: 259 KSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLS 299
++D+Y+ VL E LTG P + + A PR S
Sbjct: 215 RADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPS 255
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 75 LIGEGSYGRVFYAKLT-DGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
++G G +G+V + T G A K + T + E + ++SV+++L H + ++L
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKE-EVKNEISVMNQLDHANLIQLYDA 154
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
N+ +LV ++ G L D + + E +L Q +G+ +H
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRIID-ESYNLTELDTILFMKQ-------ICEGIRHMH-- 204
Query: 194 VQPPIVHRDVRSSNVLLF--DDFKSKIADFNLTNQSSDTAARLHSTRV-----LGTFGYH 246
Q I+H D++ N+L D + KI DF L AR + R GT +
Sbjct: 205 -QMYILHLDLKPENILCVNRDAKQIKIIDFGL--------ARRYKPREKLKVNFGTPEFL 255
Query: 247 APEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
APE ++ +D++S GV+ LL+G P
Sbjct: 256 APEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 37/247 (14%)
Query: 40 NVVKTGTPQKALPIEIPQIKL----DELNRLTSN-FGTKALIGEGSYGRVFYAKLTDGTP 94
++ K PQ P+E+ Q + D L L S FG E + GRVF AK + TP
Sbjct: 32 DIWKKYVPQ---PVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFIN-TP 87
Query: 95 AAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHD 154
+ K + ++S++++L H + L + +L+ +F + G L D
Sbjct: 88 YPLDKYTVKN----------EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFD 137
Query: 155 VLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF 214
+ A ++ + + A +GL+ +HE IVH D++ N++
Sbjct: 138 RI--------AAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKK 186
Query: 215 KS--KIADFNL-TNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLE 271
S KI DF L T + D ++ + T + APE + +D+++ GV+
Sbjct: 187 ASSVKIIDFGLATKLNPDEIVKVTT----ATAEFAAPEIVDREPVGFYTDMWAIGVLGYV 242
Query: 272 LLTGRKP 278
LL+G P
Sbjct: 243 LLSGLSP 249
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 92/214 (42%), Gaps = 32/214 (14%)
Query: 75 LIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+IG GS+G V+ AKL D G AIKK+ A + +L ++ +L H + V L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-----ELQIMRKLDHCNIVRLRYF 81
Query: 134 CMESN--------NRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKV-AYGAA 184
S N +L Y AT+ + R + + PV+ VK+ Y
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYRV-----ARHYSRAKQTLPVIY----VKLYMYQLF 132
Query: 185 KGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGTF 243
+ L ++H I HRD++ N+LL D K+ DF Q + + +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSR 186
Query: 244 GYHAPEYAM-TGQITQKSDVYSFGVVLLELLTGR 276
Y APE T DV+S G VL ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
GLE LH + IV+RD++ N+LL D +I+D L + + RV GT GY
Sbjct: 298 GLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPE--GQTIKGRV-GTVGY 351
Query: 246 HAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPK 285
APE + T D ++ G +L E++ G+ P K
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 103/248 (41%), Gaps = 53/248 (21%)
Query: 65 RLTSNFGTKALIGEGSYGRVFYA--KLTDG--TPAAIKKLDTSSAPEPESDFAAQLSVVS 120
+L++ F + IGEG++ V+ A +L G A+K L +S P AA+L ++
Sbjct: 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHP---IRIAAELQCLT 74
Query: 121 RLKHEHFVELLGYCMESNNRILVYQ-FATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKV 179
+ V + YC N+ +++ + S D+L+ L++ + +
Sbjct: 75 VAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS------------LSFQEVREY 122
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARL---- 234
K L+ +H Q IVHRDV+ SN L K + DF L + DT L
Sbjct: 123 MLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFV 179
Query: 235 ----HSTRV------------------LGTFGYHAPEYAMTGQITQKS--DVYSFGVVLL 270
R GT G+ APE +T Q + D++S GV+ L
Sbjct: 180 QSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPE-VLTKCPNQTTAIDMWSAGVIFL 238
Query: 271 ELLTGRKP 278
LL+GR P
Sbjct: 239 SLLSGRYP 246
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 76 IGEGSYGRV---FYAKLTDGTPAAI---KKLDTSSAPE--PESDFAAQLSVVSRLKHEHF 127
+G G+ G V F K I +K SA E P + ++ ++ +L H
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 128 VELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+++ + ++ + +V + G L D + G K ++ A Y +
Sbjct: 77 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---------YQMLLAV 126
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
++LHE I+HRD++ NVLL +D KI DF + +T+ L T + GT
Sbjct: 127 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGTPT 180
Query: 245 YHAPEYAM---TGQITQKSDVYSFGVVLLELLTGRKP 278
Y APE + T + D +S GV+L L+G P
Sbjct: 181 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 76 IGEGSYGRV---FYAKLTDGTPAAI---KKLDTSSAPE--PESDFAAQLSVVSRLKHEHF 127
+G G+ G V F K I +K SA E P + ++ ++ +L H
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 128 VELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+++ + ++ + +V + G L D + G K ++ A Y +
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---------YQMLLAV 127
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
++LHE I+HRD++ NVLL +D KI DF + +T+ L T + GT
Sbjct: 128 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGTPT 181
Query: 245 YHAPEYAM---TGQITQKSDVYSFGVVLLELLTGRKP 278
Y APE + T + D +S GV+L L+G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 76 IGEGSYGRV---FYAKLTDGTPAAI---KKLDTSSAPE--PESDFAAQLSVVSRLKHEHF 127
+G G+ G V F K I +K SA E P + ++ ++ +L H
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 128 VELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+++ + ++ + +V + G L D + G K ++ A Y +
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---------YQMLLAV 127
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
++LHE I+HRD++ NVLL +D KI DF + +T+ L T + GT
Sbjct: 128 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGTPT 181
Query: 245 YHAPEYAM---TGQITQKSDVYSFGVVLLELLTGRKP 278
Y APE + T + D +S GV+L L+G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGY 245
GLE LH + IV+RD++ N+LL D +I+D L + + RV GT GY
Sbjct: 298 GLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPE--GQTIKGRV-GTVGY 351
Query: 246 HAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPK 285
APE + T D ++ G +L E++ G+ P K
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 76 IGEGSYGRV---FYAKLTDGTPAAI---KKLDTSSAPE--PESDFAAQLSVVSRLKHEHF 127
+G G+ G V F K I +K SA E P + ++ ++ +L H
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 128 VELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+++ + ++ + +V + G L D + G K ++ A Y +
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---------YQMLLAV 127
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
++LHE I+HRD++ NVLL +D KI DF + +T+ L T + GT
Sbjct: 128 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGTPT 181
Query: 245 YHAPEYAM---TGQITQKSDVYSFGVVLLELLTGRKP 278
Y APE + T + D +S GV+L L+G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 83/201 (41%), Gaps = 30/201 (14%)
Query: 96 AIKKLDTS-----SAPEPESDFAAQLSVVSRLK----HEHFVELLGYCMESNNRILVYQF 146
A+K +D + SA E + A L V L+ H + ++L + LV+
Sbjct: 46 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 105
Query: 147 ATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSS 206
G L D L + + E ++ V A LH + IVHRD++
Sbjct: 106 MKKGELFDYLTEKVTLSEKETRKIMRALLEVICA---------LH---KLNIVHRDLKPE 153
Query: 207 NVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQ------ITQKS 260
N+LL DD K+ DF + Q D +L S V GT Y APE ++
Sbjct: 154 NILLDDDMNIKLTDFGFSCQ-LDPGEKLRS--VCGTPSYLAPEIIECSMNDNHPGYGKEV 210
Query: 261 DVYSFGVVLLELLTGRKPVDH 281
D++S GV++ LL G P H
Sbjct: 211 DMWSTGVIMYTLLAGSPPFWH 231
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 76 IGEGSYGRV---FYAKLTDGTPAAI---KKLDTSSAPE--PESDFAAQLSVVSRLKHEHF 127
+G G+ G V F K I +K SA E P + ++ ++ +L H
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 128 VELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+++ + ++ + +V + G L D + G K ++ A Y +
Sbjct: 84 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---------YQMLLAV 133
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
++LHE I+HRD++ NVLL +D KI DF + +T+ L T + GT
Sbjct: 134 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGTPT 187
Query: 245 YHAPEYAM---TGQITQKSDVYSFGVVLLELLTGRKP 278
Y APE + T + D +S GV+L L+G P
Sbjct: 188 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 94/226 (41%), Gaps = 23/226 (10%)
Query: 65 RLTSNFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSA------PEPESDFAAQLSV 118
+L + L+GEGSYG+V ++ D + + P E++ ++ +
Sbjct: 2 KLIGKYLMGDLLGEGSYGKV--KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQL 59
Query: 119 VSRLKHEHFVELLG--YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
+ RL+H++ ++L+ Y E +V ++ G + ++L + P Q
Sbjct: 60 LRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLD-------SVPEKRFPVCQA 111
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
GLE+LH + IVH+D++ N+LL KI+ + AA
Sbjct: 112 HGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTC 168
Query: 237 TRVLGTFGYHAPEYA--MTGQITQKSDVYSFGVVLLELLTGRKPVD 280
G+ + PE A + K D++S GV L + TG P +
Sbjct: 169 RTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 27/242 (11%)
Query: 40 NVVKTGTPQKALPIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVF-YAKLTDGTPAAIK 98
++ K PQ P+EI + + ++ +G G++G V + G A K
Sbjct: 138 DIWKQYYPQ---PVEIKH------DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAK 188
Query: 99 KLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHG 158
+ T + E+ ++ +S L+H V L + N +++Y+F + G L + +
Sbjct: 189 FVMTPHESDKET-VRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-- 245
Query: 159 RKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS-- 216
A+ ++ ++ V+ KGL +HE VH D++ N++ +
Sbjct: 246 ------ADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNEL 296
Query: 217 KIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGR 276
K+ DF LT + +T GT + APE A + +D++S GV+ LL+G
Sbjct: 297 KLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 353
Query: 277 KP 278
P
Sbjct: 354 SP 355
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 22/215 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
++ +IG GS+G V+ AKL D G AIKK+ A + +L ++ +L H +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-----NRELQIMRKLDHCNI 75
Query: 128 VELLGYCMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGA 183
V L + S + VY + + + ++ R + + PV+ VK+ Y
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY----VKLYMYQL 131
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGT 242
+ L ++H I HRD++ N+LL D K+ DF Q + + +
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICS 185
Query: 243 FGYHAPEYAM-TGQITQKSDVYSFGVVLLELLTGR 276
Y APE T DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 27/242 (11%)
Query: 40 NVVKTGTPQKALPIEIPQIKLDELNRLTSNFGTKALIGEGSYGRVF-YAKLTDGTPAAIK 98
++ K PQ P+EI + + ++ +G G++G V + G A K
Sbjct: 32 DIWKQYYPQ---PVEIKH------DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAK 82
Query: 99 KLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHG 158
+ T + E+ ++ +S L+H V L + N +++Y+F + G L + +
Sbjct: 83 FVMTPHESDKET-VRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-- 139
Query: 159 RKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS-- 216
A+ ++ ++ V+ KGL +HE VH D++ N++ +
Sbjct: 140 ------ADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNEL 190
Query: 217 KIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGR 276
K+ DF LT + +T GT + APE A + +D++S GV+ LL+G
Sbjct: 191 KLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 247
Query: 277 KP 278
P
Sbjct: 248 SP 249
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 22/215 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
++ +IG GS+G V+ AKL D G AIKK+ + +L ++ +L H +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNI 75
Query: 128 VELLGYCMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGA 183
V L + S + +VY + + + ++ R + + PV+ VK+ Y
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY----VKLYMYQL 131
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGT 242
+ L ++H I HRD++ N+LL D K+ DF Q + + +
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICS 185
Query: 243 FGYHAPEYAM-TGQITQKSDVYSFGVVLLELLTGR 276
Y APE T DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 101/234 (43%), Gaps = 32/234 (13%)
Query: 55 IPQIKLDELNR--LTSNFGTKALIGEGSYGRVFYAKLTDGT--PAAIKKLDTSSAPEPES 110
+P +D NR L+ F ++ +G G+ V+ K GT P A+K L + +
Sbjct: 38 VPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCK-QKGTQKPYALKVLKKTV---DKK 93
Query: 111 DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPV 170
++ V+ RL H + ++L LV + T G L D + E G
Sbjct: 94 IVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRI--------VEKG-- 143
Query: 171 LTWNQRVKVAYGAAKGLE---FLHEKVQPPIVHRDVRSSNVLLFD---DFKSKIADFNLT 224
+++R A + LE +LHE IVHRD++ N+L D KIADF L
Sbjct: 144 -YYSER-DAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGL- 197
Query: 225 NQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
S ++ V GT GY APE + D++S G++ LL G +P
Sbjct: 198 --SKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 76 IGEGSYGRV---FYAKLTDGTPAAI---KKLDTSSAPE--PESDFAAQLSVVSRLKHEHF 127
+G G+ G V F K I +K SA E P + ++ ++ +L H
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 128 VELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+++ + ++ + +V + G L D + G K ++ A Y +
Sbjct: 203 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---------YQMLLAV 252
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
++LHE I+HRD++ NVLL +D KI DF + +T+ L T + GT
Sbjct: 253 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGTPT 306
Query: 245 YHAPEYAM---TGQITQKSDVYSFGVVLLELLTGRKP 278
Y APE + T + D +S GV+L L+G P
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 22/215 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
++ +IG GS+G V+ AKL D G AIKK+ A + +L ++ +L H +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-----ELQIMRKLDHCNI 75
Query: 128 VELLGYCMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGA 183
V L + S + VY + + + ++ R + + PV+ VK+ Y
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY----VKLYMYQL 131
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGT 242
+ L ++H I HRD++ N+LL D K+ DF Q + + +
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICS 185
Query: 243 FGYHAPEYAM-TGQITQKSDVYSFGVVLLELLTGR 276
Y APE T DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 76 IGEGSYGRV---FYAKLTDGTPAAI---KKLDTSSAPE--PESDFAAQLSVVSRLKHEHF 127
+G G+ G V F K I +K SA E P + ++ ++ +L H
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 128 VELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGL 187
+++ + ++ + +V + G L D + G K ++ A Y +
