BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046596
(258 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O07015|RSBQ_BACSU Sigma factor SigB regulation protein RsbQ OS=Bacillus subtilis
(strain 168) GN=rsbQ PE=1 SV=1
Length = 269
Score = 195 bits (496), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 107/251 (42%), Positives = 151/251 (60%), Gaps = 2/251 (0%)
Query: 8 HNVKVTGSGEQVIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRY 67
++VKV GSG+ I+ A GFG DQSVW + P +D+RV+L+D +G+G ++ +D NRY
Sbjct: 9 NHVKVKGSGKASIMFAPGFGCDQSVWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLNRY 68
Query: 68 STLEGYALDLLAILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLND 127
TL+GYA D+L + E L + + VGHSV A+IG +ASI RP+LF+ LVM+ SP YLND
Sbjct: 69 QTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLND 128
Query: 128 -VDYYGGFEQEELDQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIA 186
+YYGGFE+E+L L E M NY W + FA + +E + P IA
Sbjct: 129 PPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDRPEIKEELESRFCSTDPVIA 188
Query: 187 LSVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGH 246
A+ F SD R+ L V+VP I+Q D+ P + +Y+HQ+L S+ + M + GH
Sbjct: 189 RQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPYSSLKQ-MEARGH 247
Query: 247 LPQLSSPDIVI 257
P +S PD I
Sbjct: 248 CPHMSHPDETI 258
>sp|Q609V0|BIOH_METCA Pimelyl-[acyl-carrier protein] methyl ester esterase
OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB
11132 / Bath) GN=bioH PE=3 SV=1
Length = 254
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 15/225 (6%)
Query: 10 VKVTGSGEQVIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYST 69
++ +G G +V VL HG+G +W VP L D +RV D G G + P D++ T
Sbjct: 5 IETSGRGPEV-VLIHGWGMHGGIWSGFVPWLTDRFRVTRIDLPGHGHS-PMLADWS-LET 61
Query: 70 LEGYALDLLAILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDVD 129
+ G A+LE + VG S+ AM+ A+ P L ++ G+PR++ +
Sbjct: 62 VAG------AVLEAVP-RPAHWVGWSLGAMVALEAARMAPGAVASLTLLCGTPRFVAEPG 114
Query: 130 YYGGFEQEELDQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRP----DI 185
+ G E L + + S+Y+ C F L G + + R+ + RP
Sbjct: 115 WP-GMEAVTLMRFADGFLSDYEDACRRFLALQAWGMPNERELLRGVRSQLSGRPPPERPA 173
Query: 186 ALSVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQ 230
L+ + + +D+R +L + P + +D VPV + + L +
Sbjct: 174 LLAGLEVLRHADLRGVLRELPQPVQALLGRRDRLVPVELGDALAR 218
>sp|Q2Y9Y7|BIOH_NITMU Pimelyl-[acyl-carrier protein] methyl ester esterase
OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB
11849) GN=bioH PE=3 SV=1
Length = 263
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 101/242 (41%), Gaps = 7/242 (2%)
Query: 20 IVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLLA 79
+VL HG+ +W L +R+ L D G G + + R G + D++
Sbjct: 17 LVLLHGWAMHSGMWGSTRRSLAQHFRLHLVDLPGHGFSR-GALPYKRGEK-NGVSEDMVE 74
Query: 80 ILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDVDYYGGFEQEEL 139
+ E+ C++ G S+ + ++ P K+++ S +P ++ D+ G E+ L
Sbjct: 75 RVVEVLPPDCVICGWSLGGQLAIELALREPARVEKIILTSTTPSFVKREDWQWGMEELTL 134
Query: 140 DQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAV-QEFSRTLFNM---RPDIALSVAQTIFQ 195
E +R ++ F L V G D+ V E R LF P+ + Q +
Sbjct: 135 KAFAENLRRDFSTTMKRFLTLQVSGGGDAGKVLPEMRRLLFERSAPEPEALEAGLQIVLA 194
Query: 196 SDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGHLPQLSSPDI 255
+D+R L + P +I D+ + ++ Q D + ++ + H+P LS PD
Sbjct: 195 NDLRGKLRNIVQPTLLIHGENDVIAHPEAAAWMKQQ-FQDVELAMLPNCSHVPFLSYPDK 253
Query: 256 VI 257
I
Sbjct: 254 FI 255
>sp|Q82SL8|BIOH_NITEU Pimelyl-[acyl-carrier protein] methyl ester esterase
OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC
14298) GN=bioH PE=3 SV=2
Length = 252
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 108/254 (42%), Gaps = 23/254 (9%)
Query: 9 NVKVTGSGEQVIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYS 68
+++ TG+G +++L HG+ VW +V L +R+ D G G +
Sbjct: 5 HIETTGNGPDLVML-HGWAMHSGVWDGVVESLSQRFRLHQVDLPGHGAS----------- 52
Query: 69 TLEGYALDLLAILEELQIDSC----ILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRY 124
ALD L + E+ D + G S+ + ++ P+ +LV+++ +P +
Sbjct: 53 --RDCALDSLDQMTEVIADRLPGRYSVCGWSLGGQVAIRLALQAPERVQQLVLVASTPCF 110
Query: 125 LNDVDYYGGFEQEELDQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAVQEFSR-TLFNMRP 183
+ D+ G E L E + +Y + F L V G D V + R ++ +P
Sbjct: 111 VRRADWPWGMEDSTLTLFMENLARDYTQTLNRFLTLQVSGSEDQARVLAWLRKSILRGQP 170
Query: 184 DI--ALSVAQTIFQ-SDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEV 240
L I Q SD+R L VS P +I D+ P ++++ Q+L +V +
Sbjct: 171 PTPATLQAGLKILQTSDLRAELNQVSQPVLLIHGRNDVITPAGAADWMQQHLPRARLV-L 229
Query: 241 MSSDGHLPQLSSPD 254
GH P LS P+
Sbjct: 230 FPHCGHAPFLSFPE 243
>sp|Q2NQH6|BIOH_SODGM Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Sodalis
glossinidius (strain morsitans) GN=bioH PE=3 SV=1
Length = 257
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 23/251 (9%)
Query: 11 KVTGSGEQVIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTL 70
+ TG+G++ +VL HG+G + VW ++VP L +R+ L D G G +
Sbjct: 7 QTTGTGDRDLVLLHGWGLNAEVWSYIVPRLATHFRLHLVDLPGYGRSR------------ 54
Query: 71 EGY-ALDLLAILEELQIDS---CILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLN 126
GY AL L + EE+ + + +G S+ ++ + P LV ++ SPR+
Sbjct: 55 -GYGALTLEEMAEEVASRAPHGALWLGWSLGGLVATTVARRCPHAVAGLVTVASSPRFCA 113
Query: 127 DVDYYGGFEQEELDQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIA 186
D D + G E L+ +R ++ S F L G + + +++ P A
Sbjct: 114 DGD-WPGIRPEVLEGFARELRQDFTRTVSRFLGLQTLGTASARQDTRWLKSVVLAHPAPA 172
Query: 187 LSVAQT----IFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMS 242
+ V + SD+R+ L + VP + D VP + L L S V +
Sbjct: 173 IEVLTGGLALLRTSDVRKALDQLDVPLLRLYGYLDGLVPRKVVP-LVDELSTASHSIVFA 231
Query: 243 SDGHLPQLSSP 253
H P +S P
Sbjct: 232 GAAHAPFISHP 242
>sp|Q59093|ELH1_ACIAD 3-oxoadipate enol-lactonase 1 OS=Acinetobacter sp. (strain ADP1)
GN=pcaD PE=4 SV=2
Length = 266
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 12/239 (5%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
IV ++ GTD +W+ V L YRVV YD G G + D +TL+ D+L
Sbjct: 29 AIVFSNSLGTDHGMWQPQVAALKSQYRVVTYDTRGHGQS-----DVIENTTLQNLGEDVL 83
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDVDYYGGFEQEE 138
IL+ L I+ G S+ + I + F + + + + + + + E E
Sbjct: 84 DILDALNIEKAHFCGISMGGLTALWLGIYQAARFYSITVANSAAKIWTEDGWNARAEAVE 143
Query: 139 LDQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIALSVAQTIFQSDM 198
+ L + + S + W S D++A Q+ ++L + + + + ++D+
Sbjct: 144 ANGLADLVASTHTRWFSD----KFDYKNDNLA-QKTIQSLADTPAQGYANACRALAKADV 198
