Query 046598
Match_columns 986
No_of_seqs 1050 out of 6467
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 03:39:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046598.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046598hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 4.1E-82 1.4E-86 782.5 41.6 600 12-624 4-751 (768)
2 3rgz_A Protein brassinosteroid 100.0 4.7E-63 1.6E-67 612.1 33.6 521 62-588 100-743 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 8.5E-60 2.9E-64 578.1 41.0 562 49-613 3-626 (680)
4 4eco_A Uncharacterized protein 100.0 1.7E-60 5.9E-65 575.5 23.4 501 16-591 26-605 (636)
5 3t6q_A CD180 antigen; protein- 100.0 5.3E-58 1.8E-62 554.5 38.6 514 43-590 3-564 (606)
6 4ecn_A Leucine-rich repeat pro 100.0 6.8E-58 2.3E-62 560.0 31.0 485 13-586 262-864 (876)
7 3j0a_A TOLL-like receptor 5; m 100.0 6.6E-57 2.3E-61 562.9 39.4 520 50-613 14-564 (844)
8 1ziw_A TOLL-like receptor 3; i 100.0 2.5E-56 8.6E-61 547.3 41.2 522 62-591 49-627 (680)
9 3vq2_A TLR4, TOLL-like recepto 100.0 3.2E-56 1.1E-60 539.0 34.5 512 62-591 32-563 (606)
10 3vq2_A TLR4, TOLL-like recepto 100.0 4.5E-56 1.6E-60 537.6 32.4 534 66-614 15-563 (606)
11 3t6q_A CD180 antigen; protein- 100.0 7.2E-53 2.5E-57 509.6 34.5 531 66-613 16-564 (606)
12 3j0a_A TOLL-like receptor 5; m 100.0 2.7E-52 9.1E-57 521.3 34.0 487 62-592 48-566 (844)
13 2z63_A TOLL-like receptor 4, v 100.0 1.9E-51 6.6E-56 493.6 33.5 512 62-613 28-560 (570)
14 2z81_A CD282 antigen, TOLL-lik 100.0 7.2E-52 2.5E-56 494.7 25.6 493 48-592 2-516 (549)
15 2z63_A TOLL-like receptor 4, v 100.0 1.2E-50 4.1E-55 486.7 32.9 513 67-614 12-536 (570)
16 3omv_A RAF proto-oncogene seri 100.0 3.9E-51 1.3E-55 440.6 14.4 252 687-986 35-291 (307)
17 4asz_A BDNF/NT-3 growth factor 100.0 1.8E-51 6.2E-56 443.6 10.8 259 688-986 13-280 (299)
18 4aw0_A HPDK1, 3-phosphoinositi 100.0 7.7E-51 2.6E-55 436.6 15.3 248 688-986 32-282 (311)
19 4aoj_A High affinity nerve gro 100.0 1E-50 3.5E-55 444.0 16.2 259 688-986 41-310 (329)
20 2z7x_B TOLL-like receptor 1, v 100.0 1.1E-49 3.9E-54 472.1 25.3 458 65-591 3-486 (520)
21 4g8a_A TOLL-like receptor 4; l 100.0 1.4E-48 4.7E-53 475.4 34.5 557 35-612 8-583 (635)
22 4fih_A Serine/threonine-protei 100.0 2.5E-50 8.6E-55 439.4 15.6 248 688-986 74-321 (346)
23 4b9d_A Serine/threonine-protei 100.0 8.7E-51 3E-55 443.7 11.8 250 687-986 23-274 (350)
24 4gt4_A Tyrosine-protein kinase 100.0 1.6E-50 5.5E-55 438.2 12.5 259 688-986 26-297 (308)
25 4eco_A Uncharacterized protein 100.0 9.3E-50 3.2E-54 481.7 19.7 453 86-613 81-604 (636)
26 4ecn_A Leucine-rich repeat pro 100.0 2.6E-49 9E-54 484.2 23.3 461 86-613 323-870 (876)
27 3fpq_A Serine/threonine-protei 100.0 7E-50 2.4E-54 427.7 15.4 251 689-986 26-280 (290)
28 4g8a_A TOLL-like receptor 4; l 100.0 3.7E-48 1.3E-52 471.6 31.5 523 53-591 34-585 (635)
29 2z81_A CD282 antigen, TOLL-lik 100.0 4.6E-49 1.6E-53 470.4 22.2 481 49-566 11-514 (549)
30 4g3f_A NF-kappa-beta-inducing 100.0 1.3E-49 4.3E-54 432.6 12.4 247 687-986 57-307 (336)
31 4fie_A Serine/threonine-protei 100.0 3.9E-49 1.3E-53 440.6 16.4 249 687-986 150-398 (423)
32 3hyh_A Carbon catabolite-derep 100.0 5.4E-49 1.8E-53 416.9 14.2 245 687-986 12-260 (275)
33 2z7x_B TOLL-like receptor 1, v 100.0 1E-47 3.4E-52 455.4 24.0 458 89-612 3-484 (520)
34 4ase_A Vascular endothelial gr 100.0 8.4E-49 2.9E-53 432.2 12.3 263 686-986 62-338 (353)
35 3hmm_A TGF-beta receptor type- 100.0 2.5E-48 8.7E-53 422.5 15.4 269 688-986 3-288 (303)
36 3ubd_A Ribosomal protein S6 ki 100.0 9.9E-49 3.4E-53 420.6 11.0 244 688-984 24-272 (304)
37 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.2E-46 4E-51 450.0 25.7 459 65-592 34-516 (562)
38 4g31_A Eukaryotic translation 100.0 2E-47 6.8E-52 413.0 14.8 255 688-986 5-277 (299)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.4E-45 8.1E-50 438.7 23.0 460 88-612 33-513 (562)
40 4b99_A Mitogen-activated prote 100.0 6.7E-46 2.3E-50 416.5 14.9 207 687-907 53-265 (398)
41 1ogq_A PGIP-2, polygalacturona 100.0 2.4E-44 8.2E-49 395.5 21.9 294 15-313 1-302 (313)
42 4f9c_A Cell division cycle 7-r 100.0 4.1E-45 1.4E-49 406.0 15.9 200 685-907 18-249 (361)
43 3v47_A TOLL-like receptor 5B a 100.0 2.6E-43 8.8E-48 410.3 24.3 377 86-593 30-415 (455)
44 1jl5_A Outer protein YOPM; leu 100.0 6.5E-43 2.2E-47 403.2 24.7 387 84-587 9-410 (454)
45 3v5w_A G-protein coupled recep 100.0 3.2E-43 1.1E-47 409.6 18.8 245 687-983 188-439 (689)
46 3uto_A Twitchin; kinase, muscl 100.0 2.9E-43 9.8E-48 415.3 16.9 250 687-985 156-407 (573)
47 1jl5_A Outer protein YOPM; leu 100.0 9.5E-42 3.3E-46 393.5 22.3 403 103-609 5-409 (454)
48 3fxz_A Serine/threonine-protei 100.0 1.4E-41 4.7E-46 371.1 17.3 249 687-986 19-267 (297)
49 2qkw_B Protein kinase; three-h 100.0 1.5E-41 5E-46 375.9 17.7 275 679-986 30-306 (321)
50 3uim_A Brassinosteroid insensi 100.0 3E-41 1E-45 374.4 17.1 283 673-986 15-302 (326)
51 3v47_A TOLL-like receptor 5B a 100.0 7.7E-41 2.6E-45 389.4 20.3 384 48-492 6-410 (455)
52 3s95_A LIMK-1, LIM domain kina 100.0 2.7E-41 9.3E-46 371.8 13.4 253 687-986 9-273 (310)
53 3tki_A Serine/threonine-protei 100.0 5.6E-41 1.9E-45 370.6 14.9 252 687-986 6-259 (323)
54 3fe3_A MAP/microtubule affinit 100.0 6.1E-41 2.1E-45 370.3 15.0 247 686-986 13-262 (328)
55 3zgw_A Maternal embryonic leuc 100.0 6.9E-41 2.3E-45 371.8 13.6 249 686-986 8-258 (347)
56 2c30_A Serine/threonine-protei 100.0 4.3E-40 1.5E-44 363.4 19.8 260 676-986 23-292 (321)
57 3soc_A Activin receptor type-2 100.0 1.4E-40 4.7E-45 367.9 14.9 275 686-986 22-309 (322)
58 2yab_A Death-associated protei 100.0 5.9E-40 2E-44 366.7 19.6 251 686-986 10-270 (361)
59 2nru_A Interleukin-1 receptor- 100.0 2E-39 6.8E-44 356.5 22.5 275 674-986 11-297 (307)
60 1tki_A Titin; serine kinase, m 100.0 4.6E-40 1.6E-44 362.8 17.3 250 687-986 4-255 (321)
61 3bz5_A Internalin-J, INLJ; leu 100.0 1.6E-39 5.4E-44 375.3 22.5 358 80-592 36-393 (457)
62 1o6l_A RAC-beta serine/threoni 100.0 4E-40 1.4E-44 364.6 16.4 200 687-906 4-206 (337)
63 2psq_A Fibroblast growth facto 100.0 4.8E-40 1.6E-44 370.1 16.5 260 687-986 80-355 (370)
64 2pmi_A Negative RE, cyclin-dep 100.0 1E-39 3.5E-44 360.0 17.0 207 687-908 4-212 (317)
65 1xjd_A Protein kinase C, theta 100.0 8.4E-40 2.9E-44 363.0 16.4 249 685-986 14-267 (345)
66 3q4u_A Activin receptor type-1 100.0 1.2E-39 4.1E-44 357.2 17.3 260 686-986 6-293 (301)
67 3lb7_A RAF proto-oncogene seri 100.0 5.6E-40 1.9E-44 360.0 14.6 252 687-986 35-291 (307)
68 2y0a_A Death-associated protei 100.0 1.7E-39 5.8E-44 359.5 18.5 250 687-986 10-269 (326)
69 3cbl_A C-FES, proto-oncogene t 100.0 1.7E-40 5.9E-45 375.2 10.6 251 687-986 113-365 (377)
70 4eqm_A Protein kinase; transfe 100.0 8.3E-40 2.8E-44 356.6 15.6 249 687-982 10-261 (294)
71 3kul_A Ephrin type-A receptor 100.0 4.3E-40 1.5E-44 364.1 13.0 251 687-986 48-304 (325)
72 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.4E-40 1.2E-44 367.7 12.3 245 686-983 21-269 (353)
73 1kob_A Twitchin; kinase, intra 100.0 1.7E-39 5.7E-44 366.3 18.0 251 687-986 50-302 (387)
74 4fr4_A YANK1, serine/threonine 100.0 1.4E-39 4.9E-44 365.4 17.2 246 687-983 14-265 (384)
75 2bdw_A Hypothetical protein K1 100.0 1.2E-39 4.3E-44 365.3 16.6 251 686-986 27-282 (362)
76 3ugc_A Tyrosine-protein kinase 100.0 4.5E-40 1.5E-44 359.4 12.6 267 687-986 9-282 (295)
77 4dc2_A Protein kinase C IOTA t 100.0 1.4E-39 4.8E-44 366.7 16.8 254 687-984 51-308 (396)
78 3c0i_A Peripheral plasma membr 100.0 9E-40 3.1E-44 365.5 14.8 254 687-986 23-284 (351)
79 3soa_A Calcium/calmodulin-depe 100.0 1.6E-39 5.4E-44 372.8 16.8 253 685-986 8-265 (444)
80 3o0g_A Cell division protein k 100.0 1.4E-39 4.7E-44 354.8 15.2 274 688-986 2-280 (292)
81 3h4j_B AMPK kdaid, SNF1-like p 100.0 7.7E-40 2.6E-44 361.9 13.0 245 687-986 8-256 (336)
82 2zv2_A Calcium/calmodulin-depe 100.0 1.5E-39 5E-44 355.8 15.1 250 687-986 12-290 (298)
83 3p86_A Serine/threonine-protei 100.0 1.1E-39 3.6E-44 358.0 13.7 251 686-986 35-289 (309)
84 1fot_A TPK1 delta, CAMP-depend 100.0 2.8E-39 9.4E-44 355.4 16.6 198 687-907 5-205 (318)
85 3kn6_A Ribosomal protein S6 ki 100.0 6.4E-39 2.2E-43 354.5 19.6 249 693-986 16-268 (325)
86 4euu_A Serine/threonine-protei 100.0 2.6E-39 8.9E-44 357.4 16.2 278 687-986 8-300 (319)
87 3ork_A Serine/threonine protei 100.0 5E-40 1.7E-44 361.7 10.1 257 686-985 10-270 (311)
88 3a8x_A Protein kinase C IOTA t 100.0 4.9E-39 1.7E-43 357.7 18.2 254 687-984 8-265 (345)
89 3op5_A Serine/threonine-protei 100.0 1.1E-39 3.7E-44 367.3 12.8 265 686-986 33-320 (364)
90 2yex_A Serine/threonine-protei 100.0 4.2E-39 1.4E-43 348.1 16.9 253 686-986 5-259 (276)
91 3vhe_A Vascular endothelial gr 100.0 7.1E-40 2.4E-44 368.6 11.2 269 680-986 14-346 (359)
92 2i0e_A Protein kinase C-beta I 100.0 4.4E-39 1.5E-43 358.4 17.4 245 686-983 18-266 (353)
93 3niz_A Rhodanese family protei 100.0 3.3E-39 1.1E-43 354.7 16.1 275 685-986 18-298 (311)
94 3oja_B Anopheles plasmodium-re 100.0 1.9E-38 6.4E-43 380.9 23.8 387 35-623 4-394 (597)
95 3l9p_A Anaplastic lymphoma kin 100.0 5.2E-40 1.8E-44 369.6 9.6 257 687-986 70-336 (367)
96 2qol_A Ephrin receptor; recept 100.0 1.1E-39 3.7E-44 367.3 12.2 251 687-986 44-300 (373)
97 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.5E-39 1.2E-43 359.4 16.1 240 687-982 40-282 (350)
98 3ttj_A Mitogen-activated prote 100.0 7.2E-39 2.4E-43 370.6 19.0 203 686-907 60-265 (464)
99 3n9x_A Phosphotransferase; mal 100.0 3E-39 1E-43 371.6 15.7 207 686-906 24-253 (432)
100 3qd2_B Eukaryotic translation 100.0 6.9E-39 2.4E-43 356.4 18.1 257 686-986 4-323 (332)
101 4aw2_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43 368.6 15.3 208 682-907 68-283 (437)
102 3rp9_A Mitogen-activated prote 100.0 1.9E-39 6.6E-44 377.0 13.7 201 687-901 52-280 (458)
103 3v8s_A RHO-associated protein 100.0 6E-40 2.1E-44 371.8 8.9 206 682-907 63-275 (410)
104 2w4o_A Calcium/calmodulin-depe 100.0 2.6E-39 9E-44 361.2 13.7 250 686-986 51-303 (349)
105 3qup_A Tyrosine-protein kinase 100.0 1.5E-39 5.1E-44 360.2 11.6 262 686-986 21-289 (323)
106 2izr_A Casein kinase I isoform 100.0 2.9E-39 9.9E-44 358.8 13.7 254 687-986 8-272 (330)
107 4agu_A Cyclin-dependent kinase 100.0 3.6E-39 1.2E-43 355.1 14.4 275 687-986 2-282 (311)
108 3poz_A Epidermal growth factor 100.0 1.2E-39 4.1E-44 361.1 10.5 250 687-986 14-269 (327)
109 3f3z_A Calcium/calmodulin-depe 100.0 1E-38 3.6E-43 345.1 17.6 250 686-986 7-259 (277)
110 3sxs_A Cytoplasmic tyrosine-pr 100.0 4E-39 1.4E-43 346.5 14.1 248 687-986 7-255 (268)
111 4hcu_A Tyrosine-protein kinase 100.0 3.1E-39 1E-43 347.6 13.1 248 687-986 9-257 (269)
112 3gni_B Strad alpha; kinase fol 100.0 5.8E-39 2E-43 365.0 16.0 207 686-908 23-240 (389)
113 1o6v_A Internalin A; bacterial 100.0 2.6E-37 8.8E-42 360.0 30.2 350 107-590 43-392 (466)
114 3llt_A Serine/threonine kinase 100.0 5.1E-39 1.8E-43 361.6 15.3 210 675-907 22-261 (360)
115 2x4f_A Myosin light chain kina 100.0 6.9E-39 2.4E-43 360.5 15.8 245 693-986 94-340 (373)
116 3uc3_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43 362.0 13.0 252 686-986 18-272 (361)
117 2ivs_A Proto-oncogene tyrosine 100.0 5.3E-39 1.8E-43 354.4 14.5 260 687-986 22-302 (314)
118 3og7_A AKAP9-BRAF fusion prote 100.0 2.7E-39 9.4E-44 351.8 12.0 253 686-986 22-279 (289)
119 1csn_A Casein kinase-1; phosph 100.0 6E-39 2.1E-43 351.0 14.6 255 687-986 9-274 (298)
120 1o6v_A Internalin A; bacterial 100.0 1.9E-37 6.6E-42 361.1 28.2 345 84-538 44-388 (466)
121 4f0f_A Serine/threonine-protei 100.0 9.4E-39 3.2E-43 347.4 16.0 247 687-986 18-280 (287)
122 3g33_A Cell division protein k 100.0 5.1E-39 1.7E-43 353.3 13.8 280 686-986 7-294 (308)
123 2r5t_A Serine/threonine-protei 100.0 7.1E-39 2.4E-43 359.3 15.2 246 687-985 37-286 (373)
124 2y94_A 5'-AMP-activated protei 100.0 8.9E-39 3.1E-43 368.7 16.4 246 687-986 15-264 (476)
125 2a2a_A Death-associated protei 100.0 1.6E-38 5.6E-43 351.3 17.7 251 686-986 10-270 (321)
126 3bz5_A Internalin-J, INLJ; leu 100.0 4.5E-38 1.5E-42 363.2 22.1 208 62-295 42-249 (457)
127 3o6n_A APL1; leucine-rich repe 100.0 3.6E-38 1.2E-42 358.7 20.9 377 39-614 2-379 (390)
128 2id5_A Lingo-1, leucine rich r 100.0 4.2E-38 1.4E-42 368.4 22.1 137 478-614 225-361 (477)
129 3oz6_A Mitogen-activated prote 100.0 6E-39 2.1E-43 364.5 14.5 205 685-907 6-233 (388)
130 1ob3_A PFPK5, cell division co 100.0 6.8E-39 2.3E-43 348.5 14.2 200 688-908 2-204 (288)
131 3hko_A Calcium/calmodulin-depe 100.0 7.4E-39 2.5E-43 358.2 14.6 268 682-986 20-328 (345)
132 3p1a_A MYT1 kinase, membrane-a 100.0 6.2E-39 2.1E-43 352.7 13.8 244 687-986 56-302 (311)
133 2vd5_A DMPK protein; serine/th 100.0 3.3E-39 1.1E-43 366.0 11.8 208 682-907 55-272 (412)
134 1luf_A Muscle-specific tyrosin 100.0 2.9E-39 9.9E-44 361.2 11.2 262 685-986 44-326 (343)
135 3qyz_A Mitogen-activated prote 100.0 4.8E-39 1.6E-43 362.0 12.7 286 684-986 23-311 (364)
136 3kk8_A Calcium/calmodulin depe 100.0 1.8E-38 6.1E-43 344.7 16.5 250 687-986 5-259 (284)
137 3cok_A Serine/threonine-protei 100.0 9.8E-39 3.4E-43 345.5 14.3 248 687-986 10-260 (278)
138 3dls_A PAS domain-containing s 100.0 6.2E-39 2.1E-43 356.0 13.0 241 686-986 22-272 (335)
139 3lxl_A Tyrosine-protein kinase 100.0 3E-39 1E-43 358.2 10.5 268 687-986 22-294 (327)
140 1t4h_A Serine/threonine-protei 100.0 1.5E-38 5.1E-43 346.4 15.7 250 688-986 26-280 (290)
141 2ac3_A MAP kinase-interacting 100.0 1E-38 3.5E-43 352.4 14.6 268 687-986 11-293 (316)
142 3kex_A Receptor tyrosine-prote 100.0 2.6E-39 8.8E-44 358.3 9.7 250 687-986 12-267 (325)
143 1rjb_A FL cytokine receptor; k 100.0 6.1E-39 2.1E-43 358.7 12.9 262 686-986 43-325 (344)
144 1nxk_A MAP kinase-activated pr 100.0 2.6E-38 8.8E-43 359.4 17.9 253 687-986 60-319 (400)
145 2eue_A Carbon catabolite derep 100.0 1.1E-38 3.7E-43 344.6 14.0 245 687-986 12-260 (275)
146 4aaa_A Cyclin-dependent kinase 100.0 1.3E-38 4.3E-43 353.8 14.7 276 687-986 24-304 (331)
147 3c4z_A Rhodopsin kinase; Ser/T 100.0 4E-38 1.4E-42 367.0 19.5 253 687-984 184-439 (543)
148 3tt0_A Basic fibroblast growth 100.0 1E-38 3.5E-43 361.5 14.1 260 687-986 68-343 (382)
149 2v62_A Serine/threonine-protei 100.0 1.1E-38 3.9E-43 356.1 14.3 263 687-986 36-319 (345)
150 3dbq_A Dual specificity protei 100.0 4.5E-39 1.5E-43 359.1 10.7 249 687-986 8-271 (343)
151 3gen_A Tyrosine-protein kinase 100.0 1.1E-38 3.9E-43 346.0 13.6 249 686-986 22-271 (283)
152 3i6u_A CDS1, serine/threonine- 100.0 2.1E-38 7.3E-43 362.7 16.5 252 685-986 132-397 (419)
153 3a62_A Ribosomal protein S6 ki 100.0 2.1E-38 7.1E-43 350.9 15.8 245 687-984 16-267 (327)
154 1t46_A HOMO sapiens V-KIT hard 100.0 9E-39 3.1E-43 352.3 12.8 262 686-986 21-298 (313)
155 3brb_A Proto-oncogene tyrosine 100.0 1.5E-38 5.1E-43 350.5 14.4 263 685-986 31-299 (313)
156 1opk_A P150, C-ABL, proto-onco 100.0 1E-38 3.5E-43 373.0 13.8 250 687-986 219-469 (495)
157 4hgt_A Casein kinase I isoform 100.0 1.9E-38 6.5E-43 346.7 14.9 256 685-986 6-271 (296)
158 2buj_A Serine/threonine-protei 100.0 8.4E-39 2.9E-43 353.2 12.2 260 687-986 28-297 (317)
159 2rku_A Serine/threonine-protei 100.0 3.8E-38 1.3E-42 343.9 17.1 248 686-986 13-263 (294)
160 3uzp_A CKI-delta, CKID, casein 100.0 2.7E-38 9.3E-43 345.5 15.6 255 686-986 7-271 (296)
161 1cm8_A Phosphorylated MAP kina 100.0 1.1E-38 3.7E-43 358.6 12.5 202 686-907 23-228 (367)
162 3fdn_A Serine/threonine-protei 100.0 1.7E-38 5.7E-43 343.9 13.5 246 686-986 7-255 (279)
163 3mtl_A Cell division protein k 100.0 4E-39 1.4E-43 356.5 8.7 273 688-986 2-279 (324)
164 2zmd_A Dual specificity protei 100.0 9.6E-39 3.3E-43 361.9 12.0 248 688-986 56-318 (390)
165 3is5_A Calcium-dependent prote 100.0 1.1E-38 3.7E-43 346.3 11.9 252 687-986 21-276 (285)
166 3lzb_A Epidermal growth factor 100.0 7.9E-39 2.7E-43 354.3 11.0 250 687-986 14-269 (327)
167 1mp8_A Focal adhesion kinase 1 100.0 9.4E-39 3.2E-43 346.2 11.3 250 686-986 13-267 (281)
168 2owb_A Serine/threonine-protei 100.0 4E-38 1.4E-42 350.1 16.7 248 686-986 39-289 (335)
169 2qr7_A Ribosomal protein S6 ki 100.0 1.1E-38 3.7E-43 354.5 11.9 251 686-986 20-275 (342)
170 1k9a_A Carboxyl-terminal SRC k 100.0 2.9E-38 9.9E-43 365.2 15.9 244 687-986 192-436 (450)
171 4ejn_A RAC-alpha serine/threon 100.0 7.6E-39 2.6E-43 370.3 11.0 201 687-907 147-351 (446)
172 3lm5_A Serine/threonine-protei 100.0 3.2E-38 1.1E-42 349.7 15.5 264 675-986 15-285 (327)
173 1u5q_A Serine/threonine protei 100.0 1.4E-38 4.8E-43 354.7 12.7 245 687-986 53-303 (348)
174 3g2f_A Bone morphogenetic prot 100.0 1.3E-38 4.6E-43 354.7 12.4 277 687-986 12-309 (336)
175 3bhy_A Death-associated protei 100.0 5E-38 1.7E-42 340.9 16.5 250 687-986 4-263 (283)
176 2acx_A G protein-coupled recep 100.0 3E-38 1E-42 368.5 15.6 249 687-983 183-434 (576)
177 4e5w_A Tyrosine-protein kinase 100.0 6.9E-39 2.3E-43 351.3 9.6 264 687-986 20-293 (302)
178 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.1E-38 3.9E-43 353.6 11.4 277 684-986 30-316 (329)
179 1p4o_A Insulin-like growth fac 100.0 3.7E-39 1.3E-43 356.9 7.5 266 681-986 18-290 (322)
180 1qcf_A Haematopoetic cell kina 100.0 1.1E-38 3.6E-43 369.5 11.4 249 686-986 186-435 (454)
181 2eva_A TAK1 kinase - TAB1 chim 100.0 2.6E-38 8.8E-43 347.1 13.9 247 687-986 7-254 (307)
182 3c1x_A Hepatocyte growth facto 100.0 1.2E-38 4.1E-43 358.3 11.4 250 689-986 90-346 (373)
183 2fst_X Mitogen-activated prote 100.0 1E-38 3.5E-43 358.3 10.6 202 686-907 27-232 (367)
184 4fvq_A Tyrosine-protein kinase 100.0 1.1E-38 3.9E-43 347.1 10.7 244 687-986 7-266 (289)
185 3nsz_A CK II alpha, casein kin 100.0 6.6E-38 2.3E-42 348.1 17.0 275 687-986 35-317 (330)
186 3mi9_A Cell division protein k 100.0 7.2E-38 2.5E-42 350.8 17.2 283 687-986 16-309 (351)
187 2pvf_A Fibroblast growth facto 100.0 2.9E-38 9.9E-43 351.4 13.9 260 687-986 34-309 (334)
188 2jam_A Calcium/calmodulin-depe 100.0 2.9E-38 1E-42 346.5 13.7 250 686-986 7-259 (304)
189 2xir_A Vascular endothelial gr 100.0 1.5E-38 5.1E-43 351.1 11.4 268 681-986 20-301 (316)
190 3dtc_A Mitogen-activated prote 100.0 1.8E-38 6.1E-43 342.1 11.6 244 687-986 6-264 (271)
191 3a7i_A MST3 kinase, serine/thr 100.0 6.9E-38 2.4E-42 343.4 16.3 247 687-986 21-268 (303)
192 3kfa_A Tyrosine-protein kinase 100.0 2.6E-38 8.8E-43 344.2 12.7 251 686-986 11-262 (288)
193 2clq_A Mitogen-activated prote 100.0 6.5E-38 2.2E-42 342.3 15.6 251 689-986 23-276 (295)
194 3mdy_A Bone morphogenetic prot 100.0 2E-37 7E-42 345.3 19.8 267 682-986 31-322 (337)
195 2xrw_A Mitogen-activated prote 100.0 1.2E-37 4.1E-42 351.2 17.9 202 687-907 24-228 (371)
196 3pg1_A Mitogen-activated prote 100.0 4E-38 1.4E-42 354.7 13.9 278 680-986 14-314 (362)
197 2w5a_A Serine/threonine-protei 100.0 1.6E-38 5.6E-43 344.0 10.3 254 687-986 5-265 (279)
198 4eut_A Serine/threonine-protei 100.0 4.3E-38 1.5E-42 358.0 13.9 278 687-986 8-300 (396)
199 2vgo_A Serine/threonine-protei 100.0 7.4E-38 2.5E-42 339.7 15.1 245 687-986 13-260 (284)
200 2j7t_A Serine/threonine-protei 100.0 2E-38 6.8E-43 347.7 10.6 252 686-986 17-273 (302)
201 2i1m_A Macrophage colony-stimu 100.0 2E-38 7E-43 352.7 10.7 264 684-986 42-317 (333)
202 3f66_A Hepatocyte growth facto 100.0 4.9E-38 1.7E-42 343.8 13.4 252 687-986 24-282 (298)
203 3eqc_A Dual specificity mitoge 100.0 3.7E-38 1.3E-42 354.6 12.7 199 687-907 32-232 (360)
204 2y7j_A Phosphorylase B kinase 100.0 1.2E-37 4.2E-42 349.9 16.9 255 682-986 88-357 (365)
205 2ycf_A Serine/threonine-protei 100.0 1.3E-37 4.5E-42 344.2 16.3 251 686-986 8-272 (322)
206 2h34_A Serine/threonine-protei 100.0 3.8E-38 1.3E-42 346.2 11.6 251 686-985 32-286 (309)
207 3t9t_A Tyrosine-protein kinase 100.0 4.7E-38 1.6E-42 338.0 11.9 248 687-986 7-255 (267)
208 3pfq_A PKC-B, PKC-beta, protei 100.0 1.7E-37 5.8E-42 374.5 18.1 245 686-983 339-587 (674)
209 1ua2_A CAK, cell division prot 100.0 6.8E-38 2.3E-42 350.0 13.6 278 684-986 6-289 (346)
210 1mqb_A Ephrin type-A receptor 100.0 5.4E-38 1.8E-42 348.7 12.6 251 687-986 43-300 (333)
211 3byv_A Rhoptry kinase; malaria 100.0 7.3E-39 2.5E-43 362.2 5.7 250 687-986 72-357 (377)
212 3com_A Serine/threonine-protei 100.0 1.3E-37 4.4E-42 343.2 15.5 250 686-986 27-276 (314)
213 3kmu_A ILK, integrin-linked ki 100.0 6.4E-38 2.2E-42 337.8 12.7 246 687-986 9-261 (271)
214 3q5i_A Protein kinase; CDPK, m 100.0 1.9E-37 6.5E-42 364.2 17.8 250 686-986 34-299 (504)
215 3mwu_A Calmodulin-domain prote 100.0 9.7E-38 3.3E-42 365.2 15.1 250 686-986 20-274 (486)
216 2wqm_A Serine/threonine-protei 100.0 6.6E-38 2.3E-42 344.8 12.8 256 686-986 30-288 (310)
217 3gxj_A TGF-beta receptor type- 100.0 2.6E-39 9E-44 354.8 1.6 267 687-986 2-288 (303)
218 3e7e_A HBUB1, BUB1A, mitotic c 100.0 6.5E-38 2.2E-42 353.0 13.0 207 685-907 62-287 (365)
219 3lxp_A Non-receptor tyrosine-p 100.0 2.4E-38 8.2E-43 349.3 9.3 259 688-986 30-301 (318)
220 1x8b_A WEE1HU, WEE1-like prote 100.0 1.1E-37 3.6E-42 339.4 14.2 246 686-986 9-277 (289)
221 2yfx_A Tyrosine-protein kinase 100.0 4.2E-38 1.4E-42 349.1 11.2 258 686-986 28-295 (327)
222 1u59_A Tyrosine-protein kinase 100.0 9.5E-38 3.3E-42 339.4 13.8 250 687-986 8-263 (287)
223 3pls_A Macrophage-stimulating 100.0 1.4E-37 4.6E-42 340.3 15.0 251 689-986 22-278 (298)
224 2w1i_A JAK2; chromosomal rearr 100.0 2.8E-38 9.6E-43 350.2 9.7 268 687-986 40-313 (326)
225 1b6c_B TGF-B superfamily recep 100.0 3.7E-37 1.3E-41 344.0 18.8 268 678-986 32-327 (342)
226 3lij_A Calcium/calmodulin depe 100.0 1.5E-37 5.1E-42 364.2 16.2 249 687-986 36-289 (494)
227 3nyv_A Calmodulin-domain prote 100.0 7.9E-38 2.7E-42 366.2 13.8 250 686-986 24-279 (484)
228 2wtk_C Serine/threonine-protei 100.0 2.6E-37 8.8E-42 339.3 17.0 253 686-986 3-261 (305)
229 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.1E-38 1.1E-42 365.1 10.1 249 686-986 182-431 (452)
230 3cc6_A Protein tyrosine kinase 100.0 5.5E-38 1.9E-42 340.2 11.5 250 686-986 10-264 (281)
231 1xbb_A Tyrosine-protein kinase 100.0 4.1E-38 1.4E-42 343.1 10.1 250 686-986 14-270 (291)
232 2h6d_A 5'-AMP-activated protei 100.0 1.3E-37 4.3E-42 336.5 13.8 246 687-986 10-259 (276)
233 3eb0_A Putative uncharacterize 100.0 1.3E-37 4.4E-42 352.7 14.5 282 684-986 3-319 (383)
234 2b9h_A MAP kinase FUS3, mitoge 100.0 8.6E-38 2.9E-42 350.7 12.8 207 686-907 9-225 (353)
235 2x7f_A TRAF2 and NCK-interacti 100.0 5.2E-38 1.8E-42 348.3 10.7 267 675-986 11-284 (326)
236 2i6l_A Mitogen-activated prote 100.0 2.2E-37 7.5E-42 342.4 15.5 282 687-986 10-303 (320)
237 3fme_A Dual specificity mitoge 100.0 8.4E-38 2.9E-42 340.5 11.7 253 687-986 6-264 (290)
238 3sv0_A Casein kinase I-like; t 100.0 2E-37 6.7E-42 358.2 15.5 254 687-986 6-269 (483)
239 1phk_A Phosphorylase kinase; g 100.0 3.4E-37 1.2E-41 337.1 16.3 252 685-986 14-281 (298)
240 2vwi_A Serine/threonine-protei 100.0 4.6E-38 1.6E-42 344.9 9.2 267 686-986 13-285 (303)
241 3an0_A Dual specificity mitoge 100.0 1.3E-37 4.3E-42 347.3 12.8 254 686-986 49-308 (340)
242 4exu_A Mitogen-activated prote 100.0 1.2E-37 4.2E-42 351.1 12.8 201 686-907 40-244 (371)
243 3kvw_A DYRK2, dual specificity 100.0 3.6E-37 1.2E-41 353.4 16.6 200 686-908 95-302 (429)
244 3ll6_A Cyclin G-associated kin 100.0 1.1E-37 3.7E-42 347.6 11.7 255 686-986 26-299 (337)
245 1qpc_A LCK kinase; alpha beta 100.0 1.8E-37 6.3E-42 335.7 13.1 248 687-986 12-260 (279)
246 2a19_B Interferon-induced, dou 100.0 1.4E-37 4.8E-42 337.6 12.1 246 686-986 9-265 (284)
247 3e3p_A Protein kinase, putativ 100.0 5E-37 1.7E-41 345.5 16.7 290 681-986 16-312 (360)
248 3q60_A ROP5B; pseudokinase, tr 100.0 4.5E-38 1.5E-42 355.1 7.6 257 687-986 61-350 (371)
249 1byg_A CSK, protein (C-termina 100.0 1.1E-37 3.9E-42 337.1 10.2 244 687-986 20-264 (278)
250 1fvr_A Tyrosine-protein kinase 100.0 1.4E-37 4.7E-42 344.9 11.1 256 688-986 25-291 (327)
251 1vzo_A Ribosomal protein S6 ki 100.0 1.1E-37 3.9E-42 349.0 10.4 247 687-981 53-309 (355)
252 2id5_A Lingo-1, leucine rich r 100.0 1.7E-36 5.9E-41 354.7 20.8 301 86-441 32-333 (477)
253 2ozo_A Tyrosine-protein kinase 100.0 2.3E-37 7.9E-42 370.0 13.7 248 689-986 336-589 (613)
254 2r3i_A Cell division protein k 100.0 4.6E-37 1.6E-41 336.3 14.7 202 688-908 3-207 (299)
255 2pml_X PFPK7, Ser/Thr protein 100.0 4.1E-37 1.4E-41 344.5 14.3 269 687-986 30-320 (348)
256 2jii_A Serine/threonine-protei 100.0 7.2E-38 2.5E-42 350.8 8.0 261 687-986 41-327 (352)
257 1wak_A Serine/threonine-protei 100.0 5.1E-37 1.7E-41 350.5 14.6 282 687-986 36-389 (397)
258 1j1b_A Glycogen synthase kinas 100.0 2.7E-37 9.1E-42 353.7 11.4 279 687-986 53-334 (420)
259 2h8h_A Proto-oncogene tyrosine 100.0 1.3E-37 4.3E-42 367.2 8.6 249 686-986 265-514 (535)
260 1z57_A Dual specificity protei 100.0 2.3E-36 8E-41 337.0 17.6 198 687-907 13-236 (339)
261 4fcg_A Uncharacterized protein 100.0 1.7E-36 5.8E-41 334.9 16.2 279 10-294 17-316 (328)
262 1zy4_A Serine/threonine-protei 100.0 6.4E-37 2.2E-41 335.8 12.7 257 686-986 4-281 (303)
263 3coi_A Mitogen-activated prote 100.0 4.2E-37 1.4E-41 344.8 11.5 200 687-907 23-226 (353)
264 1blx_A Cyclin-dependent kinase 100.0 9.6E-37 3.3E-41 338.2 14.2 207 686-907 9-221 (326)
265 3cek_A Dual specificity protei 100.0 4.2E-37 1.4E-41 338.8 11.2 258 678-986 18-290 (313)
266 4fl3_A Tyrosine-protein kinase 100.0 4.3E-37 1.5E-41 368.4 12.1 242 694-986 375-622 (635)
267 4e7w_A Glycogen synthase kinas 100.0 7.2E-37 2.5E-41 347.2 13.2 275 687-985 39-318 (394)
268 2wei_A Calmodulin-domain prote 100.0 9.8E-37 3.4E-41 331.4 13.7 251 685-986 19-274 (287)
269 1u46_A ACK-1, activated CDC42 100.0 2.4E-37 8.3E-42 337.0 8.8 251 687-986 17-275 (291)
270 3rgf_A Cyclin-dependent kinase 100.0 7.3E-37 2.5E-41 349.4 12.5 212 687-908 19-239 (405)
271 3fhr_A MAP kinase-activated pr 100.0 1.6E-36 5.4E-41 337.1 13.5 256 686-986 26-285 (336)
272 3qa8_A MGC80376 protein; kinas 100.0 2E-36 6.9E-41 356.0 13.7 277 687-986 13-295 (676)
273 2vx3_A Dual specificity tyrosi 100.0 3.8E-36 1.3E-40 340.5 15.5 204 684-908 50-261 (382)
274 3a99_A Proto-oncogene serine/t 100.0 9E-37 3.1E-41 336.9 9.9 241 685-986 40-291 (320)
275 2eu9_A Dual specificity protei 100.0 6.2E-36 2.1E-40 336.0 16.7 198 687-907 18-241 (355)
276 2iwi_A Serine/threonine-protei 100.0 1.4E-36 4.7E-41 334.6 9.8 245 681-986 24-281 (312)
277 1ogq_A PGIP-2, polygalacturona 100.0 2E-35 6.7E-40 324.5 18.6 256 357-615 50-310 (313)
278 1q8y_A SR protein kinase; tran 100.0 3.1E-36 1E-40 340.9 12.3 204 687-908 18-238 (373)
279 3aln_A Dual specificity mitoge 100.0 2.4E-36 8.2E-41 335.0 10.9 257 687-986 21-283 (327)
280 2j0j_A Focal adhesion kinase 1 100.0 3.7E-36 1.3E-40 361.7 12.3 250 686-986 388-642 (656)
281 2dyl_A Dual specificity mitoge 100.0 4.9E-36 1.7E-40 331.2 11.4 250 687-986 24-281 (318)
282 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.4E-36 1.2E-40 332.6 9.1 250 685-986 30-293 (319)
283 2rio_A Serine/threonine-protei 100.0 3.3E-35 1.1E-39 337.9 14.9 255 688-986 15-293 (434)
284 3p23_A Serine/threonine-protei 100.0 4.5E-35 1.5E-39 335.5 13.0 248 687-986 23-281 (432)
285 3o6n_A APL1; leucine-rich repe 100.0 7.1E-34 2.4E-38 323.2 21.9 200 372-612 156-355 (390)
286 2pzi_A Probable serine/threoni 100.0 8.1E-35 2.8E-39 354.1 14.4 236 687-984 79-316 (681)
287 3dzo_A Rhoptry kinase domain; 100.0 4.9E-35 1.7E-39 334.1 10.9 249 687-985 77-360 (413)
288 4fmz_A Internalin; leucine ric 100.0 5.5E-33 1.9E-37 310.7 25.6 174 377-586 173-346 (347)
289 3oja_B Anopheles plasmodium-re 100.0 1.5E-33 5.2E-38 338.3 21.8 200 372-612 162-361 (597)
290 3m2w_A MAP kinase-activated pr 100.0 4.3E-34 1.5E-38 312.4 15.2 235 686-986 15-254 (299)
291 4fmz_A Internalin; leucine ric 100.0 7.6E-33 2.6E-37 309.6 25.3 108 448-562 239-346 (347)
292 3uqc_A Probable conserved tran 100.0 2.7E-34 9.2E-39 310.9 12.6 224 687-986 30-256 (286)
293 2ft3_A Biglycan; proteoglycan, 100.0 2.5E-32 8.6E-37 303.1 22.8 197 359-584 125-331 (332)
294 2vuw_A Serine/threonine-protei 100.0 4.1E-34 1.4E-38 318.2 6.8 196 687-906 19-278 (336)
295 1xku_A Decorin; proteoglycan, 100.0 1.8E-31 6.1E-36 296.0 25.7 289 110-511 31-329 (330)
296 2ft3_A Biglycan; proteoglycan, 100.0 6.3E-32 2.2E-36 299.8 21.7 130 358-512 194-331 (332)
297 1xku_A Decorin; proteoglycan, 100.0 2.8E-31 9.5E-36 294.5 25.5 198 359-584 123-330 (330)
298 1z7x_W Ribonuclease inhibitor; 100.0 3E-35 1E-39 342.9 -14.7 385 87-539 4-441 (461)
299 2z80_A TOLL-like receptor 2, v 100.0 1E-31 3.5E-36 300.9 14.2 292 41-422 21-318 (353)
300 1z7x_W Ribonuclease inhibitor; 100.0 3.6E-34 1.2E-38 333.7 -8.5 362 158-587 3-412 (461)
301 2z66_A Variable lymphocyte rec 100.0 3.2E-29 1.1E-33 274.8 17.6 249 46-296 3-265 (306)
302 3ogk_B Coronatine-insensitive 100.0 6E-32 2.1E-36 325.6 -4.9 475 19-583 17-548 (592)
303 2z66_A Variable lymphocyte rec 100.0 2.9E-29 1E-33 275.1 16.9 275 336-615 11-293 (306)
304 1wwl_A Monocyte differentiatio 100.0 3.1E-30 1E-34 283.2 6.4 204 83-291 40-265 (312)
305 3oja_A Leucine-rich immune mol 100.0 8.5E-30 2.9E-34 296.7 8.2 244 357-614 34-287 (487)
306 1ozn_A Reticulon 4 receptor; N 100.0 2.4E-28 8.3E-33 264.7 19.1 251 360-614 14-266 (285)
307 3zyi_A Leucine-rich repeat-con 100.0 3E-28 1E-32 282.2 21.1 251 335-591 57-308 (452)
308 3zyj_A Leucine-rich repeat-con 100.0 2.4E-28 8.2E-33 282.0 20.0 248 336-589 47-295 (440)
309 3g06_A SSPH2 (leucine-rich rep 100.0 1E-28 3.5E-33 292.9 16.0 292 35-425 7-304 (622)
310 3zyj_A Leucine-rich repeat-con 100.0 5.8E-28 2E-32 278.8 21.5 250 358-613 44-296 (440)
311 1wwl_A Monocyte differentiatio 100.0 2.5E-30 8.6E-35 283.9 1.6 267 39-314 20-308 (312)
312 3zyi_A Leucine-rich repeat-con 100.0 6.5E-28 2.2E-32 279.4 21.8 250 358-613 55-307 (452)
313 2z80_A TOLL-like receptor 2, v 100.0 1.3E-28 4.6E-33 275.6 14.9 273 335-612 34-317 (353)
314 4fcg_A Uncharacterized protein 100.0 3.3E-28 1.1E-32 268.5 17.5 226 357-588 81-316 (328)
315 3ogk_B Coronatine-insensitive 100.0 1.1E-30 3.6E-35 314.7 -5.9 330 204-588 162-528 (592)
316 1ozn_A Reticulon 4 receptor; N 100.0 1.1E-27 3.8E-32 259.5 18.3 252 335-592 14-267 (285)
317 3g06_A SSPH2 (leucine-rich rep 99.9 1.3E-26 4.6E-31 274.8 24.5 108 452-573 201-308 (622)
318 3o53_A Protein LRIM1, AGAP0063 99.9 1.7E-28 5.7E-33 270.1 6.5 222 358-592 59-282 (317)
319 3o53_A Protein LRIM1, AGAP0063 99.9 5.1E-28 1.8E-32 266.2 8.0 157 358-542 121-280 (317)
320 4azs_A Methyltransferase WBDD; 99.9 1.5E-28 5.2E-33 289.8 3.9 185 696-904 242-437 (569)
321 2o6q_A Variable lymphocyte rec 99.9 7.9E-27 2.7E-31 250.4 16.8 220 47-295 2-221 (270)
322 2p1m_B Transport inhibitor res 99.9 9.2E-30 3.2E-34 306.7 -9.9 455 48-585 33-543 (594)
323 3oja_A Leucine-rich immune mol 99.9 1.1E-26 3.8E-31 270.4 11.1 247 330-590 32-286 (487)
324 2z62_A TOLL-like receptor 4, v 99.9 2E-25 6.7E-30 240.6 18.1 209 382-592 29-243 (276)
325 2z62_A TOLL-like receptor 4, v 99.9 4E-25 1.4E-29 238.1 18.3 221 77-301 21-246 (276)
326 2p1m_B Transport inhibitor res 99.9 1.6E-28 5.3E-33 295.9 -11.1 213 372-586 280-519 (594)
327 2o6q_A Variable lymphocyte rec 99.9 3.3E-24 1.1E-28 230.0 20.4 206 358-590 17-222 (270)
328 3m19_A Variable lymphocyte rec 99.9 8.4E-25 2.9E-29 231.8 15.4 192 48-245 3-194 (251)
329 1p9a_G Platelet glycoprotein I 99.9 1.1E-24 3.6E-29 235.8 16.3 205 377-611 6-210 (290)
330 1p9a_G Platelet glycoprotein I 99.9 4.7E-24 1.6E-28 230.7 18.5 203 356-589 9-211 (290)
331 3rfs_A Internalin B, repeat mo 99.9 1.5E-24 5.2E-29 232.8 12.5 220 359-592 21-241 (272)
332 3rfs_A Internalin B, repeat mo 99.9 5.2E-24 1.8E-28 228.6 14.6 206 63-280 42-247 (272)
333 3en9_A Glycoprotease, O-sialog 99.9 1.7E-24 5.9E-29 253.8 10.9 190 687-906 335-539 (540)
334 2xwt_C Thyrotropin receptor; s 99.9 1.3E-23 4.6E-28 220.9 14.8 203 77-289 25-236 (239)
335 4glp_A Monocyte differentiatio 99.9 4.9E-24 1.7E-28 233.6 7.9 223 359-587 66-308 (310)
336 3goz_A Leucine-rich repeat-con 99.9 1.3E-24 4.5E-29 243.7 3.0 231 66-296 2-270 (362)
337 4glp_A Monocyte differentiatio 99.9 2.7E-23 9.4E-28 227.7 13.2 201 110-315 91-307 (310)
338 3m19_A Variable lymphocyte rec 99.9 6.7E-23 2.3E-27 217.1 15.5 161 430-591 37-197 (251)
339 2ast_B S-phase kinase-associat 99.9 4.9E-25 1.7E-29 245.0 -1.5 207 24-241 16-233 (336)
340 2xwt_C Thyrotropin receptor; s 99.9 1.4E-22 4.7E-27 213.2 14.9 197 357-583 31-236 (239)
341 3goz_A Leucine-rich repeat-con 99.9 3.2E-24 1.1E-28 240.5 1.4 261 90-420 2-299 (362)
342 2o6s_A Variable lymphocyte rec 99.9 1.5E-22 5E-27 208.0 13.4 188 46-280 3-190 (208)
343 4ay9_X Follicle-stimulating ho 99.9 7.3E-23 2.5E-27 228.3 11.1 220 48-283 7-230 (350)
344 2ca6_A RAN GTPase-activating p 99.9 2.1E-24 7.1E-29 244.6 -2.5 243 347-590 23-320 (386)
345 1zar_A RIO2 kinase; serine kin 99.9 1E-22 3.5E-27 218.6 10.1 152 682-879 84-253 (282)
346 3cvr_A Invasion plasmid antige 99.9 4.7E-23 1.6E-27 241.2 8.0 208 39-294 32-245 (571)
347 1h6u_A Internalin H; cell adhe 99.9 3.9E-22 1.3E-26 217.9 14.6 194 380-590 40-234 (308)
348 1h6u_A Internalin H; cell adhe 99.9 7.1E-22 2.4E-26 215.8 16.0 198 82-296 37-234 (308)
349 4ay9_X Follicle-stimulating ho 99.9 1.3E-21 4.3E-26 218.2 15.3 242 361-611 13-260 (350)
350 2ca6_A RAN GTPase-activating p 99.9 1.9E-23 6.5E-28 236.8 0.2 238 62-299 32-323 (386)
351 3cvr_A Invasion plasmid antige 99.9 1.7E-21 5.8E-26 228.1 16.4 189 358-574 60-255 (571)
352 2ast_B S-phase kinase-associat 99.9 1.2E-22 4E-27 225.8 4.3 199 87-290 48-258 (336)
353 2v70_A SLIT-2, SLIT homolog 2 99.9 1.6E-21 5.6E-26 201.6 11.9 182 430-614 13-194 (220)
354 4b8c_D Glucose-repressible alc 99.8 1.2E-22 4.1E-27 247.1 2.5 257 17-292 129-404 (727)
355 3e6j_A Variable lymphocyte rec 99.8 5.3E-21 1.8E-25 199.1 14.6 165 41-221 10-174 (229)
356 2o6s_A Variable lymphocyte rec 99.8 3.3E-20 1.1E-24 190.3 15.1 149 361-513 11-160 (208)
357 2v9t_B SLIT homolog 2 protein 99.8 1.4E-20 4.7E-25 194.6 11.8 156 431-590 14-169 (220)
358 2v9t_B SLIT homolog 2 protein 99.8 3E-20 1E-24 192.1 13.6 159 46-219 7-165 (220)
359 2v70_A SLIT-2, SLIT homolog 2 99.8 5.1E-20 1.7E-24 190.3 13.4 153 66-221 15-168 (220)
360 2xot_A Amphoterin-induced prot 99.8 7.7E-20 2.6E-24 204.6 12.8 157 432-589 43-205 (361)
361 2xot_A Amphoterin-induced prot 99.8 7.1E-20 2.4E-24 204.9 11.6 178 431-612 21-205 (361)
362 1dce_A Protein (RAB geranylger 99.8 8.2E-22 2.8E-26 232.3 -5.4 226 51-300 286-554 (567)
363 1h6t_A Internalin B; cell adhe 99.8 5.2E-19 1.8E-23 191.3 14.8 172 84-294 44-215 (291)
364 1w8a_A SLIT protein; signaling 99.8 2.4E-19 8.1E-24 181.1 10.2 156 455-614 11-167 (192)
365 1h6t_A Internalin B; cell adhe 99.8 5.1E-19 1.8E-23 191.3 13.4 168 62-243 46-213 (291)
366 3e6j_A Variable lymphocyte rec 99.8 9.1E-19 3.1E-23 182.2 14.4 156 430-590 21-176 (229)
367 1m9s_A Internalin B; cell inva 99.8 6.6E-19 2.3E-23 208.7 14.6 173 84-295 41-213 (605)
368 1dce_A Protein (RAB geranylger 99.8 6.4E-22 2.2E-26 233.2 -11.6 191 378-592 346-552 (567)
369 1m9s_A Internalin B; cell inva 99.8 5E-19 1.7E-23 209.7 11.5 193 361-570 25-218 (605)
370 1zth_A RIO1 serine protein kin 99.8 9E-19 3.1E-23 185.7 9.4 137 690-853 49-219 (258)
371 1w8a_A SLIT protein; signaling 99.8 3.5E-18 1.2E-22 172.5 12.6 179 430-614 10-188 (192)
372 4ezg_A Putative uncharacterize 99.8 2.8E-18 9.4E-23 174.2 11.8 151 83-241 41-192 (197)
373 4ezg_A Putative uncharacterize 99.7 4.6E-18 1.6E-22 172.5 12.0 149 430-587 46-195 (197)
374 1xeu_A Internalin C; cellular 99.7 4.3E-18 1.5E-22 181.0 10.9 163 66-243 23-185 (263)
375 1xeu_A Internalin C; cellular 99.7 3.5E-18 1.2E-22 181.7 9.4 169 84-268 17-185 (263)
376 4b8c_D Glucose-repressible alc 99.7 8.3E-19 2.8E-23 213.4 4.7 189 387-586 207-404 (727)
377 2wfh_A SLIT homolog 2 protein 99.7 8.4E-18 2.9E-22 169.6 10.1 132 455-591 13-144 (193)
378 2ell_A Acidic leucine-rich nuc 99.7 5.7E-17 2E-21 159.9 11.2 137 85-224 23-164 (168)
379 3sb4_A Hypothetical leucine ri 99.7 3.7E-17 1.3E-21 180.4 10.0 134 76-215 13-157 (329)
380 2o6r_A Variable lymphocyte rec 99.7 1.3E-16 4.4E-21 158.8 12.1 139 46-199 3-141 (177)
381 3sb4_A Hypothetical leucine ri 99.7 5.1E-17 1.8E-21 179.2 8.6 123 108-238 23-156 (329)
382 2ell_A Acidic leucine-rich nuc 99.7 1.1E-16 3.9E-21 157.7 9.6 136 452-590 24-164 (168)
383 2o6r_A Variable lymphocyte rec 99.7 2.6E-16 8.9E-21 156.6 11.3 134 454-591 9-142 (177)
384 2je0_A Acidic leucine-rich nuc 99.6 1.1E-16 3.7E-21 154.4 7.1 127 86-214 17-148 (149)
385 2wfh_A SLIT homolog 2 protein 99.6 5.1E-16 1.7E-20 156.5 11.8 125 67-195 15-139 (193)
386 2je0_A Acidic leucine-rich nuc 99.6 1.8E-16 6.1E-21 152.9 7.9 128 452-582 17-149 (149)
387 4gyi_A RIO2 kinase; protein ki 99.6 2.6E-16 8.7E-21 172.3 6.7 146 689-854 96-266 (397)
388 1ds9_A Outer arm dynein; leuci 99.6 3.4E-17 1.2E-21 166.2 -4.0 130 64-198 20-156 (198)
389 1ds9_A Outer arm dynein; leuci 99.6 3E-17 1E-21 166.6 -4.4 138 82-224 14-158 (198)
390 1a9n_A U2A', U2A'; complex (nu 99.6 2E-15 6.9E-20 149.9 7.4 133 81-219 14-153 (176)
391 1a9n_A U2A', U2A'; complex (nu 99.6 2.2E-15 7.4E-20 149.7 7.4 137 447-589 14-156 (176)
392 4fdw_A Leucine rich hypothetic 99.6 5.5E-14 1.9E-18 158.2 18.5 268 86-440 113-382 (401)
393 4fdw_A Leucine rich hypothetic 99.5 2.1E-13 7.1E-18 153.5 19.9 265 133-490 112-383 (401)
394 4fs7_A Uncharacterized protein 99.5 1.4E-13 4.8E-18 155.7 18.5 67 98-166 59-125 (394)
395 3g39_A Variable lymphocyte rec 99.5 2E-14 6.7E-19 141.6 9.3 90 501-590 30-119 (170)
396 4fs7_A Uncharacterized protein 99.5 3.1E-13 1E-17 152.9 19.8 113 121-238 58-170 (394)
397 2r9u_A Variable lymphocyte rec 99.5 4.4E-14 1.5E-18 139.5 9.5 104 455-562 15-118 (174)
398 3g39_A Variable lymphocyte rec 99.5 8.6E-14 2.9E-18 137.0 10.2 109 453-565 10-118 (170)
399 2r9u_A Variable lymphocyte rec 99.5 1.6E-13 5.5E-18 135.5 10.3 85 111-195 34-118 (174)
400 4gt6_A Cell surface protein; l 99.4 1.4E-11 4.9E-16 139.2 19.1 107 448-561 284-390 (394)
401 2ifg_A High affinity nerve gro 99.3 1.3E-12 4.5E-17 145.1 7.7 132 456-591 12-146 (347)
402 3un9_A NLR family member X1; l 99.3 3.4E-14 1.2E-18 158.4 -5.2 137 452-588 101-254 (372)
403 2ifg_A High affinity nerve gro 99.3 3.5E-12 1.2E-16 141.7 9.5 107 481-590 12-120 (347)
404 3un9_A NLR family member X1; l 99.3 1.7E-13 5.9E-18 152.6 -2.7 135 86-220 72-225 (372)
405 4gt6_A Cell surface protein; l 99.3 3.2E-10 1.1E-14 128.1 23.2 134 372-536 256-389 (394)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 2E-11 7E-16 129.6 10.6 149 682-852 8-213 (263)
407 3rw6_A Nuclear RNA export fact 99.0 4.7E-12 1.6E-16 132.1 -6.8 24 48-71 76-99 (267)
408 1nd4_A Aminoglycoside 3'-phosp 99.0 4.2E-10 1.4E-14 119.3 6.6 139 687-852 19-214 (264)
409 4h09_A Hypothetical leucine ri 98.9 3.5E-08 1.2E-12 110.7 21.1 145 374-524 210-355 (379)
410 4h09_A Hypothetical leucine ri 98.9 2.8E-08 9.6E-13 111.5 20.1 165 377-571 190-354 (379)
411 2ra8_A Uncharacterized protein 98.9 2.9E-10 9.9E-15 125.4 2.0 156 62-220 107-293 (362)
412 3sg8_A APH(2'')-ID; antibiotic 98.9 6E-10 2.1E-14 120.9 4.1 190 693-905 25-287 (304)
413 3dxp_A Putative acyl-COA dehyd 98.9 4.5E-09 1.5E-13 117.0 10.6 145 692-852 42-248 (359)
414 2ra8_A Uncharacterized protein 98.8 1.4E-09 4.8E-14 119.8 4.5 182 86-292 107-320 (362)
415 3rw6_A Nuclear RNA export fact 98.6 3.2E-09 1.1E-13 110.7 -2.2 63 500-564 169-235 (267)
416 1io0_A Tropomodulin; LRR prote 98.5 6.2E-09 2.1E-13 103.5 -2.0 121 79-219 29-164 (185)
417 3r70_A Aminoglycoside phosphot 98.5 3.6E-07 1.2E-11 99.6 11.8 137 689-853 38-238 (320)
418 1io0_A Tropomodulin; LRR prote 98.5 2.2E-08 7.4E-13 99.5 0.5 87 500-586 64-164 (185)
419 3d1u_A Putative fructosamine-3 98.3 1.2E-06 4E-11 93.5 10.4 76 692-777 19-97 (288)
420 4gkh_A Aminoglycoside 3'-phosp 98.3 1.5E-06 5E-11 92.3 11.1 137 694-852 30-223 (272)
421 3tdw_A Gentamicin resistance p 98.3 3.1E-06 1.1E-10 91.3 12.0 138 693-853 24-225 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.0 1.6E-05 5.4E-10 87.9 10.9 152 691-853 44-244 (362)
423 3ats_A Putative uncharacterize 97.9 1.2E-05 3.9E-10 89.2 8.1 85 693-779 25-122 (357)
424 2olc_A MTR kinase, methylthior 97.9 2.3E-05 7.8E-10 88.1 8.9 76 693-775 35-120 (397)
425 3e4g_A ATP synthase subunit S, 97.7 1.2E-05 4E-10 77.6 2.2 34 183-216 115-149 (176)
426 3f7w_A Putative fructosamine-3 97.7 0.0001 3.4E-09 78.7 9.7 79 689-777 16-97 (288)
427 3e4g_A ATP synthase subunit S, 97.7 9E-06 3.1E-10 78.3 1.2 84 477-560 61-150 (176)
428 2q83_A YTAA protein; 2635576, 97.6 0.00046 1.6E-08 75.6 14.7 153 694-852 38-252 (346)
429 2pyw_A Uncharacterized protein 97.6 5.2E-05 1.8E-09 85.8 5.5 80 821-902 231-313 (420)
430 3jr1_A Putative fructosamine-3 97.3 0.00095 3.3E-08 71.5 11.7 145 693-848 41-232 (312)
431 2ppq_A HSK, HK, homoserine kin 97.3 0.0009 3.1E-08 72.5 11.7 173 676-852 5-217 (322)
432 1pgv_A TMD-1, tropomodulin TMD 97.3 6E-05 2.1E-09 74.0 1.4 86 500-585 69-169 (197)
433 1pgv_A TMD-1, tropomodulin TMD 97.2 4E-05 1.4E-09 75.3 -0.5 66 82-147 37-111 (197)
434 3dxq_A Choline/ethanolamine ki 97.1 0.0014 4.8E-08 70.2 9.7 73 691-777 21-95 (301)
435 1zyl_A Hypothetical protein YI 97.0 0.002 6.9E-08 69.9 10.8 171 675-852 8-223 (328)
436 3feg_A Choline/ethanolamine ki 96.8 0.0015 5.1E-08 71.9 7.1 148 693-852 55-254 (379)
437 3rfe_A Platelet glycoprotein I 96.8 0.0017 5.8E-08 59.5 6.2 38 550-587 32-69 (130)
438 1nw1_A Choline kinase (49.2 KD 96.7 0.0022 7.6E-08 72.2 8.2 74 693-777 78-159 (429)
439 2qg7_A Ethanolamine kinase PV0 96.7 0.004 1.4E-07 70.4 10.0 75 693-777 113-188 (458)
440 3csv_A Aminoglycoside phosphot 96.7 0.0065 2.2E-07 66.0 11.2 33 821-853 182-218 (333)
441 3rfe_A Platelet glycoprotein I 96.4 0.0032 1.1E-07 57.7 5.3 35 160-194 33-67 (130)
442 3c5i_A Choline kinase; choline 96.3 0.0048 1.6E-07 68.2 7.3 75 693-777 38-121 (369)
443 3i1a_A Spectinomycin phosphotr 96.2 0.031 1.1E-06 60.7 12.5 32 822-853 206-237 (339)
444 3f2s_A CK, chetk-alpha, cholin 95.6 0.027 9.2E-07 62.2 9.2 149 693-852 57-280 (401)
445 2yle_A Protein spire homolog 1 94.4 0.13 4.5E-06 50.6 8.8 103 775-904 33-135 (229)
446 3mes_A Choline kinase; malaria 94.2 0.033 1.1E-06 62.1 4.8 149 693-852 75-291 (424)
447 2l2t_A Receptor tyrosine-prote 91.6 0.14 4.9E-06 35.7 3.2 28 634-661 10-37 (44)
448 3g15_A CK, chetk-alpha, cholin 91.5 0.069 2.4E-06 59.4 2.4 30 823-852 245-280 (401)
449 2ks1_B Epidermal growth factor 89.8 0.12 4.1E-06 36.2 1.5 26 636-661 13-38 (44)
450 2jwa_A Receptor tyrosine-prote 84.7 0.68 2.3E-05 32.2 2.8 25 638-663 15-39 (44)
451 4ann_A ESSB; membrane protein, 84.1 1.6 5.5E-05 42.9 6.4 91 795-914 76-166 (215)
452 2k1k_A Ephrin type-A receptor 82.5 1.1 3.8E-05 30.3 3.1 9 636-644 12-20 (38)
453 3cxl_A N-chimerin; SH2, RHO-GA 76.2 0.35 1.2E-05 54.6 -1.5 61 691-754 145-213 (463)
454 4ano_A ESSB; membrane protein, 72.8 6 0.0002 39.0 6.5 83 796-907 81-164 (219)
455 2l8s_A Integrin alpha-1; trans 56.6 13 0.00044 27.2 3.8 22 633-654 9-30 (54)
456 2jwa_A Receptor tyrosine-prote 54.5 8 0.00027 27.0 2.4 22 633-655 14-35 (44)
457 2l2t_A Receptor tyrosine-prote 53.3 9 0.00031 26.7 2.5 31 638-668 10-41 (44)
458 2knc_A Integrin alpha-IIB; tra 49.1 20 0.0007 26.2 3.9 22 633-654 12-33 (54)
459 2k9y_A Ephrin type-A receptor 49.0 13 0.00046 25.4 2.9 12 635-646 14-25 (41)
460 2l9u_A Receptor tyrosine-prote 42.3 20 0.00068 23.0 2.6 30 632-661 4-33 (40)
461 2klu_A T-cell surface glycopro 40.9 24 0.00083 26.6 3.3 18 639-656 12-29 (70)
462 2ks1_B Epidermal growth factor 39.6 8.1 0.00028 27.0 0.6 29 638-666 11-40 (44)
463 2lz0_A Uncharacterized protein 38.9 46 0.0016 28.0 5.4 40 101-141 11-50 (100)
464 2lz0_A Uncharacterized protein 36.1 44 0.0015 28.1 4.9 49 366-415 5-53 (100)
465 2k1a_A Integrin alpha-IIB; sin 34.5 52 0.0018 22.7 3.9 21 633-653 10-30 (42)
466 3ls8_A Phosphatidylinositol 3- 26.6 4.7E+02 0.016 29.9 12.6 47 798-851 453-501 (614)
467 3ox7_P MH027; urokinase-type p 24.5 16 0.00055 20.4 0.0 9 48-56 6-14 (23)
468 2l6w_A Beta-type platelet-deri 28.7 18 0.0006 24.3 0.0 13 651-663 23-35 (39)
469 1afo_A Glycophorin A; integral 22.8 92 0.0031 20.8 3.3 22 633-654 12-33 (40)
470 1cja_A Protein (actin-fragmin 21.9 2.3E+02 0.0077 29.7 8.0 144 690-852 71-237 (342)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.1e-82 Score=782.49 Aligned_cols=600 Identities=31% Similarity=0.462 Sum_probs=497.2
Q ss_pred ccCcCCCHhHHHHHHHHHHhccCCCcCCCCCCCCCCCCCcceeeEecCCCCeEEEEeccCCCCccc---cC---------
Q 046598 12 ASTVAGNETDRLALLELKSKITHDPLGVLASWNESSHFCQWRGVTCSRRHQRVTILDLESLKLAGS---IS--------- 79 (986)
Q Consensus 12 ~~~~~~~~~~~~~ll~~k~~~~~~~~~~l~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~---~~--------- 79 (986)
++++.+.++||+|||+||+++. ||. .+++|+.+++||+|.||+|+ .++|+.+||+++++.|. +|
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~-~~~-~l~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L 79 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLP-DKN-LLPDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGL 79 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCS-CTT-SSTTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTC
T ss_pred CccccCCHHHHHHHHHHHhhCC-Ccc-cccCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcc
Confidence 4455567899999999999996 888 99999988899999999998 67999999999999887 44
Q ss_pred --------------cCccCCCCCCEEEccCCCccccCCc--chhccccCceeeceecccCCCCccch-hcCccccceecc
Q 046598 80 --------------PHVGNLSFLKVLRLYNNSFNHEIPS--EFDRLRRLQVLALHYNSIGGAIPANI-SSCSNLIQLRLF 142 (986)
Q Consensus 80 --------------~~~~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls 142 (986)
+.|+.+++|++|+|++|.+.+.+|. .|+++++|++|+|++|.+++.+|..+ ..+++|++|+|+
T Consensus 80 ~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls 159 (768)
T 3rgz_A 80 ESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 159 (768)
T ss_dssp CEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECC
T ss_pred cccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECC
Confidence 5788889999999999999988888 89999999999999999888887765 667777777777
Q ss_pred cccccCccCcc---c----------------------cCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCc
Q 046598 143 HNQLVGKIPSE---L----------------------SSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGS 197 (986)
Q Consensus 143 ~N~l~~~~p~~---~----------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 197 (986)
+|.+++..|.. + ..+++|++|+|++|++++.+|. |+++++|++|+|++|++++.
T Consensus 160 ~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~ 238 (768)
T 3rgz_A 160 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGD 238 (768)
T ss_dssp SSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSC
T ss_pred CCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCc
Confidence 77776555543 3 4556666666667777666665 77777777777777777777
Q ss_pred CcchhhccCCCceeecccccccccCCccccCCCCccEEeccccccccccCCcccccccccceEEecCceecccCCccccC
Q 046598 198 IPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISN 277 (986)
Q Consensus 198 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 277 (986)
+|..|+.+++|++|+|++|++++.+|.. .+++|+.|++++|.+.+.+|..++..+++|++|++++|++++.+|..|++
T Consensus 239 ~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~ 316 (768)
T 3rgz_A 239 FSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGS 316 (768)
T ss_dssp HHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGG
T ss_pred ccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhc
Confidence 7777777777777777777777766665 67777777777777777788777655688888888888888888888888
Q ss_pred CCCCcEEecccccccCC-Cch-hhhhhhHhhhhhccCCCCCCCCCCcccc-------------------ccccc--cccc
Q 046598 278 ASNLEIFHGSVNKLTGA-APY-LEKLQRLLVFGILGNSLGSRGDRDLNFL-------------------CSLTN--ATRL 334 (986)
Q Consensus 278 l~~L~~L~ls~N~l~~~-~~~-l~~l~~L~~l~l~~n~l~~~~~~~l~~l-------------------~~l~~--~~~L 334 (986)
+++|+.|++++|++++. +.. +..+++|+.+++++|.+.......+..+ ..+.. ++.|
T Consensus 317 l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L 396 (768)
T 3rgz_A 317 CSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 396 (768)
T ss_dssp CTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCC
T ss_pred CCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCc
Confidence 88888888888888743 433 7778888888888887753222221111 11112 5678
Q ss_pred ceeeccccccccCCCcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccC
Q 046598 335 KWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQR 414 (986)
Q Consensus 335 ~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 414 (986)
+.|+++.|.+++.+|..+..+ ++|+.|++++|++++.+|..|..+++|++|++++|.+++.+|..|..+++|++|+|++
T Consensus 397 ~~L~L~~n~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 475 (768)
T 3rgz_A 397 QELYLQNNGFTGKIPPTLSNC-SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF 475 (768)
T ss_dssp CEEECCSSEEEEECCGGGGGC-TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCS
T ss_pred cEEECCCCccccccCHHHhcC-CCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecC
Confidence 888888888888888888776 6789999999999888899999999999999999999988999999999999999999
Q ss_pred ccceeecCcccccc-cccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccC
Q 046598 415 NRFQGNIPPSIGNL-KLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSI 493 (986)
Q Consensus 415 N~l~~~~~~~~~~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~ 493 (986)
|++++.+|..+..+ +|++|+|++|++++.+|.+++.+++|++|+|++|+++|.+|.. ++.+++|+.|++++|+++|.+
T Consensus 476 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~g~i 554 (768)
T 3rgz_A 476 NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE-LGDCRSLIWLDLNTNLFNGTI 554 (768)
T ss_dssp SCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGG-GGGCTTCCEEECCSSEEESBC
T ss_pred CcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHH-HcCCCCCCEEECCCCccCCcC
Confidence 99998888888765 5999999999999999999999999999999999999888887 677889999999999998777
Q ss_pred Cccc----------------------------------------------------------------------cccccc
Q 046598 494 PSEV----------------------------------------------------------------------GNLKNL 503 (986)
Q Consensus 494 p~~~----------------------------------------------------------------------~~l~~L 503 (986)
|..+ ..+++|
T Consensus 555 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L 634 (768)
T 3rgz_A 555 PAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSM 634 (768)
T ss_dssp CGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCC
T ss_pred ChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccc
Confidence 7543 335778
Q ss_pred chhhccCccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCC
Q 046598 504 EILNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNN 583 (986)
Q Consensus 504 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N 583 (986)
+.|||++|+++|.+|..|+++++|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..+..+++|++|||++|
T Consensus 635 ~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N 714 (768)
T 3rgz_A 635 MFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 714 (768)
T ss_dssp CEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSS
T ss_pred cEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCccccccccceeeeCCcccccCCCCCCCCCCCCc
Q 046598 584 DLEGVVPTQGVFKNASITSVFGNLKLCGGIPEFQLPTCSSK 624 (986)
Q Consensus 584 ~l~~~~p~~~~~~~~~~~~~~~n~~lcg~~~~~~~~~~~~~ 624 (986)
+++|.+|..++|.++...++.||+++||.|.. .|...
T Consensus 715 ~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~----~C~~~ 751 (768)
T 3rgz_A 715 NLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP----RCDPS 751 (768)
T ss_dssp EEEEECCSSSSGGGSCGGGGCSCTEEESTTSC----CCCSC
T ss_pred cccccCCCchhhccCCHHHhcCCchhcCCCCc----CCCCC
Confidence 99999999999999999999999999998743 57544
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.7e-63 Score=612.06 Aligned_cols=521 Identities=33% Similarity=0.497 Sum_probs=452.4
Q ss_pred CeEEEEeccCCCCccccCc--CccCCCCCCEEEccCCCccccCCcch-hccccCceeeceecccCCCCccc---h-----
Q 046598 62 QRVTILDLESLKLAGSISP--HVGNLSFLKVLRLYNNSFNHEIPSEF-DRLRRLQVLALHYNSIGGAIPAN---I----- 130 (986)
Q Consensus 62 ~~v~~l~l~~~~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~---~----- 130 (986)
.+++.|||++|.+.|.+|. .++++++|++|+|++|.+.+.+|..+ .++++|++|+|++|++++..|.. +
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~ 179 (768)
T 3rgz_A 100 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGE 179 (768)
T ss_dssp TTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTT
T ss_pred CCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCC
Confidence 4678899999999988888 88888888888888888888777665 66777777777777766555543 2
Q ss_pred -----------------hcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCc
Q 046598 131 -----------------SSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNN 193 (986)
Q Consensus 131 -----------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 193 (986)
..+++|++|+|++|.+++.+|. ++++++|++|+|++|++++.+|..|+++++|++|+|++|+
T Consensus 180 L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~ 258 (768)
T 3rgz_A 180 LKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQ 258 (768)
T ss_dssp CCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSC
T ss_pred CCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCc
Confidence 5677888888888888887777 9999999999999999999999999999999999999999
Q ss_pred ccCcCcchhhccCCCceeecccccccccCCccccCC-CCccEEeccccccccccCCcccccccccceEEecCceecccCC
Q 046598 194 LEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNI-SSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAIP 272 (986)
Q Consensus 194 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l-~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p 272 (986)
+++.+|.. .+++|++|+|++|++++.+|..++.. ++|+.|++++|.+.+.+|..+. .+++|++|++++|++++.+|
T Consensus 259 l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~ip 335 (768)
T 3rgz_A 259 FVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFG-SCSLLESLALSSNNFSGELP 335 (768)
T ss_dssp CEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGG-GCTTCCEEECCSSEEEEECC
T ss_pred ccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHh-cCCCccEEECCCCcccCcCC
Confidence 98877765 78899999999999998889888876 8899999999999888887654 68899999999999988888
Q ss_pred cc-ccCCCCCcEEeccccccc-CCCchhhhhh-hHhhhhhccCCCCCCCCCC--------c------------ccccccc
Q 046598 273 PT-ISNASNLEIFHGSVNKLT-GAAPYLEKLQ-RLLVFGILGNSLGSRGDRD--------L------------NFLCSLT 329 (986)
Q Consensus 273 ~~-l~~l~~L~~L~ls~N~l~-~~~~~l~~l~-~L~~l~l~~n~l~~~~~~~--------l------------~~l~~l~ 329 (986)
.. +.++++|++|++++|+++ ..+..+..+. +|+.+++++|.+....... + .....+.