Sbjct: 217 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---------YQMLLAV 266
Query: 188 EFLHEKVQPPIVHRDVRSSNVLLF---DDFKSKIADFNLTNQSSDTAARLHSTRVLGTFG 244
++LHE I+HRD++ NVLL +D KI DF + +T+ L T + GT
Sbjct: 267 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGTPT 320
Query: 245 YHAPEYAM---TGQITQKSDVYSFGVVLLELLTGRKP 278
Y APE + T + D +S GV+L L+G P
Sbjct: 321 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 82/201 (40%), Gaps = 30/201 (14%)
Query: 96 AIKKLDTS-----SAPEPESDFAAQLSVVSRLK----HEHFVELLGYCMESNNRILVYQF 146
A+K +D + SA E + A L V L+ H + ++L + LV+
Sbjct: 33 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 92
Query: 147 ATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSS 206
G L D L + + E ++ V A LH + IVHRD++
Sbjct: 93 MKKGELFDYLTEKVTLSEKETRKIMRALLEVICA---------LH---KLNIVHRDLKPE 140
Query: 207 NVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQ------ITQKS 260
N+LL DD K+ DF + Q D +L V GT Y APE ++
Sbjct: 141 NILLDDDMNIKLTDFGFSCQ-LDPGEKLRE--VCGTPSYLAPEIIECSMNDNHPGYGKEV 197
Query: 261 DVYSFGVVLLELLTGRKPVDH 281
D++S GV++ LL G P H
Sbjct: 198 DMWSTGVIMYTLLAGSPPFWH 218
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 94/239 (39%), Gaps = 38/239 (15%)
Query: 65 RLTSNFGTKALIGEGSYGRVF--YAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
++ + + LIG GSYG V Y KL A K L ++++++RL
Sbjct: 50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL 109
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVK-VAY 181
H+H V++L + + V +F + + ++ + PV +K + Y
Sbjct: 110 NHDHVVKVLDIVIPKD----VEKFDELYVVLEI--ADSDFKKLFRTPVYLTELHIKTLLY 163
Query: 182 GAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADF-------------------- 221
G++++H I+HRD++ +N L+ D K+ DF
Sbjct: 164 NLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISP 220
Query: 222 -----NLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQ-ITQKSDVYSFGVVLLELLT 274
NL + T + T Y APE + + T+ DV+S G + ELL
Sbjct: 221 REDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 18/204 (8%)
Query: 76 IGEGSYGRVFY--AKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+GEG+Y V+ +KLTD A+K++ ++S++ LKH + V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
+ LV+++ L L + G ++ + + +GL + H +
Sbjct: 69 IHTEKSLTLVFEYLD-KDLKQYLD--------DCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 194 VQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM- 252
++HRD++ N+L+ + + K+ADF L S + + V+ T Y P+ +
Sbjct: 120 ---KVLHRDLKPQNLLINERGELKLADFGLARAKS-IPTKTYDNEVV-TLWYRPPDILLG 174
Query: 253 TGQITQKSDVYSFGVVLLELLTGR 276
+ + + D++ G + E+ TGR
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 88/222 (39%), Gaps = 23/222 (10%)
Query: 64 NRLTSNFGTKALIGEGSYGRVFYAKLTDGTPA---AIKKLDTSS-APEPESDFAAQLSVV 119
R T ++ +G+G++ V + TP A K ++T + + +
Sbjct: 27 TRFTDDYQLFEELGKGAFSVV--RRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARIC 84
Query: 120 SRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKV 179
LKH + V L E LV+ T G L + + R+ A+
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD------------A 132
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS---KIADFNLTNQSSDTAARLHS 236
++ + LE ++ Q IVHRD++ N+LL K K+ADF L +
Sbjct: 133 SHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG 192
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
GT GY +PE + D+++ GV+L LL G P
Sbjct: 193 --FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 82/201 (40%), Gaps = 30/201 (14%)
Query: 96 AIKKLDTS-----SAPEPESDFAAQLSVVSRLK----HEHFVELLGYCMESNNRILVYQF 146
A+K +D + SA E + A L V L+ H + ++L + LV+
Sbjct: 46 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 105
Query: 147 ATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSS 206
G L D L + + E ++ V A LH + IVHRD++
Sbjct: 106 MKKGELFDYLTEKVTLSEKETRKIMRALLEVICA---------LH---KLNIVHRDLKPE 153
Query: 207 NVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQ------ITQKS 260
N+LL DD K+ DF + Q D +L V GT Y APE ++
Sbjct: 154 NILLDDDMNIKLTDFGFSCQ-LDPGEKLRE--VCGTPSYLAPEIIECSMNDNHPGYGKEV 210
Query: 261 DVYSFGVVLLELLTGRKPVDH 281
D++S GV++ LL G P H
Sbjct: 211 DMWSTGVIMYTLLAGSPPFWH 231
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
++ +IG GS+G V+ AKL D G AIKK+ + +L ++ +L H +
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNI 83
Query: 128 VELLGYCMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGA 183
V L + S + VY + + + ++ R + + PV+ VK+ Y
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY----VKLYMYQL 139
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGT 242
+ L ++H I HRD++ N+LL D K+ DF Q + + +
Sbjct: 140 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICS 193
Query: 243 FGYHAPEYAM-TGQITQKSDVYSFGVVLLELLTGR 276
Y APE T DV+S G VL ELL G+
Sbjct: 194 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
++ +IG GS+G V+ AKL D G AIKK+ + +L ++ +L H +
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNI 94
Query: 128 VELLGYCMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGA 183
V L + S + VY + + + ++ R + + PV+ VK+ Y
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY----VKLYMYQL 150
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGT 242
+ L ++H I HRD++ N+LL D K+ DF Q + + +
Sbjct: 151 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICS 204
Query: 243 FGYHAPEYAM-TGQITQKSDVYSFGVVLLELLTGR 276
Y APE T DV+S G VL ELL G+
Sbjct: 205 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
++ +IG GS+G V+ AKL D G AIKK+ + +L ++ +L H +
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNI 76
Query: 128 VELLGYCMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGA 183
V L + S + VY + + + ++ R + + PV+ VK+ Y
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY----VKLYMYQL 132
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGT 242
+ L ++H I HRD++ N+LL D K+ DF Q + + +
Sbjct: 133 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICS 186
Query: 243 FGYHAPEYAM-TGQITQKSDVYSFGVVLLELLTGR 276
Y APE T DV+S G VL ELL G+
Sbjct: 187 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
++ +IG GS+G V+ AKL D G AIKK+ + +L ++ +L H +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNI 75
Query: 128 VELLGYCMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGA 183
V L + S + VY + + + ++ R + + PV+ VK+ Y
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY----VKLYMYQL 131
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGT 242
+ L ++H I HRD++ N+LL D K+ DF Q + + +
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICS 185
Query: 243 FGYHAPEYAM-TGQITQKSDVYSFGVVLLELLTGR 276
Y APE T DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
++ +IG GS+G V+ AKL D G AIKK+ + +L ++ +L H +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNI 75
Query: 128 VELLGYCMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGA 183
V L + S + VY + + + ++ R + + PV+ VK+ Y
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY----VKLYMYQL 131
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGT 242
+ L ++H I HRD++ N+LL D K+ DF Q + + +
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICS 185
Query: 243 FGYHAPEYAM-TGQITQKSDVYSFGVVLLELLTGR 276
Y APE T DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
++ +IG GS+G V+ AKL D G AIKK+ + +L ++ +L H +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNI 75
Query: 128 VELLGYCMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGA 183
V L + S + VY + + + ++ R + + PV+ VK+ Y
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY----VKLYMYQL 131
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGT 242
+ L ++H I HRD++ N+LL D K+ DF Q + + +
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICS 185
Query: 243 FGYHAPEYAM-TGQITQKSDVYSFGVVLLELLTGR 276
Y APE T DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 75 LIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+IG GS+G V+ AKL D G AIKK+ + +L ++ +L H + V L +
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 93
Query: 134 CMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGAAKGLEF 189
S + VY + + + ++ R + + PV+ VK+ Y + L +
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY----VKLYMYQLFRSLAY 149
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+H I HRD++ N+LL D K+ DF Q + + + Y AP
Sbjct: 150 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSRYYRAP 203
Query: 249 EYAM-TGQITQKSDVYSFGVVLLELLTGR 276
E T DV+S G VL ELL G+
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 75 LIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+IG GS+G V+ AKL D G AIKK+ + +L ++ +L H + V L +
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 115
Query: 134 CMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGAAKGLEF 189
S + VY + + + ++ R + + PV+ VK+ Y + L +
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY----VKLYMYQLFRSLAY 171
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+H I HRD++ N+LL D K+ DF Q + + + Y AP
Sbjct: 172 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSRYYRAP 225
Query: 249 EYAM-TGQITQKSDVYSFGVVLLELLTGR 276
E T DV+S G VL ELL G+
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
++ +IG GS+G V+ AKL D G AIKK+ + +L ++ +L H +
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNI 88
Query: 128 VELLGYCMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGA 183
V L + S + VY + + + ++ R + + PV+ VK+ Y
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY----VKLYMYQL 144
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGT 242
+ L ++H I HRD++ N+LL D K+ DF Q + + +
Sbjct: 145 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICS 198
Query: 243 FGYHAPEYAM-TGQITQKSDVYSFGVVLLELLTGR 276
Y APE T DV+S G VL ELL G+
Sbjct: 199 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 75 LIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+IG GS+G V+ AKL D G AIKK+ + +L ++ +L H + V L +
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 93
Query: 134 CMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGAAKGLEF 189
S + VY + + + ++ R + + PV+ VK+ Y + L +
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY----VKLYMYQLFRSLAY 149
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+H I HRD++ N+LL D K+ DF Q + + + Y AP
Sbjct: 150 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSRYYRAP 203
Query: 249 EYAM-TGQITQKSDVYSFGVVLLELLTGR 276
E T DV+S G VL ELL G+
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 69 NFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHF 127
++ +IG GS+G V+ AKL D G AIKK+ + +L ++ +L H +
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNI 79
Query: 128 VELLGYCMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGA 183
V L + S + VY + + + ++ R + + PV+ VK+ Y
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY----VKLYMYQL 135
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGT 242
+ L ++H I HRD++ N+LL D K+ DF Q + + +
Sbjct: 136 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICS 189
Query: 243 FGYHAPEYAM-TGQITQKSDVYSFGVVLLELLTGR 276
Y APE T DV+S G VL ELL G+
Sbjct: 190 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 80/194 (41%), Gaps = 17/194 (8%)
Query: 92 GTPAAIKKLD----TSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFA 147
G A+K +D TSS D + S+ LKH H VELL +V++F
Sbjct: 51 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 110
Query: 148 TMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSN 207
L + V+ A+ G V + + L + H+ I+HRDV+
Sbjct: 111 DGADLCFEI-----VKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHC 162
Query: 208 VLLFDDFKS---KIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYS 264
VLL S K+ F + Q ++ L + +GT + APE + DV+
Sbjct: 163 VLLASKENSAPVKLGGFGVAIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWG 220
Query: 265 FGVVLLELLTGRKP 278
GV+L LL+G P
Sbjct: 221 CGVILFILLSGCLP 234
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 75 LIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+IG GS+G V+ AKL D G AIKK+ + +L ++ +L H + V L +
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 115
Query: 134 CMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGAAKGLEF 189
S + VY + + + ++ R + + PV+ VK+ Y + L +
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY----VKLYMYQLFRSLAY 171
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+H I HRD++ N+LL D K+ DF Q + + + Y AP
Sbjct: 172 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAP 225
Query: 249 EYAM-TGQITQKSDVYSFGVVLLELLTGR 276
E T DV+S G VL ELL G+
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 75 LIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+IG GS+G V+ AKL D G AIKK+ + +L ++ +L H + V L +
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 117
Query: 134 CMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGAAKGLEF 189
S + VY + + + ++ R + + PV+ VK+ Y + L +
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY----VKLYMYQLFRSLAY 173
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+H I HRD++ N+LL D K+ DF Q + + + Y AP
Sbjct: 174 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAP 227
Query: 249 EYAM-TGQITQKSDVYSFGVVLLELLTGR 276
E T DV+S G VL ELL G+
Sbjct: 228 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 38/223 (17%)
Query: 69 NFGTKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPES-DFAAQLSVVSRLKHEHF 127
NF TK + E G ++ + G +K L +S DF + + H +
Sbjct: 13 NFLTK--LNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 128 VELLGYCME--SNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAK 185
+ +LG C + + L+ + GSL++VLH V+ +Q VK A A+
Sbjct: 70 LPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNF-------VVDQSQAVKFALDXAR 122
Query: 186 GLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKI--ADFNLTNQSSDTAARLHSTRVLGTF 243
G FLH ++P I + S +V + +D ++I AD + QS
Sbjct: 123 GXAFLH-TLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRX------------ 169
Query: 244 GYHAPEYAMTGQITQK--------SDVYSFGVVLLELLTGRKP 278
+AP + + +K +D +SF V+L EL+T P
Sbjct: 170 --YAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVP 210
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 75 LIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+IG GS+G V+ AKL D G AIKK+ + +L ++ +L H + V L +
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 109
Query: 134 CMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGAAKGLEF 189
S + VY + + + ++ R + + PV+ VK+ Y + L +
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLFRSLAY 165
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+H I HRD++ N+LL D K+ DF Q + + + Y AP
Sbjct: 166 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAP 219
Query: 249 EYAM-TGQITQKSDVYSFGVVLLELLTGR 276
E T DV+S G VL ELL G+
Sbjct: 220 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 75 LIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+IG GS+G V+ AKL D G AIKK+ + +L ++ +L H + V L +