Query: 199 RQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGHLPQLSSPDIVI 257
R+ L +S+P II D + E++ Q++ + EV+ + HL + P+ I
Sbjct: 199 REKLASISIPTLIIAGSADPVTTITDGEFMQQHIQCNQ-FEVIDA-SHLSNIEQPEKFI 255
>sp|A4VQH7|RUTD_PSEU5 Putative aminoacrylate hydrolase RutD OS=Pseudomonas stutzeri
(strain A1501) GN=rutD PE=3 SV=1
Length = 265
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
+VL+ G G + W +P L DYRV++YD +G TN + ++E A++LL
Sbjct: 15 TLVLSSGLGGAAAFWLPQLPALTQDYRVLVYDQLG---TNKSPANLPAGYSIESMAVELL 71
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISG 120
+L+ L I C +GH++ ++G ++ RP L LV I+
Sbjct: 72 ELLDTLGIRRCHFIGHALGGLVGLQIALLRPQLLQSLVPINA 113
>sp|A4W922|RUTD_ENT38 Putative aminoacrylate hydrolase RutD OS=Enterobacter sp. (strain
638) GN=rutD PE=3 SV=1
Length = 270
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 102/248 (41%), Gaps = 29/248 (11%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
V+VL G G S W + L +Y+VV YD G G + + TL A +L
Sbjct: 15 VVVLIAGLGGSGSYWLPQLAALEQEYQVVCYDQRGTGN---NAGELPHGYTLGNMADELY 71
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISG-------SPRYLNDVD-- 129
L I ++GH++ A++G +I+ PD LV ++G + R +
Sbjct: 72 QALLNAGIPRFTVIGHALGALVGLQLAIAHPDAVRALVCVNGWLSLNAHTRRCFQIRERL 131
Query: 130 -YYGGFEQE-ELDQLFEAMRSNYKA-WCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIA 186
+ GG + E LF Y A W + AP +++A+ F T R +A
Sbjct: 132 LHAGGAQAWVEAQPLFL-----YPADWMAARAPRMEA--EEALALAHFQGTNNLQRRLLA 184
Query: 187 LSVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGH 246
L Q+D R V P II S DL VP V S LH L S VM GH
Sbjct: 185 LK------QADFRAQAKHVHCPVQIICSTDDLLVPSVCSTELHA-ALPGSHKTVMRQGGH 237
Query: 247 LPQLSSPD 254
++ PD
Sbjct: 238 ACNVTDPD 245
>sp|Q5QZC0|BIOH_IDILO Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Idiomarina
loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)
GN=bioH PE=3 SV=1
Length = 255
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 14/253 (5%)
Query: 9 NVKVTGSGEQVIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYS 68
+V G+G ++VL HG+G + ++W+ +VP L + +++ D G G + +
Sbjct: 4 SVTCCGTGTPIVVL-HGWGMNSNIWQPVVPALSEHFQLYCVDLPGFGDS---VWSSENDV 59
Query: 69 TLEGYALDLLAILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDV 128
+LE + ++ L L+G S+ +I +++ D L ++ SP ++
Sbjct: 60 SLESFIEQIMPALPP----RFHLLGWSLGGLIATQIALTHSDRVMSLTTVASSPHFVESN 115
Query: 129 DYYGGFEQEELDQLFEAMRSNYKAWCSGFAPLAVGGDMDSV-AVQEFSRTLFNM-RPDIA 186
D + G + + L+Q + + SN+K F + G D+ V++ + +F PD
Sbjct: 116 D-WAGIKPDILEQFQQQLDSNFKKTIERFLAIQAMGSEDAREQVKQVKQLIFTKPMPDQG 174
Query: 187 -LSVAQTIFQS-DMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSD 244
L + TI Q+ D+RQ L + VP + D VP + + L +S V +
Sbjct: 175 VLKQSLTILQTADLRQQLPNIEVPFNRFYGRLDSLVPERAIDDI-SALAPESKAVVFTKS 233
Query: 245 GHLPQLSSPDIVI 257
H P +S P+ I
Sbjct: 234 AHAPFISEPERFI 246
>sp|A8GCT3|RUTD_SERP5 Putative aminoacrylate hydrolase RutD OS=Serratia proteamaculans
(strain 568) GN=rutD PE=3 SV=1
Length = 267
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
+VL+ G G S W+ + L + +RVV+YD+ G + + S +GY++ +
Sbjct: 15 TLVLSAGLGGAGSFWQPQINALGEHFRVVVYDHFGTARS--------KGSVPDGYSMADM 66
Query: 79 A-----ILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSP 122
A +L L +D C VGH++ MIG +++ P L KLV+++G P
Sbjct: 67 ADEVAQLLRSLNVDCCYFVGHALGGMIGLQLALTHPQLVEKLVVVNGWP 115
>sp|O05235|YUGF_BACSU Uncharacterized hydrolase YugF OS=Bacillus subtilis (strain 168)
GN=yugF PE=3 SV=1
Length = 273
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 113/255 (44%), Gaps = 30/255 (11%)
Query: 16 GEQVIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYAL 75
G Q +V HGF + ++ ++P L D Y ++ D G + Y L A
Sbjct: 26 GRQTLVCVHGFLSSAFSFRKVIPLLRDKYDIIALDLPPFGQSEKSRTFIYTYQNL---AK 82
Query: 76 DLLAILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDVDYYGGFE 135
++ ILE LQ+ +LVGHS+ I A++ +P+LF+K+V++ S G +
Sbjct: 83 LVIGILEHLQVKQAVLVGHSMGGQISLSAALQKPELFSKVVLLCSS----------GYLK 132
Query: 136 QEELDQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNM-------RP--DIA 186
+ +F + + + L+ G M ++ ++L + RP D
Sbjct: 133 RSHPTIIFGTHIPYFHLYIKRW--LSKEGVMKNLLNVVHDKSLIDEEMIDGYGRPFQDEQ 190
Query: 187 LSVAQTIF----QSDMR-QILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVM 241
+ A T F + D+ + L ++ P +I +D VP+ I + LH + L +SV+ +
Sbjct: 191 IFKAMTRFIRHREGDLEPEQLKKMNKPALLIWGEEDRIVPMEIGKRLHAD-LPNSVLYSL 249
Query: 242 SSDGHLPQLSSPDIV 256
GHL P+++
Sbjct: 250 GQTGHLVPEERPELI 264
>sp|Q6LVQ7|BIOH_PHOPR Pimelyl-[acyl-carrier protein] methyl ester esterase
OS=Photobacterium profundum GN=bioH PE=3 SV=1
Length = 254
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 109/239 (45%), Gaps = 15/239 (6%)
Query: 20 IVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLLA 79
+VL HG+G + +VW+ L+P L YRV D G G ++ D + S E L
Sbjct: 16 LVLIHGWGMNGAVWQQLLPLLTPFYRVHWVDMPGYGHSH----DISADSIEEMAQL---- 67
Query: 80 ILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDVDYYGGFEQEEL 139
+L++ I S +G S+ ++ A++ P+ T+LV ++ SPR+ + + G + + L
Sbjct: 68 LLDKSPI-SATWLGWSLGGLVATQAALLAPERVTRLVTVASSPRFAAE-GTWRGIQPQVL 125
Query: 140 DQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDI---ALSVAQTIFQS 196
D + +++ F L G + + + RP ALS+ +
Sbjct: 126 DDFRRQLGDDFQLTVERFLALQAMGSPTARQDIKLLKQAVLSRPQPNPEALSIGLRLLAD 185
Query: 197 -DMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGHLPQLSSPD 254
D+R LG ++ P + D VP +++ + Q L S ++ ++ H P +S P+
Sbjct: 186 VDLRAQLGDITQPWLRLYGRLDGLVPAKVAKDMDQ-LAPQSCRQIFAAASHAPFISHPE 243
>sp|Q5X590|BIOH_LEGPA Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Legionella
pneumophila (strain Paris) GN=bioH PE=3 SV=1
Length = 239
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 23/251 (9%)
Query: 9 NVKVTGSGEQV-IVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRY 67
N+ + G+ + +VL HG+G D +W+ ++P+L Y+++L D G G T
Sbjct: 2 NIHLDKHGQGMPLVLFHGWGFDNQIWQPIIPYLKPKYQIILVDLPGFGLT--------PM 53
Query: 68 STLEGYALDLLAILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLND 127
E + +LL L D L G S+ + +I P L+ I+ SPR+++D
Sbjct: 54 MDWESFKKNLLDQLP----DKFALAGWSMGGLYATRLAIEEPARVQYLINITSSPRFISD 109
Query: 128 VDYYGGFEQEELDQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIAL 187
+D + G +E + + + F L + +F + N L
Sbjct: 110 ID-WPGVAEEVFVNFYNNLSKDINKTLKEFISLQLNK-------MKFDFKIGNPPSPEGL 161
Query: 188 SVAQTIFQS-DMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGH 246
+ I + D R+ L +++P + D PV + +N V + + H
Sbjct: 162 AFGLEILGTWDFREQLKQITIPTVYLFGRLDPITPVKTMAIMEKNYPNFKYV-LFNRAAH 220
Query: 247 LPQLSSPDIVI 257