T Consensus 336 ~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~ 415 (768)
T 3rgz_A 336 MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 415 (768)
T ss_dssp HHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGG
T ss_pred HHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHh
Confidence 76 888999999999999988 4566677776 7888888888764311111 1 1223577
Q ss_pred cccccceeeccccccccCCCcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCE
Q 046598 330 NATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKD 409 (986)
Q Consensus 330 ~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 409 (986)
++++|+.|+++.|.+++.+|..+..+ ++|+.|++++|++++.+|..+..+++|++|++++|++++.+|..|..+++|++
T Consensus 416 ~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 494 (768)
T 3rgz_A 416 NCSELVSLHLSFNYLSGTIPSSLGSL-SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNW 494 (768)
T ss_dssp GCTTCCEEECCSSEEESCCCGGGGGC-TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred cCCCCCEEECcCCcccCcccHHHhcC-CCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCE
Confidence 88999999999999999999999887 68999999999999999999999999999999999999999999999999999
Q ss_pred EEccCccceeecCcccccc-cccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCccccc--------------
Q 046598 410 LRLQRNRFQGNIPPSIGNL-KLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIG-------------- 474 (986)
Q Consensus 410 L~Ls~N~l~~~~~~~~~~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~-------------- 474 (986)
|+|++|++++.+|..+..+ +|++|+|++|++++.+|..++.+++|+.|++++|+++|.+|..++.
T Consensus 495 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~ 574 (768)
T 3rgz_A 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKR 574 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCE
T ss_pred EEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccc
Confidence 9999999999999998766 5999999999999999999999999999999999999999876432
Q ss_pred -------------------------------------------------------CCCcceEEEccCCcccccCCccccc
Q 046598 475 -------------------------------------------------------LSSSLIVLDLSRNQLTGSIPSEVGN 499 (986)
Q Consensus 475 -------------------------------------------------------~~~~L~~L~Ls~N~l~~~~p~~~~~ 499 (986)
.+++|+.|||++|+++|.+|..+++
T Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~ 654 (768)
T 3rgz_A 575 YVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 654 (768)
T ss_dssp EEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGG
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhc
Confidence 2467899999999999999999999
Q ss_pred ccccchhhccCccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceee
Q 046598 500 LKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLN 579 (986)
Q Consensus 500 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ 579 (986)
+++|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..++.+++|++|||++|+++|.+|.. ..+.++....
T Consensus 655 l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~ 733 (768)
T 3rgz_A 655 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAK 733 (768)
T ss_dssp CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGG
T ss_pred cccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999975 4455666677
Q ss_pred ccCCc-cccc
Q 046598 580 LSNND-LEGV 588 (986)
Q Consensus 580 ls~N~-l~~~ 588 (986)
+.+|+ +.|.
T Consensus 734 ~~gN~~Lcg~ 743 (768)
T 3rgz_A 734 FLNNPGLCGY 743 (768)
T ss_dssp GCSCTEEEST
T ss_pred hcCCchhcCC
Confidence 78886 5553
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=8.5e-60 Score=578.07 Aligned_cols=562 Identities=21% Similarity=0.228 Sum_probs=479.7
Q ss_pred CCcceeeEecCC---------CCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeecee
Q 046598 49 FCQWRGVTCSRR---------HQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHY 119 (986)
Q Consensus 49 ~c~w~gv~c~~~---------~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 119 (986)
.|.++.|.|+.. ..+++.|||++|++++..+..|+++++|++|+|++|.+++..|.+|+++++|++|+|++
T Consensus 3 ~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 82 (680)
T 1ziw_A 3 TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH 82 (680)
T ss_dssp -CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCS
T ss_pred eeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCC
Confidence 356666777642 35799999999999988788899999999999999999999999999999999999999
Q ss_pred cccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCc
Q 046598 120 NSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIP 199 (986)
Q Consensus 120 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 199 (986)
|++++..+..|+.+++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|++++..+
T Consensus 83 n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 162 (680)
T 1ziw_A 83 NELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKS 162 (680)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCH
T ss_pred CccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCH
Confidence 99997666689999999999999999998888999999999999999999999999999999999999999999998888
Q ss_pred chhh--ccCCCceeecccccccccCCccccCC---------------------------CCccEEeccccccccccCCcc
Q 046598 200 DTLG--WLKNLVNLTMAQNRLSGTIPSSIFNI---------------------------SSITGFDAGVNKIQGAIPLDY 250 (986)
Q Consensus 200 ~~~~--~l~~L~~L~L~~N~l~~~~p~~l~~l---------------------------~~L~~L~l~~N~l~~~~p~~~ 250 (986)
..+. .+++|++|+|++|++++..|..+..+ ++|+.|++++|.+.+..|..+
T Consensus 163 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~ 242 (680)
T 1ziw_A 163 EELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTF 242 (680)
T ss_dssp HHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTT
T ss_pred HHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHh
Confidence 7765 45899999999999998888877665 456777788888877666554
Q ss_pred ccccc--ccceEEecCceecccCCccccCCCCCcEEecccccccCCCc-hhhhhhhHhhhhhccCCCCCCC-CCCcccc-
Q 046598 251 GFSLQ--NLQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLTGAAP-YLEKLQRLLVFGILGNSLGSRG-DRDLNFL- 325 (986)
Q Consensus 251 ~~~l~--~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~-~l~~l~~L~~l~l~~n~l~~~~-~~~l~~l- 325 (986)
. +++ +|++|++++|++++..|..|+.+++|+.|++++|++++.++ .+..+++|+.+++.+|...... ...+..+
T Consensus 243 ~-~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~ 321 (680)
T 1ziw_A 243 L-GLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKID 321 (680)
T ss_dssp G-GGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEEC
T ss_pred h-ccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccC
Confidence 3 454 49999999999998888999999999999999999988755 6788889999988876443210 0011111
Q ss_pred -cccccccccceeeccccccccCCCcccccccccceEEEccCCcccc--cCCccccCC--CCCCEEEccCccccCcCCCc
Q 046598 326 -CSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFG--NIPAAIGKF--VNLQRLDMCSNRLSGTIPPA 400 (986)
Q Consensus 326 -~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~--~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~ 400 (986)
..+..+++|+.++++.|.+++..|..+..+ ++|+.|++++|.+.. .....|..+ ++|+.|++++|++++..|.+
T Consensus 322 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~ 400 (680)
T 1ziw_A 322 DFSFQWLKCLEHLNMEDNDIPGIKSNMFTGL-INLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDA 400 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBCCCCTTTTTTC-TTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTT
T ss_pred hhhcccCCCCCEEECCCCccCCCChhHhccc-cCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhh
Confidence 146678899999999999998777767665 689999999998542 333445443 58999999999999999999
Q ss_pred ccCCCCCCEEEccCccceeecC-cccccc-cccEEEecccccCCCCCcccCCCCCCCeeecCCCccC--CCCCcccccCC
Q 046598 401 IGELQNLKDLRLQRNRFQGNIP-PSIGNL-KLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLT--GTIPPQFIGLS 476 (986)
Q Consensus 401 ~~~l~~L~~L~Ls~N~l~~~~~-~~~~~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~ip~~~~~~~ 476 (986)
|..+++|+.|+|++|++.+.+| ..+..+ +|++|++++|++.+..+..|..+++|+.|++++|.++ +.+|.. +..+
T Consensus 401 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~-~~~l 479 (680)
T 1ziw_A 401 FSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSP-FQPL 479 (680)
T ss_dssp TTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCT-TTTC
T ss_pred hhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcc-cccC
Confidence 9999999999999999998776 566555 5999999999999999999999999999999999987 466766 7888
Q ss_pred CcceEEEccCCcccccCCcccccccccchhhccCccccccCc--------ccccCCccccEEecccccccccCCccccCC
Q 046598 477 SSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIP--------STLGSCIKLEQLEMQENFLQGPIPSSLSSL 548 (986)
Q Consensus 477 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 548 (986)
++|+.|++++|+|++..+..|..+++|++|+|++|++++..+ ..|.++++|++|+|++|+|+...+..|..+
T Consensus 480 ~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 559 (680)
T 1ziw_A 480 RNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL 559 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccc
Confidence 999999999999998778889999999999999999986422 248899999999999999996555679999
Q ss_pred CCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCCc-c-ccccccceeeeCCcccccCC
Q 046598 549 RGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPTQ-G-VFKNASITSVFGNLKLCGGI 613 (986)
Q Consensus 549 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~-~~~~~~~~~~~~n~~lcg~~ 613 (986)
++|+.|+|++|+|++..+..|..+++|++|+|++|++++.+|.. . .++++..+++.||||.|++.
T Consensus 560 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 560 FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred cCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 99999999999999877788899999999999999999988764 2 57889999999999999875
No 4
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.7e-60 Score=575.46 Aligned_cols=501 Identities=21% Similarity=0.289 Sum_probs=342.2
Q ss_pred CCCHhHHHHHHHHHHhccCCCcC-------CCCCCCCCCCCCcc---eeeEecCCCCeEEEEeccCCCCccccCcCccCC
Q 046598 16 AGNETDRLALLELKSKITHDPLG-------VLASWNESSHFCQW---RGVTCSRRHQRVTILDLESLKLAGSISPHVGNL 85 (986)
Q Consensus 16 ~~~~~~~~~ll~~k~~~~~~~~~-------~l~~w~~~~~~c~w---~gv~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l 85 (986)
+....|++||.+||.++..+++. ..++|+.+++||.| .||+|+.. +||+.|+|+++++.|.+|+++++|
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L 104 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQL 104 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGC
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcC
Confidence 33458999999999998544333 23489988999999 99999865 799999999999999999999999
Q ss_pred CCCCEEEccCCCc------cc------cCCcchhccccCceeeceecccCCCCccchhc-CccccceecccccccCccCc
Q 046598 86 SFLKVLRLYNNSF------NH------EIPSEFDRLRRLQVLALHYNSIGGAIPANISS-CSNLIQLRLFHNQLVGKIPS 152 (986)
Q Consensus 86 ~~L~~L~L~~n~l------~~------~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~ 152 (986)
++|++|+|++|.+ .+ .+|... +..|+ +++++|.+.+.+|..+.. +..+..+++....+..
T Consensus 105 ~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~---- 177 (636)
T 4eco_A 105 TELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK---- 177 (636)
T ss_dssp TTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC----
T ss_pred ccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccc----
Confidence 9999999999977 33 456555 67788 999999999988887763 3445555554322221
Q ss_pred cccCCCCCCeEEcc--CCcCCCCcccccCCCcCcceeeccCCcccCc-----------------Ccchhh--ccCCCcee
Q 046598 153 ELSSLSKIEHISVN--DNNLTGSIPSSLGNLSSIRSLFLSGNNLEGS-----------------IPDTLG--WLKNLVNL 211 (986)
Q Consensus 153 ~~~~l~~L~~L~L~--~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L 211 (986)
.....++.+.+. +|++++ +|..|+++++|++|+|++|++++. +|+.++ .+++|++|
T Consensus 178 --~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L 254 (636)
T 4eco_A 178 --SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDV 254 (636)
T ss_dssp --CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEE
T ss_pred --ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEE
Confidence 111122222222 344444 444455555555555555555443 455544 55555555
Q ss_pred ecccccccccCCccccCCCCccEEeccccc-ccc-ccCCcccc-----cccccceEEecCceecccCCc--cccCCCCCc
Q 046598 212 TMAQNRLSGTIPSSIFNISSITGFDAGVNK-IQG-AIPLDYGF-----SLQNLQFFSVGENQLTGAIPP--TISNASNLE 282 (986)
Q Consensus 212 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~-l~~-~~p~~~~~-----~l~~L~~L~L~~N~l~~~~p~--~l~~l~~L~ 282 (986)
+|++|++.+.+|..++++++|+.|++++|+ +.+ .+|..+.. .+++|++|++++|+++ .+|. .++++++|+
T Consensus 255 ~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~ 333 (636)
T 4eco_A 255 EVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLG 333 (636)
T ss_dssp EEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCC
T ss_pred EecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCC
Confidence 555555555555555555555555555554 544 44444331 2366777777777777 6666 677777777
Q ss_pred EEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCCCcccccccccceEE
Q 046598 283 IFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSLPACISNLSTTLEVL 362 (986)
Q Consensus 283 ~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L 362 (986)
.|++++|+++| .+| .+..+ ++|+.|
T Consensus 334 ~L~L~~N~l~g-----------------------------------------------------~ip-~~~~l-~~L~~L 358 (636)
T 4eco_A 334 MLECLYNQLEG-----------------------------------------------------KLP-AFGSE-IKLASL 358 (636)
T ss_dssp EEECCSCCCEE-----------------------------------------------------ECC-CCEEE-EEESEE
T ss_pred EEeCcCCcCcc-----------------------------------------------------chh-hhCCC-CCCCEE
Confidence 77776666652 222 11111 345556
Q ss_pred EccCCcccccCCccccCCCC-CCEEEccCccccCcCCCcccCCC--CCCEEEccCccceeecCcccc-------c-cccc
Q 046598 363 LLDNNQIFGNIPAAIGKFVN-LQRLDMCSNRLSGTIPPAIGELQ--NLKDLRLQRNRFQGNIPPSIG-------N-LKLF 431 (986)
Q Consensus 363 ~L~~n~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~-------~-~~L~ 431 (986)
++++|+++ .+|..+..+++ |++|++++|.++ .+|..+..++ +|+.|++++|++++.+|..+. . .+|+
T Consensus 359 ~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~ 436 (636)
T 4eco_A 359 NLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVS 436 (636)
T ss_dssp ECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEE
T ss_pred ECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCC
Confidence 66666665 55555666666 666666666666 5555555543 666666666666665555544 2 2577
Q ss_pred EEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCC-------cceEEEccCCcccccCCcccc--cccc
Q 046598 432 ILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSS-------SLIVLDLSRNQLTGSIPSEVG--NLKN 502 (986)
Q Consensus 432 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~-------~L~~L~Ls~N~l~~~~p~~~~--~l~~ 502 (986)
+|+|++|++++..+..+..+++|++|+|++|+++ .+|...+.... +|+.|+|++|+|+ .+|..+. .+++
T Consensus 437 ~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~ 514 (636)
T 4eco_A 437 SINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPY 514 (636)
T ss_dssp EEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTT
T ss_pred EEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCC
Confidence 7777777777444444566788888888888888 77776555433 7888888888888 6777776 8888
Q ss_pred cchhhccCccccccCcccccCCccccEEec------ccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccc
Q 046598 503 LEILNVFGNKLKGEIPSTLGSCIKLEQLEM------QENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVK 576 (986)
Q Consensus 503 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 576 (986)
|+.|+|++|+|++ +|..+..+++|++|+| ++|++.+.+|..+..+++|+.|+|++|+| +.+|..+. ++|+
T Consensus 515 L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~ 590 (636)
T 4eco_A 515 LVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNIS 590 (636)
T ss_dssp CCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCC
T ss_pred cCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCC
Confidence 8888888888886 7888888888888888 56888889999999999999999999999 57888766 7999
Q ss_pred eeeccCCccccccCC
Q 046598 577 NLNLSNNDLEGVVPT 591 (986)
Q Consensus 577 ~l~ls~N~l~~~~p~ 591 (986)
+|+|++|++....+.
T Consensus 591 ~L~Ls~N~l~~~~~~ 605 (636)
T 4eco_A 591 VLDIKDNPNISIDLS 605 (636)
T ss_dssp EEECCSCTTCEEECT
T ss_pred EEECcCCCCccccHH
Confidence 999999988876544
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.3e-58 Score=554.53 Aligned_cols=514 Identities=18% Similarity=0.178 Sum_probs=327.6
Q ss_pred CCCCCCCCc--ceeeEecCC---------CCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhcccc
Q 046598 43 WNESSHFCQ--WRGVTCSRR---------HQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRR 111 (986)
Q Consensus 43 w~~~~~~c~--w~gv~c~~~---------~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 111 (986)
|.+..+.|. +..|.|... ...++.|||++|.+++..|..|+++++|++|+|++|++.+..|.+|+++++
T Consensus 3 ~~~~~C~~~~~~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 82 (606)
T 3t6q_A 3 SSDQKCIEKEVNKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHR 82 (606)
T ss_dssp ---CCCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTT
T ss_pred cccCceecccCCceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccc
Confidence 444444453 566888653 246888999999998877888999999999999999998888888999999
Q ss_pred CceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccC
Q 046598 112 LQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSG 191 (986)
Q Consensus 112 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 191 (986)
|++|+|++|++++..|..|+.+++|++|+|++|++++..|..|+++++|++|+|++|++++..+..+.++++|++|+|++
T Consensus 83 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 162 (606)
T 3t6q_A 83 LDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQN 162 (606)
T ss_dssp CCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCS
T ss_pred cCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEccc
Confidence 99999999999888888899999999999999999877778888999999999999998875545555688999999999
Q ss_pred CcccCcCcchhhccCCCc--eeecccccccccCCccccCCCCccEEecccccccc-------------------------
Q 046598 192 NNLEGSIPDTLGWLKNLV--NLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQG------------------------- 244 (986)
Q Consensus 192 N~l~~~~p~~~~~l~~L~--~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~------------------------- 244 (986)
|++++..|..|+.+++|+ .|++++|++++..|..+. ..+|+.|+++.|....
T Consensus 163 n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~-~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~ 241 (606)
T 3t6q_A 163 NAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFD-SAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDE 241 (606)
T ss_dssp SCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTT-TCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCC
T ss_pred CcccccChhhhhhhcccceeEEecCCCccCccChhHhh-hccccccccCCchhHHHHhhhccccchhheechhhcccccc
Confidence 999887888888898888 888999999876665544 4678888888775210
Q ss_pred ccCCccccccc--ccceEEecCceecccCCccccCCCCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCc
Q 046598 245 AIPLDYGFSLQ--NLQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDL 322 (986)
Q Consensus 245 ~~p~~~~~~l~--~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l 322 (986)
.++...+.++. +|+.|++++|.+++..+..|+.+++|+.|++++|+++.+++.
T Consensus 242 ~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~------------------------- 296 (606)
T 3t6q_A 242 DISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPSG------------------------- 296 (606)
T ss_dssp CCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCSS-------------------------
T ss_pred ccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCCChh-------------------------
Confidence 11111111121 455555555555555555555555555555555555533322
Q ss_pred ccccccccccccceeeccccccccCCCcccccccccceEEEccCCcccccCCc-cccCCCCCCEEEccCccccCcC--CC
Q 046598 323 NFLCSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPA-AIGKFVNLQRLDMCSNRLSGTI--PP 399 (986)
Q Consensus 323 ~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~--~~ 399 (986)
+..+++|+.|+++.|.+.+..|..+..+ ++|+.|++++|.+.+.+|. .+..+++|++|++++|.+++.. +.
T Consensus 297 -----l~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 370 (606)
T 3t6q_A 297 -----LVGLSTLKKLVLSANKFENLCQISASNF-PSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNL 370 (606)
T ss_dssp -----CCSCTTCCEEECTTCCCSBGGGGCGGGC-TTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTT
T ss_pred -----hcccccCCEEECccCCcCcCchhhhhcc-CcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcch
Confidence 2333445555555555554444444443 4555666666655544333 3555666666666666655443 45
Q ss_pred cccCCCCCCEEEccCccceeecCcccccc-cccEEEecccccCCCCCcc-cCCCCCCCeeecCCCccCCCCCcccccCCC
Q 046598 400 AIGELQNLKDLRLQRNRFQGNIPPSIGNL-KLFILYLSYNFLQGSIPSS-LGRYETLTTIDLSNNNLTGTIPPQFIGLSS 477 (986)
Q Consensus 400 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~ 477 (986)
.+..+++|++|++++|++.+..|..+... +|++|++++|.+++..|.. +..+++|++|++++|++++..|.. ++.++
T Consensus 371 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-~~~l~ 449 (606)
T 3t6q_A 371 QLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQL-FDGLP 449 (606)
T ss_dssp TTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTT-TTTCT
T ss_pred hcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHH-HhCCC
Confidence 55556666666666666655555555433 3556666666555544332 555555666666666555333332 44555
Q ss_pred cceEEEccCCccccc---CCcccccccccchhhccCccccccCcccccCCccccEEecccccccccCCccccCCCCCCEE
Q 046598 478 SLIVLDLSRNQLTGS---IPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVL 554 (986)
Q Consensus 478 ~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 554 (986)
+|++|++++|++++. .+..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++.+|..+..+++| .|
T Consensus 450 ~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L 528 (606)
T 3t6q_A 450 ALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YL 528 (606)
T ss_dssp TCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EE
T ss_pred CCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EE
Confidence 566666666655541 12345555556666666666555555555555666666666666655555555555555 56
Q ss_pred eCCCccCcccCchhhhcccccceeeccCCccccccC
Q 046598 555 DLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVP 590 (986)
Q Consensus 555 ~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 590 (986)
+|++|++++..|..+..+++|++|++++|+++|..+
T Consensus 529 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 529 NLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp ECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred ECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 666666655555555555556666666666555444
No 6
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=6.8e-58 Score=560.02 Aligned_cols=485 Identities=20% Similarity=0.206 Sum_probs=307.3
Q ss_pred cCcCCCHhHHHHHHHHHHhccCCCcCCCCCCCCCC-----CC--Ccc------------eeeEecCCCCeEEEEeccCCC
Q 046598 13 STVAGNETDRLALLELKSKITHDPLGVLASWNESS-----HF--CQW------------RGVTCSRRHQRVTILDLESLK 73 (986)
Q Consensus 13 ~~~~~~~~~~~~ll~~k~~~~~~~~~~l~~w~~~~-----~~--c~w------------~gv~c~~~~~~v~~l~l~~~~ 73 (986)
.+.++..+|++||++||+++. +| +|+.+. +| |.| .||+|+. ++||+.|+|++++
T Consensus 262 ~~~~~~~~d~~ALl~~k~~l~-~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~ 334 (876)
T 4ecn_A 262 KETAEYIKDYKALKAIWEALD-GK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFG 334 (876)
T ss_dssp CCCCHHHHHHHHHHHHHHHTT-GG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTC
T ss_pred cccccchHHHHHHHHHHHHcC-CC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCC
Confidence 344556789999999999994 65 786543 55 999 9999987 6899999999999
Q ss_pred CccccCcCccCCCCCCEEEc-cCCCccccCCcchh---------------------------------------------
Q 046598 74 LAGSISPHVGNLSFLKVLRL-YNNSFNHEIPSEFD--------------------------------------------- 107 (986)
Q Consensus 74 l~~~~~~~~~~l~~L~~L~L-~~n~l~~~~p~~~~--------------------------------------------- 107 (986)
+.|.+|++|++|++|++|+| ++|.+.|..|..-.
T Consensus 335 L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~ 414 (876)
T 4ecn_A 335 AKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEM 414 (876)
T ss_dssp CEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTS
T ss_pred CCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccc
Confidence 99999999999999999999 89988877442211
Q ss_pred ------ccccCceeecee--cccCCCCccchhcCccccceecccccccC-----------------ccCcccc--CCCCC
Q 046598 108 ------RLRRLQVLALHY--NSIGGAIPANISSCSNLIQLRLFHNQLVG-----------------KIPSELS--SLSKI 160 (986)
Q Consensus 108 ------~l~~L~~L~L~~--N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~L 160 (986)
....++.+.++. |++++ +|..|+++++|++|+|++|.|++ .+|..++ ++++|
T Consensus 415 ~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L 493 (876)
T 4ecn_A 415 KPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDL 493 (876)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTC
T ss_pred cccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCC
Confidence 111233333333 66665 66677777777777777777776 2666665 67777
Q ss_pred CeEEccCCcCCCCcccccCCCcCcceeeccCCc-ccC-cCcchhhccC-------CCceeecccccccccCCc--cccCC
Q 046598 161 EHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNN-LEG-SIPDTLGWLK-------NLVNLTMAQNRLSGTIPS--SIFNI 229 (986)
Q Consensus 161 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~p~--~l~~l 229 (986)
++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..++.++ +|++|+|++|+++ .+|. .+.++
T Consensus 494 ~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L 572 (876)
T 4ecn_A 494 TDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKM 572 (876)
T ss_dssp CEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTC
T ss_pred CEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcC
Confidence 777777777666777777777777777777776 666 5666666555 6777777777776 6666 66666
Q ss_pred CCccEEeccccccccccCCcccccccccceEEecCceecccCCccccCCCC-CcEEecccccccCCCchhhhhhhHhhhh
Q 046598 230 SSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASN-LEIFHGSVNKLTGAAPYLEKLQRLLVFG 308 (986)
Q Consensus 230 ~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~ls~N~l~~~~~~l~~l~~L~~l~ 308 (986)
++|+.|++++|.+. .+| .+..+++|+.|+|++|+++ .+|..+.++++ |+.|++++|+++.++
T Consensus 573 ~~L~~L~Ls~N~l~-~lp--~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~lp------------- 635 (876)
T 4ecn_A 573 VKLGLLDCVHNKVR-HLE--AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYIP------------- 635 (876)
T ss_dssp TTCCEEECTTSCCC-BCC--CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSCC-------------
T ss_pred CCCCEEECCCCCcc-cch--hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCCcCc-------------
Confidence 66666666666666 566 3345666666666666666 56666666666 666666666655332
Q ss_pred hccCCCCCCCCCCcccccccccccccceeeccccccccCCCccccccc-ccceEEEccCCcccccCCccc---c--CCCC
Q 046598 309 ILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSLPACISNLS-TTLEVLLLDNNQIFGNIPAAI---G--KFVN 382 (986)
Q Consensus 309 l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~-~~L~~L~L~~n~l~~~~~~~~---~--~l~~ 382 (986)
..+.... .+|+.|+|++|++.+.+|... . .+++
T Consensus 636 -----------------------------------------~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~ 674 (876)
T 4ecn_A 636 -----------------------------------------NIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGIN 674 (876)
T ss_dssp -----------------------------------------SCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCC
T ss_pred -----------------------------------------hhhhccccCCCCEEECcCCcCCCccccchhhhccccCCC
Confidence 2222111 235666666666665544221 2 2346
Q ss_pred CCEEEccCccccCcCCCc-ccCCCCCCEEEccCccceeecCcccccccccEEEecccccCCCCCcccCCCCCCCeeecCC
Q 046598 383 LQRLDMCSNRLSGTIPPA-IGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSYNFLQGSIPSSLGRYETLTTIDLSN 461 (986)
Q Consensus 383 L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 461 (986)
|+.|+|++|.++ .+|.. +..+++|+.|+|++|+|+...+..+... +..+.++++|+.|+|++
T Consensus 675 L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~----------------~~~l~nl~~L~~L~Ls~ 737 (876)
T 4ecn_A 675 ASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIPENSLKPK----------------DGNYKNTYLLTTIDLRF 737 (876)
T ss_dssp EEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCT----------------TSCCTTGGGCCEEECCS
T ss_pred cCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCccChHHhccc----------------cccccccCCccEEECCC
Confidence 777777777777 34443 3466777777777777662222222211 00122333666666666
Q ss_pred CccCCCCCcccc-cCCCcceEEEccCCcccccCCcccccccccchhhccC------ccccccCcccccCCccccEEeccc
Q 046598 462 NNLTGTIPPQFI-GLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFG------NKLKGEIPSTLGSCIKLEQLEMQE 534 (986)
Q Consensus 462 N~l~~~ip~~~~-~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~L~~ 534 (986)
|+|+ .+|..+. ..+++|+.|+|++|+|++ +|..+..+++|+.|+|++ |++.+.+|..|..+++|+.|+|++
T Consensus 738 N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~ 815 (876)
T 4ecn_A 738 NKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGS 815 (876)
T ss_dssp SCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCS
T ss_pred CCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCC
Confidence 6666 5665533 255666666666666664 566666666666666655 566666666666666666666666
Q ss_pred ccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccc
Q 046598 535 NFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLE 586 (986)
Q Consensus 535 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 586 (986)
|+| +.+|..+. ++|+.|||++|++....+..+.....+..+.|++|++.
T Consensus 816 N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 816 NDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp SCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred CCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 666 35555544 46666666666665555555554444555555555443
No 7
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=6.6e-57 Score=562.89 Aligned_cols=520 Identities=20% Similarity=0.176 Sum_probs=397.9
Q ss_pred CcceeeEecCCCCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccC-CcchhccccCceeeceecccCCCCcc
Q 046598 50 CQWRGVTCSRRHQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEI-PSEFDRLRRLQVLALHYNSIGGAIPA 128 (986)
Q Consensus 50 c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~ 128 (986)
|.|++|.+ ...+++.|||++|.+++..+.+|.++++|++|+|++|.+.+.+ |.+|+++++|++|+|++|.+++..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 46777776 4467899999999999888899999999999999999666555 78899999999999999999988899
Q ss_pred chhcCccccceecccccccCccCcc--ccCCCCCCeEEccCCcCCCCcc-cccCCCcCcceeeccCCcccCcCcchhhcc
Q 046598 129 NISSCSNLIQLRLFHNQLVGKIPSE--LSSLSKIEHISVNDNNLTGSIP-SSLGNLSSIRSLFLSGNNLEGSIPDTLGWL 205 (986)
Q Consensus 129 ~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 205 (986)
.|+++++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..|..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 9999999999999999999876665 8999999999999999987655 578999999999999999998888999888
Q ss_pred --CCCceeecccccccccCCccccCCCC------ccEEeccccccccccCCccccc--ccccceEEecC---------ce
Q 046598 206 --KNLVNLTMAQNRLSGTIPSSIFNISS------ITGFDAGVNKIQGAIPLDYGFS--LQNLQFFSVGE---------NQ 266 (986)
Q Consensus 206 --~~L~~L~L~~N~l~~~~p~~l~~l~~------L~~L~l~~N~l~~~~p~~~~~~--l~~L~~L~L~~---------N~ 266 (986)
++|+.|+|++|.+++..|..+..+.+ |+.|+++.|.+.+.+|..+... ..+++.|.++. |.
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 89999999999999888888777665 8999999998888777665432 24566776663 33
Q ss_pred ecccCCccccCC--CCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeecccccc
Q 046598 267 LTGAIPPTISNA--SNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNF 344 (986)
Q Consensus 267 l~~~~p~~l~~l--~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~ 344 (986)
+.+..+..|..+ ++|+.|++++|.+++..+ ..+..+++|+.|+++.|.+
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~-----------------------------~~~~~l~~L~~L~L~~n~i 302 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNS-----------------------------RVFETLKDLKVLNLAYNKI 302 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECS-----------------------------CCSSSCCCCCEEEEESCCC
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccCh-----------------------------hhhhcCCCCCEEECCCCcC
Confidence 333334445554 677778877777765433 1345566777777777777
Q ss_pred ccCCCcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcc
Q 046598 345 GGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPS 424 (986)
Q Consensus 345 ~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 424 (986)
++..|..+..+ ++|+.|+|++|++++..|..|..+++|++|++++|.+++..+..|..+++|+.|+|++|.+++...
T Consensus 303 ~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~-- 379 (844)
T 3j0a_A 303 NKIADEAFYGL-DNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHF-- 379 (844)
T ss_dssp CEECTTTTTTC-SSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSS--
T ss_pred CCCChHHhcCC-CCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccC--
Confidence 76666666555 578888888888877777788888888888888888877777778888888888888888774322
Q ss_pred cccccccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCc-cccccccc
Q 046598 425 IGNLKLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPS-EVGNLKNL 503 (986)
Q Consensus 425 ~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~-~~~~l~~L 503 (986)
..+|+.|++++|+++ .+|.. ..+++.|++++|++++.-...++..+++|+.|+|++|++++..+. .+..+++|
T Consensus 380 --~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L 453 (844)
T 3j0a_A 380 --IPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSL 453 (844)
T ss_dssp --CCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTC
T ss_pred --CCCcchhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCcc
Confidence 335778888888887 44543 456778888888887432233345677888888888888754332 35567788
Q ss_pred chhhccCcccc-----ccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhccccccee
Q 046598 504 EILNVFGNKLK-----GEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNL 578 (986)
Q Consensus 504 ~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l 578 (986)
+.|+|++|.++ +..+..|..+++|+.|+|++|+|++.+|..|..+++|+.|+|++|+|++..|..+. ++|+.|
T Consensus 454 ~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L 531 (844)
T 3j0a_A 454 EQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEIL 531 (844)
T ss_dssp CBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEE
T ss_pred ccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEE
Confidence 88888888876 34455677788888888888888877777788888888888888888876666555 778888
Q ss_pred eccCCccccccCCccccccccceeeeCCcccccCC
Q 046598 579 NLSNNDLEGVVPTQGVFKNASITSVFGNLKLCGGI 613 (986)
Q Consensus 579 ~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lcg~~ 613 (986)
+|++|+|++.+|.. +..+..+++.|||+.|++.
T Consensus 532 ~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 532 DISRNQLLAPNPDV--FVSLSVLDITHNKFICECE 564 (844)
T ss_dssp EEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSS
T ss_pred ECCCCcCCCCChhH--hCCcCEEEecCCCcccccc
Confidence 88888888877754 5677777888888888654
No 8
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.5e-56 Score=547.27 Aligned_cols=522 Identities=21% Similarity=0.226 Sum_probs=461.0
Q ss_pred CeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceec
Q 046598 62 QRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRL 141 (986)
Q Consensus 62 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 141 (986)
.+++.|||++|.+++..|..|+++++|++|+|++|++++..+.+|+++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 46899999999999988999999999999999999999777778999999999999999999888889999999999999
Q ss_pred ccccccCccCccccCCCCCCeEEccCCcCCCCcccccC--CCcCcceeeccCCcccCcCcchhhcc--------------
Q 046598 142 FHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLG--NLSSIRSLFLSGNNLEGSIPDTLGWL-------------- 205 (986)
Q Consensus 142 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l-------------- 205 (986)
++|.+++..|..|+++++|++|++++|++++..+..+. ++++|++|++++|++++..|..|..+
T Consensus 129 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~ 208 (680)
T 1ziw_A 129 SHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLG 208 (680)
T ss_dssp CSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCH
T ss_pred CCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccC
Confidence 99999999999999999999999999999988887765 56899999999999998888877654
Q ss_pred -------------CCCceeecccccccccCCccccCCCC--ccEEeccccccccccCCcccccccccceEEecCceeccc
Q 046598 206 -------------KNLVNLTMAQNRLSGTIPSSIFNISS--ITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGA 270 (986)
Q Consensus 206 -------------~~L~~L~L~~N~l~~~~p~~l~~l~~--L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~ 270 (986)
++|++|++++|++++..|..+.+++. |+.|++++|.+.+..|.. +..+++|++|++++|++++.
T Consensus 209 ~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~ 287 (680)
T 1ziw_A 209 PSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDS-FAWLPQLEYFFLEYNNIQHL 287 (680)
T ss_dssp HHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTT-TTTCTTCCEEECCSCCBSEE
T ss_pred hhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCccc-ccCcccccEeeCCCCccCcc
Confidence 56788899999999999999998865 999999999999766554 45799999999999999999
Q ss_pred CCccccCCCCCcEEecccccccC------CCc----hhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeecc
Q 046598 271 IPPTISNASNLEIFHGSVNKLTG------AAP----YLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLIN 340 (986)
Q Consensus 271 ~p~~l~~l~~L~~L~ls~N~l~~------~~~----~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~ 340 (986)
.|..|.++++|+.|++++|...+ ++. .+..+++|+.+++++|.+...... .+.++++|+.++++
T Consensus 288 ~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L~Ls 361 (680)
T 1ziw_A 288 FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSN------MFTGLINLKYLSLS 361 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTT------TTTTCTTCCEEECT
T ss_pred ChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChh------HhccccCCcEEECC
Confidence 99999999999999999876553 222 567889999999999999875543 46678899999999
Q ss_pred ccccccC-CCccc-ccc-cccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCC-CcccCCCCCCEEEccCcc
Q 046598 341 INNFGGS-LPACI-SNL-STTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIP-PAIGELQNLKDLRLQRNR 416 (986)
Q Consensus 341 ~n~~~~~-~p~~~-~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~ 416 (986)
.|.+.+. ++... ..+ ...|+.|++++|++++..|.+|..+++|+.|++++|.+++.+| ..|..+++|++|++++|+
T Consensus 362 ~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~ 441 (680)
T 1ziw_A 362 NSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNK 441 (680)
T ss_dssp TCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCS
T ss_pred CCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCC
Confidence 9986543 33222 222 1479999999999999999999999999999999999987666 689999999999999999
Q ss_pred ceeecCcccccc-cccEEEecccccC--CCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccC
Q 046598 417 FQGNIPPSIGNL-KLFILYLSYNFLQ--GSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSI 493 (986)
Q Consensus 417 l~~~~~~~~~~~-~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~ 493 (986)
+.+..+..+... +|+.|++++|.+. +.+|..|..+++|++|+|++|+|+ .+|+..+..+++|++|+|++|++++..
T Consensus 442 l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~~~ 520 (680)
T 1ziw_A 442 YLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIA-NINDDMLEGLEKLEILDLQHNNLARLW 520 (680)
T ss_dssp EEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCGGGG
T ss_pred cceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCC-cCChhhhccccccCEEeCCCCCccccc
Confidence 999888888765 5999999999997 678999999999999999999999 666666888999999999999998642
Q ss_pred C--------cccccccccchhhccCccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccC
Q 046598 494 P--------SEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKI 565 (986)
Q Consensus 494 p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 565 (986)
+ ..|.++++|+.|+|++|+++...+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..
T Consensus 521 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~ 600 (680)
T 1ziw_A 521 KHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVE 600 (680)
T ss_dssp STTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCC
T ss_pred hhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccC
Confidence 2 23789999999999999999554567999999999999999999877788899999999999999999988
Q ss_pred chhhh-cccccceeeccCCccccccCC
Q 046598 566 PELLI-RLQLVKNLNLSNNDLEGVVPT 591 (986)
Q Consensus 566 p~~~~-~l~~L~~l~ls~N~l~~~~p~ 591 (986)
|..+. .+++|+.|++++|++.|..+.
T Consensus 601 ~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 601 KKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp HHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred hhHhcccccccCEEEccCCCcccCCcc
Confidence 88888 899999999999999998875
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.2e-56 Score=538.96 Aligned_cols=512 Identities=19% Similarity=0.161 Sum_probs=295.5
Q ss_pred CeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceec
Q 046598 62 QRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRL 141 (986)
Q Consensus 62 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 141 (986)
.+++.|||++|.+++..+..|+++++|++|+|++|++++..|.+|+++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 34555666666665555555666666666666666665555555666666666666666666555556666666666666
Q ss_pred ccccccCccCccccCCCCCCeEEccCCcCCC-CcccccCCCcCcceeeccCCcccCcCcchhhccCCCc----eeecccc
Q 046598 142 FHNQLVGKIPSELSSLSKIEHISVNDNNLTG-SIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLV----NLTMAQN 216 (986)
Q Consensus 142 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~L~~N 216 (986)
++|++++..|..|+++++|++|++++|.+++ .+|..|+++++|++|+|++|++++..|..|+.+++|+ +|++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 6666655554556666666666666666554 3455566666666666666666555555555555444 4666666
Q ss_pred cccccCCccccCCCCccEEeccccccccccCCcccccccccceEEecCceeccc------CCccccCCC--CCcEEec-c
Q 046598 217 RLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGA------IPPTISNAS--NLEIFHG-S 287 (986)
Q Consensus 217 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~------~p~~l~~l~--~L~~L~l-s 287 (986)
++++..+.. +...+|+.|++++|.+.+........++++|+.+++..+.+.+. .+..+..+. .++.+++ .
T Consensus 192 ~l~~~~~~~-~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 270 (606)
T 3vq2_A 192 PIDFIQDQA-FQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY 270 (606)
T ss_dssp CCCEECTTT-TTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECC
T ss_pred CcceeCccc-ccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccc
Confidence 665333332 23335566666665554333333333455555555543332211 111111111 2333333 4
Q ss_pred cccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCCCcccccccccceEEEccCC
Q 046598 288 VNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNN 367 (986)
Q Consensus 288 ~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n 367 (986)
.|.+++..+.+..+++|+.+++.+|.+...+ .+..+++|+.|+++.|.+ +.+|. + . .++|+.|++++|
T Consensus 271 ~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~--------~l~~~~~L~~L~l~~n~l-~~lp~-~-~-l~~L~~L~l~~n 338 (606)
T 3vq2_A 271 TNDFSDDIVKFHCLANVSAMSLAGVSIKYLE--------DVPKHFKWQSLSIIRCQL-KQFPT-L-D-LPFLKSLTLTMN 338 (606)
T ss_dssp CTTCCGGGGSCGGGTTCSEEEEESCCCCCCC--------CCCTTCCCSEEEEESCCC-SSCCC-C-C-CSSCCEEEEESC
T ss_pred cccccccccccccCCCCCEEEecCccchhhh--------hccccccCCEEEcccccC-ccccc-C-C-CCccceeeccCC
Confidence 5555555555666666666666666554322 344556666666666666 56663 2 2 356666666666
Q ss_pred cccccCCccccCCCCCCEEEccCccccCc--CCCcccCCCCCCEEEccCccceeecCcccccc-cccEEEecccccCCCC
Q 046598 368 QIFGNIPAAIGKFVNLQRLDMCSNRLSGT--IPPAIGELQNLKDLRLQRNRFQGNIPPSIGNL-KLFILYLSYNFLQGSI 444 (986)
Q Consensus 368 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~L~~L~L~~N~l~~~~ 444 (986)
...+.. .+..+++|++|++++|.+++. .|..+..+++|++|++++|.+++. |..+..+ +|++|++++|++.+..
T Consensus 339 ~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~ 415 (606)
T 3vq2_A 339 KGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIM-SANFMGLEELQHLDFQHSTLKRVT 415 (606)
T ss_dssp SSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEE-CCCCTTCTTCCEEECTTSEEESTT
T ss_pred cCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccc-hhhccCCCCCCeeECCCCccCCcc
Confidence 444333 455666666666666666644 256666666666666666666643 3444333 4666666666666665
Q ss_pred C-cccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccc-cCCcccccccccchhhccCccccccCccccc
Q 046598 445 P-SSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTG-SIPSEVGNLKNLEILNVFGNKLKGEIPSTLG 522 (986)
Q Consensus 445 p-~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 522 (986)
| ..+..+++|++|++++|++++.+|.. ++.+++|+.|++++|++++ .+|..|..+++|+.|+|++|++++..|..|.
T Consensus 416 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 494 (606)
T 3vq2_A 416 EFSAFLSLEKLLYLDISYTNTKIDFDGI-FLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFD 494 (606)
T ss_dssp TTTTTTTCTTCCEEECTTSCCEECCTTT-TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred ChhhhhccccCCEEECcCCCCCccchhh-hcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhc
Confidence 5 45666666666666666666444444 5556666666666666665 3566666666666666666666666666666
Q ss_pred CCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhccc-ccceeeccCCccccccCC
Q 046598 523 SCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQ-LVKNLNLSNNDLEGVVPT 591 (986)
Q Consensus 523 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~l~ls~N~l~~~~p~ 591 (986)
++++|++|+|++|++++.+|..|..+++|+.|+|++|+|+ .+|..+..++ +|++|++++|++.|..+.
T Consensus 495 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 495 TLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp TCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred ccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 6666666666666666666666666666666666666666 4555566665 466666666666665554
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.5e-56 Score=537.60 Aligned_cols=534 Identities=18% Similarity=0.150 Sum_probs=453.5
Q ss_pred EEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceeccccc
Q 046598 66 ILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQ 145 (986)
Q Consensus 66 ~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 145 (986)
.+|.++++++ .+|..+. +.|++|+|++|++++..+.+|.++++|++|+|++|++++..|..|+++++|++|+|++|.
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 4666777777 6777665 889999999999999999999999999999999999998889999999999999999999
Q ss_pred ccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccC-cCcchhhccCCCceeecccccccccCCc
Q 046598 146 LVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEG-SIPDTLGWLKNLVNLTMAQNRLSGTIPS 224 (986)
Q Consensus 146 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 224 (986)
+++..|.+|+++++|++|+|++|++++..+..|+++++|++|+|++|++++ .+|..|+.+++|++|+|++|++++..|.
T Consensus 92 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 92 IQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred ccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 998889999999999999999999998888899999999999999999986 5799999999999999999999998888
Q ss_pred cccCCCCcc----EEeccccccccccCCcccccccccceEEecCceec-ccCCccccCCCCCcEEecccccccCCCch--
Q 046598 225 SIFNISSIT----GFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLT-GAIPPTISNASNLEIFHGSVNKLTGAAPY-- 297 (986)
Q Consensus 225 ~l~~l~~L~----~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~ls~N~l~~~~~~-- 297 (986)
.+..+++|+ .|+++.|.+.+ +|...+.. .+|+.|++++|.++ +..|..+.++++|+.+++..+.+......
T Consensus 172 ~~~~l~~L~~~l~~L~l~~n~l~~-~~~~~~~~-~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~ 249 (606)
T 3vq2_A 172 DLQFLRENPQVNLSLDMSLNPIDF-IQDQAFQG-IKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEI 249 (606)
T ss_dssp TTHHHHHCTTCCCEEECTTCCCCE-ECTTTTTT-CEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSC
T ss_pred hhhhhhccccccceeeccCCCcce-eCcccccC-ceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccc
Confidence 888887765 89999999984 45555533 48999999999997 56788999999999999887766542210
Q ss_pred --hhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCCCcccccccccceEEEccCCcccccCCc
Q 046598 298 --LEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPA 375 (986)
Q Consensus 298 --l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~ 375 (986)
-..+..+..+.+....+...... ......+..+++|+.++++.|.+. .+| .+..+ ++|+.|++++|++ +.+|
T Consensus 250 ~~~~~~~~l~~l~l~~l~l~~~~~~-~~~~~~~~~l~~L~~L~l~~~~~~-~l~-~l~~~-~~L~~L~l~~n~l-~~lp- 323 (606)
T 3vq2_A 250 FEPSIMEGLCDVTIDEFRLTYTNDF-SDDIVKFHCLANVSAMSLAGVSIK-YLE-DVPKH-FKWQSLSIIRCQL-KQFP- 323 (606)
T ss_dssp CCGGGGTTGGGSEEEEEEECCCTTC-CGGGGSCGGGTTCSEEEEESCCCC-CCC-CCCTT-CCCSEEEEESCCC-SSCC-
T ss_pred cChHHhhhhhhccHhheeccccccc-cccccccccCCCCCEEEecCccch-hhh-hcccc-ccCCEEEcccccC-cccc-
Confidence 11122222222222211111100 112233778889999999999985 566 55554 6899999999999 5778
Q ss_pred cccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeec--Ccccccc-cccEEEecccccCCCCCcccCCCC
Q 046598 376 AIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNI--PPSIGNL-KLFILYLSYNFLQGSIPSSLGRYE 452 (986)
Q Consensus 376 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~~-~L~~L~L~~N~l~~~~p~~~~~l~ 452 (986)
.+ .+++|++|++++|...+.. .+..+++|++|++++|++++.. |..+... +|++|++++|.+++ +|..+..++
T Consensus 324 ~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~ 399 (606)
T 3vq2_A 324 TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLE 399 (606)
T ss_dssp CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCT
T ss_pred cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCC
Confidence 55 9999999999999665444 6789999999999999999773 6666544 69999999999995 678999999
Q ss_pred CCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccc-cCcccccCCccccEEe
Q 046598 453 TLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKG-EIPSTLGSCIKLEQLE 531 (986)
Q Consensus 453 ~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~ 531 (986)
+|+.|++++|++.+..|...+..+++|+.|++++|++++..|..+..+++|++|+|++|++++ .+|..|+.+++|++|+
T Consensus 400 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 479 (606)
T 3vq2_A 400 ELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLD 479 (606)
T ss_dssp TCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEE
Confidence 999999999999977664568889999999999999999899999999999999999999997 4789999999999999
Q ss_pred cccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCCccccc-cccceeeeCCcccc
Q 046598 532 MQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPTQGVFK-NASITSVFGNLKLC 610 (986)
Q Consensus 532 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~-~~~~~~~~~n~~lc 610 (986)
|++|++++.+|..|..+++|++|+|++|++++.+|..+..+++|++|+|++|+++..++....++ +++.+++.+||+.|
T Consensus 480 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c 559 (606)
T 3vq2_A 480 LSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVAC 559 (606)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCC
T ss_pred CCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCccc
Confidence 99999999999999999999999999999999999999999999999999999997766655665 58999999999999
Q ss_pred cCCC
Q 046598 611 GGIP 614 (986)
Q Consensus 611 g~~~ 614 (986)
+++.
T Consensus 560 ~c~~ 563 (606)
T 3vq2_A 560 ICEH 563 (606)
T ss_dssp SSTT
T ss_pred CCcc
Confidence 8753
No 11
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=7.2e-53 Score=509.56 Aligned_cols=531 Identities=21% Similarity=0.197 Sum_probs=464.4
Q ss_pred EEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceeccccc
Q 046598 66 ILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQ 145 (986)
Q Consensus 66 ~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 145 (986)
.+|.++.+++ .+|..+.. .+++|+|++|.+++..|.+|+++++|++|+|++|++++..|..|+++++|++|+|++|+
T Consensus 16 ~~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 16 TYNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp EEECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 5778888887 67776654 78999999999999999999999999999999999999899999999999999999999
Q ss_pred ccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceeecccccccccCCcc
Q 046598 146 LVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSS 225 (986)
Q Consensus 146 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 225 (986)
+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..+..+..+++|++|+|++|++++..|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 99889999999999999999999999887899999999999999999999755455556999999999999999888999
Q ss_pred ccCCCCcc--EEeccccccccccCCcccccccccceEEecCceecccCCccccCCCCCcEEecccccccCC-----C-ch
Q 046598 226 IFNISSIT--GFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLTGA-----A-PY 297 (986)
Q Consensus 226 l~~l~~L~--~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~-----~-~~ 297 (986)
+..+++|+ .|++++|.+.+..|..+ ...+|+.|++++|. ..+..+..+.++....+..+.+... . ..
T Consensus 173 ~~~l~~L~~l~L~l~~n~l~~~~~~~~--~~~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~ 247 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGNDIAGIEPGAF--DSAVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAV 247 (606)
T ss_dssp HHTTTTCCSEEEECTTCCCCEECTTTT--TTCEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGG
T ss_pred hhhhcccceeEEecCCCccCccChhHh--hhccccccccCCch---hHHHHhhhccccchhheechhhccccccccChhH
Confidence 99999999 89999999998776654 35789999999987 3345555666665555444333221 1 12
Q ss_pred hhhhh--hHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCCCcccccccccceEEEccCCcccccCCc
Q 046598 298 LEKLQ--RLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPA 375 (986)
Q Consensus 298 l~~l~--~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~ 375 (986)
+..+. +++.+++.+|.+...... .+..+++|+.|+++.|.++ .+|..+..+ ++|++|++++|++.+..|.
T Consensus 248 ~~~l~~~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L~l~~n~l~-~lp~~l~~l-~~L~~L~l~~n~l~~~~~~ 319 (606)
T 3t6q_A 248 FEGLCEMSVESINLQKHYFFNISSN------TFHCFSGLQELDLTATHLS-ELPSGLVGL-STLKKLVLSANKFENLCQI 319 (606)
T ss_dssp GGGGGGSEEEEEECTTCCCSSCCTT------TTTTCTTCSEEECTTSCCS-CCCSSCCSC-TTCCEEECTTCCCSBGGGG
T ss_pred hchhhcCceeEEEeecCccCccCHH------HhccccCCCEEeccCCccC-CCChhhccc-ccCCEEECccCCcCcCchh
Confidence 33333 577788888877665543 3667889999999999998 789888776 6899999999999998899
Q ss_pred cccCCCCCCEEEccCccccCcCCC-cccCCCCCCEEEccCccceeec--Ccccccc-cccEEEecccccCCCCCcccCCC
Q 046598 376 AIGKFVNLQRLDMCSNRLSGTIPP-AIGELQNLKDLRLQRNRFQGNI--PPSIGNL-KLFILYLSYNFLQGSIPSSLGRY 451 (986)
Q Consensus 376 ~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~~-~L~~L~L~~N~l~~~~p~~~~~l 451 (986)
.+..+++|++|++++|.+.+.+|. .|..+++|++|++++|++++.. +..+..+ +|++|++++|.+.+..|..|..+
T Consensus 320 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 399 (606)
T 3t6q_A 320 SASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKEC 399 (606)
T ss_dssp CGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTC
T ss_pred hhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCC
Confidence 999999999999999999876665 5999999999999999999876 6666655 69999999999999999999999
Q ss_pred CCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCcccccc---CcccccCCcccc
Q 046598 452 ETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGE---IPSTLGSCIKLE 528 (986)
Q Consensus 452 ~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~ 528 (986)
++|++|++++|++++..|...+..+++|+.|++++|.+++..|..+..+++|++|+|++|++++. .+..+..+++|+
T Consensus 400 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~ 479 (606)
T 3t6q_A 400 PQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLE 479 (606)
T ss_dssp TTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCC
T ss_pred ccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCcc
Confidence 99999999999999777777788899999999999999988899999999999999999999873 346799999999
Q ss_pred EEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCCc-cccccccceeeeCCc
Q 046598 529 QLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPTQ-GVFKNASITSVFGNL 607 (986)
Q Consensus 529 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~ 607 (986)
+|+|++|++++.+|..|..+++|+.|+|++|++++..|+.+..++.| .|+|++|++++.+|.. ..++.++.+++.|||
T Consensus 480 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 558 (606)
T 3t6q_A 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNP 558 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCC
T ss_pred EEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCC
Confidence 99999999999999999999999999999999999999999999999 9999999999988875 567888999999999
Q ss_pred ccccCC
Q 046598 608 KLCGGI 613 (986)
Q Consensus 608 ~lcg~~ 613 (986)
+.|.+.
T Consensus 559 ~~c~c~ 564 (606)
T 3t6q_A 559 LDCTCS 564 (606)
T ss_dssp EECSGG
T ss_pred ccccCC
Confidence 999754
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-52 Score=521.30 Aligned_cols=487 Identities=20% Similarity=0.203 Sum_probs=419.3
Q ss_pred CeEEEEeccCCCCcccc-CcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccc--hhcCccccc
Q 046598 62 QRVTILDLESLKLAGSI-SPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPAN--ISSCSNLIQ 138 (986)
Q Consensus 62 ~~v~~l~l~~~~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~ 138 (986)
.+++.|||++|...+.+ |..|+++++|++|+|++|.+.+..|.+|+++++|++|+|++|.+++.+|.. |+++++|++
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~ 127 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTR 127 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCE
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCE
Confidence 46889999999887788 678999999999999999999999999999999999999999999877765 999999999
Q ss_pred eecccccccCccC-ccccCCCCCCeEEccCCcCCCCcccccCCC--cCcceeeccCCcccCcCcchhhccCC------Cc
Q 046598 139 LRLFHNQLVGKIP-SELSSLSKIEHISVNDNNLTGSIPSSLGNL--SSIRSLFLSGNNLEGSIPDTLGWLKN------LV 209 (986)
Q Consensus 139 L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~------L~ 209 (986)
|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..|..+ ++|+.|+|++|.+.+..|..++.+.+ |+
T Consensus 128 L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~ 207 (844)
T 3j0a_A 128 LDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLE 207 (844)
T ss_dssp EEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBS
T ss_pred EECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCcee
Confidence 9999999998765 589999999999999999999999999888 89999999999999988888877766 99
Q ss_pred eeecccccccccCCccccCC---CCccEEecccccc---------ccccCCccccc--ccccceEEecCceecccCCccc
Q 046598 210 NLTMAQNRLSGTIPSSIFNI---SSITGFDAGVNKI---------QGAIPLDYGFS--LQNLQFFSVGENQLTGAIPPTI 275 (986)
Q Consensus 210 ~L~L~~N~l~~~~p~~l~~l---~~L~~L~l~~N~l---------~~~~p~~~~~~--l~~L~~L~L~~N~l~~~~p~~l 275 (986)
+|+|++|++++.+|..+... ++++.++++.+.. .+..+ ..+.+ .++|+.|++++|.+++..|..|
T Consensus 208 ~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~-~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~ 286 (844)
T 3j0a_A 208 ILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQ-NTFAGLARSSVRHLDLSHGFVFSLNSRVF 286 (844)
T ss_dssp EEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGG-TTTTTTTTSCCCEEECTTCCCCEECSCCS
T ss_pred EEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCCh-hhhhccccCCccEEECCCCcccccChhhh
Confidence 99999999999888887654 5678888774332 22111 12222 3789999999999999999999
Q ss_pred cCCCCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCCCcccccc
Q 046598 276 SNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSLPACISNL 355 (986)
Q Consensus 276 ~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~ 355 (986)
..+++|+.|++++|++++.++. .+..+++|+.|+++.|.+++..|..+..+
T Consensus 287 ~~l~~L~~L~L~~n~i~~~~~~-----------------------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 337 (844)
T 3j0a_A 287 ETLKDLKVLNLAYNKINKIADE-----------------------------AFYGLDNLQVLNLSYNLLGELYSSNFYGL 337 (844)
T ss_dssp SSCCCCCEEEEESCCCCEECTT-----------------------------TTTTCSSCCEEEEESCCCSCCCSCSCSSC
T ss_pred hcCCCCCEEECCCCcCCCCChH-----------------------------HhcCCCCCCEEECCCCCCCccCHHHhcCC
Confidence 9999999999999999876542 34556778888899898887777777776
Q ss_pred cccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccccccEEEe
Q 046598 356 STTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYL 435 (986)
Q Consensus 356 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L 435 (986)
++|+.|++++|+|.+..+..|..+++|++|+|++|.+++. + .+++|+.|++++|+++. +|.. ..+++.|++
T Consensus 338 -~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-~----~~~~L~~L~l~~N~l~~-l~~~--~~~l~~L~l 408 (844)
T 3j0a_A 338 -PKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-H----FIPSIPDIFLSGNKLVT-LPKI--NLTANLIHL 408 (844)
T ss_dssp -TTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-S----SCCSCSEEEEESCCCCC-CCCC--CTTCCEEEC
T ss_pred -CCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-c----CCCCcchhccCCCCccc-cccc--ccccceeec
Confidence 6899999999999988899999999999999999999843 2 38899999999999994 4443 346899999
Q ss_pred cccccCCCCC-cccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCccc-----ccCCcccccccccchhhcc
Q 046598 436 SYNFLQGSIP-SSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLT-----GSIPSEVGNLKNLEILNVF 509 (986)
Q Consensus 436 ~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls 509 (986)
++|++++... ..+..+++|+.|+|++|++++..+...+..+++|+.|+|++|.++ +..+..|.++++|+.|+|+
T Consensus 409 s~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls 488 (844)
T 3j0a_A 409 SENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLN 488 (844)
T ss_dssp CSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCC
T ss_pred ccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECC
Confidence 9999996532 235689999999999999996655555667899999999999997 3445678999999999999
Q ss_pred CccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCcccccc
Q 046598 510 GNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVV 589 (986)
Q Consensus 510 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 589 (986)
+|+|++..|..|..+++|+.|+|++|+|++..|..+. ++|+.|||++|+|++.+|..+ .+|+.|++++|++.|..
T Consensus 489 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 489 HNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICEC 563 (844)
T ss_dssp HHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSS
T ss_pred CCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCccccc
Confidence 9999999999999999999999999999987777776 899999999999999999875 47889999999999987
Q ss_pred CCc
Q 046598 590 PTQ 592 (986)
Q Consensus 590 p~~ 592 (986)
+..
T Consensus 564 ~~~ 566 (844)
T 3j0a_A 564 ELS 566 (844)
T ss_dssp SCC
T ss_pred ccH
Confidence 643
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-51 Score=493.63 Aligned_cols=512 Identities=20% Similarity=0.192 Sum_probs=389.6
Q ss_pred CeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceec
Q 046598 62 QRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRL 141 (986)
Q Consensus 62 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 141 (986)
.+++.|||++|.+++..+.+|+++++|++|+|++|++++..|.+|+++++|++|+|++|++++..|..|+++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46788888888888777778888888888888888888777788888888888888888888777788888888888888
Q ss_pred ccccccCccCccccCCCCCCeEEccCCcCCC-CcccccCCCcCcceeeccCCcccCcCcchhhccCCC----ceeecccc
Q 046598 142 FHNQLVGKIPSELSSLSKIEHISVNDNNLTG-SIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNL----VNLTMAQN 216 (986)
Q Consensus 142 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L----~~L~L~~N 216 (986)
++|++++..+..|+++++|++|++++|.+++ .+|..|+++++|++|++++|++++..|..|+.+++| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 8888886666678888888888888888876 368888888888888888888887777788888888 78888888
Q ss_pred cccccCCccccCCCCccEEeccccccccccCCcccccccccceEEecCceec------ccCCccccCCCC--CcEEeccc
Q 046598 217 RLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLT------GAIPPTISNASN--LEIFHGSV 288 (986)
Q Consensus 217 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~------~~~p~~l~~l~~--L~~L~ls~ 288 (986)
.+++..|..+..+ +|+.|+++.|......-......+++++.+.+..+.+. ......+..+.+ ++.+++++
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 8887666666555 78888888775432211112223444444444322211 111222333332 23344444
Q ss_pred c-cccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCCCcccccccccceEEEccCC
Q 046598 289 N-KLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNN 367 (986)
Q Consensus 289 N-~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n 367 (986)
+ .+.+..+ ..+..+++|+.++++.|.+. .+|..+... +|+.|++++|
T Consensus 267 ~~~~~~~~~-----------------------------~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~--~L~~L~l~~n 314 (570)
T 2z63_A 267 LDYYLDDII-----------------------------DLFNCLTNVSSFSLVSVTIE-RVKDFSYNF--GWQHLELVNC 314 (570)
T ss_dssp TTEEESCST-----------------------------TTTGGGTTCSEEEEESCEEC-SCCBCCSCC--CCSEEEEESC
T ss_pred chhhhhhch-----------------------------hhhcCcCcccEEEecCccch-hhhhhhccC--CccEEeeccC
Confidence 4 3332221 12344556666666666665 466666665 7888888888
Q ss_pred cccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeec--Cccccc-ccccEEEecccccCCCC
Q 046598 368 QIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNI--PPSIGN-LKLFILYLSYNFLQGSI 444 (986)
Q Consensus 368 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~-~~L~~L~L~~N~l~~~~ 444 (986)
.+. .+|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|++++.. +..+.. .+|++|++++|.+.+..
T Consensus 315 ~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 389 (570)
T 2z63_A 315 KFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMS 389 (570)
T ss_dssp BCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEE
T ss_pred ccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccc
Confidence 888 4554 4788899999999988866655 77889999999999988654 444543 36999999999998655
Q ss_pred CcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCcccc-ccCcccccC
Q 046598 445 PSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLK-GEIPSTLGS 523 (986)
Q Consensus 445 p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~ 523 (986)
+. +..+++|++|++++|++++..|...+..+++|++|++++|++++..|..|..+++|++|+|++|+++ +.+|..+..
T Consensus 390 ~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~ 468 (570)
T 2z63_A 390 SN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE 468 (570)
T ss_dssp EE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT
T ss_pred cc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhc
Confidence 54 9999999999999999997666566888999999999999999989999999999999999999998 578999999
Q ss_pred CccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCCcccc-cccc--c
Q 046598 524 CIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPTQGVF-KNAS--I 600 (986)
Q Consensus 524 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~-~~~~--~ 600 (986)
+++|++|+|++|++++..|..|..+++|+.|+|++|++++..|..+..+++|++|++++|+++|.+|....+ ..+. .
T Consensus 469 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~ 548 (570)
T 2z63_A 469 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNS 548 (570)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTG
T ss_pred ccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhcc
Confidence 999999999999999988999999999999999999999988889999999999999999999999876433 2221 1
Q ss_pred eeeeCCcccccCC
Q 046598 601 TSVFGNLKLCGGI 613 (986)
Q Consensus 601 ~~~~~n~~lcg~~ 613 (986)
..+.+.+ .|..+
T Consensus 549 ~~~~~~~-~C~~~ 560 (570)
T 2z63_A 549 QKEQGSA-KCSGS 560 (570)
T ss_dssp GGEESCC-BBTTT
T ss_pred ccCCCch-hhCCC
Confidence 2344444 66554
No 14
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=7.2e-52 Score=494.73 Aligned_cols=493 Identities=20% Similarity=0.218 Sum_probs=359.1
Q ss_pred CCCcceeeEecCCCCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCc
Q 046598 48 HFCQWRGVTCSRRHQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIP 127 (986)
Q Consensus 48 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 127 (986)
-.|.|.|| |+. ++++++ .+|+.+. +.|++|+|++|++++..|.+|.++++|++|+|++|++++..|
T Consensus 2 ~~C~~~~~-c~~----------~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~ 67 (549)
T 2z81_A 2 LSCDASGV-CDG----------RSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEG 67 (549)
T ss_dssp CEECTTSE-EEC----------TTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECT
T ss_pred ccCCCCce-EEC----------CCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccCh
Confidence 35999998 854 445555 5666554 678888888888887778888888888888888888887777
Q ss_pred cchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCC-cccccCCCcCcceeeccCCcccCcC-cchhhcc
Q 046598 128 ANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGS-IPSSLGNLSSIRSLFLSGNNLEGSI-PDTLGWL 205 (986)
Q Consensus 128 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l 205 (986)
+.|+.+++|++|+|++|++++..|..|+++++|++|+|++|++++. .|..|+++++|++|++++|++.+.+ +..|..+
T Consensus 68 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l 147 (549)
T 2z81_A 68 DAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGL 147 (549)
T ss_dssp TTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC
T ss_pred hhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcc
Confidence 7888888888888888888877777788888888888888888753 5667888888888888888743344 4678888
Q ss_pred CCCceeecccccccccCCccccCCCCccEEeccccccccccCCcccccccccceEEecCceecccC--C-ccccCCCCCc
Q 046598 206 KNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAI--P-PTISNASNLE 282 (986)
Q Consensus 206 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~--p-~~l~~l~~L~ 282 (986)
++|++|+|++|++++.+|..+.++++|+.|+++.|.+. .+|..++..+++|++|++++|++++.. | .....+++|+
T Consensus 148 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~ 226 (549)
T 2z81_A 148 TSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMK 226 (549)
T ss_dssp CEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCC
T ss_pred cccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhccc
Confidence 88888888888888888888888888888888888775 455555556788888888888887642 1 2334577888
Q ss_pred EEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCC--Cc---ccccccc
Q 046598 283 IFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSL--PA---CISNLST 357 (986)
Q Consensus 283 ~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~--p~---~~~~~~~ 357 (986)
.|++++|.+++..+. .+ ...+..+.+|+.++++.|.+.+.. +. .......
T Consensus 227 ~L~l~~n~l~~~~~~--~l-----------------------~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~ 281 (549)
T 2z81_A 227 KLAFRGSVLTDESFN--EL-----------------------LKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELG 281 (549)
T ss_dssp EEEEESCEEEHHHHH--HH-----------------------HGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCT
T ss_pred ceeccccccchhHHH--HH-----------------------HHHhhhhccccccccccccccccccccccchhhhhhhc
Confidence 888888877643210 00 011223344455555555544311 00 0011124
Q ss_pred cceEEEccCCccccc-----CCccccCCCCCCEEEccCccccCcCCCcc-cCCCCCCEEEccCccceeecCc---cccc-
Q 046598 358 TLEVLLLDNNQIFGN-----IPAAIGKFVNLQRLDMCSNRLSGTIPPAI-GELQNLKDLRLQRNRFQGNIPP---SIGN- 427 (986)
Q Consensus 358 ~L~~L~L~~n~l~~~-----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~---~~~~- 427 (986)
+++.|.+.++.+... ++..+..+.+|+.|++++|.++ .+|..+ ..+++|++|+|++|++++.+|. .+..
T Consensus 282 ~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l 360 (549)
T 2z81_A 282 KVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAW 360 (549)
T ss_dssp TCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSS
T ss_pred ccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhcc
Confidence 566677766665421 1222344567888888888887 566555 5688888888888888876543 2333
Q ss_pred ccccEEEecccccCCCCC--cccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccch
Q 046598 428 LKLFILYLSYNFLQGSIP--SSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEI 505 (986)
Q Consensus 428 ~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 505 (986)
.+|++|+|++|++++..+ ..+..+++|++|++++|+++ .+|.. +..+++|++|++++|+|+ .+|..+. ++|+.
T Consensus 361 ~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~-~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~ 435 (549)
T 2z81_A 361 PSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDS-CQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEV 435 (549)
T ss_dssp TTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSC-CCCCTTCCEEECTTSCCS-CCCTTSC--TTCSE
T ss_pred ccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChh-hcccccccEEECCCCCcc-cccchhc--CCceE
Confidence 358888888888875432 45788899999999999998 78876 567788999999999988 4555443 68999
Q ss_pred hhccCccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCcc
Q 046598 506 LNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDL 585 (986)
Q Consensus 506 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l 585 (986)
|+|++|+|++.+ ..+++|++|+|++|+|+ .+|. ...+++|+.|+|++|+|++.+|..+..+++|++|++++|++
T Consensus 436 L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 509 (549)
T 2z81_A 436 LDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPW 509 (549)
T ss_dssp EECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCB
T ss_pred EECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCc
Confidence 999999998642 57889999999999998 5676 56789999999999999998888899999999999999999
Q ss_pred ccccCCc
Q 046598 586 EGVVPTQ 592 (986)
Q Consensus 586 ~~~~p~~ 592 (986)
+|.+|..
T Consensus 510 ~~~~~~~ 516 (549)
T 2z81_A 510 DCSCPRI 516 (549)
T ss_dssp CCCHHHH
T ss_pred cCCCccH
Confidence 9988853
No 15
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-50 Score=486.72 Aligned_cols=513 Identities=21% Similarity=0.214 Sum_probs=433.5
Q ss_pred EeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceecccccc
Q 046598 67 LDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQL 146 (986)
Q Consensus 67 l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 146 (986)
++.++.+++ .+|..+. +.+++|+|++|++++..+.+|.++++|++|+|++|++++..|..|+++++|++|+|++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 88 (570)
T 2z63_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (570)
T ss_dssp EECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcC
Confidence 444455555 5666553 5799999999999998899999999999999999999988888999999999999999999
Q ss_pred cCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccC-cCcchhhccCCCceeecccccccccCCcc
Q 046598 147 VGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEG-SIPDTLGWLKNLVNLTMAQNRLSGTIPSS 225 (986)
Q Consensus 147 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 225 (986)
++..|.+|+++++|++|++++|++++..+..|+++++|++|+|++|.+++ .+|..|+.+++|++|++++|++++..|..
T Consensus 89 ~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~ 168 (570)
T 2z63_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (570)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGG
T ss_pred CccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHH
Confidence 98888999999999999999999997777689999999999999999986 47999999999999999999999888888
Q ss_pred ccCCCCc----cEEeccccccccccCCcccccccccceEEecCceec-ccCCccccCCCCCcEEecccccccCCCchhhh
Q 046598 226 IFNISSI----TGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLT-GAIPPTISNASNLEIFHGSVNKLTGAAPYLEK 300 (986)
Q Consensus 226 l~~l~~L----~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~ls~N~l~~~~~~l~~ 300 (986)
+..+.+| +.++++.|.+.+..|..+. ..+|+.|++++|... ..++..+..+++++...+..+.+.....
T Consensus 169 ~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~---- 242 (570)
T 2z63_A 169 LRVLHQMPLLNLSLDLSLNPMNFIQPGAFK--EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGN---- 242 (570)
T ss_dssp GHHHHTCTTCCCEEECTTCCCCEECTTTTT--TCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSS----
T ss_pred ccchhccchhhhhcccCCCCceecCHHHhc--cCcceeEecccccccccchhhhhcCccccceeeeccccccCchh----
Confidence 9888888 8999999999866554433 337999999988544 2356677788888877766554432111
Q ss_pred hhhHhhhhhccCCCCCCCCCCcccccccccccccceeecccc-ccccCCCcccccccccceEEEccCCcccccCCccccC
Q 046598 301 LQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININ-NFGGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIGK 379 (986)
Q Consensus 301 l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n-~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~ 379 (986)
+.......+. .+.++ .++.+++..+ .+.+.+|..+..+ ++|+.|++++|.++ .+|..+..
T Consensus 243 -------------l~~~~~~~~~---~l~~l-~l~~l~l~~~~~~~~~~~~~~~~l-~~L~~L~l~~~~l~-~l~~~~~~ 303 (570)
T 2z63_A 243 -------------LEKFDKSALE---GLCNL-TIEEFRLAYLDYYLDDIIDLFNCL-TNVSSFSLVSVTIE-RVKDFSYN 303 (570)
T ss_dssp -------------CEECCTTTTG---GGGGS-EEEEEEEEETTEEESCSTTTTGGG-TTCSEEEEESCEEC-SCCBCCSC
T ss_pred -------------hhhcchhhhc---ccccc-chhhhhhhcchhhhhhchhhhcCc-CcccEEEecCccch-hhhhhhcc
Confidence 0111111111 22222 3567777777 7778888887766 68999999999998 58888888
Q ss_pred CCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccccccEEEecccccCCCC--CcccCCCCCCCee
Q 046598 380 FVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSYNFLQGSI--PSSLGRYETLTTI 457 (986)
Q Consensus 380 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L 457 (986)
+ +|++|++++|.++ .+|. ..+++|+.|++++|.+.+..+. ....+|++|++++|.+++.. |..+..+++|++|
T Consensus 304 ~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~-~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L 378 (570)
T 2z63_A 304 F-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE-VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYL 378 (570)
T ss_dssp C-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC-CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEE
T ss_pred C-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc-ccCCCCCEEeCcCCccCccccccccccccCccCEE
Confidence 8 9999999999998 5665 5789999999999999877665 34457999999999998665 7788999999999
Q ss_pred ecCCCccCCCCCcccccCCCcceEEEccCCcccccCC-cccccccccchhhccCccccccCcccccCCccccEEeccccc
Q 046598 458 DLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIP-SEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENF 536 (986)
Q Consensus 458 ~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 536 (986)
++++|+++ .+|.. +..+++|+.|++++|++++..| ..+..+++|++|++++|++++..|..|.++++|++|+|++|.
T Consensus 379 ~l~~n~l~-~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 456 (570)
T 2z63_A 379 DLSFNGVI-TMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 456 (570)
T ss_dssp ECCSCSEE-EEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCE
T ss_pred ECCCCccc-ccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCc
Confidence 99999998 56666 7888999999999999997666 578999999999999999999999999999999999999999
Q ss_pred cc-ccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCCc-cccccccceeeeCCcccccCCC
Q 046598 537 LQ-GPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPTQ-GVFKNASITSVFGNLKLCGGIP 614 (986)
Q Consensus 537 l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~lcg~~~ 614 (986)
++ +.+|..+..+++|+.|+|++|++++..|..+..+++|++|++++|++++.+|.. ..++.++.+.+.+|++.|.++.