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 119
Query: 134 CMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGAAKGLEF 189
S + VY + + + ++ R + + PV+ VK+ Y + L +
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY----VKLYMYQLFRSLAY 175
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+H I HRD++ N+LL D K+ DF Q + + + Y AP
Sbjct: 176 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAP 229
Query: 249 EYAMTG-QITQKSDVYSFGVVLLELLTGR 276
E T DV+S G VL ELL G+
Sbjct: 230 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 80/194 (41%), Gaps = 17/194 (8%)
Query: 92 GTPAAIKKLD----TSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFA 147
G A+K +D TSS D + S+ LKH H VELL +V++F
Sbjct: 49 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108
Query: 148 TMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSN 207
L + V+ A+ G V + + L + H+ I+HRDV+
Sbjct: 109 DGADL-----CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHC 160
Query: 208 VLLFDDFKS---KIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYS 264
VLL S K+ F + Q ++ L + +GT + APE + DV+
Sbjct: 161 VLLASKENSAPVKLGGFGVAIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWG 218
Query: 265 FGVVLLELLTGRKP 278
GV+L LL+G P
Sbjct: 219 CGVILFILLSGCLP 232
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 79/188 (42%), Gaps = 21/188 (11%)
Query: 97 IKKLDTSSAPE--PESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHD 154
IKK T S+ D ++S++ ++H + + L + IL+ + G L D
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 155 VLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF 214
L ++ + E L G+ +LH I H D++ N++L D
Sbjct: 104 FLAEKESLTEEEATEFLK---------QILNGVYYLH---SLQIAHFDLKPENIMLLDRN 151
Query: 215 ----KSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
+ KI DF L ++ D + + GT + APE + ++D++S GV+
Sbjct: 152 VPKPRIKIIDFGLAHKI-DFGNEFKN--IFGTPAFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 271 ELLTGRKP 278
LL+G P
Sbjct: 209 ILLSGASP 216
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 19/208 (9%)
Query: 76 IGEGSYGRVFYA-KLTDGTPAAIKKLDTSS-APEPESDFAAQLSVVSRLKHEHFVELLGY 133
+G+G++ V K+ G A K ++T + + + LKH + V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 134 CMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEK 193
E + L++ T G L + + R+ A+ + Q++ LE +
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCI---QQI---------LEAVLHC 137
Query: 194 VQPPIVHRDVRSSNVLLFDDFKS---KIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEY 250
Q +VHRD++ N+LL K K+ADF L + GT GY +PE
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEV 195
Query: 251 AMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ D+++ GV+L LL G P
Sbjct: 196 LRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 75 LIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+IG GS+G V+ AKL D G AIKK+ + +L ++ +L H + V L +
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 86
Query: 134 CMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGAAKGLEF 189
S + VY + + + ++ R + + PV+ VK+ Y + L +
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY----VKLYMYQLFRSLAY 142
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+H I HRD++ N+LL D K+ DF Q + + + Y AP
Sbjct: 143 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAP 196
Query: 249 EYAM-TGQITQKSDVYSFGVVLLELLTGR 276
E T DV+S G VL ELL G+
Sbjct: 197 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 89/219 (40%), Gaps = 27/219 (12%)
Query: 75 LIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
++G+G+ VF + G AIK + S P + V+ +L H++ V+L
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 134 CMESNNR--ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
E+ R +L+ +F GSL+ VL G L V G+ L
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI------VLRDVVGGMNHLR 129
Query: 192 EKVQPPIVHRDVRSSNVL--LFDDFKS--KIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
E IVHR+++ N++ + +D +S K+ DF + D + GT Y
Sbjct: 130 EN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---QFVXLYGTEEYLH 183
Query: 248 P---EYAMTGQITQKS-----DVYSFGVVLLELLTGRKP 278
P E A+ + QK D++S GV TG P
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 198 IVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMT---- 253
++HRDV+ N+LL K+ADF T D +H +GT Y +PE +
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFG-TCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGD 253
Query: 254 GQITQKSDVYSFGVVLLELLTGRKP 278
G ++ D +S GV L E+L G P
Sbjct: 254 GYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 75 LIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
+IG GS+G V+ AKL D G AIKK+ + +L ++ +L H + V L +
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 160
Query: 134 CMES-NNRILVYQFATMGSLHDVLH--GRKGVQGAEPGPVLTWNQRVKV-AYGAAKGLEF 189
S + VY + + + ++ R + + PV+ VK+ Y + L +
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY----VKLYMYQLFRSLAY 216
Query: 190 LHEKVQPPIVHRDVRSSNVLLFDDFKS-KIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
+H I HRD++ N+LL D K+ DF Q + + + Y AP
Sbjct: 217 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAP 270
Query: 249 EYAMTG-QITQKSDVYSFGVVLLELLTGR 276
E T DV+S G VL ELL G+
Sbjct: 271 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 82/185 (44%), Gaps = 19/185 (10%)
Query: 98 KKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH 157
++L +S + +++++ ++H + + L + +L+ + + G L D L
Sbjct: 48 RRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA 107
Query: 158 GRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFD----D 213
++ LT ++ + G+ +LH K I H D++ N++L D +
Sbjct: 108 EKES---------LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPN 155
Query: 214 FKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELL 273
+ K+ DF + ++ A + GT + APE + ++D++S GV+ LL
Sbjct: 156 PRIKLIDFGIAHK---IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 212
Query: 274 TGRKP 278
+G P
Sbjct: 213 SGASP 217
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 82/185 (44%), Gaps = 19/185 (10%)
Query: 98 KKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH 157
++L +S + +++++ ++H + + L + +L+ + + G L D L
Sbjct: 41 RRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA 100
Query: 158 GRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFD----D 213
++ LT ++ + G+ +LH K I H D++ N++L D +
Sbjct: 101 EKES---------LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPN 148
Query: 214 FKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELL 273
+ K+ DF + ++ A + GT + APE + ++D++S GV+ LL
Sbjct: 149 PRIKLIDFGIAHK---IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 205
Query: 274 TGRKP 278
+G P
Sbjct: 206 SGASP 210
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 82/185 (44%), Gaps = 19/185 (10%)
Query: 98 KKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLH 157
++L +S + +++++ ++H + + L + +L+ + + G L D L
Sbjct: 62 RRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA 121
Query: 158 GRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFD----D 213
++ LT ++ + G+ +LH K I H D++ N++L D +
Sbjct: 122 EKES---------LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPN 169
Query: 214 FKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELL 273
+ K+ DF + ++ A + GT + APE + ++D++S GV+ LL
Sbjct: 170 PRIKLIDFGIAHK---IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 226
Query: 274 TGRKP 278
+G P
Sbjct: 227 SGASP 231
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 29/229 (12%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSA---PEPESDFAAQ 115
LD+ R+ + +G GS+GRV K + G A+K LD E E +
Sbjct: 40 LDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK 92
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++A G + H R+ + +EP Q
Sbjct: 93 -RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQ 149
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+++ K+ DF L + +
Sbjct: 150 IVLT-------FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKR-----VKGR 194
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ + GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 95/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPE--SDFAAQL 116
LD+ R+ + IG GS+GRV K + G A+K LD + + +
Sbjct: 40 LDQFERIKT-------IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQI 150
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+L+ K+ADF + + +
Sbjct: 151 VLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGRT 195
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 97 IKKLDTSSAPEPES--DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHD 154
IKK T S+ S D ++S++ ++H + + L + IL+ + G L D
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 155 VLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF 214
L ++ + E L G+ +LH I H D++ N++L D
Sbjct: 104 FLAEKESLTEEEATEFLK---------QILNGVYYLH---SLQIAHFDLKPENIMLLDRN 151
Query: 215 ----KSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
+ KI DF L ++ D + + GT + APE + ++D++S GV+
Sbjct: 152 VPKPRIKIIDFGLAHKI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 271 ELLTGRKP 278
LL+G P
Sbjct: 209 ILLSGASP 216
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 89/219 (40%), Gaps = 27/219 (12%)
Query: 75 LIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGY 133
++G+G+ VF + G AIK + S P + V+ +L H++ V+L
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 134 CMESNNR--ILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLH 191
E+ R +L+ +F GSL+ VL G L V G+ L
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI------VLRDVVGGMNHLR 129
Query: 192 EKVQPPIVHRDVRSSNVL--LFDDFKS--KIADFNLTNQSSDTAARLHSTRVLGTFGYHA 247
E IVHR+++ N++ + +D +S K+ DF + D + GT Y
Sbjct: 130 EN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---QFVSLYGTEEYLH 183
Query: 248 P---EYAMTGQITQKS-----DVYSFGVVLLELLTGRKP 278
P E A+ + QK D++S GV TG P
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 97 IKKLDTSSAPEPES--DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHD 154
IKK T S+ S D ++S++ ++H + + L + IL+ + G L D
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 155 VLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF 214
L ++ + E L G+ +LH I H D++ N++L D
Sbjct: 104 FLAEKESLTEEEATEFLK---------QILNGVYYLH---SLQIAHFDLKPENIMLLDRN 151
Query: 215 ----KSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
+ KI DF L ++ D + + GT + APE + ++D++S GV+
Sbjct: 152 VPKPRIKIIDFGLAHKI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 271 ELLTGRKP 278
LL+G P
Sbjct: 209 ILLSGASP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 97 IKKLDTSSAPEPES--DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHD 154
IKK T S+ S D ++S++ ++H + + L + IL+ + G L D
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 155 VLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF 214
L ++ + E L G+ +LH I H D++ N++L D
Sbjct: 104 FLAEKESLTEEEATEFLK---------QILNGVYYLH---SLQIAHFDLKPENIMLLDRN 151
Query: 215 ----KSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
+ KI DF L ++ D + + GT + APE + ++D++S GV+
Sbjct: 152 VPKPRIKIIDFGLAHKI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 271 ELLTGRKP 278
LL+G P
Sbjct: 209 ILLSGASP 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 97 IKKLDTSSAPEPES--DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHD 154
IKK T S+ S D ++S++ ++H + + L + IL+ + G L D
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 155 VLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF 214
L ++ + E L G+ +LH I H D++ N++L D
Sbjct: 104 FLAEKESLTEEEATEFLK---------QILNGVYYLH---SLQIAHFDLKPENIMLLDRN 151
Query: 215 ----KSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
+ KI DF L ++ D + + GT + APE + ++D++S GV+
Sbjct: 152 VPKPRIKIIDFGLAHKI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 271 ELLTGRKP 278
LL+G P
Sbjct: 209 ILLSGASP 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 97 IKKLDTSSAPEPES--DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHD 154
IKK T S+ S D ++S++ ++H + + L + IL+ + G L D
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 155 VLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF 214
L ++ + E L G+ +LH I H D++ N++L D
Sbjct: 104 FLAEKESLTEEEATEFLK---------QILNGVYYLH---SLQIAHFDLKPENIMLLDRN 151
Query: 215 ----KSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
+ KI DF L ++ D + + GT + APE + ++D++S GV+
Sbjct: 152 VPKPRIKIIDFGLAHKI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 271 ELLTGRKP 278
LL+G P
Sbjct: 209 ILLSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 97 IKKLDTSSAPEPES--DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHD 154
IKK T S+ S D ++S++ ++H + + L + IL+ + G L D
Sbjct: 43 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 102
Query: 155 VLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF 214
L ++ + E L G+ +LH I H D++ N++L D
Sbjct: 103 FLAEKESLTEEEATEFLK---------QILNGVYYLH---SLQIAHFDLKPENIMLLDRN 150
Query: 215 ----KSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
+ KI DF L ++ D + + GT + APE + ++D++S GV+
Sbjct: 151 VPKPRIKIIDFGLAHKI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 207
Query: 271 ELLTGRKP 278
LL+G P
Sbjct: 208 ILLSGASP 215
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 97 IKKLDTSSAPEPES--DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHD 154
IKK T S+ S D ++S++ ++H + + L + IL+ + G L D
Sbjct: 43 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 102
Query: 155 VLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF 214
L ++ + E L G+ +LH I H D++ N++L D
Sbjct: 103 FLAEKESLTEEEATEFLK---------QILNGVYYLH---SLQIAHFDLKPENIMLLDRN 150
Query: 215 ----KSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
+ KI DF L ++ D + + GT + APE + ++D++S GV+
Sbjct: 151 VPKPRIKIIDFGLAHKI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 207
Query: 271 ELLTGRKP 278
LL+G P
Sbjct: 208 ILLSGASP 215
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 79/188 (42%), Gaps = 21/188 (11%)
Query: 97 IKKLDTSSAPE--PESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHD 154
IKK T S+ D ++S++ ++H + + L + IL+ + G L D
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 155 VLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF 214
L ++ + E L G+ +LH I H D++ N++L D
Sbjct: 104 FLAEKESLTEEEATEFLK---------QILNGVYYLH---SLQIAHFDLKPENIMLLDRN 151
Query: 215 ----KSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
+ KI DF L ++ D + + GT + APE + ++D++S GV+
Sbjct: 152 VPKPRIKIIDFGLAHKI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 271 ELLTGRKP 278
LL+G P
Sbjct: 209 ILLSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 97 IKKLDTSSAPEPES--DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHD 154