+P LS D+ I
Sbjct: 221 MPFLSHTDLFI 231
>sp|A5IBW4|BIOH_LEGPC Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Legionella
pneumophila (strain Corby) GN=bioH PE=3 SV=1
Length = 239
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 23/251 (9%)
Query: 9 NVKVTGSGEQV-IVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRY 67
N+ + G+ + +VL HG+G D +W+ ++P+L Y+++L D G G T
Sbjct: 2 NIHLDKYGQGMPLVLFHGWGFDSQIWQPIIPYLKPKYQIILVDLPGFGLT--------PM 53
Query: 68 STLEGYALDLLAILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLND 127
E + +LL L D L G S+ + +I P L+ I+ SPR+++D
Sbjct: 54 MDWESFKKNLLDQLP----DKFALAGWSMGGLYATRLAIEEPARVQYLINITSSPRFISD 109
Query: 128 VDYYGGFEQEELDQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIAL 187
VD + G +E + + + F L + +F + N L
Sbjct: 110 VD-WPGVAEEVFVNFYNNLSKDINKTLKEFISLQLNK-------MKFDFKIGNPPSPEGL 161
Query: 188 SVAQTIFQS-DMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGH 246
+ I + D R+ L +S+P + D P + +N V + + H
Sbjct: 162 AFGLEILGTWDFREQLKQISIPTVYLFGRLDPITPAKTMAIMEKNYPNFKYV-LFNRAAH 220
Query: 247 LPQLSSPDIVI 257
+P LS D+ I
Sbjct: 221 MPFLSHTDLFI 231
>sp|C5BMZ8|BIOHC_TERTT Biotin biosynthesis bifunctional protein BioHC OS=Teredinibacter
turnerae (strain ATCC 39867 / T7901) GN=bioC PE=3 SV=1
Length = 570
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 104/258 (40%), Gaps = 34/258 (13%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLV----DDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYA 74
V+V HG+G+D+ W+ VP L+ D+ +V D G G D DF R LE
Sbjct: 34 VLVFLHGWGSDKRQWQSFVPTLLEALGDEREMVFIDLPGFG----DNSDF-RCDDLE--- 85
Query: 75 LDLLAILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYL-NDVDYYGG 133
+L L + + L+G S+ MI + P+ +L+ I+ +P ++ ND + G
Sbjct: 86 -HMLKQLARIIPGNATLIGWSLGGMIATQLASRHPEKIGRLITIATNPLFVKNDAEIAAG 144
Query: 134 -------FEQEELDQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIA 186
E+E + +A F L GD + V + + L + +
Sbjct: 145 KAPWKHAMERETFSDFVNGFADDPEATLKRFIALQSMGDSERRQVTDTLKNLLS----FS 200
Query: 187 LSVAQTIF--------QSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVV 238
QT + Q D R L ++ P I D VPV L Q L V
Sbjct: 201 AHSQQTCWANALSYLDQLDNRTALRNLTQPALHIYGKSDALVPVRAGRAL-QGLAPSHWV 259
Query: 239 EVMSSDGHLPQLSSPDIV 256
E +++ GH P +S P V
Sbjct: 260 ESITAAGHAPHISHPREV 277
>sp|D5CE35|RUTD_ENTCC Putative aminoacrylate hydrolase RutD OS=Enterobacter cloacae
subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC
13535 / NCDC 279-56) GN=rutD PE=3 SV=1
Length = 266
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 100/246 (40%), Gaps = 19/246 (7%)
Query: 16 GEQVIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYAL 75
G V+VL G G S W + L +Y+VV YD G G NPD Y TL A
Sbjct: 12 GAPVVVLIAGLGGGGSYWLPQLAALEQEYQVVCYDQRGTG-NNPDTLP-EEY-TLAQMAG 68
Query: 76 DLLAILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLN-DVDYYGGF 134
+L L + I +VGH++ A+IG ++ PD LV ++G +L + F
Sbjct: 69 ELAQALTAVGITRYCVVGHALGALIGLQLALDTPDALKALVCVNG---WLTLNAHTRRCF 125
Query: 135 EQEELDQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTL------FNMRPDIALS 188
+ E +L A +AW D + F + ++ L
Sbjct: 126 QIRE--RLLHA--GGAQAWVEAQPLFLYPADWMAARAPRLEAEEALALAHFQGKNNL-LR 180
Query: 189 VAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGHLP 248
+ ++D + ++ P H+I S DL VP V S L Q L S VM GH
Sbjct: 181 RLNALKKADFSRHAARMACPVHLICSADDLLVPSVCSSEL-QAALPHSHSVVMRQGGHAC 239
Query: 249 QLSSPD 254
++ P+
Sbjct: 240 NVTEPE 245
>sp|Q5ZVG6|BIOH_LEGPH Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1 /
ATCC 33152 / DSM 7513) GN=bioH PE=3 SV=1
Length = 239
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 41/260 (15%)
Query: 9 NVKVTGSGEQV-IVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRY 67
N+ + G+ + +VL HG+G D +W+ ++P+L Y+++L D G G T
Sbjct: 2 NIHLDKYGQGMPLVLFHGWGFDSQIWQPIIPYLKPKYQIILVDLPGFGLT--------PM 53
Query: 68 STLEGYALDLLAILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLND 127
E + +LL L D L G S+ + +I P L+ I+ SPR+++D
Sbjct: 54 MDWESFKKNLLDQLP----DKFALAGWSMGGLYATRLAIEEPARVQYLINITSSPRFISD 109
Query: 128 VDYYGGFEQEELDQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDI-- 185
+D+ G E ++F +N + D++ + S L M+ D
Sbjct: 110 IDWPGVAE-----EVFVNFYNN------------LSKDINKTLKEFISLQLNKMKCDFKI 152
Query: 186 -------ALSVAQTIFQS-DMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSV 237
L+ I + D R+ L +S+P + D PV + +N
Sbjct: 153 GNPPSPEGLAFGLEILGTWDFREQLKQISIPTVYLFGRLDPITPVKTMAIMEKNYPNFKY 212
Query: 238 VEVMSSDGHLPQLSSPDIVI 257
V + + H+P LS D+ I
Sbjct: 213 V-LFNRAAHMPFLSHTDLFI 231
>sp|B0SW62|RUTD_CAUSK Putative aminoacrylate hydrolase RutD OS=Caulobacter sp. (strain
K31) GN=rutD PE=3 SV=1
Length = 268
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 110/267 (41%), Gaps = 35/267 (13%)
Query: 2 GIVEEAHNVKVTGSGEQVIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDY 61
G+ E H S Q ++L+ G G + W + L+ +RVVLYD+ G G +
Sbjct: 8 GLYHEVHGGPA--SDRQTVILSAGLGGSGTFWAPQMQALMSRFRVVLYDHRGTGRSARTL 65
Query: 62 FDFNRYSTLEGYALDLLAILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGS 121
D + T+ D++ +++ L ++ +VGH+ G +++ PD KLV+++G
Sbjct: 66 TDPH---TVAAMGDDIVKLMDALGLERAHVVGHAAGGNAGLALALNHPDRLDKLVVVNGW 122
Query: 122 PR--------------YLNDVDYYGGFEQEELDQLFEAMRSNYKAWCSGFAPLAVGGDMD 167
R LND + L L+ A W S +
Sbjct: 123 SRPDPHIKRCFDTRLALLNDTGIAAYVHAQPL-FLYPA------DWLS--------ANNA 167
Query: 168 SVAVQEFSRTLFNMRPDIALSVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEY 227
+ +E PD+ + Q + + D+ + L + P + S D+ VP+ S
Sbjct: 168 RLEAEEVHHINGFPSPDVMRTRIQALLEFDIDEDLETIRCPVLVSASADDMLVPLSCSRR 227
Query: 228 LHQNLLVDSVVEVMSSDGHLPQLSSPD 254
L + L ++ +++ GH +++P+
Sbjct: 228 LAER-LPNATLDIAPWGGHGFTVTAPE 253
>sp|P00632|ELH2_ACIAD 3-oxoadipate enol-lactonase 2 OS=Acinetobacter sp. (strain ADP1)
GN=catD PE=1 SV=3
Length = 267
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 108/237 (45%), Gaps = 15/237 (6%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
++ ++ GT+ S+W+ + + D Y V+ YD G G ++ + ++ D++
Sbjct: 29 ALIFSNSLGTNLSMWQQQIAYFQDKYFVICYDTRGHGASSTPVGPYR----IDQLGTDVI 84
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDVDYYGGFEQEE 138
A+L+ LQI G S+ + G +I P+ F + V+++ + + + + Q
Sbjct: 85 ALLDHLQIPQATFCGISMGGLTGQWLAIHFPERFNQ-VIVANTAAKIGEAQAWQARAQLV 143
Query: 139 LDQ-LFEAMRSNYKAWCSGFAPLAVGGDMDSVA-VQEFSRTLFNMRPDIALSVAQTIFQS 196
+Q L ++ W F P G DS V++ S L + S + + ++
Sbjct: 144 REQGLTPIAQTAATRW---FTP---GFIEDSPEIVEKLSHDLAQGSAEGYASCCEALAEA 197
Query: 197 DMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGHLPQLSSP 253