T Consensus 457 l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 457 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 98 579999999999999999999999999999999999999999999999998864 6678899999999999987653
No 16
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-51 Score=440.56 Aligned_cols=252 Identities=30% Similarity=0.469 Sum_probs=193.5
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.++|.+.++||+|+||+||+|++.. .||||+++.. .....++|.+|++++++++|||||+++++|. ++.
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~------~~~ 105 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------KDN 105 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSS
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE------CCe
Confidence 3567889999999999999998764 5999998743 2344678999999999999999999999863 245
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHI 844 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 844 (986)
.++|||||++|+|.++++. ....+++.++..|+.|||+||+|||++ +||||||||+|||+++++.+||
T Consensus 106 ~~iVmEy~~gGsL~~~l~~---------~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki 173 (307)
T 3omv_A 106 LAIVTQWCEGSSLYKHLHV---------QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKI 173 (307)
T ss_dssp CEEEEECCSSCBHHHHHHT---------SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEE
T ss_pred EEEEEEcCCCCCHHHHHhh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEE
Confidence 7999999999999999962 234699999999999999999999999 9999999999999999999999
Q ss_pred cccccceecCCCCCccccccccccccccccccccC---CCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHh
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG---SEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLART 921 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 921 (986)
+|||+|+..............+||+.|||||++.+ ++|+.++|||||||++|||+||+.||....... ........
T Consensus 174 ~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~~ 252 (307)
T 3omv_A 174 GDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGR 252 (307)
T ss_dssp CCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHT
T ss_pred eeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHhc
Confidence 99999987654433444455789999999999864 468999999999999999999999996432111 11111111
Q ss_pred hCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 922 ALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 922 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
....+ .+. .....++.++.+++.+||+.||++||||+||
T Consensus 253 ~~~~p-------~~~-------------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei 291 (307)
T 3omv_A 253 GYASP-------DLS-------------------KLYKNCPKAMKRLVADCVKKVKEERPLFPQI 291 (307)
T ss_dssp TCCCC-------CST-------------------TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHH
T ss_pred CCCCC-------Ccc-------------------cccccchHHHHHHHHHHcCCCHhHCcCHHHH
Confidence 10000 000 0011345678899999999999999999764
No 17
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.8e-51 Score=443.65 Aligned_cols=259 Identities=25% Similarity=0.419 Sum_probs=205.3
Q ss_pred cCCCCCcccccccceeEEEEEECC-----CCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 688 DRFSSVNQIGEGSFGSVFKGILDD-----GRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 688 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
++|.+.++||+|+||+||+|++.. +++.||||+++.......++|.+|++++++++|||||+++|+| .++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~-----~~~ 87 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVC-----VEG 87 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEE-----eeC
Confidence 568889999999999999999753 4788999999877666778899999999999999999999995 345
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCC---ccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCC
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITRED---ETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDED 839 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~---~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 839 (986)
+..++|||||++|+|.++++...... ........+++.+++.|+.||++||+|||++ +||||||||+|||++++
T Consensus 88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 164 (299)
T ss_dssp SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCC
Confidence 78999999999999999997543110 0112345799999999999999999999999 99999999999999999
Q ss_pred CcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHH
Q 046598 840 MIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNL 918 (986)
Q Consensus 840 ~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~ 918 (986)
+.+||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||..... .+.
T Consensus 165 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~-----~~~ 239 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-----NEV 239 (299)
T ss_dssp GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----HHH
T ss_pred CcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-----HHH
Confidence 9999999999987654444344445679999999999999999999999999999999999 9999974321 111
Q ss_pred HHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 919 ARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 919 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.. .+........ +..++.++.+++.+||+.||++||||+||
T Consensus 240 ~~--------~i~~~~~~~~-------------------p~~~~~~~~~li~~cl~~dP~~RPs~~~i 280 (299)
T 4asz_A 240 IE--------CITQGRVLQR-------------------PRTCPQEVYELMLGCWQREPHMRKNIKGI 280 (299)
T ss_dssp HH--------HHHHTCCCCC-------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HH--------HHHcCCCCCC-------------------CccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence 11 0001000000 11345678899999999999999999764
No 18
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=7.7e-51 Score=436.59 Aligned_cols=248 Identities=22% Similarity=0.303 Sum_probs=207.1
Q ss_pred cCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc---CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 688 DRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 688 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
++|++.+.||+|+||+||+|++..+++.||||+++.. .....+.+.+|++++++++|||||+++++ +++++.
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~-----~~~~~~ 106 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFT-----FQDDEK 106 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEE-----EECSSE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEE-----EEeCCE
Confidence 5799999999999999999999999999999999742 23445789999999999999999999999 567789
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHI 844 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 844 (986)
.|+||||++||+|.++++. .+.+++.+++.|+.||+.||+|||++ +|+||||||+|||++.++.+||
T Consensus 107 ~yivmEy~~gG~L~~~i~~----------~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl 173 (311)
T 4aw0_A 107 LYFGLSYAKNGELLKYIRK----------IGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQI 173 (311)
T ss_dssp EEEEECCCTTEEHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEE
Confidence 9999999999999999952 34689999999999999999999999 9999999999999999999999
Q ss_pred cccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCC
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALP 924 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 924 (986)
+|||+|+.+............+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .....
T Consensus 174 ~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~~~---- 244 (311)
T 4aw0_A 174 TDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-----GLIFA---- 244 (311)
T ss_dssp CCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH----
T ss_pred EEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHH----
Confidence 999999987655444455567899999999999999999999999999999999999999963211 11111
Q ss_pred CchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 925 DHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 925 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..+...+. . +...+.++.+++.+|++.||++|||++|+
T Consensus 245 --------~i~~~~~~-~---------------p~~~s~~~~dli~~lL~~dp~~R~t~~e~ 282 (311)
T 4aw0_A 245 --------KIIKLEYD-F---------------PEKFFPKARDLVEKLLVLDATKRLGCEEM 282 (311)
T ss_dssp --------HHHHTCCC-C---------------CTTCCHHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred --------HHHcCCCC-C---------------CcccCHHHHHHHHHHccCCHhHCcChHHH
Confidence 11111100 0 00123456789999999999999999873
No 19
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1e-50 Score=444.03 Aligned_cols=259 Identities=25% Similarity=0.405 Sum_probs=198.3
Q ss_pred cCCCCCcccccccceeEEEEEECC-----CCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 688 DRFSSVNQIGEGSFGSVFKGILDD-----GRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 688 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
++|.+.++||+|+||+||+|++.. +++.||||+++.......++|.+|++++++++|||||+++|+| .++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~-----~~~ 115 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVC-----TEG 115 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EEC
Confidence 457778899999999999999753 4789999999877667778899999999999999999999995 345
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCc-----cccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEec
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDE-----TDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLD 837 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~-----~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 837 (986)
+..|+|||||++|+|.++++....... ......++++.+++.|+.|||+||+|||++ +||||||||+|||++
T Consensus 116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVG 192 (329)
T ss_dssp SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEEC
Confidence 789999999999999999975543211 112345799999999999999999999999 999999999999999
Q ss_pred CCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHH
Q 046598 838 EDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLH 916 (986)
Q Consensus 838 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~ 916 (986)
+++.+||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||..... .
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~-----~ 267 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN-----T 267 (329)
T ss_dssp TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH-----H
T ss_pred CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH-----H
Confidence 999999999999987654444444455679999999999999999999999999999999999 9999964321 1
Q ss_pred HHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 917 NLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 917 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.... .+.. .. +.+.+..++.++.+++.+||+.||++||||+||
T Consensus 268 ~~~~---------~i~~---g~---------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei 310 (329)
T 4aoj_A 268 EAID---------CITQ---GR---------------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 310 (329)
T ss_dssp HHHH---------HHHH---TC---------------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHH
T ss_pred HHHH---------HHHc---CC---------------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHH
Confidence 1111 0000 00 000111345678899999999999999999874
No 20
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-49 Score=472.11 Aligned_cols=458 Identities=20% Similarity=0.220 Sum_probs=374.3
Q ss_pred EEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceecccc
Q 046598 65 TILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHN 144 (986)
Q Consensus 65 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 144 (986)
..+|+++|+++ .+|..+. ++|++|+|++|++++..|.+|.++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 46899999999 6888776 89999999999999888899999999999999999999888999999999999999999
Q ss_pred cccCccCccccCCCCCCeEEccCCcCCC-CcccccCCCcCcceeeccCCcccCcCcchhhccCCC--ceeecccccc--c
Q 046598 145 QLVGKIPSELSSLSKIEHISVNDNNLTG-SIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNL--VNLTMAQNRL--S 219 (986)
Q Consensus 145 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~ 219 (986)
+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++ ..|..+++| ++|+|++|++ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 999 67766 89999999999999997 478999999999999999999985 467888888 9999999999 8
Q ss_pred ccCCccccCCC-CccEEeccccccccccCCcccccccccceEEecCce-------ecccCCccccCCCCCcEEecccccc
Q 046598 220 GTIPSSIFNIS-SITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQ-------LTGAIPPTISNASNLEIFHGSVNKL 291 (986)
Q Consensus 220 ~~~p~~l~~l~-~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~-------l~~~~p~~l~~l~~L~~L~ls~N~l 291 (986)
+..|..+..+. +...++++.|.+.+.++...+..+++|+.|++++|. +.+.+| .++.+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 88899888876 355678899999988888888889999999999997 777666 788899999999888887
Q ss_pred cCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCCCcccccccccceEEEccCCcccc
Q 046598 292 TGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFG 371 (986)
Q Consensus 292 ~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~ 371 (986)
++... ..+ +.... ..+|+.|++++|++++
T Consensus 233 ~~~~~--~~~-----------------------------------------------~~~~~--~~~L~~L~l~~n~l~~ 261 (520)
T 2z7x_B 233 TWNSF--IRI-----------------------------------------------LQLVW--HTTVWYFSISNVKLQG 261 (520)
T ss_dssp EHHHH--HHH-----------------------------------------------HHHHH--TSSCSEEEEEEEEEES
T ss_pred CHHHH--HHH-----------------------------------------------HHHhh--hCcccEEEeecccccC
Confidence 63210 000 00000 1245666666666666
Q ss_pred cCCccc-----cCCCCCCEEEccCccccCcCC-CcccCC---CCCCEEEccCccceeecCcccccccccEEEecccccCC
Q 046598 372 NIPAAI-----GKFVNLQRLDMCSNRLSGTIP-PAIGEL---QNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSYNFLQG 442 (986)
Q Consensus 372 ~~~~~~-----~~l~~L~~L~L~~N~l~~~~~-~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~ 442 (986)
.+|..+ ..+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+..... .-...+|++|++++|++++
T Consensus 262 ~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~Ls~n~l~~ 338 (520)
T 2z7x_B 262 QLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLC-PSKISPFLHLDFSNNLLTD 338 (520)
T ss_dssp CCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCC-CSSCCCCCEEECCSSCCCT
T ss_pred ccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccc-hhhCCcccEEEeECCccCh
Confidence 666666 7777888888888877 344 445444 668888888887764321 0123358888888888888
Q ss_pred CCCcccCCCCCCCeeecCCCccCC--CCCcccccCCCcceEEEccCCcccccCCc-ccccccccchhhccCccccccCcc
Q 046598 443 SIPSSLGRYETLTTIDLSNNNLTG--TIPPQFIGLSSSLIVLDLSRNQLTGSIPS-EVGNLKNLEILNVFGNKLKGEIPS 519 (986)
Q Consensus 443 ~~p~~~~~l~~L~~L~L~~N~l~~--~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~ 519 (986)
.+|..++.+++|++|++++|++++ .+|.. ++.+++|++|++++|++++.+|. .+..+++|+.|+|++|++++.+|.
T Consensus 339 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 417 (520)
T 2z7x_B 339 TVFENCGHLTELETLILQMNQLKELSKIAEM-TTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFR 417 (520)
T ss_dssp TTTTTCCCCSSCCEEECCSSCCCBHHHHHHH-HTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGG
T ss_pred hhhhhhccCCCCCEEEccCCccCccccchHH-HhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhh
Confidence 888889999999999999999984 33344 67788999999999999975665 488889999999999999888877
Q ss_pred cccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCch-hhhcccccceeeccCCccccccCC
Q 046598 520 TLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPE-LLIRLQLVKNLNLSNNDLEGVVPT 591 (986)
Q Consensus 520 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~l~ls~N~l~~~~p~ 591 (986)
.+. ++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++ +|. .+..+++|++|++++|+++|..+.
T Consensus 418 ~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 418 CLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp SCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred hhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCcccCCc
Confidence 665 78999999999999 788888899999999999999995 555 488999999999999999987764
No 21
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.4e-48 Score=475.39 Aligned_cols=557 Identities=21% Similarity=0.184 Sum_probs=391.4
Q ss_pred CCcCCCCCCCCCCCCCcceeeEecCCCCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCce
Q 046598 35 DPLGVLASWNESSHFCQWRGVTCSRRHQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQV 114 (986)
Q Consensus 35 ~~~~~l~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 114 (986)
|+...+++|+.+ -+..|....|..... .+|-++.+++ .+|+.+- +.+++|||++|+|+++.|.+|.++++|++
T Consensus 8 ~~~~~~~~~~~~-~p~~~~~c~~~~~~~---~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~ 80 (635)
T 4g8a_A 8 DDDDKLAAANSS-IPESWEPCVEVVPNI---TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQV 80 (635)
T ss_dssp ------------------CCSEEEETTT---EEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCcchhhcccCC-CCCCCCCccccCCCC---EEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCE
Confidence 334456777543 234565555543322 2344555565 5665442 46788888888888777788888888888
Q ss_pred eeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcc
Q 046598 115 LALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNL 194 (986)
Q Consensus 115 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 194 (986)
|+|++|+|++..|++|.++++|++|+|++|+|++..+.+|.++++|++|+|++|++++..+..|+++++|++|+|++|.+
T Consensus 81 L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l 160 (635)
T 4g8a_A 81 LDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLI 160 (635)
T ss_dssp EECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCcc
Confidence 88888888877777888888888888888888866667788888888888888888877777788888888888888888
Q ss_pred cC-cCcchhhccCCCceeecccccccccCCccccCCCCc----cEEeccccccccccCCcccccccccceEEecCceecc
Q 046598 195 EG-SIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSI----TGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTG 269 (986)
Q Consensus 195 ~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L----~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~ 269 (986)
++ ..|..++.+++|++|+|++|++++..|..+..+.++ ..++++.|.+... +...+ ....++.+++.+|....
T Consensus 161 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i-~~~~~-~~~~~~~l~l~~n~~~~ 238 (635)
T 4g8a_A 161 QSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFI-QPGAF-KEIRLHKLTLRNNFDSL 238 (635)
T ss_dssp CCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEE-CTTTT-TTCEEEEEEEESCCSSH
T ss_pred ccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCccccc-Ccccc-cchhhhhhhhhcccccc
Confidence 65 357778888888888888888887777777665543 3677888887643 33333 24456777887776553
Q ss_pred -cCCccccCCCCCcEEecccccccCCC-------chhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccc
Q 046598 270 -AIPPTISNASNLEIFHGSVNKLTGAA-------PYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLINI 341 (986)
Q Consensus 270 -~~p~~l~~l~~L~~L~ls~N~l~~~~-------~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~ 341 (986)
..+..+..+..++...+..+...... ..+..+..+....+..+....... .....+.....+..+.+..
T Consensus 239 ~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---~~~~~~~~~~~l~~l~~~~ 315 (635)
T 4g8a_A 239 NVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLD---GIIDLFNCLTNVSSFSLVS 315 (635)
T ss_dssp HHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEE---ECTTTTGGGTTCSEEEEES
T ss_pred cccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhccccc---chhhhhhhhcccccccccc
Confidence 33445677777777766544432211 122333333333322222111110 1112334455666666666
Q ss_pred cccccCCCcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeec
Q 046598 342 NNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNI 421 (986)
Q Consensus 342 n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 421 (986)
+.+....+ +. ....++.|++.+|.+....+ ..+..|+.++++.|.+... ..+..+++|+.|++++|.+....
T Consensus 316 ~~~~~~~~--~~-~~~~L~~L~l~~~~~~~~~~---~~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~ 387 (635)
T 4g8a_A 316 VTIERVKD--FS-YNFGWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKG 387 (635)
T ss_dssp CEEEECGG--GG-SCCCCSEEEEESCEESSCCC---CBCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEE
T ss_pred cccccccc--cc-cchhhhhhhcccccccCcCc---ccchhhhhcccccccCCCC--cccccccccccchhhcccccccc
Confidence 66654322 11 22467888888888875544 3466788888888887633 34557889999999999886433
Q ss_pred --Cccc-ccccccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccc
Q 046598 422 --PPSI-GNLKLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVG 498 (986)
Q Consensus 422 --~~~~-~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~ 498 (986)
+..+ ...+|++++++.|.+.. .+..+..+++|+.+++++|++....+...+..+.+++.++++.|.+++..+..+.
T Consensus 388 ~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~ 466 (635)
T 4g8a_A 388 CCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 466 (635)
T ss_dssp ECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTT
T ss_pred ccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhccccccccccccccccccccccccccccccccccccc
Confidence 3222 34468899999998874 5667888899999999988888777777788888999999999999988888888
Q ss_pred cccccchhhccCcccc-ccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccce
Q 046598 499 NLKNLEILNVFGNKLK-GEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKN 577 (986)
Q Consensus 499 ~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 577 (986)
.++.|+.|+|++|++. +..|..|..+++|++|+|++|+|++.+|..|.++++|++|+|++|+|++..|..|..+++|++
T Consensus 467 ~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~ 546 (635)
T 4g8a_A 467 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 546 (635)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCE
T ss_pred cchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCE
Confidence 8999999999999754 457788999999999999999999888899999999999999999999888888999999999
Q ss_pred eeccCCccccccCCc-ccc-ccccceeeeCCcccccC
Q 046598 578 LNLSNNDLEGVVPTQ-GVF-KNASITSVFGNLKLCGG 612 (986)
Q Consensus 578 l~ls~N~l~~~~p~~-~~~-~~~~~~~~~~n~~lcg~ 612 (986)
|+|++|+|++.+|.. ..+ ++++.+++.+||+.|+|
T Consensus 547 L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 547 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp EECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred EECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 999999999988875 333 56888899999999975
No 22
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.5e-50 Score=439.36 Aligned_cols=248 Identities=22% Similarity=0.289 Sum_probs=205.3
Q ss_pred cCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEEE
Q 046598 688 DRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 767 (986)
Q Consensus 688 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 767 (986)
+.|++.++||+|+||+||+|++..+++.||||+++.......+.+.+|++++++++|||||+++++ +.+++..|+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~-----~~~~~~~~i 148 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-----YLVGDELWV 148 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEE-----EEETTEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEE-----EEECCEEEE
Confidence 569999999999999999999999999999999987666666788999999999999999999999 455688999
Q ss_pred EEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEccc
Q 046598 768 VFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIGDF 847 (986)
Q Consensus 768 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DF 847 (986)
|||||+||+|.+++.. ..+++.+++.|+.||+.||+|||++ +||||||||+|||++.++.+||+||
T Consensus 149 vmEy~~gg~L~~~l~~-----------~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DF 214 (346)
T 4fih_A 149 VMEFLEGGALTDIVTH-----------TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDF 214 (346)
T ss_dssp EECCCTTEEHHHHHHH-----------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCC
T ss_pred EEeCCCCCcHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecC
Confidence 9999999999999851 3589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCch
Q 046598 848 GLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALPDHV 927 (986)
Q Consensus 848 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 927 (986)
|+|+.+.... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||...... .....+....+..
T Consensus 215 Gla~~~~~~~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~~~~~- 289 (346)
T 4fih_A 215 GFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNLPPR- 289 (346)
T ss_dssp TTCEECCSSS--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSSCCC-
T ss_pred cCceecCCCC--CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHcCCCCC-
Confidence 9998764332 2334578999999999999999999999999999999999999999632111 1111111111100
Q ss_pred hHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 928 MDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 928 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.. .....+.++.+++.+||+.||++|||++|+
T Consensus 290 -----------~~----------------~~~~~s~~~~dli~~~L~~dP~~R~ta~e~ 321 (346)
T 4fih_A 290 -----------LK----------------NLHKVSPSLKGFLDRLLVRDPAQRATAAEL 321 (346)
T ss_dssp -----------CS----------------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred -----------CC----------------ccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 00 001234567799999999999999998764
No 23
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=8.7e-51 Score=443.70 Aligned_cols=250 Identities=22% Similarity=0.334 Sum_probs=198.4
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.++|++++.||+|+||+||+|++..+++.||||+++.. .....+.+.+|++++++++|||||+++++ +.+++.
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~-----~~~~~~ 97 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES-----FEENGS 97 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEE-----EEETTE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEE-----EEECCE
Confidence 36899999999999999999999999999999999753 33446789999999999999999999999 456688
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHI 844 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 844 (986)
.|+|||||+||+|.+++... ....+++.+++.|+.||+.||+|||++ +||||||||+|||++.++.+||
T Consensus 98 ~yiVmEy~~gg~L~~~i~~~--------~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl 166 (350)
T 4b9d_A 98 LYIVMDYCEGGDLFKRINAQ--------KGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQL 166 (350)
T ss_dssp EEEEEECCTTCBHHHHHHHT--------TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEE
T ss_pred EEEEEeCCCCCcHHHHHHHc--------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEE
Confidence 99999999999999999632 234578999999999999999999999 9999999999999999999999
Q ss_pred cccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCC
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALP 924 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 924 (986)
+|||+|+.... ........+||+.|||||++.+..|+.++||||+||++|||+||+.||.... .......
T Consensus 167 ~DFGla~~~~~--~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~~~~--- 236 (350)
T 4b9d_A 167 GDFGIARVLNS--TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-----MKNLVLK--- 236 (350)
T ss_dssp CSTTEESCCCH--HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHH---
T ss_pred cccccceeecC--CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHHH---
Confidence 99999986532 1223345679999999999999999999999999999999999999996321 1111111
Q ss_pred CchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 925 DHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 925 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+........+ ...+.++.+++.+||+.||++|||++|+
T Consensus 237 -----i~~~~~~~~~-------------------~~~s~~~~~li~~~L~~dP~~R~s~~e~ 274 (350)
T 4b9d_A 237 -----IISGSFPPVS-------------------LHYSYDLRSLVSQLFKRNPRDRPSVNSI 274 (350)
T ss_dssp -----HHHTCCCCCC-------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -----HHcCCCCCCC-------------------ccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 1110000000 1234457799999999999999998763
No 24
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.6e-50 Score=438.18 Aligned_cols=259 Identities=20% Similarity=0.330 Sum_probs=203.8
Q ss_pred cCCCCCcccccccceeEEEEEEC-----CCCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCC
Q 046598 688 DRFSSVNQIGEGSFGSVFKGILD-----DGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 761 (986)
Q Consensus 688 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 761 (986)
.++++.++||+|+||+||+|++. .+++.||||+++... ....++|.+|+.++++++|||||+++|+|. .
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-----~ 100 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT-----K 100 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-----S
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEE-----E
Confidence 34667889999999999999974 346889999996432 334578999999999999999999999963 4
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCc------cccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeE
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDE------TDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNIL 835 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 835 (986)
++..++|||||++|+|.++++....... .......+++.++..|+.|||+||+|||++ +||||||||+|||
T Consensus 101 ~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NIL 177 (308)
T 4gt4_A 101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVL 177 (308)
T ss_dssp SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceE
Confidence 5778999999999999999965432211 112345799999999999999999999999 9999999999999
Q ss_pred ecCCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCcccccccc
Q 046598 836 LDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMN 914 (986)
Q Consensus 836 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~ 914 (986)
+++++.+||+|||+|+.....+.........||+.|||||++.++.|+.++|||||||++|||+| |+.||.....
T Consensus 178 l~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~---- 253 (308)
T 4gt4_A 178 VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN---- 253 (308)
T ss_dssp ECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH----
T ss_pred ECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH----
Confidence 99999999999999987654443444455679999999999999999999999999999999999 8999974321
Q ss_pred HHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 915 LHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 915 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..... .+.... +.+.+.+++.++.+++.+||+.||++||||+||
T Consensus 254 -~~~~~---------~i~~~~------------------~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei 297 (308)
T 4gt4_A 254 -QDVVE---------MIRNRQ------------------VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 297 (308)
T ss_dssp -HHHHH---------HHHTTC------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -HHHHH---------HHHcCC------------------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence 11111 111000 000112456678899999999999999999874
No 25
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=9.3e-50 Score=481.69 Aligned_cols=453 Identities=18% Similarity=0.257 Sum_probs=387.7
Q ss_pred CCCCEEEccCCCccccCCcchhccccCceeeceeccc------CC------CCccchhcCccccceecccccccCccCcc
Q 046598 86 SFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSI------GG------AIPANISSCSNLIQLRLFHNQLVGKIPSE 153 (986)
Q Consensus 86 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l------~~------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 153 (986)
.+++.|+|++|++.|.+|.+|++|++|++|+|++|.+ .+ .+|... +..|+ +++++|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 4678999999999999999999999999999999987 33 455544 67788 999999999988887
Q ss_pred ccC-CCCCCeEEccCCcCCCCcccccCCCcCcceeecc--CCcccCcCcchhhccCCCceeeccccccccc---------
Q 046598 154 LSS-LSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLS--GNNLEGSIPDTLGWLKNLVNLTMAQNRLSGT--------- 221 (986)
Q Consensus 154 ~~~-l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~--~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--------- 221 (986)
+.. +..+..+++....+.. .....++.+++. .|++++ +|..|+.+++|++|+|++|++++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~ 230 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENE 230 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCT
T ss_pred HHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccc
Confidence 763 3445555555444431 222345555554 689998 899999999999999999999986
Q ss_pred --------CCcccc--CCCCccEEeccccccccccCCcccccccccceEEecCce-ecc-cCCccccCC------CCCcE
Q 046598 222 --------IPSSIF--NISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQ-LTG-AIPPTISNA------SNLEI 283 (986)
Q Consensus 222 --------~p~~l~--~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l------~~L~~ 283 (986)
+|..++ ++++|++|++++|.+.+.+|..+. ++++|++|++++|+ ++| .+|..++.+ ++|+.
T Consensus 231 ~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~ 309 (636)
T 4eco_A 231 NSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLK-ALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQI 309 (636)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTT-TCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCE
T ss_pred ccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHh-cCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCE
Confidence 999999 999999999999999999997665 79999999999998 998 889888776 77777
Q ss_pred EecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCCCc--ccccccccceE
Q 046598 284 FHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSLPA--CISNLSTTLEV 361 (986)
Q Consensus 284 L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~--~~~~~~~~L~~ 361 (986)
|++++|+++. +|. .+..+ ++|+.
T Consensus 310 L~L~~n~l~~------------------------------------------------------ip~~~~l~~l-~~L~~ 334 (636)
T 4eco_A 310 IYIGYNNLKT------------------------------------------------------FPVETSLQKM-KKLGM 334 (636)
T ss_dssp EECCSSCCSS------------------------------------------------------CCCHHHHTTC-TTCCE
T ss_pred EECCCCcCCc------------------------------------------------------cCchhhhccC-CCCCE
Confidence 7777777663 343 33333 57899
Q ss_pred EEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCC-CCEEEccCccceeecCcccccc---cccEEEecc
Q 046598 362 LLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQN-LKDLRLQRNRFQGNIPPSIGNL---KLFILYLSY 437 (986)
Q Consensus 362 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~~---~L~~L~L~~ 437 (986)
|++++|+++|.+| .|..+++|++|++++|+++ .+|..|..+++ |++|++++|+++ .+|..+... +|++|++++
T Consensus 335 L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~ 411 (636)
T 4eco_A 335 LECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSY 411 (636)
T ss_dssp EECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCS
T ss_pred EeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcC
Confidence 9999999999999 9999999999999999999 88999999999 999999999999 778777654 599999999
Q ss_pred cccCCCCCcccC-------CCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCccccc--------ccc
Q 046598 438 NFLQGSIPSSLG-------RYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGN--------LKN 502 (986)
Q Consensus 438 N~l~~~~p~~~~-------~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~--------l~~ 502 (986)
|.+++.+|..|. .+++|++|+|++|+++ .+|..++..+++|+.|+|++|+|+ .+|..+.. +++
T Consensus 412 N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~ 489 (636)
T 4eco_A 412 NEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYL 489 (636)
T ss_dssp SCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGG
T ss_pred CcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCC
Confidence 999999999998 8889999999999999 889887888899999999999999 56654433 239
Q ss_pred cchhhccCccccccCccccc--CCccccEEecccccccccCCccccCCCCCCEEeC------CCccCcccCchhhhcccc
Q 046598 503 LEILNVFGNKLKGEIPSTLG--SCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDL------SQNNLSGKIPELLIRLQL 574 (986)
Q Consensus 503 L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~ 574 (986)
|+.|+|++|+++ .+|..+. .+++|++|+|++|+|++ +|..+..+++|+.|+| ++|++.+.+|..+..+++
T Consensus 490 L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~ 567 (636)
T 4eco_A 490 LTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPS 567 (636)
T ss_dssp CCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSS
T ss_pred ccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCC
Confidence 999999999999 7888887 99999999999999997 8999999999999999 568899999999999999
Q ss_pred cceeeccCCccccccCCccccccccceeeeCCcccccCC
Q 046598 575 VKNLNLSNNDLEGVVPTQGVFKNASITSVFGNLKLCGGI 613 (986)
Q Consensus 575 L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lcg~~ 613 (986)
|++|+|++|++ +.+|.. .++.++.+.+.+|+..|-..
T Consensus 568 L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~~~~~ 604 (636)
T 4eco_A 568 LTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNISIDL 604 (636)
T ss_dssp CCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTCEEEC
T ss_pred CCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCccccH
Confidence 99999999999 556654 34789999999999888543
No 26
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.6e-49 Score=484.19 Aligned_cols=461 Identities=19% Similarity=0.263 Sum_probs=333.4
Q ss_pred CCCCEEEccCCCccccCCcchhccccCceeec-eecccCCCCccchhcC----c-----cccceec-------ccccccC
Q 046598 86 SFLKVLRLYNNSFNHEIPSEFDRLRRLQVLAL-HYNSIGGAIPANISSC----S-----NLIQLRL-------FHNQLVG 148 (986)
Q Consensus 86 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L-~~N~l~~~~p~~~~~l----~-----~L~~L~L-------s~N~l~~ 148 (986)
.+++.|+|++|++.|.+|++|++|++|++|+| ++|.++|..|..-... . .++..++ ....+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 56889999999999999999999999999999 9999887744321111 0 0000000 0000000
Q ss_pred -----------ccCccccCCCCCCeEEccC--CcCCCCcccccCCCcCcceeeccCCcccC-----------------cC
Q 046598 149 -----------KIPSELSSLSKIEHISVND--NNLTGSIPSSLGNLSSIRSLFLSGNNLEG-----------------SI 198 (986)
Q Consensus 149 -----------~~p~~~~~l~~L~~L~L~~--N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----------------~~ 198 (986)
..+........++.+.+.. |++++ +|..|+++++|++|+|++|+|++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 0011111222333333333 55554 55556666666666666666655 36
Q ss_pred cchhh--ccCCCceeecccccccccCCccccCCCCccEEeccccc-ccc-ccCCccc------ccccccceEEecCceec
Q 046598 199 PDTLG--WLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNK-IQG-AIPLDYG------FSLQNLQFFSVGENQLT 268 (986)
Q Consensus 199 p~~~~--~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~-l~~-~~p~~~~------~~l~~L~~L~L~~N~l~ 268 (986)
|+.++ .+++|++|+|++|++.+.+|..++++++|+.|++++|+ +++ .+|..+. ..+++|+.|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 66655 67777777777777666777777777777777777776 666 5665432 23458999999999998
Q ss_pred ccCCc--cccCCCCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeecccccccc
Q 046598 269 GAIPP--TISNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGG 346 (986)
Q Consensus 269 ~~~p~--~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~ 346 (986)
.+|. .++++++|+.|++++|+++.++ .
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~~lp-~------------------------------------------------- 590 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVRHLE-A------------------------------------------------- 590 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCCBCC-C-------------------------------------------------
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcccch-h-------------------------------------------------
Confidence 7888 8999999999999888877322 1
Q ss_pred CCCcccccccccceEEEccCCcccccCCccccCCCC-CCEEEccCccccCcCCCcccCCCC--CCEEEccCccceeecCc
Q 046598 347 SLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVN-LQRLDMCSNRLSGTIPPAIGELQN--LKDLRLQRNRFQGNIPP 423 (986)
Q Consensus 347 ~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~Ls~N~l~~~~~~ 423 (986)
+..+ ++|+.|+|++|+++ .+|..+..+++ |+.|+|++|.++ .+|..+..++. |+.|+|++|++.+.+|.
T Consensus 591 -----~~~L-~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~ 662 (876)
T 4ecn_A 591 -----FGTN-VKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRN 662 (876)
T ss_dssp -----CCTT-SEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSS
T ss_pred -----hcCC-CcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCcccc
Confidence 1111 45677777777777 67777777777 888888888887 67777766654 88888888888776654
Q ss_pred cc------ccccccEEEecccccCCCCCcc-cCCCCCCCeeecCCCccCCCCCcccccCC-------CcceEEEccCCcc
Q 046598 424 SI------GNLKLFILYLSYNFLQGSIPSS-LGRYETLTTIDLSNNNLTGTIPPQFIGLS-------SSLIVLDLSRNQL 489 (986)
Q Consensus 424 ~~------~~~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~ip~~~~~~~-------~~L~~L~Ls~N~l 489 (986)
.. ...+|+.|+|++|.++ .+|.. +..+++|+.|+|++|+|+ .+|...+... ++|+.|+|++|+|
T Consensus 663 l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L 740 (876)
T 4ecn_A 663 ISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKL 740 (876)
T ss_dssp CSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCC
T ss_pred chhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCC
Confidence 33 2336899999999999 55555 458999999999999999 8898866544 3899999999999
Q ss_pred cccCCcccc--cccccchhhccCccccccCcccccCCccccEEeccc------ccccccCCccccCCCCCCEEeCCCccC
Q 046598 490 TGSIPSEVG--NLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQE------NFLQGPIPSSLSSLRGLSVLDLSQNNL 561 (986)
Q Consensus 490 ~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l 561 (986)
+ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|++ |++.+.+|..|..+++|+.|+|++|+|
T Consensus 741 ~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 741 T-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818 (876)
T ss_dssp C-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred c-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC
Confidence 9 7888887 99999999999999996 899999999999999976 889999999999999999999999999
Q ss_pred cccCchhhhcccccceeeccCCccccccCCc-cccccccceeeeCCcccc--cCC
Q 046598 562 SGKIPELLIRLQLVKNLNLSNNDLEGVVPTQ-GVFKNASITSVFGNLKLC--GGI 613 (986)
Q Consensus 562 ~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc--g~~ 613 (986)
+.+|..+. ++|+.|+|++|++....+.. ..........+.+|+..| ||+
T Consensus 819 -~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~I~gC~ 870 (876)
T 4ecn_A 819 -RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQDIRGCD 870 (876)
T ss_dssp -CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSEEESCG
T ss_pred -CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCccccCCCC
Confidence 68888866 69999999999998876654 112233456677776543 553
No 27
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=7e-50 Score=427.67 Aligned_cols=251 Identities=25% Similarity=0.369 Sum_probs=196.4
Q ss_pred CC-CCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 689 RF-SSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 689 ~y-~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
+| ++.++||+|+||+||+|.+..+++.||+|++... .....+++.+|++++++++|||||+++++|... ...+...
T Consensus 26 r~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~-~~~~~~~ 104 (290)
T 3fpq_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCI 104 (290)
T ss_dssp SEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEE-ETTEEEE
T ss_pred ceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeec-cCCCcEE
Confidence 44 5667899999999999999999999999999643 334457799999999999999999999986432 2345678
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEec-CCCcEEE
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLD-EDMIAHI 844 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kL 844 (986)
|+|||||+||+|.++++. .+.+++.+++.|+.||+.||+|||++ .++||||||||+|||++ .++.+||
T Consensus 105 ~lvmEy~~gg~L~~~l~~----------~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl 173 (290)
T 3fpq_A 105 VLVTELMTSGTLKTYLKR----------FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKI 173 (290)
T ss_dssp EEEEECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEE
T ss_pred EEEEeCCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEE
Confidence 999999999999999952 34689999999999999999999998 12299999999999998 4789999
Q ss_pred cccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCC
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALP 924 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 924 (986)
+|||+|+.... ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||.... ...........
T Consensus 174 ~DFGla~~~~~----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~----~~~~~~~~i~~ 244 (290)
T 3fpq_A 174 GDLGLATLKRA----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ----NAAQIYRRVTS 244 (290)
T ss_dssp CCTTGGGGCCT----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS----SHHHHHHHHTT
T ss_pred EeCcCCEeCCC----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC----cHHHHHHHHHc
Confidence 99999986432 22334679999999999875 69999999999999999999999996321 11111111111
Q ss_pred CchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 925 DHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 925 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
... +.. .....+.++.+++.+||+.||++|||++|+
T Consensus 245 ~~~-----------~~~---------------~~~~~~~~~~~li~~~L~~dP~~R~s~~e~ 280 (290)
T 3fpq_A 245 GVK-----------PAS---------------FDKVAIPEVKEIIEGCIRQNKDERYSIKDL 280 (290)
T ss_dssp TCC-----------CGG---------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred CCC-----------CCC---------------CCccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 000 000 000122357789999999999999998764
No 28
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.7e-48 Score=471.55 Aligned_cols=523 Identities=20% Similarity=0.172 Sum_probs=431.4
Q ss_pred eeeEecCC---------CCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccC
Q 046598 53 RGVTCSRR---------HQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIG 123 (986)
Q Consensus 53 ~gv~c~~~---------~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 123 (986)
..|.|... +..++.|||++|+|++..+.+|.++++|++|+|++|+|+++.|.+|.++++|++|+|++|+|+
T Consensus 34 ~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~ 113 (635)
T 4g8a_A 34 ITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 113 (635)
T ss_dssp TEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred CEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC
Confidence 35778753 246899999999999777789999999999999999999988999999999999999999999
Q ss_pred CCCccchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCC-CcccccCCCcCcceeeccCCcccCcCcchh
Q 046598 124 GAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTG-SIPSSLGNLSSIRSLFLSGNNLEGSIPDTL 202 (986)
Q Consensus 124 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 202 (986)
+..|..|.++++|++|+|++|++++..+..|+++++|++|+|++|++++ ..|..++++++|++|+|++|+|++..+..|
T Consensus 114 ~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 193 (635)
T 4g8a_A 114 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 193 (635)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccc
Confidence 8778889999999999999999998888889999999999999999986 468889999999999999999999889999
Q ss_pred hccCCCc----eeecccccccccCCccccCCCCccEEeccccccccccCCcccccccccceEEecCce------ecccCC
Q 046598 203 GWLKNLV----NLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQ------LTGAIP 272 (986)
Q Consensus 203 ~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~------l~~~~p 272 (986)
..+.+++ .++++.|.++. ++........+..+++..|.....++...+.++..++...+..+. +.....
T Consensus 194 ~~L~~l~~~~~~~~ls~n~l~~-i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~ 272 (635)
T 4g8a_A 194 RVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDK 272 (635)
T ss_dssp HHHHTCTTCCCEEECTTCCCCE-ECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCT
T ss_pred cchhhhhhhhhhhhcccCcccc-cCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccc
Confidence 8887655 68899999985 455555556788899999887766666666667777777665443 333344
Q ss_pred ccccCCCCCcEEeccccccc----CCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCC
Q 046598 273 PTISNASNLEIFHGSVNKLT----GAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSL 348 (986)
Q Consensus 273 ~~l~~l~~L~~L~ls~N~l~----~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~ 348 (986)
..+..+..+....+..+... +....+..+..+..+.+..+.+.. +..+.....++.+++..|.+.+..
T Consensus 273 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~--------~~~~~~~~~L~~L~l~~~~~~~~~ 344 (635)
T 4g8a_A 273 SALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIER--------VKDFSYNFGWQHLELVNCKFGQFP 344 (635)
T ss_dssp TTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEE--------CGGGGSCCCCSEEEEESCEESSCC
T ss_pred cccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccc--------ccccccchhhhhhhcccccccCcC
Confidence 55666667777766655443 333445556666666666665432 234555677888999999887544
Q ss_pred CcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCcccc--CcCCCcccCCCCCCEEEccCccceeecCcccc
Q 046598 349 PACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLS--GTIPPAIGELQNLKDLRLQRNRFQGNIPPSIG 426 (986)
Q Consensus 349 p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 426 (986)
+..+ ..++.+.+.+|.+... .....+++|+.|++++|.+. +..+..+..+.+|+.|+++.|.+....+....
T Consensus 345 ~~~l----~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~ 418 (635)
T 4g8a_A 345 TLKL----KSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLG 418 (635)
T ss_dssp CCBC----TTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTT
T ss_pred cccc----hhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccc
Confidence 4332 4678899999987643 34568999999999999986 34566778899999999999999876665555
Q ss_pred cccccEEEecccccCCCCC-cccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCccc-ccCCcccccccccc
Q 046598 427 NLKLFILYLSYNFLQGSIP-SSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLT-GSIPSEVGNLKNLE 504 (986)
Q Consensus 427 ~~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~ 504 (986)
..+|+.++++.|+.....+ ..|..+++++.+++++|++.+..+ ..+..++.|+.|++++|++. +..|..|..+++|+
T Consensus 419 l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~-~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~ 497 (635)
T 4g8a_A 419 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFN-GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLT 497 (635)
T ss_dssp CTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCT-TTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCC
T ss_pred cccccchhhhhccccccccccccccccccccccccccccccccc-cccccchhhhhhhhhhcccccccCchhhhhccccC
Confidence 6679999999888776654 468889999999999999995544 44788899999999999854 45788999999999
Q ss_pred hhhccCccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcc-cccceeeccCC
Q 046598 505 ILNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRL-QLVKNLNLSNN 583 (986)
Q Consensus 505 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~l~ls~N 583 (986)
+|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|||++|+|++..|..+..+ ++|++|+|++|
T Consensus 498 ~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~N 577 (635)
T 4g8a_A 498 FLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN 577 (635)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTC
T ss_pred EEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 68999999999
Q ss_pred ccccccCC
Q 046598 584 DLEGVVPT 591 (986)
Q Consensus 584 ~l~~~~p~ 591 (986)
+++|....
T Consensus 578 p~~C~C~~ 585 (635)
T 4g8a_A 578 DFACTCEH 585 (635)
T ss_dssp CBCCSGGG
T ss_pred CCcccCCc
Confidence 99997654
No 29
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4.6e-49 Score=470.44 Aligned_cols=481 Identities=19% Similarity=0.193 Sum_probs=399.2
Q ss_pred CCcceeeEecCC--CCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCC
Q 046598 49 FCQWRGVTCSRR--HQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAI 126 (986)
Q Consensus 49 ~c~w~gv~c~~~--~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 126 (986)
-|++.+++.-+. ..+++.|||++|++++..|..|+++++|++|+|++|++++..|.+|+++++|++|+|++|++++..
T Consensus 11 ~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 90 (549)
T 2z81_A 11 DGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLS 90 (549)
T ss_dssp ECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCC
T ss_pred ECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccC
Confidence 356777665442 357999999999999888999999999999999999999999999999999999999999999888
Q ss_pred ccchhcCccccceecccccccC-ccCccccCCCCCCeEEccCCcCCCCcc-cccCCCcCcceeeccCCcccCcCcchhhc
Q 046598 127 PANISSCSNLIQLRLFHNQLVG-KIPSELSSLSKIEHISVNDNNLTGSIP-SSLGNLSSIRSLFLSGNNLEGSIPDTLGW 204 (986)
Q Consensus 127 p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 204 (986)
|..|+.+++|++|+|++|.+++ .+|..|+++++|++|++++|.+.+.+| ..|+++++|++|++++|++++..|..++.
T Consensus 91 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 170 (549)
T 2z81_A 91 SSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS 170 (549)
T ss_dssp HHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT
T ss_pred HHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhc
Confidence 8889999999999999999997 367889999999999999999555555 68999999999999999999999999999
Q ss_pred cCCCceeecccccccccCCccc-cCCCCccEEecccccccccc--CCcccccccccceEEecCceecccCC----ccccC
Q 046598 205 LKNLVNLTMAQNRLSGTIPSSI-FNISSITGFDAGVNKIQGAI--PLDYGFSLQNLQFFSVGENQLTGAIP----PTISN 277 (986)
Q Consensus 205 l~~L~~L~L~~N~l~~~~p~~l-~~l~~L~~L~l~~N~l~~~~--p~~~~~~l~~L~~L~L~~N~l~~~~p----~~l~~ 277 (986)
+++|++|++++|.+. .+|..+ ..+++|+.|++++|.+.+.. |......+++|+.|++++|++++..+ ..+..
T Consensus 171 l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~ 249 (549)
T 2z81_A 171 IRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRY 249 (549)
T ss_dssp CSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGG
T ss_pred cccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhh
Confidence 999999999999987 455544 57899999999999998742 33444567899999999999987554 34577
Q ss_pred CCCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccC-----CCccc
Q 046598 278 ASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGS-----LPACI 352 (986)
Q Consensus 278 l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~-----~p~~~ 352 (986)
+++|+.+++++|.+.+....- ... ...+..+.+++.+.+..+.+... ++. +
T Consensus 250 ~~~L~~l~l~~~~~~~~~~~~--------------------~~~---~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~-~ 305 (549)
T 2z81_A 250 ILELSEVEFDDCTLNGLGDFN--------------------PSE---SDVVSELGKVETVTIRRLHIPQFYLFYDLST-V 305 (549)
T ss_dssp CTTCCEEEEESCEEECCSCCC--------------------CCT---TTCCCCCTTCCEEEEESCBCSCGGGSCCCCH-H
T ss_pred hcccccccccccccccccccc--------------------ccc---hhhhhhhcccccccccccccchhhhcccchh-h
Confidence 899999999999988754210 000 11233445556666665544321 111 1
Q ss_pred ccccccceEEEccCCcccccCCccc-cCCCCCCEEEccCccccCcCC---CcccCCCCCCEEEccCccceeecC--cccc
Q 046598 353 SNLSTTLEVLLLDNNQIFGNIPAAI-GKFVNLQRLDMCSNRLSGTIP---PAIGELQNLKDLRLQRNRFQGNIP--PSIG 426 (986)
Q Consensus 353 ~~~~~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~ 426 (986)
.....+|+.|++++|++. .+|..+ ..+++|++|++++|++++..| ..++.+++|++|+|++|++++..+ ..+.
T Consensus 306 ~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 384 (549)
T 2z81_A 306 YSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILL 384 (549)
T ss_dssp HHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGG
T ss_pred hhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhh
Confidence 233467899999999998 566655 679999999999999997664 457889999999999999986543 3454
Q ss_pred cc-cccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccch
Q 046598 427 NL-KLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEI 505 (986)
Q Consensus 427 ~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 505 (986)
.+ +|++|++++|+++ .+|..+..+++|++|++++|+++ .+|..+ .++|++|+|++|+|++. +..+++|++
T Consensus 385 ~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~---~~~L~~L~Ls~N~l~~~----~~~l~~L~~ 455 (549)
T 2z81_A 385 TLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI---PQTLEVLDVSNNNLDSF----SLFLPRLQE 455 (549)
T ss_dssp GCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTS---CTTCSEEECCSSCCSCC----CCCCTTCCE
T ss_pred cCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchh---cCCceEEECCCCChhhh----cccCChhcE
Confidence 44 6999999999999 68889999999999999999998 677653 36899999999999964 257899999
Q ss_pred hhccCccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCc
Q 046598 506 LNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIP 566 (986)
Q Consensus 506 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 566 (986)
|+|++|+|+ .+|. ...+++|++|+|++|+|++.+|..+..+++|+.|+|++|++++..|
T Consensus 456 L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 456 LYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp EECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred EECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 999999999 6776 5789999999999999999999999999999999999999998776
No 30
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.3e-49 Score=432.64 Aligned_cols=247 Identities=21% Similarity=0.248 Sum_probs=197.1
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
.+.|++.++||+|+||+||+|+++.+++.||||+++.... ..+|+.++++++|||||+++++ +.+++..|
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~-----~~~~~~~~ 126 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGA-----VREGPWVN 126 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEE-----EEETTEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEE-----EEECCEEE
Confidence 3568888999999999999999999999999999975322 2469999999999999999999 45568899
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCC-cEEEc
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDM-IAHIG 845 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~ 845 (986)
+|||||+||+|.++++. .+.+++.+++.|+.||+.||+|||++ +||||||||+|||++.++ ++||+
T Consensus 127 ivmEy~~gg~L~~~l~~----------~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~ 193 (336)
T 4g3f_A 127 IFMELLEGGSLGQLIKQ----------MGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALC 193 (336)
T ss_dssp EEECCCTTCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEEC
T ss_pred EEEeccCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEe
Confidence 99999999999999952 34699999999999999999999999 999999999999999988 69999
Q ss_pred ccccceecCCCCCc---cccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 846 DFGLARFLPLSSAQ---TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 846 DFG~a~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
|||+|+.+...... ......+||+.|||||++.+..|+.++||||+||++|||+||+.||........ ........
T Consensus 194 DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~~~~ 272 (336)
T 4g3f_A 194 DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLKIASEP 272 (336)
T ss_dssp CCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHHHHHSC
T ss_pred eCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHHcCC
Confidence 99999877543221 122345799999999999999999999999999999999999999974333221 11111100
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.... ..+..++.++.+++.+||+.||++|||++||
T Consensus 273 --~~~~---------------------------~~~~~~s~~~~~li~~~L~~dP~~R~sa~el 307 (336)
T 4g3f_A 273 --PPIR---------------------------EIPPSCAPLTAQAIQEGLRKEPVHRASAMEL 307 (336)
T ss_dssp --CGGG---------------------------GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred --CCch---------------------------hcCccCCHHHHHHHHHHccCCHhHCcCHHHH
Confidence 0000 0011234567899999999999999998763
No 31
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.9e-49 Score=440.61 Aligned_cols=249 Identities=22% Similarity=0.296 Sum_probs=205.7
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
.+.|++.++||+|+||.||+|++..+++.||||+++.......+.+.+|+.+|++++|||||+++++ +.+++..|
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~-----~~~~~~~~ 224 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-----YLVGDELW 224 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEE-----EEETTEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEE-----EEECCEEE
Confidence 3569999999999999999999999999999999987666667789999999999999999999999 45568899
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEcc
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIGD 846 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 846 (986)
+|||||+||+|.++++. ..+++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|
T Consensus 225 iVmEy~~gG~L~~~i~~-----------~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~D 290 (423)
T 4fie_A 225 VVMEFLEGGALTDIVTH-----------TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSD 290 (423)
T ss_dssp EEEECCTTEEHHHHHHH-----------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECC
T ss_pred EEEeCCCCCcHHHHHhc-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEec
Confidence 99999999999999851 3589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCc
Q 046598 847 FGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALPDH 926 (986)
Q Consensus 847 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 926 (986)
||+|+.+.... ......+||+.|||||++.+..|+.++|||||||++|||++|+.||...... .....+....+..
T Consensus 291 FGla~~~~~~~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~~~~~ 366 (423)
T 4fie_A 291 FGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNLPPR 366 (423)
T ss_dssp CTTCEECCSSC--CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSCCCC
T ss_pred CccceECCCCC--ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHcCCCCC
Confidence 99998764332 2334578999999999999999999999999999999999999999632111 1111111111100
Q ss_pred hhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 927 VMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 927 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. . .....+.++.+++.+||+.||++|||++|+
T Consensus 367 ~------------~----------------~~~~~s~~~~dli~~~L~~dP~~R~ta~el 398 (423)
T 4fie_A 367 L------------K----------------NLHKVSPSLKGFLDRLLVRDPAQRATAAEL 398 (423)
T ss_dssp C------------S----------------CTTSSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred C------------c----------------ccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 0 0 001233457799999999999999998764
No 32
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.4e-49 Score=416.87 Aligned_cols=245 Identities=24% Similarity=0.347 Sum_probs=186.8
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc---CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
.++|++.+.||+|+||+||+|++..+++.||||+++.. .....+++.+|++++++++|||||+++++ +.+++
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~-----~~~~~ 86 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV-----IKSKD 86 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEE-----EECSS
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEE-----EEECC
Confidence 36899999999999999999999999999999999643 23345679999999999999999999999 56678
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..|+||||+ +|+|.+++.. .+.+++.+++.++.||+.||+|||++ +|+||||||+|||+++++++|
T Consensus 87 ~~~ivmEy~-~g~L~~~l~~----------~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vk 152 (275)
T 3hyh_A 87 EIIMVIEYA-GNELFDYIVQ----------RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVK 152 (275)
T ss_dssp EEEEEEECC-CEEHHHHHHH----------SCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEE
T ss_pred EEEEEEeCC-CCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEE
Confidence 899999999 7899999852 34699999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEV-SISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
|+|||+|+..... ......+||+.|||||++.+..+ +.++||||+||++|||+||+.||... +.......
T Consensus 153 l~DFGla~~~~~~---~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~-----~~~~~~~~- 223 (275)
T 3hyh_A 153 IADFGLSNIMTDG---NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE-----SIPVLFKN- 223 (275)
T ss_dssp ECCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHH-
T ss_pred EeecCCCeecCCC---CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC-----CHHHHHHH-
Confidence 9999999865322 22334679999999999998876 58999999999999999999999632 11111111
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+..... .-| ...+.++.+++.+|++.||++|||++|+
T Consensus 224 -------i~~~~~-~~p-------------------~~~s~~~~~li~~~L~~dP~~R~s~~ei 260 (275)
T 3hyh_A 224 -------ISNGVY-TLP-------------------KFLSPGAAGLIKRMLIVNPLNRISIHEI 260 (275)
T ss_dssp -------HHHTCC-CCC-------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred -------HHcCCC-CCC-------------------CCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 000000 000 0123456789999999999999998764
No 33
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1e-47 Score=455.41 Aligned_cols=458 Identities=21% Similarity=0.225 Sum_probs=368.6
Q ss_pred CEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEccCC
Q 046598 89 KVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDN 168 (986)
Q Consensus 89 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 168 (986)
++||+++|+++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57999999998 5777666 89999999999999888899999999999999999999888999999999999999999
Q ss_pred cCCCCcccccCCCcCcceeeccCCcccC-cCcchhhccCCCceeecccccccccCCccccCCCCc--cEEecccccc--c
Q 046598 169 NLTGSIPSSLGNLSSIRSLFLSGNNLEG-SIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSI--TGFDAGVNKI--Q 243 (986)
Q Consensus 169 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~l~~N~l--~ 243 (986)
+++ .+|.. .+++|++|+|++|++++ .+|..|+.+++|++|+|++|++++ ..+..+++| +.|+++.|.+ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 999 67766 89999999999999987 478999999999999999999986 456667777 8888888888 6
Q ss_pred cccCCccccccc-ccceEEecCceecccCCc-cccCCCCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCC
Q 046598 244 GAIPLDYGFSLQ-NLQFFSVGENQLTGAIPP-TISNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRD 321 (986)
Q Consensus 244 ~~~p~~~~~~l~-~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~ 321 (986)
+..|..+. .+. +...+++++|++.+.++. .+.++++|+.+++++|........
T Consensus 154 ~~~~~~l~-~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~------------------------ 208 (520)
T 2z7x_B 154 KEDPEGLQ-DFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSY------------------------ 208 (520)
T ss_dssp SCCTTTTT-TCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHH------------------------
T ss_pred cccccccc-ccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccce------------------------
Confidence 66665443 222 334567777777665543 566677777777777652110000
Q ss_pred cccccccccccccceeeccccccccCCCcccccccccceEEEccCCcccccCCcccc---CCCCCCEEEccCccccCcCC
Q 046598 322 LNFLCSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIG---KFVNLQRLDMCSNRLSGTIP 398 (986)
Q Consensus 322 l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~---~l~~L~~L~L~~N~l~~~~~ 398 (986)
+.+.+| .+..+ ++|+.|++++|.+++..+..+. ..++|++|++++|+++|.+|
T Consensus 209 ----------------------~~~~~~-~l~~l-~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p 264 (520)
T 2z7x_B 209 ----------------------FLSILA-KLQTN-PKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLD 264 (520)
T ss_dssp ----------------------HHHHHH-GGGGC-TTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCC
T ss_pred ----------------------eecchh-hhccc-cchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccc
Confidence 112222 22222 3455666666665543222111 24689999999999999999
Q ss_pred Ccc-----cCCCCCCEEEccCccceeecC-ccc----ccccccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCC
Q 046598 399 PAI-----GELQNLKDLRLQRNRFQGNIP-PSI----GNLKLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTI 468 (986)
Q Consensus 399 ~~~-----~~l~~L~~L~Ls~N~l~~~~~-~~~----~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~i 468 (986)
..+ ..+++|+.+++++|.+ .+| ..+ ...+|+.|++++|.+.+.. .+..+++|++|++++|++++.+
T Consensus 265 ~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~ 340 (520)
T 2z7x_B 265 FRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTV 340 (520)
T ss_dssp CCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTT
T ss_pred cchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhh
Confidence 998 9999999999999999 455 333 2346999999999987533 2368899999999999999878
Q ss_pred CcccccCCCcceEEEccCCcccc--cCCcccccccccchhhccCccccccCcc-cccCCccccEEecccccccccCCccc
Q 046598 469 PPQFIGLSSSLIVLDLSRNQLTG--SIPSEVGNLKNLEILNVFGNKLKGEIPS-TLGSCIKLEQLEMQENFLQGPIPSSL 545 (986)
Q Consensus 469 p~~~~~~~~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~ 545 (986)
|.. ++.+++|++|++++|++++ .+|..+..+++|++|+|++|++++.+|. .+..+++|++|+|++|++++.+|..+
T Consensus 341 ~~~-~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l 419 (520)
T 2z7x_B 341 FEN-CGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL 419 (520)
T ss_dssp TTT-CCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSC
T ss_pred hhh-hccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhh
Confidence 877 6888999999999999996 4567899999999999999999985665 48899999999999999998888776
Q ss_pred cCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCC-ccccccccceeeeCCcccccC
Q 046598 546 SSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPT-QGVFKNASITSVFGNLKLCGG 612 (986)
Q Consensus 546 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~lcg~ 612 (986)
. ++|+.|+|++|+|+ .+|..+..+++|++|+|++|++++.++. ...++.++.+++.+|++.|.+
T Consensus 420 ~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 420 P--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp C--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred c--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccC
Confidence 5 79999999999999 7888888999999999999999976665 466788899999999999864
No 34
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=8.4e-49 Score=432.19 Aligned_cols=263 Identities=25% Similarity=0.338 Sum_probs=207.1
Q ss_pred hhcCCCCCcccccccceeEEEEEECCC-----CeEEEEEEeeccC-chhHHHHHHHHHHHhcCCC-Ccceeeeeeccccc
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDG-----RTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRH-RNLVKILTACSGVD 758 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~ 758 (986)
..++|++.+.||+|+||+||+|.+... .+.||||+++... ....+++.+|++++++++| ||||+++|+|.
T Consensus 62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~--- 138 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT--- 138 (353)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC---
T ss_pred cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE---
Confidence 357899999999999999999998643 3689999997543 3445779999999999965 89999999963
Q ss_pred cCCCceEEEEEEeccCCCHhHhhccCCCCCc------cccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCC
Q 046598 759 YQGNDFKALVFEFMHNRSLEEWLHPITREDE------TDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPS 832 (986)
Q Consensus 759 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~ 832 (986)
..+...++|||||++|+|.++++....... .......+++.++..|+.|||+||+|||++ +||||||||+
T Consensus 139 -~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~ 214 (353)
T 4ase_A 139 -KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAAR 214 (353)
T ss_dssp -CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred -ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCcc
Confidence 344678999999999999999975432110 112245699999999999999999999999 9999999999
Q ss_pred CeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccc
Q 046598 833 NILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEG 911 (986)
Q Consensus 833 NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~ 911 (986)
|||+++++.+||+|||+|+.+.............||+.|||||++.+..|+.++|||||||++|||+| |+.||......
T Consensus 215 NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~ 294 (353)
T 4ase_A 215 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 294 (353)
T ss_dssp GEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred ceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH
Confidence 99999999999999999997765555455556779999999999999999999999999999999998 99999743221
Q ss_pred cccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 912 DMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. .+....... .. .+.+..++.++.+++.+||+.||++||||+||
T Consensus 295 ~-~~~~~i~~g------------~~------------------~~~p~~~~~~~~~li~~c~~~dP~~RPt~~ei 338 (353)
T 4ase_A 295 E-EFCRRLKEG------------TR------------------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 338 (353)
T ss_dssp H-HHHHHHHHT------------CC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred H-HHHHHHHcC------------CC------------------CCCCccCCHHHHHHHHHHcCcChhHCcCHHHH
Confidence 1 111111110 00 00011234568899999999999999999764
No 35
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.5e-48 Score=422.55 Aligned_cols=269 Identities=23% Similarity=0.294 Sum_probs=195.1
Q ss_pred cCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEEE
Q 046598 688 DRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 767 (986)
Q Consensus 688 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 767 (986)
++|.+.++||+|+||+||+|++. ++.||||+++..... ...+..|+..+.+++|||||+++++|... .......|+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~--g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~-~~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKD-NGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET--TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEE-CSSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEec-CCCceEEEE
Confidence 46788899999999999999985 689999999754322 22334566666788999999999997532 112246899
Q ss_pred EEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEeecCCCCCeEecCCCcE
Q 046598 768 VFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHD-----CQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 768 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
|||||++|+|.++++. ..+++.++.+|+.|+++||+|||++ ..++||||||||+|||++.++++
T Consensus 79 V~Ey~~~gsL~~~l~~-----------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~ 147 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNR-----------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 147 (303)
T ss_dssp EEECCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred EecCCCCCcHHHHHHh-----------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCE
Confidence 9999999999999962 3589999999999999999999975 24589999999999999999999
Q ss_pred EEcccccceecCCCCCc--cccccccccccccccccccCC------CcCcccchhhHHHHHHHHHhCCCCCCcccccccc
Q 046598 843 HIGDFGLARFLPLSSAQ--TSSIGAKGSIGYIAPEYGLGS------EVSISGDVYSYGILLLELITRKKPTDIMFEGDMN 914 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~ 914 (986)
||+|||+|+........ ......+||+.|||||++.+. .++.++|||||||++|||+||++||.........
T Consensus 148 Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p 227 (303)
T 3hmm_A 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp EECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCT
T ss_pred EEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccccccc
Confidence 99999999876543322 122346799999999998764 4788999999999999999999887643332222
Q ss_pred HHHHHHhhCCCchhHHh----hhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 915 LHNLARTALPDHVMDIV----DSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 915 ~~~~~~~~~~~~~~~~~----d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+....... ....++. +..+..... ......+++..+.+++.+||+.||++||||+||
T Consensus 228 ~~~~~~~~--~~~~~~~~~~~~~~~rp~~p-------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei 288 (303)
T 3hmm_A 228 YYDLVPSD--PSVEEMRKVVCEQKLRPNIP-------------NRWQSCEALRVMAKIMRECWYANGAARLTALRI 288 (303)
T ss_dssp TTTTSCSS--CCHHHHHHHHTTSCCCCCCC-------------GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHH
T ss_pred chhccccc--chHHHHHHHHhcccCCCCCC-------------ccccchHHHHHHHHHHHHHcccCHhHCcCHHHH
Confidence 21111000 0011111 111111100 011122566778899999999999999999864
No 36
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=9.9e-49 Score=420.61 Aligned_cols=244 Identities=25% Similarity=0.275 Sum_probs=191.4
Q ss_pred cCCCCCcccccccceeEEEEEEC---CCCeEEEEEEeeccC--chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 688 DRFSSVNQIGEGSFGSVFKGILD---DGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 688 ~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
++|++.+.||+|+||+||+|++. .+++.||||+++... .....++.+|++++++++|||||+++++ +.++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~-----~~~~ 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYA-----FQTE 98 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEE-----EEET
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEE-----EEEC
Confidence 57999999999999999999984 457899999996422 2234578899999999999999999999 4566
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
+..|+|||||+||+|.+++.. .+.+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+
T Consensus 99 ~~~~ivmEy~~gg~L~~~l~~----------~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~v 165 (304)
T 3ubd_A 99 GKLYLILDFLRGGDLFTRLSK----------EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHI 165 (304)
T ss_dssp TEEEEEECCCTTCEEHHHHHH----------HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCE
T ss_pred CEEEEEEEcCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCE
Confidence 889999999999999999952 34689999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
||+|||+|+...... ......+||+.|||||++.+..|+.++||||+||++|||+||+.||..... ......
T Consensus 166 Kl~DFGla~~~~~~~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-----~~~~~~- 237 (304)
T 3ubd_A 166 KLTDFGLSKESIDHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-----KETMTM- 237 (304)
T ss_dssp EEESSEEEEC-------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH-
T ss_pred EecccccceeccCCC--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-----HHHHHH-
Confidence 999999998653222 223456799999999999999999999999999999999999999963211 111111
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMT 984 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 984 (986)
+..... ..| ...+.++.+++.+||+.||++|||+.
T Consensus 238 -------i~~~~~-~~p-------------------~~~s~~~~~li~~~L~~dP~~R~ta~ 272 (304)
T 3ubd_A 238 -------ILKAKL-GMP-------------------QFLSPEAQSLLRMLFKRNPANRLGAG 272 (304)
T ss_dssp -------HHHCCC-CCC-------------------TTSCHHHHHHHHHHTCSSGGGSTTCS
T ss_pred -------HHcCCC-CCC-------------------CcCCHHHHHHHHHHcccCHHHCCCCC
Confidence 111000 000 01234577999999999999999974
No 37
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.2e-46 Score=449.97 Aligned_cols=459 Identities=20% Similarity=0.177 Sum_probs=360.5
Q ss_pred EEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceecccc
Q 046598 65 TILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHN 144 (986)
Q Consensus 65 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 144 (986)
..+|++++++++ +|..+. +.|++|+|++|++++..|.+|.++++|++|+|++|++++..|+.|.++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 689999999995 887665 89999999999999888899999999999999999999888999999999999999999
Q ss_pred cccCccCccccCCCCCCeEEccCCcCCCC-cccccCCCcCcceeeccCCcccCcCcchhhccCCC--ceeecccccc--c
Q 046598 145 QLVGKIPSELSSLSKIEHISVNDNNLTGS-IPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNL--VNLTMAQNRL--S 219 (986)
Q Consensus 145 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~ 219 (986)
+++ .+|.. .+++|++|+|++|++++. .|..|+++++|++|+|++|++++ ..|..+++| ++|+|++|++ +
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT---TTTGGGTTSCEEEEEEEESSCCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc---CchhhhhhceeeEEEeeccccccc
Confidence 999 67766 899999999999999963 56899999999999999999985 356666776 9999999999 8
Q ss_pred ccCCccccCCC-CccEEeccccccccccCCcccccccccceEEecCce-----ecccCCccccCCCCCcEEecccccccC
Q 046598 220 GTIPSSIFNIS-SITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQ-----LTGAIPPTISNASNLEIFHGSVNKLTG 293 (986)
Q Consensus 220 ~~~p~~l~~l~-~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~-----l~~~~p~~l~~l~~L~~L~ls~N~l~~ 293 (986)
+..|..+.++. +...++++.|.+.+.++...+..+++|+.|++++|+ +.+ .+..+..+++|+.++++++.+++
T Consensus 185 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~ 263 (562)
T 3a79_B 185 GGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTW 263 (562)
T ss_dssp SSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECH
T ss_pred ccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCcH
Confidence 88899888775 223568889998888887777788899999998885 222 23356777777777777766642
Q ss_pred CCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCCCcccccccccceEEEccCCcccccC
Q 046598 294 AAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNI 373 (986)
Q Consensus 294 ~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~ 373 (986)
.. +.+ ++..+. ..+|++|++++|++++.+
T Consensus 264 ~~------------------------------------------------~~~-~~~~~~--~~~L~~L~l~~n~l~~~i 292 (562)
T 3a79_B 264 KC------------------------------------------------SVK-LFQFFW--PRPVEYLNIYNLTITERI 292 (562)
T ss_dssp HH------------------------------------------------HHH-HHHHHT--TSSEEEEEEEEEEECSCC
T ss_pred HH------------------------------------------------HHH-HHHhhh--cccccEEEEeccEeeccc
Confidence 11 000 011110 125666666666666666
Q ss_pred Cccc-----cCCCCCCEEEccCccccCcCC-CcccC---CCCCCEEEccCccceeecCcccccccccEEEecccccCCCC
Q 046598 374 PAAI-----GKFVNLQRLDMCSNRLSGTIP-PAIGE---LQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSYNFLQGSI 444 (986)
Q Consensus 374 ~~~~-----~~l~~L~~L~L~~N~l~~~~~-~~~~~---l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~ 444 (986)
|..+ .+++.|+.++++.|.+ .+| ..+.. ..+|++|++++|.+..... .-...+|++|++++|++++.+
T Consensus 293 p~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~-~~~l~~L~~L~l~~n~l~~~~ 369 (562)
T 3a79_B 293 DREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMVC-PPSPSSFTFLNFTQNVFTDSV 369 (562)
T ss_dssp CCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCCC-CSSCCCCCEEECCSSCCCTTT
T ss_pred cchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCcccccC-ccCCCCceEEECCCCccccch
Confidence 6655 5666666666666666 234 22322 2568888888887753221 012235888888888888888
Q ss_pred CcccCCCCCCCeeecCCCccCCCCCc--ccccCCCcceEEEccCCcccccCCc-ccccccccchhhccCccccccCcccc
Q 046598 445 PSSLGRYETLTTIDLSNNNLTGTIPP--QFIGLSSSLIVLDLSRNQLTGSIPS-EVGNLKNLEILNVFGNKLKGEIPSTL 521 (986)
Q Consensus 445 p~~~~~l~~L~~L~L~~N~l~~~ip~--~~~~~~~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~ 521 (986)
|..+..+++|++|+|++|+++ .++. ..++.+++|+.|++++|++++.+|. .+..+++|++|+|++|++++.+|..+
T Consensus 370 ~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 448 (562)
T 3a79_B 370 FQGCSTLKRLQTLILQRNGLK-NFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCL 448 (562)
T ss_dssp TTTCCSCSSCCEEECCSSCCC-BTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSC
T ss_pred hhhhcccCCCCEEECCCCCcC-CcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhh
Confidence 888999999999999999998 4442 3367788999999999999874554 58888999999999999988777665
Q ss_pred cCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchh-hhcccccceeeccCCccccccCCc
Q 046598 522 GSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEL-LIRLQLVKNLNLSNNDLEGVVPTQ 592 (986)
Q Consensus 522 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~l~ls~N~l~~~~p~~ 592 (986)
. ++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++ +|.. +..+++|+.|++++|+++|.+|..
T Consensus 449 ~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 516 (562)
T 3a79_B 449 P--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCPGI 516 (562)
T ss_dssp C--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCCHHHH
T ss_pred c--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCCcchH
Confidence 5 68999999999998 677777799999999999999995 5554 889999999999999999887754
No 38
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2e-47 Score=413.00 Aligned_cols=255 Identities=23% Similarity=0.345 Sum_probs=187.3
Q ss_pred cCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc-hhHHHHHHHHHHHhcCCCCcceeeeeeccccc-------c
Q 046598 688 DRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH-GAFKSFIAECNTLKNIRHRNLVKILTACSGVD-------Y 759 (986)
Q Consensus 688 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------~ 759 (986)
++|++++.||+|+||+||+|+++.+++.||||+++.... ...+.+.+|++++++++|||||++++++.... .
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 468999999999999999999999999999999975443 34567899999999999999999999864321 1
Q ss_pred CCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCC
Q 046598 760 QGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDED 839 (986)
Q Consensus 760 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 839 (986)
..+...|+|||||++|+|.+++..... ....++..++.|+.||+.||+|||++ +|+||||||+|||++.+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~-------~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~ 154 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCT-------IEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMD 154 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCS-------GGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTT
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCC-------CChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCC
Confidence 223457999999999999999964321 12346677899999999999999999 99999999999999999
Q ss_pred CcEEEcccccceecCCCCCc----------cccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccc
Q 046598 840 MIAHIGDFGLARFLPLSSAQ----------TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMF 909 (986)
Q Consensus 840 ~~~kL~DFG~a~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~ 909 (986)
+.+||+|||+|+........ ......+||+.|||||++.+..|+.++|||||||++|||++ ||....
T Consensus 155 ~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~ 231 (299)
T 4g31_A 155 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM 231 (299)
T ss_dssp CCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred CcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc
Confidence 99999999999876433221 12334679999999999999999999999999999999996 775211
Q ss_pred cccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 910 EGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+ ...... .+.+ ... .+...+......+++.+||+.||++|||++|+
T Consensus 232 ~----~~~~~~--------~~~~----~~~---------------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~ei 277 (299)
T 4g31_A 232 E----RVRTLT--------DVRN----LKF---------------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINI 277 (299)
T ss_dssp H----HHHHHH--------HHHT----TCC---------------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred H----HHHHHH--------HHhc----CCC---------------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 1 000000 0000 000 01111233445689999999999999998763
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.4e-45 Score=438.65 Aligned_cols=460 Identities=19% Similarity=0.219 Sum_probs=362.2
Q ss_pred CCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEccC
Q 046598 88 LKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVND 167 (986)
Q Consensus 88 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 167 (986)
.+++++++|++++ +|..+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|.+|+++++|++|+|++
T Consensus 33 ~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 33 ESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 3799999999995 776654 8999999999999988889999999999999999999988899999999999999999
Q ss_pred CcCCCCcccccCCCcCcceeeccCCcccC-cCcchhhccCCCceeecccccccccCCccccCCCCc--cEEecccccc--
Q 046598 168 NNLTGSIPSSLGNLSSIRSLFLSGNNLEG-SIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSI--TGFDAGVNKI-- 242 (986)
Q Consensus 168 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~l~~N~l-- 242 (986)
|+++ .+|.. .+++|++|+|++|++++ .+|..|+.+++|++|+|++|++++. .+..+++| +.|+++.|.+
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 9999 67766 89999999999999996 3468999999999999999999863 45555555 9999999998
Q ss_pred ccccCCccccccc-ccceEEecCceecccCCc-cccCCCCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCC
Q 046598 243 QGAIPLDYGFSLQ-NLQFFSVGENQLTGAIPP-TISNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDR 320 (986)
Q Consensus 243 ~~~~p~~~~~~l~-~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~ 320 (986)
.+..|..+. .+. ..-.+++++|.+.+.++. .+..+++|+.+++++|+.. ...+..
T Consensus 184 ~~~~~~~l~-~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~-----~~~l~~----------------- 240 (562)
T 3a79_B 184 KGGETESLQ-IPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDEN-----CQRLMT----------------- 240 (562)
T ss_dssp CSSSCCEEE-ECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTT-----HHHHHH-----------------
T ss_pred cccCccccc-ccCcceEEEEecCccchhhhhhhcccccceEEEecccccccc-----cchHHH-----------------
Confidence 766665543 222 122568888888876654 4667888888888887521 000000
Q ss_pred CcccccccccccccceeeccccccccCCCcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCc
Q 046598 321 DLNFLCSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPA 400 (986)
Q Consensus 321 ~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 400 (986)
.+..+..++.|+.+++.. +.+++|.+.+..+ .+ ..++|++|++++|.++|.+|..