IKK T S+ S D ++S++ ++H + + L + IL+ + G L D
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 155 VLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF 214
L ++ + E L G+ +LH I H D++ N++L D
Sbjct: 104 FLAEKESLTEEEATEFLK---------QILNGVYYLH---SLQIAHFDLKPENIMLLDRN 151
Query: 215 ----KSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
+ KI DF L ++ D + + GT + APE + ++D++S GV+
Sbjct: 152 VPKPRIKIIDFGLAHKI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 271 ELLTGRKP 278
LL+G P
Sbjct: 209 ILLSGASP 216
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDD-FKSKIADFN--LTNQSSDTAARLHSTRV 239
A +GLE+LH + I+H DV++ NVLL D ++ + DF L Q L +
Sbjct: 159 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 215
Query: 240 L-GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ GT + APE M K D++S ++L +L G P
Sbjct: 216 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDD-FKSKIADFN--LTNQSSDTAARLHSTRV 239
A +GLE+LH + I+H DV++ NVLL D ++ + DF L Q L +
Sbjct: 175 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 231
Query: 240 L-GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ GT + APE M K D++S ++L +L G P
Sbjct: 232 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 97 IKKLDTSSAPEPES--DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHD 154
IKK T S+ S D ++S++ ++H + + L + IL+ + G L D
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 155 VLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF 214
L ++ + E L G+ +LH I H D++ N++L D
Sbjct: 104 FLAEKESLTEEEATEFLK---------QILNGVYYLH---SLQIAHFDLKPENIMLLDRN 151
Query: 215 ----KSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
+ KI DF L ++ D + + GT + APE + ++D++S GV+
Sbjct: 152 VPKPRIKIIDFGLAHKI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 271 ELLTGRKP 278
LL+G P
Sbjct: 209 ILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 97 IKKLDTSSAPEPES--DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHD 154
IKK T S+ S D ++S++ ++H + + L + IL+ + G L D
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 155 VLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF 214
L ++ + E L G+ +LH I H D++ N++L D
Sbjct: 104 FLAEKESLTEEEATEFLK---------QILNGVYYLH---SLQIAHFDLKPENIMLLDRN 151
Query: 215 ----KSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
+ KI DF L ++ D + + GT + APE + ++D++S GV+
Sbjct: 152 VPKPRIKIIDFGLAHKI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 271 ELLTGRKP 278
LL+G P
Sbjct: 209 ILLSGASP 216
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 95/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPE--SDFAAQL 116
LD+ R+ + IG GS+GRV K + G A+K LD + + +
Sbjct: 40 LDQFERIKT-------IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS--HLRRIGRFSEPHARFYAAQI 150
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+L+ K+ADF + + +
Sbjct: 151 VLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGRT 195
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L +S T +
Sbjct: 131 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS---TNFMMTPYV 184
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
T Y APE + + D++S G ++ EL+ G
Sbjct: 185 VTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 27/221 (12%)
Query: 65 RLTSNFGTKALIGEGSYG--RVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ T + K IG GSY + K T+ A+K +D S + D ++ ++ R
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATN-MEFAVKIIDKS-----KRDPTEEIEILLRY 72
Query: 123 -KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAY 181
+H + + L + +V + G L D + +K E VL +
Sbjct: 73 GQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVL---------F 123
Query: 182 GAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS----KIADFNLTNQSSDTAARLHST 237
K +E+LH + +VHRD++ SN+L D+ + +I DF Q L +
Sbjct: 124 TITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP 180
Query: 238 RVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
F APE D++S GV+L +LTG P
Sbjct: 181 CYTANFV--APEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 95/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPE--SDFAAQL 116
LD+ R+ + IG GS+GRV K + G A+K LD + + +
Sbjct: 40 LDQFERIKT-------IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS--HLRRIGRFSEPHARFYAAQI 150
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+L+ K+ADF + + +
Sbjct: 151 VLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGRT 195
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDD-FKSKIADFN--LTNQSSDTAARLHSTRV 239
A +GLE+LH + I+H DV++ NVLL D ++ + DF L Q L +
Sbjct: 173 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 229
Query: 240 L-GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ GT + APE M K D++S ++L +L G P
Sbjct: 230 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 19/168 (11%)
Query: 115 QLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWN 174
++S++ ++ H + + L + +L+ + + G L D L ++ + E +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK-- 122
Query: 175 QRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF----KSKIADFNLTNQSSDT 230
G+ +LH K I H D++ N++L D K+ DF L ++ D
Sbjct: 123 -------QILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 19/168 (11%)
Query: 115 QLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWN 174
++S++ ++ H + + L + +L+ + + G L D L ++ + E +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK-- 122
Query: 175 QRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF----KSKIADFNLTNQSSDT 230
G+ +LH K I H D++ N++L D K+ DF L ++ D
Sbjct: 123 -------QILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 79/188 (42%), Gaps = 21/188 (11%)
Query: 97 IKKLDTSSAPE--PESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHD 154
IKK T S+ D ++S++ ++H + + L + IL+ + G L D
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 155 VLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF 214
L ++ + E L G+ +LH I H D++ N++L D
Sbjct: 104 FLAEKESLTEEEATEFLK---------QILNGVYYLH---SLQIAHFDLKPENIMLLDRN 151
Query: 215 ----KSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
+ KI DF L ++ D + + GT + APE + ++D++S GV+
Sbjct: 152 VPKPRIKIIDFGLAHKI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 271 ELLTGRKP 278
LL+G P
Sbjct: 209 ILLSGASP 216
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 27/220 (12%)
Query: 66 LTSNFGTKALIGEGSYG--RVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL- 122
+ + K IG GSY + K T+ A+K +D S + D + ++ ++ R
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKATN-MEYAVKVIDKS-----KRDPSEEIEILLRYG 78
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+H + + L + + LV + G L D + +K E VL +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL---------HT 129
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS----KIADFNLTNQSSDTAARLHSTR 238
K +E+LH + +VHRD++ SN+L D+ + +I DF Q L +
Sbjct: 130 IGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
F APE + D++S G++L +L G P
Sbjct: 187 YTANFV--APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 85/211 (40%), Gaps = 29/211 (13%)
Query: 76 IGEGSYGRVFYAKLTD---GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLG 132
+G GS+G V ++ D G A+KK+ E A +L + L V L G
Sbjct: 101 LGRGSFGEVH--RMEDKQTGFQCAVKKVRL------EVFRAEELMACAGLTSPRIVPLYG 152
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA-KGLEFLH 191
E + + GSL ++ QG P R G A +GLE+LH
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLVK----EQGCLP------EDRALYYLGQALEGLEYLH 202
Query: 192 EKVQPPIVHRDVRSSNVLLFDD-FKSKIADFN---LTNQSSDTAARLHSTRVLGTFGYHA 247
+ I+H DV++ NVLL D + + DF + L + GT + A
Sbjct: 203 SRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMA 259
Query: 248 PEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
PE + K DV+S ++L +L G P
Sbjct: 260 PEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + + T +
Sbjct: 133 YQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYV 186
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
T Y APE + + D++S GV++ E++ G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 19/168 (11%)
Query: 115 QLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWN 174
++S++ ++ H + + L + +L+ + + G L D L ++ + E +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK-- 122
Query: 175 QRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF----KSKIADFNLTNQSSDT 230
G+ +LH K I H D++ N++L D K+ DF L ++ D
Sbjct: 123 -------QILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 19/168 (11%)
Query: 115 QLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWN 174
++S++ ++ H + + L + +L+ + + G L D L ++ + E +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK-- 122
Query: 175 QRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF----KSKIADFNLTNQSSDT 230
G+ +LH K I H D++ N++L D K+ DF L ++ D
Sbjct: 123 -------QILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + + T +
Sbjct: 133 YQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYV 186
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
T Y APE + + D++S GV++ E++ G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 27/220 (12%)
Query: 66 LTSNFGTKALIGEGSYGRV--FYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL- 122
+ + K IG GSY K T+ A+K +D S + D + ++ ++ R
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKATN-MEYAVKVIDKS-----KRDPSEEIEILLRYG 78
Query: 123 KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYG 182
+H + + L + + LV + G L D + +K E VL +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL---------HT 129
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS----KIADFNLTNQSSDTAARLHSTR 238
K +E+LH + +VHRD++ SN+L D+ + +I DF Q L +
Sbjct: 130 IGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
F APE + D++S G++L +L G P
Sbjct: 187 YTANFV--APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 9/116 (7%)
Query: 166 EPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF---KSKIADFN 222
E +++ N +++ +G+ +LH Q IVH D++ N+LL + KI DF
Sbjct: 123 ELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFG 179
Query: 223 LTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
++ + A L ++GT Y APE IT +D+++ G++ LLT P
Sbjct: 180 MSRKIGH-ACELR--EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 19/168 (11%)
Query: 115 QLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWN 174
++S++ ++ H + + L + +L+ + + G L D L ++ + E +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK-- 122
Query: 175 QRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF----KSKIADFNLTNQSSDT 230
G+ +LH K I H D++ N++L D K+ DF L ++ D
Sbjct: 123 -------QILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 87/211 (41%), Gaps = 29/211 (13%)
Query: 76 IGEGSYGRVFYAKLTD---GTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLG 132
+G GS+G V ++ D G A+KK+ E A +L + L V L G
Sbjct: 82 LGRGSFGEVH--RMEDKQTGFQCAVKKVRL------EVFRAEELMACAGLTSPRIVPLYG 133
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAA-KGLEFLH 191
E + + GSL ++ QG P R G A +GLE+LH
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLVK----EQGCLP------EDRALYYLGQALEGLEYLH 183
Query: 192 EKVQPPIVHRDVRSSNVLLFDD-FKSKIADF-NLTNQSSDTAAR--LHSTRVLGTFGYHA 247
+ I+H DV++ NVLL D + + DF + D + L + GT + A
Sbjct: 184 SRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMA 240
Query: 248 PEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
PE + K DV+S ++L +L G P
Sbjct: 241 PEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPE-PESDFAAQLS 117
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 41 LDQFERIRT-------LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 118 VVSRLKHEHFVELLGYCMESN-NRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
+ + + F+ L + + N N +V ++A G + H R+ + +EP Q
Sbjct: 94 RIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFS--HLRRIGRFSEPHARFYAAQI 151
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+L+ K+ADF + + +
Sbjct: 152 VLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGRT 196
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 89/219 (40%), Gaps = 21/219 (9%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSS-APEPESDFAAQLSVVSRLK 123
+T + +G+G++ V K+ G A K ++T + + + LK
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + V L E LV+ T G L + + R+ A+ + Q++
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI---QQI------ 112
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS---KIADFNLTNQ-SSDTAARLHSTRV 239
LE ++ IVHRD++ N+LL K K+ADF L + D A
Sbjct: 113 ---LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG---F 166
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
GT GY +PE + D+++ GV+L LL G P
Sbjct: 167 AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 89/219 (40%), Gaps = 21/219 (9%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSS-APEPESDFAAQLSVVSRLK 123
+T + +G+G++ V K+ G A K ++T + + + LK
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGA 183
H + V L E LV+ T G L + + R+ A+ + Q++
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI---QQI------ 112
Query: 184 AKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS---KIADFNLTNQ-SSDTAARLHSTRV 239
LE ++ IVHRD++ N+LL K K+ADF L + D A
Sbjct: 113 ---LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA-- 167
Query: 240 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
GT GY +PE + D+++ GV+L LL G P
Sbjct: 168 -GTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 29/229 (12%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSA---PEPESDFAAQ 115
LD+ R+ + +G GS+GRV K + G A+K LD E E +
Sbjct: 40 LDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK 92
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++A G + H R+ + +EP Q
Sbjct: 93 -RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQ 149
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+++ ++ DF L + +
Sbjct: 150 IVLT-------FEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKR-----VKGR 194
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ + GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 97 IKKLDTSSAPEPES--DFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHD 154
IKK T S+ S D ++S++ ++H + + L + IL+ + G L D
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFD 103
Query: 155 VLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF 214
L ++ + E L G+ +LH I H D++ N++L D
Sbjct: 104 FLAEKESLTEEEATEFLK---------QILNGVYYLH---SLQIAHFDLKPENIMLLDRN 151
Query: 215 ----KSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
+ KI DF L ++ D + + GT + APE + ++D++S GV+
Sbjct: 152 VPKPRIKIIDFGLAHKI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 271 ELLTGRKP 278
LL+G P
Sbjct: 209 ILLSGASP 216
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 19/168 (11%)
Query: 115 QLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWN 174