D+R L +S+P +I +D V ++L ++ +V S +EV+ + H+ + P
Sbjct: 198 DVRPQLQRISIPVLVIAGAQDPVTTVADGQFLCEH-IVHSTLEVLEAS-HISNVEQP 252
>sp|Q15N09|BIOH_PSEA6 Pimelyl-[acyl-carrier protein] methyl ester esterase
OS=Pseudoalteromonas atlantica (strain T6c / ATCC
BAA-1087) GN=bioH PE=3 SV=1
Length = 258
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 108/250 (43%), Gaps = 19/250 (7%)
Query: 9 NVKVTGSGEQVIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTN---PDYFDFN 65
+ GSG ++L HG+G + VW+ + L + V D G G N P +D
Sbjct: 6 KTRTVGSGPNFVLL-HGWGVNSGVWQPIAKQLEQHFSVTYVDLPGFGENNQIMPKPYD-- 62
Query: 66 RYSTLEGYALDLLAILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYL 125
L+ A + +L E + +L G S+ ++ ++ P +L++I+ SP++
Sbjct: 63 ----LKNLAECVANVLPE----NSVLAGWSLGGLVAQHVALLEPTNVKQLILIATSPKFQ 114
Query: 126 NDVDYYGGFEQEELDQLFEAMRSNYKAWCSGF-APLAVGGDMDSVAVQEFSRTL-FNMRP 183
D + G + L + + N F A A+G D +++ ++ + +
Sbjct: 115 KGND-WAGIDPNILQAFSQQLVKNLSKTIERFLAIQAMGSDSAKTDIRKIKNSIEASPQA 173
Query: 184 DI-ALSVAQTIFQS-DMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVM 241
DI AL+ I + D+R + + +P H + D VPV + Y+ ++L + V +
Sbjct: 174 DIAALTAGLDILEHVDLRDQIAALKMPIHWMLGRLDSLVPVKLQGYVQRSLAKNHSVTIF 233
Query: 242 SSDGHLPQLS 251
H P +S
Sbjct: 234 PHASHAPFIS 243
>sp|Q5F641|BIOH_NEIG1 Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Neisseria
gonorrhoeae (strain ATCC 700825 / FA 1090) GN=bioH PE=3
SV=1
Length = 258
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 99/250 (39%), Gaps = 26/250 (10%)
Query: 11 KVTGSGEQVIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTL 70
K + + L HG+G ++ + L+P L + V D G G P F+ +
Sbjct: 8 KFMPDAAKKVYLIHGWGANRHAFDDLMPRLPATWPVSAVDLPGHGDA-PFAQPFDIEAAA 66
Query: 71 EGYALDLLAILEELQID-SCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDVD 129
+G A QID S ++G S+ ++ + PD L + + R D
Sbjct: 67 DGIAA---------QIDTSADILGWSLGGLVALYLAARHPDKVRSLCLTASFARLTAAED 117
Query: 130 YYGGFEQEELDQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIALSV 189
Y G L ++ A R++Y F L + D+ + R L PD+A
Sbjct: 118 YPEGLAAPALGKMVGAFRTDYAKHIKQFLQLQLLHTPDAAEI--IGRIL----PDLARCG 171
Query: 190 AQTIFQ--------SDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVM 241
Q +D R +L + VP ++ KD P+ + EYLH++L +V VM
Sbjct: 172 TPQALQEALDAAERADARHLLDKIDVPVLLVFGGKDAITPLRMGEYLHRHLKGSRLV-VM 230
Query: 242 SSDGHLPQLS 251
H P LS
Sbjct: 231 EKAAHAPFLS 240
>sp|Q6IE26|EPHX4_MOUSE Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=2
Length = 359
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 8 HNVKVTGSGEQVIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRY 67
H V G+ +++L HGF W+H + +YRVV D G G ++
Sbjct: 82 HYVAAGERGKPLMLLLHGFPEFWYSWRHQLREFKSEYRVVALDLRGYGESDAP------- 134
Query: 68 STLEGYALDLLA-----ILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMIS 119
+ E Y LD L IL+ L C+L+GH MI + ++ P++ KL++I+
Sbjct: 135 AHQESYKLDCLIADIKDILDSLGYSKCVLIGHDWGGMIAWLIAVCYPEMIMKLIVIN 191
>sp|Q5WW99|BIOH_LEGPL Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Legionella
pneumophila (strain Lens) GN=bioH PE=3 SV=1
Length = 239
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 101/251 (40%), Gaps = 23/251 (9%)
Query: 9 NVKVTGSGEQV-IVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRY 67
N+ + G+ + +VL HG+G D +W+ ++P+L Y+++L D G G T
Sbjct: 2 NIHLDKHGQGMPLVLFHGWGFDSQIWQPIIPYLKPKYQIILVDLPGFGLT--------PM 53
Query: 68 STLEGYALDLLAILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLND 127
E + +L L D L G S+ + +I P L+ I+ SPR+++D
Sbjct: 54 MDWESFKKNLFDQLP----DKFALAGWSMGGLYATRLAIEEPARVQYLINITSSPRFISD 109
Query: 128 VDYYGGFEQEELDQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIAL 187
+D + G +E + + + F L + +F + N L
Sbjct: 110 ID-WPGVAEEVFVNFYNNLSKDINKTLKEFISLQLNK-------MKFDFKIGNPPSPEGL 161
Query: 188 SVAQTIFQS-DMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGH 246
+ I + D R+ L +S+P + D P + +N V + + H
Sbjct: 162 AFGLEILGTWDFREQLKQISIPTVYLFGRLDPITPAKTMAIMEKNYPNFKYV-LFNRAAH 220
Query: 247 LPQLSSPDIVI 257
+P LS D+ I
Sbjct: 221 MPFLSHTDLFI 231
>sp|Q9JSN0|BIOH_NEIMA Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Neisseria
meningitidis serogroup A / serotype 4A (strain Z2491)
GN=bioH PE=3 SV=1
Length = 312
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 97/243 (39%), Gaps = 26/243 (10%)
Query: 18 QVIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDL 77
+ + L HG+G ++ V+ L+P L + V D G G + + ++
Sbjct: 15 KKVYLIHGWGANRHVFDDLMPRLPATWPVSAVDLPGHGDA----------PFAQPFDIEA 64
Query: 78 LAILEELQIDSCI-LVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDVDYYGGFEQ 136
A QID+ ++G S+ ++ + PD L + + R D DY G
Sbjct: 65 AADAVAAQIDTPADILGWSLGGLVALYLAARHPDKVRSLCLTASFARLTADEDYPEGLAA 124
Query: 137 EELDQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIALSVAQTIFQ- 195
L ++ A R++Y F L + D+ + R L PD+A + Q
Sbjct: 125 PALGKMVGAFRTDYAKHIKQFLQLQLLHTPDADGI--IGRIL----PDLARCGTPSALQE 178
Query: 196 -------SDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGHLP 248
+D R +L + VP ++ KD P + EYLH+ L +V VM H P
Sbjct: 179 ALDAAERADARHLLDKIDVPVLLVFGGKDAITPPRMGEYLHRRLKGSRLV-VMEKAAHAP 237
Query: 249 QLS 251
LS
Sbjct: 238 FLS 240
>sp|B7VHH1|BIOH_VIBSL Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Vibrio
splendidus (strain LGP32) GN=bioH PE=3 SV=1
Length = 258
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 26/232 (11%)
Query: 12 VTGSGEQVIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLE 71
V+G G +VL HG+G + +VW+ V L D+RV + D G G +
Sbjct: 9 VSGQGPD-LVLVHGWGMNGAVWQQTVDALEADFRVHVVDLPGYG------------HSAH 55
Query: 72 GYALDLLAILEELQIDS---CILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDV 128
+A DL I ++L ++ I VG S+ ++ ++ D +KLV ++ SP++
Sbjct: 56 CHAQDLEEIAQQLLAEAPKRAIWVGWSLGGLVATHMALHHSDYVSKLVTVASSPKFAAAK 115
Query: 129 D--YYGGFEQEELDQLFEAMRSNYKAWCSGFAPLAVGG------DMDSVAVQEFSRTLFN 180
+ + G + L E + +++ F L G D+ + SR L N
Sbjct: 116 EPVLWRGIQPNVLSAFTEQLVEDFQTTIERFMALQAMGSPSARQDVKQLKQAVLSRPLPN 175
Query: 181 MRPDIALSVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNL 232
PD L+ + + D+R+ L +SVP + D VP+ +++ L + L
Sbjct: 176 --PDSLLAGLKMLSDVDLREQLPEISVPMLRLYGRLDGLVPIKVAKDLGRAL 225
>sp|Q8DDU4|BIOH_VIBVU Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Vibrio
vulnificus (strain CMCP6) GN=bioH PE=3 SV=1
Length = 255
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 108/241 (44%), Gaps = 19/241 (7%)
Query: 20 IVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLLA 79
+VL HG+G + +VW+ +V L +R+ + D G G + + ++LE A LL