T Consensus 241 ---~~~~l~~l~~L~~L~L~~--------------------~~l~~~~~~~~~~-~~-~~~~L~~L~l~~n~l~~~ip~~ 295 (562)
T 3a79_B 241 ---FLSELTRGPTLLNVTLQH--------------------IETTWKCSVKLFQ-FF-WPRPVEYLNIYNLTITERIDRE 295 (562)
T ss_dssp ---HHHHHHSCSSCEEEEEEE--------------------EEECHHHHHHHHH-HH-TTSSEEEEEEEEEEECSCCCCC
T ss_pred ---HHHHHhccCcceEEEecC--------------------CcCcHHHHHHHHH-hh-hcccccEEEEeccEeeccccch
Confidence 001122223333333322 2233333332222 22 2459999999999999999988
Q ss_pred c-----cCCCCCCEEEccCccceeecCc-c----cccccccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCc
Q 046598 401 I-----GELQNLKDLRLQRNRFQGNIPP-S----IGNLKLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPP 470 (986)
Q Consensus 401 ~-----~~l~~L~~L~Ls~N~l~~~~~~-~----~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~ 470 (986)
+ ..++.|+.++++.|.+ .+|. . +...+|++|++++|.+.... ....+++|++|++++|++++.+|.
T Consensus 296 ~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~ 371 (562)
T 3a79_B 296 EFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQ 371 (562)
T ss_dssp CCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTT
T ss_pred hhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhh
Confidence 7 6677777777777776 3442 2 23356999999999987432 226889999999999999977777
Q ss_pred ccccCCCcceEEEccCCccccc--CCcccccccccchhhccCccccccCcc-cccCCccccEEecccccccccCCccccC
Q 046598 471 QFIGLSSSLIVLDLSRNQLTGS--IPSEVGNLKNLEILNVFGNKLKGEIPS-TLGSCIKLEQLEMQENFLQGPIPSSLSS 547 (986)
Q Consensus 471 ~~~~~~~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 547 (986)
. ++.+++|+.|+|++|++++. +|..+..+++|++|+|++|++++.+|. .+..+++|++|+|++|++++.+|..+.
T Consensus 372 ~-~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~- 449 (562)
T 3a79_B 372 G-CSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP- 449 (562)
T ss_dssp T-CCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC-
T ss_pred h-hcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc-
Confidence 6 78889999999999999963 356799999999999999999985664 588999999999999999988777665
Q ss_pred CCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCC-ccccccccceeeeCCcccccC
Q 046598 548 LRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPT-QGVFKNASITSVFGNLKLCGG 612 (986)
Q Consensus 548 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~lcg~ 612 (986)
++|+.|+|++|+|+ .+|..+..+++|++|+|++|++++.++. ...++.++.+++.+|++.|++
T Consensus 450 -~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 450 -PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp -TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCH
T ss_pred -CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCc
Confidence 79999999999999 6888778999999999999999987666 567788899999999999965
No 40
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.7e-46 Score=416.53 Aligned_cols=207 Identities=27% Similarity=0.356 Sum_probs=177.2
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC--chhHHHHHHHHHHHhcCCCCcceeeeeecccc-ccCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGV-DYQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~~~ 763 (986)
.++|++++.||+|+||+||+|++..+++.||||+++... ....+.+.+|+++|++++|||||++++++... .+.+.+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 468999999999999999999999999999999996432 23456788999999999999999999987543 245667
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..|+|||||+ |+|.+++. ..+.+++.+++.|+.||+.||+|||++ |||||||||+|||++.++.+|
T Consensus 133 ~~~ivmE~~~-g~L~~~i~----------~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~K 198 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIH----------SSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELK 198 (398)
T ss_dssp CEEEEEECCS-EEHHHHHT----------SSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEE
T ss_pred EEEEEEeCCC-CCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEE
Confidence 8999999995 68999995 235699999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCC--CccccccccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCc
Q 046598 844 IGDFGLARFLPLSS--AQTSSIGAKGSIGYIAPEYGLGS-EVSISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 844 L~DFG~a~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
|+|||+|+.+.... ........+||+.|||||++.+. .++.++||||+||++|||++|++||..
T Consensus 199 i~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g 265 (398)
T 4b99_A 199 IGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 265 (398)
T ss_dssp ECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred EeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCC
Confidence 99999998764322 12234457899999999998875 569999999999999999999999974
No 41
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.4e-44 Score=395.52 Aligned_cols=294 Identities=29% Similarity=0.453 Sum_probs=276.6
Q ss_pred cCCCHhHHHHHHHHHHhccCCCcCCCCCCCCCCCCCc--ceeeEecCCC--CeEEEEeccCCCCcc--ccCcCccCCCCC
Q 046598 15 VAGNETDRLALLELKSKITHDPLGVLASWNESSHFCQ--WRGVTCSRRH--QRVTILDLESLKLAG--SISPHVGNLSFL 88 (986)
Q Consensus 15 ~~~~~~~~~~ll~~k~~~~~~~~~~l~~w~~~~~~c~--w~gv~c~~~~--~~v~~l~l~~~~l~~--~~~~~~~~l~~L 88 (986)
+.|.++|++||++||+++. ||. .+++|+.+++||. |.||+|+..+ ++|+.|+|++++++| .+|+.|+++++|
T Consensus 1 ~~c~~~~~~aL~~~k~~~~-~~~-~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 1 ELCNPQDKQALLQIKKDLG-NPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CCSCHHHHHHHHHHHHHTT-CCG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCCHHHHHHHHHHHHhcC-Ccc-cccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 3699999999999999994 776 7899988889998 9999998765 799999999999999 999999999999
Q ss_pred CEEEccC-CCccccCCcchhccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEccC
Q 046598 89 KVLRLYN-NSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVND 167 (986)
Q Consensus 89 ~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 167 (986)
++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|..+++|++|+|++|.+++.+|..|.++++|++|+|++
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 158 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcC
Confidence 9999995 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCcccccCCCc-CcceeeccCCcccCcCcchhhccCCCceeecccccccccCCccccCCCCccEEecccccccccc
Q 046598 168 NNLTGSIPSSLGNLS-SIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGAI 246 (986)
Q Consensus 168 N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~ 246 (986)
|++++.+|..+++++ +|++|+|++|++++.+|..|..++ |++|+|++|++++.+|..+..+++|+.|++++|.+.+.+
T Consensus 159 N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 237 (313)
T 1ogq_A 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237 (313)
T ss_dssp SCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBG
T ss_pred CcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeec
Confidence 999999999999998 999999999999999999999998 999999999999999999999999999999999999887
Q ss_pred CCcccccccccceEEecCceecccCCccccCCCCCcEEecccccccCCCchhhhhhhHhhhhhccCC
Q 046598 247 PLDYGFSLQNLQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNS 313 (986)
Q Consensus 247 p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~ 313 (986)
|. +..+++|++|++++|++++.+|..+..+++|+.|++++|++++..|....+++|+.+++.+|.
T Consensus 238 ~~--~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 238 GK--VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK 302 (313)
T ss_dssp GG--CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSS
T ss_pred Cc--ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCC
Confidence 76 446899999999999999999999999999999999999999877776778888888777774
No 42
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.1e-45 Score=406.00 Aligned_cols=200 Identities=24% Similarity=0.338 Sum_probs=170.8
Q ss_pred HhhcCCCCCcccccccceeEEEEEEC---CCCeEEEEEEeeccCchhHHHHHHHHHHHhcC-CCCcceeeeeeccccccC
Q 046598 685 NATDRFSSVNQIGEGSFGSVFKGILD---DGRTTIAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQ 760 (986)
Q Consensus 685 ~~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 760 (986)
...++|++.++||+|+||+||+|+++ .+++.||||++.... ...++.+|+++++.+ +|||||+++++ +.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~-----~~ 90 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYC-----FR 90 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEE-----EE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEE-----EE
Confidence 45688999999999999999999874 357889999986543 346788999999988 69999999998 55
Q ss_pred CCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCC-
Q 046598 761 GNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDED- 839 (986)
Q Consensus 761 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~- 839 (986)
++++.|+||||+++|+|.+++. .+++.+++.++.||+.||+|||++ ||+||||||+|||++.+
T Consensus 91 ~~~~~~lvmE~~~g~~L~~~~~-------------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~ 154 (361)
T 4f9c_A 91 KNDHVVIAMPYLEHESFLDILN-------------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRL 154 (361)
T ss_dssp ETTEEEEEEECCCCCCHHHHHT-------------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTT
T ss_pred ECCEEEEEEeCCCcccHHHHHc-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCC
Confidence 6689999999999999999984 488999999999999999999999 99999999999999877
Q ss_pred CcEEEcccccceecCCCCCc--------------------------cccccccccccccccccccCC-CcCcccchhhHH
Q 046598 840 MIAHIGDFGLARFLPLSSAQ--------------------------TSSIGAKGSIGYIAPEYGLGS-EVSISGDVYSYG 892 (986)
Q Consensus 840 ~~~kL~DFG~a~~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG 892 (986)
+.+||+|||+|+........ ......+||+.|||||++.+. .|+.++||||+|
T Consensus 155 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG 234 (361)
T 4f9c_A 155 KKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAG 234 (361)
T ss_dssp TEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHH
T ss_pred CeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhH
Confidence 79999999999865432211 112345799999999998876 489999999999
Q ss_pred HHHHHHHhCCCCCCc
Q 046598 893 ILLLELITRKKPTDI 907 (986)
Q Consensus 893 vvl~elltg~~pf~~ 907 (986)
|++|||+||+.||..
T Consensus 235 ~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 235 VIFLSLLSGRYPFYK 249 (361)
T ss_dssp HHHHHHHHTCSSSSC
T ss_pred HHHHHHHHCCCCCCC
Confidence 999999999999953
No 43
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.6e-43 Score=410.33 Aligned_cols=377 Identities=19% Similarity=0.202 Sum_probs=281.1
Q ss_pred CCCCEEEccCCCccccCCcchhccccCceeeceecccCCCC-ccchhcCccccceecccccccCccCccccCCCCCCeEE
Q 046598 86 SFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAI-PANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHIS 164 (986)
Q Consensus 86 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 164 (986)
++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 78999999999999888999999999999999999997655 56789999999999999999988889999999999999
Q ss_pred ccCCcCCCCcccc--cCCCcCcceeeccCCcccCcCcch-hhccCCCceeecccccccccCCccccCCCCccEEeccccc
Q 046598 165 VNDNNLTGSIPSS--LGNLSSIRSLFLSGNNLEGSIPDT-LGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNK 241 (986)
Q Consensus 165 L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~ 241 (986)
|++|++++..|.. |+++++|++|+|++|++++..|.. |..+++|++|+|++|++++..|..+.++.
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~----------- 178 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQ----------- 178 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGT-----------
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccc-----------
Confidence 9999998766655 888999999999999998777766 78888888888888888876666655431
Q ss_pred cccccCCcccccccccceEEecCceecccCCccccCCCCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCC
Q 046598 242 IQGAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRD 321 (986)
Q Consensus 242 l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~ 321 (986)
..+|+.|++++|.+++..+..++.
T Consensus 179 ------------~~~L~~L~l~~n~l~~~~~~~~~~-------------------------------------------- 202 (455)
T 3v47_A 179 ------------GKHFTLLRLSSITLQDMNEYWLGW-------------------------------------------- 202 (455)
T ss_dssp ------------TCEEEEEECTTCBCTTCSTTCTTH--------------------------------------------
T ss_pred ------------cccccccccccCcccccchhhccc--------------------------------------------
Confidence 134455555555544322111100
Q ss_pred cccccccccccccceeeccccccccCCCcccccccccceEEEccCCcccccCCccccCC---CCCCEEEccCccccCcCC
Q 046598 322 LNFLCSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKF---VNLQRLDMCSNRLSGTIP 398 (986)
Q Consensus 322 l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~ 398 (986)
.....++.. ++|+.|++++|++++..|..+..+ ++|+.|++++|.+.+...
T Consensus 203 -------------------------~~~~~~~~~-~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~ 256 (455)
T 3v47_A 203 -------------------------EKCGNPFKN-TSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF 256 (455)
T ss_dssp -------------------------HHHCCTTTT-CEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT
T ss_pred -------------------------ccccccccc-ceeeeEecCCCcccccchhhhhccccccceeeEeecccccccccc
Confidence 000000111 356666777776666655555433 556666666665442210
Q ss_pred CcccCCCCCCEEEccCccceeecCcccccccccEEEecccccCCCCCcccCC--CCCCCeeecCCCccCCCCCcccccCC
Q 046598 399 PAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSYNFLQGSIPSSLGR--YETLTTIDLSNNNLTGTIPPQFIGLS 476 (986)
Q Consensus 399 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L~L~~N~l~~~ip~~~~~~~ 476 (986)
..+.+.+..+..+.. .++|+.|++++|++++.+|.. ++.+
T Consensus 257 -------------------------------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~-~~~l 298 (455)
T 3v47_A 257 -------------------------------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSV-FSHF 298 (455)
T ss_dssp -------------------------------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTT-TTTC
T ss_pred -------------------------------------chhhhccCcccccccccccCceEEEecCccccccchhh-cccC
Confidence 111122122222222 357888888888888555544 6777
Q ss_pred CcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeC
Q 046598 477 SSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDL 556 (986)
Q Consensus 477 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 556 (986)
++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|++|+|
T Consensus 299 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 378 (455)
T 3v47_A 299 TDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELAL 378 (455)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEEC
Confidence 88888888888888777888888889999999999998777888899999999999999999888889999999999999
Q ss_pred CCccCcccCchhhhcccccceeeccCCccccccCCcc
Q 046598 557 SQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPTQG 593 (986)
Q Consensus 557 s~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~ 593 (986)
++|+|++..+..+..+++|++|+|++|+++|.+|...
T Consensus 379 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 415 (455)
T 3v47_A 379 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 415 (455)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred CCCccccCCHhHhccCCcccEEEccCCCcccCCCcch
Confidence 9999998777788899999999999999999988653
No 44
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=6.5e-43 Score=403.25 Aligned_cols=387 Identities=25% Similarity=0.332 Sum_probs=214.3
Q ss_pred CCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccc-------------cceecccccccCcc
Q 046598 84 NLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNL-------------IQLRLFHNQLVGKI 150 (986)
Q Consensus 84 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-------------~~L~Ls~N~l~~~~ 150 (986)
..++|++|++++|++ +.+|.+|+++++|++|++++|+++|.+|..++.+++| ++|++++|.+++ +
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-l 86 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-L 86 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-C
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-C
Confidence 456677777777777 5677777777777777777777777777777776665 777777777764 3
Q ss_pred CccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceeecccccccccCCccccCCC
Q 046598 151 PSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNIS 230 (986)
Q Consensus 151 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 230 (986)
|.. .++|++|++++|++++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++++ +| .+.+++
T Consensus 87 p~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~ 153 (454)
T 1jl5_A 87 PEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSS 153 (454)
T ss_dssp CSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCT
T ss_pred CCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCC
Confidence 432 2567777777777775 4543 3667777777777764 3321 1567777777777774 56 477777
Q ss_pred CccEEeccccccccccCCcccccccccceEEecCceecccCCccccCCCCCcEEecccccccCCCchhhhhhhHhhhhhc
Q 046598 231 SITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGIL 310 (986)
Q Consensus 231 ~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~ 310 (986)
+|+.|++++|++.+ +|.. ..+|++|++++|++++ +| .++++++|+.|++++|++++++.
T Consensus 154 ~L~~L~l~~N~l~~-lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~-------------- 212 (454)
T 1jl5_A 154 FLKIIDVDNNSLKK-LPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPD-------------- 212 (454)
T ss_dssp TCCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCC--------------
T ss_pred CCCEEECCCCcCcc-cCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCC--------------
Confidence 77777777777764 4432 2467777777777775 44 46777777777777776654331
Q ss_pred cCCCCCCCCCCcccccccccccccceeeccccccccCCCcccccccccceEEEccCCcccccCCccccCCCCCCEEEccC
Q 046598 311 GNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCS 390 (986)
Q Consensus 311 ~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 390 (986)
. ..+|+.|++++|+++ .+| .++.+++|++|++++
T Consensus 213 ----------------------------------------~----~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~ 246 (454)
T 1jl5_A 213 ----------------------------------------L----PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADN 246 (454)
T ss_dssp ----------------------------------------C----CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCS
T ss_pred ----------------------------------------C----cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCC
Confidence 1 135667777777777 455 377777777777777
Q ss_pred ccccCcCCCcccCCCCCCEEEccCccceeecCcccccccccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCc
Q 046598 391 NRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPP 470 (986)
Q Consensus 391 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~ 470 (986)
|++++ +|.. +++|++|++++|++++ +|... .+|++|++++|++++. |.. .++|++|++++|++++ ++.
T Consensus 247 N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~~--~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~~ 314 (454)
T 1jl5_A 247 NLLKT-LPDL---PPSLEALNVRDNYLTD-LPELP--QSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LCD 314 (454)
T ss_dssp SCCSS-CCSC---CTTCCEEECCSSCCSC-CCCCC--TTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-ECC
T ss_pred CcCCc-cccc---ccccCEEECCCCcccc-cCccc--CcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-ccC
Confidence 77774 4432 3677777777777775 33332 3567777777777652 211 1467777777777763 332
Q ss_pred ccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccccEEecccccccc--cCCccccCC
Q 046598 471 QFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQG--PIPSSLSSL 548 (986)
Q Consensus 471 ~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l 548 (986)
..++|+.|++++|++++ +|.. +++|+.|++++|+++ .+|. .+++|++|++++|++++ .+|.++..+
T Consensus 315 ----~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L 382 (454)
T 1jl5_A 315 ----LPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDL 382 (454)
T ss_dssp ----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE
T ss_pred ----CcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhh
Confidence 12467777777777774 5543 466777777777777 4555 35677777777777776 455554432
Q ss_pred CCCCEEeCCCccCcccCchhhhcccccceeeccCCcccc
Q 046598 549 RGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEG 587 (986)
Q Consensus 549 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 587 (986)
+.|.+.+.+|.. +++|++|++++|++++
T Consensus 383 --------~~n~~~~~i~~~---~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 383 --------RMNSHLAEVPEL---PQNLKQLHVETNPLRE 410 (454)
T ss_dssp --------ECCC---------------------------
T ss_pred --------hhcccccccccc---cCcCCEEECCCCcCCc
Confidence 345555555553 3677778888888877
No 45
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.2e-43 Score=409.61 Aligned_cols=245 Identities=22% Similarity=0.240 Sum_probs=194.5
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---chhHHHH---HHHHHHHhcCCCCcceeeeeeccccccC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---HGAFKSF---IAECNTLKNIRHRNLVKILTACSGVDYQ 760 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~---~~E~~~l~~l~h~niv~l~~~~~~~~~~ 760 (986)
.++|++.+.||+|+||+||+|+++.+++.||||+++... ....... ..++.+++.++|||||+++++ ++
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~-----f~ 262 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA-----FH 262 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEE-----EE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEE-----EE
Confidence 357999999999999999999999999999999996421 1122223 344677788899999999999 66
Q ss_pred CCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCC
Q 046598 761 GNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDM 840 (986)
Q Consensus 761 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 840 (986)
+.+..|+||||++||+|.+++.. .+.+++..++.|+.||+.||+|||++ |||||||||+|||++.+|
T Consensus 263 ~~~~lylVmEy~~GGdL~~~l~~----------~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G 329 (689)
T 3v5w_A 263 TPDKLSFILDLMNGGDLHYHLSQ----------HGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHG 329 (689)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHH----------HCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTS
T ss_pred ECCEEEEEEecCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCC
Confidence 77899999999999999999952 34699999999999999999999999 999999999999999999
Q ss_pred cEEEcccccceecCCCCCccccccccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHH
Q 046598 841 IAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG-SEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLA 919 (986)
Q Consensus 841 ~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~ 919 (986)
++||+|||+|+.+.... ....+||+.|||||++.+ ..|+.++||||+||++|||++|++||......+ .....
T Consensus 330 ~vKL~DFGlA~~~~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~~i~ 403 (689)
T 3v5w_A 330 HVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEID 403 (689)
T ss_dssp CEEECCCTTCEECSSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HHHHH
T ss_pred CEEecccceeeecCCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHH
Confidence 99999999998764332 234689999999999964 579999999999999999999999996432211 11111
Q ss_pred HhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCC
Q 046598 920 RTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSM 983 (986)
Q Consensus 920 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 983 (986)
.. .+...+. .+...+.++.+++.+|++.||++|++.
T Consensus 404 ~~------------i~~~~~~----------------~p~~~S~~a~dLI~~lL~~dP~~Rl~~ 439 (689)
T 3v5w_A 404 RM------------TLTMAVE----------------LPDSFSPELRSLLEGLLQRDVNRRLGC 439 (689)
T ss_dssp HH------------HHHCCCC----------------CCTTSCHHHHHHHHHHTCSCGGGCTTC
T ss_pred Hh------------hcCCCCC----------------CCccCCHHHHHHHHHHccCCHhHCCCC
Confidence 10 0000000 000123456799999999999999984
No 46
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.9e-43 Score=415.29 Aligned_cols=250 Identities=21% Similarity=0.294 Sum_probs=204.8
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
.++|++.+.||+|+||+||+|+++.+++.||+|++........+.+.+|+++|+.++|||||+++++ +.++...|
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~-----~~~~~~~~ 230 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA-----FEDDNEMV 230 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEE-----EECSSEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEE-----EEECCEEE
Confidence 4689999999999999999999999999999999987666667789999999999999999999999 56678999
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCC--CcEEE
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDED--MIAHI 844 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kL 844 (986)
+|||||+||+|.+++. .....+++.+++.++.||+.||+|||++ +|+||||||+|||++.+ +.+||
T Consensus 231 iv~E~~~gg~L~~~i~---------~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl 298 (573)
T 3uto_A 231 MIYEFMSGGELFEKVA---------DEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKL 298 (573)
T ss_dssp EEEECCCCCBHHHHHT---------CTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEE
T ss_pred EEEeecCCCcHHHHHH---------HhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEE
Confidence 9999999999999995 2234699999999999999999999999 99999999999999854 89999
Q ss_pred cccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCC
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALP 924 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 924 (986)
+|||+|+.+.... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......
T Consensus 299 ~DFG~a~~~~~~~---~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~-----~~~~~~--- 367 (573)
T 3uto_A 299 IDFGLTAHLDPKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND-----DETLRN--- 367 (573)
T ss_dssp CCCSSCEECCTTS---EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHHHHH---
T ss_pred eeccceeEccCCC---ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHHHHH---
Confidence 9999999875332 23346799999999999999999999999999999999999999963221 111110
Q ss_pred CchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCC
Q 046598 925 DHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTN 985 (986)
Q Consensus 925 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~e 985 (986)
+....... +.. .....+.++.+|+.+||+.||++|||++|
T Consensus 368 -----i~~~~~~~-~~~---------------~~~~~s~~~~dli~~~L~~dp~~R~t~~e 407 (573)
T 3uto_A 368 -----VKSCDWNM-DDS---------------AFSGISEDGKDFIRKLLLADPNTRMTIHQ 407 (573)
T ss_dssp -----HHTTCCCC-CSG---------------GGTTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred -----HHhCCCCC-Ccc---------------cccCCCHHHHHHHHHHccCChhHCcCHHH
Confidence 00000000 000 00012345678999999999999999876
No 47
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=9.5e-42 Score=393.50 Aligned_cols=403 Identities=23% Similarity=0.284 Sum_probs=255.8
Q ss_pred CcchhccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCc
Q 046598 103 PSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLS 182 (986)
Q Consensus 103 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 182 (986)
|+.+. .++|++|++++|.+ |.+|.+|+++++|++|++++|.+.|.+|..++++++|+.+++.+|.. .
T Consensus 5 p~~~~-~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~ 71 (454)
T 1jl5_A 5 PRNVS-NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------R 71 (454)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------H
T ss_pred ccccc-cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------c
Confidence 45554 58999999999999 69999999999999999999999999999999999886666655532 3
Q ss_pred CcceeeccCCcccCcCcchhhccCCCceeecccccccccCCccccCCCCccEEeccccccccccCCcccccccccceEEe
Q 046598 183 SIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSV 262 (986)
Q Consensus 183 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L 262 (986)
++++|++++|.+++ +|.. .++|++|++++|++++ +|.. +++|+.|++++|.+.+ +|.. .++|++|++
T Consensus 72 ~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~----~~~L~~L~L 138 (454)
T 1jl5_A 72 QAHELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL----PPLLEYLGV 138 (454)
T ss_dssp TCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC----CTTCCEEEC
T ss_pred CCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC----CCCCCEEEC
Confidence 56666666666663 3331 3566666676666664 5543 2566667777666653 2221 256778888
Q ss_pred cCceecccCCccccCCCCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeecccc
Q 046598 263 GENQLTGAIPPTISNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININ 342 (986)
Q Consensus 263 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n 342 (986)
++|++++ +| .++++++|++|++++|++++++... .+|+.|+++.|
T Consensus 139 ~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~~~---------------------------------~~L~~L~L~~n 183 (454)
T 1jl5_A 139 SNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPDLP---------------------------------PSLEFIAAGNN 183 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCCCCC---------------------------------TTCCEEECCSS
T ss_pred cCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccCCCc---------------------------------ccccEEECcCC
Confidence 8888775 56 5788888888888888777654321 25666667777
Q ss_pred ccccCCCcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecC
Q 046598 343 NFGGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIP 422 (986)
Q Consensus 343 ~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 422 (986)
.+++ +| .+..+ ++|+.|++++|++++ +|... ++|++|++++|.++ .+| .|..+++|++|++++|++++ +|
T Consensus 184 ~l~~-l~-~~~~l-~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~ 253 (454)
T 1jl5_A 184 QLEE-LP-ELQNL-PFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LP 253 (454)
T ss_dssp CCSS-CC-CCTTC-TTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CC
T ss_pred cCCc-Cc-cccCC-CCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cc
Confidence 6665 55 34444 678999999999986 44332 58999999999998 666 48899999999999999986 44
Q ss_pred cccccccccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccc
Q 046598 423 PSIGNLKLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKN 502 (986)
Q Consensus 423 ~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 502 (986)
... .+|++|++++|++++ +|.. +++|+.|++++|++++ +|. ..++|+.|++++|++++ ++.. .++
T Consensus 254 ~~~--~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l~~----~~~~L~~L~l~~N~l~~-i~~~---~~~ 318 (454)
T 1jl5_A 254 DLP--PSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-LSE----LPPNLYYLNASSNEIRS-LCDL---PPS 318 (454)
T ss_dssp SCC--TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-ESC----CCTTCCEEECCSSCCSE-ECCC---CTT
T ss_pred ccc--cccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc-ccC----cCCcCCEEECcCCcCCc-ccCC---cCc
Confidence 432 468999999999986 5553 3789999999999984 332 12679999999999985 3321 258
Q ss_pred cchhhccCccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcc--cCchhhhcccccceeec
Q 046598 503 LEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSG--KIPELLIRLQLVKNLNL 580 (986)
Q Consensus 503 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~l~l 580 (986)
|++|++++|++++ +|.. +++|++|++++|++++ +|. .+++|++|+|++|++++ .+|..+.. |
T Consensus 319 L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L 382 (454)
T 1jl5_A 319 LEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------L 382 (454)
T ss_dssp CCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------E
T ss_pred CCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------h
Confidence 9999999999985 6654 5789999999999984 666 47899999999999998 67776553 3
Q ss_pred cCCccccccCCccccccccceeeeCCccc
Q 046598 581 SNNDLEGVVPTQGVFKNASITSVFGNLKL 609 (986)
Q Consensus 581 s~N~l~~~~p~~~~~~~~~~~~~~~n~~l 609 (986)
+.|.+.|.+|.. .++++.+++.+|+..
T Consensus 383 ~~n~~~~~i~~~--~~~L~~L~ls~N~l~ 409 (454)
T 1jl5_A 383 RMNSHLAEVPEL--PQNLKQLHVETNPLR 409 (454)
T ss_dssp ECCC-------------------------
T ss_pred hhcccccccccc--cCcCCEEECCCCcCC
Confidence 457788888764 577888889888654
No 48
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.4e-41 Score=371.10 Aligned_cols=249 Identities=21% Similarity=0.279 Sum_probs=203.9
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
.++|++.+.||+|+||+||+|.+..+++.||||++........+.+.+|+.++++++||||+++++++ ..++..+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~ 93 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY-----LVGDELW 93 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEE-----EECCEEE
Confidence 46899999999999999999999988999999999876666678899999999999999999999984 4457899
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEcc
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIGD 846 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 846 (986)
+||||+++|+|.+++.. ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 94 lv~e~~~~~~L~~~~~~-----------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~D 159 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVTE-----------TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTD 159 (297)
T ss_dssp EEEECCTTCBHHHHHHH-----------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECC
T ss_pred EEEECCCCCCHHHHHhh-----------cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEee
Confidence 99999999999999952 2488999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCc
Q 046598 847 FGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALPDH 926 (986)
Q Consensus 847 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 926 (986)
||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .........+.
T Consensus 160 fg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~- 235 (297)
T 3fxz_A 160 FGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTPE- 235 (297)
T ss_dssp CTTCEECCSTTC--CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHHCSCC-
T ss_pred CCCceecCCccc--ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCCC-
Confidence 999987643322 23346799999999999999999999999999999999999999963211100 00000000000
Q ss_pred hhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 927 VMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 927 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. ......+..+.+++.+||+.||++|||++|+
T Consensus 236 ------------~----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~el 267 (297)
T 3fxz_A 236 ------------L----------------QNPEKLSAIFRDFLNRCLEMDVEKRGSAKEL 267 (297)
T ss_dssp ------------C----------------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred ------------C----------------CCccccCHHHHHHHHHHccCChhHCcCHHHH
Confidence 0 0011234457799999999999999998764
No 49
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.5e-41 Score=375.85 Aligned_cols=275 Identities=33% Similarity=0.486 Sum_probs=215.9
Q ss_pred ChHHHHHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccc
Q 046598 679 SYQNLYNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD 758 (986)
Q Consensus 679 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 758 (986)
++.++...+++|++.+.||+|+||.||+|++.. ++.||||++........+.+.+|++++++++||||++++++|
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~---- 104 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD-GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC---- 104 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTT-CCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEEC----
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECC-CCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEE----
Confidence 334555678899999999999999999999764 789999998776666678899999999999999999999994
Q ss_pred cCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecC
Q 046598 759 YQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDE 838 (986)
Q Consensus 759 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 838 (986)
..++..++||||+++|+|.+++.... .....+++.+++.++.|++.||+|||++ +|+||||||+||+++.
T Consensus 105 -~~~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~ 174 (321)
T 2qkw_B 105 -DERNEMILIYKYMENGNLKRHLYGSD------LPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDE 174 (321)
T ss_dssp -CCTTCCEEEEECCTTCBTGGGSSSSC------CCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECT
T ss_pred -cCCCeEEEEEEcCCCCcHHHHHhccC------CCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECC
Confidence 45678999999999999999996332 2234689999999999999999999999 9999999999999999
Q ss_pred CCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCcccccc-ccHHH
Q 046598 839 DMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGD-MNLHN 917 (986)
Q Consensus 839 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~-~~~~~ 917 (986)
++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .....
T Consensus 175 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~ 254 (321)
T 2qkw_B 175 NFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE 254 (321)
T ss_dssp TCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHH
T ss_pred CCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHH
Confidence 99999999999987543333333344568999999999988899999999999999999999999997543322 12222
Q ss_pred HHHh-hCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 918 LART-ALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 918 ~~~~-~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+... .....+...+++.+. .....+++.++.+++.+||+.||++|||++||
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el 306 (321)
T 2qkw_B 255 WAVESHNNGQLEQIVDPNLA------------------DKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306 (321)
T ss_dssp HTHHHHTTTCCCSSSSSSCT------------------TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HhhhccccccHHHhcChhhc------------------cccCHHHHHHHHHHHHHHcCCCcccCcCHHHH
Confidence 2111 111111111111111 01123567788999999999999999999764
No 50
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3e-41 Score=374.38 Aligned_cols=283 Identities=34% Similarity=0.557 Sum_probs=221.8
Q ss_pred CCCCCcChHHHHHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc-hhHHHHHHHHHHHhcCCCCcceeee
Q 046598 673 NSFPNISYQNLYNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH-GAFKSFIAECNTLKNIRHRNLVKIL 751 (986)
Q Consensus 673 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~ 751 (986)
.....+++.++....++|++.+.||+|+||.||+|.+.. ++.||||+++.... .....+.+|++++++++||||++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 93 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD-GTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 93 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSS-SCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecC-CCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence 345678999999999999999999999999999998654 78999999865332 2234789999999999999999999
Q ss_pred eeccccccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCC
Q 046598 752 TACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKP 831 (986)
Q Consensus 752 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 831 (986)
++| ......++||||+++|+|.+++.... .....+++..+..|+.|++.||+|||+.+.++|+||||||
T Consensus 94 ~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp 162 (326)
T 3uim_A 94 GFC-----MTPTERLLVYPYMANGSVASCLRERP------ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKA 162 (326)
T ss_dssp EEE-----CCSSCCEEEEECCTTCBHHHHHHCCS------TTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSG
T ss_pred EEE-----ecCCceEEEEEeccCCCHHHHHHhcc------ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCch
Confidence 995 45577899999999999999997433 2234699999999999999999999998777999999999
Q ss_pred CCeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccc--
Q 046598 832 SNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMF-- 909 (986)
Q Consensus 832 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~-- 909 (986)
+||+++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||+...
T Consensus 163 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 241 (326)
T 3uim_A 163 ANILLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 241 (326)
T ss_dssp GGEEECTTCCEEECCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHT
T ss_pred hhEEECCCCCEEeccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccc
Confidence 999999999999999999987643322 22334569999999999988899999999999999999999999996321
Q ss_pred -cccccHHHHHHhhCCCc-hhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 910 -EGDMNLHNLARTALPDH-VMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 910 -~~~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
........+........ .....+..+.. ....+.+..+.+++.+||+.||++|||++||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~li~~cl~~dP~~Rps~~el 302 (326)
T 3uim_A 242 NDDDVMLLDWVKGLLKEKKLEALVDVDLQG------------------NYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302 (326)
T ss_dssp TTSCSBHHHHHTTTTSSCCSTTSSCTTCTT------------------SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHH
T ss_pred cccchhHHHHHHHHhhchhhhhhcChhhcc------------------ccCHHHHHHHHHHHHHHhCcCCccCCCHHHH
Confidence 12222333333222221 22222221111 1123566789999999999999999999764
No 51
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=7.7e-41 Score=389.44 Aligned_cols=384 Identities=21% Similarity=0.233 Sum_probs=275.3
Q ss_pred CCCccee--eEecCCC--------CeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccC-CcchhccccCceee
Q 046598 48 HFCQWRG--VTCSRRH--------QRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEI-PSEFDRLRRLQVLA 116 (986)
Q Consensus 48 ~~c~w~g--v~c~~~~--------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~ 116 (986)
..|.|.+ |.|+... .+++.|||++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 4466666 8887643 56999999999999888999999999999999999998655 67899999999999
Q ss_pred ceecccCCCCccchhcCccccceecccccccCccCcc--ccCCCCCCeEEccCCcCCCCcccc-cCCCcCcceeeccCCc
Q 046598 117 LHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSE--LSSLSKIEHISVNDNNLTGSIPSS-LGNLSSIRSLFLSGNN 193 (986)
Q Consensus 117 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~ 193 (986)
|++|++++..|..|+.+++|++|+|++|.+++.+|.. |+++++|++|+|++|++++..|.. |.++++|++|+|++|+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999888999999999999999999999866655 999999999999999999888876 8999999999999999
Q ss_pred ccCcCcchhhcc--CCCceeecccccccccCCccccCCCCccEEeccccccccccCCcccccccccceEEecCceecccC
Q 046598 194 LEGSIPDTLGWL--KNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAI 271 (986)
Q Consensus 194 l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~ 271 (986)
+++..|..+..+ .+|+.|++++|.+++..+..+.. .... ....+++|++|++++|++++..
T Consensus 166 l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~----------------~~~~-~~~~~~~L~~L~Ls~n~l~~~~ 228 (455)
T 3v47_A 166 VKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW----------------EKCG-NPFKNTSITTLDLSGNGFKESM 228 (455)
T ss_dssp BSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------HHHC-CTTTTCEEEEEECTTSCCCHHH
T ss_pred ccccChhhhhccccccccccccccCcccccchhhccc----------------cccc-cccccceeeeEecCCCcccccc
Confidence 999999999887 78999999999998654433220 0000 0112445666666666666555
Q ss_pred CccccCC---CCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCC
Q 046598 272 PPTISNA---SNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSL 348 (986)
Q Consensus 272 p~~l~~l---~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~ 348 (986)
|..+... ++|+.+++++|.+.+.... . +.+.+..
T Consensus 229 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~-------------~------------------------------~~~~~~~ 265 (455)
T 3v47_A 229 AKRFFDAIAGTKIQSLILSNSYNMGSSFG-------------H------------------------------TNFKDPD 265 (455)
T ss_dssp HHHHHHHTTTCCEEEEECTTCTTTSCCTT-------------C------------------------------CSSCCCC
T ss_pred hhhhhccccccceeeEeeccccccccccc-------------h------------------------------hhhccCc
Confidence 5554433 6666666666655432110 0 0000001
Q ss_pred Ccccccc-cccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCccccc
Q 046598 349 PACISNL-STTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGN 427 (986)
Q Consensus 349 p~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 427 (986)
+..+..+ ..+|+.|++++|++++..|..|..+++|++|++++|.+++..|..|..+++|++|+|++|++++..|..+..
T Consensus 266 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 345 (455)
T 3v47_A 266 NFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFEN 345 (455)
T ss_dssp TTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTT
T ss_pred ccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcC
Confidence 1111111 145777888888887777777888888888888888888777777777887777777777777655555543
Q ss_pred c-cccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCccccc
Q 046598 428 L-KLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGS 492 (986)
Q Consensus 428 ~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~ 492 (986)
+ +|++|+|++|++++..|..|..+++|++|+|++|+|+ .+|...+..+++|+.|++++|++++.
T Consensus 346 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 346 LDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cccCCEEECCCCcccccChhhccccccccEEECCCCccc-cCCHhHhccCCcccEEEccCCCcccC
Confidence 3 3666666666665555555666666666666666665 34444445555555555555555543
No 52
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.7e-41 Score=371.77 Aligned_cols=253 Identities=24% Similarity=0.372 Sum_probs=204.3
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
.++|.+.+.||+|+||+||+|.+..+++.||+|++........+.+.+|++++++++||||+++++++ .++...+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~ 83 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL-----YKDKRLN 83 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEE-----ecCCeeE
Confidence 46799999999999999999999999999999998776667778899999999999999999999995 4457899
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEcc
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIGD 846 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 846 (986)
+||||+++++|.++++. ....+++.++..|+.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 84 lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~D 151 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKS---------MDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVAD 151 (310)
T ss_dssp EEEECCTTCBHHHHHHH---------CCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECC
T ss_pred EEEEecCCCcHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEee
Confidence 99999999999999963 234689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcc------------ccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCcccccccc
Q 046598 847 FGLARFLPLSSAQT------------SSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMN 914 (986)
Q Consensus 847 FG~a~~~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~ 914 (986)
||+++......... ......||+.|+|||++.+..++.++|||||||++|||++|..||.........
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~ 231 (310)
T 3s95_A 152 FGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD 231 (310)
T ss_dssp CTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT
T ss_pred cccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH
Confidence 99998764332211 111456999999999999999999999999999999999999998643322111
Q ss_pred HHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 915 LHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 915 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.. .......+.... ..++.++.+++.+||+.||++|||++||
T Consensus 232 ~~--------~~~~~~~~~~~~----------------------~~~~~~l~~li~~~l~~dP~~Rps~~~l 273 (310)
T 3s95_A 232 FG--------LNVRGFLDRYCP----------------------PNCPPSFFPITVRCCDLDPEKRPSFVKL 273 (310)
T ss_dssp SS--------BCHHHHHHHTCC----------------------TTCCTTHHHHHHHHTCSSGGGSCCHHHH
T ss_pred Hh--------hhhhccccccCC----------------------CCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 10 011111111110 1223457789999999999999998764
No 53
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=5.6e-41 Score=370.61 Aligned_cols=252 Identities=21% Similarity=0.300 Sum_probs=201.0
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc-hhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH-GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
.++|++.+.||+|+||+||+|++..+++.||||++..... ...+.+.+|+.+++.++||||++++++ +..++..
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~-----~~~~~~~ 80 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH-----RREGNIQ 80 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEE-----EECSSEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEE-----EecCCeE
Confidence 4689999999999999999999998899999999864332 234668899999999999999999999 4556889
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEc
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIG 845 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 845 (986)
++||||+++|+|.+++. ....+++.+++.++.||+.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 81 ~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~ 147 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIE----------PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKIS 147 (323)
T ss_dssp EEEEECCTTEEGGGGSB----------TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEcCCCCcHHHHHh----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEE
Confidence 99999999999999984 234589999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCccccccccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCC
Q 046598 846 DFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEV-SISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALP 924 (986)
Q Consensus 846 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 924 (986)
|||+++.+.............||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.........+..+......
T Consensus 148 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~ 227 (323)
T 3tki_A 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 227 (323)
T ss_dssp CCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT
T ss_pred EeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc
Confidence 9999987643333333445679999999999988775 789999999999999999999997433322222111111000
Q ss_pred CchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 925 DHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 925 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..+ ....+.++.+++.+||+.||++|||++|+
T Consensus 228 ------------~~~------------------~~~~~~~~~~li~~~L~~dP~~R~t~~ei 259 (323)
T 3tki_A 228 ------------LNP------------------WKKIDSAPLALLHKILVENPSARITIPDI 259 (323)
T ss_dssp ------------STT------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred ------------CCc------------------cccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 000 01223456789999999999999998763
No 54
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=6.1e-41 Score=370.28 Aligned_cols=247 Identities=21% Similarity=0.299 Sum_probs=201.3
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
..++|++.+.||+|+||.||+|++..+++.||||++... .....+++.+|+++++.++||||+++++++ ...+
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-----~~~~ 87 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI-----ETEK 87 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECC
Confidence 457899999999999999999999988999999999753 334456788999999999999999999994 5568
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..|+||||+++|+|.+++.. .+.+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~----------~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~k 154 (328)
T 3fe3_A 88 TLYLIMEYASGGEVFDYLVA----------HGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIK 154 (328)
T ss_dssp EEEEEECCCTTCBHHHHHHH----------HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred EEEEEEECCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEE
Confidence 89999999999999999952 24589999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccCCCcC-cccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVS-ISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
|+|||+++...... .....+||+.|+|||++.+..++ .++||||+||++|||++|+.||.... ......
T Consensus 155 l~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~-- 224 (328)
T 3fe3_A 155 IADFGFSNEFTVGG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-----LKELRE-- 224 (328)
T ss_dssp ECSTTCCGGGSSSC---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHH--
T ss_pred EeeccCceecCCCC---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-----HHHHHH--
Confidence 99999998654322 23446799999999999888765 89999999999999999999996321 111111
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
......+.. +...+.++.+++.+||+.||++|||++|+
T Consensus 225 ----------~i~~~~~~~----------------p~~~s~~~~~li~~~L~~dP~~R~t~~ei 262 (328)
T 3fe3_A 225 ----------RVLRGKYRI----------------PFYMSTDCENLLKRFLVLNPIKRGTLEQI 262 (328)
T ss_dssp ----------HHHHCCCCC----------------CTTSCHHHHHHHHHHCCSSTTTSCCHHHH
T ss_pred ----------HHHhCCCCC----------------CCCCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 111010000 00123456789999999999999998763
No 55
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.9e-41 Score=371.76 Aligned_cols=249 Identities=24% Similarity=0.285 Sum_probs=192.8
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
..++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++ ...+.
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~-----~~~~~ 82 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL-----ETANK 82 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EeCCE
Confidence 4678999999999999999999999999999999986533 23346789999999999999999999994 55678
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHI 844 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 844 (986)
.++||||+++|+|.+++.. ...+++.+++.++.||+.||+|||+. +|+||||||+||++++++.+||
T Consensus 83 ~~lv~E~~~gg~L~~~l~~----------~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL 149 (347)
T 3zgw_A 83 IFMVLEYCPGGELFDYIIS----------QDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKL 149 (347)
T ss_dssp EEEEEECCTTCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEE
T ss_pred EEEEEeCCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEE
Confidence 9999999999999999952 24589999999999999999999999 9999999999999999999999
Q ss_pred cccccceecCCCCCccccccccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhC
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEV-SISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTAL 923 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 923 (986)
+|||++........ .......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.... ......
T Consensus 150 ~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-----~~~~~~--- 220 (347)
T 3zgw_A 150 IDFGLCAKPKGNKD-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN-----VMALYK--- 220 (347)
T ss_dssp CCCTTCBC---------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHH---
T ss_pred EeccCcccccCCCC-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHH---
Confidence 99999976532221 22334679999999999988775 899999999999999999999996321 111111
Q ss_pred CCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 924 PDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 924 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+..... ..+ ...+.++.+++.+||+.||++|||++|+
T Consensus 221 -----~i~~~~~-~~p-------------------~~~s~~~~~li~~~L~~dP~~Rps~~ei 258 (347)
T 3zgw_A 221 -----KIMRGKY-DVP-------------------KWLSPSSILLLQQMLQVDPKKRISMKNL 258 (347)
T ss_dssp -----HHHHTCC-CCC-------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -----HHHcCCC-CCC-------------------CCCCHHHHHHHHHHcccCHhHCcCHHHH
Confidence 0000000 000 0123446789999999999999998764
No 56
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.3e-40 Score=363.40 Aligned_cols=260 Identities=21% Similarity=0.268 Sum_probs=209.2
Q ss_pred CCcChHHHHHhhcC----------CCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCC
Q 046598 676 PNISYQNLYNATDR----------FSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHR 745 (986)
Q Consensus 676 ~~~~~~~~~~~~~~----------y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 745 (986)
+.++++++..+++. |+..+.||+|+||.||+|++..+++.||||+++.......+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45778888777764 67778999999999999999988999999999876666678899999999999999
Q ss_pred cceeeeeeccccccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 046598 746 NLVKILTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIA 825 (986)
Q Consensus 746 niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iv 825 (986)
||+++++++ ...+..++||||+++++|.+++.. ..+++.++..++.|++.||+|||+. +|+
T Consensus 103 niv~~~~~~-----~~~~~~~lv~e~~~~~~L~~~l~~-----------~~l~~~~~~~i~~qi~~~L~~LH~~---~iv 163 (321)
T 2c30_A 103 NVVEMYKSY-----LVGEELWVLMEFLQGGALTDIVSQ-----------VRLNEEQIATVCEAVLQALAYLHAQ---GVI 163 (321)
T ss_dssp TBCCEEEEE-----EETTEEEEEECCCCSCBHHHHHTT-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred CcceEEEEE-----EECCEEEEEEecCCCCCHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHHC---Cee
Confidence 999999985 345789999999999999999851 3589999999999999999999999 999
Q ss_pred eecCCCCCeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCC
Q 046598 826 HCDLKPSNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPT 905 (986)
Q Consensus 826 H~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf 905 (986)
||||||+||+++.++.+||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 164 H~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf 241 (321)
T 2c30_A 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY 241 (321)
T ss_dssp CCCCSGGGEEECTTCCEEECCCTTCEECCSSS--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred cCCCCHHHEEECCCCcEEEeeeeeeeecccCc--cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999998764322 2223457999999999999999999999999999999999999998
Q ss_pred CccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCC
Q 046598 906 DIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTN 985 (986)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~e 985 (986)
...... ..........+... ......+.++.+++.+||+.||++|||++|
T Consensus 242 ~~~~~~--~~~~~~~~~~~~~~----------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~e 291 (321)
T 2c30_A 242 FSDSPV--QAMKRLRDSPPPKL----------------------------KNSHKVSPVLRDFLERMLVRDPQERATAQE 291 (321)
T ss_dssp TTSCHH--HHHHHHHHSSCCCC----------------------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred CCCCHH--HHHHHHhcCCCCCc----------------------------CccccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 632111 00001110000000 000122345778999999999999999876
Q ss_pred C
Q 046598 986 V 986 (986)
Q Consensus 986 V 986 (986)
|
T Consensus 292 l 292 (321)
T 2c30_A 292 L 292 (321)
T ss_dssp H
T ss_pred H
Confidence 4
No 57
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.4e-40 Score=367.85 Aligned_cols=275 Identities=23% Similarity=0.310 Sum_probs=204.7
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
..++|++.+.||+|+||+||+|++. ++.||||+++... .......+|+.++++++||||+++++++... .......
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-~~~~~~~ 97 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRG-TSVDVDL 97 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEE-CSSSEEE
T ss_pred chhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccC-CCCCceE
Confidence 3578999999999999999999987 5899999997543 3335567799999999999999999997543 1224568
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhc-------CCCCeEeecCCCCCeEecC
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHD-------CQPPIAHCDLKPSNILLDE 838 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-------~~~~ivH~Dlkp~NIll~~ 838 (986)
++||||+++|+|.++++. ..+++.+++.++.|++.||+|||+. +.++|+||||||+||+++.
T Consensus 98 ~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~ 166 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKA-----------NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKN 166 (322)
T ss_dssp EEEEECCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECT
T ss_pred EEEEecCCCCCHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECC
Confidence 999999999999999952 2489999999999999999999975 1348999999999999999
Q ss_pred CCcEEEcccccceecCCCCCccccccccccccccccccccC-----CCcCcccchhhHHHHHHHHHhCCCCCCccccccc
Q 046598 839 DMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG-----SEVSISGDVYSYGILLLELITRKKPTDIMFEGDM 913 (986)
Q Consensus 839 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~ 913 (986)
++.+||+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||+||+.||........
T Consensus 167 ~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~ 246 (322)
T 3soc_A 167 NLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYM 246 (322)
T ss_dssp TCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCC
T ss_pred CCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhc
Confidence 99999999999987765444434445679999999999887 3567889999999999999999999975433221
Q ss_pred -cHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 914 -NLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 914 -~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+..... . .....++.+......... ..........++.++.+++.+||+.||++||||+||
T Consensus 247 ~~~~~~~~-~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el 309 (322)
T 3soc_A 247 LPFEEEIG-Q-HPSLEDMQEVVVHKKKRP---------VLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCV 309 (322)
T ss_dssp CTTHHHHC-S-SCCHHHHHHHHTTSCCCC---------CCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cchhhhhc-c-CCchhhhhhhhhcccCCC---------CccccccccchHHHHHHHHHHHccCChhhCcCHHHH
Confidence 1111100 0 111112211111111000 000011112455678899999999999999999764
No 58
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=5.9e-40 Score=366.67 Aligned_cols=251 Identities=20% Similarity=0.248 Sum_probs=202.0
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCch------hHHHHHHHHHHHhcCCCCcceeeeeecccccc
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHG------AFKSFIAECNTLKNIRHRNLVKILTACSGVDY 759 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 759 (986)
..++|++.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|+.++++++||||++++++ +
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~-----~ 84 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDV-----Y 84 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEE-----E
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEE-----E
Confidence 356899999999999999999999999999999999753322 34678999999999999999999999 4
Q ss_pred CCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCC
Q 046598 760 QGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDED 839 (986)
Q Consensus 760 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 839 (986)
.+....++||||+++|+|.+++.. ...+++.++..++.||+.||+|||+. ||+||||||+||+++.+
T Consensus 85 ~~~~~~~lv~e~~~gg~L~~~l~~----------~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~ 151 (361)
T 2yab_A 85 ENRTDVVLILELVSGGELFDFLAQ----------KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDK 151 (361)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHTT----------CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCT
T ss_pred EeCCEEEEEEEcCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCC
Confidence 566889999999999999999942 34689999999999999999999999 99999999999999887
Q ss_pred C----cEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccH
Q 046598 840 M----IAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNL 915 (986)
Q Consensus 840 ~----~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~ 915 (986)
+ .+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|+|++|..||.....
T Consensus 152 ~~~~~~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~----- 223 (361)
T 2yab_A 152 NIPIPHIKLIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK----- 223 (361)
T ss_dssp TSSSCCEEECCCSSCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----
T ss_pred CCCccCEEEEecCCceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----
Confidence 7 79999999998764322 22345699999999999999999999999999999999999999963211
Q ss_pred HHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 916 HNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 916 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
...... +..... ... .......+.++.+++.+|+..||++|||++|+
T Consensus 224 ~~~~~~--------i~~~~~--~~~--------------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~ 270 (361)
T 2yab_A 224 QETLAN--------ITAVSY--DFD--------------EEFFSQTSELAKDFIRKLLVKETRKRLTIQEA 270 (361)
T ss_dssp HHHHHH--------HHTTCC--CCC--------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred HHHHHH--------HHhcCC--CCC--------------chhccCCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 111110 000000 000 00011234457799999999999999998763
No 59
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2e-39 Score=356.46 Aligned_cols=275 Identities=31% Similarity=0.479 Sum_probs=216.8
Q ss_pred CCCCcChHHHHHhhcCCCCC------cccccccceeEEEEEECCCCeEEEEEEeecc----CchhHHHHHHHHHHHhcCC
Q 046598 674 SFPNISYQNLYNATDRFSSV------NQIGEGSFGSVFKGILDDGRTTIAVKVFNLL----HHGAFKSFIAECNTLKNIR 743 (986)
Q Consensus 674 ~~~~~~~~~~~~~~~~y~~~------~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~ 743 (986)
....+++.++..++++|... +.||+|+||.||+|.+. ++.||||++... .....+.+.+|++++++++
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 88 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESS--SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEEC--CceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence 45678999999999998877 89999999999999874 689999998642 2334578999999999999
Q ss_pred CCcceeeeeeccccccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 046598 744 HRNLVKILTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPP 823 (986)
Q Consensus 744 h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ 823 (986)
||||+++++++ ..++..++||||+++++|.+++.... ....+++..++.++.||+.||+|||+. +
T Consensus 89 h~~i~~~~~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ 153 (307)
T 2nru_A 89 HENLVELLGFS-----SDGDDLCLVYVYMPNGSLLDRLSCLD-------GTPPLSWHMRCKIAQGAANGINFLHEN---H 153 (307)
T ss_dssp CTTBCCEEEEE-----CSSSSCEEEEECCTTCBHHHHHHTGG-------GCCCCCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred CCCeEEEEEEE-----ecCCceEEEEEecCCCcHHHHHHhcc-------CCCCCCHHHHHHHHHHHHHHHHHHhcC---C
Confidence 99999999994 45578899999999999999996321 234689999999999999999999999 9
Q ss_pred eEeecCCCCCeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCC
Q 046598 824 IAHCDLKPSNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKK 903 (986)
Q Consensus 824 ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~ 903 (986)
|+||||||+||+++.++.+||+|||+++...............|++.|+|||++.+ .++.++||||||+++|+|++|+.
T Consensus 154 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~ 232 (307)
T 2nru_A 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLP 232 (307)
T ss_dssp EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCC
T ss_pred eecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCC
Confidence 99999999999999999999999999987654433333444678999999998765 58999999999999999999999
Q ss_pred CCCccccccccHHHHHHh--hCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCC
Q 046598 904 PTDIMFEGDMNLHNLART--ALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRM 981 (986)
Q Consensus 904 pf~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 981 (986)
||........ ...+... .....+.+.+++.+... ....+..+.+++.+||+.||++||
T Consensus 233 p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~l~~li~~cl~~~p~~Rp 292 (307)
T 2nru_A 233 AVDEHREPQL-LLDIKEEIEDEEKTIEDYIDKKMNDA-------------------DSTSVEAMYSVASQCLHEKKNKRP 292 (307)
T ss_dssp SBCTTBSSSB-TTHHHHHHHTTSCCHHHHSCSSCSCC-------------------CHHHHHHHHHHHHHHTCSSTTTSC
T ss_pred CcccCcchHH-HHHHHHHhhhhhhhhhhhcccccccc-------------------chHHHHHHHHHHHHHcCCCcccCc
Confidence 9975433221 1111111 11112333333322111 124566788999999999999999
Q ss_pred CCCCC
Q 046598 982 SMTNV 986 (986)
Q Consensus 982 t~~eV 986 (986)
|++||
T Consensus 293 s~~~l 297 (307)
T 2nru_A 293 DIKKV 297 (307)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 98764
No 60
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-40 Score=362.77 Aligned_cols=250 Identities=21% Similarity=0.291 Sum_probs=202.3
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
.++|++.+.||+|+||.||+|.+..+++.||+|+++... .....+.+|+++++.++||||+++++++ .+.+..+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~~~ 77 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESF-----ESMEELV 77 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEE-----EETTEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEE-----ecCCEEE
Confidence 578999999999999999999999999999999987543 3456788999999999999999999994 4567899
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecC--CCcEEE
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDE--DMIAHI 844 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kL 844 (986)
+||||+++|+|.+++.. ....+++.++..++.||+.||+|||+. ||+||||||+||+++. ++.+||
T Consensus 78 lv~e~~~g~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl 145 (321)
T 1tki_A 78 MIFEFISGLDIFERINT---------SAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKI 145 (321)
T ss_dssp EEECCCCCCBHHHHHTS---------SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEE
T ss_pred EEEEeCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEE
Confidence 99999999999999952 234689999999999999999999999 9999999999999987 789999
Q ss_pred cccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCC
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALP 924 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 924 (986)
+|||+++...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... ....
T Consensus 146 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~---- 213 (321)
T 1tki_A 146 IEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-----QIIE---- 213 (321)
T ss_dssp CCCTTCEECCTTC---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH----
T ss_pred EECCCCeECCCCC---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-----HHHH----
Confidence 9999998765332 223456899999999999988999999999999999999999999632211 1110
Q ss_pred CchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 925 DHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 925 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+....... + .......+.++.+++.+|++.||++|||++|+
T Consensus 214 ----~i~~~~~~~-~---------------~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~ 255 (321)
T 1tki_A 214 ----NIMNAEYTF-D---------------EEAFKEISIEAMDFVDRLLVKERKSRMTASEA 255 (321)
T ss_dssp ----HHHHTCCCC-C---------------HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred ----HHHcCCCCC-C---------------hhhhccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 011100000 0 00111234567899999999999999998763
No 61
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.6e-39 Score=375.27 Aligned_cols=358 Identities=19% Similarity=0.203 Sum_probs=236.9
Q ss_pred cCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCC
Q 046598 80 PHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSK 159 (986)
Q Consensus 80 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 159 (986)
..++++++|++|+|++|.+++. | .|+.+++|++|+|++|++++. | ++.+++|++|+|++|.+++. | ++++++
T Consensus 36 ~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~ 107 (457)
T 3bz5_A 36 ISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTK 107 (457)
T ss_dssp EEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTT
T ss_pred cChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCc
Confidence 3444555555555555555542 3 455555555555555555542 2 55555555555555555532 2 555555
Q ss_pred CCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceeecccccccccCCccccCCCCccEEeccc
Q 046598 160 IEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGV 239 (986)
Q Consensus 160 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~ 239 (986)
|++|++++|++++. | ++++++|++|++++|++++. + ++.+++|++|++++|+.
T Consensus 108 L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~--------------------- 160 (457)
T 3bz5_A 108 LTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKK--------------------- 160 (457)
T ss_dssp CCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSC---------------------
T ss_pred CCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCc---------------------
Confidence 55555555555532 2 45555555555555555532 1 44455555555555533
Q ss_pred cccccccCCcccccccccceEEecCceecccCCccccCCCCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCC
Q 046598 240 NKIQGAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGD 319 (986)
Q Consensus 240 N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~ 319 (986)
.+.++ +..+++|++|++++|++++ +| ++.+++|+.|++++|++++.+
T Consensus 161 ---~~~~~---~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~~------------------------ 207 (457)
T 3bz5_A 161 ---ITKLD---VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKLD------------------------ 207 (457)
T ss_dssp ---CCCCC---CTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCCC------------------------
T ss_pred ---ccccc---cccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCeec------------------------
Confidence 33332 2245666777777777765 33 667777777777777766421
Q ss_pred CCcccccccccccccceeeccccccccCCCcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCC
Q 046598 320 RDLNFLCSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPP 399 (986)
Q Consensus 320 ~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 399 (986)
+.. .++|+.|++++|++++ +| +..+++|+.|++++|++++..
T Consensus 208 --------------------------------l~~-l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~-- 249 (457)
T 3bz5_A 208 --------------------------------LNQ-NIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD-- 249 (457)
T ss_dssp --------------------------------CTT-CTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC--
T ss_pred --------------------------------ccc-CCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC--
Confidence 001 1456777888888876 44 778888999999999998653
Q ss_pred cccCCCCCCEEEccCccceeecCcccccccccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcc
Q 046598 400 AIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSL 479 (986)
Q Consensus 400 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L 479 (986)
+..+++|+.|++++|++ +.|++++|.+.+.+| ++.+++|+.|++++|++.+.+|.. ..+|
T Consensus 250 -~~~l~~L~~L~l~~n~L-------------~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~----~~~L 309 (457)
T 3bz5_A 250 -VSTLSKLTTLHCIQTDL-------------LEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQ----AAGI 309 (457)
T ss_dssp -CTTCTTCCEEECTTCCC-------------SCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECT----TCCC
T ss_pred -HHHCCCCCEEeccCCCC-------------CEEECCCCccCCccc--ccccccCCEEECCCCcccceeccC----CCcc
Confidence 45678888888888754 477888998887777 567899999999999988777642 3456
Q ss_pred eEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCc
Q 046598 480 IVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQN 559 (986)
Q Consensus 480 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 559 (986)
+.|++++| ++|++|+|++|+|++. + ++.+++|+.|++++|+|++ ++.|..|++++|
T Consensus 310 ~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n 365 (457)
T 3bz5_A 310 TELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNN 365 (457)
T ss_dssp SCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGT
T ss_pred eEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCC
Confidence 65555554 6889999999999974 3 8899999999999999986 246677789999
Q ss_pred cCcccCchhhhcccccceeeccCCccccccCCc
Q 046598 560 NLSGKIPELLIRLQLVKNLNLSNNDLEGVVPTQ 592 (986)
Q Consensus 560 ~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~ 592 (986)
+++|. ..+..|..+++++|+++|.+|..
T Consensus 366 ~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 366 NFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp SEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred cEEec-----ceeeecCccccccCcEEEEcChh
Confidence 99886 36677888999999999999875
No 62
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4e-40 Score=364.62 Aligned_cols=200 Identities=24% Similarity=0.324 Sum_probs=177.1
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc---CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
.++|++.+.||+|+||.||+|++..+++.||+|+++.. .....+.+.+|+++++.++||||++++++ +...+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~-----~~~~~ 78 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYA-----FQTHD 78 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEE-----EECSS
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEE-----EEeCC
Confidence 46799999999999999999999999999999999753 23345678999999999999999999998 45668
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..|+||||+++|+|.+++.. .+.+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 79 ~~~lv~E~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vk 145 (337)
T 1o6l_A 79 RLCFVMEYANGGELFFHLSR----------ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIK 145 (337)
T ss_dssp EEEEEEECCTTCBHHHHHHH----------HSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEE
T ss_pred EEEEEEeCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEE
Confidence 89999999999999999852 24689999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCC
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTD 906 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~ 906 (986)
|+|||+++...... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 146 L~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~ 206 (337)
T 1o6l_A 146 ITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206 (337)
T ss_dssp ECCCTTCBCSCCTT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred EeeccchhhcccCC--CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCC
Confidence 99999998543222 22334679999999999999999999999999999999999999996
No 63
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=4.8e-40 Score=370.07 Aligned_cols=260 Identities=22% Similarity=0.369 Sum_probs=203.4
Q ss_pred hcCCCCCcccccccceeEEEEEEC-------CCCeEEEEEEeeccC-chhHHHHHHHHHHHhcC-CCCcceeeeeecccc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILD-------DGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNI-RHRNLVKILTACSGV 757 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 757 (986)
.++|++.+.||+|+||.||+|++. .++..||||+++... ....+++.+|+++++++ +||||++++++|
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~--- 156 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--- 156 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE---
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE---
Confidence 468999999999999999999974 245689999997543 33457899999999999 899999999994
Q ss_pred ccCCCceEEEEEEeccCCCHhHhhccCCCCCc------cccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCC
Q 046598 758 DYQGNDFKALVFEFMHNRSLEEWLHPITREDE------TDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKP 831 (986)
Q Consensus 758 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 831 (986)
..++..|+||||+++|+|.+++........ .......+++.+++.++.||+.||+|||++ +|+||||||
T Consensus 157 --~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp 231 (370)
T 2psq_A 157 --TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 231 (370)
T ss_dssp --CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred --ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccch
Confidence 455779999999999999999975432100 011234689999999999999999999999 999999999
Q ss_pred CCeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCcccc
Q 046598 832 SNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFE 910 (986)
Q Consensus 832 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~ 910 (986)
+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~ 311 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 311 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred hhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 999999999999999999987654443333444567889999999999999999999999999999999 9999864221
Q ss_pred ccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 911 GDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. ..... +....... .+..++.++.+++.+||+.||++|||++||
T Consensus 312 ~--~~~~~------------~~~~~~~~------------------~~~~~~~~l~~li~~~l~~dP~~Rpt~~el 355 (370)
T 2psq_A 312 E--ELFKL------------LKEGHRMD------------------KPANCTNELYMMMRDCWHAVPSQRPTFKQL 355 (370)
T ss_dssp G--GHHHH------------HHTTCCCC------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred H--HHHHH------------HhcCCCCC------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 1 11111 11000000 001234567899999999999999998764
No 64
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1e-39 Score=360.01 Aligned_cols=207 Identities=29% Similarity=0.472 Sum_probs=162.6
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
.++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|++++++++||||++++++ +..++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~-----~~~~~~~ 78 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDV-----IHTENKL 78 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEE-----ECCTTEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEE-----EEECCeE
Confidence 468999999999999999999999889999999997543 2334678899999999999999999999 4556789
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEc
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIG 845 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 845 (986)
++||||++ |+|.+++...... .....+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 79 ~lv~e~~~-~~L~~~l~~~~~~----~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 150 (317)
T 2pmi_A 79 TLVFEFMD-NDLKKYMDSRTVG----NTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLG 150 (317)
T ss_dssp EEEEECCC-CBHHHHHHHHHSS----SCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred EEEEEecC-CCHHHHHHhcccc----ccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEEC
Confidence 99999997 6999998633211 2234589999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCccccccccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCcc
Q 046598 846 DFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG-SEVSISGDVYSYGILLLELITRKKPTDIM 908 (986)
Q Consensus 846 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvvl~elltg~~pf~~~ 908 (986)
|||+++...... .......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 151 Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 212 (317)
T 2pmi_A 151 DFGLARAFGIPV--NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT 212 (317)
T ss_dssp CCSSCEETTSCC--CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cCccceecCCCc--ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999998764322 12234568999999999876 46899999999999999999999999743
No 65
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=8.4e-40 Score=363.02 Aligned_cols=249 Identities=24% Similarity=0.321 Sum_probs=200.4
Q ss_pred HhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---chhHHHHHHHHHHHhcC-CCCcceeeeeeccccccC
Q 046598 685 NATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQ 760 (986)
Q Consensus 685 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 760 (986)
...++|.+.+.||+|+||.||+|+++.+++.||||+++... ....+.+..|.++++.+ +||||++++++ +.
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~-----~~ 88 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCT-----FQ 88 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEE-----EE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEE-----EE
Confidence 35678999999999999999999999999999999997532 23456788899999877 99999999998 45
Q ss_pred CCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCC
Q 046598 761 GNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDM 840 (986)
Q Consensus 761 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 840 (986)
+.+..|+||||+++|+|.+++.. .+.+++.+++.++.||+.||+|||++ ||+||||||+||+++.++
T Consensus 89 ~~~~~~lv~E~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g 155 (345)
T 1xjd_A 89 TKENLFFVMEYLNGGDLMYHIQS----------CHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDG 155 (345)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTS
T ss_pred eCCEEEEEEeCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCC
Confidence 66889999999999999999952 24589999999999999999999999 999999999999999999
Q ss_pred cEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHH
Q 046598 841 IAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 841 ~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~ 920 (986)
.+||+|||+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||..... .....
T Consensus 156 ~vkL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~ 228 (345)
T 1xjd_A 156 HIKIADFGMCKENMLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-----EELFH 228 (345)
T ss_dssp CEEECCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH
T ss_pred CEEEeEChhhhhcccCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH-----HHHHH
Confidence 99999999998643222 223456799999999999999999999999999999999999999963211 11111
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCC-CC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMT-NV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~-eV 986 (986)
......+.- +...+.++.+++.+||+.||++||++. ||
T Consensus 229 ------------~i~~~~~~~----------------p~~~s~~~~~li~~lL~~dp~~R~~~~~~i 267 (345)
T 1xjd_A 229 ------------SIRMDNPFY----------------PRWLEKEAKDLLVKLFVREPEKRLGVRGDI 267 (345)
T ss_dssp ------------HHHHCCCCC----------------CTTSCHHHHHHHHHHSCSSGGGSBTTBSCG
T ss_pred ------------HHHhCCCCC----------------CcccCHHHHHHHHHHhcCCHhHcCCChHHH
Confidence 000000000 001234577899999999999999987 53
No 66
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.2e-39 Score=357.20 Aligned_cols=260 Identities=24% Similarity=0.367 Sum_probs=198.0
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhc--CCCCcceeeeeeccccccCCCc
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKN--IRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~~~~~~ 763 (986)
..++|++.+.||+|+||+||+|++. ++.||||++... ..+.+.+|.+++.. ++||||+++++++... .....
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~-~~~~~ 79 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSWQ--GENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTS-RHSST 79 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEE-ETTEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEEC--CEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccc-cCCCc
Confidence 3578999999999999999999984 689999998653 33555666666665 7999999999986543 34456
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEeecCCCCCeE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLH--------HDCQPPIAHCDLKPSNIL 835 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~~ivH~Dlkp~NIl 835 (986)
..++||||+++|+|.++++. ..+++.+++.++.||+.||+||| +. +|+||||||+||+
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil 145 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQL-----------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNIL 145 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTT-----------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEE
T ss_pred eeEEehhhccCCCHHHHHhh-----------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEE
Confidence 78999999999999999951 35899999999999999999999 77 9999999999999
Q ss_pred ecCCCcEEEcccccceecCCCCCcc--ccccccccccccccccccCC------CcCcccchhhHHHHHHHHHhC------
Q 046598 836 LDEDMIAHIGDFGLARFLPLSSAQT--SSIGAKGSIGYIAPEYGLGS------EVSISGDVYSYGILLLELITR------ 901 (986)
Q Consensus 836 l~~~~~~kL~DFG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwSlGvvl~elltg------ 901 (986)
++.++.+||+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||+||
T Consensus 146 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~ 225 (301)
T 3q4u_A 146 VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 225 (301)
T ss_dssp ECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred EcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccc
Confidence 9999999999999998664332221 12334799999999998876 566899999999999999999
Q ss_pred ----CCCCCccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCC
Q 046598 902 ----KKPTDIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESP 977 (986)
Q Consensus 902 ----~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP 977 (986)
+.||....................... ...+ .......++.++.+++.+||+.||
T Consensus 226 ~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--------------~~~~~~~~~~~l~~li~~cl~~dP 284 (301)
T 3q4u_A 226 VEDYKPPFYDVVPNDPSFEDMRKVVCVDQQR-------PNIP--------------NRWFSDPTLTSLAKLMKECWYQNP 284 (301)
T ss_dssp CCCCCCTTTTTSCSSCCHHHHHHHHTTSCCC-------CCCC--------------GGGGGSHHHHHHHHHHHHHCCSSG
T ss_pred cccccccccccCCCCcchhhhhHHHhccCCC-------CCCC--------------hhhccCccHHHHHHHHHHHhhcCh
Confidence 777764443333332222211111000 0000 000112456778999999999999
Q ss_pred CCCCCCCCC
Q 046598 978 EDRMSMTNV 986 (986)
Q Consensus 978 ~~RPt~~eV 986 (986)
++||||+||
T Consensus 285 ~~Rps~~~i 293 (301)
T 3q4u_A 285 SARLTALRI 293 (301)
T ss_dssp GGSCCHHHH
T ss_pred hhCCCHHHH
Confidence 999999764
No 67
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=5.6e-40 Score=360.03 Aligned_cols=252 Identities=29% Similarity=0.467 Sum_probs=192.4
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.++|.+.++||+|+||.||+|.+.. .+|+|+++.. .....+.+.+|++++++++||||+++++++. .+.
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------~~~ 105 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------KDN 105 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSS
T ss_pred ccceEEEeEecCCCCeEEEEEEECC---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc------cCc
Confidence 4689999999999999999998764 5899988753 2344578999999999999999999999842 345
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHI 844 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 844 (986)
.++||||+++++|.+++. .....+++.+++.|+.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 106 ~~lv~e~~~~~~L~~~l~---------~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl 173 (307)
T 3lb7_A 106 LAIVTQWCEGSSLYKHLH---------VQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKI 173 (307)
T ss_dssp CEEEEECCSSCBHHHHHH---------TSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHH---------hcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEE
Confidence 799999999999999996 2335689999999999999999999999 9999999999999999999999
Q ss_pred cccccceecCCCCCcccccccccccccccccccc---CCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHh
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGL---GSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLART 921 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 921 (986)
+|||+++...............||+.|+|||++. +..++.++|||||||++|||++|+.||......+.........
T Consensus 174 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~ 253 (307)
T 3lb7_A 174 GDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG 253 (307)
T ss_dssp CCCCSSCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHT
T ss_pred ccCCCceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcC
Confidence 9999998654333333344567999999999986 5678999999999999999999999997432211111111111
Q ss_pred hCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 922 ALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 922 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
........ ....++.++.+++.+||+.+|++|||+.||
T Consensus 254 ~~~~~~~~---------------------------~~~~~~~~l~~li~~~l~~~p~~RPs~~~i 291 (307)
T 3lb7_A 254 YASPDLSK---------------------------LYKNCPKAMKRLVADCVKKVKEERPLFPQI 291 (307)
T ss_dssp CCCCCSTT---------------------------SCSSSCHHHHHHHHHHSCSSSTTSCCHHHH
T ss_pred CCCcchhh---------------------------hhcCCcHHHHHHHHHHhhCChhhCcCHHHH
Confidence 00000000 001234567899999999999999998764
No 68
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=359.46 Aligned_cols=250 Identities=22% Similarity=0.268 Sum_probs=200.8
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCch------hHHHHHHHHHHHhcCCCCcceeeeeeccccccC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHG------AFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ 760 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 760 (986)
.++|.+.+.||+|+||.||+|.+..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++ .
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~ 84 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY-----E 84 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----E
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEE-----E
Confidence 45799999999999999999999999999999999753321 357789999999999999999999994 5
Q ss_pred CCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCC
Q 046598 761 GNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDM 840 (986)
Q Consensus 761 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 840 (986)
.+...++||||+++++|.+++.. ...+++.+++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 85 ~~~~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~ 151 (326)
T 2y0a_A 85 NKTDVILILELVAGGELFDFLAE----------KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRN 151 (326)
T ss_dssp CSSEEEEEEECCCSCBHHHHHTT----------SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSS
T ss_pred eCCEEEEEEEcCCCCCHHHHHHh----------cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCC
Confidence 56789999999999999999952 34689999999999999999999999 999999999999999887
Q ss_pred ----cEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHH
Q 046598 841 ----IAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLH 916 (986)
Q Consensus 841 ----~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~ 916 (986)
.+||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||......+ ...