++S++ ++ H + + L + +L+ + + G L D L ++ + E +
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK-- 122
Query: 175 QRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDF----KSKIADFNLTNQSSDT 230
G+ +LH K I H D++ N++L D K+ DF L ++ D
Sbjct: 123 -------QILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 231 AARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 89/221 (40%), Gaps = 27/221 (12%)
Query: 65 RLTSNFGTKALIGEGSYG--RVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL 122
+ T + K IG GSY + K T+ A+K +D S + D ++ ++ R
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATN-XEFAVKIIDKS-----KRDPTEEIEILLRY 72
Query: 123 -KHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAY 181
+H + + L + +V + G L D + +K E VL +
Sbjct: 73 GQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVL---------F 123
Query: 182 GAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS----KIADFNLTNQSSDTAARLHST 237
K +E+LH + +VHRD++ SN+L D+ + +I DF Q L +
Sbjct: 124 TITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTP 180
Query: 238 RVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
F APE D++S GV+L LTG P
Sbjct: 181 CYTANFV--APEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 87/220 (39%), Gaps = 19/220 (8%)
Query: 64 NRLTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSS-APEPESDFAAQLSVVSR 121
R T + +G+G++ V K+ G A ++T + + +
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRL 66
Query: 122 LKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAY 181
LKH + V L E + L++ T G L + + R+ A+ + Q++
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCI---QQI---- 119
Query: 182 GAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS---KIADFNLTNQSSDTAARLHSTR 238
LE + Q +VHR+++ N+LL K K+ADF L +
Sbjct: 120 -----LEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG-- 172
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
GT GY +PE + D+++ GV+L LL G P
Sbjct: 173 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 37/226 (16%)
Query: 65 RLTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL- 122
+ + +LIG+GS+G+V A + AIK + A F Q + RL
Sbjct: 32 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKA------FLNQAQIEVRLL 85
Query: 123 ----KHE-----HFVELLGYCMESNNRILVYQFATMGSLHDVLHGR--KGVQGAEPGPVL 171
KH+ + V L + M N+ LV++ + +L+D+L +GV
Sbjct: 86 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGV--------- 135
Query: 172 TWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS--KIADFNLTNQSSD 229
+ N K A L FL + I+H D++ N+LL + +S KI DF + Q
Sbjct: 136 SLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 194
Query: 230 TAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
+ +R Y +PE + D++S G +L+E+ TG
Sbjct: 195 RIYQXIQSRF-----YRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 235
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 37/226 (16%)
Query: 65 RLTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL- 122
+ + +LIG+GS+G+V A + AIK + A F Q + RL
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKA------FLNQAQIEVRLL 104
Query: 123 ----KHE-----HFVELLGYCMESNNRILVYQFATMGSLHDVLHGR--KGVQGAEPGPVL 171
KH+ + V L + M N+ LV++ + +L+D+L +GV
Sbjct: 105 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGV--------- 154
Query: 172 TWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS--KIADFNLTNQSSD 229
+ N K A L FL + I+H D++ N+LL + +S KI DF + Q
Sbjct: 155 SLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 213
Query: 230 TAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
+ +R Y +PE + D++S G +L+E+ TG
Sbjct: 214 RIYQXIQSRF-----YRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + + T +
Sbjct: 134 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYV 187
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
T Y APE + + D++S G ++ E++ G
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR 238
+ Y G++ LH I+HRD++ SN+++ D KI DF L + + T
Sbjct: 131 LLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTP 184
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
+ T Y APE + + D++S G ++ E++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 95/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPE--SDFAAQL 116
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 40 LDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
++ + V+L +++N +V ++A G + H R+ + +EP Q
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQI 150
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+++ K+ DF + + +
Sbjct: 151 VLT-------FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VKGRT 195
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + + T +
Sbjct: 133 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYV 186
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
T Y APE + + D++S G ++ E++ G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + T +
Sbjct: 133 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---CTNFMMTPYV 186
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
T Y APE + D++S G ++ EL+ G
Sbjct: 187 VTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + + T +
Sbjct: 133 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYV 186
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
T Y APE + + D++S G ++ E++ G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 27/229 (11%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQ 115
+LD+ +R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 39 QLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++ G + H R+ + AEP Q
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFAEPHARFYAAQ 149
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+L+ ++ DF + +
Sbjct: 150 IVLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ + GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR 238
+ Y G++ LH I+HRD++ SN+++ D KI DF L + + T
Sbjct: 131 LLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTP 184
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
+ T Y APE + + D++S G ++ E++ G
Sbjct: 185 EVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + + T +
Sbjct: 133 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYV 186
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
T Y APE + + D++S G ++ E++ G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + + T +
Sbjct: 133 YQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYV 186
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
T Y APE + + D++S G ++ E++ G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPE--SDFAAQL 116
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 40 LDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
++ + V+L +++N +V ++A G + H R+ + EP Q
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFXEPHARFYAAQI 150
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+++ K+ DF + + +
Sbjct: 151 VLT-------FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VKGRT 195
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + + T +
Sbjct: 133 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYV 186
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
T Y APE + + D++S G ++ E++ G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVL--------LFDDFKS-----------KIA 219
+AY L FLHE + H D++ N+L L+++ KS ++A
Sbjct: 128 MAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 184
Query: 220 DFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
DF S T H T ++ T Y PE + Q DV+S G +L E G
Sbjct: 185 DF-----GSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 95/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPE-PESDFAAQLS 117
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 41 LDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 118 VVSRLKHEHFVELLGYCMESN-NRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
+ + + F+ L + + N N +V ++A G + H R+ + +EP Q
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQI 151
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+++ K+ DF + + +
Sbjct: 152 VLT-------FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VKGRT 196
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 95/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPE-PESDFAAQLS 117
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 41 LDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 118 VVSRLKHEHFVELLGYCMESN-NRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
+ + + F+ L + + N N +V ++A G + H R+ + +EP Q
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQI 151
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+++ K+ DF + + +
Sbjct: 152 VLT-------FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VKGRT 196
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 104/254 (40%), Gaps = 29/254 (11%)
Query: 43 KTGTPQKALPIEIPQIKLDELNRLTS---------NFGTKALIGEGSYGRVFYAKLTD-G 92
K G+ Q+++ + + K D L + S F +G GS+GRV K + G
Sbjct: 8 KKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETG 67
Query: 93 TPAAIKKLDTSSAPEPE--SDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMG 150
A+K LD + + + ++ + V+L +++N +V ++A G
Sbjct: 68 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG 127
Query: 151 SLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL 210
+ H R+ + +EP Q V E+LH +++RD++ N+++
Sbjct: 128 EMFS--HLRRIGRFSEPHARFYAAQIVLT-------FEYLH---SLDLIYRDLKPENLMI 175
Query: 211 FDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
K+ DF + + + + GT Y APE ++ + D ++ GV++
Sbjct: 176 DQQGYIKVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 271 ELLTGRKPVDHTMP 284
E+ G P P
Sbjct: 231 EMAAGYPPFFADQP 244
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVL--------LFDDFKS-----------KIA 219
+AY L FLHE + H D++ N+L L+++ KS ++A
Sbjct: 137 MAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 193
Query: 220 DFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
DF S T H T ++ T Y PE + Q DV+S G +L E G
Sbjct: 194 DF-----GSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + + +
Sbjct: 135 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMVPFV 188
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
T Y APE + + D++S G ++ E++ G
Sbjct: 189 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 97/229 (42%), Gaps = 27/229 (11%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQ 115
+LD+ +R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 26 QLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 78
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 79 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQ 136
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+L+ + ++ DF + +
Sbjct: 137 IVLT-------FEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKR-----VKGR 181
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ + GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 182 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 96/229 (41%), Gaps = 27/229 (11%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQ 115
+LD+ +R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 39 QLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQ 149
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+L+ ++ DF + +
Sbjct: 150 IVLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ + GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVL--------LFDDFKS-----------KIA 219
+AY L FLHE + H D++ N+L L+++ KS ++A
Sbjct: 160 MAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 216
Query: 220 DFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
DF S T H T ++ T Y PE + Q DV+S G +L E G
Sbjct: 217 DF-----GSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 122 LK----HEHFVELLGYCMESNNRILVYQ-FATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQ-EELARSFFWQVL 124
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 125 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 170
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 171 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 216
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 23/209 (11%)
Query: 75 LIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYC 134
+IG GS+G VF AKL + AIKK+ + +L ++ +KH + V+L +
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFK-----NRELQIMRIVKHPNVVDLKAFF 101
Query: 135 MESNNRI------LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLE 188
+ ++ LV ++ H K Q P+L + Y + L
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTM---PMLLIKLYM---YQLLRSLA 155
Query: 189 FLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAP 248
++H I HRD++ N+LL D + + + A + + + + Y AP
Sbjct: 156 YIHSI---GICHRDIKPQNLLL-DPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-YRAP 210
Query: 249 EYAM-TGQITQKSDVYSFGVVLLELLTGR 276
E T D++S G V+ EL+ G+
Sbjct: 211 ELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 30/227 (13%)
Query: 72 TKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELL 131
++ ++G GS G V + G P A+K++ D A + +H +
Sbjct: 37 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFC-----DIALMEIKLLTESDDHPNVIR 91
Query: 132 GYCMESNNRILVYQFATMG-SLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFL 190
YC E+ +R L +L D++ K V +N + + A G+ L
Sbjct: 92 YYCSETTDRFLYIALELCNLNLQDLVES-KNVSDENLKLQKEYNP-ISLLRQIASGVAHL 149
Query: 191 HEKVQPPIVHRDVRSSNVLL-------------FDDFKSKIADFNLTNQ--SSDTAARLH 235
H I+HRD++ N+L+ ++ + I+DF L + S R +
Sbjct: 150 H---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 236 STRVLGTFGYHAPEY---AMTGQITQKSDVYSFGVVLLELLT-GRKP 278
GT G+ APE + ++T+ D++S G V +L+ G+ P
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 30/218 (13%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESD-FAAQLSVVSRLKH--EHFVELLG 132
IG G +VF AIK ++ A D + +++ +++L+ + + L
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y + +Y G++ D+ K + +P W ++ +Y LE +H
Sbjct: 80 YEITDQ---YIYMVMECGNI-DLNSWLKKKKSIDP-----WERK---SYWK-NMLEAVHT 126
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTFGYHAPEYA 251
Q IVH D++ +N L+ D K+ DF + NQ DT + + ++V GT Y PE
Sbjct: 127 IHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAI 184
Query: 252 MTGQITQKS-----------DVYSFGVVLLELLTGRKP 278
++++ DV+S G +L + G+ P
Sbjct: 185 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 20/216 (9%)
Query: 68 SNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSS---APEPESDFAAQLSVVSRLK 123
S+F +IG+GS+G+V A+ + A+K L + E + + + ++ +K
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 124 HEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKV-AYG 182
H V L ++ V + G L H ++ EP R + A
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEP--------RARFYAAE 147
Query: 183 AAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGT 242
A L +LH IV+RD++ N+LL + DF L ++ + + ++ GT