Sbjct: 16 LVLLHGWGMNGAVWQQVVERLELHFRLHVVDLPGYGHSAHLH-----AASLEEIAQQLL- 69
Query: 80 ILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDVDYYGGFEQEEL 139
E I VG S+ ++ ++ D +KLV ++ SP++ + + G + + L
Sbjct: 70 ---EHAPKQAIWVGWSLGGLVATHMALHHADYVSKLVTVASSPKFAAEARWR-GIQPQVL 125
Query: 140 DQLFEAMRSNYKAWCSGFAPLAVGG------DMDSVAVQEFSRTLFNMRPDIALSVAQTI 193
E + ++ F L G D+ ++ FSR N P L+ Q +
Sbjct: 126 SAFTEQLSEDFHTTVERFMALQAMGSPSARQDVKNLKQAVFSRPQPN--PQSLLAGLQML 183
Query: 194 FQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGHLPQLSSP 253
+ D+R L +++P + D VP+ +++ L + +L S + + H P ++ P
Sbjct: 184 AEVDLRDHLPHLTMPMLRLYGRLDGLVPIKVAQDL-EKVLPASEQFIFTQSSHAPFITEP 242
Query: 254 D 254
+
Sbjct: 243 E 243
>sp|B6EPQ0|BIOH_ALISL Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Aliivibrio
salmonicida (strain LFI1238) GN=bioH PE=3 SV=1
Length = 261
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 108/244 (44%), Gaps = 19/244 (7%)
Query: 20 IVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAG-TTNPDYFDFNRYSTLEGYALDLL 78
+VL HG+G + +VW+ +V L YRV D G G + DF+ +++
Sbjct: 16 LVLIHGWGMNGAVWQPIVEKLSSQYRVHTVDLSGYGYSAELGSADFD----------EMV 65
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDVDYYGGFEQEE 138
A + + +G S+ +I A+++ PD ++L+ ++ SPR+ + + G +
Sbjct: 66 AQVLAQAPEKSAWLGWSLGGLIATQAALTAPDRVSQLITVASSPRFAAEKGWR-GIKSAV 124
Query: 139 LDQLFEAMRSNYKAWCSGFAPL-AVGGDMDSVAVQEFSRTLFNMRP---DIALSVAQTIF 194
L Q E ++ ++ F L A+G +++ R + + RP AL+ TI
Sbjct: 125 LSQFTEQLKEDFTLTVERFMTLQAMGSPNAKQDIKQVKRAVLS-RPAPNPSALATGLTIL 183
Query: 195 QS-DMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGHLPQLSSP 253
D+R+ L +++P + D VP+ ++ + + S V H P +S
Sbjct: 184 ADIDLRESLSQLTMPVCRMYGRLDGLVPIKVAHDM-DAFIPHSTKVVFEQASHAPFISHS 242
Query: 254 DIVI 257
D I
Sbjct: 243 DEFI 246
>sp|A0KF11|BIOH_AERHH Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Aeromonas
hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
9240) GN=bioH PE=3 SV=1
Length = 254
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 16/254 (6%)
Query: 9 NVKVTGSGEQVIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYS 68
+V+ G G +++L HG+G + +VW +VP L YRV L D G G N YS
Sbjct: 4 SVERFGQGPDLVLL-HGWGMNGAVWHGIVPALASRYRVHLVDLPGFG--NSPLAGEVEYS 60
Query: 69 TLEGYALDLLAILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDV 128
L A ++ AIL E C L+G S+ ++ + ++S P+ L+ ++ SP ++
Sbjct: 61 -LPWLAEEVAAILPE----QCHLLGWSLGGLVASQLALSHPERLHSLITVASSPCFMAR- 114
Query: 129 DYYGGFEQEELDQLFEAMRSNYKAWCSGFAPL-AVGGDMDSVAVQEFSRTLFNMRPDIAL 187
D + G + L + + ++K F + A+G + +++ R RP L
Sbjct: 115 DEWPGIAPKVLAGFNQMLAGDFKQTIERFLAIQAMGSEHARDDIRQL-RHWLAERPAPQL 173
Query: 188 SVAQT----IFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSS 243
+ + + + D+R L +S+P + D VP L + V V+
Sbjct: 174 AALEAGLGLLAEVDLRDELTPLSLPWLRVYGRLDSLVPKASIPLLDERYPSSRSV-VLEK 232
Query: 244 DGHLPQLSSPDIVI 257
H P +S P I
Sbjct: 233 ASHAPFISHPQQFI 246
>sp|Q8IUS5|EPHX4_HUMAN Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2
Length = 362
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 8 HNVKVTGSGEQVIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRY 67
H V G+ +++L HGF W++ + +YRVV D G G T+ N
Sbjct: 84 HYVAAGERGKPLMLLLHGFPEFWYSWRYQLREFKSEYRVVALDLRGYGETDAPIHRQN-- 141
Query: 68 STLEGYALDLLAILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMIS 119
L+ D+ IL+ L C+L+GH MI + +I P++ KL++I+
Sbjct: 142 YKLDCLITDIKDILDSLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIVIN 193
>sp|Q7MPY0|BIOH_VIBVY Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Vibrio
vulnificus (strain YJ016) GN=bioH PE=3 SV=2
Length = 255
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 19/241 (7%)
Query: 20 IVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLLA 79
+VL HG+G + +VW+ +V L +R+ + D G G + ++LE A LL
Sbjct: 16 LVLLHGWGMNGAVWQQVVERLEPHFRLHVVDLPGYGHSA-----HLHAASLEEIAQQLL- 69
Query: 80 ILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDVDYYGGFEQEEL 139
E I VG S+ ++ ++ D +KLV ++ SP++ + + G + + L
Sbjct: 70 ---EHAPKQAIWVGWSLGGLVATHMALHHADYVSKLVTVASSPKFAAEARWR-GIQPQVL 125
Query: 140 DQLFEAMRSNYKAWCSGFAPLAVGG------DMDSVAVQEFSRTLFNMRPDIALSVAQTI 193
E + ++ F L G D+ ++ FSR N P L+ Q +
Sbjct: 126 SAFTEQLSEDFHITVERFMALQAMGSPSARQDVKNLKQAVFSRPQPN--PQSLLAGLQML 183
Query: 194 FQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGHLPQLSSP 253
+ D+R L +++P + D VP+ +++ L + L S + + H P ++ P
Sbjct: 184 AEVDLRDHLPHLTMPMLRLYGRLDGLVPIKVAQDL-EKALPASEQFIFTQSSHAPFITEP 242
Query: 254 D 254
+
Sbjct: 243 E 243
>sp|D5CZG9|RUTD_ECOKI Putative aminoacrylate hydrolase RutD OS=Escherichia coli O18:K1:H7
(strain IHE3034 / ExPEC) GN=rutD PE=3 SV=1
Length = 266
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 103/247 (41%), Gaps = 27/247 (10%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
V+VL G G S W + LV +Y+VV YD G G NPD + YS + A +L
Sbjct: 15 VVVLISGLGGSGSYWLPQLAVLVQEYQVVCYDQRGTG-NNPDTLAED-YSIAQ-MAAELH 71
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDVDYYGGFEQEE 138
L I+ +VGH++ A++G ++ P T LV ++G R + F+ E
Sbjct: 72 QALVAAGIERYAVVGHALGALVGMQLALDYPASVTVLVSVNGWLRI--NAHTRRCFQVRE 129
Query: 139 LDQLFEAMRSN----------YKA-WCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIAL 187
QL + + Y A W + AP D++A+ F +R AL
Sbjct: 130 --QLLHSGGAQAWVEAQPLFLYPADWMAARAPRLEA--EDALALAHFQGKNNLLRRLNAL 185
Query: 188 SVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGHL 247
A +D + P II + DL VP S LH L DS VM GH
Sbjct: 186 KRADFSHHADR------IRCPVQIICASDDLLVPTACSSELHAA-LPDSQKMVMRYGGHA 238
Query: 248 PQLSSPD 254
++ P+
Sbjct: 239 CNVTDPE 245
>sp|A1A9R4|RUTD_ECOK1 Putative aminoacrylate hydrolase RutD OS=Escherichia coli O1:K1 /
APEC GN=rutD PE=3 SV=1
Length = 266
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 103/247 (41%), Gaps = 27/247 (10%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
V+VL G G S W + LV +Y+VV YD G G NPD + YS + A +L
Sbjct: 15 VVVLISGLGGSGSYWLPQLAVLVQEYQVVCYDQRGTG-NNPDTLAED-YSIAQ-MAAELH 71
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDVDYYGGFEQEE 138
L I+ +VGH++ A++G ++ P T LV ++G R + F+ E
Sbjct: 72 QALVAAGIERYAVVGHALGALVGMQLALDYPASVTVLVSVNGWLRI--NAHTRRCFQVRE 129
Query: 139 LDQLFEAMRSN----------YKA-WCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIAL 187
QL + + Y A W + AP D++A+ F +R AL
Sbjct: 130 --QLLHSGGAQAWVEAQPLFLYPADWMAARAPRLEA--EDALALAHFQGKNNLLRRLNAL 185
Query: 188 SVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGHL 247
A +D + P II + DL VP S LH L DS VM GH
Sbjct: 186 KRADFSHHADR------IRCPVQIICASDDLLVPTACSSELHAA-LPDSQKMVMRYGGHA 238