T Consensus 152 ~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~ 227 (326)
T 2y0a_A 152 VPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLA 227 (326)
T ss_dssp SSSCCEEECCCTTCEECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHH
T ss_pred CCCCCEEEEECCCCeECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHH
Confidence 899999999987643322 234569999999999999999999999999999999999999996321110 000
Q ss_pred HHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 917 NLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 917 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
...... .. .. .......+..+.+++.+||+.||++|||++|+
T Consensus 228 ~~~~~~-~~-------------~~--------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~ 269 (326)
T 2y0a_A 228 NVSAVN-YE-------------FE--------------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDS 269 (326)
T ss_dssp HHHHTC-CC-------------CC--------------HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHhcC-CC-------------cC--------------ccccccCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 000000 00 00 00011234557799999999999999998763
No 69
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.7e-40 Score=375.15 Aligned_cols=251 Identities=25% Similarity=0.337 Sum_probs=199.8
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
.++|.+.+.||+|+||.||+|.+..+++.||||+++... ....+++.+|++++++++||||++++++| ..++..
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~~ 187 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC-----TQKQPI 187 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEE-----CSSSSC
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-----ecCCCc
Confidence 467899999999999999999999889999999987532 23345788999999999999999999995 445778
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEc
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIG 845 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 845 (986)
++||||+++|+|.++++. ....+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 188 ~lv~e~~~~g~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~ 255 (377)
T 3cbl_A 188 YIVMELVQGGDFLTFLRT---------EGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKIS 255 (377)
T ss_dssp EEEEECCTTCBHHHHHHH---------HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEcCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEEC
Confidence 999999999999999962 234589999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCC
Q 046598 846 DFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLARTALP 924 (986)
Q Consensus 846 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 924 (986)
|||+++...............++..|+|||++.+..++.++|||||||++|||+| |+.||...... .
T Consensus 256 DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-----~------- 323 (377)
T 3cbl_A 256 DFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-----Q------- 323 (377)
T ss_dssp CGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-----H-------
T ss_pred cCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----H-------
Confidence 9999986533221111122345778999999998899999999999999999999 99998642211 1
Q ss_pred CchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 925 DHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 925 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..+.+...... +.+..++.++.+++.+||+.||++|||++||
T Consensus 324 --~~~~~~~~~~~------------------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i 365 (377)
T 3cbl_A 324 --TREFVEKGGRL------------------PCPELCPDAVFRLMEQCWAYEPGQRPSFSTI 365 (377)
T ss_dssp --HHHHHHTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred --HHHHHHcCCCC------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 11111110000 0011234567899999999999999998764
No 70
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=8.3e-40 Score=356.59 Aligned_cols=249 Identities=23% Similarity=0.393 Sum_probs=194.1
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc---CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
.++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|+.++++++||||++++++ +..++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~-----~~~~~ 84 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDV-----DEEDD 84 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEE-----EECSS
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEe-----eeeCC
Confidence 46899999999999999999999998999999998542 23345678999999999999999999999 45668
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..++||||+++++|.+++.. .+.+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 85 ~~~lv~e~~~g~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~k 151 (294)
T 4eqm_A 85 CYYLVMEYIEGPTLSEYIES----------HGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLK 151 (294)
T ss_dssp EEEEEEECCCSCBHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEE
T ss_pred eEEEEEeCCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEE
Confidence 89999999999999999952 24689999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhC
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTAL 923 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 923 (986)
|+|||+++...... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .......
T Consensus 152 l~Dfg~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-----~~~~~~~ 225 (294)
T 4eqm_A 152 IFDFGIAKALSETS-LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV-----SIAIKHI 225 (294)
T ss_dssp ECCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH-----HHHHHHH
T ss_pred EEeCCCcccccccc-ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHh
Confidence 99999997653222 12233456899999999999999999999999999999999999999632211 1111000
Q ss_pred CCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 046598 924 PDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMS 982 (986)
Q Consensus 924 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt 982 (986)
....... ........+..+.+++.+|++.||++||+
T Consensus 226 ~~~~~~~-----------------------~~~~~~~~~~~l~~li~~~l~~dp~~R~~ 261 (294)
T 4eqm_A 226 QDSVPNV-----------------------TTDVRKDIPQSLSNVILRATEKDKANRYK 261 (294)
T ss_dssp SSCCCCH-----------------------HHHSCTTSCHHHHHHHHHHSCSSGGGSCS
T ss_pred hccCCCc-----------------------chhcccCCCHHHHHHHHHHhcCCHhHccc
Confidence 0000000 00001123456789999999999999994
No 71
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=4.3e-40 Score=364.07 Aligned_cols=251 Identities=22% Similarity=0.386 Sum_probs=197.3
Q ss_pred hcCCCCCcccccccceeEEEEEECCC---CeEEEEEEeecc-CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDG---RTTIAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
.++|++.+.||+|+||.||+|.+..+ +..||||+++.. .....+.+.+|++++++++||||+++++++ ..+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~ 122 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV-----TRG 122 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CGG
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeC
Confidence 45788999999999999999999744 456999999754 334457799999999999999999999995 445
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
...++||||+++|+|.++++. ....+++.+++.|+.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~ 190 (325)
T 3kul_A 123 RLAMIVTEYMENGSLDTFLRT---------HDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVC 190 (325)
T ss_dssp GCCEEEEECCTTCBHHHHHHT---------TTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred CccEEEeeCCCCCcHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCE
Confidence 778999999999999999952 234689999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCC-ccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHH
Q 046598 843 HIGDFGLARFLPLSSA-QTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~ 920 (986)
||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 191 kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~~ 265 (325)
T 3kul_A 191 KVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-----DVIS 265 (325)
T ss_dssp EECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-----HHHH
T ss_pred EECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-----HHHH
Confidence 9999999987654322 122233456788999999998999999999999999999999 99998632211 1111
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+....... ....++.++.+++.+||+.||++|||++||
T Consensus 266 ---------~~~~~~~~~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ei 304 (325)
T 3kul_A 266 ---------SVEEGYRLP------------------APMGCPHALHQLMLDCWHKDRAQRPRFSQI 304 (325)
T ss_dssp ---------HHHTTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ---------HHHcCCCCC------------------CCCCcCHHHHHHHHHHccCChhhCcCHHHH
Confidence 000000000 001234567899999999999999998764
No 72
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.4e-40 Score=367.67 Aligned_cols=245 Identities=23% Similarity=0.301 Sum_probs=194.6
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc---CchhHHHHHHHHHHHhcC-CCCcceeeeeeccccccCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL---HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQG 761 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 761 (986)
..++|++.+.||+|+||.||+|++..+++.||||+++.. .....+.+.+|.++++.+ +||||++++++ +..
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~-----~~~ 95 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCC-----FQT 95 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEE-----EEC
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEE-----EEe
Confidence 357899999999999999999999999999999999743 233456788999999988 79999999999 556
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI 841 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 841 (986)
.+..|+||||+++|+|.++++. .+.+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.
T Consensus 96 ~~~~~lv~E~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ 162 (353)
T 3txo_A 96 PDRLFFVMEFVNGGDLMFHIQK----------SRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGH 162 (353)
T ss_dssp SSEEEEEEECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSC
T ss_pred CCEEEEEEeCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCC
Confidence 6889999999999999999952 24689999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHh
Q 046598 842 AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLART 921 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 921 (986)
+||+|||+|+..... .......+||+.|+|||++.+..++.++||||+||++|||++|+.||..... .....
T Consensus 163 ikL~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~~- 234 (353)
T 3txo_A 163 CKLADFGMCKEGICN--GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE-----DDLFE- 234 (353)
T ss_dssp EEECCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH-
T ss_pred EEEccccceeecccC--CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH-----HHHHH-
Confidence 999999999854322 2233446799999999999988999999999999999999999999963211 11111
Q ss_pred hCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCC
Q 046598 922 ALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSM 983 (986)
Q Consensus 922 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 983 (986)
.+...... .+ .....++.+++.+|++.||++||++
T Consensus 235 -------~i~~~~~~-~p-------------------~~~~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 235 -------AILNDEVV-YP-------------------TWLHEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp -------HHHHCCCC-CC-------------------TTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred -------HHHcCCCC-CC-------------------CCCCHHHHHHHHHHhhhCHHHccCC
Confidence 11110000 00 0123456789999999999999998
No 73
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-39 Score=366.33 Aligned_cols=251 Identities=19% Similarity=0.253 Sum_probs=202.6
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
.++|++.+.||+|+||.||+|.+..+++.||+|++..........+.+|++++++++||||++++++ +.++...+
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~-----~~~~~~~~ 124 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA-----FEDKYEMV 124 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEE-----EECSSEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEE-----EEeCCEEE
Confidence 4689999999999999999999999999999999986655566789999999999999999999999 45568899
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecC--CCcEEE
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDE--DMIAHI 844 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kL 844 (986)
+||||+++|+|.+++.. ....+++.++..++.||+.||+|||+. +|+||||||+||+++. ++.+||
T Consensus 125 lv~E~~~gg~L~~~l~~---------~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL 192 (387)
T 1kob_A 125 LILEFLSGGELFDRIAA---------EDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKI 192 (387)
T ss_dssp EEEECCCCCBHHHHTTC---------TTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEE
T ss_pred EEEEcCCCCcHHHHHHh---------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEE
Confidence 99999999999999952 234689999999999999999999999 9999999999999974 468999
Q ss_pred cccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCC
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALP 924 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 924 (986)
+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .........
T Consensus 193 ~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~~--- 265 (387)
T 1kob_A 193 IDFGLATKLNPDEI---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-ETLQNVKRC--- 265 (387)
T ss_dssp CCCTTCEECCTTSC---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHHC---
T ss_pred EecccceecCCCcc---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-HHHHHHHhC---
Confidence 99999987643322 23346899999999999999999999999999999999999999632111 000011000
Q ss_pred CchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 925 DHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 925 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.....+. .....+.++.+++.+||+.||++|||++|+
T Consensus 266 ---------~~~~~~~----------------~~~~~s~~~~~li~~~L~~dP~~Rpt~~el 302 (387)
T 1kob_A 266 ---------DWEFDED----------------AFSSVSPEAKDFIKNLLQKEPRKRLTVHDA 302 (387)
T ss_dssp ---------CCCCCSS----------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred ---------CCCCCcc----------------ccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 0000000 000234457899999999999999998763
No 74
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=365.36 Aligned_cols=246 Identities=26% Similarity=0.366 Sum_probs=198.8
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc---CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
.++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+++++.++||||++++++ +.+..
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~-----~~~~~ 88 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYS-----FQDEE 88 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEE-----EECSS
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEE-----EEeCC
Confidence 46799999999999999999999999999999999642 23345778899999999999999999998 45668
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..|+||||+++|+|.+++.. ...+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+|
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~----------~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vk 155 (384)
T 4fr4_A 89 DMFMVVDLLLGGDLRYHLQQ----------NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVH 155 (384)
T ss_dssp EEEEEECCCTTEEHHHHHHT----------TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEE
T ss_pred EEEEEEecCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEE
Confidence 89999999999999999952 34689999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccC---CCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHH
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG---SEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~ 920 (986)
|+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .......
T Consensus 156 L~DFG~a~~~~~~---~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~--~~~~~~~ 230 (384)
T 4fr4_A 156 ITDFNIAAMLPRE---TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST--SSKEIVH 230 (384)
T ss_dssp ECCCTTCEECCTT---CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS--CHHHHHH
T ss_pred EeccceeeeccCC---CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc--cHHHHHH
Confidence 9999999876432 22344679999999999874 45899999999999999999999999633221 1111111
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSM 983 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 983 (986)
.+.......+ ...+.++.+++.+||+.||++||++
T Consensus 231 ---------~~~~~~~~~p-------------------~~~s~~~~~li~~lL~~dP~~R~s~ 265 (384)
T 4fr4_A 231 ---------TFETTVVTYP-------------------SAWSQEMVSLLKKLLEPNPDQRFSQ 265 (384)
T ss_dssp ---------HHHHCCCCCC-------------------TTSCHHHHHHHHHHSCSSGGGSCCS
T ss_pred ---------HHhhcccCCC-------------------CcCCHHHHHHHHHHhcCCHhHhccc
Confidence 0000000001 0123457899999999999999983
No 75
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.2e-39 Score=365.29 Aligned_cols=251 Identities=20% Similarity=0.278 Sum_probs=200.4
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC--chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
..++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|++++++++||||++++++ +.+++
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~-----~~~~~ 101 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS-----IQEES 101 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEE-----EECSS
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEE-----EEeCC
Confidence 4578999999999999999999999999999999997532 3345678999999999999999999999 45668
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCC---
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDM--- 840 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--- 840 (986)
..|+||||+++|+|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~ 168 (362)
T 2bdw_A 102 FHYLVFDLVTGGELFEDIVA----------REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGA 168 (362)
T ss_dssp EEEEEECCCCSCBHHHHHTT----------CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTC
T ss_pred EEEEEEecCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCC
Confidence 89999999999999999852 24689999999999999999999999 999999999999998654
Q ss_pred cEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHH
Q 046598 841 IAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 841 ~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~ 920 (986)
.+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .......
T Consensus 169 ~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--~~~~~i~ 243 (362)
T 2bdw_A 169 AVKLADFGLAIEVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIK 243 (362)
T ss_dssp CEEECCCTTCBCCTTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH
T ss_pred CEEEeecCcceEecCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHH
Confidence 59999999998764322 223457999999999999999999999999999999999999998632110 1111110
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.. ... .+.. .....+.++.+++.+||+.||++|||++|+
T Consensus 244 ~~-----------~~~-~~~~---------------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 282 (362)
T 2bdw_A 244 AG-----------AYD-YPSP---------------EWDTVTPEAKSLIDSMLTVNPKKRITADQA 282 (362)
T ss_dssp HT-----------CCC-CCTT---------------GGGGSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred hC-----------CCC-CCcc---------------cccCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 00 000 0000 001234457799999999999999998753
No 76
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=4.5e-40 Score=359.36 Aligned_cols=267 Identities=25% Similarity=0.407 Sum_probs=200.3
Q ss_pred hcCCCCCcccccccceeEEEEE----ECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGI----LDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
.++|++.+.||+|+||+||+|+ +..+++.||||+++.......+.+.+|++++++++||||++++++|.. .+.
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECH---HHH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CCC
Confidence 4689999999999999999999 456789999999987666667889999999999999999999998642 223
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
...++||||+++|+|.+++.. ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~ 153 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQK---------HKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRV 153 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHH---------CGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEE
T ss_pred CceEEEEEeCCCCCHHHHHHh---------cccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeE
Confidence 558999999999999999962 234589999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCc-cccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHh
Q 046598 843 HIGDFGLARFLPLSSAQ-TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLART 921 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 921 (986)
||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||+||..||...... .......
T Consensus 154 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~ 230 (295)
T 3ugc_A 154 KIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGN 230 (295)
T ss_dssp EECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCT
T ss_pred EEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcC
Confidence 99999999876433221 2223345778899999999999999999999999999999999998632111 1111111
Q ss_pred hCCCc--hhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 922 ALPDH--VMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 922 ~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..... .....+. +.... +.+.+..++.++.+++.+||+.||++|||++||
T Consensus 231 ~~~~~~~~~~~~~~-~~~~~--------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 282 (295)
T 3ugc_A 231 DKQGQMIVFHLIEL-LKNNG--------------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282 (295)
T ss_dssp TCCTHHHHHHHHHH-HHTTC--------------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred ccccchhHHHHHHH-HhccC--------------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 00000 0011111 00000 001112345678899999999999999998764
No 77
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.4e-39 Score=366.67 Aligned_cols=254 Identities=22% Similarity=0.279 Sum_probs=198.0
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc---CchhHHHHHHHHHHHhcC-CCCcceeeeeeccccccCCC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL---HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 762 (986)
.++|++.+.||+|+||+||+|+++.+++.||+|+++.. .....+.+.+|..++.++ +||||++++++ +..+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~-----~~~~ 125 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC-----FQTE 125 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEE-----EECS
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEE-----EEEC
Confidence 46799999999999999999999999999999999753 223345688899999887 89999999998 4566
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
...|+||||+++|+|..++.. .+.+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+
T Consensus 126 ~~~~lV~E~~~gg~L~~~l~~----------~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~i 192 (396)
T 4dc2_A 126 SRLFFVIEYVNGGDLMFHMQR----------QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHI 192 (396)
T ss_dssp SEEEEEEECCTTCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCE
T ss_pred CEEEEEEEcCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCE
Confidence 889999999999999999952 24689999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
||+|||+|+..... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+....
T Consensus 193 kL~DFGla~~~~~~--~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~------ 264 (396)
T 4dc2_A 193 KLTDYGMCKEGLRP--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ------ 264 (396)
T ss_dssp EECCCTTCBCCCCT--TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------------
T ss_pred EEeecceeeecccC--CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccch------
Confidence 99999999853222 2223456799999999999999999999999999999999999999964322111000
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMT 984 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 984 (986)
.....+.......... .+...+.++.+++.+||+.||++||++.
T Consensus 265 --~~~~~~~~~i~~~~~~----------------~p~~~s~~~~~li~~lL~~dP~~R~~~~ 308 (396)
T 4dc2_A 265 --NTEDYLFQVILEKQIR----------------IPRSLSVKAASVLKSFLNKDPKERLGCH 308 (396)
T ss_dssp --CCHHHHHHHHHHCCCC----------------CCTTSCHHHHHHHHHHTCSCTTTSTTCS
T ss_pred --hhHHHHHHHHhccccC----------------CCCcCCHHHHHHHHHHhcCCHhHcCCCC
Confidence 0000000101100000 0002234577999999999999999973
No 78
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=9e-40 Score=365.46 Aligned_cols=254 Identities=22% Similarity=0.273 Sum_probs=200.6
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC-----chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH-----HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 761 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 761 (986)
.++|++.+.||+|+||+||+|.+..+++.||||+++... ....+.+.+|+++++.++||||+++++++ ..
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~ 97 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETY-----SS 97 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEE-----EE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEE-----Ee
Confidence 467999999999999999999999999999999986421 12357789999999999999999999984 45
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI 841 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 841 (986)
++..|+||||+++++|.+++.... .....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 98 ~~~~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~ 168 (351)
T 3c0i_A 98 DGMLYMVFEFMDGADLCFEIVKRA------DAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKEN 168 (351)
T ss_dssp TTEEEEEEECCSSCBHHHHHHHHH------HTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSST
T ss_pred CCEEEEEEeCCCCCCHHHHHHHhc------ccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCC
Confidence 678999999999999998885221 1234589999999999999999999999 9999999999999987654
Q ss_pred ---EEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHH
Q 046598 842 ---AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNL 918 (986)
Q Consensus 842 ---~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~ 918 (986)
+||+|||+++...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||..... ..
T Consensus 169 ~~~vkl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~ 240 (351)
T 3c0i_A 169 SAPVKLGGFGVAIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE------RL 240 (351)
T ss_dssp TCCEEECCCTTCEECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH------HH
T ss_pred CCcEEEecCcceeEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH------HH
Confidence 9999999998765332 223345799999999999999999999999999999999999999963211 00
Q ss_pred HHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 919 ARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 919 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. ..+........ .......+.++.+++.+||+.||++|||+.|+
T Consensus 241 ~--------~~i~~~~~~~~----------------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~ 284 (351)
T 3c0i_A 241 F--------EGIIKGKYKMN----------------PRQWSHISESAKDLVRRMLMLDPAERITVYEA 284 (351)
T ss_dssp H--------HHHHHTCCCCC----------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred H--------HHHHcCCCCCC----------------ccccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 0 01111000000 00011234567899999999999999998763
No 79
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=372.76 Aligned_cols=253 Identities=17% Similarity=0.210 Sum_probs=200.4
Q ss_pred HhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC--chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 685 NATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 685 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
...++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||++++++ +.++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~-----~~~~ 82 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS-----ISEE 82 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEE-----EECS
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEE-----EEEC
Confidence 34678999999999999999999999999999999997533 2345678999999999999999999999 4566
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEec---CC
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLD---ED 839 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~ 839 (986)
+..++||||+++|+|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+||+++ .+
T Consensus 83 ~~~~lv~E~~~gg~L~~~i~~----------~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~ 149 (444)
T 3soa_A 83 GHHYLIFDLVTGGELFEDIVA----------REYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKG 149 (444)
T ss_dssp SEEEEEECCCBCCBHHHHHHH----------CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTT
T ss_pred CEEEEEEEeCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCC
Confidence 889999999999999999852 34689999999999999999999999 999999999999998 46
Q ss_pred CcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHH
Q 046598 840 MIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLA 919 (986)
Q Consensus 840 ~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~ 919 (986)
+.+||+|||+++...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... ......
T Consensus 150 ~~vkL~DFG~a~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~--~~~~~i 225 (444)
T 3soa_A 150 AAVKLADFGLAIEVEGEQ--QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH--RLYQQI 225 (444)
T ss_dssp CCEEECCCSSCBCCCTTC--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHH
T ss_pred CcEEEccCceeEEecCCC--ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH--HHHHHH
Confidence 789999999998664322 2233467999999999999999999999999999999999999999632111 111111
Q ss_pred HhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 920 RTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 920 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
... .... +.. .....+.++.+++.+||+.||++|||++|+
T Consensus 226 ~~~-----------~~~~-~~~---------------~~~~~s~~~~~li~~~L~~dP~~Rpta~e~ 265 (444)
T 3soa_A 226 KAG-----------AYDF-PSP---------------EWDTVTPEAKDLINKMLTINPSKRITAAEA 265 (444)
T ss_dssp HHT-----------CCCC-CTT---------------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred HhC-----------CCCC-Ccc---------------ccccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 000 0000 000 001223457799999999999999998763
No 80
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.4e-39 Score=354.85 Aligned_cols=274 Identities=21% Similarity=0.286 Sum_probs=198.7
Q ss_pred cCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC--chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 688 DRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 688 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
++|++.+.||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++ .+++..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL-----HSDKKL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEE-----EeCCEE
Confidence 57999999999999999999999999999999997533 23347788999999999999999999994 456789
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEc
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIG 845 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 845 (986)
++||||+++ ++.+++. ...+.+++.+++.++.|++.||+|||++ ||+||||||+||+++.++.+||+
T Consensus 77 ~lv~e~~~~-~l~~~~~---------~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~ 143 (292)
T 3o0g_A 77 TLVFEFCDQ-DLKKYFD---------SCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLA 143 (292)
T ss_dssp EEEEECCSE-EHHHHHH---------HTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCC-CHHHHHH---------hCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEe
Confidence 999999965 6666654 2234689999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCccccccccccccccccccccCCC-cCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCC
Q 046598 846 DFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSE-VSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALP 924 (986)
Q Consensus 846 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 924 (986)
|||+++..... ........||+.|+|||++.+.. ++.++||||+||++|||++|..||...................
T Consensus 144 Dfg~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~ 221 (292)
T 3o0g_A 144 NFGLARAFGIP--VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 221 (292)
T ss_dssp CCTTCEECCSC--CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCC
T ss_pred ecccceecCCc--cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCC
Confidence 99999876422 22233456899999999988765 8999999999999999999888864222211122222111111
Q ss_pred Cc--hhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 925 DH--VMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 925 ~~--~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.. ........-...+... ................++.+++.+|++.||++|||++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 280 (292)
T 3o0g_A 222 PTEEQWPSMTKLPDYKPYPM-----YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280 (292)
T ss_dssp CCTTTCTTGGGSTTCCCCCC-----CCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred CChhhhhhhccccccccccc-----ccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHH
Confidence 00 0000000000000000 000000000111234567799999999999999998764
No 81
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.7e-40 Score=361.91 Aligned_cols=245 Identities=23% Similarity=0.325 Sum_probs=197.3
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
.++|.+.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+++++.++||||+++++++ ....
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-----~~~~ 82 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVI-----TTPT 82 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCC
Confidence 468999999999999999999999999999999986421 22346789999999999999999999994 4567
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..++||||+ +|+|.+++.. .+.+++.+++.++.||+.||+|||+. ||+||||||+||+++.++.+|
T Consensus 83 ~~~lv~E~~-~g~l~~~l~~----------~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~k 148 (336)
T 3h4j_B 83 DIVMVIEYA-GGELFDYIVE----------KKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVK 148 (336)
T ss_dssp EEEEEECCC-CEEHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEE
T ss_pred EEEEEEECC-CCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEE
Confidence 899999999 7899998842 24689999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEV-SISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
|+|||++...... ......+||+.|+|||++.+..+ ++++||||+||++|+|++|+.||+....... .. .
T Consensus 149 l~DFG~s~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-----~~-~ 219 (336)
T 3h4j_B 149 IADFGLSNIMTDG---NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-----FK-K 219 (336)
T ss_dssp ECCSSCTBTTTTS---BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-----BC-C
T ss_pred EEEeccceeccCC---cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-----HH-H
Confidence 9999999865432 22334579999999999988876 7899999999999999999999964221110 00 0
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+.......+ ...+.++.+++.+||+.||++|||++|+
T Consensus 220 --------i~~~~~~~p-------------------~~~s~~~~~li~~~L~~dP~~Rpt~~ei 256 (336)
T 3h4j_B 220 --------VNSCVYVMP-------------------DFLSPGAQSLIRRMIVADPMQRITIQEI 256 (336)
T ss_dssp --------CCSSCCCCC-------------------TTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred --------HHcCCCCCc-------------------ccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 000000000 0123456789999999999999998764
No 82
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=355.75 Aligned_cols=250 Identities=24% Similarity=0.320 Sum_probs=194.4
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc--------------------------hhHHHHHHHHHHHh
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH--------------------------GAFKSFIAECNTLK 740 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 740 (986)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999864321 12356889999999
Q ss_pred cCCCCcceeeeeeccccccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcC
Q 046598 741 NIRHRNLVKILTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDC 820 (986)
Q Consensus 741 ~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 820 (986)
+++||||+++++++.. ......++||||+++++|.+++. ...+++.+++.++.||+.||+|||++
T Consensus 92 ~l~h~~iv~~~~~~~~---~~~~~~~lv~e~~~~~~l~~~~~-----------~~~~~~~~~~~~~~qi~~~l~~lH~~- 156 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDD---PNEDHLYMVFELVNQGPVMEVPT-----------LKPLSEDQARFYFQDLIKGIEYLHYQ- 156 (298)
T ss_dssp TCCCTTBCCEEEEEEC---SSSSEEEEEEECCTTCBSCCSSC-----------SSCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred hCCCCCCCeEEEEEEc---CCCCEEEEEEecCCCCcHHHHhh-----------cCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 9999999999998642 23578999999999999988653 23689999999999999999999999
Q ss_pred CCCeEeecCCCCCeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccCCC---cCcccchhhHHHHHHH
Q 046598 821 QPPIAHCDLKPSNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSE---VSISGDVYSYGILLLE 897 (986)
Q Consensus 821 ~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwSlGvvl~e 897 (986)
+|+||||||+||+++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++|||||||++||
T Consensus 157 --~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~ 232 (298)
T 2zv2_A 157 --KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYC 232 (298)
T ss_dssp --TEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHH
T ss_pred --CeeccCCCHHHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHH
Confidence 999999999999999999999999999987643322 223457999999999988765 4788999999999999
Q ss_pred HHhCCCCCCccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCC
Q 046598 898 LITRKKPTDIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESP 977 (986)
Q Consensus 898 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP 977 (986)
|++|+.||.... ...... .+..... ..+. ....+.++.+++.+||+.||
T Consensus 233 l~~g~~pf~~~~-----~~~~~~--------~~~~~~~-~~~~-----------------~~~~~~~l~~li~~~l~~dp 281 (298)
T 2zv2_A 233 FVFGQCPFMDER-----IMCLHS--------KIKSQAL-EFPD-----------------QPDIAEDLKDLITRMLDKNP 281 (298)
T ss_dssp HHHSSCSSCCSS-----HHHHHH--------HHHHCCC-CCCS-----------------SSCCCHHHHHHHHHHTCSCT
T ss_pred HHHCCCCCCCcc-----HHHHHH--------HHhcccC-CCCC-----------------ccccCHHHHHHHHHHhhcCh
Confidence 999999996321 111110 0000000 0000 00223457899999999999
Q ss_pred CCCCCCCCC
Q 046598 978 EDRMSMTNV 986 (986)
Q Consensus 978 ~~RPt~~eV 986 (986)
++|||++||
T Consensus 282 ~~R~s~~e~ 290 (298)
T 2zv2_A 282 ESRIVVPEI 290 (298)
T ss_dssp TTSCCHHHH
T ss_pred hhCCCHHHH
Confidence 999998764
No 83
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.1e-39 Score=357.98 Aligned_cols=251 Identities=27% Similarity=0.386 Sum_probs=190.2
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC--chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
..++|++.+.||+|+||+||+|++. ++.||||++.... ....+++.+|++++++++||||+++++++ ....
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~ 107 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV-----TQPP 107 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSTT
T ss_pred ChhHceeeeEeecCCCeEEEEEEEC--CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECC
Confidence 4568999999999999999999884 6889999986533 33456789999999999999999999994 4557
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeecCCCCCeEecCCCc
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPP--IAHCDLKPSNILLDEDMI 841 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~ 841 (986)
..++||||+++|+|.+++.... ....+++.+++.++.||+.||+|||+. + |+||||||+||+++.++.
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~ 177 (309)
T 3p86_A 108 NLSIVTEYLSRGSLYRLLHKSG-------AREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYT 177 (309)
T ss_dssp CCEEEEECCTTCBHHHHHHSTT-------HHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCC
T ss_pred ceEEEEecCCCCcHHHHHhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCc
Confidence 7899999999999999996321 123489999999999999999999999 8 999999999999999999
Q ss_pred EEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHh
Q 046598 842 AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLART 921 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 921 (986)
+||+|||+++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....... .......
T Consensus 178 ~kL~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~~~~~~~ 253 (309)
T 3p86_A 178 VKVCDFGLSRLKAST--FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--VVAAVGF 253 (309)
T ss_dssp EEECCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHHHHH
T ss_pred EEECCCCCCcccccc--ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHh
Confidence 999999999754322 122334568999999999999999999999999999999999999996432110 0000000
Q ss_pred hCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 922 ALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 922 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.... .. .+...+.++.+++.+||+.||++|||++||
T Consensus 254 ~~~~-----------~~------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~~l 289 (309)
T 3p86_A 254 KCKR-----------LE------------------IPRNLNPQVAAIIEGCWTNEPWKRPSFATI 289 (309)
T ss_dssp SCCC-----------CC------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cCCC-----------CC------------------CCccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 0000 00 001233457899999999999999998764
No 84
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-39 Score=355.37 Aligned_cols=198 Identities=26% Similarity=0.350 Sum_probs=176.3
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.+++.++||||++++++ +.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~-----~~~~~ 79 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGT-----FQDAQ 79 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEE-----EECSS
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEE-----EEeCC
Confidence 467999999999999999999999999999999997532 2345678899999999999999999998 45668
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..|+||||+++|+|.+++.. ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 80 ~~~lv~e~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~k 146 (318)
T 1fot_A 80 QIFMIMDYIEGGELFSLLRK----------SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIK 146 (318)
T ss_dssp EEEEEECCCCSCBHHHHHHH----------TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEE
T ss_pred EEEEEEeCCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEE
Confidence 89999999999999999952 24589999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCc
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
|+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 147 L~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 205 (318)
T 1fot_A 147 ITDFGFAKYVPDV-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD 205 (318)
T ss_dssp ECCCSSCEECSSC-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred EeecCcceecCCc-----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 9999999875321 2345799999999999999999999999999999999999999963
No 85
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=6.4e-39 Score=354.47 Aligned_cols=249 Identities=21% Similarity=0.263 Sum_probs=178.3
Q ss_pred CcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCC-CCcceeeeeeccccccCCCceEEEEEEe
Q 046598 693 VNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGNDFKALVFEF 771 (986)
Q Consensus 693 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~lv~e~ 771 (986)
.+.||+|+||.||+|.+..+++.||||++... ....+.+|+.+++.+. ||||++++++ +.++...|+||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~-----~~~~~~~~lv~e~ 87 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEV-----FHDQLHTFLVMEL 87 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEE-----EECSSEEEEEECC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEE-----EEcCCEEEEEEEc
Confidence 47899999999999999999999999998643 3467789999999996 9999999999 4566889999999
Q ss_pred ccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCC---cEEEcccc
Q 046598 772 MHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDM---IAHIGDFG 848 (986)
Q Consensus 772 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kL~DFG 848 (986)
+++|+|.+++.. ...+++.++..|+.||+.||+|||++ +|+||||||+||+++.++ .+||+|||
T Consensus 88 ~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 154 (325)
T 3kn6_A 88 LNGGELFERIKK----------KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFG 154 (325)
T ss_dssp CCSCBHHHHHHH----------CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCT
T ss_pred cCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccc
Confidence 999999999952 34689999999999999999999999 999999999999998766 89999999
Q ss_pred cceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCchh
Q 046598 849 LARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALPDHVM 928 (986)
Q Consensus 849 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 928 (986)
+++...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||........ .....
T Consensus 155 ~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----------~~~~~ 222 (325)
T 3kn6_A 155 FARLKPPDN--QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT----------CTSAV 222 (325)
T ss_dssp TCEECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-----------------CCCHH
T ss_pred cceecCCCC--CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc----------cccHH
Confidence 998654322 223345689999999999999999999999999999999999999974322100 00111
Q ss_pred HHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 929 DIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 929 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+............ ........+.++.+++.+||+.||++|||++||
T Consensus 223 ~~~~~i~~~~~~~------------~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~el 268 (325)
T 3kn6_A 223 EIMKKIKKGDFSF------------EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGL 268 (325)
T ss_dssp HHHHHHTTTCCCC------------CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTS
T ss_pred HHHHHHHcCCCCC------------CcccccCCCHHHHHHHHHHCCCChhHCCCHHHH
Confidence 1111111111100 001112345567899999999999999999986
No 86
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=357.42 Aligned_cols=278 Identities=21% Similarity=0.257 Sum_probs=205.1
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
.++|.+.+.||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.. ......
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~~ 84 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTRHK 84 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTCCE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeec---CCCceE
Confidence 467999999999999999999999989999999997533 2345778899999999999999999998532 234578
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEe----cCCCc
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILL----DEDMI 841 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~ 841 (986)
++||||+++++|.+++.... ....+++.+++.++.||+.||+|||+. +|+||||||+||++ +.++.
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 154 (319)
T 4euu_A 85 VLIMEFCPCGSLYTVLEEPS-------NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSV 154 (319)
T ss_dssp EEEEECCTTCBHHHHHHSGG-------GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEE
T ss_pred EEEEeCCCCCCHHHHHHHhc-------cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCce
Confidence 99999999999999996322 123489999999999999999999999 99999999999999 78888
Q ss_pred EEEcccccceecCCCCCcccccccccccccccccccc--------CCCcCcccchhhHHHHHHHHHhCCCCCCccccccc
Q 046598 842 AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGL--------GSEVSISGDVYSYGILLLELITRKKPTDIMFEGDM 913 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~ 913 (986)
+||+|||+++....... .....||+.|+|||++. +..++.++|||||||++|||++|+.||........
T Consensus 155 ~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~ 231 (319)
T 4euu_A 155 YKLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR 231 (319)
T ss_dssp EEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG
T ss_pred EEEccCCCceecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch
Confidence 99999999987643322 23356899999999876 57899999999999999999999999964332221
Q ss_pred cHHHH--HHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 914 NLHNL--ARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 914 ~~~~~--~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..... .....+......+.... ..+.+ +.. ...............+.+++.+||+.||++|||++|+
T Consensus 232 ~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~--~~~---~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~el 300 (319)
T 4euu_A 232 NKEVMYKIITGKPSGAISGVQKAE-NGPID--WSG---DMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQF 300 (319)
T ss_dssp CHHHHHHHHHHCCTTCCEEEECST-TCCEE--EES---SCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHH
T ss_pred hHHHHHHHhcCCCcccchhhhccc-CCccc--cCc---cCCcccccchhHHHHhHHHHHHhccCChhhhccHHHh
Confidence 11111 11111111000000000 00000 000 0000011223556678899999999999999998763
No 87
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=5e-40 Score=361.71 Aligned_cols=257 Identities=22% Similarity=0.323 Sum_probs=193.7
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
..++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++... ....
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~ 88 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAE-TPAG 88 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEE-ETTE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeecc-CCCC
Confidence 3578999999999999999999999889999999997532 23346789999999999999999999986432 1222
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
...|+||||+++++|.++++. .+.+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 89 ~~~~lv~e~~~g~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~ 155 (311)
T 3ork_A 89 PLPYIVMEYVDGVTLRDIVHT----------EGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAV 155 (311)
T ss_dssp EEEEEEEECCCEEEHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCE
T ss_pred cccEEEEecCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCE
Confidence 356999999999999999952 24689999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCc-cccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHh
Q 046598 843 HIGDFGLARFLPLSSAQ-TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLART 921 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 921 (986)
||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....
T Consensus 156 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-----~~~~ 230 (311)
T 3ork_A 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-----VAYQ 230 (311)
T ss_dssp EECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHH
T ss_pred EEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-----HHHH
Confidence 99999999866433221 22334568999999999999999999999999999999999999996422111 1000
Q ss_pred hCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCC
Q 046598 922 ALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTN 985 (986)
Q Consensus 922 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~e 985 (986)
.....+.. ........+.++.+++.+||+.||++||++.+
T Consensus 231 ------------~~~~~~~~------------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~ 270 (311)
T 3ork_A 231 ------------HVREDPIP------------PSARHEGLSADLDAVVLKALAKNPENRYQTAA 270 (311)
T ss_dssp ------------HHHCCCCC------------HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHH
T ss_pred ------------HhcCCCCC------------cccccCCCCHHHHHHHHHHHhcCHhhChhhHH
Confidence 00000000 00001123456789999999999999998754
No 88
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.9e-39 Score=357.71 Aligned_cols=254 Identities=22% Similarity=0.282 Sum_probs=198.9
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc---CchhHHHHHHHHHHHhcC-CCCcceeeeeeccccccCCC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL---HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 762 (986)
.++|++.+.||+|+||.||+|++..+++.||+|+++.. .....+.+.+|..+++++ +||||++++++ +..+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~-----~~~~ 82 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC-----FQTE 82 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEE-----EECS
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEE-----EEeC
Confidence 36799999999999999999999999999999999753 233456688999999988 89999999999 4556
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
...|+||||+++|+|.+++.. .+.+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+
T Consensus 83 ~~~~lv~e~~~gg~L~~~l~~----------~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~ 149 (345)
T 3a8x_A 83 SRLFFVIEYVNGGDLMFHMQR----------QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHI 149 (345)
T ss_dssp SEEEEEECCCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCE
T ss_pred CEEEEEEeCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCE
Confidence 889999999999999999952 24589999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
||+|||+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||......+....
T Consensus 150 kL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~------ 221 (345)
T 3a8x_A 150 KLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ------ 221 (345)
T ss_dssp EECCGGGCBCSCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC------------
T ss_pred EEEeccccccccCCC--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccc------
Confidence 999999998543221 223446799999999999999999999999999999999999999964221110000
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMT 984 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 984 (986)
.....+.......... .+...+.++.+++.+||+.||++||++.
T Consensus 222 --~~~~~~~~~i~~~~~~----------------~p~~~s~~~~~li~~lL~~dP~~R~~~~ 265 (345)
T 3a8x_A 222 --NTEDYLFQVILEKQIR----------------IPRSLSVKAASVLKSFLNKDPKERLGCH 265 (345)
T ss_dssp ---CHHHHHHHHHHCCCC----------------CCTTSCHHHHHHHHHHTCSSTTTSTTCC
T ss_pred --ccHHHHHHHHHcCCCC----------------CCCCCCHHHHHHHHHHhcCCHhHCCCCC
Confidence 0000000000000000 0012234577899999999999999973
No 89
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.1e-39 Score=367.32 Aligned_cols=265 Identities=15% Similarity=0.215 Sum_probs=201.2
Q ss_pred hhcCCCCCcccccccceeEEEEEECCC-----CeEEEEEEeeccCchh-----------HHHHHHHHHHHhcCCCCccee
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDG-----RTTIAVKVFNLLHHGA-----------FKSFIAECNTLKNIRHRNLVK 749 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~ 749 (986)
..++|++.+.||+|+||.||+|.+..+ ++.||||++....... .....+|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 356899999999999999999999764 4789999987543211 123445666777889999999
Q ss_pred eeeeccccccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecC
Q 046598 750 ILTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDL 829 (986)
Q Consensus 750 l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dl 829 (986)
+++++... .......++||||+ +++|.+++.. ....+++.+++.|+.||+.||+|||+. +|+||||
T Consensus 113 ~~~~~~~~-~~~~~~~~lv~e~~-g~~L~~~~~~---------~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDl 178 (364)
T 3op5_A 113 YWGSGLHD-KNGKSYRFMIMDRF-GSDLQKIYEA---------NAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDI 178 (364)
T ss_dssp EEEEEEEE-ETTEEEEEEEEECE-EEEHHHHHHH---------TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred EEeeeeec-cCCcceEEEEEeCC-CCCHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecC
Confidence 99996542 23346689999999 9999999962 235699999999999999999999999 9999999
Q ss_pred CCCCeEec--CCCcEEEcccccceecCCCCCc-----cccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCC
Q 046598 830 KPSNILLD--EDMIAHIGDFGLARFLPLSSAQ-----TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRK 902 (986)
Q Consensus 830 kp~NIll~--~~~~~kL~DFG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~ 902 (986)
||+|||++ .++.+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||+||+
T Consensus 179 kp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~ 258 (364)
T 3op5_A 179 KASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGH 258 (364)
T ss_dssp CGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999999 8899999999999876432211 1123345999999999999999999999999999999999999
Q ss_pred CCCCccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 046598 903 KPTDIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMS 982 (986)
Q Consensus 903 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt 982 (986)
.||...... ..............+.+++++.+... .++.++.+++..||+.||++||+
T Consensus 259 ~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~li~~cl~~~p~~RP~ 316 (364)
T 3op5_A 259 LPWEDNLKD-PKYVRDSKIRYRENIASLMDKCFPAA---------------------NAPGEIAKYMETVKLLDYTEKPL 316 (364)
T ss_dssp CTTGGGTTC-HHHHHHHHHHHHHCHHHHHHHHSCTT---------------------CCCHHHHHHHHHHHTCCTTCCCC
T ss_pred CCccccccC-HHHHHHHHHHhhhhHHHHHHHhcccc---------------------cCHHHHHHHHHHHhcCCCCCCCC
Confidence 999743222 11222222222223344444433211 23456889999999999999999
Q ss_pred CCCC
Q 046598 983 MTNV 986 (986)
Q Consensus 983 ~~eV 986 (986)
+++|
T Consensus 317 ~~~l 320 (364)
T 3op5_A 317 YENL 320 (364)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8763
No 90
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=4.2e-39 Score=348.09 Aligned_cols=253 Identities=22% Similarity=0.307 Sum_probs=202.8
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
..++|++.+.||+|+||.||+|.+..+++.||||+++... ....+.+.+|+.+++.++||||+++++++ ..++.
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 79 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR-----REGNI 79 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EETTE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEE-----EcCCE
Confidence 3567999999999999999999999889999999997533 33457889999999999999999999984 45578
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHI 844 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 844 (986)
.++||||+++++|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 80 ~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl 146 (276)
T 2yex_A 80 QYLFLEYCSGGELFDRIEP----------DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKI 146 (276)
T ss_dssp EEEEEECCTTEEGGGGSBT----------TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEEecCCCcHHHHHhh----------ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEE
Confidence 8999999999999999842 24689999999999999999999999 9999999999999999999999
Q ss_pred cccccceecCCCCCccccccccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhC
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEV-SISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTAL 923 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 923 (986)
+|||.+................|++.|+|||++.+..+ +.++||||||+++|||++|+.||.........+..+....
T Consensus 147 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~- 225 (276)
T 2yex_A 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK- 225 (276)
T ss_dssp CCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTC-
T ss_pred eeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcc-
Confidence 99999986543332233345678999999999988765 7899999999999999999999975333221111111100
Q ss_pred CCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 924 PDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 924 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
....+ ....+..+.+++.+||+.||++|||++||
T Consensus 226 -----------~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~i 259 (276)
T 2yex_A 226 -----------TYLNP------------------WKKIDSAPLALLHKILVENPSARITIPDI 259 (276)
T ss_dssp -----------TTSTT------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred -----------cccCc------------------hhhcCHHHHHHHHHHCCCCchhCCCHHHH
Confidence 00000 01223456789999999999999998764
No 91
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=7.1e-40 Score=368.65 Aligned_cols=269 Identities=24% Similarity=0.322 Sum_probs=206.8
Q ss_pred hHHHHHhhcCCCCCcccccccceeEEEEE-----ECCCCeEEEEEEeeccC-chhHHHHHHHHHHHhcC-CCCcceeeee
Q 046598 680 YQNLYNATDRFSSVNQIGEGSFGSVFKGI-----LDDGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNI-RHRNLVKILT 752 (986)
Q Consensus 680 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~-----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~ 752 (986)
..+.....++|++.+.||+|+||.||+|+ ...+++.||||+++... ....+.+.+|+++++++ +||||+++++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~ 93 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 93 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeee
Confidence 34444567899999999999999999999 44557899999997533 33456799999999999 8999999999
Q ss_pred eccccccCCCceEEEEEEeccCCCHhHhhccCCCCCc-------------------------------------------
Q 046598 753 ACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDE------------------------------------------- 789 (986)
Q Consensus 753 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------------------------------------------- 789 (986)
+|. ..+...++||||+++|+|.++++.......
T Consensus 94 ~~~----~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (359)
T 3vhe_A 94 ACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE 169 (359)
T ss_dssp EEC----STTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred eee----cCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence 963 334568999999999999999975432100
Q ss_pred -------------cccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEcccccceecCCC
Q 046598 790 -------------TDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIGDFGLARFLPLS 856 (986)
Q Consensus 790 -------------~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~ 856 (986)
.......+++..++.|+.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 246 (359)
T 3vhe_A 170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246 (359)
T ss_dssp --------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence 000123389999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCchhHHhhhhc
Q 046598 857 SAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLARTALPDHVMDIVDSTL 935 (986)
Q Consensus 857 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 935 (986)
..........||+.|+|||++.+..++.++|||||||++|||+| |+.||....... ............
T Consensus 247 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~~~~~---------- 315 (359)
T 3vhe_A 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRM---------- 315 (359)
T ss_dssp TTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHHTCCC----------
T ss_pred ccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHHHHcCCCC----------
Confidence 44444455678999999999999999999999999999999998 999996432211 111111110000
Q ss_pred ccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 936 LNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..+ ...+.++.+++.+||+.||++|||++||
T Consensus 316 -~~~-------------------~~~~~~l~~li~~~l~~dP~~Rps~~el 346 (359)
T 3vhe_A 316 -RAP-------------------DYTTPEMYQTMLDCWHGEPSQRPTFSEL 346 (359)
T ss_dssp -CCC-------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -CCC-------------------CCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 000 0123457899999999999999998764
No 92
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.4e-39 Score=358.42 Aligned_cols=245 Identities=21% Similarity=0.265 Sum_probs=198.7
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc---CchhHHHHHHHHHHHhcC-CCCcceeeeeeccccccCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL---HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQG 761 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 761 (986)
..++|++.+.||+|+||.||+|++..+++.||||+++.. .....+.+..|.++++.+ +||+|++++++ +..
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~-----~~~ 92 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSC-----FQT 92 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEE-----EEC
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEE-----EEc
Confidence 356899999999999999999999998999999999753 223456788999999988 89999999998 456
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI 841 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 841 (986)
.+..|+||||++||+|.+++.. .+.+++.+++.++.||+.||+|||++ ||+||||||+||+++.++.
T Consensus 93 ~~~~~lv~E~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ 159 (353)
T 2i0e_A 93 MDRLYFVMEYVNGGDLMYHIQQ----------VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGH 159 (353)
T ss_dssp SSEEEEEEECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSC
T ss_pred CCEEEEEEeCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCc
Confidence 6889999999999999999952 23589999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHh
Q 046598 842 AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLART 921 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 921 (986)
+||+|||+++...... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 160 vkL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~~- 231 (353)
T 2i0e_A 160 IKIADFGMCKENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELFQ- 231 (353)
T ss_dssp EEECCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH-
T ss_pred EEEEeCCcccccccCC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH-----HHHHH-
Confidence 9999999998543221 223446799999999999999999999999999999999999999963211 11111
Q ss_pred hCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCC
Q 046598 922 ALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSM 983 (986)
Q Consensus 922 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 983 (986)
.+...... -+ ...+.++.+++.+|++.||++||++
T Consensus 232 -------~i~~~~~~-~p-------------------~~~s~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 232 -------SIMEHNVA-YP-------------------KSMSKEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp -------HHHHCCCC-CC-------------------TTSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred -------HHHhCCCC-CC-------------------CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 11110000 00 0223457799999999999999976
No 93
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.3e-39 Score=354.72 Aligned_cols=275 Identities=23% Similarity=0.315 Sum_probs=199.0
Q ss_pred HhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC--chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 685 NATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 685 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
...++|++.++||+|+||+||+|++.. ++.||+|+++... ....+.+.+|++++++++||||++++++ +..+
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~-----~~~~ 91 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV-----IHSE 91 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEETT-SCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEE-----ECCS
T ss_pred chHhhhHhhhhccCCCCeEEEEEEECC-CCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeE-----EccC
Confidence 346789999999999999999999975 8899999986432 2334678899999999999999999999 4566
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
...++||||++ ++|.+++.. ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 92 ~~~~lv~e~~~-~~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~ 158 (311)
T 3niz_A 92 RCLTLVFEFME-KDLKKVLDE---------NKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGAL 158 (311)
T ss_dssp SCEEEEEECCS-EEHHHHHHT---------CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCE
T ss_pred CEEEEEEcCCC-CCHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCE
Confidence 78999999997 588888852 234589999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHh
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG-SEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLART 921 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 921 (986)
||+|||+++...... .......+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+ ........
T Consensus 159 kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~ 235 (311)
T 3niz_A 159 KLADFGLARAFGIPV--RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSI 235 (311)
T ss_dssp EECCCTTCEETTSCC--C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHH
T ss_pred EEccCcCceecCCCc--ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH
Confidence 999999998764322 22334568999999999876 568999999999999999999999997543322 12222111
Q ss_pred hC---CCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 922 AL---PDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 922 ~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.. +.......+......... .. ...............++.+++.+|++.||++|||++|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 298 (311)
T 3niz_A 236 LGTPNPREWPQVQELPLWKQRTF---QV--FEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDA 298 (311)
T ss_dssp HCCCCTTTSGGGTTSHHHHSCCC---CC--CCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HCCCChHHhhhhhccchhhhccc---cc--ccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 11 111111000000000000 00 00000000111234567899999999999999998764
No 94
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.9e-38 Score=380.94 Aligned_cols=387 Identities=20% Similarity=0.218 Sum_probs=224.8
Q ss_pred CCcCCCCCCCCCCCCCc----ceeeEecCCCCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccc
Q 046598 35 DPLGVLASWNESSHFCQ----WRGVTCSRRHQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLR 110 (986)
Q Consensus 35 ~~~~~l~~w~~~~~~c~----w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 110 (986)
+....+++|.++.+||. |.++.|+. .++....... ....-..++.++.|++++|.+....+..|.+++
T Consensus 4 ~~~~~l~~~~~~~~C~~~~~~~~c~~~~~------~i~~~~~~~~--~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~ 75 (597)
T 3oja_B 4 QQRYNVKPRQPEYKCIDSNLQYDCVFYDV------HIDMQTQDVY--FGFEDITLNNQKIVTFKNSTMRKLPAALLDSFR 75 (597)
T ss_dssp -------CCCSEECCCCC--CCSEEECSC------EECSSCCCCE--ESCSSGGGCCCSEEEESSCEESEECTHHHHHCC
T ss_pred cccccccCCCCCCcCcccCcCceeEecCc------eecccccccc--cCcccccCCCceEEEeeCCCCCCcCHHHHccCC
Confidence 44556899998888874 66666541 1221111111 111122356677777777777665556667777
Q ss_pred cCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeecc
Q 046598 111 RLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLS 190 (986)
Q Consensus 111 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 190 (986)
+|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|+
T Consensus 76 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls 155 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMS 155 (597)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEee
Confidence 77777777777776666667777777777777777766666666666666666666666665444455666666666666
Q ss_pred CCcccCcCcchhhccCCCceeecccccccccCCccccCCCCccEEeccccccccccCCcccccccccceEEecCceeccc
Q 046598 191 GNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGA 270 (986)
Q Consensus 191 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~ 270 (986)
+|.+++..|..|+.+++|++|+|++|++++. +
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~----------------------------------------------- 187 (597)
T 3oja_B 156 NNNLERIEDDTFQATTSLQNLQLSSNRLTHV-D----------------------------------------------- 187 (597)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-C-----------------------------------------------
T ss_pred CCcCCCCChhhhhcCCcCcEEECcCCCCCCc-C-----------------------------------------------
Confidence 6666655555566666666666555555421 0
Q ss_pred CCccccCCCCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCCCc
Q 046598 271 IPPTISNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSLPA 350 (986)
Q Consensus 271 ~p~~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~ 350 (986)
++.+++|+.|+
T Consensus 188 ----~~~l~~L~~L~----------------------------------------------------------------- 198 (597)
T 3oja_B 188 ----LSLIPSLFHAN----------------------------------------------------------------- 198 (597)
T ss_dssp ----GGGCTTCSEEE-----------------------------------------------------------------
T ss_pred ----hhhhhhhhhhh-----------------------------------------------------------------
Confidence 01111122222
Q ss_pred ccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccccc
Q 046598 351 CISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKL 430 (986)
Q Consensus 351 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L 430 (986)
+++|.+++ +....+|+.|++++|.++...+. +
T Consensus 199 -------------l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~-~----------------------------- 230 (597)
T 3oja_B 199 -------------VSYNLLST-----LAIPIAVEELDASHNSINVVRGP-V----------------------------- 230 (597)
T ss_dssp -------------CCSSCCSE-----EECCTTCSEEECCSSCCCEEECS-C-----------------------------
T ss_pred -------------cccCcccc-----ccCCchhheeeccCCcccccccc-c-----------------------------
Confidence 22222211 01112344444444444311110 0
Q ss_pred cEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccC
Q 046598 431 FILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFG 510 (986)
Q Consensus 431 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 510 (986)
.++|+.|+|++|.+++. . .++.+++|+.|+|++|.|++..|..|..+++|+.|+|++
T Consensus 231 --------------------~~~L~~L~L~~n~l~~~--~-~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 287 (597)
T 3oja_B 231 --------------------NVELTILKLQHNNLTDT--A-WLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISN 287 (597)
T ss_dssp --------------------CSCCCEEECCSSCCCCC--G-GGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTT
T ss_pred --------------------CCCCCEEECCCCCCCCC--h-hhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCC
Confidence 12455555555555531 2 244556666666666666666666666667777777777
Q ss_pred ccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccC
Q 046598 511 NKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVP 590 (986)
Q Consensus 511 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 590 (986)
|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|+|++. | +..+++|+.|+|++|+++|...
T Consensus 288 N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~ 362 (597)
T 3oja_B 288 NRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSL 362 (597)
T ss_dssp SCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHH
T ss_pred CCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhH
Confidence 77763 5666666777777777777777 4666677777888888888887754 2 5667788888888888887643
Q ss_pred CccccccccceeeeCCcccccCCCCCCCCCCCC
Q 046598 591 TQGVFKNASITSVFGNLKLCGGIPEFQLPTCSS 623 (986)
Q Consensus 591 ~~~~~~~~~~~~~~~n~~lcg~~~~~~~~~~~~ 623 (986)
. ..+..+....+.+++..|+.+.......|..
T Consensus 363 ~-~~~~~~~~~~~~~~~~~C~~~~~~~~~~cc~ 394 (597)
T 3oja_B 363 R-ALFRNVARPAVDDADQHCKIDYQLEHGLCCK 394 (597)
T ss_dssp H-HHTTTCCTTTBCCCCCCCCTTCEEETTEEEE
T ss_pred H-HHHHHHhhhccccccccCCcchhccCCcccc
Confidence 3 3455566667788999999866554455543
No 95
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-40 Score=369.57 Aligned_cols=257 Identities=24% Similarity=0.393 Sum_probs=199.0
Q ss_pred hcCCCCCcccccccceeEEEEEE-----CCCCeEEEEEEeecc-CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGIL-----DDGRTTIAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ 760 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 760 (986)
.++|++.+.||+|+||.||+|++ ..+++.||||+++.. ......++.+|+.++++++||||+++++++ .
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~ 144 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS-----L 144 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----C
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEE-----e
Confidence 46799999999999999999995 345778999998643 334456789999999999999999999994 4
Q ss_pred CCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCC
Q 046598 761 GNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDM 840 (986)
Q Consensus 761 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 840 (986)
.....++||||+++|+|.+++...... ......+++.+++.++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 145 ~~~~~~lv~e~~~~g~L~~~l~~~~~~---~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~ 218 (367)
T 3l9p_A 145 QSLPRFILLELMAGGDLKSFLRETRPR---PSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 218 (367)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHSCC---SSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSS
T ss_pred cCCCCEEEEEeCCCCCHHHHHHhhccc---cCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCC
Confidence 557789999999999999999744322 12335689999999999999999999999 999999999999999555
Q ss_pred ---cEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHH
Q 046598 841 ---IAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLH 916 (986)
Q Consensus 841 ---~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~ 916 (986)
.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... .
T Consensus 219 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~-----~ 293 (367)
T 3l9p_A 219 PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-----Q 293 (367)
T ss_dssp TTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----H
T ss_pred CCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----H
Confidence 599999999975532222233334567899999999999999999999999999999998 9999863211 1
Q ss_pred HHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 917 NLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 917 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.... .+.......+ ...++.++.+++.+||+.||++|||++||
T Consensus 294 ~~~~---------~i~~~~~~~~------------------~~~~~~~l~~li~~~l~~dP~~Rps~~ei 336 (367)
T 3l9p_A 294 EVLE---------FVTSGGRMDP------------------PKNCPGPVYRIMTQCWQHQPEDRPNFAII 336 (367)
T ss_dssp HHHH---------HHHTTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHH---------HHHcCCCCCC------------------CccCCHHHHHHHHHHcCCCHhHCcCHHHH
Confidence 1111 1110000000 01234457899999999999999998764
No 96
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.1e-39 Score=367.33 Aligned_cols=251 Identities=23% Similarity=0.424 Sum_probs=188.1
Q ss_pred hcCCCCCcccccccceeEEEEEEC---CCCeEEEEEEeecc-CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILD---DGRTTIAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
.++|++.+.||+|+||.||+|++. ..+..||||+++.. .....+++.+|++++++++||||++++++| ...
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~ 118 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-----TKS 118 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CSS
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----eeC
Confidence 458999999999999999999986 45678999999754 334456899999999999999999999995 445
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
...++||||+++|+|.++++. ....+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 119 ~~~~lv~e~~~~~sL~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 186 (373)
T 2qol_A 119 KPVMIVTEYMENGSLDSFLRK---------HDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVC 186 (373)
T ss_dssp SSCEEEEECCTTCBHHHHHHT---------TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCE
T ss_pred CceEEEEeCCCCCcHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCE
Confidence 788999999999999999962 234689999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCc-cccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHH
Q 046598 843 HIGDFGLARFLPLSSAQ-TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~ 920 (986)
||+|||+++........ .......+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ...
T Consensus 187 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~-----~~~-- 259 (373)
T 2qol_A 187 KVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-----QDV-- 259 (373)
T ss_dssp EECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH-----HHH--
T ss_pred EECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HHH--
Confidence 99999999876433221 11222345778999999999999999999999999999998 9999863221 111
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+.+........ ...++.++.+++.+||+.||++||+++||
T Consensus 260 -------~~~i~~~~~~~~------------------~~~~~~~l~~li~~cl~~dp~~RPs~~~i 300 (373)
T 2qol_A 260 -------IKAVDEGYRLPP------------------PMDCPAALYQLMLDCWQKDRNNRPKFEQI 300 (373)
T ss_dssp -------HHHHHTTEECCC------------------CTTCBHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -------HHHHHcCCCCCC------------------CccccHHHHHHHHHHhCcChhhCcCHHHH
Confidence 111111110000 01234567899999999999999998764
No 97
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.5e-39 Score=359.39 Aligned_cols=240 Identities=19% Similarity=0.248 Sum_probs=197.7
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+++++.++||||++++++ +.++.
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~-----~~~~~ 114 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS-----FKDNS 114 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEE-----EECSS
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEE-----EEcCC
Confidence 468999999999999999999999989999999996432 2345678899999999999999999998 45668
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..|+||||+++|+|.+++.. .+.+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 115 ~~~lv~e~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~k 181 (350)
T 1rdq_E 115 NLYMVMEYVAGGEMFSHLRR----------IGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQ 181 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHH----------HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEE
T ss_pred EEEEEEcCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEE
Confidence 89999999999999999952 23589999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhC
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTAL 923 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 923 (986)
|+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 182 L~DFg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~--- 248 (350)
T 1rdq_E 182 VTDFGFAKRVKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-----IQIYE--- 248 (350)
T ss_dssp ECCCTTCEECSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH---
T ss_pred EcccccceeccCC-----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-----HHHHH---
Confidence 9999999876422 2345799999999999999999999999999999999999999963211 11111
Q ss_pred CCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 046598 924 PDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMS 982 (986)
Q Consensus 924 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt 982 (986)
.+..... .-+ ...+.++.+++.+||+.||++||+
T Consensus 249 -----~i~~~~~-~~p-------------------~~~~~~~~~li~~lL~~dp~~R~~ 282 (350)
T 1rdq_E 249 -----KIVSGKV-RFP-------------------SHFSSDLKDLLRNLLQVDLTKRFG 282 (350)
T ss_dssp -----HHHHCCC-CCC-------------------TTCCHHHHHHHHHHSCSCTTTCTT
T ss_pred -----HHHcCCC-CCC-------------------CCCCHHHHHHHHHHhhcCHHhccC
Confidence 0111000 000 012345779999999999999998
No 98
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=7.2e-39 Score=370.55 Aligned_cols=203 Identities=26% Similarity=0.295 Sum_probs=170.5
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcCCCCcceeeeeeccccc-cCCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-YQGN 762 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~ 762 (986)
..++|++.+.||+|+||+||+|++..+++.||||++... .....+++.+|+.+++.++||||+++++++.... ....
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 357899999999999999999999999999999999743 3345678899999999999999999999975432 2344
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
...|+||||+++ ++.+.+. ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~------------~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~ 203 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQ------------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 203 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHT------------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred CeEEEEEeCCCC-CHHHHHh------------hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCE
Confidence 678999999965 5666663 2488999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCc
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
||+|||+|+..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 204 kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g 265 (464)
T 3ttj_A 204 KILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 265 (464)
T ss_dssp EECCCCCC-----C---CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEEEEEeeeecCCC---cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999865432 223446799999999999999999999999999999999999999974
No 99
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3e-39 Score=371.61 Aligned_cols=207 Identities=24% Similarity=0.324 Sum_probs=172.9
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
..++|++.+.||+|+||.||+|++..+++.||||+++.. .....+++.+|++++++++||||+++++++.........
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 457899999999999999999999999999999999642 334457889999999999999999999997554444447
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..|+||||++ ++|.+++.. ...+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~----------~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~k 169 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKT----------PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVK 169 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHS----------SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEE
T ss_pred eEEEEEecCC-cCHHHHHhc----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEE
Confidence 7999999995 699999952 34689999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCc--------------------cccccccccccccccccc-cCCCcCcccchhhHHHHHHHHHhCC
Q 046598 844 IGDFGLARFLPLSSAQ--------------------TSSIGAKGSIGYIAPEYG-LGSEVSISGDVYSYGILLLELITRK 902 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwSlGvvl~elltg~ 902 (986)
|+|||+|+........ ......+||+.|+|||++ .+..++.++||||+||++|||++|.
T Consensus 170 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~ 249 (432)
T 3n9x_A 170 VCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNML 249 (432)
T ss_dssp ECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTC
T ss_pred EccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcc
Confidence 9999999876433211 123556799999999985 5567999999999999999999976
Q ss_pred CCCC
Q 046598 903 KPTD 906 (986)
Q Consensus 903 ~pf~ 906 (986)
.||.
T Consensus 250 ~p~~ 253 (432)
T 3n9x_A 250 QSHI 253 (432)
T ss_dssp TTTC
T ss_pred cccc
Confidence 6654
No 100
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=6.9e-39 Score=356.44 Aligned_cols=257 Identities=22% Similarity=0.319 Sum_probs=197.8
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeecccccc-----
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY----- 759 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 759 (986)
..++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||++++++|.....
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 3567999999999999999999999889999999997533 3355789999999999999999999998643210
Q ss_pred -----------------------------------------------CCCceEEEEEEeccCCCHhHhhccCCCCCcccc
Q 046598 760 -----------------------------------------------QGNDFKALVFEFMHNRSLEEWLHPITREDETDE 792 (986)
Q Consensus 760 -----------------------------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~ 792 (986)
..+...++||||+++++|.+++.....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~------ 157 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS------ 157 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS------
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC------
Confidence 122348999999999999999974322
Q ss_pred CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEcccccceecCCCCCc----------ccc
Q 046598 793 APRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIGDFGLARFLPLSSAQ----------TSS 862 (986)
Q Consensus 793 ~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~----------~~~ 862 (986)
....++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 158 -~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T 3qd2_B 158 -LEDREHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATH 233 (332)
T ss_dssp -GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CC
T ss_pred -ccchhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccc
Confidence 23456778999999999999999999 9999999999999999999999999999876543221 122
Q ss_pred ccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCchhHHhhhhcccCCcch
Q 046598 863 IGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDL 942 (986)
Q Consensus 863 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 942 (986)
....||+.|+|||++.+..++.++|||||||++|||++|..|+... ...... ... ..
T Consensus 234 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~~~--------~~~----~~---- 290 (332)
T 3qd2_B 234 TGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRIITD--------VRN----LK---- 290 (332)
T ss_dssp CSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHHHH--------HHT----TC----
T ss_pred cccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHHHH--------hhc----cC----
Confidence 3456999999999999999999999999999999999987764210 000000 000 00
Q ss_pred hhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 943 IVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..........++.+++.+||+.||++|||++|+
T Consensus 291 -----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 323 (332)
T 3qd2_B 291 -----------FPLLFTQKYPQEHMMVQDMLSPSPTERPEATDI 323 (332)
T ss_dssp -----------CCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHH
T ss_pred -----------CCcccccCChhHHHHHHHHccCCCCcCCCHHHH
Confidence 001112334456789999999999999998764
No 101
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.2e-39 Score=368.61 Aligned_cols=208 Identities=23% Similarity=0.291 Sum_probs=179.6
Q ss_pred HHHHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---chhHHHHHHHHHHHhcCCCCcceeeeeeccccc
Q 046598 682 NLYNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVD 758 (986)
Q Consensus 682 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 758 (986)
++....++|++.++||+|+||+||+|++..+++.||+|+++... ....+.+.+|+.++..++||||++++++
T Consensus 68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~----- 142 (437)
T 4aw2_A 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYA----- 142 (437)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEE-----
T ss_pred cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEE-----
Confidence 33445689999999999999999999999999999999997422 2223458899999999999999999998
Q ss_pred cCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecC
Q 046598 759 YQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDE 838 (986)
Q Consensus 759 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 838 (986)
+.+++..|+||||+++|+|.+++.. ....+++..++.++.||+.||+|||+. +|+||||||+|||++.
T Consensus 143 ~~~~~~~~lV~Ey~~gg~L~~~l~~---------~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~ 210 (437)
T 4aw2_A 143 FQDDNNLYLVMDYYVGGDLLTLLSK---------FEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDM 210 (437)
T ss_dssp EECSSEEEEEECCCTTCBHHHHHHT---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECT
T ss_pred EeeCCEEEEEEecCCCCcHHHHHHH---------ccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcC
Confidence 4566889999999999999999963 234689999999999999999999999 9999999999999999
Q ss_pred CCcEEEcccccceecCCCCCcccccccccccccccccccc-----CCCcCcccchhhHHHHHHHHHhCCCCCCc
Q 046598 839 DMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGL-----GSEVSISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 839 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
++.+||+|||+|+....... ......+||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 211 ~g~vkL~DFGla~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~ 283 (437)
T 4aw2_A 211 NGHIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA 283 (437)
T ss_dssp TSCEEECCCTTCEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred CCCEEEcchhhhhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCC
Confidence 99999999999987643322 2233467999999999987 56799999999999999999999999963
No 102
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.9e-39 Score=377.05 Aligned_cols=201 Identities=26% Similarity=0.373 Sum_probs=160.6
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.++|++.+.||+|+||+||+|++..+++.||||++... .....+++.+|++++++++||||+++++++..........
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 47899999999999999999999999999999998642 3344578899999999999999999999976554456678
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHI 844 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 844 (986)
.|+||||+ +++|.+++. ....+++..++.|+.||+.||+|||+. +|+||||||+|||++.++.+||
T Consensus 132 ~~lv~e~~-~~~L~~~~~----------~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl 197 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFR----------TPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKV 197 (458)
T ss_dssp EEEEECCC-SEEHHHHHH----------SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEE
T ss_pred EEEEEecc-ccchhhhcc----------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEee
Confidence 99999998 679999985 234689999999999999999999999 9999999999999999999999
Q ss_pred cccccceecCCCCCc-------------------------cccccccccccccccccc-cCCCcCcccchhhHHHHHHHH
Q 046598 845 GDFGLARFLPLSSAQ-------------------------TSSIGAKGSIGYIAPEYG-LGSEVSISGDVYSYGILLLEL 898 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwSlGvvl~el 898 (986)
+|||+|+........ ......+||+.|+|||++ .+..++.++|||||||++|||
T Consensus 198 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~el 277 (458)
T 3rp9_A 198 CDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277 (458)
T ss_dssp CCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHH
T ss_pred cccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHH
Confidence 999999876422211 123456789999999976 566799999999999999999
Q ss_pred HhC
Q 046598 899 ITR 901 (986)
Q Consensus 899 ltg 901 (986)
++|
T Consensus 278 ltg 280 (458)
T 3rp9_A 278 LNM 280 (458)
T ss_dssp HTT
T ss_pred HHh
Confidence 994
No 103
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=6e-40 Score=371.80 Aligned_cols=206 Identities=23% Similarity=0.315 Sum_probs=178.3
Q ss_pred HHHHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc---CchhHHHHHHHHHHHhcCCCCcceeeeeeccccc
Q 046598 682 NLYNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD 758 (986)
Q Consensus 682 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 758 (986)
++....++|++.+.||+|+||+||+|++..+++.||+|+++.. .....+.+.+|+.+++.++||||++++++
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~----- 137 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYA----- 137 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEE-----
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEE-----
Confidence 3344567899999999999999999999999999999999642 12233558899999999999999999999
Q ss_pred cCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecC
Q 046598 759 YQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDE 838 (986)
Q Consensus 759 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 838 (986)
+.++...|+||||++||+|.++++. ..+++..++.++.||+.||+|||++ +|+||||||+||+++.
T Consensus 138 ~~~~~~~~lV~E~~~gg~L~~~l~~-----------~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~ 203 (410)
T 3v8s_A 138 FQDDRYLYMVMEYMPGGDLVNLMSN-----------YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDK 203 (410)
T ss_dssp EECSSEEEEEECCCTTEEHHHHHHH-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECT
T ss_pred EEECCEEEEEEeCCCCCcHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECC
Confidence 4566889999999999999999852 2488999999999999999999999 9999999999999999
Q ss_pred CCcEEEcccccceecCCCCCccccccccccccccccccccCCC----cCcccchhhHHHHHHHHHhCCCCCCc
Q 046598 839 DMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSE----VSISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 839 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
++.+||+|||+|+...... .......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||..
T Consensus 204 ~g~ikL~DFG~a~~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 275 (410)
T 3v8s_A 204 SGHLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275 (410)
T ss_dssp TSCEEECCCTTCEECCTTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred CCCEEEeccceeEeeccCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC
Confidence 9999999999998764332 22233567999999999988765 88999999999999999999999963
No 104
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=361.16 Aligned_cols=250 Identities=21% Similarity=0.248 Sum_probs=185.3
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
..++|++.+.||+|+||.||+|++..+++.||||+++... ..+.+.+|++++++++||||++++++| ......
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~ 123 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIF-----ETPTEI 123 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEE-----ECSSEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeE-----ecCCeE
Confidence 4578999999999999999999999889999999997543 346788999999999999999999994 456789
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecC---CCcE
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDE---DMIA 842 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~ 842 (986)
++||||+++++|.+++.. .+.+++.+++.++.||+.||+|||+. +|+||||||+||+++. ++.+
T Consensus 124 ~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~ 190 (349)
T 2w4o_A 124 SLVLELVTGGELFDRIVE----------KGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPL 190 (349)
T ss_dssp EEEECCCCSCBHHHHHTT----------CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCE
T ss_pred EEEEEeCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCE
Confidence 999999999999999952 24589999999999999999999999 9999999999999975 8899
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
||+|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.........+.....
T Consensus 191 kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~-- 265 (349)
T 2w4o_A 191 KIADFGLSKIVEHQ---VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILN-- 265 (349)
T ss_dssp EECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHT--
T ss_pred EEccCccccccCcc---cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHh--
Confidence 99999999865322 2223456899999999999999999999999999999999999998632221111111110
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..... +. +...+.+.++.+++.+||+.||++|||+.|+
T Consensus 266 ----------~~~~~-~~---------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~ 303 (349)
T 2w4o_A 266 ----------CEYYF-IS---------------PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQA 303 (349)
T ss_dssp ----------TCCCC-CT---------------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred ----------CCCcc-CC---------------chhhhCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 00000 00 0001234457799999999999999998763
No 105
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.5e-39 Score=360.20 Aligned_cols=262 Identities=23% Similarity=0.399 Sum_probs=185.0
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCe---EEEEEEeecc--CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRT---TIAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ 760 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 760 (986)
..++|++.+.||+|+||.||+|.+..++. .||||+++.. .....+++.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 45789999999999999999999877654 8999998753 345567899999999999999999999986432111
Q ss_pred -CCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCC
Q 046598 761 -GNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDED 839 (986)
Q Consensus 761 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 839 (986)
.....++||||+++|+|.+++...... .....+++.+++.|+.||+.||+|||++ +|+||||||+||+++.+
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~----~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~ 173 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIG----ENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAED 173 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC-------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTT
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhcc----ccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCC
Confidence 112349999999999999999633211 2223689999999999999999999999 99999999999999999
Q ss_pred CcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHH
Q 046598 840 MIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNL 918 (986)
Q Consensus 840 ~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~ 918 (986)
+.+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |+.||......+ ....
T Consensus 174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~ 251 (323)
T 3qup_A 174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE--IYNY 251 (323)
T ss_dssp SCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHH
T ss_pred CCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH--HHHH
Confidence 9999999999987654433333444557889999999999999999999999999999999 999987432211 1111
Q ss_pred HHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 919 ARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 919 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+........+ ...+.++.+++.+||+.||++|||++||
T Consensus 252 -----------~~~~~~~~~~-------------------~~~~~~l~~li~~~l~~dp~~Rps~~~l 289 (323)
T 3qup_A 252 -----------LIGGNRLKQP-------------------PECMEEVYDLMYQCWSADPKQRPSFTCL 289 (323)
T ss_dssp -----------HHTTCCCCCC-------------------TTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred -----------HhcCCCCCCC-------------------CccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 0000000000 1233467899999999999999997653
No 106
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.9e-39 Score=358.81 Aligned_cols=254 Identities=19% Similarity=0.210 Sum_probs=199.2
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcC-CCCcceeeeeeccccccCCCceE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
.++|++.+.||+|+||.||+|++..+++.||||++..... .+.+.+|+++++++ +||||+++++++ ..+...