Sbjct: 148 IASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGT 202
Query: 243 FGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
Y APE + D + G VL E+L G P
Sbjct: 203 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 94/229 (41%), Gaps = 27/229 (11%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQ 115
+LD+ +R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 60 QLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 112
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 113 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQ 170
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+L+ ++ DF + L
Sbjct: 171 IVLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTL- 219
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 220 ----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 96/229 (41%), Gaps = 27/229 (11%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQ 115
+LD+ +R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 39 QLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQ 149
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+L+ ++ DF + +
Sbjct: 150 IVLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ + GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 96/229 (41%), Gaps = 27/229 (11%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQ 115
+LD+ +R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 39 QLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQ 149
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+L+ ++ DF + +
Sbjct: 150 IVLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ + GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 96/229 (41%), Gaps = 27/229 (11%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQ 115
+LD+ +R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 39 QLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQ 149
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+L+ ++ DF + +
Sbjct: 150 IVLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ + GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 37/226 (16%)
Query: 65 RLTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRL- 122
+ + +LIG+GS+G+V A + AIK + A F Q + RL
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKA------FLNQAQIEVRLL 104
Query: 123 ----KHE-----HFVELLGYCMESNNRILVYQFATMGSLHDVLHGR--KGVQGAEPGPVL 171
KH+ + V L + M N+ LV++ + +L+D+L +GV
Sbjct: 105 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGV--------- 154
Query: 172 TWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS--KIADFNLTNQSSD 229
+ N K A L FL + I+H D++ N+LL + + KI DF + Q
Sbjct: 155 SLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQ 213
Query: 230 TAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
+ +R Y +PE + D++S G +L+E+ TG
Sbjct: 214 RIYQXIQSRF-----YRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPE-PESDFAAQLS 117
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 41 LDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 118 VVSRLKHEHFVELLGYCMESN-NRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
+ + + F+ L + + N N +V ++A G + H R+ + EP Q
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFXEPHARFYAAQI 151
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+++ K+ DF + + +
Sbjct: 152 VLT-------FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VKGRT 196
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 30/227 (13%)
Query: 72 TKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELL 131
++ ++G GS G V + G P A+K++ D A + +H +
Sbjct: 37 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFC-----DIALMEIKLLTESDDHPNVIR 91
Query: 132 GYCMESNNRILVYQFATMG-SLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFL 190
YC E+ +R L +L D++ K V +N + + A G+ L
Sbjct: 92 YYCSETTDRFLYIALELCNLNLQDLVES-KNVSDENLKLQKEYNP-ISLLRQIASGVAHL 149
Query: 191 HEKVQPPIVHRDVRSSNVLL-------------FDDFKSKIADFNLTNQ--SSDTAARLH 235
H I+HRD++ N+L+ ++ + I+DF L + S R +
Sbjct: 150 H---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 236 STRVLGTFGYHAPEY---AMTGQITQKSDVYSFGVVLLELLT-GRKP 278
GT G+ APE + ++T+ D++S G V +L+ G+ P
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 96/229 (41%), Gaps = 27/229 (11%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQ 115
+LD+ +R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 40 QLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQ 150
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+L+ ++ DF + +
Sbjct: 151 IVLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 195
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ + GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 30/218 (13%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESD-FAAQLSVVSRLKH--EHFVELLG 132
IG G +VF AIK ++ A D + +++ +++L+ + + L
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y + +Y G++ D+ K + +P W ++ +Y LE +H
Sbjct: 76 YEITDQ---YIYMVMECGNI-DLNSWLKKKKSIDP-----WERK---SYWK-NMLEAVHT 122
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTFGYHAPEYA 251
Q IVH D++ +N L+ D K+ DF + NQ DT + + ++V GT Y PE
Sbjct: 123 IHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAI 180
Query: 252 MTGQITQKS-----------DVYSFGVVLLELLTGRKP 278
++++ DV+S G +L + G+ P
Sbjct: 181 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 95/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPE--SDFAAQL 116
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 40 LDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
++ + V+L +++N +V ++A G + H R+ + +EP Q
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQI 150
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+++ ++ DF + + +
Sbjct: 151 VLT-------FEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKR-----VKGRT 195
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 140
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 141 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 186
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 187 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 100
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 101 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 159
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 160 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 205
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 206 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 139
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 140 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 185
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 186 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 231
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 95/223 (42%), Gaps = 27/223 (12%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQ 115
+LD+ +R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 39 QLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQ 149
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+L+ ++ DF + +
Sbjct: 150 IVLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 278
+ + GT Y APE ++ + D ++ GV++ E+ G P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 140
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 141 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 186
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 187 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + + T +
Sbjct: 133 YQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTPYV 186
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLE------LLTGRKPVDH 281
T Y APE + + D++S G ++ E L GR +D
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPE--SDFAAQL 116
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 40 LDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQI 150
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+L+ ++ DF + + +
Sbjct: 151 VLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRT 195
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 96/229 (41%), Gaps = 27/229 (11%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQ 115
+LD+ +R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 39 QLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQ 149
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+L+ ++ DF + +
Sbjct: 150 IVLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ + GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 195 TWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 79/188 (42%), Gaps = 25/188 (13%)
Query: 101 DTSSAPEPESDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRK 160
D S DF +L +++ +K+E+ + G + ++Y++ S+
Sbjct: 79 DKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI-------- 130
Query: 161 GVQGAEPGPVLTWN-------QRVK-VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFD 212
++ E VL N Q +K + ++H + I HRDV+ SN+L+
Sbjct: 131 -LKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDK 187
Query: 213 DFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQ--KSDVYSFGVVLL 270
+ + K++DF + D ++ +R GT+ + PE+ K D++S G+ L
Sbjct: 188 NGRVKLSDFGESEYMVD--KKIKGSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGICLY 243
Query: 271 ELLTGRKP 278
+ P
Sbjct: 244 VMFYNVVP 251
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 140
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 141 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 186
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 187 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 139
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 140 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 185
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 186 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 231
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 30/218 (13%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESD-FAAQLSVVSRLKH--EHFVELLG 132
IG G +VF AIK ++ A D + +++ +++L+ + + L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y + +Y G++ D+ K + +P W ++ +Y LE +H
Sbjct: 124 YEITDQ---YIYMVMECGNI-DLNSWLKKKKSIDP-----WERK---SYWK-NMLEAVHT 170
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTFGYHAPEYA 251
Q IVH D++ +N L+ D K+ DF + NQ DT + + ++V GT Y PE
Sbjct: 171 IHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAI 228
Query: 252 MTGQITQKS-----------DVYSFGVVLLELLTGRKP 278
++++ DV+S G +L + G+ P
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR 238
+ Y G++ LH I+HRD++ SN+++ D KI DF L + + T
Sbjct: 124 LLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTP 177
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLE------LLTGRKPVD 280
+ T Y APE + + D++S G ++ E L GR +D
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 29 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 88
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 89 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 147
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 148 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 193
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 194 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 239
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 95/229 (41%), Gaps = 27/229 (11%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQ 115
+LD+ +R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 39 QLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++ G + H R+ + EP Q
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFYAAQ 149
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+L+ ++ DF + +
Sbjct: 150 IVLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ + GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 95/229 (41%), Gaps = 27/229 (11%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQ 115
+LD+ +R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 60 QLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 112
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++ G + H R+ + EP Q
Sbjct: 113 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFYAAQ 170
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+L+ ++ DF + +
Sbjct: 171 IVLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 215
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ + GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 216 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + + T +
Sbjct: 133 YQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTPYV 186
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLE------LLTGRKPVDH 281
T Y APE + + D++S G ++ E L GR +D
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 96/229 (41%), Gaps = 27/229 (11%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQ 115
+LD+ +R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 39 QLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQ 149
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+L+ ++ DF + +
Sbjct: 150 IVLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ + GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 195 TWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 54 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 113
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 114 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 172
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 173 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 218
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 219 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 264
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 152
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 153 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 198
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 199 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 167
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 168 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 213
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 214 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 259
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 153
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 154 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 199
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 200 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 30/218 (13%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESD-FAAQLSVVSRLKH--EHFVELLG 132
IG G +VF AIK ++ A D + +++ +++L+ + + L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y + +Y G++ D+ K + +P W ++ +Y LE +H
Sbjct: 96 YEITDQ---YIYMVMECGNI-DLNSWLKKKKSIDP-----WERK---SYWK-NMLEAVHT 142
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTFGYHAPEYA 251