Query: 248 PQLSSPD 254
++ P+
Sbjct: 239 CNVTDPE 245
>sp|B7MIF6|RUTD_ECO45 Putative aminoacrylate hydrolase RutD OS=Escherichia coli O45:K1
(strain S88 / ExPEC) GN=rutD PE=3 SV=1
Length = 266
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 103/247 (41%), Gaps = 27/247 (10%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
V+VL G G S W + LV +Y+VV YD G G NPD + YS + A +L
Sbjct: 15 VVVLISGLGGSGSYWLPQLAVLVQEYQVVCYDQRGTG-NNPDTLAED-YSIAQ-MAAELH 71
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDVDYYGGFEQEE 138
L I+ +VGH++ A++G ++ P T LV ++G R + F+ E
Sbjct: 72 QALVAAGIERYAVVGHALGALVGMQLALDYPASVTVLVSVNGWLRI--NAHTRRCFQVRE 129
Query: 139 LDQLFEAMRSN----------YKA-WCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIAL 187
QL + + Y A W + AP D++A+ F +R AL
Sbjct: 130 --QLLHSGGAQAWVEAQPLFLYPADWMAARAPRLEA--EDALALAHFQGKNNLLRRLNAL 185
Query: 188 SVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGHL 247
A +D + P II + DL VP S LH L DS VM GH
Sbjct: 186 KRADFSHHADR------IRCPVQIICASDDLLVPTACSSELHAA-LPDSQKMVMRYGGHA 238
Query: 248 PQLSSPD 254
++ P+
Sbjct: 239 CNVTDPE 245
>sp|B1IV88|RUTD_ECOLC Putative aminoacrylate hydrolase RutD OS=Escherichia coli (strain
ATCC 8739 / DSM 1576 / Crooks) GN=rutD PE=3 SV=1
Length = 266
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 103/248 (41%), Gaps = 29/248 (11%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
V+VL G G S W + L +Y+VV YD G G NPD + YS + A +L
Sbjct: 15 VVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTG-NNPDTLAED-YSIAQ-MAAELH 71
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPR---------YLNDVD 129
+L I+ +VGH++ A++G ++ P T LV ++G R + +
Sbjct: 72 QVLVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLVSVNGWLRINAHTRRCFQVRERL 131
Query: 130 YYGGFEQE--ELDQLFEAMRSNYKA-WCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIA 186
Y G Q E LF Y A W + AP D++A+ F +R A
Sbjct: 132 LYSGGAQAWVEAQPLFL-----YPADWMAARAPRLEA--EDALALAHFQGKNNLLRRLNA 184
Query: 187 LSVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGH 246
L A +D + P II + DL VP S LH L DS VM GH
Sbjct: 185 LKRADFSHHADR------IRCPVQIICASDDLLVPSACSSELHAA-LPDSQKMVMRYGGH 237
Query: 247 LPQLSSPD 254
++ P+
Sbjct: 238 ACNVTDPE 245
>sp|A7ZYW4|RUTD_ECOHS Putative aminoacrylate hydrolase RutD OS=Escherichia coli O9:H4
(strain HS) GN=rutD PE=3 SV=1
Length = 266
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 103/248 (41%), Gaps = 29/248 (11%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
V+VL G G S W + L +Y+VV YD G G NPD + YS + A +L
Sbjct: 15 VVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTG-NNPDTLAED-YSIAQ-MAAELH 71
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPR---------YLNDVD 129
+L I+ +VGH++ A++G ++ P T LV ++G R + +
Sbjct: 72 QVLVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLVSVNGWLRINAHTRRCFQVRERL 131
Query: 130 YYGGFEQE--ELDQLFEAMRSNYKA-WCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIA 186
Y G Q E LF Y A W + AP D++A+ F +R A
Sbjct: 132 LYSGGAQAWVEAQPLFL-----YPADWMAARAPRLEA--EDALALAHFQGKNNLLRRLNA 184
Query: 187 LSVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGH 246
L A +D + P II + DL VP S LH L DS VM GH
Sbjct: 185 LKRADFSHHADR------IRCPVQIICASDDLLVPSACSSELHAA-LPDSQKMVMRYGGH 237
Query: 247 LPQLSSPD 254
++ P+
Sbjct: 238 ACNVTDPE 245
>sp|Q1RDK8|RUTD_ECOUT Putative aminoacrylate hydrolase RutD OS=Escherichia coli (strain
UTI89 / UPEC) GN=rutD PE=3 SV=1
Length = 275
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 103/247 (41%), Gaps = 27/247 (10%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
V+VL G G S W + LV +Y+VV YD G G NPD + YS + A +L
Sbjct: 24 VVVLISGLGGSGSYWLPQLAVLVQEYQVVCYDQRGTG-NNPDTLAED-YSIAQ-MAAELH 80
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDVDYYGGFEQEE 138
L I+ +VGH++ A++G ++ P T LV ++G R + F+ E
Sbjct: 81 QALVAAGIERYAVVGHALGALVGMQLALDYPASVTVLVSVNGWLRI--NAHTRRCFQVRE 138
Query: 139 LDQLFEAMRSN----------YKA-WCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIAL 187
QL + + Y A W + AP D++A+ F +R AL
Sbjct: 139 --QLLHSGGAQAWVEAQPLFLYPADWMAARAPRLEA--EDALALAHFQGKNNLLRRLNAL 194
Query: 188 SVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGHL 247
A +D + P II + DL VP S LH L DS VM GH
Sbjct: 195 KRADFSHHADR------IRCPVQIICASDDLLVPTACSSELHAA-LPDSQKMVMRYGGHA 247
Query: 248 PQLSSPD 254
++ P+
Sbjct: 248 CNVTDPE 254
>sp|Q83LK8|RUTD_SHIFL Putative aminoacrylate hydrolase RutD OS=Shigella flexneri GN=rutD
PE=3 SV=4
Length = 266
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 102/248 (41%), Gaps = 29/248 (11%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
V+VL G G S W + L +Y+VV YD G G NPD + YS + A +L
Sbjct: 15 VVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGN-NPDTLAED-YSIAQ-MAAELH 71
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPR---------YLNDVD 129
L I+ +VGH++ A++G ++ P T LV ++G R + +
Sbjct: 72 QALVAAGIERYAVVGHALGALVGMQLALDYPASVTMLVSVNGWLRINAHTRRCFQVRERL 131
Query: 130 YYGGFEQE--ELDQLFEAMRSNYKA-WCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIA 186
Y G Q E LF Y A W + AP D++A+ F +R A
Sbjct: 132 LYSGGAQAWVEAQPLFL-----YPADWMAARAPRLEA--EDALALAHFQGKNNLLRRLNA 184
Query: 187 LSVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGH 246
L A +D + P II + DL VP S LH L DS VM GH
Sbjct: 185 LKRADFSHHADR------IRCPVQIICASDDLLVPTACSSELHAA-LPDSQKMVMPYGGH 237
Query: 247 LPQLSSPD 254
++ P+
Sbjct: 238 ACNVTDPE 245
>sp|D2AC40|RUTD_SHIF2 Putative aminoacrylate hydrolase RutD OS=Shigella flexneri serotype
X (strain 2002017) GN=rutD PE=3 SV=1
Length = 266
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 102/248 (41%), Gaps = 29/248 (11%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
V+VL G G S W + L +Y+VV YD G G NPD + YS + A +L
Sbjct: 15 VVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGN-NPDTLAED-YSIAQ-MAAELH 71
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPR---------YLNDVD 129
L I+ +VGH++ A++G ++ P T LV ++G R + +
Sbjct: 72 QALVAAGIERYAVVGHALGALVGMQLALDYPASVTMLVSVNGWLRINAHTRRCFQVRERL 131
Query: 130 YYGGFEQE--ELDQLFEAMRSNYKA-WCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIA 186
Y G Q E LF Y A W + AP D++A+ F +R A
Sbjct: 132 LYSGGAQAWVEAQPLFL-----YPADWMAARAPRLEA--EDALALAHFQGKNNLLRRLNA 184
Query: 187 LSVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGH 246
L A +D + P II + DL VP S LH L DS VM GH
Sbjct: 185 LKRADFSHHADR------IRCPVQIICASDDLLVPTACSSELHAA-LPDSQKMVMPYGGH 237
Query: 247 LPQLSSPD 254
++ P+
Sbjct: 238 ACNVTDPE 245