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~-----~~~~~~ 80 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFG-----PCGKYN 80 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEE-----EETTEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEE-----ecCCcc
Confidence 4679999999999999999999988899999999875432 35688999999999 999999999984 445789
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc----
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI---- 841 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---- 841 (986)
++||||+ +++|.+++... ...+++.+++.|+.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 81 ~lv~e~~-~~~L~~~~~~~---------~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~ 147 (330)
T 2izr_A 81 AMVLELL-GPSLEDLFDLC---------DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQ 147 (330)
T ss_dssp EEEEECC-CCBHHHHHHHT---------TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTT
T ss_pred EEEEEeC-CCCHHHHHHHc---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCc
Confidence 9999999 99999999632 34689999999999999999999999 9999999999999998887
Q ss_pred -EEEcccccceecCCCCCcc-----ccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccH
Q 046598 842 -AHIGDFGLARFLPLSSAQT-----SSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNL 915 (986)
Q Consensus 842 -~kL~DFG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~ 915 (986)
+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..
T Consensus 148 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~--~~ 225 (330)
T 2izr_A 148 VIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD--TL 225 (330)
T ss_dssp SEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS--SH
T ss_pred eEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc--cH
Confidence 9999999998764332211 123567999999999999999999999999999999999999999743221 11
Q ss_pred HHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 916 HNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 916 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
...... +.+.... .+. .......+ ++.+++.+||+.||++||++++|
T Consensus 226 ~~~~~~--------i~~~~~~-~~~--------------~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l 272 (330)
T 2izr_A 226 KERYQK--------IGDTKRA-TPI--------------EVLCENFP-EMATYLRYVRRLDFFEKPDYDYL 272 (330)
T ss_dssp HHHHHH--------HHHHHHH-SCH--------------HHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHH
T ss_pred HHHHHH--------HHhhhcc-CCH--------------HHHhccCh-HHHHHHHHHHhCCCCCCCCHHHH
Confidence 111100 0000000 000 00000123 78899999999999999998653
No 107
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=355.08 Aligned_cols=275 Identities=24% Similarity=0.300 Sum_probs=196.9
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc--hhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH--GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.++|++.+.||+|+||+||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++ ...+.
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~ 76 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVF-----RRKRR 76 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhhee-----ecCCe
Confidence 3689999999999999999999999899999999864332 2356788999999999999999999994 45578
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHI 844 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 844 (986)
.++||||+++++|.+++. ....+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||
T Consensus 77 ~~lv~e~~~~~~l~~~~~----------~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl 143 (311)
T 4agu_A 77 LHLVFEYCDHTVLHELDR----------YQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKL 143 (311)
T ss_dssp EEEEEECCSEEHHHHHHH----------TSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEE
T ss_pred EEEEEEeCCCchHHHHHh----------hhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEE
Confidence 999999999999999874 234589999999999999999999999 9999999999999999999999
Q ss_pred cccccceecCCCCCccccccccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhC
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG-SEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTAL 923 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 923 (986)
+|||.++...... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+ .........
T Consensus 144 ~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~ 219 (311)
T 4agu_A 144 CDFGFARLLTGPS--DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD--QLYLIRKTL 219 (311)
T ss_dssp CCCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHH
T ss_pred eeCCCchhccCcc--cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHh
Confidence 9999998764322 22234568999999999876 678999999999999999999999997432221 111111111
Q ss_pred CCc---hhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 924 PDH---VMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 924 ~~~---~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
... ........-............... ........+.++.+++.+||+.||++|||++||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 282 (311)
T 4agu_A 220 GDLIPRHQQVFSTNQYFSGVKIPDPEDMEP---LELKFPNISYPALGLLKGCLHMDPTERLTCEQL 282 (311)
T ss_dssp CSCCHHHHHHHHTCGGGTTCCCCCCSSCCC---HHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHH
T ss_pred cccccccccccccccccccCcCCCccccch---hhhhcccccHHHHHHHHHHccCChhhcCCHHHH
Confidence 110 111111000000000000000000 000111345567899999999999999998764
No 108
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.2e-39 Score=361.12 Aligned_cols=250 Identities=24% Similarity=0.388 Sum_probs=191.7
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeE----EEEEEeecc-CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTT----IAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 761 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 761 (986)
.++|++.+.||+|+||+||+|++..+++. ||+|.++.. .....+++.+|+.++++++||||++++++|..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 88 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 88 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES-----
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-----
Confidence 46799999999999999999998766554 577776532 23445789999999999999999999999642
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI 841 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 841 (986)
...++|+||+++|+|.+++.. ....+++..++.|+.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 89 -~~~~~v~e~~~~g~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~ 155 (327)
T 3poz_A 89 -STVQLITQLMPFGCLLDYVRE---------HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 155 (327)
T ss_dssp -SSEEEEEECCTTCBHHHHHHH---------STTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTE
T ss_pred -CCeEEEEEecCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCC
Confidence 347899999999999999963 234689999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHH
Q 046598 842 AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~ 920 (986)
+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||+| |+.||...... ....
T Consensus 156 ~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~--- 230 (327)
T 3poz_A 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISS--- 230 (327)
T ss_dssp EEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHH---
T ss_pred EEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHH---
Confidence 99999999987755444444445567889999999999999999999999999999999 99999743221 1111
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+........ ...++.++.+++.+||+.||++|||++||
T Consensus 231 ---------~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rps~~el 269 (327)
T 3poz_A 231 ---------ILEKGERLPQ------------------PPICTIDVYMIMVKCWMIDADSRPKFREL 269 (327)
T ss_dssp ---------HHHTTCCCCC------------------CTTBCHHHHHHHHHHTCSCGGGSCCHHHH
T ss_pred ---------HHHcCCCCCC------------------CccCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 1111110000 01233457899999999999999998764
No 109
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1e-38 Score=345.13 Aligned_cols=250 Identities=22% Similarity=0.278 Sum_probs=201.8
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
..++|++.+.||+|+||.||+|.+..++..||+|++........+.+.+|++++++++||||+++++++ ..+...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~ 81 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF-----EDNTDI 81 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCeE
Confidence 456799999999999999999999999999999999876566678899999999999999999999994 456889
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEe---cCCCcE
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILL---DEDMIA 842 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~ 842 (986)
++||||+++++|.+++.. ...+++.+++.++.|++.||+|||+. +|+||||||+||++ +.++.+
T Consensus 82 ~lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~ 148 (277)
T 3f3z_A 82 YLVMELCTGGELFERVVH----------KRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPL 148 (277)
T ss_dssp EEEEECCCSCBHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCE
T ss_pred EEEEeccCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcE
Confidence 999999999999999852 34589999999999999999999999 99999999999999 788899
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
||+|||.+....... ......||+.|+|||++.+. ++.++||||||+++|||++|+.||......+ .........
T Consensus 149 ~l~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~ 223 (277)
T 3f3z_A 149 KLIDFGLAARFKPGK---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE-VMLKIREGT 223 (277)
T ss_dssp EECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCC
T ss_pred EEEecccceeccCcc---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhCC
Confidence 999999998764332 22345689999999998664 8999999999999999999999996422110 000000000
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.. .+. ......+.++.+++.+|++.||++|||+.|+
T Consensus 224 ~~-------------~~~---------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~ 259 (277)
T 3f3z_A 224 FT-------------FPE---------------KDWLNVSPQAESLIRRLLTKSPKQRITSLQA 259 (277)
T ss_dssp CC-------------CCH---------------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CC-------------CCc---------------hhhhcCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 00 000 0001234567899999999999999998753
No 110
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4e-39 Score=346.53 Aligned_cols=248 Identities=25% Similarity=0.399 Sum_probs=198.9
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
.++|++.+.||+|+||.||+|.+.. +..||+|+++.... ..+++.+|++++++++||||+++++++ ..+...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 79 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKG-QYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVC-----SKEYPIY 79 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETT-TEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSEE
T ss_pred hhheeeeeeeccCCCceEEEEEecC-ceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCceE
Confidence 5689999999999999999998875 67899999975433 346789999999999999999999994 5567899
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEcc
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIGD 846 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 846 (986)
+||||+++++|.+++.. ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 80 lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~D 147 (268)
T 3sxs_A 80 IVTEYISNGCLLNYLRS---------HGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSD 147 (268)
T ss_dssp EEEECCTTCBHHHHHHH---------HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECC
T ss_pred EEEEccCCCcHHHHHHH---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEcc
Confidence 99999999999999962 234589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCC
Q 046598 847 FGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLARTALPD 925 (986)
Q Consensus 847 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 925 (986)
||.++....... .......+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||...... .....
T Consensus 148 fg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~---- 217 (268)
T 3sxs_A 148 FGMTRYVLDDQY-VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-----EVVLK---- 217 (268)
T ss_dssp TTCEEECCTTCE-EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHH----
T ss_pred Cccceecchhhh-hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-----HHHHH----
Confidence 999987644322 22334556788999999998899999999999999999999 99998632211 11000
Q ss_pred chhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 926 HVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 926 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+........+ ...+.++.+++.+||+.||++|||++||
T Consensus 218 ----~~~~~~~~~~-------------------~~~~~~l~~li~~~l~~~p~~Rps~~~l 255 (268)
T 3sxs_A 218 ----VSQGHRLYRP-------------------HLASDTIYQIMYSCWHELPEKRPTFQQL 255 (268)
T ss_dssp ----HHTTCCCCCC-------------------TTSCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred ----HHcCCCCCCC-------------------CcChHHHHHHHHHHcCCChhhCcCHHHH
Confidence 0000000000 0123457799999999999999998764
No 111
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.1e-39 Score=347.65 Aligned_cols=248 Identities=27% Similarity=0.417 Sum_probs=198.1
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
.++|++.+.||+|+||.||+|.+.. ++.||+|++..... ..+++.+|++++++++||||+++++++ .++...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 81 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVC-----LEQAPIC 81 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSEE
T ss_pred hhhceeeheecCCCccEEEEEEecC-CCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCceE
Confidence 4678999999999999999999975 67899999975432 346799999999999999999999994 4567799
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEcc
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIGD 846 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 846 (986)
+||||+++++|.+++.. ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 82 lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 149 (269)
T 4hcu_A 82 LVFEFMEHGCLSDYLRT---------QRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSD 149 (269)
T ss_dssp EEEECCTTCBHHHHHHT---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECC
T ss_pred EEEEeCCCCcHHHHHHh---------cCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecc
Confidence 99999999999999962 234689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCC
Q 046598 847 FGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLARTALPD 925 (986)
Q Consensus 847 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 925 (986)
||+++...... ........+++.|+|||++.+..++.++||||+|+++|+|++ |+.||...... .....
T Consensus 150 fg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-----~~~~~---- 219 (269)
T 4hcu_A 150 FGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVED---- 219 (269)
T ss_dssp TTGGGGBCCHH-HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHH----
T ss_pred ccccccccccc-cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-----HHHHH----
Confidence 99998654221 222334456788999999998999999999999999999999 99998632111 11110
Q ss_pred chhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 926 HVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 926 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+........+ ...+.++.+++.+||+.||++|||++|+
T Consensus 220 ----~~~~~~~~~~-------------------~~~~~~~~~li~~~l~~~p~~Rps~~~l 257 (269)
T 4hcu_A 220 ----ISTGFRLYKP-------------------RLASTHVYQIMNHCWRERPEDRPAFSRL 257 (269)
T ss_dssp ----HHTTCCCCCC-------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ----HhcCccCCCC-------------------CcCCHHHHHHHHHHccCCcccCcCHHHH
Confidence 0000000000 0123457899999999999999998764
No 112
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=5.8e-39 Score=364.98 Aligned_cols=207 Identities=20% Similarity=0.192 Sum_probs=177.3
Q ss_pred hhcCCCCCcccccc--cceeEEEEEECCCCeEEEEEEeeccC--chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCC
Q 046598 686 ATDRFSSVNQIGEG--SFGSVFKGILDDGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 761 (986)
Q Consensus 686 ~~~~y~~~~~lg~G--~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 761 (986)
..++|++.+.||+| +||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++ ..
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~ 97 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATF-----IA 97 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEE-----EE
Confidence 35789999999999 99999999999889999999997533 33456788999999999999999999994 45
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI 841 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 841 (986)
++..++||||+++|+|.+++.... ...+++..++.|+.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~ 166 (389)
T 3gni_B 98 DNELWVVTSFMAYGSAKDLICTHF--------MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGK 166 (389)
T ss_dssp TTEEEEEEECCTTCBHHHHHHHTC--------TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCC
T ss_pred CCEEEEEEEccCCCCHHHHHhhhc--------ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCC
Confidence 678999999999999999996321 24589999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceecCCCCC-----ccccccccccccccccccccC--CCcCcccchhhHHHHHHHHHhCCCCCCcc
Q 046598 842 AHIGDFGLARFLPLSSA-----QTSSIGAKGSIGYIAPEYGLG--SEVSISGDVYSYGILLLELITRKKPTDIM 908 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvvl~elltg~~pf~~~ 908 (986)
+||+|||.+........ ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 167 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 240 (389)
T 3gni_B 167 VYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 240 (389)
T ss_dssp EEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred EEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 99999999865422111 111223468999999999987 67999999999999999999999999743
No 113
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.6e-37 Score=359.97 Aligned_cols=350 Identities=31% Similarity=0.448 Sum_probs=220.7
Q ss_pred hccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcce
Q 046598 107 DRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRS 186 (986)
Q Consensus 107 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 186 (986)
..+++|+.|++++|.++ .+| .+..+++|++|+|++|.+++..| +.++++|++|++++|.+++..+ ++++++|++
T Consensus 43 ~~l~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHHTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred hHhccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 34556666666666665 344 25566666666666666664433 6666666666666666664443 666666666
Q ss_pred eeccCCcccCcCcchhhccCCCceeecccccccccCCccccCCCCccEEeccccccccccCCcccccccccceEEecCce
Q 046598 187 LFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQ 266 (986)
Q Consensus 187 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~ 266 (986)
|+|++|.+++..+ +..+++|++|+|++|++++ ++ .+.++++ |+.|+++ |.
T Consensus 117 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~-------------------------L~~L~l~-~~ 166 (466)
T 1o6v_A 117 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTS-------------------------LQQLSFG-NQ 166 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTT-------------------------CSEEEEE-ES
T ss_pred EECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCc-------------------------ccEeecC-Cc
Confidence 6666666664322 6666666666666666653 22 2333333 3333332 22
Q ss_pred ecccCCccccCCCCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeecccccccc
Q 046598 267 LTGAIPPTISNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGG 346 (986)
Q Consensus 267 l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~ 346 (986)
+.+.. .+.++++|+.|++++|++++.+.
T Consensus 167 ~~~~~--~~~~l~~L~~L~l~~n~l~~~~~-------------------------------------------------- 194 (466)
T 1o6v_A 167 VTDLK--PLANLTTLERLDISSNKVSDISV-------------------------------------------------- 194 (466)
T ss_dssp CCCCG--GGTTCTTCCEEECCSSCCCCCGG--------------------------------------------------
T ss_pred ccCch--hhccCCCCCEEECcCCcCCCChh--------------------------------------------------
Confidence 22111 14555555555555555442210
Q ss_pred CCCcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccc
Q 046598 347 SLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIG 426 (986)
Q Consensus 347 ~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 426 (986)
+.. .++|+.|++++|++++..| ++.+++|++|++++|.+++. +.+..+++|+.|++++|+++
T Consensus 195 -----l~~-l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~-------- 256 (466)
T 1o6v_A 195 -----LAK-LTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQIS-------- 256 (466)
T ss_dssp -----GGG-CTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC--------
T ss_pred -----hcc-CCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccc--------
Confidence 000 1234555555555554433 55566666666666666632 34555666666655555554
Q ss_pred cccccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchh
Q 046598 427 NLKLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEIL 506 (986)
Q Consensus 427 ~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 506 (986)
+..| +..+++|+.|++++|+++ .++. +..+++|+.|++++|++++..+ +..+++|+.|
T Consensus 257 ---------------~~~~--~~~l~~L~~L~l~~n~l~-~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 314 (466)
T 1o6v_A 257 ---------------NLAP--LSGLTKLTELKLGANQIS-NISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYL 314 (466)
T ss_dssp ---------------CCGG--GTTCTTCSEEECCSSCCC-CCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEE
T ss_pred ---------------cchh--hhcCCCCCEEECCCCccC-cccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEE
Confidence 3333 667778888888888887 3443 5667788888888888876433 7788888888
Q ss_pred hccCccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccc
Q 046598 507 NVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLE 586 (986)
Q Consensus 507 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 586 (986)
+|++|++++..| +..+++|++|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|+++
T Consensus 315 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 315 TLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp ECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEE
T ss_pred ECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCccc
Confidence 888888886655 77888888888888888864 468888888888888888887776 788888888999999888
Q ss_pred cccC
Q 046598 587 GVVP 590 (986)
Q Consensus 587 ~~~p 590 (986)
+.+.
T Consensus 389 ~~p~ 392 (466)
T 1o6v_A 389 NAPV 392 (466)
T ss_dssp CCCB
T ss_pred CCch
Confidence 8543
No 114
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5.1e-39 Score=361.64 Aligned_cols=210 Identities=29% Similarity=0.353 Sum_probs=180.8
Q ss_pred CCCcChHHHHHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCC-----CCccee
Q 046598 675 FPNISYQNLYNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIR-----HRNLVK 749 (986)
Q Consensus 675 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~ 749 (986)
...+++.+.....++|.+.++||+|+||+||+|++..+++.||||+++.. ....+.+..|+++++.+. ||||++
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 34556666666788999999999999999999999988999999998742 234466788999999886 999999
Q ss_pred eeeeccccccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecC
Q 046598 750 ILTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDL 829 (986)
Q Consensus 750 l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dl 829 (986)
+++++ ...+..++||||+ +++|.+++.... ...+++.+++.++.||+.||+|||+. +|+||||
T Consensus 101 ~~~~~-----~~~~~~~lv~e~~-~~~L~~~~~~~~--------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDl 163 (360)
T 3llt_A 101 YHGKF-----MYYDHMCLIFEPL-GPSLYEIITRNN--------YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDL 163 (360)
T ss_dssp EEEEE-----EETTEEEEEECCC-CCBHHHHHHHTT--------TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred cccee-----eECCeeEEEEcCC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCC
Confidence 99984 4457899999999 999999996322 23589999999999999999999999 9999999
Q ss_pred CCCCeEecC-------------------------CCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCc
Q 046598 830 KPSNILLDE-------------------------DMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSI 884 (986)
Q Consensus 830 kp~NIll~~-------------------------~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 884 (986)
||+||+++. ++.+||+|||+|+..... .....||+.|+|||++.+..++.
T Consensus 164 kp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~ 238 (360)
T 3llt_A 164 KPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDV 238 (360)
T ss_dssp SGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCT
T ss_pred CcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCC
Confidence 999999975 789999999999865322 22356899999999999999999
Q ss_pred ccchhhHHHHHHHHHhCCCCCCc
Q 046598 885 SGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 885 ~sDvwSlGvvl~elltg~~pf~~ 907 (986)
++|||||||++|||++|+.||..
T Consensus 239 ~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 239 SSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp THHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccchHHHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999974
No 115
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=6.9e-39 Score=360.55 Aligned_cols=245 Identities=21% Similarity=0.247 Sum_probs=192.7
Q ss_pred CcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEEEEEEec
Q 046598 693 VNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFM 772 (986)
Q Consensus 693 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 772 (986)
.+.||+|+||.||+|.+..+++.||+|+++.......+.+.+|++++++++||||+++++++ ...+..++||||+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~~~lv~E~~ 168 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF-----ESKNDIVLVMEYV 168 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSEEEEEEECC
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEE-----EECCEEEEEEeCC
Confidence 56899999999999999988999999999876656678899999999999999999999994 4567899999999
Q ss_pred cCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEe--cCCCcEEEcccccc
Q 046598 773 HNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILL--DEDMIAHIGDFGLA 850 (986)
Q Consensus 773 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll--~~~~~~kL~DFG~a 850 (986)
++++|.+++. .....+++.+++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 169 ~~~~L~~~l~---------~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a 236 (373)
T 2x4f_A 169 DGGELFDRII---------DESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLA 236 (373)
T ss_dssp TTCEEHHHHH---------HTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSC
T ss_pred CCCcHHHHHH---------hcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCc
Confidence 9999999885 2234689999999999999999999999 99999999999999 56789999999999
Q ss_pred eecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCchhHH
Q 046598 851 RFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALPDHVMDI 930 (986)
Q Consensus 851 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (986)
+....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+.. +
T Consensus 237 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~------------i 300 (373)
T 2x4f_A 237 RRYKPREK---LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE-TLNN------------I 300 (373)
T ss_dssp EECCTTCB---CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHH------------H
T ss_pred eecCCccc---cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH------------H
Confidence 87643322 223469999999999999999999999999999999999999996322110 1111 1
Q ss_pred hhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 931 VDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 931 ~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.......... .....+.++.+++.+|++.||++|||++|+
T Consensus 301 ~~~~~~~~~~----------------~~~~~~~~~~~li~~~L~~dp~~Rps~~e~ 340 (373)
T 2x4f_A 301 LACRWDLEDE----------------EFQDISEEAKEFISKLLIKEKSWRISASEA 340 (373)
T ss_dssp HHTCCCSCSG----------------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred HhccCCCChh----------------hhccCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 1111000000 001234567899999999999999998763
No 116
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.2e-39 Score=362.05 Aligned_cols=252 Identities=22% Similarity=0.257 Sum_probs=190.5
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
..++|++.+.||+|+||+||+|++..+++.||||++.... ...+.+.+|+.+++.++||||+++++++ ......
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~~ 91 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVI-----LTPTHL 91 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEE-----eeCCEE
Confidence 3578999999999999999999999999999999997543 2346788999999999999999999994 456789
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc--EE
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI--AH 843 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~k 843 (986)
++||||+++|+|.+++.. .+.+++.+++.++.|++.||+|||++ ||+||||||+||+++.++. +|
T Consensus 92 ~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~k 158 (361)
T 3uc3_A 92 AIIMEYASGGELYERICN----------AGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLK 158 (361)
T ss_dssp EEEEECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEE
T ss_pred EEEEEeCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEE
Confidence 999999999999999842 24589999999999999999999999 9999999999999987765 99
Q ss_pred EcccccceecCCCCCccccccccccccccccccccCCCcCcc-cchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSIS-GDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
|+|||+++..... .......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||....... .+.......
T Consensus 159 l~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~~ 234 (361)
T 3uc3_A 159 ICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQRI 234 (361)
T ss_dssp ECCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHHH
T ss_pred EeecCcccccccc---CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHHH
Confidence 9999999743222 22234569999999999988887655 899999999999999999997432221 111111110
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
...... .+. ....+.++.+++.+||+.||++|||++|+
T Consensus 235 --------~~~~~~-~~~-----------------~~~~s~~~~~li~~~L~~dP~~Rps~~el 272 (361)
T 3uc3_A 235 --------LSVKYS-IPD-----------------DIRISPECCHLISRIFVADPATRISIPEI 272 (361)
T ss_dssp --------HTTCCC-CCT-----------------TSCCCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred --------hcCCCC-CCC-----------------cCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 000000 000 00123457799999999999999998763
No 117
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=5.3e-39 Score=354.36 Aligned_cols=260 Identities=24% Similarity=0.386 Sum_probs=203.5
Q ss_pred hcCCCCCcccccccceeEEEEEEC-----CCCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILD-----DGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ 760 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 760 (986)
.++|.+.+.||+|+||.||+|.+. .+++.||||+++... ....+.+.+|++++++++||||+++++++ .
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~ 96 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC-----S 96 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----C
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEE-----e
Confidence 568999999999999999999983 445899999997533 34457889999999999999999999994 4
Q ss_pred CCceEEEEEEeccCCCHhHhhccCCCCC--------------ccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 046598 761 GNDFKALVFEFMHNRSLEEWLHPITRED--------------ETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAH 826 (986)
Q Consensus 761 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH 826 (986)
.++..++||||+++++|.+++....... ........+++.+++.++.||+.||+|||++ +|+|
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH 173 (314)
T 2ivs_A 97 QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVH 173 (314)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcc
Confidence 5677999999999999999997543210 0001234589999999999999999999999 9999
Q ss_pred ecCCCCCeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCC
Q 046598 827 CDLKPSNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPT 905 (986)
Q Consensus 827 ~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf 905 (986)
|||||+||+++.++.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus 174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 253 (314)
T 2ivs_A 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253 (314)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred cccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999987754444434445567889999999999999999999999999999999 99998
Q ss_pred CccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCC
Q 046598 906 DIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTN 985 (986)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~e 985 (986)
...... ..... +........ ...++.++.+++.+||+.||++|||++|
T Consensus 254 ~~~~~~--~~~~~------------~~~~~~~~~------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ 301 (314)
T 2ivs_A 254 PGIPPE--RLFNL------------LKTGHRMER------------------PDNCSEEMYRLMLQCWKQEPDKRPVFAD 301 (314)
T ss_dssp TTCCGG--GHHHH------------HHTTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCHH--HHHHH------------hhcCCcCCC------------------CccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 643221 11111 111000000 0123456789999999999999999876
Q ss_pred C
Q 046598 986 V 986 (986)
Q Consensus 986 V 986 (986)
|
T Consensus 302 l 302 (314)
T 2ivs_A 302 I 302 (314)
T ss_dssp H
T ss_pred H
Confidence 4
No 118
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.7e-39 Score=351.84 Aligned_cols=253 Identities=30% Similarity=0.461 Sum_probs=186.7
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC--chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
..++|++.++||+|+||+||+|++.. .||||+++... ....+.+.+|++++++++||||+++++++ ...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~------~~~ 92 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS------TAP 92 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE------CSS
T ss_pred CccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec------cCC
Confidence 35689999999999999999998754 59999987433 34457799999999999999999999973 235
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..++||||+++++|.+++. .....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 93 ~~~lv~e~~~~~~L~~~l~---------~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~k 160 (289)
T 3og7_A 93 QLAIVTQWCEGSSLYHHLH---------ASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVK 160 (289)
T ss_dssp SCEEEEECCCEEEHHHHHT---------TC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEE
T ss_pred ccEEEEEecCCCcHHHHHh---------hccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEE
Confidence 6799999999999999995 2234689999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCcccccccccccccccccccc---CCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHH
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGL---GSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~ 920 (986)
|+|||+++...............||+.|+|||++. +..++.++|||||||++|||++|+.||......+........
T Consensus 161 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~ 240 (289)
T 3og7_A 161 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240 (289)
T ss_dssp ECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHH
T ss_pred EccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcc
Confidence 99999998654333333334467899999999986 567899999999999999999999999743221111111111
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
......... ....++.++.+++.+||+.||++|||++||
T Consensus 241 ~~~~~~~~~---------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~el 279 (289)
T 3og7_A 241 GSLSPDLSK---------------------------VRSNCPKRMKRLMAECLKKKRDERPSFPRI 279 (289)
T ss_dssp TSCCCCTTS---------------------------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cccCcchhh---------------------------ccccCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 111110000 001234568899999999999999998764
No 119
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=6e-39 Score=351.04 Aligned_cols=255 Identities=16% Similarity=0.179 Sum_probs=200.4
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcC-CCCcceeeeeeccccccCCCceE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
.++|++.+.||+|+||.||+|.+..+++.||||++.... ..+.+.+|+++++.+ +|+++++++++ +..+...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~-----~~~~~~~ 81 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYF-----GQEGLHN 81 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEE-----EEETTEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEee-----cCCCcee
Confidence 467999999999999999999998889999999986432 335678899999999 89999999998 4456789
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc----
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI---- 841 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---- 841 (986)
++||||+ +++|.+++... ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 82 ~lv~e~~-~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~ 148 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLC---------GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNAN 148 (298)
T ss_dssp EEEEECC-CCBHHHHHHHT---------TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTT
T ss_pred EEEEEec-CCCHHHHHHHh---------ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCC
Confidence 9999999 99999999632 34589999999999999999999999 9999999999999987776
Q ss_pred -EEEcccccceecCCCCCc-----cccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccH
Q 046598 842 -AHIGDFGLARFLPLSSAQ-----TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNL 915 (986)
Q Consensus 842 -~kL~DFG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~ 915 (986)
+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 149 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-- 226 (298)
T 1csn_A 149 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-- 226 (298)
T ss_dssp CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH--
T ss_pred eEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc--
Confidence 999999999876543221 123446699999999999999999999999999999999999999975322111
Q ss_pred HHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 916 HNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 916 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..... .+....... + .......++.++.+++.+||+.||++|||+++|
T Consensus 227 ~~~~~--------~~~~~~~~~-~--------------~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l 274 (298)
T 1csn_A 227 KQKYE--------RIGEKKQST-P--------------LRELCAGFPEEFYKYMHYARNLAFDATPDYDYL 274 (298)
T ss_dssp HHHHH--------HHHHHHHHS-C--------------HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHH
T ss_pred HHHHH--------HHHhhccCc-c--------------HHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHH
Confidence 11000 000000000 0 000011245678899999999999999998764
No 120
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.9e-37 Score=361.06 Aligned_cols=345 Identities=24% Similarity=0.379 Sum_probs=191.9
Q ss_pred CCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeE
Q 046598 84 NLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHI 163 (986)
Q Consensus 84 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 163 (986)
.+++|+.|++++|.+.. +| .+..+++|++|+|++|.+++..| +..+++|++|++++|.+++..+ ++++++|++|
T Consensus 44 ~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 117 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGL 117 (466)
T ss_dssp HHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred HhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEE
Confidence 45667778888877764 44 37778888888888888875443 7788888888888888875544 7788888888
Q ss_pred EccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceeecccccccccCCccccCCCCccEEeccccccc
Q 046598 164 SVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQ 243 (986)
Q Consensus 164 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~ 243 (986)
++++|++++..+ +.++++|++|++++|.+++ ++ .++.+++|++|+++ |.+.+.. .+.++++|+.|++++|.+.
T Consensus 118 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 118 TLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVS 190 (466)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCC
Confidence 888888875543 7788888888888888874 33 47788888888886 4444322 2555555555555555544
Q ss_pred cccCCcccccccccceEEecCceecccCCccccCCCCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcc
Q 046598 244 GAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLN 323 (986)
Q Consensus 244 ~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~ 323 (986)
+. + .+..+++|++|++++|++++..| ++.+++
T Consensus 191 ~~-~--~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~------------------------------------------- 222 (466)
T 1o6v_A 191 DI-S--VLAKLTNLESLIATNNQISDITP--LGILTN------------------------------------------- 222 (466)
T ss_dssp CC-G--GGGGCTTCSEEECCSSCCCCCGG--GGGCTT-------------------------------------------
T ss_pred CC-h--hhccCCCCCEEEecCCccccccc--ccccCC-------------------------------------------
Confidence 21 1 12234444444444444443322 333333
Q ss_pred cccccccccccceeeccccccccCCCcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccC
Q 046598 324 FLCSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGE 403 (986)
Q Consensus 324 ~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 403 (986)
|+.|++++|++++. ..+..+++|++|++++|.+++..+ +..
T Consensus 223 -----------------------------------L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~ 263 (466)
T 1o6v_A 223 -----------------------------------LDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSG 263 (466)
T ss_dssp -----------------------------------CCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTT
T ss_pred -----------------------------------CCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhc
Confidence 44444444444432 245556666666666666664433 555
Q ss_pred CCCCCEEEccCccceeecCcccccccccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEE
Q 046598 404 LQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLD 483 (986)
Q Consensus 404 l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~ 483 (986)
+++|+.|++++|++++..+ .....+|++|++++|++++..+ +..+++|+.|++++|++++..| +..+++|+.|+
T Consensus 264 l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~---~~~l~~L~~L~ 337 (466)
T 1o6v_A 264 LTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP---VSSLTKLQRLF 337 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG---GGGCTTCCEEE
T ss_pred CCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh---hccCccCCEeE
Confidence 6666666666555553221 1111123333333333332222 3444455555555555543222 33444455555
Q ss_pred ccCCcccccCCcccccccccchhhccCccccccCcccccCCccccEEeccccccc
Q 046598 484 LSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQ 538 (986)
Q Consensus 484 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 538 (986)
+++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|.++
T Consensus 338 l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 338 FYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp CCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEE
T ss_pred CCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCccc
Confidence 555555432 234444555555555555544333 444455555555555544
No 121
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=9.4e-39 Score=347.43 Aligned_cols=247 Identities=26% Similarity=0.410 Sum_probs=194.9
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchh-------HHHHHHHHHHHhcCCCCcceeeeeecccccc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGA-------FKSFIAECNTLKNIRHRNLVKILTACSGVDY 759 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 759 (986)
.++|++.+.||+|+||+||+|++..+++.||+|++....... .+.+.+|++++++++||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~---- 93 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH---- 93 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEET----
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeec----
Confidence 468999999999999999999999889999999986432211 167899999999999999999999853
Q ss_pred CCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeecCCCCCeEec
Q 046598 760 QGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPP--IAHCDLKPSNILLD 837 (986)
Q Consensus 760 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~ 837 (986)
+. .++||||+++|+|.+++. .....+++..++.++.|++.||+|||++ + |+||||||+||+++
T Consensus 94 -~~--~~lv~e~~~~~~L~~~l~---------~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~ 158 (287)
T 4f0f_A 94 -NP--PRMVMEFVPCGDLYHRLL---------DKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQ 158 (287)
T ss_dssp -TT--TEEEEECCTTCBHHHHHH---------CTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEES
T ss_pred -CC--CeEEEEecCCCCHHHHHh---------cccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEe
Confidence 22 269999999999999885 2334689999999999999999999999 8 99999999999998
Q ss_pred CCCc-----EEEcccccceecCCCCCcccccccccccccccccccc--CCCcCcccchhhHHHHHHHHHhCCCCCCcccc
Q 046598 838 EDMI-----AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGL--GSEVSISGDVYSYGILLLELITRKKPTDIMFE 910 (986)
Q Consensus 838 ~~~~-----~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~ 910 (986)
.++. +||+|||+++.... ......||+.|+|||++. ...++.++||||+||++|||++|+.||.....
T Consensus 159 ~~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 233 (287)
T 4f0f_A 159 SLDENAPVCAKVADFGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY 233 (287)
T ss_dssp CCCTTCSCCEEECCCTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred ccCCCCceeEEeCCCCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccc
Confidence 8776 99999999975422 233456899999999984 45688999999999999999999999974333
Q ss_pred ccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 911 GDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
............ ...... ...++.++.+++.+||+.||++|||++||
T Consensus 234 ~~~~~~~~~~~~-----------~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l 280 (287)
T 4f0f_A 234 GKIKFINMIREE-----------GLRPTI------------------PEDCPPRLRNVIELCWSGDPKKRPHFSYI 280 (287)
T ss_dssp CHHHHHHHHHHS-----------CCCCCC------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cHHHHHHHHhcc-----------CCCCCC------------------CcccCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 221111111110 000000 01234567899999999999999998764
No 122
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.1e-39 Score=353.28 Aligned_cols=280 Identities=24% Similarity=0.294 Sum_probs=199.3
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc-----hhHHHHHHHHHHHhcC---CCCcceeeeeecccc
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH-----GAFKSFIAECNTLKNI---RHRNLVKILTACSGV 757 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~ 757 (986)
..++|++.+.||+|+||+||+|++..+++.||||+++.... .....+.+|+++++++ +||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 46799999999999999999999998899999999874321 1234667788777766 499999999997544
Q ss_pred ccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEec
Q 046598 758 DYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLD 837 (986)
Q Consensus 758 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 837 (986)
........++||||+. ++|.+++.... ...+++.+++.|+.||+.||+|||++ +|+||||||+||+++
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~--------~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~ 154 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAP--------PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVT 154 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCC--------TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhcc--------CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEc
Confidence 3333346899999996 69999996322 23489999999999999999999999 999999999999999
Q ss_pred CCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHH
Q 046598 838 EDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHN 917 (986)
Q Consensus 838 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~ 917 (986)
.++.+||+|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ....
T Consensus 155 ~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~ 230 (308)
T 3g33_A 155 SGGTVKLADFGLARIYSYQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGK 230 (308)
T ss_dssp TTSCEEECSCSCTTTSTTC---CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHH
T ss_pred CCCCEEEeeCccccccCCC---cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence 9999999999999865422 22234578999999999999999999999999999999999999997432211 1111
Q ss_pred HHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 918 LARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 918 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
...........++ .... ..+.........+. ......+...++.+++.+|++.||++|||++|+
T Consensus 231 i~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 294 (308)
T 3g33_A 231 IFDLIGLPPEDDW-PRDV-SLPRGAFPPRGPRP---VQSVVPEMEESGAQLLLEMLTFNPHKRISAFRA 294 (308)
T ss_dssp HHHHHCCCCTTTS-CSSC-SSCGGGSCCCCCCC---HHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHHhCCCChhhc-cchh-hccccccCCCCCCc---HHHhCccccHHHHHHHHHHhcCCCccCCCHHHH
Confidence 1111000000000 0000 00000000000000 001112344567899999999999999998763
No 123
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=7.1e-39 Score=359.30 Aligned_cols=246 Identities=25% Similarity=0.280 Sum_probs=190.1
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---chhHHHHHHHHHH-HhcCCCCcceeeeeeccccccCCC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---HGAFKSFIAECNT-LKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
.++|++.+.||+|+||.||+|+++.+++.||||+++... ....+.+.+|..+ ++.++||||++++++ +...
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~-----~~~~ 111 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFS-----FQTA 111 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEE-----EECS
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEE-----EEeC
Confidence 467999999999999999999999999999999997533 2234556777776 577899999999998 4566
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
+..|+||||++||+|.++++. ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++++
T Consensus 112 ~~~~lv~E~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~i 178 (373)
T 2r5t_A 112 DKLYFVLDYINGGELFYHLQR----------ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHI 178 (373)
T ss_dssp SEEEEEEECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred CEEEEEEeCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCE
Confidence 889999999999999999952 24588999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
||+|||+++..... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 179 kL~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~~-- 249 (373)
T 2r5t_A 179 VLTDFGLCKENIEH--NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEMYD-- 249 (373)
T ss_dssp EECCCCBCGGGBCC--CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-----HHHHH--
T ss_pred EEeeCccccccccC--CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHH--
Confidence 99999999753222 1223446799999999999999999999999999999999999999963211 11111
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTN 985 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~e 985 (986)
.++...+.. + ...+.++.+++.+|++.||++||++.+
T Consensus 250 ------~i~~~~~~~-~-------------------~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 250 ------NILNKPLQL-K-------------------PNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp ------HHHHSCCCC-C-------------------SSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred ------HHHhcccCC-C-------------------CCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 111111100 0 012345678999999999999999853
No 124
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=8.9e-39 Score=368.69 Aligned_cols=246 Identities=24% Similarity=0.330 Sum_probs=199.8
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
.++|.+.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+++++.++||||+++++++ ....
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~-----~~~~ 89 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVI-----STPS 89 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EECC
Confidence 467999999999999999999999889999999997432 23356789999999999999999999994 4567
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..++||||+++|+|.+++.. .+.+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 90 ~~~lv~E~~~gg~L~~~l~~----------~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vk 156 (476)
T 2y94_A 90 DIFMVMEYVSGGELFDYICK----------NGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAK 156 (476)
T ss_dssp EEEEEEECCSSEEHHHHTTS----------SSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEE
T ss_pred EEEEEEeCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeE
Confidence 89999999999999999952 34689999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEV-SISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
|+|||+++...... .....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... .....
T Consensus 157 L~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-----~~~~~-- 226 (476)
T 2y94_A 157 IADFGLSNMMSDGE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV-----PTLFK-- 226 (476)
T ss_dssp ECCCSSCEECCTTC---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS-----HHHHH--
T ss_pred EEeccchhhccccc---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH-----HHHHH--
Confidence 99999998764322 2234579999999999988766 7899999999999999999999963211 11111
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+.+... ..+. ..+.++.+++.+||+.||++|||++||
T Consensus 227 ------~i~~~~~-~~p~-------------------~~s~~~~~Li~~~L~~dP~~Rpt~~ei 264 (476)
T 2y94_A 227 ------KICDGIF-YTPQ-------------------YLNPSVISLLKHMLQVDPMKRATIKDI 264 (476)
T ss_dssp ------HHHTTCC-CCCT-------------------TCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred ------HHhcCCc-CCCc-------------------cCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 1111100 0010 123457789999999999999998764
No 125
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.6e-38 Score=351.29 Aligned_cols=251 Identities=19% Similarity=0.232 Sum_probs=201.2
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCch------hHHHHHHHHHHHhcCCCCcceeeeeecccccc
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHG------AFKSFIAECNTLKNIRHRNLVKILTACSGVDY 759 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 759 (986)
..++|++.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~----- 84 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY----- 84 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEE-----
Confidence 356799999999999999999999998999999999753321 357799999999999999999999994
Q ss_pred CCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCC
Q 046598 760 QGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDED 839 (986)
Q Consensus 760 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 839 (986)
..+...++||||+++++|.+++.. ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~ 151 (321)
T 2a2a_A 85 ENRTDVVLILELVSGGELFDFLAQ----------KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDK 151 (321)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHT----------CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCT
T ss_pred ecCCEEEEEEEcCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecC
Confidence 556789999999999999999952 24689999999999999999999999 99999999999999988
Q ss_pred C----cEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccH
Q 046598 840 M----IAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNL 915 (986)
Q Consensus 840 ~----~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~ 915 (986)
+ .+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.....
T Consensus 152 ~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----- 223 (321)
T 2a2a_A 152 NIPIPHIKLIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK----- 223 (321)
T ss_dssp TSSSCCEEECCCTTCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----
T ss_pred CCCcCCEEEccCccceecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-----
Confidence 8 79999999998764322 22345689999999999999999999999999999999999999963211
Q ss_pred HHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 916 HNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 916 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
...... +..... ..+ .......+..+.+++.+||+.||++|||++|+
T Consensus 224 ~~~~~~--------i~~~~~-~~~---------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~ 270 (321)
T 2a2a_A 224 QETLAN--------ITSVSY-DFD---------------EEFFSHTSELAKDFIRKLLVKETRKRLTIQEA 270 (321)
T ss_dssp HHHHHH--------HHTTCC-CCC---------------HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHH
T ss_pred HHHHHH--------HHhccc-ccC---------------hhhhcccCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 111100 000000 000 00011234457899999999999999998763
No 126
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=4.5e-38 Score=363.15 Aligned_cols=208 Identities=19% Similarity=0.198 Sum_probs=181.9
Q ss_pred CeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceec
Q 046598 62 QRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRL 141 (986)
Q Consensus 62 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 141 (986)
.+++.||+++|.+++. | .++.+++|++|+|++|++++. | |+.+++|++|+|++|++++. | ++.+++|++|++
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEEC
Confidence 4688999999999974 4 799999999999999999974 4 99999999999999999975 4 899999999999
Q ss_pred ccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceeeccccccccc
Q 046598 142 FHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGT 221 (986)
Q Consensus 142 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 221 (986)
++|++++ +| ++.+++|++|++++|++++. .++++++|++|++++|+..+.+ .++.+++|++|++++|++++
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~- 184 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE- 184 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-
Confidence 9999996 45 89999999999999999974 3899999999999999665555 48899999999999999996
Q ss_pred CCccccCCCCccEEeccccccccccCCcccccccccceEEecCceecccCCccccCCCCCcEEecccccccCCC
Q 046598 222 IPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLTGAA 295 (986)
Q Consensus 222 ~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~ 295 (986)
+| +..+++|+.|+++.|.+.+. + +..+++|++|++++|++++ +| ++.+++|+.|++++|++++.+
T Consensus 185 l~--l~~l~~L~~L~l~~N~l~~~-~---l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~ 249 (457)
T 3bz5_A 185 LD--VSQNKLLNRLNCDTNNITKL-D---LNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD 249 (457)
T ss_dssp CC--CTTCTTCCEEECCSSCCSCC-C---CTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC
T ss_pred ec--cccCCCCCEEECcCCcCCee-c---cccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC
Confidence 55 88889999999999999864 3 3467889999999999987 45 888889999999988887654
No 127
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=3.6e-38 Score=358.72 Aligned_cols=377 Identities=20% Similarity=0.204 Sum_probs=200.6
Q ss_pred CCCCCCCCCCCCc-ceeeEecCCCCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeec
Q 046598 39 VLASWNESSHFCQ-WRGVTCSRRHQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLAL 117 (986)
Q Consensus 39 ~l~~w~~~~~~c~-w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 117 (986)
.+++|..+.+||. |.+..|.....++ +... ........-..+++++.|++++|.+....+..|..+++|++|+|
T Consensus 2 ~~~~~~~~~~C~~~~~~~~c~~~~~~i---~~~~--~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L 76 (390)
T 3o6n_A 2 NVKPRQPEYKCIDSNLQYDCVFYDVHI---DMQT--QDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNL 76 (390)
T ss_dssp -----CCEECBCC------EEEESCEE---CSSC--CCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEEC
T ss_pred CcCCCCCccceehhhhhhccceeeeee---eccc--ccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEEC
Confidence 3688988777774 5555554322222 1111 11112222234566777777777776555555666777777777
Q ss_pred eecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCc
Q 046598 118 HYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGS 197 (986)
Q Consensus 118 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 197 (986)
++|++++..|..|..+++|++|+|++|.+++..|..|+++++|++|+|++|+++...+..|+++++|++|+|++|++++.
T Consensus 77 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~ 156 (390)
T 3o6n_A 77 NDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERI 156 (390)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBC
T ss_pred CCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCcc
Confidence 77776655555666666666666666666655555666666666666666666643334445566666666666665554
Q ss_pred CcchhhccCCCceeecccccccccCCccccCCCCccEEeccccccccccCCcccccccccceEEecCceecccCCccccC
Q 046598 198 IPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISN 277 (986)
Q Consensus 198 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 277 (986)
.|..|..+++|++|+|++|++++. + +..
T Consensus 157 ~~~~~~~l~~L~~L~l~~n~l~~~-~---------------------------------------------------~~~ 184 (390)
T 3o6n_A 157 EDDTFQATTSLQNLQLSSNRLTHV-D---------------------------------------------------LSL 184 (390)
T ss_dssp CTTTTSSCTTCCEEECCSSCCSBC-C---------------------------------------------------GGG
T ss_pred ChhhccCCCCCCEEECCCCcCCcc-c---------------------------------------------------ccc
Confidence 455555555555555555544411 0 111
Q ss_pred CCCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCCCcccccccc
Q 046598 278 ASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSLPACISNLST 357 (986)
Q Consensus 278 l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~ 357 (986)
+++|+.++
T Consensus 185 l~~L~~L~------------------------------------------------------------------------ 192 (390)
T 3o6n_A 185 IPSLFHAN------------------------------------------------------------------------ 192 (390)
T ss_dssp CTTCSEEE------------------------------------------------------------------------
T ss_pred ccccceee------------------------------------------------------------------------
Confidence 11222222
Q ss_pred cceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccccccEEEecc
Q 046598 358 TLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSY 437 (986)
Q Consensus 358 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~ 437 (986)
+++|.+++ +...++|++|++++|.++.. |..+
T Consensus 193 ------l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~~------------------------------------ 224 (390)
T 3o6n_A 193 ------VSYNLLST-----LAIPIAVEELDASHNSINVV-RGPV------------------------------------ 224 (390)
T ss_dssp ------CCSSCCSE-----EECCSSCSEEECCSSCCCEE-ECCC------------------------------------
T ss_pred ------cccccccc-----cCCCCcceEEECCCCeeeec-cccc------------------------------------
Confidence 22222211 01112344444444444421 1110
Q ss_pred cccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccC
Q 046598 438 NFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEI 517 (986)
Q Consensus 438 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 517 (986)
.++|+.|++++|++++ ++ .+..+++|+.|++++|++++..|..|..+++|+.|+|++|+++ .+
T Consensus 225 -------------~~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~ 287 (390)
T 3o6n_A 225 -------------NVELTILKLQHNNLTD-TA--WLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-AL 287 (390)
T ss_dssp -------------CSSCCEEECCSSCCCC-CG--GGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC-EE
T ss_pred -------------cccccEEECCCCCCcc-cH--HHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCc-cc
Confidence 1345555555555542 21 2444555666666666666555566666666666666666666 34
Q ss_pred cccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCCcccccc
Q 046598 518 PSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPTQGVFKN 597 (986)
Q Consensus 518 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~ 597 (986)
|..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+|++. | +..+++|++|++++|++++.... ..+..
T Consensus 288 ~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~ 362 (390)
T 3o6n_A 288 NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRN 362 (390)
T ss_dssp ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTT
T ss_pred CcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchhHH-HHHHH
Confidence 555566667777777777776 4555666677777777777777643 3 55677777778888877764332 23445
Q ss_pred ccceeeeCCcccccCCC
Q 046598 598 ASITSVFGNLKLCGGIP 614 (986)
Q Consensus 598 ~~~~~~~~n~~lcg~~~ 614 (986)
+....+.+++..|+.+.
T Consensus 363 ~~~~~~~~~~~~c~~~~ 379 (390)
T 3o6n_A 363 VARPAVDDADQHCKIDY 379 (390)
T ss_dssp CCTTTBCCCCSCCCTTC
T ss_pred HHhhcccccCceecccc
Confidence 55556677777787543
No 128
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.2e-38 Score=368.41 Aligned_cols=137 Identities=21% Similarity=0.187 Sum_probs=76.6
Q ss_pred cceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCC
Q 046598 478 SLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLS 557 (986)
Q Consensus 478 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 557 (986)
+|+.|++++|+|++..+..|..+++|+.|+|++|++++..+..|..+++|++|+|++|++++..|..|..+++|+.|+|+
T Consensus 225 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 304 (477)
T 2id5_A 225 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVS 304 (477)
T ss_dssp CCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECC
T ss_pred cccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECC
Confidence 44455555555543222344555555555555555554444555555666666666666665556666666666666666
Q ss_pred CccCcccCchhhhcccccceeeccCCccccccCCccccccccceeeeCCcccccCCC
Q 046598 558 QNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPTQGVFKNASITSVFGNLKLCGGIP 614 (986)
Q Consensus 558 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lcg~~~ 614 (986)
+|+|++..+..|..+++|++|+|++|++++..+....+.......+.++...|+.|.
T Consensus 305 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 305 GNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp SSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred CCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 666665555566666666666666666666554333233333345556666666543
No 129
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6e-39 Score=364.53 Aligned_cols=205 Identities=25% Similarity=0.376 Sum_probs=166.2
Q ss_pred HhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeec--cCchhHHHHHHHHHHHhcCC-CCcceeeeeeccccccCC
Q 046598 685 NATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNL--LHHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQG 761 (986)
Q Consensus 685 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 761 (986)
...++|++.+.||+|+||.||+|.+..+++.||||++.. ......+++.+|+.+++++. ||||+++++++.. .+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~---~~ 82 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA---DN 82 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC---TT
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec---CC
Confidence 356789999999999999999999999999999999853 23345567889999999997 9999999999642 34
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI 841 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 841 (986)
....|+||||++ ++|.+++.. ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.
T Consensus 83 ~~~~~lv~e~~~-~~L~~~~~~-----------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~ 147 (388)
T 3oz6_A 83 DRDVYLVFDYME-TDLHAVIRA-----------NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECH 147 (388)
T ss_dssp SSCEEEEEECCS-EEHHHHHHH-----------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCC
T ss_pred CCEEEEEecccC-cCHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCC
Confidence 457899999996 699999852 3588999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceecCCCC-------------------CccccccccccccccccccccC-CCcCcccchhhHHHHHHHHHhC
Q 046598 842 AHIGDFGLARFLPLSS-------------------AQTSSIGAKGSIGYIAPEYGLG-SEVSISGDVYSYGILLLELITR 901 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvvl~elltg 901 (986)
+||+|||+|+.+.... ........+||+.|+|||++.+ ..++.++||||+||++|||++|
T Consensus 148 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g 227 (388)
T 3oz6_A 148 VKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227 (388)
T ss_dssp EEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHS
T ss_pred EEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhC
Confidence 9999999998653211 1122344679999999999887 6799999999999999999999
Q ss_pred CCCCCc
Q 046598 902 KKPTDI 907 (986)
Q Consensus 902 ~~pf~~ 907 (986)
++||..
T Consensus 228 ~~pf~~ 233 (388)
T 3oz6_A 228 KPIFPG 233 (388)
T ss_dssp SCSCCC
T ss_pred CCCCCC
Confidence 999974
No 130
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=6.8e-39 Score=348.54 Aligned_cols=200 Identities=27% Similarity=0.436 Sum_probs=167.9
Q ss_pred cCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc--hhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 688 DRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH--GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 688 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
++|++.+.||+|+||+||+|++ .+++.||+|+++.... ...+.+.+|++++++++||||+++++++ ..++..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI-----HTKKRL 75 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEE-----ECSSCE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEE-----ccCCeE
Confidence 5799999999999999999999 4588999999864332 2346788999999999999999999994 455789
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEc
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIG 845 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 845 (986)
++||||+++ +|.+++.. ....+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 76 ~lv~e~~~~-~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 142 (288)
T 1ob3_A 76 VLVFEHLDQ-DLKKLLDV---------CEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIA 142 (288)
T ss_dssp EEEEECCSE-EHHHHHHT---------STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred EEEEEecCC-CHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEe
Confidence 999999965 99999862 234689999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCccccccccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCcc
Q 046598 846 DFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGS-EVSISGDVYSYGILLLELITRKKPTDIM 908 (986)
Q Consensus 846 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvvl~elltg~~pf~~~ 908 (986)
|||+++...... .......+|+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 143 Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (288)
T 1ob3_A 143 DFGLARAFGIPV--RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV 204 (288)
T ss_dssp CTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ECccccccCccc--cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999998654221 122335689999999998764 5899999999999999999999999743
No 131
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.4e-39 Score=358.21 Aligned_cols=268 Identities=20% Similarity=0.267 Sum_probs=202.0
Q ss_pred HHHHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc-----CchhHHHHHHHHHHHhcCCCCcceeeeeeccc
Q 046598 682 NLYNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL-----HHGAFKSFIAECNTLKNIRHRNLVKILTACSG 756 (986)
Q Consensus 682 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 756 (986)
++....++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|++++++++||||+++++++
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-- 97 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVY-- 97 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEE--
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhh--
Confidence 4566788999999999999999999999999999999998643 234567899999999999999999999994
Q ss_pred cccCCCceEEEEEEeccCCCHhHhhccCCCCCc------------------------------cccCCCccCHHHHHHHH
Q 046598 757 VDYQGNDFKALVFEFMHNRSLEEWLHPITREDE------------------------------TDEAPRSLNLIQRLNIS 806 (986)
Q Consensus 757 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------------------------------~~~~~~~l~~~~~~~i~ 806 (986)
.+++..++||||+++|+|.+++........ .......+++..++.|+
T Consensus 98 ---~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 174 (345)
T 3hko_A 98 ---EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM 174 (345)
T ss_dssp ---ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHH
T ss_pred ---ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHH
Confidence 556889999999999999999953211100 00112345788899999
Q ss_pred HHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCC--cEEEcccccceecCCCCC--ccccccccccccccccccccC--C
Q 046598 807 IDVACALNYLHHDCQPPIAHCDLKPSNILLDEDM--IAHIGDFGLARFLPLSSA--QTSSIGAKGSIGYIAPEYGLG--S 880 (986)
Q Consensus 807 ~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~kL~DFG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~ 880 (986)
.||+.||+|||+. +|+||||||+||+++.++ .+||+|||+++.+..... ........||+.|+|||++.+ .
T Consensus 175 ~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 251 (345)
T 3hko_A 175 RQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNE 251 (345)
T ss_dssp HHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSS
T ss_pred HHHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCC
Confidence 9999999999999 999999999999998776 899999999986532221 122345669999999999875 6
Q ss_pred CcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHH
Q 046598 881 EVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIE 960 (986)
Q Consensus 881 ~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 960 (986)
.++.++|||||||++|||++|+.||......+ .. ..+......... +....
T Consensus 252 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----~~--------~~~~~~~~~~~~----------------~~~~~ 302 (345)
T 3hko_A 252 SYGPKCDAWSAGVLLHLLLMGAVPFPGVNDAD-----TI--------SQVLNKKLCFEN----------------PNYNV 302 (345)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HH--------HHHHHCCCCTTS----------------GGGGG
T ss_pred CCCcHHHHHHHHHHHHHHHHCCCCCCCCChHH-----HH--------HHHHhcccccCC----------------ccccc
Confidence 78999999999999999999999996432211 10 111111110000 00012
Q ss_pred HHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 961 CLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 961 ~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+.++.+++.+||+.||++|||+.|+
T Consensus 303 ~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 303 LSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp SCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 34467799999999999999998763
No 132
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.2e-39 Score=352.69 Aligned_cols=244 Identities=24% Similarity=0.275 Sum_probs=190.0
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC--chhHHHHHHHHHHHhcC-CCCcceeeeeeccccccCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 763 (986)
.++|++.++||+|+||+||+|++..+++.||||++.... .....+...|+..+.++ +||||++++++| .+++
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~-----~~~~ 130 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAW-----EEGG 130 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETT
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEE-----EeCC
Confidence 367999999999999999999999889999999986432 23334555666666555 899999999995 4568
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..++||||+ +++|.+++.. ....+++.+++.|+.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~---------~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~k 197 (311)
T 3p1a_A 131 ILYLQTELC-GPSLQQHCEA---------WGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCK 197 (311)
T ss_dssp EEEEEEECC-CCBHHHHHHH---------HCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEE
T ss_pred EEEEEEecc-CCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEE
Confidence 899999999 7799998852 234699999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhC
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTAL 923 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 923 (986)
|+|||+++...... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+... ...........
T Consensus 198 l~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~~~~~~ 269 (311)
T 3p1a_A 198 LGDFGLLVELGTAG---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGWQQLRQGYL 269 (311)
T ss_dssp ECCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHHHTTTCC
T ss_pred EccceeeeecccCC---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHHhccCC
Confidence 99999998764322 2234568999999999876 7999999999999999999997765421 11111110000
Q ss_pred CCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 924 PDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 924 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+. ......+.++.+++.+||+.||++|||++||
T Consensus 270 ~~------------------------------~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el 302 (311)
T 3p1a_A 270 PP------------------------------EFTAGLSSELRSVLVMMLEPDPKLRATAEAL 302 (311)
T ss_dssp CH------------------------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred Cc------------------------------ccccCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 00 0111234568899999999999999998764
No 133
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=366.04 Aligned_cols=208 Identities=23% Similarity=0.308 Sum_probs=179.2
Q ss_pred HHHHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---chhHHHHHHHHHHHhcCCCCcceeeeeeccccc
Q 046598 682 NLYNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVD 758 (986)
Q Consensus 682 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 758 (986)
+.....++|++.+.||+|+||+||+|+++.+++.||||+++... ....+.+.+|..++..++||||++++++
T Consensus 55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~----- 129 (412)
T 2vd5_A 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFA----- 129 (412)
T ss_dssp HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEE-----
T ss_pred hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEE-----
Confidence 33345688999999999999999999999899999999997422 2234568899999999999999999998
Q ss_pred cCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecC
Q 046598 759 YQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDE 838 (986)
Q Consensus 759 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 838 (986)
+.+++..|+||||+++|+|.+++.. ....+++..++.++.||+.||+|||+. +|+||||||+||+++.
T Consensus 130 ~~~~~~~~lVmE~~~gg~L~~~l~~---------~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~ 197 (412)
T 2vd5_A 130 FQDENYLYLVMEYYVGGDLLTLLSK---------FGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDR 197 (412)
T ss_dssp EECSSEEEEEECCCCSCBHHHHHHH---------HSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECT
T ss_pred EeeCCEEEEEEcCCCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecC
Confidence 4566889999999999999999962 223689999999999999999999999 9999999999999999
Q ss_pred CCcEEEcccccceecCCCCCcccccccccccccccccccc-------CCCcCcccchhhHHHHHHHHHhCCCCCCc
Q 046598 839 DMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGL-------GSEVSISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 839 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
++++||+|||+++....... ......+||+.|+|||++. +..++.++|||||||++|||++|+.||..
T Consensus 198 ~g~vkL~DFGla~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~ 272 (412)
T 2vd5_A 198 CGHIRLADFGSCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA 272 (412)
T ss_dssp TSCEEECCCTTCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred CCCEEEeechhheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCC
Confidence 99999999999987653322 2223457999999999987 45789999999999999999999999963
No 134
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-39 Score=361.23 Aligned_cols=262 Identities=26% Similarity=0.414 Sum_probs=201.9
Q ss_pred HhhcCCCCCcccccccceeEEEEEECC-----CCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccc
Q 046598 685 NATDRFSSVNQIGEGSFGSVFKGILDD-----GRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVD 758 (986)
Q Consensus 685 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 758 (986)
...++|++.+.||+|+||.||+|++.. +++.||||+++... ....+.+.+|++++++++||||++++++|
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~---- 119 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC---- 119 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE----
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE----
Confidence 346789999999999999999999973 45899999997543 33457799999999999999999999994
Q ss_pred cCCCceEEEEEEeccCCCHhHhhccCCCCC--------------ccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 046598 759 YQGNDFKALVFEFMHNRSLEEWLHPITRED--------------ETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPI 824 (986)
Q Consensus 759 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i 824 (986)
..++..++||||+++|+|.+++....... ........+++.+++.++.||++||+|||++ +|
T Consensus 120 -~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~i 195 (343)
T 1luf_A 120 -AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KF 195 (343)
T ss_dssp -CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred -ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 44578899999999999999997532110 0001125799999999999999999999999 99
Q ss_pred EeecCCCCCeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCC
Q 046598 825 AHCDLKPSNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKK 903 (986)
Q Consensus 825 vH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~ 903 (986)
+||||||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.
T Consensus 196 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 275 (343)
T 1luf_A 196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 275 (343)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999986643332233344568899999999998899999999999999999999 999
Q ss_pred CCCccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCC
Q 046598 904 PTDIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSM 983 (986)
Q Consensus 904 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 983 (986)
||..... ...... +.+......+ ..++.++.+++.+||+.||++|||+
T Consensus 276 p~~~~~~-----~~~~~~--------~~~~~~~~~~-------------------~~~~~~l~~li~~~l~~~p~~Rps~ 323 (343)
T 1luf_A 276 PYYGMAH-----EEVIYY--------VRDGNILACP-------------------ENCPLELYNLMRLCWSKLPADRPSF 323 (343)
T ss_dssp TTTTSCH-----HHHHHH--------HHTTCCCCCC-------------------TTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred cCCCCCh-----HHHHHH--------HhCCCcCCCC-------------------CCCCHHHHHHHHHHcccCcccCCCH
Confidence 9863211 111110 0000000000 1234467899999999999999998
Q ss_pred CCC
Q 046598 984 TNV 986 (986)
Q Consensus 984 ~eV 986 (986)
+||
T Consensus 324 ~~~ 326 (343)
T 1luf_A 324 CSI 326 (343)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 135
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=4.8e-39 Score=362.02 Aligned_cols=286 Identities=19% Similarity=0.243 Sum_probs=205.5
Q ss_pred HHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 684 YNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 684 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
....++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++........
T Consensus 23 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 102 (364)
T 3qyz_A 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102 (364)
T ss_dssp CCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTC
T ss_pred ccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcccc
Confidence 344678999999999999999999999999999999997533 3344778999999999999999999999765544555
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
...++||||++ ++|.+++.. ..+++.+++.|+.||+.||+|||+. ||+||||||+||+++.++.+
T Consensus 103 ~~~~iv~e~~~-~~L~~~l~~-----------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~ 167 (364)
T 3qyz_A 103 KDVYIVQDLME-TDLYKLLKT-----------QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDL 167 (364)
T ss_dssp CCEEEEEECCS-EEHHHHHHH-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCE
T ss_pred ceEEEEEcccC-cCHHHHHHh-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCE
Confidence 67999999996 599998851 3589999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCc-cccccccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHH
Q 046598 843 HIGDFGLARFLPLSSAQ-TSSIGAKGSIGYIAPEYGLG-SEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~ 920 (986)
||+|||+++........ .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+ .......
T Consensus 168 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~ 246 (364)
T 3qyz_A 168 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILG 246 (364)
T ss_dssp EECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHH
T ss_pred EEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHH
Confidence 99999999876433221 11234579999999998655 458999999999999999999999997432221 1111111
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.......+.+................................++.+++.+|++.||++|||++|+
T Consensus 247 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 311 (364)
T 3qyz_A 247 -ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311 (364)
T ss_dssp -HHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred -HhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 11111111110000000000000000000000000011234567899999999999999998763
No 136
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.8e-38 Score=344.69 Aligned_cols=250 Identities=21% Similarity=0.287 Sum_probs=199.8
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|++++++++||||+++++++ ..+..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 79 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEESF 79 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEE-----EcCCE
Confidence 57899999999999999999999999999999999753 233456788999999999999999999994 55678
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc---
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI--- 841 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--- 841 (986)
.++||||+++++|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 80 ~~~v~e~~~~~~l~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~ 146 (284)
T 3kk8_A 80 HYLVFDLVTGGELFEDIV----------AREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAA 146 (284)
T ss_dssp EEEEECCCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCC
T ss_pred EEEEEecCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCc
Confidence 899999999999999884 224689999999999999999999999 9999999999999986665
Q ss_pred EEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHh
Q 046598 842 AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLART 921 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 921 (986)
+||+|||.+....... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||...... ........
T Consensus 147 ~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~ 221 (284)
T 3kk8_A 147 VKLADFGLAIEVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIKA 221 (284)
T ss_dssp EEECCCTTCEECCSSC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHH
T ss_pred EEEeeceeeEEcccCc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--HHHHHHHh
Confidence 9999999998764322 223456899999999999999999999999999999999999998632111 11111100
Q ss_pred hCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 922 ALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 922 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.. . ..+.. .....+.++.+++.+|++.||++|||++|+
T Consensus 222 ~~-----------~-~~~~~---------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~ 259 (284)
T 3kk8_A 222 GA-----------Y-DYPSP---------------EWDTVTPEAKSLIDSMLTVNPKKRITADQA 259 (284)
T ss_dssp TC-----------C-CCCTT---------------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred cc-----------c-cCCch---------------hhcccCHHHHHHHHHHcccChhhCCCHHHH
Confidence 00 0 00000 001223457799999999999999998763
No 137
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.8e-39 Score=345.53 Aligned_cols=248 Identities=24% Similarity=0.363 Sum_probs=179.6
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
.++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++ .+.+
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 84 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYF-----EDSN 84 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEE-----ECSS
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEE-----ccCC
Confidence 467999999999999999999998889999999996432 22346789999999999999999999994 4567
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..++||||+++++|.+++.. ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~k 152 (278)
T 3cok_A 85 YVYLVLEMCHNGEMNRYLKN---------RVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIK 152 (278)
T ss_dssp EEEEEEECCTTEEHHHHHHT---------CSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEE
T ss_pred eEEEEEecCCCCcHHHHHhh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEE
Confidence 89999999999999999962 234689999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhC
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTAL 923 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 923 (986)
|+|||.+........ ......|++.|+|||++.+..++.++||||||+++|||++|+.||....... ...
T Consensus 153 l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~--- 222 (278)
T 3cok_A 153 IADFGLATQLKMPHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-----TLN--- 222 (278)
T ss_dssp ECCCTTCEECC------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------
T ss_pred EEeecceeeccCCCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-----HHH---
Confidence 999999987643222 2223568999999999999999999999999999999999999996422110 000
Q ss_pred CCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 924 PDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 924 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.....+... +...+.++.+++.+||+.||++|||++||
T Consensus 223 ---------~~~~~~~~~----------------~~~~~~~~~~li~~~l~~dp~~Rps~~~~ 260 (278)
T 3cok_A 223 ---------KVVLADYEM----------------PSFLSIEAKDLIHQLLRRNPADRLSLSSV 260 (278)
T ss_dssp ----------CCSSCCCC----------------CTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred ---------HHhhcccCC----------------ccccCHHHHHHHHHHcccCHhhCCCHHHH
Confidence 000000000 00123457799999999999999998764
No 138
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.2e-39 Score=356.00 Aligned_cols=241 Identities=22% Similarity=0.349 Sum_probs=198.3
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc--------hhHHHHHHHHHHHhcCCCCcceeeeeecccc
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH--------GAFKSFIAECNTLKNIRHRNLVKILTACSGV 757 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 757 (986)
..++|++.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|++++++++||||++++++
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~---- 97 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDI---- 97 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEE----
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEE----
Confidence 45789999999999999999999999999999999975321 133467889999999999999999999
Q ss_pred ccCCCceEEEEEEeccCC-CHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEe
Q 046598 758 DYQGNDFKALVFEFMHNR-SLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILL 836 (986)
Q Consensus 758 ~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 836 (986)
+...+..++||||+.+| +|.+++.. ...+++..++.|+.||+.||+|||+. +|+||||||+||++
T Consensus 98 -~~~~~~~~lv~e~~~~g~~l~~~~~~----------~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll 163 (335)
T 3dls_A 98 -FENQGFFQLVMEKHGSGLDLFAFIDR----------HPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVI 163 (335)
T ss_dssp -EECSSEEEEEEECCTTSCBHHHHHHT----------CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred -EeeCCEEEEEEEeCCCCccHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEE
Confidence 45668899999999777 99999952 34589999999999999999999999 99999999999999
Q ss_pred cCCCcEEEcccccceecCCCCCccccccccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCccccccccH
Q 046598 837 DEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEV-SISGDVYSYGILLLELITRKKPTDIMFEGDMNL 915 (986)
Q Consensus 837 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~ 915 (986)
+.++.+||+|||+++....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 164 ~~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---- 236 (335)
T 3dls_A 164 AEDFTIKLIDFGSAAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET---- 236 (335)
T ss_dssp CTTSCEEECCCTTCEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG----
T ss_pred cCCCcEEEeecccceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH----
Confidence 9999999999999987643322 234568999999999988877 88999999999999999999999632110
Q ss_pred HHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 916 HNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 916 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..... ..+. ..+.++.+++.+||+.||++|||++||
T Consensus 237 ---------------~~~~~-~~~~-------------------~~~~~l~~li~~~L~~dP~~Rps~~el 272 (335)
T 3dls_A 237 ---------------VEAAI-HPPY-------------------LVSKELMSLVSGLLQPVPERRTTLEKL 272 (335)
T ss_dssp ---------------TTTCC-CCSS-------------------CCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ---------------Hhhcc-CCCc-------------------ccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 00000 0000 123457799999999999999998764
No 139
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3e-39 Score=358.23 Aligned_cols=268 Identities=24% Similarity=0.318 Sum_probs=205.8
Q ss_pred hcCCCCCcccccccceeEEEEEE----CCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGIL----DDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
.++|++.+.||+|+||.||+|++ ..+++.||||++........+.+.+|++++++++||||+++++++. ..+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~---~~~~ 98 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSY---GPGR 98 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE---CSSS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEe---cCCC
Confidence 46899999999999999999994 5678999999998766666778999999999999999999999853 2355
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
...++||||+++++|.+++.. ....+++.+++.|+.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~ 166 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQR---------HRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHV 166 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHH---------HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred ceEEEEEeecCCCCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCE
Confidence 778999999999999999962 224589999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCc-cccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHh
Q 046598 843 HIGDFGLARFLPLSSAQ-TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLART 921 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 921 (986)
||+|||+++........ .......+|..|+|||++.+..++.++|||||||++|+|++|+.||....... .......
T Consensus 167 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~--~~~~~~~ 244 (327)
T 3lxl_A 167 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF--LRMMGCE 244 (327)
T ss_dssp EECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH--HHHCC--
T ss_pred EEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchh--hhhcccc
Confidence 99999999876543322 22334558888999999999999999999999999999999999986321110 0000000
Q ss_pred hCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 922 ALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 922 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..........+...... +......++.++.+++.+||+.||++|||++||
T Consensus 245 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el 294 (327)
T 3lxl_A 245 RDVPALSRLLELLEEGQ---------------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 294 (327)
T ss_dssp --CCHHHHHHHHHHTTC---------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cccccHHHHHHHhhccc---------------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHH
Confidence 00011111111111000 000112345668899999999999999998764
No 140
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.5e-38 Score=346.37 Aligned_cols=250 Identities=23% Similarity=0.332 Sum_probs=197.5
Q ss_pred cCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 688 DRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 688 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
+.|.+.+.||+|+||.||+|.+..++..||+|++... .....+.+.+|+.++++++||||+++++++... ...+...
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~ 104 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCI 104 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE-SSSCEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccc-cCCCceE
Confidence 4578888999999999999999999999999998743 334567789999999999999999999986543 3456778
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeecCCCCCeEec-CCCcE
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPP--IAHCDLKPSNILLD-EDMIA 842 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~ 842 (986)
++||||+++++|.+++.. ...+++..++.|+.||+.||+|||+. + |+||||||+||+++ .++.+
T Consensus 105 ~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~ 171 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKR----------FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSV 171 (290)
T ss_dssp EEEEECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCE
T ss_pred EEEEEecCCCCHHHHHHH----------ccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCE
Confidence 999999999999999952 24589999999999999999999998 7 99999999999997 78999
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
||+|||++...... ......|++.|+|||++.+ .++.++||||+||++|+|++|+.||...... .......
T Consensus 172 kl~Dfg~~~~~~~~----~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~~~ 242 (290)
T 1t4h_A 172 KIGDLGLATLKRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA----AQIYRRV 242 (290)
T ss_dssp EECCTTGGGGCCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH----HHHHHHH
T ss_pred EEeeCCCccccccc----ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcH----HHHHHHH
Confidence 99999999754322 2233568999999998874 5899999999999999999999999632221 1111111
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..... +.. .....+.++.+++.+||+.||++|||++||
T Consensus 243 ~~~~~-----------~~~---------------~~~~~~~~l~~li~~~l~~dp~~Rps~~el 280 (290)
T 1t4h_A 243 TSGVK-----------PAS---------------FDKVAIPEVKEIIEGCIRQNKDERYSIKDL 280 (290)
T ss_dssp TTTCC-----------CGG---------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred hccCC-----------ccc---------------cCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 10000 000 000112357899999999999999998764
No 141
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1e-38 Score=352.38 Aligned_cols=268 Identities=25% Similarity=0.274 Sum_probs=196.5
Q ss_pred hcCCCCC-cccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcC-CCCcceeeeeeccccccCCCce
Q 046598 687 TDRFSSV-NQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 687 ~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.++|++. +.||+|+||.||+|.+..+++.||||+++.......+.+.+|++++.++ +||||+++++++ .+++.