Q IVH D++ +N L+ D K+ DF + NQ DT + + ++V GT Y PE
Sbjct: 143 IHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAI 200
Query: 252 MTGQITQKS-----------DVYSFGVVLLELLTGRKP 278
++++ DV+S G +L + G+ P
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 107/268 (39%), Gaps = 31/268 (11%)
Query: 29 PGGSARGEPRTNVVKTGTPQKALPIEIPQIKLDELNRLTS---------NFGTKALIGEG 79
P GS G K G+ Q+++ + + K D L + S F +G G
Sbjct: 16 PRGSHMGN--AAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTG 73
Query: 80 SYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQLSVVSRLKHEHFVELLGYCME 136
S+GRV K + G A+K LD + + + ++ + V+L +
Sbjct: 74 SFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 133
Query: 137 SNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQP 196
++N +V ++ G + H R+ + +EP Q V E+LH
Sbjct: 134 NSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIVLT-------FEYLH---SL 181
Query: 197 PIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQI 256
+++RD++ N+L+ ++ DF + + + + GT Y APE ++
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGY 236
Query: 257 TQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ D ++ GV++ E+ G P P
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 152
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 153 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 198
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 199 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 152
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 153 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 198
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 199 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 95/229 (41%), Gaps = 27/229 (11%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQ 115
+LD+ +R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 39 QLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++ G + H R+ + EP Q
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFYAAQ 149
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+L+ ++ DF + +
Sbjct: 150 IVLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ + GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + + T +
Sbjct: 171 YQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYV 224
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLE------LLTGRKPVDH 281
T Y APE + + D++S G ++ E L GR +D
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEY--AM 252
Q VHRD++ NVLL + ++ADF + +D + S+ +GT Y +PE AM
Sbjct: 193 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSVAVGTPDYISPEILQAM 251
Query: 253 ---TGQITQKSDVYSFGVVLLELLTGRKP 278
G+ + D +S GV + E+L G P
Sbjct: 252 EDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 153
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 154 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 199
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 200 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 152
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 153 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 198
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 199 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 125
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 126 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 171
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 172 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 30/218 (13%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESD-FAAQLSVVSRLKH--EHFVELLG 132
IG G +VF AIK ++ A D + +++ +++L+ + + L
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y + +Y G++ D+ K + +P W ++ +Y LE +H
Sbjct: 77 YEITDQ---YIYMVMECGNI-DLNSWLKKKKSIDP-----WERK---SYWK-NMLEAVHT 123
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTFGYHAPEYA 251
Q IVH D++ +N L+ D K+ DF + NQ DT + + ++V GT Y PE
Sbjct: 124 IHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAI 181
Query: 252 MTGQITQKS-----------DVYSFGVVLLELLTGRKP 278
++++ DV+S G +L + G+ P
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 120
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 121 EAVRHCHNXG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 166
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 167 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 125
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 126 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 171
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 172 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 153
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 154 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 199
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 200 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 124
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 125 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 170
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 171 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 216
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 125
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 126 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 171
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 172 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 153
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 154 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 199
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 200 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 95/229 (41%), Gaps = 27/229 (11%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQ 115
+LD+ +R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 34 QLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 86
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++ G + H R+ + EP Q
Sbjct: 87 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFYAAQ 144
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+L+ ++ DF + +
Sbjct: 145 IVLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 189
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ + GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 190 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 17/112 (15%)
Query: 178 KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLF-----DDFKSKIA---------DFNL 223
K+AY K + FLH + H D++ N+L + + KI D +
Sbjct: 122 KMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKV 178
Query: 224 TNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
+ S T H + ++ T Y APE + +Q DV+S G +L+E G
Sbjct: 179 VDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 195 QPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEY--AM 252
Q VHRD++ NVLL + ++ADF + +D + S+ +GT Y +PE AM
Sbjct: 209 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSVAVGTPDYISPEILQAM 267
Query: 253 ---TGQITQKSDVYSFGVVLLELLTGRKP 278
G+ + D +S GV + E+L G P
Sbjct: 268 EDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 187 LEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSS-DTAARLHSTRVLGTFGY 245
LE +H Q IVH D++ +N L+ D K+ DF + NQ DT + + ++V GT Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 222
Query: 246 HAPEYAMTGQITQKS-----------DVYSFGVVLLELLTGRKP 278
PE ++++ DV+S G +L + G+ P
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + + T +
Sbjct: 134 YQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYV 187
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLE------LLTGRKPVDH 281
T Y APE + + D++S G ++ E L GR +D
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 167
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 168 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 213
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 214 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 259
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 95/229 (41%), Gaps = 27/229 (11%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQ 115
+LD+ +R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 39 QLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++ G + H R+ + EP Q
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFYAAQ 149
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+L+ ++ DF + +
Sbjct: 150 IVLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ + GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 198 IVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL----GTFGYHAPEYAMT 253
I+HRD++ N+++ +DF K+ DF +AA L ++ GT Y APE M
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFG-------SAAYLERGKLFYTFCGTIEYCAPEVLMG 203
Query: 254 GQITQ-KSDVYSFGVVLLELLTGRKP 278
+ +++S GV L L+ P
Sbjct: 204 NPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR 238
+ Y G++ LH I+HRD++ SN+++ D KI DF L + + T
Sbjct: 124 LLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTP 177
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLE------LLTGRKPVD 280
+ T Y APE + + D++S G ++ E L GR +D
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + + T +
Sbjct: 134 YQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYV 187
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLE------LLTGRKPVDH 281
T Y APE + + D++S G ++ E L GR +D
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + + T +
Sbjct: 133 YQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYV 186
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLE------LLTGRKPVDH 281
T Y APE + + D++S G ++ E L GR +D
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + + T +
Sbjct: 171 YQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYV 224
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLE------LLTGRKPVD 280
T Y APE + + D++S G ++ E L GR +D
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 270
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + + T +
Sbjct: 127 YQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYV 180
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLE------LLTGRKPVD 280
T Y APE + + D++S G ++ E L GR +D
Sbjct: 181 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 226
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPE--SDFAAQL 116
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 40 LDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQI 150
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+L+ ++ DF + + +
Sbjct: 151 VLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRT 195
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + + T +
Sbjct: 133 YQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYV 186
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLE------LLTGRKPVDH 281
T Y APE + + D++S G ++ E L GR +D
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L + + T +
Sbjct: 132 YQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYV 185
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLE------LLTGRKPVDH 281
T Y APE + + D++S G ++ E L GR +D
Sbjct: 186 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 232
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR 238
+ Y G++ LH I+HRD++ SN+++ D KI DF L + + T
Sbjct: 125 LLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTP 178
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLE------LLTGRKPVD 280
+ T Y APE + + D++S G ++ E L GR +D
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 226
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPE--SDFAAQL 116
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 41 LDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQI 151
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+L+ ++ DF + + +
Sbjct: 152 VLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRT 196
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPE--SDFAAQL 116
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 40 LDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQI 150
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+L+ ++ DF + + +
Sbjct: 151 VLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRT 195
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPE--SDFAAQL 116
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 40 LDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQI 150
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+L+ ++ DF + + +
Sbjct: 151 VLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRT 195
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 32/223 (14%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYA--KLTDGTPAAIKKLDTSSAPEPESDFAA-QL 116
+D R+T +GEG+YG V+ A +T+ T AIK++ E A ++
Sbjct: 33 IDRYRRITK-------LGEGTYGEVYKAIDTVTNET-VAIKRIRLEHEEEGVPGTAIREV 84
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
S++ L+H + +EL ++ L++++A +D+ + + P ++
Sbjct: 85 SLLKELQHRNIIELKSVIHHNHRLHLIFEYAE----NDL------KKYMDKNPDVSMRVI 134
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS-----KIADFNLTNQSSDTA 231
Y G+ F H + +HRD++ N+LL S KI DF L
Sbjct: 135 KSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI 191
Query: 232 ARLHSTRVLGTFGYHAPEYAM-TGQITQKSDVYSFGVVLLELL 273
+ T + T Y PE + + + D++S + E+L
Sbjct: 192 RQF--THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 5 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 64
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 65 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 123
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 124 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 169
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 170 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 215
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 96/229 (41%), Gaps = 27/229 (11%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQ 115
+LD+ +R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 39 QLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQ 149
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+++ ++ DF + +
Sbjct: 150 IVLT-------FEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ + GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 195 TWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPE--SDFAAQL 116
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 41 LDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQI 151
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+L+ ++ DF + + +
Sbjct: 152 VLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRT 196
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 197 WTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 25/150 (16%)
Query: 142 LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHR 201
LV++ GS+ +H R+ E V+ A L+FLH K I HR