>sp|D3QPK2|RUTD_ECOCB Putative aminoacrylate hydrolase RutD OS=Escherichia coli O55:H7
(strain CB9615 / EPEC) GN=rutD PE=3 SV=1
Length = 266
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 102/248 (41%), Gaps = 29/248 (11%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
V+VL G G S W + L +Y+VV YD G G NPD + YS + A +L
Sbjct: 15 VVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTG-NNPDTLAED-YSITQ-MAAELH 71
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPR---------YLNDVD 129
L I+ +VGH++ A++G ++ P T LV ++G R + +
Sbjct: 72 QALVAAGIEHYAVVGHALGALVGMQLALDHPASVTVLVCVNGWLRINAHTRRCFQVRERL 131
Query: 130 YYGGFEQE--ELDQLFEAMRSNYKA-WCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIA 186
Y G Q E LF Y A W + AP D++A+ F +R A
Sbjct: 132 LYSGGAQAWVEAQPLFL-----YPADWMAARAPRLEA--EDALALAHFQGKNNLLRRLNA 184
Query: 187 LSVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGH 246
L A +D + P II + DL VP S LH L DS VM GH
Sbjct: 185 LKRADFSHHADR------IRCPVQIICASDDLLVPSACSSELHAA-LPDSQKMVMRYGGH 237
Query: 247 LPQLSSPD 254
++ P+
Sbjct: 238 ACNVTDPE 245
>sp|C6UPN1|RUTD_ECO5T Putative aminoacrylate hydrolase RutD OS=Escherichia coli O157:H7
(strain TW14359 / EHEC) GN=rutD PE=3 SV=1
Length = 266
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 102/248 (41%), Gaps = 29/248 (11%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
V+VL G G S W + L +Y+VV YD G G NPD + YS + A +L
Sbjct: 15 VVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTG-NNPDTLAED-YSITQ-MAAELH 71
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPR---------YLNDVD 129
L I+ +VGH++ A++G ++ P T LV ++G R + +
Sbjct: 72 QALVAAGIEHYAVVGHALGALVGMQLALDHPASVTVLVCVNGWLRINAHTRRCFQVRERL 131
Query: 130 YYGGFEQE--ELDQLFEAMRSNYKA-WCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIA 186
Y G Q E LF Y A W + AP D++A+ F +R A
Sbjct: 132 LYSGGAQAWVEAQPLFL-----YPADWMAARAPRLEA--EDALALAHFQGKNNLLRRLNA 184
Query: 187 LSVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGH 246
L A +D + P II + DL VP S LH L DS VM GH
Sbjct: 185 LKRADFSHHADR------IRCPVQIICASDDLLVPSACSSELHAA-LPDSQKMVMRYGGH 237
Query: 247 LPQLSSPD 254
++ P+
Sbjct: 238 ACNVTDPE 245
>sp|B5YU51|RUTD_ECO5E Putative aminoacrylate hydrolase RutD OS=Escherichia coli O157:H7
(strain EC4115 / EHEC) GN=rutD PE=3 SV=1
Length = 266
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 102/248 (41%), Gaps = 29/248 (11%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
V+VL G G S W + L +Y+VV YD G G NPD + YS + A +L
Sbjct: 15 VVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTG-NNPDTLAED-YSITQ-MAAELH 71
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPR---------YLNDVD 129
L I+ +VGH++ A++G ++ P T LV ++G R + +
Sbjct: 72 QALVAAGIEHYAVVGHALGALVGMQLALDHPASVTVLVCVNGWLRINAHTRRCFQVRERL 131
Query: 130 YYGGFEQE--ELDQLFEAMRSNYKA-WCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIA 186
Y G Q E LF Y A W + AP D++A+ F +R A
Sbjct: 132 LYSGGAQAWVEAQPLFL-----YPADWMAARAPRLEA--EDALALAHFQGKNNLLRRLNA 184
Query: 187 LSVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGH 246
L A +D + P II + DL VP S LH L DS VM GH
Sbjct: 185 LKRADFSHHADR------IRCPVQIICASDDLLVPSACSSELHAA-LPDSQKMVMRYGGH 237
Query: 247 LPQLSSPD 254
++ P+
Sbjct: 238 ACNVTDPE 245
>sp|Q8XAU7|RUTD_ECO57 Putative aminoacrylate hydrolase RutD OS=Escherichia coli O157:H7
GN=rutD PE=3 SV=1
Length = 266
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 102/248 (41%), Gaps = 29/248 (11%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
V+VL G G S W + L +Y+VV YD G G NPD + YS + A +L
Sbjct: 15 VVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTG-NNPDTLAED-YSITQ-MAAELH 71
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPR---------YLNDVD 129
L I+ +VGH++ A++G ++ P T LV ++G R + +
Sbjct: 72 QALVAAGIEHYAVVGHALGALVGMQLALDHPASVTVLVCVNGWLRINAHTRRCFQVRERL 131
Query: 130 YYGGFEQE--ELDQLFEAMRSNYKA-WCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIA 186
Y G Q E LF Y A W + AP D++A+ F +R A
Sbjct: 132 LYSGGAQAWVEAQPLFL-----YPADWMAARAPRLEA--EDALALAHFQGKNNLLRRLNA 184
Query: 187 LSVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGH 246
L A +D + P II + DL VP S LH L DS VM GH
Sbjct: 185 LKRADFSHHADR------IRCPVQIICASDDLLVPSACSSELHAA-LPDSQKMVMRYGGH 237
Query: 247 LPQLSSPD 254
++ P+
Sbjct: 238 ACNVTDPE 245
>sp|E6MWF8|BIOH_NEIMH Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Neisseria
meningitidis serogroup B / serotype 15 (strain H44/76)
GN=bioH PE=1 SV=2
Length = 258
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 26/243 (10%)
Query: 18 QVIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDL 77
+ + L HG+G ++ ++ L+P L + V D G G + + +
Sbjct: 15 KKVYLIHGWGANRHMFDDLMPRLPATWPVSAVDLPGHGDA----------PFVRPFDIAA 64
Query: 78 LAILEELQIDSCI-LVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDVDYYGGFEQ 136
A QID+ ++G S+ ++ + PD L + + R D DY G
Sbjct: 65 AADGIAAQIDAPADILGWSLGGLVALYLAARHPDKVRSLCLTASFARLTADEDYPEGLAA 124
Query: 137 EELDQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIALSVAQTIFQ- 195
L ++ A RS+Y F L + D+ + R L PD+A Q
Sbjct: 125 PALGKMVGAFRSDYAKHIKQFLQLQLLHTPDADGI--IGRIL----PDLARCGTPQALQE 178
Query: 196 -------SDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGHLP 248
+D R +L + VP ++ KD P + EYLH+ L +V VM H P
Sbjct: 179 ALDAAERADARHLLDKIDVPVLLVFGGKDAITPPRMGEYLHRRLKGSRLV-VMEKAAHAP 237
Query: 249 QLS 251
LS
Sbjct: 238 FLS 240
>sp|Q9K197|BIOH_NEIMB Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Neisseria
meningitidis serogroup B (strain MC58) GN=bioH PE=3 SV=2
Length = 258
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 26/243 (10%)
Query: 18 QVIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDL 77
+ + L HG+G ++ ++ L+P L + V D G G + + +
Sbjct: 15 KKVYLIHGWGANRHMFDDLMPRLPATWPVSAVDLPGHGDA----------PFVRPFDIAA 64
Query: 78 LAILEELQIDSCI-LVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDVDYYGGFEQ 136
A QID+ ++G S+ ++ + PD L + + R D DY G
Sbjct: 65 AADGIAAQIDAPADILGWSLGGLVALYLAARHPDKVRSLCLTASFARLTADEDYPEGLAA 124
Query: 137 EELDQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIALSVAQTIFQ- 195
L ++ A RS+Y F L + D+ + R L PD+A Q
Sbjct: 125 PALGKMVGAFRSDYAKHIKQFLQLQLLHTPDADGI--IGRIL----PDLARCGTPQALQE 178
Query: 196 -------SDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGHLP 248
+D R +L + VP ++ KD P + EYLH+ L +V VM H P
Sbjct: 179 ALDAAERADARHLLDKIDVPVLLVFGGKDAITPPRMGEYLHRRLKGSRLV-VMEKAAHAP 237
Query: 249 QLS 251
LS
Sbjct: 238 FLS 240
>sp|C8U5H1|RUTD_ECO10 Putative aminoacrylate hydrolase RutD OS=Escherichia coli O103:H2