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~-----~~~~~ 85 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF-----EEEDR 85 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EETTE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEE-----eeCCE
Confidence 4678885 7899999999999999988999999999866555667899999999885 799999999994 45578
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc---
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI--- 841 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--- 841 (986)
.++||||+++++|.+++.. ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 86 ~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~ 152 (316)
T 2ac3_A 86 FYLVFEKMRGGSILSHIHK----------RRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSP 152 (316)
T ss_dssp EEEEEECCTTCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCS
T ss_pred EEEEEEcCCCCcHHHHHhc----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCc
Confidence 9999999999999999952 24689999999999999999999999 9999999999999998776
Q ss_pred EEEcccccceecCCCCC-----ccccccccccccccccccccC-----CCcCcccchhhHHHHHHHHHhCCCCCCccccc
Q 046598 842 AHIGDFGLARFLPLSSA-----QTSSIGAKGSIGYIAPEYGLG-----SEVSISGDVYSYGILLLELITRKKPTDIMFEG 911 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~ 911 (986)
+||+|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 153 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~ 232 (316)
T 2ac3_A 153 VKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGS 232 (316)
T ss_dssp EEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCS
T ss_pred eEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccc
Confidence 99999999976532211 112223458999999999875 56889999999999999999999999754332
Q ss_pred cccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 912 DMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+..+... ...+.....+.......... .+ .......+.++.+++.+||+.||++|||++|+
T Consensus 233 ~~~~~~~--~~~~~~~~~~~~~i~~~~~~---------~~---~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~ 293 (316)
T 2ac3_A 233 DCGWDRG--EACPACQNMLFESIQEGKYE---------FP---DKDWAHISCAAKDLISKLLVRDAKQRLSAAQV 293 (316)
T ss_dssp CSCC------CCHHHHHHHHHHHHHCCCC---------CC---HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred ccccccc--ccchhHHHHHHHHHhccCcc---------cC---chhcccCCHHHHHHHHHHhhCChhhCCCHHHH
Confidence 2111000 00000000111111000000 00 00011234568899999999999999998764
No 142
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.6e-39 Score=358.27 Aligned_cols=250 Identities=23% Similarity=0.353 Sum_probs=194.7
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeE----EEEEEeecc-CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTT----IAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 761 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 761 (986)
.++|++.+.||+|+||+||+|.+..+++. ||+|++... .....+.+.+|+.++++++||||++++++|.
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------ 85 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP------ 85 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC------
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc------
Confidence 35789999999999999999999776655 777776432 2333456788999999999999999999852
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI 841 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 841 (986)
+...++||||+++|+|.+++.. ....+++..++.|+.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 86 ~~~~~~v~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~ 153 (325)
T 3kex_A 86 GSSLQLVTQYLPLGSLLDHVRQ---------HRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQ 153 (325)
T ss_dssp BSSEEEEEECCTTCBSHHHHHS---------SGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSC
T ss_pred CCccEEEEEeCCCCCHHHHHHH---------ccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCe
Confidence 3568999999999999999962 234688899999999999999999999 9999999999999999999
Q ss_pred EEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHH
Q 046598 842 AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~ 920 (986)
+||+|||+++...............++..|+|||++.+..++.++|||||||++|||+| |+.||...... ...
T Consensus 154 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~---- 227 (325)
T 3kex_A 154 VQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVP---- 227 (325)
T ss_dssp EEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHH----
T ss_pred EEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHH----
Confidence 99999999988765544444455668889999999998999999999999999999999 99999743211 111
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+.+......... ..++.++.+++.+||+.||++|||++||
T Consensus 228 --------~~~~~~~~~~~~------------------~~~~~~~~~li~~~l~~dp~~Rps~~el 267 (325)
T 3kex_A 228 --------DLLEKGERLAQP------------------QICTIDVYMVMVKCWMIDENIRPTFKEL 267 (325)
T ss_dssp --------HHHHTTCBCCCC------------------TTBCTTTTHHHHHHTCSCTTTSCCHHHH
T ss_pred --------HHHHcCCCCCCC------------------CcCcHHHHHHHHHHcCCChhhCcCHHHH
Confidence 111110000000 0122346689999999999999998764
No 143
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.1e-39 Score=358.66 Aligned_cols=262 Identities=24% Similarity=0.343 Sum_probs=200.4
Q ss_pred hhcCCCCCcccccccceeEEEEEE-----CCCCeEEEEEEeecc-CchhHHHHHHHHHHHhcC-CCCcceeeeeeccccc
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGIL-----DDGRTTIAVKVFNLL-HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVD 758 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 758 (986)
..++|.+.+.||+|+||.||+|.+ ..+++.||||+++.. .....+.+.+|+++++++ +||||+++++++
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~---- 118 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC---- 118 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE----
Confidence 457899999999999999999997 335678999999743 233457899999999999 899999999994
Q ss_pred cCCCceEEEEEEeccCCCHhHhhccCCCCC-------------ccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 046598 759 YQGNDFKALVFEFMHNRSLEEWLHPITRED-------------ETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIA 825 (986)
Q Consensus 759 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-------------~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iv 825 (986)
..++..++||||+++|+|.+++....... ........+++.+++.++.||+.||+|||+. ||+
T Consensus 119 -~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iv 194 (344)
T 1rjb_A 119 -TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCV 194 (344)
T ss_dssp -CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred -eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 44577999999999999999997543210 0011124589999999999999999999999 999
Q ss_pred eecCCCCCeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCC
Q 046598 826 HCDLKPSNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKP 904 (986)
Q Consensus 826 H~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~p 904 (986)
||||||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||+| |+.|
T Consensus 195 H~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 274 (344)
T 1rjb_A 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274 (344)
T ss_dssp ETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999987654433333445567889999999998999999999999999999998 9999
Q ss_pred CCccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCC
Q 046598 905 TDIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMT 984 (986)
Q Consensus 905 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 984 (986)
|...... ......... ...... +..++.++.+++.+||+.||++|||++
T Consensus 275 ~~~~~~~-~~~~~~~~~------------~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ 323 (344)
T 1rjb_A 275 YPGIPVD-ANFYKLIQN------------GFKMDQ------------------PFYATEEIYIIMQSCWAFDSRKRPSFP 323 (344)
T ss_dssp STTCCCS-HHHHHHHHT------------TCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cccCCcH-HHHHHHHhc------------CCCCCC------------------CCCCCHHHHHHHHHHcCCCchhCcCHH
Confidence 9643221 111111111 110000 002244678999999999999999987
Q ss_pred CC
Q 046598 985 NV 986 (986)
Q Consensus 985 eV 986 (986)
||
T Consensus 324 ~l 325 (344)
T 1rjb_A 324 NL 325 (344)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 144
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.6e-38 Score=359.43 Aligned_cols=253 Identities=20% Similarity=0.227 Sum_probs=190.4
Q ss_pred hcCCCCC-cccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhc-CCCCcceeeeeeccccccCCCce
Q 046598 687 TDRFSSV-NQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKN-IRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 687 ~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.++|.+. +.||+|+||+||+|.+..+++.||||+++.. ..+.+|++++.+ .+||||+++++++... +.++..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~-~~~~~~ 133 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC 133 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeec-ccCCcE
Confidence 4567776 6899999999999999999999999998632 456788888744 5899999999986432 344677
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecC---CCc
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDE---DMI 841 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~ 841 (986)
.|+||||+++|+|.+++.... ...+++.+++.|+.||+.||+|||+. +|+||||||+||+++. ++.
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~ 202 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDRG--------DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAI 202 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC-----------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCC
T ss_pred EEEEEEeCCCCcHHHHHHHhC--------CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCcc
Confidence 899999999999999996321 23589999999999999999999999 9999999999999997 789
Q ss_pred EEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCcccccccc--HHHHH
Q 046598 842 AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMN--LHNLA 919 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~--~~~~~ 919 (986)
+||+|||+++..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....
T Consensus 203 ~kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i 279 (400)
T 1nxk_A 203 LKLTDFGFAKETTSH---NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 279 (400)
T ss_dssp EEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHH
T ss_pred EEEEecccccccCCC---CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHH
Confidence 999999999865422 2233467899999999999999999999999999999999999999743222110 11111
Q ss_pred HhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 920 RTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 920 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. ..... .+. .....++.++.+++.+||+.||++|||++||
T Consensus 280 ~-----------~~~~~-~~~---------------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ei 319 (400)
T 1nxk_A 280 R-----------MGQYE-FPN---------------PEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 319 (400)
T ss_dssp H-----------HTCCC-CCT---------------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred H-----------cCccc-CCC---------------cccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 0 00000 000 0001234567899999999999999998764
No 145
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.1e-38 Score=344.60 Aligned_cols=245 Identities=24% Similarity=0.329 Sum_probs=176.3
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc---CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
.++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|+++++.++||||+++++++ ...+
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 86 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI-----KSKD 86 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEE-----ecCC
Confidence 36899999999999999999999988999999998643 223356789999999999999999999994 4567
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..++||||+ ++++.+++.. ...+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+|
T Consensus 87 ~~~lv~e~~-~~~l~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~k 152 (275)
T 2eue_A 87 EIIMVIEYA-GNELFDYIVQ----------RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVK 152 (275)
T ss_dssp CEEEEEECC-CEEHHHHHHT----------SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEE
T ss_pred eEEEEehhc-CCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEE
Confidence 899999999 7788888742 24589999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEV-SISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
|+|||.++...... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... .....
T Consensus 153 l~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~-- 222 (275)
T 2eue_A 153 IADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-----PVLFK-- 222 (275)
T ss_dssp ECCSSCC------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH--
T ss_pred EeecccceeccCcc---cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-----HHHHH--
Confidence 99999997654322 2233568999999999988765 7899999999999999999999963211 11110
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+.. .....+ ...+..+.+++.+|++.||++|||++|+
T Consensus 223 ------~~~~-~~~~~~-------------------~~~~~~~~~li~~~l~~dP~~Rps~~e~ 260 (275)
T 2eue_A 223 ------NISN-GVYTLP-------------------KFLSPGAAGLIKRMLIVNPLNRISIHEI 260 (275)
T ss_dssp ------HHHH-TCCCCC-------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred ------HHHh-CCCCCC-------------------ccCCHHHHHHHHHHhhcCHhHCCCHHHH
Confidence 0000 000000 0123457789999999999999998764
No 146
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.3e-38 Score=353.82 Aligned_cols=276 Identities=23% Similarity=0.330 Sum_probs=199.0
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc--hhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH--GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|++++++++||||++++++| .....
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~ 98 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVC-----KKKKR 98 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEe-----ecCCE
Confidence 4689999999999999999999999899999999864332 2345678999999999999999999995 45578
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHI 844 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 844 (986)
.++||||+++++|.++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 99 ~~lv~e~~~~~~l~~~~~----------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl 165 (331)
T 4aaa_A 99 WYLVFEFVDHTILDDLEL----------FPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKL 165 (331)
T ss_dssp EEEEEECCSEEHHHHHHH----------STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEE
T ss_pred EEEEEecCCcchHHHHHh----------hccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEE
Confidence 999999999999998864 234589999999999999999999999 9999999999999999999999
Q ss_pred cccccceecCCCCCccccccccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHh--
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGS-EVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLART-- 921 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~-- 921 (986)
+|||.++...... .......|++.|+|||++.+. .++.++||||+||++|+|++|+.||......+. .......
T Consensus 166 ~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~ 242 (331)
T 4aaa_A 166 CDFGFARTLAAPG--EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ-LYHIMMCLG 242 (331)
T ss_dssp CCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHC
T ss_pred EeCCCceeecCCc--cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhC
Confidence 9999997654322 222345689999999998875 789999999999999999999999974322211 1111111
Q ss_pred hCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 922 ALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 922 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.......+.+...-....... ... .............+.++.+++.+||+.||++|||++||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el 304 (331)
T 4aaa_A 243 NLIPRHQELFNKNPVFAGVRL-PEI--KEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAEL 304 (331)
T ss_dssp SCCHHHHHHHHHCGGGTTCCC-CCC--SSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGG
T ss_pred CCChhhhhHhhhccccccccC-ccc--cccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHH
Confidence 011111111111000000000 000 00000011111345678899999999999999999875
No 147
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=4e-38 Score=367.03 Aligned_cols=253 Identities=24% Similarity=0.354 Sum_probs=202.6
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
.++|.+.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|++++++++||||++++++ +....
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~-----~~~~~ 258 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYA-----FETKT 258 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEE-----EECSS
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEE-----EeeCC
Confidence 367999999999999999999999889999999996432 2335678899999999999999999998 45668
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..|+||||++||+|.+++.... .....+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 259 ~l~lVmE~~~gg~L~~~l~~~~------~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vk 329 (543)
T 3c4z_A 259 DLCLVMTIMNGGDIRYHIYNVD------EDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVR 329 (543)
T ss_dssp EEEEEECCCTTCBHHHHHHTSS------TTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEE
T ss_pred EEEEEEEeccCCCHHHHHHHhh------cccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEE
Confidence 8999999999999999986432 1234689999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhC
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTAL 923 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 923 (986)
|+|||+++.+..... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........
T Consensus 330 L~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~-- 404 (543)
T 3c4z_A 330 ISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQR-- 404 (543)
T ss_dssp ECCCTTCEECCTTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHH--
T ss_pred EeecceeeeccCCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHH--
Confidence 999999987643322 2234579999999999999999999999999999999999999997432211 11111110
Q ss_pred CCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCC
Q 046598 924 PDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMT 984 (986)
Q Consensus 924 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 984 (986)
+..... ..+ ...+.++.+++.+||+.||++||++.
T Consensus 405 ------i~~~~~-~~p-------------------~~~s~~~~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 405 ------VLEQAV-TYP-------------------DKFSPASKDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp ------HHHCCC-CCC-------------------TTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred ------Hhhccc-CCC-------------------cccCHHHHHHHHHhccCCHhHCCCCc
Confidence 111000 000 12244577899999999999999874
No 148
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=361.49 Aligned_cols=260 Identities=24% Similarity=0.375 Sum_probs=203.9
Q ss_pred hcCCCCCcccccccceeEEEEEECC-------CCeEEEEEEeeccC-chhHHHHHHHHHHHhcC-CCCcceeeeeecccc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDD-------GRTTIAVKVFNLLH-HGAFKSFIAECNTLKNI-RHRNLVKILTACSGV 757 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 757 (986)
.++|.+.+.||+|+||.||+|++.. .+..||||+++... ....+++.+|+++++++ +||||++++++|
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~--- 144 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC--- 144 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee---
Confidence 4689999999999999999999743 34689999997543 33457789999999999 999999999994
Q ss_pred ccCCCceEEEEEEeccCCCHhHhhccCCCCC------ccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCC
Q 046598 758 DYQGNDFKALVFEFMHNRSLEEWLHPITRED------ETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKP 831 (986)
Q Consensus 758 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 831 (986)
..++..++||||+++|+|.+++....... ........+++.+++.|+.||+.||+|||+. +|+||||||
T Consensus 145 --~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 219 (382)
T 3tt0_A 145 --TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 219 (382)
T ss_dssp --CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred --ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCc
Confidence 45577899999999999999997543210 0112235699999999999999999999999 999999999
Q ss_pred CCeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCcccc
Q 046598 832 SNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFE 910 (986)
Q Consensus 832 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~ 910 (986)
+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 220 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~ 299 (382)
T 3tt0_A 220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 299 (382)
T ss_dssp GGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred ceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987654443344445567889999999999999999999999999999999 9999863211
Q ss_pred ccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 911 GDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..... .+........ ...++.++.+++.+||+.||++|||++||
T Consensus 300 -----~~~~~---------~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dP~~Rps~~el 343 (382)
T 3tt0_A 300 -----EELFK---------LLKEGHRMDK------------------PSNCTNELYMMMRDCWHAVPSQRPTFKQL 343 (382)
T ss_dssp -----HHHHH---------HHHTTCCCCC------------------CSSCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -----HHHHH---------HHHcCCCCCC------------------CccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 11111 1111000000 01234567899999999999999998764
No 149
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=356.12 Aligned_cols=263 Identities=17% Similarity=0.218 Sum_probs=194.7
Q ss_pred hcCCCCCcccccccceeEEEEEECC---CCeEEEEEEeeccCch-----------hHHHHHHHHHHHhcCCCCcceeeee
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDD---GRTTIAVKVFNLLHHG-----------AFKSFIAECNTLKNIRHRNLVKILT 752 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~ 752 (986)
.++|.+.+.||+|+||.||+|.+.. ++..||||+....... ..+.+.+|+.+++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 4689999999999999999999986 6889999998754321 1234667888999999999999999
Q ss_pred eccccccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCC
Q 046598 753 ACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPS 832 (986)
Q Consensus 753 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~ 832 (986)
++... +......++||||+ +++|.+++.. .+.+++.+++.|+.||+.||+|||+. +|+||||||+
T Consensus 116 ~~~~~-~~~~~~~~lv~e~~-~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~ 180 (345)
T 2v62_A 116 SGLTE-FKGRSYRFMVMERL-GIDLQKISGQ----------NGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAA 180 (345)
T ss_dssp EEEEE-SSSCEEEEEEEECE-EEEHHHHCBG----------GGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred ccccc-cCCCcEEEEEEecc-CCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHH
Confidence 96543 34468899999999 9999999952 23689999999999999999999999 9999999999
Q ss_pred CeEecCCC--cEEEcccccceecCCCCC-----ccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCC
Q 046598 833 NILLDEDM--IAHIGDFGLARFLPLSSA-----QTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPT 905 (986)
Q Consensus 833 NIll~~~~--~~kL~DFG~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf 905 (986)
||+++.++ .+||+|||+++.+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 181 NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf 260 (345)
T 2v62_A 181 NLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPW 260 (345)
T ss_dssp GEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred HEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999887 999999999987643211 11123457999999999999999999999999999999999999999
Q ss_pred CccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCC
Q 046598 906 DIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTN 985 (986)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~e 985 (986)
................. .....+.+..... ....+.++.+++.+||+.||++|||++|
T Consensus 261 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ 318 (345)
T 2v62_A 261 EQNLKDPVAVQTAKTNL-LDELPQSVLKWAP---------------------SGSSCCEIAQFLVCAHSLAYDEKPNYQA 318 (345)
T ss_dssp GGGTTCHHHHHHHHHHH-HHTTTHHHHHHSC---------------------TTSCCHHHHHHHHHHHTCCTTCCCCHHH
T ss_pred cccccccHHHHHHHHhh-cccccHHHHhhcc---------------------ccccHHHHHHHHHHHhhcCcccCCCHHH
Confidence 63322211111111100 0000000000000 0023456889999999999999999876
Q ss_pred C
Q 046598 986 V 986 (986)
Q Consensus 986 V 986 (986)
|
T Consensus 319 l 319 (345)
T 2v62_A 319 L 319 (345)
T ss_dssp H
T ss_pred H
Confidence 4
No 150
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.5e-39 Score=359.09 Aligned_cols=249 Identities=23% Similarity=0.370 Sum_probs=189.1
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcCCC--CcceeeeeeccccccCCC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIRH--RNLVKILTACSGVDYQGN 762 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~~ 762 (986)
.++|++.+.||+|+||.||+|.+.. ++.||||++... .....+.+.+|+.++++++| |||+++++++ ..+
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~-----~~~ 81 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-----ITD 81 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTT-SCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECS
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCC-CCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeE-----eeC
Confidence 4679999999999999999999865 889999998743 23345778999999999976 9999999994 456
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
...++|||+ .+++|.+++.. ...+++.++..|+.||+.||+|||+. +|+||||||+||+++ ++.+
T Consensus 82 ~~~~lv~e~-~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~ 146 (343)
T 3dbq_A 82 QYIYMVMEC-GNIDLNSWLKK----------KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGML 146 (343)
T ss_dssp SEEEEEECC-CSEEHHHHHHH----------SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEE
T ss_pred CEEEEEEeC-CCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcE
Confidence 789999995 58899999952 34689999999999999999999999 999999999999997 6789
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccC-----------CCcCcccchhhHHHHHHHHHhCCCCCCccccc
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG-----------SEVSISGDVYSYGILLLELITRKKPTDIMFEG 911 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~ 911 (986)
||+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 147 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~ 226 (343)
T 3dbq_A 147 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 226 (343)
T ss_dssp EECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH
T ss_pred EEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH
Confidence 9999999987654433333445679999999999864 67899999999999999999999999643221
Q ss_pred cccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 912 DMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
... ....++........+ ..+.++.+++.+||+.||++|||++||
T Consensus 227 ~~~------------~~~~~~~~~~~~~~~------------------~~~~~l~~li~~~L~~dp~~Rpt~~e~ 271 (343)
T 3dbq_A 227 ISK------------LHAIIDPNHEIEFPD------------------IPEKDLQDVLKCCLKRDPKQRISIPEL 271 (343)
T ss_dssp HHH------------HHHHHCTTSCCCCCC------------------CSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHH------------HHHHhcCCcccCCcc------------------cCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 111 111111111111000 112356789999999999999998764
No 151
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.1e-38 Score=346.02 Aligned_cols=249 Identities=24% Similarity=0.384 Sum_probs=196.0
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
..++|++.+.||+|+||.||+|.+.. +..||+|+++.... ..+++.+|++++++++||||+++++++ ..+...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~ 94 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVC-----TKQRPI 94 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETT-TEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSE
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcC-CCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEE-----ecCCCe
Confidence 35689999999999999999999875 77899999975433 347789999999999999999999994 556789
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEc
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIG 845 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 845 (986)
++||||+++++|.+++.. ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 95 ~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~ 162 (283)
T 3gen_A 95 FIITEYMANGCLLNYLRE---------MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVS 162 (283)
T ss_dssp EEEECCCTTCBHHHHHHC---------GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEEC
T ss_pred EEEEeccCCCcHHHHHHH---------hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEc
Confidence 999999999999999962 234589999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCC
Q 046598 846 DFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLARTALP 924 (986)
Q Consensus 846 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 924 (986)
|||.++...... ........+|+.|+|||++.+..++.++||||+|+++|||+| |+.||...... ....
T Consensus 163 Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-----~~~~---- 232 (283)
T 3gen_A 163 DFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-----ETAE---- 232 (283)
T ss_dssp STTGGGGBCCHH-HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHH----
T ss_pred cccccccccccc-cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-----HHHH----
Confidence 999998654221 222333456788999999998899999999999999999998 99998642211 1110
Q ss_pred CchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 925 DHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 925 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+......... ...+..+.+++.+||+.||++|||++||
T Consensus 233 -----~~~~~~~~~~~------------------~~~~~~l~~li~~~l~~~p~~Rps~~~l 271 (283)
T 3gen_A 233 -----HIAQGLRLYRP------------------HLASEKVYTIMYSCWHEKADERPTFKIL 271 (283)
T ss_dssp -----HHHTTCCCCCC------------------TTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred -----HHhcccCCCCC------------------CcCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 00000000000 0113457799999999999999998764
No 152
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.1e-38 Score=362.71 Aligned_cols=252 Identities=19% Similarity=0.259 Sum_probs=190.9
Q ss_pred HhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC--------chhHHHHHHHHHHHhcCCCCcceeeeeeccc
Q 046598 685 NATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH--------HGAFKSFIAECNTLKNIRHRNLVKILTACSG 756 (986)
Q Consensus 685 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 756 (986)
...++|.+.+.||+|+||+||+|.+..+++.||||++.... ......+.+|++++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 45678999999999999999999999999999999987432 112235789999999999999999999842
Q ss_pred cccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEe
Q 046598 757 VDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILL 836 (986)
Q Consensus 757 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 836 (986)
.+..++||||+++|+|.+++. ....+++.+++.++.|++.||+|||++ +|+||||||+||++
T Consensus 211 -----~~~~~lv~e~~~~g~L~~~l~----------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll 272 (419)
T 3i6u_A 211 -----AEDYYIVLELMEGGELFDKVV----------GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLL 272 (419)
T ss_dssp -----SSEEEEEEECCTTCBGGGGTS----------SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred -----cCceEEEEEcCCCCcHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEE
Confidence 245799999999999999884 234689999999999999999999999 99999999999999
Q ss_pred cCCC---cEEEcccccceecCCCCCccccccccccccccccccccC---CCcCcccchhhHHHHHHHHHhCCCCCCcccc
Q 046598 837 DEDM---IAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG---SEVSISGDVYSYGILLLELITRKKPTDIMFE 910 (986)
Q Consensus 837 ~~~~---~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlGvvl~elltg~~pf~~~~~ 910 (986)
+.++ .+||+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.....
T Consensus 273 ~~~~~~~~~kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~ 349 (419)
T 3i6u_A 273 SSQEEDCLIKITDFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 349 (419)
T ss_dssp SSSSSSCCEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS
T ss_pred ecCCCcceEEEeecccceecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc
Confidence 7544 5999999999875422 22334679999999999863 6788999999999999999999999974322
Q ss_pred ccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 911 GDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.. ............... ......+.++.+++.+||+.||++|||++|+
T Consensus 350 ~~-~~~~~i~~~~~~~~~---------------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~ 397 (419)
T 3i6u_A 350 QV-SLKDQITSGKYNFIP---------------------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEA 397 (419)
T ss_dssp SC-CHHHHHHTTCCCCCH---------------------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred hH-HHHHHHhcCCCCCCc---------------------------hhhcccCHHHHHHHHHHccCChhHCcCHHHH
Confidence 21 111111111100000 0111234567899999999999999998763
No 153
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.1e-38 Score=350.88 Aligned_cols=245 Identities=22% Similarity=0.242 Sum_probs=187.5
Q ss_pred hcCCCCCcccccccceeEEEEEEC---CCCeEEEEEEeeccC----chhHHHHHHHHHHHhcCCCCcceeeeeecccccc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILD---DGRTTIAVKVFNLLH----HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 759 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 759 (986)
.++|++.+.||+|+||.||+|++. .+++.||+|+++... ......+.+|++++++++||||++++++ +
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~-----~ 90 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYA-----F 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEE-----E
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEE-----E
Confidence 468999999999999999999985 568999999997532 2334567899999999999999999998 4
Q ss_pred CCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCC
Q 046598 760 QGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDED 839 (986)
Q Consensus 760 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 839 (986)
..++..|+||||+++++|.+++.. .+.+++.+++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~ 157 (327)
T 3a62_A 91 QTGGKLYLILEYLSGGELFMQLER----------EGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQ 157 (327)
T ss_dssp ECSSCEEEEEECCTTEEHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTT
T ss_pred EcCCEEEEEEeCCCCCcHHHHHHh----------CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCC
Confidence 556789999999999999999952 24588999999999999999999999 99999999999999999
Q ss_pred CcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHH
Q 046598 840 MIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLA 919 (986)
Q Consensus 840 ~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~ 919 (986)
+.+||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....
T Consensus 158 ~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~ 230 (327)
T 3a62_A 158 GHVKLTDFGLCKESIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR-----KKTI 230 (327)
T ss_dssp SCEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHH
T ss_pred CcEEEEeCCcccccccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH-----HHHH
Confidence 999999999997543221 223345689999999999999999999999999999999999999963211 1111
Q ss_pred HhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCC
Q 046598 920 RTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMT 984 (986)
Q Consensus 920 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 984 (986)
. .+...... .+ ...+.++.+++.+||+.||++||++.
T Consensus 231 ~--------~i~~~~~~-~p-------------------~~~~~~~~~li~~~L~~dp~~R~~~~ 267 (327)
T 3a62_A 231 D--------KILKCKLN-LP-------------------PYLTQEARDLLKKLLKRNAASRLGAG 267 (327)
T ss_dssp H--------HHHHTCCC-CC-------------------TTSCHHHHHHHHHHSCSCGGGSTTSS
T ss_pred H--------HHHhCCCC-CC-------------------CCCCHHHHHHHHHHHhcCHhhccCCC
Confidence 0 11111000 00 01234577899999999999999654
No 154
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=9e-39 Score=352.33 Aligned_cols=262 Identities=26% Similarity=0.354 Sum_probs=204.2
Q ss_pred hhcCCCCCcccccccceeEEEEEE-----CCCCeEEEEEEeeccCc-hhHHHHHHHHHHHhcC-CCCcceeeeeeccccc
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGIL-----DDGRTTIAVKVFNLLHH-GAFKSFIAECNTLKNI-RHRNLVKILTACSGVD 758 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 758 (986)
..++|++.+.||+|+||.||+|.+ ..+++.||||+++.... ...+.+.+|+++++++ +||||+++++++
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~---- 96 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC---- 96 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEE----
Confidence 356899999999999999999995 45678999999975433 3457899999999999 999999999994
Q ss_pred cCCCceEEEEEEeccCCCHhHhhccCCCCC--------ccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCC
Q 046598 759 YQGNDFKALVFEFMHNRSLEEWLHPITRED--------ETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLK 830 (986)
Q Consensus 759 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlk 830 (986)
..++..++||||+++|+|.+++....... ........+++.+++.++.||+.||+|||++ +|+|||||
T Consensus 97 -~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlk 172 (313)
T 1t46_A 97 -TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 172 (313)
T ss_dssp -CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred -ecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCc
Confidence 45577899999999999999997543210 0012234589999999999999999999999 99999999
Q ss_pred CCCeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccc
Q 046598 831 PSNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMF 909 (986)
Q Consensus 831 p~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~ 909 (986)
|+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus 173 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 252 (313)
T 1t46_A 173 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP 252 (313)
T ss_dssp GGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred cceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence 9999999999999999999987755444333444567889999999999999999999999999999999 999986432
Q ss_pred cccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 910 EGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
... ..... +........ ....+.++.+++.+||+.||++|||++||
T Consensus 253 ~~~-~~~~~------------~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~el 298 (313)
T 1t46_A 253 VDS-KFYKM------------IKEGFRMLS------------------PEHAPAEMYDIMKTCWDADPLKRPTFKQI 298 (313)
T ss_dssp SSH-HHHHH------------HHHTCCCCC------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred chh-HHHHH------------hccCCCCCC------------------cccCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 211 11111 111110000 01224567899999999999999998764
No 155
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.5e-38 Score=350.49 Aligned_cols=263 Identities=24% Similarity=0.386 Sum_probs=191.7
Q ss_pred HhhcCCCCCcccccccceeEEEEEECC---CCeEEEEEEeecc--CchhHHHHHHHHHHHhcCCCCcceeeeeecccccc
Q 046598 685 NATDRFSSVNQIGEGSFGSVFKGILDD---GRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 759 (986)
Q Consensus 685 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 759 (986)
...++|.+.+.||+|+||.||+|.+.. +++.||+|+++.. .....+.+.+|++++++++||||+++++++.....
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 356789999999999999999998754 4568999998743 23445778999999999999999999999754322
Q ss_pred CCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCC
Q 046598 760 QGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDED 839 (986)
Q Consensus 760 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 839 (986)
......++||||+++++|.+++...... .....+++.+++.++.||+.||.|||+. +|+||||||+||+++.+
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~----~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLE----TGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDD 183 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBT----TSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTT
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhh----cCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCC
Confidence 3334579999999999999998533221 2345699999999999999999999999 99999999999999999
Q ss_pred CcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHH
Q 046598 840 MIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNL 918 (986)
Q Consensus 840 ~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~ 918 (986)
+.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|+|++ |..||...... .....
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~ 261 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--EMYDY 261 (313)
T ss_dssp SCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHH
T ss_pred CcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHHH
Confidence 9999999999987644333333344557889999999999999999999999999999999 88998643221 11111
Q ss_pred HHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 919 ARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 919 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.... .....+ ..++.++.+++.+||+.||++|||++||
T Consensus 262 ~~~~-----------~~~~~~-------------------~~~~~~l~~li~~~l~~dp~~Rps~~~l 299 (313)
T 3brb_A 262 LLHG-----------HRLKQP-------------------EDCLDELYEIMYSCWRTDPLDRPTFSVL 299 (313)
T ss_dssp HHTT-----------CCCCCB-------------------TTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred HHcC-----------CCCCCC-------------------ccccHHHHHHHHHHcCCChhhCcCHHHH
Confidence 1000 000000 1233467899999999999999998764
No 156
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1e-38 Score=373.01 Aligned_cols=250 Identities=26% Similarity=0.438 Sum_probs=202.5
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
.++|++.+.||+|+||.||+|.+..++..||||+++... ...+++.+|++++++++||||++++++| ..+...+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~-----~~~~~~~ 292 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREPPFY 292 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSCE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEE-----ecCCcEE
Confidence 457889999999999999999999888999999997543 3467899999999999999999999995 4457789
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEcc
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIGD 846 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 846 (986)
+||||+++|+|.++++... ...+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 293 lv~E~~~~g~L~~~l~~~~--------~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~D 361 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRECN--------RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVAD 361 (495)
T ss_dssp EEEECCTTCBHHHHHHHSC--------TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECC
T ss_pred EEEEccCCCCHHHHHHhcC--------cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEee
Confidence 9999999999999996322 23589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCC
Q 046598 847 FGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLARTALPD 925 (986)
Q Consensus 847 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 925 (986)
||+++...... ........++..|+|||++.+..++.++|||||||++|||+| |+.||...... .
T Consensus 362 FG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~----------- 427 (495)
T 1opk_A 362 FGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--Q----------- 427 (495)
T ss_dssp TTCEECCTTCC-EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--G-----------
T ss_pred cccceeccCCc-eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--H-----------
Confidence 99998764322 222334456789999999998999999999999999999999 99998643211 1
Q ss_pred chhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 926 HVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 926 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+.+.+....... .+..++.++.+++.+||+.||++|||++||
T Consensus 428 -~~~~~~~~~~~~------------------~~~~~~~~l~~li~~cl~~dP~~RPs~~el 469 (495)
T 1opk_A 428 -VYELLEKDYRME------------------RPEGCPEKVYELMRACWQWNPSDRPSFAEI 469 (495)
T ss_dssp -HHHHHHTTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -HHHHHHcCCCCC------------------CCCCCCHHHHHHHHHHcCcChhHCcCHHHH
Confidence 111111111000 011344568899999999999999998764
No 157
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.9e-38 Score=346.70 Aligned_cols=256 Identities=19% Similarity=0.278 Sum_probs=196.9
Q ss_pred HhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 685 NATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 685 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
...++|++.+.||+|+||.||+|++..+++.||||+...... .+.+.+|+++++.++|++++..+.+| ...+..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~----~~~~~~ 79 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWC----GAEGDY 79 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEE----EEETTE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeee----cCCCCc
Confidence 346789999999999999999999988899999998764322 24578899999999998888887775 345678
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEe---cCCCc
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILL---DEDMI 841 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~ 841 (986)
.++||||+ +++|.+++.. ....+++.+++.++.||+.||+|||++ +|+||||||+||++ +.++.
T Consensus 80 ~~lv~e~~-~~~L~~~~~~---------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~ 146 (296)
T 4hgt_A 80 NVMVMELL-GPSLEDLFNF---------CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNL 146 (296)
T ss_dssp EEEEEECC-CCBHHHHHHH---------TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTC
T ss_pred eEEEEEcc-CCCHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCe
Confidence 89999999 9999999962 234589999999999999999999999 99999999999999 78899
Q ss_pred EEEcccccceecCCCCCc-----cccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccc--c
Q 046598 842 AHIGDFGLARFLPLSSAQ-----TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDM--N 914 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~--~ 914 (986)
+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .
T Consensus 147 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 226 (296)
T 4hgt_A 147 VYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK 226 (296)
T ss_dssp EEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH
T ss_pred EEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhh
Confidence 999999999876443221 122345789999999999999999999999999999999999999975332211 1
Q ss_pred HHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 915 LHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 915 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.............. ......+.++.+++.+||+.||++|||++||
T Consensus 227 ~~~~~~~~~~~~~~---------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l 271 (296)
T 4hgt_A 227 YERISEKKMSTPIE---------------------------VLCKGYPSEFATYLNFCRSLRFDDKPDYSYL 271 (296)
T ss_dssp HHHHHHHHHHSCHH---------------------------HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHH
T ss_pred hhhhhcccccchhh---------------------------hhhccCCHHHHHHHHHHHhcCCCCCCCHHHH
Confidence 11111100000000 0001234568899999999999999998764
No 158
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=8.4e-39 Score=353.20 Aligned_cols=260 Identities=18% Similarity=0.205 Sum_probs=201.7
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
.++|++.+.||+|+||.||+|++..+++.||||++........+.+.+|+++++.++||||+++++++... .......+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRE-RGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEE-ETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEec-cCCCceeE
Confidence 46899999999999999999999888999999999776666778899999999999999999999986432 22446789
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEcc
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIGD 846 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 846 (986)
+||||+++|+|.+++.... .....+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 107 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~d 177 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLK------DKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMD 177 (317)
T ss_dssp EEEECCTTCBHHHHHHHHH------TTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECC
T ss_pred EEEEeCCCCcHHHHHHHHH------hcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEe
Confidence 9999999999999996321 1245689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCc-------cccccccccccccccccccCCC---cCcccchhhHHHHHHHHHhCCCCCCccccccccHH
Q 046598 847 FGLARFLPLSSAQ-------TSSIGAKGSIGYIAPEYGLGSE---VSISGDVYSYGILLLELITRKKPTDIMFEGDMNLH 916 (986)
Q Consensus 847 FG~a~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~ 916 (986)
||.++........ .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...........
T Consensus 178 fg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~ 257 (317)
T 2buj_A 178 LGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA 257 (317)
T ss_dssp CSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHH
T ss_pred cCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhh
Confidence 9998765321111 0112345799999999987654 68999999999999999999999863322221111
Q ss_pred HHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 917 NLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 917 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..... .... + .....+.++.+++.+||+.||++|||++||
T Consensus 258 ~~~~~------------~~~~-~-----------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 297 (317)
T 2buj_A 258 LAVQN------------QLSI-P-----------------QSPRHSSALWQLLNSMMTVDPHQRPHIPLL 297 (317)
T ss_dssp HHHHC------------C--C-C-----------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHhhc------------cCCC-C-----------------ccccCCHHHHHHHHHHhhcChhhCCCHHHH
Confidence 11111 0000 0 001223467899999999999999998764
No 159
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.8e-38 Score=343.89 Aligned_cols=248 Identities=23% Similarity=0.280 Sum_probs=201.5
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc---CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
..++|.+.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.++++++||||+++++++ ..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~ 87 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF-----EDN 87 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECS
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeee-----ccC
Confidence 356899999999999999999999999999999998753 233456788999999999999999999994 456
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
+..++||||+++++|.+++.. ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 88 ~~~~lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~ 154 (294)
T 2rku_A 88 DFVFVVLELCRRRSLLELHKR----------RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEV 154 (294)
T ss_dssp SEEEEEEECCTTCBHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCE
T ss_pred CEEEEEEecCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCE
Confidence 789999999999999998842 24689999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
||+|||.++....... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... ....
T Consensus 155 kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~-- 225 (294)
T 2rku_A 155 KIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----ETYL-- 225 (294)
T ss_dssp EECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH--
T ss_pred EEEeccCceecccCcc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHH--
Confidence 9999999987643222 223356899999999999999999999999999999999999999632211 1100
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+..... ..+ ...+..+.+++.+||+.||++|||++|+
T Consensus 226 ------~~~~~~~-~~~-------------------~~~~~~~~~li~~~l~~~p~~Rps~~~l 263 (294)
T 2rku_A 226 ------RIKKNEY-SIP-------------------KHINPVAASLIQKMLQTDPTARPTINEL 263 (294)
T ss_dssp ------HHHTTCC-CCC-------------------TTSCHHHHHHHHHHTCSSGGGSCCGGGG
T ss_pred ------HHhhccC-CCc-------------------cccCHHHHHHHHHHcccChhhCcCHHHH
Confidence 0000000 000 0123456789999999999999999875
No 160
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.7e-38 Score=345.49 Aligned_cols=255 Identities=19% Similarity=0.279 Sum_probs=200.5
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
..++|++.+.||+|+||.||+|++..+++.||||++..... .+++.+|+++++.++|++++..+.++ ...+...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~----~~~~~~~ 80 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWC----GAEGDYN 80 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEE----EEETTEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccc----cCCCCce
Confidence 35789999999999999999999988899999999875432 35688999999999998888777665 3455788
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEe---cCCCcE
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILL---DEDMIA 842 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~ 842 (986)
++||||+ +++|.+++.. ....+++.+++.++.||+.||+|||++ +|+||||||+||++ +.++.+
T Consensus 81 ~lv~e~~-~~~L~~~~~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~ 147 (296)
T 3uzp_A 81 VMVMELL-GPSLEDLFNF---------CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLV 147 (296)
T ss_dssp EEEEECC-CCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCE
T ss_pred EEEEEec-CCCHHHHHHh---------hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeE
Confidence 9999999 9999999962 234689999999999999999999999 99999999999999 488899
Q ss_pred EEcccccceecCCCCCc-----cccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCcccccc--ccH
Q 046598 843 HIGDFGLARFLPLSSAQ-----TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGD--MNL 915 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~--~~~ 915 (986)
||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+
T Consensus 148 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 227 (296)
T 3uzp_A 148 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY 227 (296)
T ss_dssp EECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHH
T ss_pred EEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhh
Confidence 99999999876543221 11234579999999999999999999999999999999999999997532221 111
Q ss_pred HHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 916 HNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 916 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
............. ......+.++.+++.+||+.||++|||++||
T Consensus 228 ~~~~~~~~~~~~~---------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 271 (296)
T 3uzp_A 228 ERISEKKMSTPIE---------------------------VLCKGYPSEFATYLNFCRSLRFDDKPDYSYL 271 (296)
T ss_dssp HHHHHHHHHSCHH---------------------------HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHH
T ss_pred hhhcccccCCchH---------------------------HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHH
Confidence 1111110000000 0001234568899999999999999998764
No 161
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-38 Score=358.56 Aligned_cols=202 Identities=26% Similarity=0.321 Sum_probs=168.3
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcCCCCcceeeeeeccccc-cCCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-YQGN 762 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~ 762 (986)
..++|++.+.||+|+||.||+|.+..+++.||||++... .....+++.+|+++++.++||||+++++++.... ....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 357899999999999999999999999999999998542 2334567899999999999999999999964321 1223
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
...|+||||+ +++|.++++. ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~-----------~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~ 167 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKH-----------EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCEL 167 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHH-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCE
T ss_pred ceEEEEEecC-CCCHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCE
Confidence 5679999999 8899999852 3588999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCc
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG-SEVSISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
||+|||+++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 168 kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 228 (367)
T 1cm8_A 168 KILDFGLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 228 (367)
T ss_dssp EECCCTTCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEEeeecccccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999875321 234568999999999887 6899999999999999999999999974
No 162
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.7e-38 Score=343.90 Aligned_cols=246 Identities=21% Similarity=0.287 Sum_probs=196.4
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
..++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++ .+.
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 81 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF-----HDA 81 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECS
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheE-----ecC
Confidence 3578999999999999999999999999999999986422 22346788999999999999999999994 456
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
...++||||+++++|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~ 148 (279)
T 3fdn_A 82 TRVYLILEYAPLGTVYRELQK----------LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL 148 (279)
T ss_dssp SEEEEEECCCTTEEHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCE
T ss_pred CEEEEEEecCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCE
Confidence 789999999999999999852 24589999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
||+|||++...... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||..... .....
T Consensus 149 ~l~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~-- 217 (279)
T 3fdn_A 149 KIADFGWSVHAPSS----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-----QETYK-- 217 (279)
T ss_dssp EECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHH--
T ss_pred EEEeccccccCCcc----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH-----HHHHH--
Confidence 99999998654322 22345689999999999999999999999999999999999999963211 11110
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+.. .....+ ...+..+.+++.+||+.||++|||++||
T Consensus 218 ------~~~~-~~~~~~-------------------~~~~~~~~~li~~~l~~~p~~Rps~~e~ 255 (279)
T 3fdn_A 218 ------RISR-VEFTFP-------------------DFVTEGARDLISRLLKHNPSQRPMLREV 255 (279)
T ss_dssp ------HHHH-TCCCCC-------------------TTSCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred ------HHHh-CCCCCC-------------------CcCCHHHHHHHHHHhccChhhCCCHHHH
Confidence 0000 000000 0123456789999999999999998764
No 163
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4e-39 Score=356.46 Aligned_cols=273 Identities=21% Similarity=0.303 Sum_probs=192.6
Q ss_pred cCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCch-hHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEE
Q 046598 688 DRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHG-AFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 688 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
++|.+.+.||+|+||+||+|++..+++.||||+++..... ....+.+|++++++++||||+++++++ ..+...+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 76 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII-----HTEKSLT 76 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEE-----ECSSCEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEE-----eeCCEEE
Confidence 5799999999999999999999988999999998643322 122456799999999999999999994 4567899
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEcc
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIGD 846 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 846 (986)
+||||++ |+|.+++.. ....+++.+++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 77 lv~e~~~-~~l~~~~~~---------~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~D 143 (324)
T 3mtl_A 77 LVFEYLD-KDLKQYLDD---------CGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLAD 143 (324)
T ss_dssp EEEECCS-EEHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECS
T ss_pred EEecccc-cCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEcc
Confidence 9999996 599998862 234689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhC--
Q 046598 847 FGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG-SEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTAL-- 923 (986)
Q Consensus 847 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~-- 923 (986)
||+++..... ........||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+ .........-
T Consensus 144 fg~a~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~ 220 (324)
T 3mtl_A 144 FGLARAKSIP--TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILGTP 220 (324)
T ss_dssp SSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCC
T ss_pred CcccccccCC--ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCC
Confidence 9999865322 222234568999999999876 568999999999999999999999997432211 1111111100
Q ss_pred -CCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 924 -PDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 924 -~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
...+.......-...... .................++.+++.+|++.||++|||++|+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 279 (324)
T 3mtl_A 221 TEETWPGILSNEEFKTYNY-----PKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDA 279 (324)
T ss_dssp CTTTSTTGGGCHHHHHTCC-----CCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred ChHhchhhhcchhhccccc-----ccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHH
Confidence 000111100000000000 0000000011112334567899999999999999998764
No 164
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=9.6e-39 Score=361.92 Aligned_cols=248 Identities=23% Similarity=0.370 Sum_probs=189.8
Q ss_pred cCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcCC--CCcceeeeeeccccccCCCc
Q 046598 688 DRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIR--HRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 688 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~~~ 763 (986)
++|++.+.||+|+||.||+|.+.. ++.||||++... .....+.+.+|++++++++ ||||+++++++ ..++
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~-----~~~~ 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-----ITDQ 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSS
T ss_pred CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEE-----ecCC
Confidence 469999999999999999999876 889999999753 2344578899999999996 59999999984 4457
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..|+||| +.+++|.+++.. ...+++.++..|+.||+.||+|||+. +|+||||||+|||++ ++.+|
T Consensus 130 ~~~lv~E-~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~k 194 (390)
T 2zmd_A 130 YIYMVME-CGNIDLNSWLKK----------KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLK 194 (390)
T ss_dssp EEEEEEE-CCSEEHHHHHHH----------CSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEE
T ss_pred EEEEEEe-cCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEE
Confidence 7999999 568899999952 23688899999999999999999999 999999999999995 58999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccC-----------CCcCcccchhhHHHHHHHHHhCCCCCCcccccc
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG-----------SEVSISGDVYSYGILLLELITRKKPTDIMFEGD 912 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~ 912 (986)
|+|||+++.+.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 195 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 274 (390)
T 2zmd_A 195 LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274 (390)
T ss_dssp ECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH
T ss_pred EEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH
Confidence 999999987654333333345679999999999865 468999999999999999999999996432111
Q ss_pred ccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 913 MNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.. +..+++........+ ..+.++.+++.+||+.||++|||++||
T Consensus 275 ~~------------~~~~~~~~~~~~~~~------------------~~~~~~~~li~~~L~~dP~~Rps~~el 318 (390)
T 2zmd_A 275 SK------------LHAIIDPNHEIEFPD------------------IPEKDLQDVLKCCLKRDPKQRISIPEL 318 (390)
T ss_dssp HH------------HHHHHCTTSCCCCCC------------------CSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HH------------HHHHhCccccCCCCc------------------cchHHHHHHHHHHcccChhhCCCHHHH
Confidence 01 111111111110000 112357789999999999999998764
No 165
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-38 Score=346.29 Aligned_cols=252 Identities=25% Similarity=0.288 Sum_probs=194.4
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
.++|.+.++||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++ ......
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~ 95 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF-----EDYHNM 95 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhe-----ecCCeE
Confidence 467999999999999999999999989999999997543 33457899999999999999999999994 456789
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEe---cCCCcE
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILL---DEDMIA 842 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~ 842 (986)
++||||+++|+|.+++.... .....+++..++.|+.|++.||+|||+. +|+||||||+||++ +.++.+
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~ 166 (285)
T 3is5_A 96 YIVMETCEGGELLERIVSAQ------ARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPI 166 (285)
T ss_dssp EEEECCCSCCBHHHHHHHHH------HHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCE
T ss_pred EEEEEeCCCCcHHHHHHhhh------hcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCE
Confidence 99999999999999985221 1235689999999999999999999999 99999999999999 456789
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
||+|||+++..... .......|++.|+|||++. ..++.++|||||||++|||++|+.||......+ ........
T Consensus 167 kl~Dfg~a~~~~~~---~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~--~~~~~~~~ 240 (285)
T 3is5_A 167 KIIDFGLAELFKSD---EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE--VQQKATYK 240 (285)
T ss_dssp EECCCCCCCC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHC
T ss_pred EEEeeecceecCCc---ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH--HHhhhccC
Confidence 99999999765432 2223456899999999875 568999999999999999999999996422111 00000000
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+.. ... ....+.++.+++.+||+.||++|||++||
T Consensus 241 ~~~~---------~~~-------------------~~~~~~~~~~li~~~L~~dP~~Rps~~e~ 276 (285)
T 3is5_A 241 EPNY---------AVE-------------------CRPLTPQAVDLLKQMLTKDPERRPSAAQV 276 (285)
T ss_dssp CCCC---------CC---------------------CCCCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred Cccc---------ccc-------------------cCcCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 0000 000 00123456789999999999999998764
No 166
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.9e-39 Score=354.26 Aligned_cols=250 Identities=24% Similarity=0.380 Sum_probs=190.0
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeE----EEEEEeec-cCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTT----IAVKVFNL-LHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 761 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 761 (986)
.++|++.+.||+|+||.||+|++..+++. ||+|.+.. ......+.+.+|+.++++++||||++++++|..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----- 88 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 88 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES-----
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec-----
Confidence 46799999999999999999999776665 46666643 233456789999999999999999999999632
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI 841 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 841 (986)
...++|+||+++|+|.+++.. ....+++.+++.|+.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 89 -~~~~~v~~~~~~g~L~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~ 155 (327)
T 3lzb_A 89 -STVQLITQLMPFGCLLDYVRE---------HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 155 (327)
T ss_dssp -SSEEEEECCCSSCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTE
T ss_pred -CCceEEEEecCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCC
Confidence 347899999999999999963 234689999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHH
Q 046598 842 AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~ 920 (986)
+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .....
T Consensus 156 ~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~-- 231 (327)
T 3lzb_A 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSI-- 231 (327)
T ss_dssp EEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHH--
T ss_pred EEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHH--
Confidence 99999999987654444344444567889999999999999999999999999999999 99999743221 11111
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+........ ...++.++.+++.+||+.||++|||++||
T Consensus 232 ----------~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~el 269 (327)
T 3lzb_A 232 ----------LEKGERLPQ------------------PPICTIDVYMIMRKCWMIDADSRPKFREL 269 (327)
T ss_dssp ----------HHTTCCCCC------------------CTTBCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ----------HHcCCCCCC------------------CccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 111100000 01233457899999999999999998764
No 167
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=9.4e-39 Score=346.17 Aligned_cols=250 Identities=23% Similarity=0.365 Sum_probs=187.4
Q ss_pred hhcCCCCCcccccccceeEEEEEECCC---CeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDG---RTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 761 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 761 (986)
..++|++.+.||+|+||.||+|.+..+ +..||+|+.+... ....+.+.+|+.++++++||||+++++++.
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------ 86 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------ 86 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC------
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc------
Confidence 356899999999999999999998643 4679999986532 334567899999999999999999999842
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI 841 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 841 (986)
++..++||||+++++|.+++.. ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 154 (281)
T 1mp8_A 87 ENPVWIIMELCTLGELRSFLQV---------RKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDC 154 (281)
T ss_dssp SSSCEEEEECCTTEEHHHHHHH---------TTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTE
T ss_pred cCccEEEEecCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCC
Confidence 3567999999999999999962 234689999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHH
Q 046598 842 AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~ 920 (986)
+||+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |..||......+ ......
T Consensus 155 ~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~~i~ 231 (281)
T 1mp8_A 155 VKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIE 231 (281)
T ss_dssp EEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHH
T ss_pred EEECccccccccCcccc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHHHHH
Confidence 99999999987643222 12233456789999999998899999999999999999997 999997432211 111110
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
....... ...++.++.+++.+||+.||++|||++||
T Consensus 232 -----------~~~~~~~-------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l 267 (281)
T 1mp8_A 232 -----------NGERLPM-------------------PPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267 (281)
T ss_dssp -----------TTCCCCC-------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -----------cCCCCCC-------------------CCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 0000000 01234567899999999999999998764
No 168
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4e-38 Score=350.12 Aligned_cols=248 Identities=23% Similarity=0.280 Sum_probs=201.7
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc---CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
..++|.+.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.+++.++||||+++++++ .++
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~ 113 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF-----EDN 113 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECS
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----ecC
Confidence 357899999999999999999999999999999998753 234457789999999999999999999994 456
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
+..++||||+++++|.+++.. ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+
T Consensus 114 ~~~~lv~e~~~~~~L~~~~~~----------~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 180 (335)
T 2owb_A 114 DFVFVVLELCRRRSLLELHKR----------RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEV 180 (335)
T ss_dssp SEEEEEECCCTTCBHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCE
T ss_pred CeEEEEEecCCCCCHHHHHhc----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCE
Confidence 789999999999999999852 24689999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
||+|||+++....... ......|+..|+|||++.+..++.++|||||||++|||++|+.||...... ....
T Consensus 181 kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~-- 251 (335)
T 2owb_A 181 KIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----ETYL-- 251 (335)
T ss_dssp EECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH--
T ss_pred EEeeccCceecccCcc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH-----HHHH--
Confidence 9999999987643222 223456899999999999999999999999999999999999999632111 1100
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+..... ..+ ......+.+++.+||+.||++|||++|+
T Consensus 252 ------~~~~~~~-~~~-------------------~~~~~~~~~li~~~l~~dp~~Rps~~el 289 (335)
T 2owb_A 252 ------RIKKNEY-SIP-------------------KHINPVAASLIQKMLQTDPTARPTINEL 289 (335)
T ss_dssp ------HHHHTCC-CCC-------------------TTSCHHHHHHHHHHTCSSGGGSCCGGGG
T ss_pred ------HHhcCCC-CCC-------------------ccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 0000000 000 0123356789999999999999999875
No 169
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.1e-38 Score=354.47 Aligned_cols=251 Identities=21% Similarity=0.273 Sum_probs=195.3
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcC-CCCcceeeeeeccccccCCCce
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 764 (986)
..++|++.+.||+|+||.||+|.++.+++.||||+++.... ...+|++++.++ +||||++++++ +.++..
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~-----~~~~~~ 90 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDV-----YDDGKY 90 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEE-----EECSSE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEE-----EEcCCE
Confidence 46789999999999999999999999999999999975432 235688888887 79999999999 456688
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCC----C
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDED----M 840 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~ 840 (986)
.|+||||+++|+|.+++.. .+.+++.++..++.||+.||+|||++ ||+||||||+||++..+ +
T Consensus 91 ~~lv~E~~~gg~L~~~i~~----------~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~ 157 (342)
T 2qr7_A 91 VYVVTELMKGGELLDKILR----------QKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPE 157 (342)
T ss_dssp EEEEECCCCSCBHHHHHHT----------CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGG
T ss_pred EEEEEeCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcC
Confidence 9999999999999999952 24689999999999999999999999 99999999999998543 3
Q ss_pred cEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHH
Q 046598 841 IAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 841 ~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~ 920 (986)
.+||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........
T Consensus 158 ~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~~~ 233 (342)
T 2qr7_A 158 SIRICDFGFAKQLRAEN--GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPEEILA 233 (342)
T ss_dssp GEEECCCTTCEECBCTT--CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT--SCHHHHHH
T ss_pred eEEEEECCCcccCcCCC--CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc--CCHHHHHH
Confidence 59999999998764332 223345789999999999888899999999999999999999999974211 11111111
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. +......... . .....+.++.+++.+||+.||++|||++||
T Consensus 234 ~--------i~~~~~~~~~-~---------------~~~~~s~~~~~li~~~L~~dP~~R~t~~~i 275 (342)
T 2qr7_A 234 R--------IGSGKFSLSG-G---------------YWNSVSDTAKDLVSKMLHVDPHQRLTAALV 275 (342)
T ss_dssp H--------HHHCCCCCCS-T---------------TTTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred H--------HccCCcccCc-c---------------ccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 0 0000000000 0 001233457799999999999999998753
No 170
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.9e-38 Score=365.16 Aligned_cols=244 Identities=26% Similarity=0.371 Sum_probs=195.4
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
.++|++.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++++++||||++++++|. ..+...+
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~~~~ 263 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLY 263 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEE----CTTSCEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEE----cCCCceE
Confidence 467889999999999999999986 5799999997543 4578999999999999999999999863 3345789
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEcc
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIGD 846 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 846 (986)
+||||+++|+|.++++... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 264 iv~e~~~~g~L~~~l~~~~--------~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~D 332 (450)
T 1k9a_A 264 IVTEYMAKGSLVDYLRSRG--------RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSD 332 (450)
T ss_dssp EEEECCTTCBHHHHHHHHC--------TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECC
T ss_pred EEEEecCCCcHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEee
Confidence 9999999999999996321 22478999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCC
Q 046598 847 FGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLARTALPD 925 (986)
Q Consensus 847 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 925 (986)
||+++..... .....++..|+|||++.+..++.++|||||||++|||+| |+.||......+ ....
T Consensus 333 fG~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~------- 398 (450)
T 1k9a_A 333 FGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPR------- 398 (450)
T ss_dssp CTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHHH-------
T ss_pred CCCccccccc-----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH-------
Confidence 9999864321 112357889999999999999999999999999999999 999996432211 1111
Q ss_pred chhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 926 HVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 926 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+...... ..+..++.++.+++.+||+.||++|||++||
T Consensus 399 -----i~~~~~~------------------~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l 436 (450)
T 1k9a_A 399 -----VEKGYKM------------------DAPDGCPPAVYDVMKNCWHLDAATRPTFLQL 436 (450)
T ss_dssp -----HHTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -----HHcCCCC------------------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 1100000 0011345678899999999999999998764
No 171
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=7.6e-39 Score=370.29 Aligned_cols=201 Identities=23% Similarity=0.304 Sum_probs=166.5
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc---CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
.++|++.+.||+|+||.||+|.+..+++.||||+++.. .......+.+|+++++.++||||++++++| ...+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~-----~~~~ 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTHD 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEE-----EETT
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEE-----eeCC
Confidence 46799999999999999999999999999999999742 334456778999999999999999999994 4557
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHh-cCCCCeEeecCCCCCeEecCCCcE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHH-DCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ . ||+||||||+|||++.++.+
T Consensus 222 ~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~ 288 (446)
T 4ejn_A 222 RLCFVMEYANGGELFFHLSR----------ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHI 288 (446)
T ss_dssp EEEEEECCCSSCBHHHHHHH----------HSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCE
T ss_pred EEEEEEeeCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCE
Confidence 89999999999999999852 3468999999999999999999998 7 99999999999999999999
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCc
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
||+|||+|+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 289 kl~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 351 (446)
T 4ejn_A 289 KITDFGLCKEGIKD--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 351 (446)
T ss_dssp EECCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEccCCCceeccCC--CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence 99999999754322 2223446799999999999999999999999999999999999999963
No 172
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=3.2e-38 Score=349.71 Aligned_cols=264 Identities=20% Similarity=0.257 Sum_probs=205.5
Q ss_pred CCCcChHHHHHhhcCCCCC-cccccccceeEEEEEECCCCeEEEEEEeeccC--chhHHHHHHHHHHHhcC-CCCcceee
Q 046598 675 FPNISYQNLYNATDRFSSV-NQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNI-RHRNLVKI 750 (986)
Q Consensus 675 ~~~~~~~~~~~~~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l 750 (986)
.++..++......++|.+. +.||+|+||.||+|.+..+++.||+|+++... ......+.+|+.+++.+ +||||+++
T Consensus 15 ~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~ 94 (327)
T 3lm5_A 15 TENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINL 94 (327)
T ss_dssp -CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred chhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEE
Confidence 4566677777788889988 89999999999999999999999999987432 33457889999999999 56999999
Q ss_pred eeeccccccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCC
Q 046598 751 LTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLK 830 (986)
Q Consensus 751 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlk 830 (986)
+++ +......++||||+++|+|.+++.. .....+++.+++.++.|++.||+|||+. ||+|||||
T Consensus 95 ~~~-----~~~~~~~~lv~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dik 158 (327)
T 3lm5_A 95 HEV-----YENTSEIILILEYAAGGEIFSLCLP--------ELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLK 158 (327)
T ss_dssp EEE-----EECSSEEEEEEECCTTEEGGGGGSS--------CC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCC
T ss_pred EEE-----EEeCCeEEEEEEecCCCcHHHHHHH--------hcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCC
Confidence 999 4566889999999999999999852 2234689999999999999999999999 99999999
Q ss_pred CCCeEecC---CCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCc
Q 046598 831 PSNILLDE---DMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 831 p~NIll~~---~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
|+||+++. ++.+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 159 p~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 235 (327)
T 3lm5_A 159 PQNILLSSIYPLGDIKIVDFGMSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVG 235 (327)
T ss_dssp GGGEEESCBTTBCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred hHHEEEecCCCCCcEEEeeCccccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999998 7899999999998764322 22345699999999999999999999999999999999999999963
Q ss_pred cccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 908 MFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
....+ ....... .... .+.+ .....+..+.+++.+||+.||++|||++|+
T Consensus 236 ~~~~~-~~~~i~~-~~~~------------~~~~---------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~~l 285 (327)
T 3lm5_A 236 EDNQE-TYLNISQ-VNVD------------YSEE---------------TFSSVSQLATDFIQSLLVKNPEKRPTAEIC 285 (327)
T ss_dssp SSHHH-HHHHHHH-TCCC------------CCTT---------------TTTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred CCchH-HHHHHHh-cccc------------cCch---------------hhcccCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 22110 0000000 0000 0000 001234457789999999999999998763
No 173
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.4e-38 Score=354.70 Aligned_cols=245 Identities=26% Similarity=0.351 Sum_probs=194.3
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
.++|.+.+.||+|+||+||+|++..+++.||||++.... ....+++.+|++++++++||||+++++++ ..+.
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~ 127 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCY-----LREH 127 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETT
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECC
Confidence 356889999999999999999998889999999997532 23346789999999999999999999995 4457
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..++||||++ |++.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 128 ~~~lv~e~~~-g~l~~~l~~---------~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~k 194 (348)
T 1u5q_A 128 TAWLVMEYCL-GSASDLLEV---------HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVK 194 (348)
T ss_dssp EEEEEEECCS-EEHHHHHHH---------HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEE
T ss_pred eEEEEEecCC-CCHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEE
Confidence 8999999996 688888752 234689999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCcccccccccccccccccccc---CCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHH
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGL---GSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~ 920 (986)
|+|||+++.... .....||+.|+|||++. +..++.++|||||||++|||++|+.||....... .......
T Consensus 195 L~DfG~a~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~~ 267 (348)
T 1u5q_A 195 LGDFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQ 267 (348)
T ss_dssp ECCCTTCBSSSS------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHH
T ss_pred EeeccCceecCC------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHh
Confidence 999999976532 12356899999999874 5679999999999999999999999986321110 0001110
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
...+. . . ....+..+.+++.+||+.||++|||++||
T Consensus 268 ~~~~~---------~---~------------------~~~~~~~l~~li~~~l~~dP~~Rps~~~l 303 (348)
T 1u5q_A 268 NESPA---------L---Q------------------SGHWSEYFRNFVDSCLQKIPQDRPTSEVL 303 (348)
T ss_dssp SCCCC---------C---C------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cCCCC---------C---C------------------CCCCCHHHHHHHHHHcccChhhCcCHHHH
Confidence 00000 0 0 00123457789999999999999998763
No 174
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=354.72 Aligned_cols=277 Identities=24% Similarity=0.353 Sum_probs=194.3
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHH--HhcCCCCcceeeeeeccccccCCCce
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNT--LKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.++|++.+.||+|+||.||+|++. ++.||||+++... ...+..|.++ +..++||||+++++++..........
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSLD--ERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEET--TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEEC--CeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 468999999999999999999874 6899999997543 2334444444 55589999999998765544566677
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcC------CCCeEeecCCCCCeEecC
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDC------QPPIAHCDLKPSNILLDE 838 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------~~~ivH~Dlkp~NIll~~ 838 (986)
.++||||+++|+|.+++.. ...++..+..++.||+.||+|||+.+ .++|+||||||+||+++.
T Consensus 87 ~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~ 155 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSL-----------HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKN 155 (336)
T ss_dssp EEEEECCCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECT
T ss_pred EEEEEecCCCCcHHHHHhh-----------cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcC
Confidence 8999999999999999952 23588899999999999999999862 338999999999999999
Q ss_pred CCcEEEcccccceecCCCCC------ccccccccccccccccccccC-------CCcCcccchhhHHHHHHHHHhCCCCC
Q 046598 839 DMIAHIGDFGLARFLPLSSA------QTSSIGAKGSIGYIAPEYGLG-------SEVSISGDVYSYGILLLELITRKKPT 905 (986)
Q Consensus 839 ~~~~kL~DFG~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlGvvl~elltg~~pf 905 (986)
++.+||+|||+++.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||
T Consensus 156 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~ 235 (336)
T 3g2f_A 156 DGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDL 235 (336)
T ss_dssp TSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGG
T ss_pred CCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcC
Confidence 99999999999987643221 122234569999999999887 46778999999999999999997776
Q ss_pred CccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCC
Q 046598 906 DIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTN 985 (986)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~e 985 (986)
............+..........+.+......... .............++.++.+++.+||+.||++|||++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 308 (336)
T 3g2f_A 236 FPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQ-------RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQX 308 (336)
T ss_dssp STTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCC-------CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred CCccchhHHHHhhhcccCCCchHHHHHhhhccccc-------CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHH
Confidence 42221111000111101111111111111100000 00000111112245667899999999999999999976
Q ss_pred C
Q 046598 986 V 986 (986)
Q Consensus 986 V 986 (986)
|
T Consensus 309 ~ 309 (336)
T 3g2f_A 309 A 309 (336)
T ss_dssp H
T ss_pred H
Confidence 4
No 175
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=5e-38 Score=340.94 Aligned_cols=250 Identities=20% Similarity=0.250 Sum_probs=197.3
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc------hhHHHHHHHHHHHhcCCCCcceeeeeeccccccC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH------GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ 760 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 760 (986)
.++|++.+.||+|+||.||+|++..+++.||+|+++.... ...+.+.+|++++++++||||+++++++ .
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~ 78 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIF-----E 78 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----E
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhhee-----c
Confidence 3579999999999999999999998899999999875322 1357899999999999999999999994 4
Q ss_pred CCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCC
Q 046598 761 GNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDM 840 (986)
Q Consensus 761 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 840 (986)
.....++||||+++++|.+++.. ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~ 145 (283)
T 3bhy_A 79 NKTDVVLILELVSGGELFDFLAE----------KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKN 145 (283)
T ss_dssp CSSEEEEEEECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSS
T ss_pred CCCeEEEEEeecCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCC
Confidence 56789999999999999999952 24689999999999999999999999 999999999999998877
Q ss_pred ----cEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHH
Q 046598 841 ----IAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLH 916 (986)
Q Consensus 841 ----~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~ 916 (986)
.+||+|||.++...... ......+++.|+|||++.+..++.++||||||+++|+|++|+.||......
T Consensus 146 ~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----- 217 (283)
T 3bhy_A 146 VPNPRIKLIDFGIAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ----- 217 (283)
T ss_dssp SSSCCEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----
T ss_pred CCCCceEEEecccceeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-----
Confidence 89999999998764322 223356899999999999999999999999999999999999998632211
Q ss_pred HHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 917 NLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 917 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..... +.. ..... ........+..+.+++.+||+.||++|||++|+
T Consensus 218 ~~~~~--------~~~----~~~~~------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~ 263 (283)
T 3bhy_A 218 ETLTN--------ISA----VNYDF------------DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQS 263 (283)
T ss_dssp HHHHH--------HHT----TCCCC------------CHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred HHHHH--------hHh----cccCC------------cchhcccCCHHHHHHHHHHccCCHhHCcCHHHH
Confidence 11000 000 00000 000111234567899999999999999998763
No 176
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3e-38 Score=368.55 Aligned_cols=249 Identities=24% Similarity=0.350 Sum_probs=199.8
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc---CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
.++|++.+.||+|+||.||+|++..+++.||+|++... .......+.+|++++++++||||++++++ +.+++
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~-----~~~~~ 257 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYA-----YETKD 257 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEE-----EECSS
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEE-----EeeCC
Confidence 46799999999999999999999999999999999642 22334678899999999999999999998 45668
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..|+||||++||+|.+++.... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 258 ~l~lVmEy~~gg~L~~~l~~~~--------~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vK 326 (576)
T 2acx_A 258 ALCLVLTLMNGGDLKFHIYHMG--------QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIR 326 (576)
T ss_dssp EEEEEECCCCSCBHHHHHHSSS--------SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEE
T ss_pred EEEEEEEcCCCCcHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeE
Confidence 8999999999999999996322 23589999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhC
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTAL 923 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 923 (986)
|+|||+++....... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... .......
T Consensus 327 L~DFGla~~~~~~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~~~i~~--- 399 (576)
T 2acx_A 327 ISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVER--- 399 (576)
T ss_dssp ECCCTTCEECCTTCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CHHHHHH---
T ss_pred EEecccceecccCcc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hHHHHHH---
Confidence 999999987643322 234579999999999999999999999999999999999999997432211 1111110
Q ss_pred CCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCC
Q 046598 924 PDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSM 983 (986)
Q Consensus 924 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 983 (986)
.+.. .+... ....+.++.+++.+||+.||++||++
T Consensus 400 ------~i~~----~~~~~---------------p~~~s~~~~dLI~~lL~~dP~~R~g~ 434 (576)
T 2acx_A 400 ------LVKE----VPEEY---------------SERFSPQARSLCSQLLCKDPAERLGC 434 (576)
T ss_dssp ------HHHH----CCCCC---------------CTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred ------Hhhc----ccccC---------------CccCCHHHHHHHHHhccCCHHHcCCC
Confidence 0000 00000 00123457799999999999999953
No 177
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=6.9e-39 Score=351.32 Aligned_cols=264 Identities=25% Similarity=0.396 Sum_probs=199.5
Q ss_pred hcCCCCCcccccccceeEEEEE----ECCCCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGI----LDDGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 761 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 761 (986)
.++|++.+.||+|+||.||+|+ +..+++.||||+++... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~ 96 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---DG 96 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEec---CC
Confidence 3568999999999999999999 45678999999997432 3345788999999999999999999998642 23
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI 841 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 841 (986)
....++||||+++++|.+++.. ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~ 164 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPK---------NKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQ 164 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHH---------HTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTE
T ss_pred CceEEEEEEeCCCCcHHHHHHh---------ccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCC
Confidence 3668999999999999999952 234589999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceecCCCCCc-cccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHH
Q 046598 842 AHIGDFGLARFLPLSSAQ-TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~ 920 (986)
+||+|||+++........ .......+|..|+|||++.+..++.++||||+|+++|+|++|+.|+.... .....
T Consensus 165 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~ 238 (302)
T 4e5w_A 165 VKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM------ALFLK 238 (302)
T ss_dssp EEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH------HHHHH
T ss_pred EEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh------hHHhh
Confidence 999999999877544322 22334568888999999999999999999999999999999999864221 11111
Q ss_pred hhCCC---c-hhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPD---H-VMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~---~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
...+. . ............ +.+....++.++.+++.+||+.||++|||++||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 293 (302)
T 4e5w_A 239 MIGPTHGQMTVTRLVNTLKEGK---------------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNL 293 (302)
T ss_dssp HHCSCCGGGHHHHHHHHHHTTC---------------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred ccCCcccccCHHHHHHHHhccC---------------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHH
Confidence 10010 0 111111100000 000111334568899999999999999998764
No 178
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.1e-38 Score=353.59 Aligned_cols=277 Identities=26% Similarity=0.354 Sum_probs=191.5
Q ss_pred HHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc--hhHHHHHHHHHHHhcCCCCcceeeeeeccccccCC
Q 046598 684 YNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH--GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 761 (986)
Q Consensus 684 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 761 (986)
....++|++.+.||+|+||+||+|++..+++.||||+++.... ...+.+.+|++++++++||||+++++++ ..
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~ 104 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVI-----HH 104 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEE-----EE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEE-----ec
Confidence 3456789999999999999999999999999999999964332 2345678999999999999999999994 45
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEe-----
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILL----- 836 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll----- 836 (986)
+...++||||++ |+|.+++.. ...+++.+++.|+.||+.||+|||+. +|+||||||+||++
T Consensus 105 ~~~~~lv~e~~~-~~L~~~~~~----------~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~ 170 (329)
T 3gbz_A 105 NHRLHLIFEYAE-NDLKKYMDK----------NPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDA 170 (329)
T ss_dssp TTEEEEEEECCS-EEHHHHHHH----------CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC---
T ss_pred CCEEEEEEecCC-CCHHHHHhh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCC
Confidence 678999999997 599999952 23589999999999999999999999 99999999999999
Q ss_pred cCCCcEEEcccccceecCCCCCccccccccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCccccccccH
Q 046598 837 DEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGS-EVSISGDVYSYGILLLELITRKKPTDIMFEGDMNL 915 (986)
Q Consensus 837 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~ 915 (986)
+.++.+||+|||+++...... .......+|+.|+|||++.+. .++.++|||||||++|||++|+.||......+. .
T Consensus 171 ~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~ 247 (329)
T 3gbz_A 171 SETPVLKIGDFGLARAFGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ-L 247 (329)
T ss_dssp --CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-H
T ss_pred CccceEEECcCCCccccCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH-H
Confidence 455569999999998654221 223345689999999998874 589999999999999999999999974322111 1
Q ss_pred HHHHHh-hCCCc-hhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 916 HNLART-ALPDH-VMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 916 ~~~~~~-~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
...... ..+.. ....... .......... .+..............++.+++.+||+.||++|||++|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 316 (329)
T 3gbz_A 248 FKIFEVLGLPDDTTWPGVTA--LPDWKQSFPK--FRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNA 316 (329)
T ss_dssp HHHHHHHCCCCTTTSTTGGG--STTCCTTCCC--CCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHhCCCchhhhhhhhh--hhhhhhhhhh--hccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHH
Confidence 111111 11110 0000000 0000000000 000000000111234567899999999999999998764
No 179
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.7e-39 Score=356.89 Aligned_cols=266 Identities=21% Similarity=0.373 Sum_probs=204.3
Q ss_pred HHHHHhhcCCCCCcccccccceeEEEEEEC-----CCCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeec
Q 046598 681 QNLYNATDRFSSVNQIGEGSFGSVFKGILD-----DGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTAC 754 (986)
Q Consensus 681 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 754 (986)
++.....++|++.+.||+|+||.||+|++. .+++.||||++.... .....++.+|++++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344456788999999999999999999886 346889999987533 23456789999999999999999999994
Q ss_pred cccccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCe
Q 046598 755 SGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNI 834 (986)
Q Consensus 755 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NI 834 (986)
..+...++||||+++|+|.+++...............+++.+++.++.||+.||+|||++ +|+||||||+||
T Consensus 98 -----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NI 169 (322)
T 1p4o_A 98 -----SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNC 169 (322)
T ss_dssp -----CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGE
T ss_pred -----ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceE
Confidence 455778999999999999999963221100011124578999999999999999999999 999999999999
Q ss_pred EecCCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccc
Q 046598 835 LLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDM 913 (986)
Q Consensus 835 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~ 913 (986)
+++.++.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 170 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--- 246 (322)
T 1p4o_A 170 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--- 246 (322)
T ss_dssp EECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH---
T ss_pred EEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH---
Confidence 999999999999999986543333333334557889999999998899999999999999999999 8999863211
Q ss_pred cHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 914 NLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
...... +........+ ..++.++.+++.+||+.||++|||+.||
T Consensus 247 --~~~~~~--------~~~~~~~~~~-------------------~~~~~~l~~li~~~l~~dp~~Rps~~e~ 290 (322)
T 1p4o_A 247 --EQVLRF--------VMEGGLLDKP-------------------DNCPDMLFELMRMCWQYNPKMRPSFLEI 290 (322)
T ss_dssp --HHHHHH--------HHTTCCCCCC-------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred --HHHHHH--------HHcCCcCCCC-------------------CCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 111110 0000000000 1234557899999999999999998764
No 180
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.1e-38 Score=369.51 Aligned_cols=249 Identities=27% Similarity=0.438 Sum_probs=198.8
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
..++|.+.+.||+|+||.||+|.+.. +..||||+++... ...+.+.+|++++++++||||+++++++. .+..