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQ---------DVASALDFLHNK---GIAHR 135
Query: 202 DVRSSNVLLFDDFKS---KIADFNLTN--QSSDTAARLHSTRVL---GTFGYHAPE---- 249
D++ N+L + KI DF+L + + + + + + +L G+ Y APE
Sbjct: 136 DLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
Query: 250 YAMTGQITQK-SDVYSFGVVLLELLTGRKP 278
++ I K D++S GV+L LL+G P
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR 238
+ Y G++ LH I+HRD++ SN+++ D KI DF L + + T
Sbjct: 136 LLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTP 189
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLE------LLTGRKPVDH 281
+ T Y APE + + D++S G ++ E L GR +D
Sbjct: 190 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 238
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 120
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 121 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 166
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 167 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 181 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVL 240
Y G++ LH I+HRD++ SN+++ D KI DF L +++ T+ + V
Sbjct: 133 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMEPEVV- 187
Query: 241 GTFGYHAPEYAMTGQITQKSDVYSFGVVLLE------LLTGRKPVDH 281
T Y APE + + D++S G ++ E L GR +D
Sbjct: 188 -TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQ 233
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 40/162 (24%)
Query: 63 LNRLTSNFGTK--ALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFA-AQLSVV 119
L RL SN K A+I E V + K G P ++ +S + ESD A+ ++
Sbjct: 58 LKRLLSNEEEKNRAIIQE-----VCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112
Query: 120 SRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKV 179
+ L VE L MES GP L+ + +K+
Sbjct: 113 TELCKGQLVEFLKK-MESR-----------------------------GP-LSCDTVLKI 141
Query: 180 AYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADF 221
Y + ++ +H + +PPI+HRD++ N+LL + K+ DF
Sbjct: 142 FYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDF 182
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR 238
+ Y G++ LH I+HRD++ SN+++ D KI DF L + + T
Sbjct: 131 LLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTP 184
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLE------LLTGRKPVD 280
+ T Y APE + + D++S G ++ E L GR +D
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 96/229 (41%), Gaps = 27/229 (11%)
Query: 59 KLDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQ 115
+LD+ +R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 39 QLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 116 LSVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQ 175
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQ 149
Query: 176 RVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLH 235
V E+LH +++RD++ N+L+ ++ DF + +
Sbjct: 150 IVLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ + GT Y APE ++ + D ++ GV++ ++ G P P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66 LTSNFGTKALIGEGSYGRVFYA-KLTDGTPAAIKKLD---TSSAPEPESDFAAQLSVVSR 121
L S + L+G G +G V+ +++D P AIK ++ S E + + VV
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 122 LK----HEHFVELLGYCMESNNRILVYQFAT-MGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
K + LL + ++ +L+ + + L D + R +Q E W
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ-EELARSFFWQVL 120
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL-FDDFKSKIADFNLTNQSSDTAARLH 235
V + G ++HRD++ N+L+ + + K+ DF DT
Sbjct: 121 EAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 166
Query: 236 STRVLGTFGYHAPEYAMTGQITQKS-DVYSFGVVLLELLTGRKPVDH 281
T GT Y PE+ + +S V+S G++L +++ G P +H
Sbjct: 167 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 93/228 (40%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPE--SDFAAQL 116
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 40 LDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
++ + V+L +++N +V ++ G + H R+ + EP Q
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARFYAAQI 150
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+L+ ++ DF + + +
Sbjct: 151 VLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRT 195
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR 238
+ Y G++ LH I+HRD++ SN+++ D KI DF L + + T
Sbjct: 131 LLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTP 184
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLE------LLTGRKPVD 280
+ T Y APE + + D++S G ++ E L GR +D
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 93/228 (40%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPE--SDFAAQL 116
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 40 LDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
++ + V+L +++N +V ++ G + H R+ + EP Q
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARFYAAQI 150
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+L+ ++ DF + + +
Sbjct: 151 VLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRT 195
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR 238
+ Y G++ LH I+HRD++ SN+++ D KI DF L + + T
Sbjct: 125 LLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTP 178
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLE------LLTGRKPVD 280
+ T Y APE + + D++S G ++ E L GR +D
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYID 226
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 72 TKALIGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESDFAAQLSVVSRLKHEHFVELL 131
++ ++G GS G V + G P A+K++ D A + +H +
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFC-----DIALMEIKLLTESDDHPNVIR 73
Query: 132 GYCMESNNRILVYQFATMG-SLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFL 190
YC E+ +R L +L D++ K V +N + + A G+ L
Sbjct: 74 YYCSETTDRFLYIALELCNLNLQDLVES-KNVSDENLKLQKEYNP-ISLLRQIASGVAHL 131
Query: 191 HEKVQPPIVHRDVRSSNVLL-------------FDDFKSKIADFNLTNQ--SSDTAARLH 235
H I+HRD++ N+L+ ++ + I+DF L + S ++ R +
Sbjct: 132 H---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTN 188
Query: 236 STRVLGTFGYHAPEYAMTG-------QITQKSDVYSFGVVLLELLT-GRKP 278
GT G+ APE ++T+ D++S G V +L+ G+ P
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPE-PESDFAAQLS 117
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 40 LDQFERIKT-------LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 118 VVSRLKHEHFVELLGYCMESN-NRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
+ + + F+ L Y + N N +V ++ G + H R+ + +EP Q
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQI 150
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+L+ ++ DF + + +
Sbjct: 151 VLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRT 195
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 178 KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS--KIADFNLTNQSSDTAARLH 235
K A+ + L+ LH+ I+H D++ N+LL +S K+ DF SS +
Sbjct: 204 KFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEHQRV 256
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
T + F Y APE + + D++S G +L ELLTG
Sbjct: 257 YTXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 93/228 (40%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPE--SDFAAQL 116
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 41 LDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
++ + V+L +++N +V ++ G + H R+ + EP Q
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARFYAAQI 151
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+L+ ++ DF + + +
Sbjct: 152 VLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRT 196
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPE-PESDFAAQLS 117
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 40 LDQFERIKT-------LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 118 VVSRLKHEHFVELLGYCMESN-NRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
+ + + F+ L Y + N N +V ++ G + H R+ + +EP Q
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQI 150
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+L+ ++ DF + + +
Sbjct: 151 VLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRT 195
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPE-PESDFAAQLS 117
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 40 LDQFERIKT-------LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 118 VVSRLKHEHFVELLGYCMESN-NRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
+ + + F+ L Y + N N +V ++ G + H R+ + +EP Q
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQI 150
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+L+ ++ DF + + +
Sbjct: 151 VLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRT 195
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAK-LTDGTPAAIKKLDTSSAPEPE--SDFAAQL 116
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 26 LDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 78
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 79 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQI 136
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+L+ ++ DF + + +
Sbjct: 137 VLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRT 181
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 182 WTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 103/254 (40%), Gaps = 29/254 (11%)
Query: 43 KTGTPQKALPIEIPQIKLDELNRLTS---------NFGTKALIGEGSYGRVFYAKLTD-G 92
K G+ Q+++ + + K D L + S F +G GS+GRV K + G
Sbjct: 8 KKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETG 67
Query: 93 TPAAIKKLDTSSAPEPE--SDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMG 150
A+K LD + + + ++ + V+L +++N +V ++ G
Sbjct: 68 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 127
Query: 151 SLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL 210
+ H R+ + +EP Q V E+LH +++RD++ N+L+
Sbjct: 128 EMFS--HLRRIGRFSEPHARFYAAQIVLT-------FEYLH---SLDLIYRDLKPENLLI 175
Query: 211 FDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
++ DF + + + + GT Y APE ++ + D ++ GV++
Sbjct: 176 DQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 271 ELLTGRKPVDHTMP 284
E+ G P P
Sbjct: 231 EMAAGYPPFFADQP 244
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 60 LDELNRLTSNFGTKALIGEGSYGRVFYAKLTD-GTPAAIKKLDTSSAPEPE--SDFAAQL 116
LD+ R+ + +G GS+GRV K + G A+K LD + + +
Sbjct: 41 LDQFERIKT-------LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 117 SVVSRLKHEHFVELLGYCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQR 176
++ + V+L +++N +V ++ G + H R+ + +EP Q
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQI 151
Query: 177 VKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHS 236
V E+LH +++RD++ N+L+ ++ DF + + +
Sbjct: 152 VLT-------FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRT 196
Query: 237 TRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMP 284
+ GT Y APE ++ + D ++ GV++ E+ G P P
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 103/254 (40%), Gaps = 29/254 (11%)
Query: 43 KTGTPQKALPIEIPQIKLDELNRLTS---------NFGTKALIGEGSYGRVFYAKLTD-G 92
K G+ Q+++ + + K D L + S F +G GS+GRV K + G
Sbjct: 8 KKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETG 67
Query: 93 TPAAIKKLDTSSAPEPE--SDFAAQLSVVSRLKHEHFVELLGYCMESNNRILVYQFATMG 150
A+K LD + + + ++ + V+L +++N +V ++ G
Sbjct: 68 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 127
Query: 151 SLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL 210
+ H R+ + +EP Q V E+LH +++RD++ N+L+
Sbjct: 128 EMFS--HLRRIGRFSEPHARFYAAQIVLT-------FEYLH---SLDLIYRDLKPENLLI 175
Query: 211 FDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLL 270
++ DF + + + + GT Y APE ++ + D ++ GV++
Sbjct: 176 DQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 271 ELLTGRKPVDHTMP 284
E+ G P P
Sbjct: 231 EMAAGYPPFFADQP 244
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 178 KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS--KIADFNLTNQSSDTAARLH 235
K A+ + L+ LH+ I+H D++ N+LL +S K+ DF SS +
Sbjct: 204 KFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEHQRV 256
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
T + F Y APE + + D++S G +L ELLTG
Sbjct: 257 YTXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Query: 179 VAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTR 238
+ Y G++ LH I+HRD++ SN+++ D KI DF L +++ T+ +
Sbjct: 131 LLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMEPEV 186
Query: 239 VLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLE------LLTGRKPVDH 281
V T Y APE + + D++S G ++ E L GR +D
Sbjct: 187 V--TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 233
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 25/150 (16%)
Query: 142 LVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHEKVQPPIVHR 201
LV++ GS+ +H R+ E V+ A L+FLH K I HR
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQ---------DVASALDFLHNK---GIAHR 135
Query: 202 DVRSSNVLLFDDFKS---KIADFNLTN--QSSDTAARLHSTRVL---GTFGYHAPE---- 249
D++ N+L + KI DF L + + + + + + +L G+ Y APE
Sbjct: 136 DLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
Query: 250 YAMTGQITQK-SDVYSFGVVLLELLTGRKP 278
++ I K D++S GV+L LL+G P
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 88/217 (40%), Gaps = 28/217 (12%)
Query: 76 IGEGSYGRVFYAKLTDGTPAAIKKLDTSSAPEPESD-FAAQLSVVSRLKH--EHFVELLG 132
IG G +VF AIK ++ A D + +++ +++L+ + + L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 133 YCMESNNRILVYQFATMGSLHDVLHGRKGVQGAEPGPVLTWNQRVKVAYGAAKGLEFLHE 192
Y + +Y G++ D+ K + +P W ++ +Y LE +H
Sbjct: 96 YEITDQ---YIYMVMECGNI-DLNSWLKKKKSIDP-----WERK---SYWK-NMLEAVHT 142
Query: 193 KVQPPIVHRDVRSSNVLLFDDFKSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAM 252
Q IVH D++ +N L+ D K+ DF + NQ + +GT Y PE
Sbjct: 143 IHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIK 201
Query: 253 TGQITQKS-----------DVYSFGVVLLELLTGRKP 278
++++ DV+S G +L + G+ P
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 178 KVAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFKS--KIADFNLTNQSSDTAARLH 235
K A+ + L+ LH+ I+H D++ N+LL +S K+ DF +
Sbjct: 204 KFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXI 260
Query: 236 STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTG 275
+R Y APE + + D++S G +L ELLTG
Sbjct: 261 QSRF-----YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,681,728
Number of Sequences: 62578
Number of extensions: 429262
Number of successful extensions: 3207
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 404
Number of HSP's that attempted gapping in prelim test: 1127
Number of HSP's gapped (non-prelim): 1085
length of query: 363
length of database: 14,973,337
effective HSP length: 100
effective length of query: 263
effective length of database: 8,715,537
effective search space: 2292186231
effective search space used: 2292186231
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)