(strain 12009 / EHEC) GN=rutD PE=2 SV=1
Length = 266
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 102/248 (41%), Gaps = 29/248 (11%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
V+VL G G S W + L +Y+VV YD G G NPD + YS + A +L
Sbjct: 15 VVVLISGLGGSGSYWLQQLAVLEQEYQVVCYDQRGTGN-NPDTLAED-YSIAQ-MAAELH 71
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPR---------YLNDVD 129
L I+ +VGH++ A++G ++ P T L+ ++G R + +
Sbjct: 72 QALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERL 131
Query: 130 YYGGFEQE--ELDQLFEAMRSNYKA-WCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIA 186
Y G Q E LF Y A W + AP D++A+ F +R A
Sbjct: 132 LYSGGAQAWVEAQPLFL-----YPADWMAARAPRLEA--EDALALAHFQGKNNLLRRLNA 184
Query: 187 LSVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGH 246
L A +D + P II + DL VP S LH L DS VM GH
Sbjct: 185 LKRADFSHHADR------IRCPVQIICASDDLLVPTACSSELHAA-LPDSQKMVMPYGGH 237
Query: 247 LPQLSSPD 254
++ P+
Sbjct: 238 ACNVTDPE 245
>sp|C6DGH6|BIOH_PECCP Pimelyl-[acyl-carrier protein] methyl ester esterase
OS=Pectobacterium carotovorum subsp. carotovorum (strain
PC1) GN=bioH PE=3 SV=1
Length = 255
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 109/248 (43%), Gaps = 15/248 (6%)
Query: 11 KVTGSGEQVIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTL 70
+ G+G +VL HG+G + VW+ ++ L +R+ + D G G + F S
Sbjct: 7 QTEGAGNTDLVLLHGWGLNAQVWQSIIARLAPHFRLHVVDLPGYGRSQ----GFGAMSL- 61
Query: 71 EGYALDLLAILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDVDY 130
D+ I+ + I +G S+ ++ + ++S P+ KL+ ++ SP + + D
Sbjct: 62 ----SDMANIVLAQAPERAIWLGWSLGGLVASQIALSAPERVDKLITVASSPCF-SAQDG 116
Query: 131 YGGFEQEELDQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIALSVA 190
+ G + + L + + +++ F L G + +++ +P ++ V
Sbjct: 117 WPGIKPDVLQGFQQQLSEDFQRTVERFLALQTLGTESARQDARLLKSVVLEQPMPSVEVL 176
Query: 191 Q----TIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGH 246
+ ++D+RQ L ++VP + D VP ++ L + L +S V+ H
Sbjct: 177 NGGLDILREADLRQPLADLAVPFLRLYGALDGLVPRKVAGLLDEQWL-NSTSVVIPKAAH 235
Query: 247 LPQLSSPD 254
P +S PD
Sbjct: 236 APFISHPD 243
>sp|B9JLT6|RUTD_AGRRK Putative aminoacrylate hydrolase RutD OS=Agrobacterium radiobacter
(strain K84 / ATCC BAA-868) GN=rutD PE=3 SV=1
Length = 262
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 33 WKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLLAILEELQIDSCILV 92
W + L D+R+V YD+ G G T D D S + A D+L I LQ+D +
Sbjct: 29 WAPQIEALATDFRIVTYDHRGTGRTGGDVPDTGGISAM---ADDVLEIAARLQLDRFDFM 85
Query: 93 GHSVSAMIGAIASISRPDLFTKLVMISG 120
GH++ +IG ++ RP+L KL++I+
Sbjct: 86 GHALGGLIGLDIALRRPELIGKLILINA 113
>sp|Q0T625|RUTD_SHIF8 Putative aminoacrylate hydrolase RutD OS=Shigella flexneri serotype
5b (strain 8401) GN=rutD PE=3 SV=1
Length = 266
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 102/248 (41%), Gaps = 29/248 (11%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
V+VL G G S W + L +Y+VV YD G G NPD + YS + A +L
Sbjct: 15 VVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTG-NNPDTLAED-YSIAQ-MAAELH 71
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPR---------YLNDVD 129
L I+ +VGH++ A++G ++ P T LV ++G R + +
Sbjct: 72 QALVAAGIERYAVVGHALGALVGMQLALDYPASVTMLVSVNGWLRINAHTRRCFQVRERL 131
Query: 130 YYGGFEQE--ELDQLFEAMRSNYKA-WCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIA 186
Y G Q E LF Y A W + AP D++A+ F +R A
Sbjct: 132 LYSGGAQAWVEAQPLFL-----YPADWMAARAPRLEA--EDALALAHFQGKNNLLRRLNA 184
Query: 187 LSVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGH 246
L A +D + P II + DL VP S LH L DS VM GH
Sbjct: 185 LKRADFSHHADR------IRRPVQIICASDDLLVPTACSSELHAA-LPDSQKMVMPYGGH 237
Query: 247 LPQLSSPD 254
++ P+
Sbjct: 238 ACNVTDPE 245
>sp|A1KRU9|BIOH_NEIMF Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Neisseria
meningitidis serogroup C / serotype 2a (strain ATCC
700532 / FAM18) GN=bioH PE=3 SV=1
Length = 256
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 97/243 (39%), Gaps = 26/243 (10%)
Query: 18 QVIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDL 77
+ + L HG+G ++ ++ L+P L + V D G G + + ++
Sbjct: 15 KKVYLIHGWGANRHMFDDLMPRLPATWPVSAVDLPGHGDA----------PFAQPFDIEA 64
Query: 78 LAILEELQIDSCI-LVGHSVSAMIGAIASISRPDLFTKLVMISGSPRYLNDVDYYGGFEQ 136
A QID+ ++G S+ ++ + PD L + + R DY G
Sbjct: 65 AADAVAAQIDTPADILGWSLGGLVALYLAARHPDKVRSLCLTASFARLTAAEDYPEGLAA 124
Query: 137 EELDQLFEAMRSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIALSVAQTIFQ- 195
L ++ A RS+Y F L + D+ + R L PD+A + Q
Sbjct: 125 PALGKMVGAFRSDYAKHIKQFLQLQLLHTPDADGI--IGRIL----PDLARCGTPSALQE 178
Query: 196 -------SDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGHLP 248
+D R +L + VP ++ KD P + EYLH++L +V VM H P
Sbjct: 179 ALDAAERADARHLLDKIDVPVLLVFGGKDAITPPRMGEYLHRHLKGSRLV-VMEKAAHAP 237
Query: 249 QLS 251
LS
Sbjct: 238 FLS 240
>sp|B6I985|RUTD_ECOSE Putative aminoacrylate hydrolase RutD OS=Escherichia coli (strain
SE11) GN=rutD PE=1 SV=1
Length = 266
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 102/248 (41%), Gaps = 29/248 (11%)
Query: 19 VIVLAHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFNRYSTLEGYALDLL 78
V+VL G G S W + L +Y+VV YD G G NPD + YS + A +L
Sbjct: 15 VVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGN-NPDTLAED-YSIAQ-MAAELH 71
Query: 79 AILEELQIDSCILVGHSVSAMIGAIASISRPDLFTKLVMISGSPR---------YLNDVD 129
L I+ +VGH++ A++G ++ P T L+ ++G R + +
Sbjct: 72 QALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERL 131
Query: 130 YYGGFEQE--ELDQLFEAMRSNYKA-WCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIA 186
Y G Q E LF Y A W + AP D++A+ F +R A
Sbjct: 132 LYSGGAQAWVEAQPLFL-----YPADWMAARAPRLEA--EDALALAHFQGKNNLLRRLNA 184
Query: 187 LSVAQTIFQSDMRQILGLVSVPCHIIQSVKDLAVPVVISEYLHQNLLVDSVVEVMSSDGH 246
L A +D + P II + DL VP S LH L DS VM GH
Sbjct: 185 LKRADFSHHADR------IRCPVQIICASDDLLVPTACSSELHAA-LPDSQKMVMPYGGH 237
Query: 247 LPQLSSPD 254
++ P+
Sbjct: 238 ACNVTDPE 245
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,623,046
Number of Sequences: 539616
Number of extensions: 4057575
Number of successful extensions: 10493
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 194
Number of HSP's that attempted gapping in prelim test: 10132
Number of HSP's gapped (non-prelim): 357
length of query: 258
length of database: 191,569,459
effective HSP length: 115
effective length of query: 143
effective length of database: 129,513,619
effective search space: 18520447517
effective search space used: 18520447517
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)