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~------~~~~ 257 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT------KEPI 257 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETT-TEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSSC
T ss_pred chHHeEEEEEcccCCceEEEEEEECC-ccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe------CCcc
Confidence 35678999999999999999999975 6789999997643 34678999999999999999999999852 3568
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEc
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIG 845 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 845 (986)
++||||+++|+|.++++.. ....+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 258 ~lv~e~~~~g~L~~~l~~~--------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~ 326 (454)
T 1qcf_A 258 YIITEFMAKGSLLDFLKSD--------EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIA 326 (454)
T ss_dssp EEEECCCTTCBHHHHHHSH--------HHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEEC
T ss_pred EEEEeecCCCcHHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEe
Confidence 9999999999999999622 123578899999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCC
Q 046598 846 DFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLARTALP 924 (986)
Q Consensus 846 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 924 (986)
|||+++...... ........++..|+|||++.+..++.++|||||||++|||+| |+.||...... ...
T Consensus 327 DFG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-----~~~----- 395 (454)
T 1qcf_A 327 DFGLARVIEDNE-YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVI----- 395 (454)
T ss_dssp STTGGGGBCCHH-HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHH-----
T ss_pred eCCCceEcCCCc-eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-----HHH-----
Confidence 999998754221 122233456789999999998899999999999999999999 99999632211 111
Q ss_pred CchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 925 DHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 925 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..+..... .+.+..++.++.+++.+||+.||++|||+++|
T Consensus 396 ----~~i~~~~~------------------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i 435 (454)
T 1qcf_A 396 ----RALERGYR------------------MPRPENCPEELYNIMMRCWKNRPEERPTFEYI 435 (454)
T ss_dssp ----HHHHHTCC------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ----HHHHcCCC------------------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 01110000 00011345568899999999999999998764
No 181
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=347.07 Aligned_cols=247 Identities=28% Similarity=0.376 Sum_probs=187.6
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
.++|++.+.||+|+||.||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++. +..+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~ 75 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL-------NPVC 75 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT-------TTTE
T ss_pred HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc-------CCcE
Confidence 357899999999999999999986 588999998643 34578999999999999999999999853 3378
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc-EEEc
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI-AHIG 845 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-~kL~ 845 (986)
+||||+++|+|.+++.... ....+++.+++.++.|+++||+|||+....+|+||||||+||+++.++. +||+
T Consensus 76 lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~ 148 (307)
T 2eva_A 76 LVMEYAEGGSLYNVLHGAE-------PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKIC 148 (307)
T ss_dssp EEEECCTTCBHHHHHHCSS-------SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEEC
T ss_pred EEEEcCCCCCHHHHHhccC-------CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEc
Confidence 9999999999999996322 1234788999999999999999999932229999999999999998886 7999
Q ss_pred ccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCC
Q 046598 846 DFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALPD 925 (986)
Q Consensus 846 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 925 (986)
|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...................
T Consensus 149 Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~- 222 (307)
T 2eva_A 149 DFGTACDIQTH-----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR- 222 (307)
T ss_dssp CCCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC-
T ss_pred ccccccccccc-----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC-
Confidence 99999754321 223458999999999999999999999999999999999999997432211111100000000
Q ss_pred chhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 926 HVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 926 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+. ....++..+.+++.+||+.||++|||++||
T Consensus 223 -------------~~----------------~~~~~~~~l~~li~~~l~~dp~~Rps~~el 254 (307)
T 2eva_A 223 -------------PP----------------LIKNLPKPIESLMTRCWSKDPSQRPSMEEI 254 (307)
T ss_dssp -------------CC----------------CBTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -------------CC----------------cccccCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 00 000223457789999999999999998764
No 182
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-38 Score=358.31 Aligned_cols=250 Identities=25% Similarity=0.391 Sum_probs=185.9
Q ss_pred CCCCCcccccccceeEEEEEECCC---CeEEEEEEeecc-CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 689 RFSSVNQIGEGSFGSVFKGILDDG---RTTIAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 689 ~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.|++.+.||+|+||.||+|.+... ...||||+++.. .....+++.+|+.++++++||||++++++| +..++.
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~----~~~~~~ 165 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC----LRSEGS 165 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEE----CCCSSC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE----EcCCCC
Confidence 466778999999999999997532 346899998643 334567899999999999999999999986 334567
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHI 844 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 844 (986)
.++||||+++|+|.++++. ....+++.+++.++.||++||+|||+. +|+||||||+||+++.++.+||
T Consensus 166 ~~lv~e~~~~g~L~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL 233 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKV 233 (373)
T ss_dssp CEEEEECCTTCBHHHHHHC---------TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEE
T ss_pred eEEEEECCCCCCHHHHHhh---------cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEE
Confidence 8999999999999999962 234588999999999999999999999 9999999999999999999999
Q ss_pred cccccceecCCCCCc--cccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHHh
Q 046598 845 GDFGLARFLPLSSAQ--TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLART 921 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~ 921 (986)
+|||+++........ .......+|+.|+|||++.+..++.++|||||||++|||+| |.+||......+ .......
T Consensus 234 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~~~~ 311 (373)
T 3c1x_A 234 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLLQ 311 (373)
T ss_dssp CCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHHHHT
T ss_pred eeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHHHHc
Confidence 999999865432211 12234457889999999999999999999999999999999 677776332211 1111110
Q ss_pred hCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 922 ALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 922 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. .....+ ..++..+.+++.+||+.||++|||++||
T Consensus 312 ~-----------~~~~~p-------------------~~~~~~l~~li~~cl~~dp~~RPs~~el 346 (373)
T 3c1x_A 312 G-----------RRLLQP-------------------EYCPDPLYEVMLKCWHPKAEMRPSFSEL 346 (373)
T ss_dssp T-----------CCCCCC-------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred C-----------CCCCCC-------------------CCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 0 000000 1234467899999999999999998764
No 183
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1e-38 Score=358.32 Aligned_cols=202 Identities=26% Similarity=0.338 Sum_probs=158.3
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcCCCCcceeeeeecccc-ccCCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGV-DYQGN 762 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~~ 762 (986)
..++|++.+.||+|+||.||+|.+..+++.||||++... .....+++.+|+++++.++||||+++++++... .....
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 457899999999999999999999999999999998642 234457788999999999999999999986432 12334
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
...++||||+ +++|.+++.. ..+++..+..++.||++||+|||+. ||+||||||+||+++.++.+
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~-----------~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~ 171 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC-----------QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 171 (367)
T ss_dssp CCCEEEEECC-CEECC----------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred CeEEEEeccc-CCCHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCE
Confidence 6689999999 7899988851 3589999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCc
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG-SEVSISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
||+|||+++.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 172 kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 232 (367)
T 2fst_X 172 KILDFGLARHTAD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232 (367)
T ss_dssp EECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred EEeeccccccccc-----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999986432 1234578999999999887 6899999999999999999999999964
No 184
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.1e-38 Score=347.13 Aligned_cols=244 Identities=20% Similarity=0.328 Sum_probs=193.2
Q ss_pred hcCCCCCcccccccceeEEEEEECCCC-------eEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeecccccc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGR-------TTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 759 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 759 (986)
.++|.+.+.||+|+||.||+|.+..++ ..||+|+++.......+.+.+|++++++++||||+++++++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~----- 81 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVC----- 81 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEE-----
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEE-----
Confidence 467999999999999999999987655 57999999876666778899999999999999999999994
Q ss_pred CCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCC
Q 046598 760 QGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDED 839 (986)
Q Consensus 760 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 839 (986)
..++..++||||+++++|.+++.. ....+++..++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 82 ~~~~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 149 (289)
T 4fvq_A 82 VCGDENILVQEFVKFGSLDTYLKK---------NKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIRE 149 (289)
T ss_dssp CCTTCCEEEEECCTTCBHHHHHHH---------TGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEEC
T ss_pred EeCCCCEEEEECCCCCCHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecC
Confidence 445778999999999999999962 233489999999999999999999999 99999999999999988
Q ss_pred Cc--------EEEcccccceecCCCCCccccccccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCcccc
Q 046598 840 MI--------AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG-SEVSISGDVYSYGILLLELITRKKPTDIMFE 910 (986)
Q Consensus 840 ~~--------~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvvl~elltg~~pf~~~~~ 910 (986)
+. +||+|||.+..... .....+++.|+|||++.+ ..++.++|||||||++|||++|..|+.....
T Consensus 150 ~~~~~~~~~~~kl~Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~ 223 (289)
T 4fvq_A 150 EDRKTGNPPFIKLSDPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD 223 (289)
T ss_dssp CBGGGTBCCEEEECCCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred CcccccccceeeeccCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc
Confidence 87 99999999965421 122457889999999987 6799999999999999999996554331111
Q ss_pred ccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 911 GDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
... ....... .. ..+. ..+.++.+++.+||+.||++|||++||
T Consensus 224 ~~~-~~~~~~~------------~~-~~~~-------------------~~~~~l~~li~~~l~~dp~~Rps~~~l 266 (289)
T 4fvq_A 224 SQR-KLQFYED------------RH-QLPA-------------------PKAAELANLINNCMDYEPDHRPSFRAI 266 (289)
T ss_dssp HHH-HHHHHHT------------TC-CCCC-------------------CSSCTTHHHHHHHSCSSGGGSCCHHHH
T ss_pred hHH-HHHHhhc------------cC-CCCC-------------------CCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 100 0000000 00 0000 012246789999999999999998764
No 185
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=6.6e-38 Score=348.14 Aligned_cols=275 Identities=20% Similarity=0.270 Sum_probs=201.5
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCC-CCcceeeeeeccccccCCCceE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~ 765 (986)
.++|++.+.||+|+||+||+|++..+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.. ......
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~---~~~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKD---PVSRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEEC---TTTCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeecc---CCCCce
Confidence 46799999999999999999999988999999998743 3467899999999997 9999999998642 235678
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCC-cEEE
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDM-IAHI 844 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL 844 (986)
++||||+++++|.++++ .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++ .+||
T Consensus 109 ~lv~e~~~~~~l~~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl 172 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQ-------------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRL 172 (330)
T ss_dssp EEEEECCCCCCHHHHGG-------------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEE
T ss_pred EEEEeccCchhHHHHHH-------------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEE
Confidence 99999999999999984 478899999999999999999999 999999999999999777 8999
Q ss_pred cccccceecCCCCCccccccccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhC
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG-SEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTAL 923 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 923 (986)
+|||+++....... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||.................-
T Consensus 173 ~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~ 249 (330)
T 3nsz_A 173 IDWGLAEFYHPGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 249 (330)
T ss_dssp CCCTTCEECCTTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHC
T ss_pred EeCCCceEcCCCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcC
Confidence 99999987643322 233568999999999877 67899999999999999999999998533222212222111111
Q ss_pred CCchhHHhhhhcccCCcch---hhcc--chhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 924 PDHVMDIVDSTLLNDGEDL---IVHG--NQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 924 ~~~~~~~~d~~l~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.....+.++..-....... .... ...............+.++.+++.+||+.||++|||++|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~ 317 (330)
T 3nsz_A 250 TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 317 (330)
T ss_dssp HHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred CchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHH
Confidence 1112222111110000000 0000 0000000000111235568899999999999999998764
No 186
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=7.2e-38 Score=350.85 Aligned_cols=283 Identities=22% Similarity=0.330 Sum_probs=201.2
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC--chhHHHHHHHHHHHhcCCCCcceeeeeecccccc---CC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY---QG 761 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---~~ 761 (986)
.++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++++..... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 478999999999999999999999889999999986432 2234678899999999999999999999754311 12
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI 841 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 841 (986)
.+..++||||+++ +|.+.+.. ....+++.+++.|+.||+.||+|||+. ||+||||||+||+++.++.
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~ 162 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSN---------VLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGV 162 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHC---------TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred CceEEEEEeccCC-CHHHHHhh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCC
Confidence 4678999999965 77777752 234589999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceecCCCCC--ccccccccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHH
Q 046598 842 AHIGDFGLARFLPLSSA--QTSSIGAKGSIGYIAPEYGLG-SEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNL 918 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~ 918 (986)
+||+|||+++.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .....
T Consensus 163 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i 241 (351)
T 3mi9_A 163 LKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALI 241 (351)
T ss_dssp EEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHH
T ss_pred EEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHH
Confidence 99999999987643222 222344568999999999876 468999999999999999999999997432211 11111
Q ss_pred HH--hhCCCc-hhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 919 AR--TALPDH-VMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 919 ~~--~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.. ...+.. ....-........ .. .....+....+. .......++.+++.+|++.||++|||++|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 309 (351)
T 3mi9_A 242 SQLCGSITPEVWPNVDNYELYEKL-EL-VKGQKRKVKDRL-KAYVRDPYALDLIDKLLVLDPAQRIDSDDA 309 (351)
T ss_dssp HHHHCCCCTTTSTTGGGCGGGTSS-CC-CSSCCCCHHHHH-HHHHCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHhCCCChhhccccccchhhccc-cc-ccccccCHHHHh-hhccCChHHHHHHHHHhcCChhhCCCHHHH
Confidence 11 111111 1111000000000 00 000001111111 111124567899999999999999998764
No 187
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.9e-38 Score=351.37 Aligned_cols=260 Identities=22% Similarity=0.368 Sum_probs=200.7
Q ss_pred hcCCCCCcccccccceeEEEEEEC-------CCCeEEEEEEeeccC-chhHHHHHHHHHHHhcC-CCCcceeeeeecccc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILD-------DGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNI-RHRNLVKILTACSGV 757 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 757 (986)
.++|++.+.||+|+||.||+|.+. .+++.||||+++... ....+++.+|+++++++ +||||++++++|
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~--- 110 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--- 110 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE---
Confidence 578999999999999999999985 346789999997543 34457789999999999 899999999994
Q ss_pred ccCCCceEEEEEEeccCCCHhHhhccCCCCCc------cccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCC
Q 046598 758 DYQGNDFKALVFEFMHNRSLEEWLHPITREDE------TDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKP 831 (986)
Q Consensus 758 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 831 (986)
..++..++||||+++|+|.+++........ .......+++.+++.++.||+.||+|||+. +|+||||||
T Consensus 111 --~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 185 (334)
T 2pvf_A 111 --TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 185 (334)
T ss_dssp --CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred --ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCcc
Confidence 455788999999999999999975432100 001234589999999999999999999999 999999999
Q ss_pred CCeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCcccc
Q 046598 832 SNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFE 910 (986)
Q Consensus 832 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~ 910 (986)
+||+++.++.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 186 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 265 (334)
T 2pvf_A 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265 (334)
T ss_dssp GGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred ceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH
Confidence 999999999999999999987754443333444567889999999988899999999999999999999 9999863211
Q ss_pred ccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 911 GDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..... .+........ ...++.++.+++.+||+.||++|||++||
T Consensus 266 -----~~~~~---------~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~el 309 (334)
T 2pvf_A 266 -----EELFK---------LLKEGHRMDK------------------PANCTNELYMMMRDCWHAVPSQRPTFKQL 309 (334)
T ss_dssp -----HHHHH---------HHHHTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -----HHHHH---------HHhcCCCCCC------------------CccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 11110 0100000000 01234467899999999999999998764
No 188
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.9e-38 Score=346.51 Aligned_cols=250 Identities=22% Similarity=0.238 Sum_probs=197.4
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
..++|.+.+.||+|+||.||+|++..+++.||+|+++.......+.+.+|++++++++||||+++++++ ......
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 81 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY-----ESTTHY 81 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEE-----ECSSEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhc-----ccCCEE
Confidence 356799999999999999999999988999999999865544556789999999999999999999984 456789
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEe---cCCCcE
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILL---DEDMIA 842 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~ 842 (986)
++||||+++++|.+++.. .+.+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+
T Consensus 82 ~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~ 148 (304)
T 2jam_A 82 YLVMQLVSGGELFDRILE----------RGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKI 148 (304)
T ss_dssp EEEECCCCSCBHHHHHHH----------HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCE
T ss_pred EEEEEcCCCccHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCE
Confidence 999999999999999842 24589999999999999999999999 99999999999999 788899
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
||+|||.++.... .......|++.|+|||++.+..++.++||||+||++|+|++|+.||...... .......
T Consensus 149 kl~Dfg~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~i~-- 220 (304)
T 2jam_A 149 MITDFGLSKMEQN----GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--KLFEKIK-- 220 (304)
T ss_dssp EBCSCSTTCCCCC----BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHH--
T ss_pred EEccCCcceecCC----CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHH--
Confidence 9999999975432 1223356899999999999999999999999999999999999998632211 0101110
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
...... +. +.....+.++.+++.+|++.||++|||++|+
T Consensus 221 ---------~~~~~~-~~---------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~ 259 (304)
T 2jam_A 221 ---------EGYYEF-ES---------------PFWDDISESAKDFICHLLEKDPNERYTCEKA 259 (304)
T ss_dssp ---------HCCCCC-CT---------------TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHH
T ss_pred ---------cCCCCC-Cc---------------cccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 000000 00 0001234567899999999999999998763
No 189
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.5e-38 Score=351.12 Aligned_cols=268 Identities=24% Similarity=0.319 Sum_probs=205.5
Q ss_pred HHHHHhhcCCCCCcccccccceeEEEEEE-----CCCCeEEEEEEeeccCc-hhHHHHHHHHHHHhcC-CCCcceeeeee
Q 046598 681 QNLYNATDRFSSVNQIGEGSFGSVFKGIL-----DDGRTTIAVKVFNLLHH-GAFKSFIAECNTLKNI-RHRNLVKILTA 753 (986)
Q Consensus 681 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~ 753 (986)
.+.....++|++.+.||+|+||.||+|++ ..+++.||||+++.... ...+.+.+|+++++++ +||||++++++
T Consensus 20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 99 (316)
T 2xir_A 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 99 (316)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEE
Confidence 34444568899999999999999999985 34578999999975432 3456789999999999 79999999998
Q ss_pred ccccccCCCceEEEEEEeccCCCHhHhhccCCCCCcc------ccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEee
Q 046598 754 CSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDET------DEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHC 827 (986)
Q Consensus 754 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~------~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~ 827 (986)
|. ..+...++||||+++++|.+++......... ......+++.+++.++.||+.||+|||+. +|+||
T Consensus 100 ~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~ 172 (316)
T 2xir_A 100 CT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 172 (316)
T ss_dssp EC----CTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred Ee----cCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccccc
Confidence 63 3345689999999999999999754321000 01123489999999999999999999999 99999
Q ss_pred cCCCCCeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCC
Q 046598 828 DLKPSNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTD 906 (986)
Q Consensus 828 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~ 906 (986)
||||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||+| |+.||.
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 9999999999999999999999987654444344445668899999999999999999999999999999998 999986
Q ss_pred ccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 907 IMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
...... ............ ..+ ...+.++.+++.+||+.||++|||++||
T Consensus 253 ~~~~~~-~~~~~~~~~~~~-----------~~~-------------------~~~~~~l~~li~~~l~~dp~~Rps~~el 301 (316)
T 2xir_A 253 GVKIDE-EFCRRLKEGTRM-----------RAP-------------------DYTTPEMYQTMLDCWHGEPSQRPTFSEL 301 (316)
T ss_dssp TCCCSH-HHHHHHHHTCCC-----------CCC-------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ccchhH-HHHHHhccCccC-----------CCC-------------------CCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 432211 111111110000 000 0123457899999999999999998764
No 190
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.8e-38 Score=342.10 Aligned_cols=244 Identities=28% Similarity=0.397 Sum_probs=185.0
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc----hhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH----GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
.++|++.+.||+|+||.||+|.+. ++.||||+++.... ...+.+.+|+++++.++||||+++++++ ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 78 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVC-----LKE 78 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEE-----CCC
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE-----ecC
Confidence 467999999999999999999986 68899999864322 2346789999999999999999999994 455
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCC---eEeecCCCCCeEecC-
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPP---IAHCDLKPSNILLDE- 838 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~---ivH~Dlkp~NIll~~- 838 (986)
+..++||||+++++|.+++. ...+++.+++.++.|++.||+|||++ + |+||||||+||+++.
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~-----------~~~~~~~~~~~i~~~l~~~l~~lH~~---~~~~i~H~dikp~Nil~~~~ 144 (271)
T 3dtc_A 79 PNLCLVMEFARGGPLNRVLS-----------GKRIPPDILVNWAVQIARGMNYLHDE---AIVPIIHRDLKSSNILILQK 144 (271)
T ss_dssp --CEEEEECCTTEEHHHHHT-----------SSCCCHHHHHHHHHHHHHHHHHHHHS---SSSCCCCSCCSGGGEEESSC
T ss_pred CceEEEEEcCCCCCHHHHhh-----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCceeecCCchHHEEEecc
Confidence 77899999999999999984 23589999999999999999999999 7 999999999999986
Q ss_pred -------CCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccc
Q 046598 839 -------DMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEG 911 (986)
Q Consensus 839 -------~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~ 911 (986)
++.+||+|||.++...... .....|++.|+|||++.+..++.++||||||+++|+|++|+.||......
T Consensus 145 ~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 220 (271)
T 3dtc_A 145 VENGDLSNKILKITDFGLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL 220 (271)
T ss_dssp CSSSCCSSCCEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH
T ss_pred cccccccCcceEEccCCccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 6789999999998654322 22356899999999999999999999999999999999999999642211
Q ss_pred cccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 912 DMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. .... .......... +..++.++.+++.+||+.||++|||++||
T Consensus 221 ~-----~~~~--------~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~ 264 (271)
T 3dtc_A 221 A-----VAYG--------VAMNKLALPI------------------PSTCPEPFAKLMEDCWNPDPHSRPSFTNI 264 (271)
T ss_dssp H-----HHHH--------HHTSCCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred H-----HHHh--------hhcCCCCCCC------------------CcccCHHHHHHHHHHhcCCcccCcCHHHH
Confidence 1 0000 0000000000 01234567899999999999999998764
No 191
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=6.9e-38 Score=343.44 Aligned_cols=247 Identities=24% Similarity=0.339 Sum_probs=200.7
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.++++++||||+++++++ ..+...
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 95 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY-----LKDTKL 95 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEE-----ecCCeE
Confidence 467999999999999999999999889999999997543 34467899999999999999999999984 345789
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEc
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIG 845 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 845 (986)
++||||+++++|.+++.. ..+++.++..++.|++.||.|||+. +|+||||||+||+++.++.+||+
T Consensus 96 ~lv~e~~~~~~L~~~~~~-----------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 161 (303)
T 3a7i_A 96 WIIMEYLGGGSALDLLEP-----------GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLA 161 (303)
T ss_dssp EEEEECCTTEEHHHHHTT-----------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred EEEEEeCCCCcHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEe
Confidence 999999999999999851 3589999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCC
Q 046598 846 DFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALPD 925 (986)
Q Consensus 846 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 925 (986)
|||.+....... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||....... .........+.
T Consensus 162 Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~ 237 (303)
T 3a7i_A 162 DFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK--VLFLIPKNNPP 237 (303)
T ss_dssp CCTTCEECBTTB--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCC
T ss_pred ecccceecCccc--cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH--HHHHhhcCCCC
Confidence 999998764322 22234568999999999999999999999999999999999999986322110 00000000000
Q ss_pred chhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 926 HVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 926 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
... ...+..+.+++.+||+.||++|||++||
T Consensus 238 ------------~~~------------------~~~~~~l~~li~~~l~~dp~~Rps~~~l 268 (303)
T 3a7i_A 238 ------------TLE------------------GNYSKPLKEFVEACLNKEPSFRPTAKEL 268 (303)
T ss_dssp ------------CCC------------------SSCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred ------------CCc------------------cccCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 000 0123457799999999999999998764
No 192
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.6e-38 Score=344.16 Aligned_cols=251 Identities=25% Similarity=0.434 Sum_probs=203.8
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
..++|++.+.||+|+||.||+|.+..++..||+|+++... ...+.+.+|++++++++||||+++++++ ..+...
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~ 84 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREPPF 84 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCCE
Confidence 4678999999999999999999999889999999997533 4457899999999999999999999994 456789
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEc
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIG 845 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 845 (986)
++||||+++++|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~~~~~~--------~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~ 153 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLRECN--------RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVA 153 (288)
T ss_dssp EEEEECCTTEEHHHHHHHCC--------TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEEEEcCCCCcHHHHHHhcc--------cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEc
Confidence 99999999999999996322 34589999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCC
Q 046598 846 DFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLARTALP 924 (986)
Q Consensus 846 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 924 (986)
|||.++...... ........+++.|+|||++.+..++.++||||||+++|+|++ |..||...... ...
T Consensus 154 Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~-------- 222 (288)
T 3kfa_A 154 DFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVY-------- 222 (288)
T ss_dssp CCCGGGTSCSSS-SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHH--------
T ss_pred cCccceeccCCc-cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHH--------
Confidence 999998764332 223344557889999999998999999999999999999999 99998643211 111
Q ss_pred CchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 925 DHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 925 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+.+........ ...++.++.+++.+|++.||++|||++||
T Consensus 223 ----~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~~ 262 (288)
T 3kfa_A 223 ----ELLEKDYRMER------------------PEGCPEKVYELMRACWQWNPSDRPSFAEI 262 (288)
T ss_dssp ----HHHHTTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ----HHHhccCCCCC------------------CCCCCHHHHHHHHHHhCCChhhCcCHHHH
Confidence 11111110000 01234567899999999999999998764
No 193
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=6.5e-38 Score=342.32 Aligned_cols=251 Identities=21% Similarity=0.283 Sum_probs=193.9
Q ss_pred CCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEEEE
Q 046598 689 RFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALV 768 (986)
Q Consensus 689 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 768 (986)
+|.....||+|+||.||+|.+..+++.||||+++.......+.+.+|+.+++.++||||+++++++ ...+..++|
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv 97 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF-----SENGFIKIF 97 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEE-----EETTEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEE-----EeCCcEEEE
Confidence 345556899999999999999988999999999876666678899999999999999999999994 445789999
Q ss_pred EEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecC-CCcEEEccc
Q 046598 769 FEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDE-DMIAHIGDF 847 (986)
Q Consensus 769 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~DF 847 (986)
|||+++++|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 98 ~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Df 167 (295)
T 2clq_A 98 MEQVPGGSLSALLRSKW-------GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDF 167 (295)
T ss_dssp EECCSEEEHHHHHHHTT-------CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCT
T ss_pred EEeCCCCCHHHHHHhhc-------cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeec
Confidence 99999999999996321 123467889999999999999999999 9999999999999987 899999999
Q ss_pred ccceecCCCCCccccccccccccccccccccCCC--cCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCC
Q 046598 848 GLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSE--VSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALPD 925 (986)
Q Consensus 848 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 925 (986)
|.++...... .......|++.|+|||++.+.. ++.++||||||+++|+|++|+.||...................
T Consensus 168 g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~- 244 (295)
T 2clq_A 168 GTSKRLAGIN--PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH- 244 (295)
T ss_dssp TTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCC-
T ss_pred ccccccCCCC--CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccc-
Confidence 9998764322 2223456899999999987653 7899999999999999999999986322111000000000000
Q ss_pred chhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 926 HVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 926 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
... ....+.++.+++.+||+.||++|||++|+
T Consensus 245 -----------~~~------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~l 276 (295)
T 2clq_A 245 -----------PEI------------------PESMSAEAKAFILKCFEPDPDKRACANDL 276 (295)
T ss_dssp -----------CCC------------------CTTSCHHHHHHHHHTTCSSTTTSCCHHHH
T ss_pred -----------ccc------------------cccCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 000 01233457789999999999999998763
No 194
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-37 Score=345.34 Aligned_cols=267 Identities=25% Similarity=0.352 Sum_probs=194.4
Q ss_pred HHHHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcC--CCCcceeeeeecccccc
Q 046598 682 NLYNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNI--RHRNLVKILTACSGVDY 759 (986)
Q Consensus 682 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~~~ 759 (986)
......++|++.+.||+|+||.||+|++. ++.||||++.... ...+.+|.+++... +||||+++++++... .
T Consensus 31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~-~ 104 (337)
T 3mdy_A 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKG-T 104 (337)
T ss_dssp HHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEES-C
T ss_pred cccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccC-C
Confidence 33445678999999999999999999986 6899999986432 34455566666554 999999999986432 1
Q ss_pred CCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEeecCCCCCe
Q 046598 760 QGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDC-----QPPIAHCDLKPSNI 834 (986)
Q Consensus 760 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-----~~~ivH~Dlkp~NI 834 (986)
......++||||+++|+|.++++. ..+++.+++.++.|++.||+|||+.. .++|+||||||+||
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Ni 173 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKS-----------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNI 173 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGE
T ss_pred CCCCceEEEEeccCCCcHHHHhhc-----------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHE
Confidence 222678999999999999999952 25899999999999999999999751 34899999999999
Q ss_pred EecCCCcEEEcccccceecCCCCCcc--ccccccccccccccccccCCCcCcc------cchhhHHHHHHHHHhCC----
Q 046598 835 LLDEDMIAHIGDFGLARFLPLSSAQT--SSIGAKGSIGYIAPEYGLGSEVSIS------GDVYSYGILLLELITRK---- 902 (986)
Q Consensus 835 ll~~~~~~kL~DFG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~------sDvwSlGvvl~elltg~---- 902 (986)
+++.++.+||+|||+++......... ......||+.|+|||++.+..++.+ +|||||||++|||+||.
T Consensus 174 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~ 253 (337)
T 3mdy_A 174 LVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGG 253 (337)
T ss_dssp EECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTT
T ss_pred EECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccc
Confidence 99999999999999998764332211 1224569999999999988766655 99999999999999994
Q ss_pred ------CCCCccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCC
Q 046598 903 ------KPTDIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMES 976 (986)
Q Consensus 903 ------~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~d 976 (986)
.||.................... ....... ......+++.++.+++.+||+.|
T Consensus 254 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-------------~~~~~~~~~~~l~~li~~~l~~d 312 (337)
T 3mdy_A 254 IVEEYQLPYHDLVPSDPSYEDMREIVCIK--------KLRPSFP-------------NRWSSDECLRQMGKLMTECWAHN 312 (337)
T ss_dssp BCCCCCCTTTTTSCSSCCHHHHHHHHTTS--------CCCCCCC-------------GGGGGSHHHHHHHHHHHHHSCSS
T ss_pred ccccccccHhhhcCCCCchhhhHHHHhhh--------ccCcccc-------------ccchhhHHHHHHHHHHHHhhhhC
Confidence 44443322222222211111000 0000000 01112256778999999999999
Q ss_pred CCCCCCCCCC
Q 046598 977 PEDRMSMTNV 986 (986)
Q Consensus 977 P~~RPt~~eV 986 (986)
|++|||++||
T Consensus 313 P~~Rps~~el 322 (337)
T 3mdy_A 313 PASRLTALRV 322 (337)
T ss_dssp GGGSCCHHHH
T ss_pred hhhCCCHHHH
Confidence 9999998764
No 195
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.2e-37 Score=351.21 Aligned_cols=202 Identities=25% Similarity=0.285 Sum_probs=165.8
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcCCCCcceeeeeeccccc-cCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-YQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~ 763 (986)
.++|++.+.||+|+||.||+|.+..+++.||||++... .....+.+.+|+.+++.++||||+++++++.... .....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 46899999999999999999999988999999999753 2344567889999999999999999999864321 23345
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..++||||++ ++|.+++. ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 104 ~~~lv~e~~~-~~l~~~~~------------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~k 167 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQ------------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLK 167 (371)
T ss_dssp EEEEEEECCS-EEHHHHHH------------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred ceEEEEEcCC-CCHHHHHh------------hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEE
Confidence 7899999996 57888874 2478999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCc
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
|+|||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 168 l~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 228 (371)
T 2xrw_A 168 ILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 228 (371)
T ss_dssp ECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEEeecccccccc---cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999865322 122345689999999999999999999999999999999999999974
No 196
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4e-38 Score=354.69 Aligned_cols=278 Identities=20% Similarity=0.192 Sum_probs=200.6
Q ss_pred hHHHHHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc-----------hhHHHHHHHHHHHhcCCCCcce
Q 046598 680 YQNLYNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH-----------GAFKSFIAECNTLKNIRHRNLV 748 (986)
Q Consensus 680 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv 748 (986)
..++....++|.+.+.||+|+||.||+|.+.. ++.||||++..... ...+.+.+|++++++++||||+
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 45777889999999999999999999999876 89999999854221 1237789999999999999999
Q ss_pred eeeeeccccccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeec
Q 046598 749 KILTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCD 828 (986)
Q Consensus 749 ~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~D 828 (986)
++++++...........++||||++ |+|.+++. .....+++.++..++.||+.||+|||+. +|+|||
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~---------~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~D 159 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIH---------DQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRD 159 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHH---------CTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCC
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHH---------hcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecC
Confidence 9999975443345567899999996 68888885 2234689999999999999999999999 999999
Q ss_pred CCCCCeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCc
Q 046598 829 LKPSNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG-SEVSISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 829 lkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
|||+||+++.++.+||+|||+++..... .......+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||..
T Consensus 160 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 236 (362)
T 3pg1_A 160 LHPGNILLADNNDITICDFNLAREDTAD---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236 (362)
T ss_dssp CCGGGEEECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CChHHEEEcCCCCEEEEecCcccccccc---cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999754322 22334568999999999877 6799999999999999999999999974
Q ss_pred cccccccHHHHHHhhCCCc-----------hhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCC
Q 046598 908 MFEGDMNLHNLARTALPDH-----------VMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMES 976 (986)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~-----------~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~d 976 (986)
....+ ............. ..+.+.......+.. ............+.+++.+|++.|
T Consensus 237 ~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~li~~~L~~d 304 (362)
T 3pg1_A 237 STFYN-QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPAR-----------AWTAVVPTADPVALDLIAKMLEFN 304 (362)
T ss_dssp SSHHH-HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCC-----------CHHHHSTTSCHHHHHHHHHHTCSS
T ss_pred CCHHH-HHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChh-----------hHHhhCCCCCHHHHHHHHHHhcCC
Confidence 32211 1111111111111 111111111111100 001111123456789999999999
Q ss_pred CCCCCCCCCC
Q 046598 977 PEDRMSMTNV 986 (986)
Q Consensus 977 P~~RPt~~eV 986 (986)
|++|||++|+
T Consensus 305 P~~Rpt~~el 314 (362)
T 3pg1_A 305 PQRRISTEQA 314 (362)
T ss_dssp GGGSCCHHHH
T ss_pred hhhCCCHHHH
Confidence 9999998763
No 197
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.6e-38 Score=344.03 Aligned_cols=254 Identities=22% Similarity=0.283 Sum_probs=199.4
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC--chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++.. ..+..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID---RTNTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---GGGTE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEec---CCCce
Confidence 568999999999999999999999889999999997532 3445678999999999999999999998532 23567
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEeecCCCCCeEecCC
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPP-----IAHCDLKPSNILLDED 839 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~-----ivH~Dlkp~NIll~~~ 839 (986)
.++||||+++++|.+++.... .....+++.+++.++.|++.||+|||+. + |+||||||+||+++.+
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~ 152 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKGT------KERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGK 152 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHHH------HTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSS
T ss_pred EEEEEeCCCCCCHHHHHHhhc------ccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCC
Confidence 899999999999999996322 1234589999999999999999999999 7 9999999999999999
Q ss_pred CcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHH
Q 046598 840 MIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLA 919 (986)
Q Consensus 840 ~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~ 919 (986)
+.+||+|||.++...... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... ......
T Consensus 153 ~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~i 228 (279)
T 2w5a_A 153 QNVKLGDFGLARILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGKI 228 (279)
T ss_dssp SCEEECCCCHHHHC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH
T ss_pred CCEEEecCchheeecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HHHHHH
Confidence 999999999998654322 1223356899999999999999999999999999999999999998743211 111111
Q ss_pred HhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 920 RTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 920 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. .......+ ...+.++.+++.+||+.||++|||++||
T Consensus 229 ~-----------~~~~~~~~-------------------~~~~~~l~~li~~~l~~~p~~Rps~~~l 265 (279)
T 2w5a_A 229 R-----------EGKFRRIP-------------------YRYSDELNEIITRMLNLKDYHRPSVEEI 265 (279)
T ss_dssp H-----------HTCCCCCC-------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred h-----------hcccccCC-------------------cccCHHHHHHHHHHcCCCcccCCCHHHH
Confidence 0 00000000 0223467899999999999999998764
No 198
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.3e-38 Score=358.03 Aligned_cols=278 Identities=21% Similarity=0.255 Sum_probs=204.1
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
.++|.+.+.||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.. ......
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~---~~~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeecc---CCCCee
Confidence 467999999999999999999999999999999997533 2345678899999999999999999998542 234578
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEe----cCCCc
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILL----DEDMI 841 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~ 841 (986)
++||||+++|+|.+++.... ....+++.+++.++.||+.||+|||+. +|+||||||+||++ +.++.
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~-------~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 154 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPS-------NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSV 154 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGG-------GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEE
T ss_pred EEEEecCCCCCHHHHHHhhh-------cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCcee
Confidence 99999999999999996322 123489999999999999999999999 99999999999999 77888
Q ss_pred EEEcccccceecCCCCCccccccccccccccccccccC--------CCcCcccchhhHHHHHHHHHhCCCCCCccccccc
Q 046598 842 AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG--------SEVSISGDVYSYGILLLELITRKKPTDIMFEGDM 913 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~ 913 (986)
+||+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 155 ~kL~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~ 231 (396)
T 4eut_A 155 YKLTDFGAARELEDD---EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR 231 (396)
T ss_dssp EEECCGGGCEECCCG---GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT
T ss_pred EEEecCCCceEccCC---CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc
Confidence 999999999876432 22234569999999998765 5678999999999999999999999974332222
Q ss_pred cHHHHHH--hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 914 NLHNLAR--TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 914 ~~~~~~~--~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
....... ...+......+..... .+.+ +... ..............+.+++.+||+.||++|||++|+
T Consensus 232 ~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~--~~~~---~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~ 300 (396)
T 4eut_A 232 NKEVMYKIITGKPSGAISGVQKAEN-GPID--WSGD---MPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQF 300 (396)
T ss_dssp CHHHHHHHHHSCCTTCCEEEECSTT-CCEE--EESS---CCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHH
T ss_pred hHHHHHHHhcCCCcccchhheeccC-CCcc--cCcc---CCcccccchHHHhhchHHHHHhhccChhhhccHHHH
Confidence 2111111 1111100000000000 0000 0000 000011123566778899999999999999998753
No 199
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=7.4e-38 Score=339.74 Aligned_cols=245 Identities=22% Similarity=0.293 Sum_probs=199.0
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++ .+++
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 87 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYF-----HDRK 87 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEE-----EcCC
Confidence 467999999999999999999999889999999986432 22346789999999999999999999994 4567
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..++||||+++++|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~k 154 (284)
T 2vgo_A 88 RIYLMLEFAPRGELYKELQK----------HGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELK 154 (284)
T ss_dssp EEEEEECCCTTEEHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEE
T ss_pred EEEEEEEeCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEE
Confidence 89999999999999999952 23589999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhC
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTAL 923 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 923 (986)
|+|||.+...... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... ....
T Consensus 155 l~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~--- 222 (284)
T 2vgo_A 155 IADFGWSVHAPSL----RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-----ETHR--- 222 (284)
T ss_dssp ECCCTTCEECSSS----CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH---
T ss_pred EecccccccCccc----ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-----HHHH---
Confidence 9999999765322 123356899999999999999999999999999999999999999632111 1110
Q ss_pred CCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 924 PDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 924 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+..... ..+ ...+.++.+++.+|++.||++|||++||
T Consensus 223 -----~~~~~~~-~~~-------------------~~~~~~~~~li~~~l~~~p~~Rps~~~l 260 (284)
T 2vgo_A 223 -----RIVNVDL-KFP-------------------PFLSDGSKDLISKLLRYHPPQRLPLKGV 260 (284)
T ss_dssp -----HHHTTCC-CCC-------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred -----HHhcccc-CCC-------------------CcCCHHHHHHHHHHhhcCHhhCCCHHHH
Confidence 0000000 000 0123456789999999999999998763
No 200
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2e-38 Score=347.66 Aligned_cols=252 Identities=23% Similarity=0.304 Sum_probs=195.1
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
..++|++.+.||+|+||.||+|.+..+++.||+|++........+.+.+|++++++++||||+++++++ ..++..
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 91 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY-----YHDGKL 91 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECC-CE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeee-----eeCCeE
Confidence 457899999999999999999999988999999999776666678899999999999999999999984 445789
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEc
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIG 845 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 845 (986)
++||||+++++|.+++.. ....+++.+++.++.||+.||.|||+. +++||||||+||+++.++.+||+
T Consensus 92 ~lv~e~~~~~~l~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 159 (302)
T 2j7t_A 92 WIMIEFCPGGAVDAIMLE---------LDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLA 159 (302)
T ss_dssp EEEEECCTTEEHHHHHHH---------HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEEC
T ss_pred EEEEEeCCCCcHHHHHHh---------hccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEE
Confidence 999999999999999852 234589999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCccccccccccccccccccc-----cCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHH
Q 046598 846 DFGLARFLPLSSAQTSSIGAKGSIGYIAPEYG-----LGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 846 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~ 920 (986)
|||++..... .........|++.|+|||++ .+..++.++||||||+++|+|++|+.||....... .......
T Consensus 160 Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~ 236 (302)
T 2j7t_A 160 DFGVSAKNLK--TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAK 236 (302)
T ss_dssp CCHHHHHHHH--HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHH
T ss_pred ECCCCccccc--cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhc
Confidence 9999853211 11112234689999999987 46778999999999999999999999986432110 0000000
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..+... ......+.++.+++.+||+.||++|||++||
T Consensus 237 ----------------~~~~~~-------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 273 (302)
T 2j7t_A 237 ----------------SDPPTL-------------LTPSKWSVEFRDFLKIALDKNPETRPSAAQL 273 (302)
T ss_dssp ----------------SCCCCC-------------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred ----------------cCCccc-------------CCccccCHHHHHHHHHHcccChhhCCCHHHH
Confidence 000000 0001223457899999999999999998763
No 201
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2e-38 Score=352.70 Aligned_cols=264 Identities=23% Similarity=0.316 Sum_probs=202.7
Q ss_pred HHhhcCCCCCcccccccceeEEEEEECCCC-----eEEEEEEeeccC-chhHHHHHHHHHHHhcC-CCCcceeeeeeccc
Q 046598 684 YNATDRFSSVNQIGEGSFGSVFKGILDDGR-----TTIAVKVFNLLH-HGAFKSFIAECNTLKNI-RHRNLVKILTACSG 756 (986)
Q Consensus 684 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 756 (986)
....++|++.+.||+|+||.||+|.+..++ ..||+|+++... ....+.+.+|+++++++ +||||++++++|
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~-- 119 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC-- 119 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE--
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE--
Confidence 334678999999999999999999987654 479999997543 33457789999999999 899999999994
Q ss_pred cccCCCceEEEEEEeccCCCHhHhhccCCCCC----ccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCC
Q 046598 757 VDYQGNDFKALVFEFMHNRSLEEWLHPITRED----ETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPS 832 (986)
Q Consensus 757 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~ 832 (986)
..++..++||||+++|+|.+++....... ........+++.+++.++.||+.||+|||+. +|+||||||+
T Consensus 120 ---~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~ 193 (333)
T 2i1m_A 120 ---THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAAR 193 (333)
T ss_dssp ---CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred ---ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccc
Confidence 45577999999999999999996322100 0001134689999999999999999999999 9999999999
Q ss_pred CeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccc
Q 046598 833 NILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEG 911 (986)
Q Consensus 833 NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~ 911 (986)
||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||+| |..||......
T Consensus 194 NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 273 (333)
T 2i1m_A 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN 273 (333)
T ss_dssp GCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS
T ss_pred eEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh
Confidence 99999999999999999986644333333344567889999999998899999999999999999999 99998643221
Q ss_pred cccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 912 DMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. ....... ....... +...+..+.+++.+||+.||++|||++||
T Consensus 274 ~-~~~~~~~------------~~~~~~~------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l 317 (333)
T 2i1m_A 274 S-KFYKLVK------------DGYQMAQ------------------PAFAPKNIYSIMQACWALEPTHRPTFQQI 317 (333)
T ss_dssp H-HHHHHHH------------HTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred H-HHHHHHh------------cCCCCCC------------------CCCCCHHHHHHHHHHhccChhhCcCHHHH
Confidence 1 1111111 1110000 00123457889999999999999998764
No 202
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=4.9e-38 Score=343.79 Aligned_cols=252 Identities=25% Similarity=0.382 Sum_probs=193.3
Q ss_pred hcCCCCCcccccccceeEEEEEECCC---CeEEEEEEeecc-CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDG---RTTIAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
..+|++.+.||+|+||.||+|.+..+ ...||+|+++.. .....+.+.+|+.++++++||||++++++| +..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~----~~~~ 99 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC----LRSE 99 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEE----CCSS
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEE----EcCC
Confidence 35688899999999999999997543 346899998653 334457889999999999999999999986 3445
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
+..++||||+++|+|.+++.. ....+++.+++.|+.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 100 ~~~~~v~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~ 167 (298)
T 3f66_A 100 GSPLVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTV 167 (298)
T ss_dssp SCCEEEEECCTTCBHHHHHHC---------TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCE
T ss_pred CceEEEEeCCCCCCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCE
Confidence 678999999999999999962 234589999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCC--ccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHH
Q 046598 843 HIGDFGLARFLPLSSA--QTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLA 919 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~ 919 (986)
||+|||.++....... ........+|+.|+|||.+.+..++.++||||+|+++|+|++ |.+||...... ......
T Consensus 168 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~~~~ 245 (298)
T 3f66_A 168 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYL 245 (298)
T ss_dssp EECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--THHHHH
T ss_pred EECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--HHHHHH
Confidence 9999999986643221 122334557889999999999999999999999999999999 55565432211 111111
Q ss_pred HhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 920 RTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 920 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
... .....+ ..++..+.+++.+||+.||++|||++||
T Consensus 246 ~~~-----------~~~~~~-------------------~~~~~~l~~li~~~l~~~p~~Rps~~el 282 (298)
T 3f66_A 246 LQG-----------RRLLQP-------------------EYCPDPLYEVMLKCWHPKAEMRPSFSEL 282 (298)
T ss_dssp HTT-----------CCCCCC-------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred hcC-----------CCCCCC-------------------ccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 100 000000 0123457899999999999999998764
No 203
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.7e-38 Score=354.57 Aligned_cols=199 Identities=26% Similarity=0.362 Sum_probs=173.9
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc-CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
.++|++.+.||+|+||.||+|.+..+++.||+|+++.. .....+.+.+|++++++++||||+++++++ ..++..
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 106 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF-----YSDGEI 106 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEE-----EETTEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEE-----EECCEE
Confidence 46799999999999999999999988999999999754 334457789999999999999999999984 445789
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHh-cCCCCeEeecCCCCCeEecCCCcEEE
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHH-DCQPPIAHCDLKPSNILLDEDMIAHI 844 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL 844 (986)
++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||
T Consensus 107 ~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~~i~~~l~~lh~~~---~i~H~dlkp~Nil~~~~~~~kl 173 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVLKK----------AGRIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKL 173 (360)
T ss_dssp EEEECCCTTCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEE
T ss_pred EEEEECCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHhC---CEEcCCccHHHEEECCCCCEEE
Confidence 999999999999999952 2358999999999999999999998 5 8999999999999999999999
Q ss_pred cccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCc
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
+|||+++.... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 174 ~Dfg~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 174 CDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp CCCCCCHHHHH----HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred EECCCCccccc----ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999965421 122345689999999999999999999999999999999999999974
No 204
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.2e-37 Score=349.93 Aligned_cols=255 Identities=20% Similarity=0.296 Sum_probs=200.7
Q ss_pred HHHHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc--------hhHHHHHHHHHHHhcC-CCCcceeeee
Q 046598 682 NLYNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH--------GAFKSFIAECNTLKNI-RHRNLVKILT 752 (986)
Q Consensus 682 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~l~~ 752 (986)
......++|++.+.||+|+||.||+|.+..+++.||||+++.... ...+.+.+|+.+++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 344556789999999999999999999998899999999875431 1245678999999999 8999999999
Q ss_pred eccccccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCC
Q 046598 753 ACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPS 832 (986)
Q Consensus 753 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~ 832 (986)
++ ......++||||+++++|.+++.. ...+++..+..++.||+.||.|||+. ||+||||||+
T Consensus 168 ~~-----~~~~~~~lv~e~~~g~~L~~~l~~----------~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~ 229 (365)
T 2y7j_A 168 SY-----ESSSFMFLVFDLMRKGELFDYLTE----------KVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPE 229 (365)
T ss_dssp EE-----EBSSEEEEEECCCTTCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred EE-----eeCCEEEEEEEeCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHH
Confidence 84 456789999999999999999952 24689999999999999999999999 9999999999
Q ss_pred CeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccC------CCcCcccchhhHHHHHHHHHhCCCCCC
Q 046598 833 NILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG------SEVSISGDVYSYGILLLELITRKKPTD 906 (986)
Q Consensus 833 NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwSlGvvl~elltg~~pf~ 906 (986)
||+++.++.+||+|||++..+..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 230 NIl~~~~~~ikl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~ 306 (365)
T 2y7j_A 230 NILLDDNMQIRLSDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFW 306 (365)
T ss_dssp GEEECTTCCEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred HEEECCCCCEEEEecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCC
Confidence 99999999999999999987653322 234578999999998753 368899999999999999999999996
Q ss_pred ccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 907 IMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..... ............. ..+.....+.++.+++.+||+.||++|||++|+
T Consensus 307 ~~~~~--~~~~~i~~~~~~~---------------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~el 357 (365)
T 2y7j_A 307 HRRQI--LMLRMIMEGQYQF---------------------------SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQA 357 (365)
T ss_dssp CSSHH--HHHHHHHHTCCCC---------------------------CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred CCCHH--HHHHHHHhCCCCC---------------------------CCcccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 32110 0000000000000 000011234457899999999999999998764
No 205
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.3e-37 Score=344.25 Aligned_cols=251 Identities=20% Similarity=0.250 Sum_probs=194.2
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC--------chhHHHHHHHHHHHhcCCCCcceeeeeecccc
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH--------HGAFKSFIAECNTLKNIRHRNLVKILTACSGV 757 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 757 (986)
..++|.+.+.||+|+||.||+|.+..+++.||||++.... ......+.+|++++++++||||+++++++.
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-- 85 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-- 85 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE--
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc--
Confidence 4568999999999999999999999999999999986422 122345889999999999999999999852
Q ss_pred ccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEec
Q 046598 758 DYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLD 837 (986)
Q Consensus 758 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 837 (986)
. ...++||||+++++|.+++.. ...+++.+++.++.||+.||+|||++ +|+||||||+||+++
T Consensus 86 ---~-~~~~lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~ 148 (322)
T 2ycf_A 86 ---A-EDYYIVLELMEGGELFDKVVG----------NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLS 148 (322)
T ss_dssp ---S-SSEEEEEECCTTEETHHHHST----------TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEES
T ss_pred ---C-CceEEEEecCCCCcHHHHHhc----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEe
Confidence 2 338999999999999999852 34689999999999999999999999 999999999999998
Q ss_pred CCCc---EEEcccccceecCCCCCcccccccccccccccccccc---CCCcCcccchhhHHHHHHHHHhCCCCCCccccc
Q 046598 838 EDMI---AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGL---GSEVSISGDVYSYGILLLELITRKKPTDIMFEG 911 (986)
Q Consensus 838 ~~~~---~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~ 911 (986)
.++. +||+|||+++..... .......||+.|+|||++. ...++.++|||||||++|+|++|+.||......
T Consensus 149 ~~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 225 (322)
T 2ycf_A 149 SQEEDCLIKITDFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 225 (322)
T ss_dssp SSSSSCCEEECCCTTCEECCCC---HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS
T ss_pred cCCCCCeEEEccCccceecccc---cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH
Confidence 7664 999999999876422 2223456899999999863 567899999999999999999999999743222
Q ss_pred cccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 912 DMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. ............... ......+.++.+++.+||+.||++|||++|+
T Consensus 226 ~-~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~ 272 (322)
T 2ycf_A 226 V-SLKDQITSGKYNFIP---------------------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEA 272 (322)
T ss_dssp S-CHHHHHHHTCCCCCH---------------------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred H-HHHHHHHhCccccCc---------------------------hhhhhcCHHHHHHHHHHcccCHhhCCCHHHH
Confidence 1 111111111000000 0011234567899999999999999998763
No 206
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.8e-38 Score=346.20 Aligned_cols=251 Identities=20% Similarity=0.226 Sum_probs=188.5
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
..++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|+.++++++||||+++++++ ..+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~~ 106 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFG-----EID 106 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----EET
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEE-----eeC
Confidence 3578999999999999999999999889999999986532 22347789999999999999999999994 445
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
+..++||||+++++|.+++.. ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~ 173 (309)
T 2h34_A 107 GQLYVDMRLINGVDLAAMLRR----------QGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFA 173 (309)
T ss_dssp TEEEEEEECCCCEEHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCE
T ss_pred CeEEEEEEecCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCE
Confidence 789999999999999999952 23589999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
||+|||++....... ........|++.|+|||++.+..++.++||||||+++|||++|+.||...... .........
T Consensus 174 kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~ 250 (309)
T 2h34_A 174 YLVDFGIASATTDEK-LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQA 250 (309)
T ss_dssp EECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSC
T ss_pred EEecCccCccccccc-cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccC
Confidence 999999997654322 12223456899999999999999999999999999999999999999632111 011111100
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCC-CCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRM-SMTN 985 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~e 985 (986)
.+.. . ......+.++.+++.+||+.||++|| |+++
T Consensus 251 ~~~~-------------~---------------~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~ 286 (309)
T 2h34_A 251 IPRP-------------S---------------TVRPGIPVAFDAVIARGMAKNPEDRYVTCGD 286 (309)
T ss_dssp CCCG-------------G---------------GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHH
T ss_pred CCCc-------------c---------------ccCCCCCHHHHHHHHHhccCCHHHHHHhHHH
Confidence 0000 0 00012344577899999999999999 6654
No 207
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.7e-38 Score=338.00 Aligned_cols=248 Identities=27% Similarity=0.403 Sum_probs=197.3
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
.++|++.+.||+|+||.||+|.+.. ++.||+|+++.... ..+.+.+|++++++++||||+++++++ ..++..+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 79 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVC-----LEQAPIC 79 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETT-TEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSCE
T ss_pred hhheeeeeEecCCCceeEEEEEecC-CCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCCeE
Confidence 4678999999999999999999975 68899999976433 346789999999999999999999994 4457799
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEcc
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIGD 846 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 846 (986)
+||||+++++|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 80 lv~e~~~~~~L~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~d 147 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRT---------QRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSD 147 (267)
T ss_dssp EEECCCTTCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECC
T ss_pred EEEeCCCCCcHHHHHhh---------CcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcc
Confidence 99999999999999962 234589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCC
Q 046598 847 FGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLARTALPD 925 (986)
Q Consensus 847 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 925 (986)
||.++..... .........++..|+|||++.+..++.++||||+|+++|+|++ |+.||..... ......
T Consensus 148 fg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~---- 217 (267)
T 3t9t_A 148 FGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVED---- 217 (267)
T ss_dssp TTGGGGBCCH-HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHH----
T ss_pred cccccccccc-cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-----HHHHHH----
Confidence 9999865322 1122233457789999999998899999999999999999999 8999863211 111110
Q ss_pred chhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 926 HVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 926 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+........+ ...+..+.+++.+||+.||++|||++|+
T Consensus 218 ----i~~~~~~~~~-------------------~~~~~~l~~li~~~l~~~p~~Rps~~~l 255 (267)
T 3t9t_A 218 ----ISTGFRLYKP-------------------RLASTHVYQIMNHCWRERPEDRPAFSRL 255 (267)
T ss_dssp ----HHTTCCCCCC-------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ----HhcCCcCCCC-------------------ccCcHHHHHHHHHHccCChhhCcCHHHH
Confidence 0000000000 0123457799999999999999998764
No 208
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.7e-37 Score=374.50 Aligned_cols=245 Identities=21% Similarity=0.255 Sum_probs=200.2
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc---CchhHHHHHHHHHHHhcC-CCCcceeeeeeccccccCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL---HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQG 761 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 761 (986)
..++|++.+.||+|+||.||+|++..+++.||||+++.. .....+.+..|.+++..+ +||+|++++++ +++
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~-----~~~ 413 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSC-----FQT 413 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEE-----CBC
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE-----EEe
Confidence 356799999999999999999999999999999999742 234456788999999988 79999999998 566
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI 841 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 841 (986)
.+..|+||||+++|+|.++++. .+.+++.+++.|+.||+.||+|||++ +|+||||||+|||++.+++
T Consensus 414 ~~~~~lV~E~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ 480 (674)
T 3pfq_A 414 MDRLYFVMEYVNGGDLMYHIQQ----------VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGH 480 (674)
T ss_dssp SSEEEEEEECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSC
T ss_pred CCEEEEEEeCcCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCc
Confidence 7889999999999999999952 24689999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHh
Q 046598 842 AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLART 921 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 921 (986)
+||+|||+|+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 481 ikL~DFGla~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-----~~~~~- 552 (674)
T 3pfq_A 481 IKIADFGMCKENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELFQ- 552 (674)
T ss_dssp EEECCCTTCEECCCTT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH-
T ss_pred EEEeecceeeccccCC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-----HHHHH-
Confidence 9999999998643222 223456799999999999999999999999999999999999999963211 11111
Q ss_pred hCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCC
Q 046598 922 ALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSM 983 (986)
Q Consensus 922 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 983 (986)
..+.....- +...+.++.+++.+||+.||++||++
T Consensus 553 -----------~i~~~~~~~----------------p~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 553 -----------SIMEHNVAY----------------PKSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp -----------HHHSSCCCC----------------CTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred -----------HHHhCCCCC----------------CccCCHHHHHHHHHHccCCHHHCCCC
Confidence 111110000 00223457799999999999999997
No 209
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.8e-38 Score=349.97 Aligned_cols=278 Identities=23% Similarity=0.275 Sum_probs=193.9
Q ss_pred HHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCch-----hHHHHHHHHHHHhcCCCCcceeeeeeccccc
Q 046598 684 YNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHG-----AFKSFIAECNTLKNIRHRNLVKILTACSGVD 758 (986)
Q Consensus 684 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 758 (986)
....++|++.+.||+|+||.||+|++..+++.||||+++..... ..+.+.+|++++++++||||+++++++
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~---- 81 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF---- 81 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEE----
Confidence 34567899999999999999999999988999999998643221 135688999999999999999999994
Q ss_pred cCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecC
Q 046598 759 YQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDE 838 (986)
Q Consensus 759 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 838 (986)
......++||||+++ +|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 82 -~~~~~~~lv~e~~~~-~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~ 147 (346)
T 1ua2_A 82 -GHKSNISLVFDFMET-DLEVIIKD---------NSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDE 147 (346)
T ss_dssp -CCTTCCEEEEECCSE-EHHHHHTT---------CCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred -eeCCceEEEEEcCCC-CHHHHHHh---------cCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcC
Confidence 456789999999975 89988852 234588889999999999999999999 9999999999999999
Q ss_pred CCcEEEcccccceecCCCCCccccccccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCccccccccHHH
Q 046598 839 DMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGS-EVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHN 917 (986)
Q Consensus 839 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~ 917 (986)
++.+||+|||+++...... .......+|+.|+|||++.+. .++.++|||||||++|||++|.+||......+ .+..
T Consensus 148 ~~~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~~~ 224 (346)
T 1ua2_A 148 NGVLKLADFGLAKSFGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTR 224 (346)
T ss_dssp TCCEEECCCGGGSTTTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH
T ss_pred CCCEEEEecccceeccCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHH
Confidence 9999999999998654222 223345689999999998764 58999999999999999999999986432211 1111
Q ss_pred HHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 918 LARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 918 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
............+.+. ...+.. +........ .........+.++.+++.+||+.||++|||++|+
T Consensus 225 i~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 289 (346)
T 1ua2_A 225 IFETLGTPTEEQWPDM--CSLPDY-VTFKSFPGI-PLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA 289 (346)
T ss_dssp HHHHHCCCCTTTSSST--TSSTTC-CCCCCCCCC-CHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHH
T ss_pred HHHHcCCCChhhhhhh--ccCccc-ccccccCCC-ChHHhhccCCHHHHHHHHHHhccChhhCCCHHHH
Confidence 1111100000000000 000000 000000000 0000011234568899999999999999998764
No 210
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-38 Score=348.67 Aligned_cols=251 Identities=22% Similarity=0.426 Sum_probs=190.3
Q ss_pred hcCCCCCcccccccceeEEEEEECCC----CeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDG----RTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 761 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 761 (986)
.++|.+.+.||+|+||.||+|.+..+ +..||||+++... ......+.+|++++++++||||+++++++ ..
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~ 117 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVI-----SK 117 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----CS
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----ec
Confidence 35677889999999999999998653 3469999997543 33456789999999999999999999994 45
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI 841 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 841 (986)
.+..++||||+++++|.+++.. ....+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 118 ~~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~ 185 (333)
T 1mqb_A 118 YKPMMIITEYMENGALDKFLRE---------KDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLV 185 (333)
T ss_dssp SSSEEEEEECCTTEEHHHHHHH---------TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCC
T ss_pred CCCcEEEEeCCCCCcHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCc
Confidence 6789999999999999999962 234689999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceecCCCCCc-cccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHH
Q 046598 842 AHIGDFGLARFLPLSSAQ-TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLA 919 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~ 919 (986)
+||+|||+++........ .......+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ....
T Consensus 186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-----~~~~ 260 (333)
T 1mqb_A 186 CKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-----HEVM 260 (333)
T ss_dssp EEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHH
T ss_pred EEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH-----HHHH
Confidence 999999999876433221 12223446789999999999999999999999999999999 9999863221 1111
Q ss_pred HhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 920 RTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 920 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. .+...... + ....++.++.+++.+||+.||++||+++||
T Consensus 261 ~---------~~~~~~~~-~-----------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 300 (333)
T 1mqb_A 261 K---------AINDGFRL-P-----------------TPMDCPSAIYQLMMQCWQQERARRPKFADI 300 (333)
T ss_dssp H---------HHHTTCCC-C-----------------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred H---------HHHCCCcC-C-----------------CcccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 1 00000000 0 001234567899999999999999998764
No 211
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=7.3e-39 Score=362.19 Aligned_cols=250 Identities=15% Similarity=0.132 Sum_probs=188.6
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeec---cCchhHHHHHHHH---HHHhcCCCCcceeeeeeccccc--
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNL---LHHGAFKSFIAEC---NTLKNIRHRNLVKILTACSGVD-- 758 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~---~~~~~~~~~~~E~---~~l~~l~h~niv~l~~~~~~~~-- 758 (986)
.++|.+.+.||+|+||+||+|++..+++.||||+++. ......+.+.+|+ +++++++||||+++++.+....
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 4679999999999999999999988899999999973 3334567889999 4555668999999985432100
Q ss_pred cCCCc-----------------eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCC
Q 046598 759 YQGND-----------------FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQ 821 (986)
Q Consensus 759 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ 821 (986)
+..++ ..|+||||+ +|+|.+++...... ......+++..++.|+.||+.||+|||++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~---~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-- 225 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSH---SSTHKSLVHHARLQLTLQVIRLLASLHHY-- 225 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHT---TTTTHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhcccc---ccccccccHHHHHHHHHHHHHHHHHHHhC--
Confidence 11111 378999999 68999999643211 11224566789999999999999999999
Q ss_pred CCeEeecCCCCCeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccCC-----------CcCcccchhh
Q 046598 822 PPIAHCDLKPSNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGS-----------EVSISGDVYS 890 (986)
Q Consensus 822 ~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwS 890 (986)
+|+||||||+|||++.++.+||+|||+|+.... ......| +.|+|||++.+. .++.++||||
T Consensus 226 -~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwS 298 (377)
T 3byv_A 226 -GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWA 298 (377)
T ss_dssp -TEECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHH
T ss_pred -CeecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHH
Confidence 999999999999999999999999999986321 2234557 999999999887 8999999999
Q ss_pred HHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHh
Q 046598 891 YGILLLELITRKKPTDIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGV 970 (986)
Q Consensus 891 lGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 970 (986)
|||++|||++|+.||........ ...+.. .+ ...+.++.+++.
T Consensus 299 lG~il~elltg~~Pf~~~~~~~~-------------~~~~~~-----~~-------------------~~~~~~~~~li~ 341 (377)
T 3byv_A 299 LGLVIYWIWCADLPITKDAALGG-------------SEWIFR-----SC-------------------KNIPQPVRALLE 341 (377)
T ss_dssp HHHHHHHHHHSSCCC------CC-------------SGGGGS-----SC-------------------CCCCHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCcccccccc-------------hhhhhh-----hc-------------------cCCCHHHHHHHH
Confidence 99999999999999963221110 000000 00 012345779999
Q ss_pred cccCCCCCCCCCCCCC
Q 046598 971 ACSMESPEDRMSMTNV 986 (986)
Q Consensus 971 ~Cl~~dP~~RPt~~eV 986 (986)
+||+.||++|||+.|+
T Consensus 342 ~~L~~dp~~Rpt~~e~ 357 (377)
T 3byv_A 342 GFLRYPKEDRLLPLQA 357 (377)
T ss_dssp HHTCSSGGGCCCHHHH
T ss_pred HHcCCCchhCCCHHHH
Confidence 9999999999998764
No 212
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=343.18 Aligned_cols=250 Identities=23% Similarity=0.298 Sum_probs=195.3
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
..++|++.+.||+|+||.||+|.+..+++.||||++.... ..+.+.+|++++++++||||+++++++ ......
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 99 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSY-----FKNTDL 99 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEE-----EETTEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEE-----EeCCEE
Confidence 4578999999999999999999999889999999997543 346789999999999999999999985 345789
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEc
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIG 845 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 845 (986)
++||||+++++|.+++. .....+++.++..++.|++.||.|||+. +++||||||+||+++.++.+||+
T Consensus 100 ~lv~e~~~~~~L~~~~~---------~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 167 (314)
T 3com_A 100 WIVMEYCGAGSVSDIIR---------LRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLA 167 (314)
T ss_dssp EEEEECCTTEEHHHHHH---------HHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEEC
T ss_pred EEEeecCCCCCHHHHHH---------hcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEe
Confidence 99999999999999985 2234689999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCC
Q 046598 846 DFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALPD 925 (986)
Q Consensus 846 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 925 (986)
|||.+....... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||....... .........+.
T Consensus 168 dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~ 243 (314)
T 3com_A 168 DFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR--AIFMIPTNPPP 243 (314)
T ss_dssp CCTTCEECBTTB--SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCC
T ss_pred ecccchhhhhhc--cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHhcCCCc
Confidence 999998764321 22234568999999999999999999999999999999999999986322110 00000000000
Q ss_pred chhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 926 HVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 926 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. . ......+.++.+++.+||+.||++|||++|+
T Consensus 244 ~------------~----------------~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~l 276 (314)
T 3com_A 244 T------------F----------------RKPELWSDNFTDFVKQCLVKSPEQRATATQL 276 (314)
T ss_dssp C------------C----------------SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred c------------c----------------CCcccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 0 0 0001123457799999999999999998763
No 213
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6.4e-38 Score=337.77 Aligned_cols=246 Identities=23% Similarity=0.325 Sum_probs=193.3
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC--chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.++|++.+.||+|+||.||+|++. ++.||||+++... ....+.+.+|+.++++++||||+++++++.. .....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~ 83 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS---PPAPH 83 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECT---TTSSS
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEcc---CCCCC
Confidence 467999999999999999999996 6889999997532 3445679999999999999999999999632 22367
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeecCCCCCeEecCCCcE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPP--IAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~ 842 (986)
.++||||+++|+|.+++.... ...+++.+++.|+.|++.||+|||+. + |+||||||+||+++.++.+
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~ 152 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGT--------NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTA 152 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCS--------SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCE
T ss_pred eEeeecccCCCcHHHHHhhcc--------cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcce
Confidence 899999999999999996321 23589999999999999999999998 7 9999999999999999999
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccCCCcCc---ccchhhHHHHHHHHHhCCCCCCccccccccHHHHH
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSI---SGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLA 919 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~ 919 (986)
+|+|||++..... ....||+.|+|||++.+..++. ++|||||||++|||++|+.||....... ..
T Consensus 153 ~l~~~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~ 220 (271)
T 3kmu_A 153 RISMADVKFSFQS-------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME-----IG 220 (271)
T ss_dssp EEEGGGSCCTTSC-------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH-----HH
T ss_pred eEEeccceeeecc-------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH-----HH
Confidence 9999998754321 2245899999999998765554 7999999999999999999996332211 10
Q ss_pred HhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 920 RTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 920 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. ........... +...+.++.+++.+||+.||++|||++||
T Consensus 221 ~--------~~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~i 261 (271)
T 3kmu_A 221 M--------KVALEGLRPTI------------------PPGISPHVSKLMKICMNEDPAKRPKFDMI 261 (271)
T ss_dssp H--------HHHHSCCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred H--------HHHhcCCCCCC------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 0 00000000000 01234457899999999999999998764
No 214
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.9e-37 Score=364.22 Aligned_cols=250 Identities=22% Similarity=0.296 Sum_probs=197.1
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc-------------hhHHHHHHHHHHHhcCCCCcceeeee
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH-------------GAFKSFIAECNTLKNIRHRNLVKILT 752 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~ 752 (986)
..++|.+.++||+|+||+||+|++..+++.||||+++.... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 46789999999999999999999999999999999874321 23467899999999999999999999
Q ss_pred eccccccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCC
Q 046598 753 ACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPS 832 (986)
Q Consensus 753 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~ 832 (986)
+ +.++...++||||+++|+|.+++.. ...+++.++..|+.||+.||+|||+. +|+||||||+
T Consensus 114 ~-----~~~~~~~~lv~e~~~gg~L~~~l~~----------~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~ 175 (504)
T 3q5i_A 114 V-----FEDKKYFYLVTEFYEGGELFEQIIN----------RHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPE 175 (504)
T ss_dssp E-----EECSSEEEEEEECCTTCBHHHHHHH----------HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred E-----EEcCCEEEEEEecCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHH
Confidence 9 4566889999999999999999842 24689999999999999999999999 9999999999
Q ss_pred CeEecCCC---cEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccc
Q 046598 833 NILLDEDM---IAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMF 909 (986)
Q Consensus 833 NIll~~~~---~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~ 909 (986)
||+++.++ .+||+|||+++...... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||....
T Consensus 176 Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 251 (504)
T 3q5i_A 176 NILLENKNSLLNIKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN 251 (504)
T ss_dssp GEEESSTTCCSSEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEEecCCCCccEEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99998776 69999999998764332 223456999999999987 469999999999999999999999996322
Q ss_pred cccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 910 EGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.. .... ......... ..+.....+.++.+++.+|++.||++|||++|+
T Consensus 252 ~~-----~~~~------------~i~~~~~~~------------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~ 299 (504)
T 3q5i_A 252 DQ-----DIIK------------KVEKGKYYF------------DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEA 299 (504)
T ss_dssp HH-----HHHH------------HHHHCCCCC------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HH-----HHHH------------HHHcCCCCC------------CccccCCCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 11 1111 000000000 000111234567899999999999999998763
No 215
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=9.7e-38 Score=365.19 Aligned_cols=250 Identities=26% Similarity=0.292 Sum_probs=197.2
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
..++|++.+.||+|+||+||+|++..+++.||||++... .......+.+|++++++++||||++++++ +....
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~-----~~~~~ 94 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI-----LEDSS 94 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEE-----EECSS
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEE-----EEcCC
Confidence 457899999999999999999999988999999998642 23345788999999999999999999999 45568
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEec---CCC
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLD---EDM 840 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~ 840 (986)
..++||||+++|+|.+++.. ...+++.++..|+.||+.||.|||+. +|+||||||+||+++ .++
T Consensus 95 ~~~lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 161 (486)
T 3mwu_A 95 SFYIVGELYTGGELFDEIIK----------RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDC 161 (486)
T ss_dssp EEEEEECCCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTC
T ss_pred EEEEEEEcCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCC
Confidence 89999999999999998842 24689999999999999999999999 999999999999995 456
Q ss_pred cEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHH
Q 046598 841 IAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 841 ~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~ 920 (986)
.+||+|||+++...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||......+ .......
T Consensus 162 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~ 236 (486)
T 3mwu_A 162 DIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRVET 236 (486)
T ss_dssp CEEECSCSCTTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred CEEEEECCcCeECCCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHh
Confidence 89999999998654322 2334569999999999876 59999999999999999999999996321110 0001100
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..... .. +.....+.++.+++.+||+.||++|||+.|+
T Consensus 237 ~~~~~------------~~----------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~ 274 (486)
T 3mwu_A 237 GKYAF------------DL----------------PQWRTISDDAKDLIRKMLTFHPSLRITATQC 274 (486)
T ss_dssp TCCCS------------CS----------------GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CCCCC------------CC----------------cccCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 00000 00 0001234457799999999999999998763
No 216
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=6.6e-38 Score=344.78 Aligned_cols=256 Identities=21% Similarity=0.316 Sum_probs=190.1
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc---CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
..++|++.+.||+|+||.||+|.+..+++.||||+++.. .....+++.+|++++++++||||+++++++ ..+
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~ 104 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASF-----IED 104 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EET
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcC
Confidence 346799999999999999999999888999999999742 334457789999999999999999999995 345
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
+..++||||+++++|.+++.... .....+++.+++.++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 105 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~ 175 (310)
T 2wqm_A 105 NELNIVLELADAGDLSRMIKHFK------KQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVV 175 (310)
T ss_dssp TEEEEEEECCCSCBHHHHHHHHH------HTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred CcEEEEEecCCCCCHHHHHHHhc------ccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCE
Confidence 78999999999999999985321 1234689999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
||+|||+++...... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... ........
T Consensus 176 kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~ 250 (310)
T 2wqm_A 176 KLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKI 250 (310)
T ss_dssp EECCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC---HHHHHHHH
T ss_pred EEEeccceeeecCCC--ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh---HHHHHHHh
Confidence 999999997654322 2223356899999999999999999999999999999999999998632211 11111100
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
........+ ....+.++.+++.+||+.||++|||++||
T Consensus 251 --------~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~i 288 (310)
T 2wqm_A 251 --------EQCDYPPLP------------------SDHYSEELRQLVNMCINPDPEKRPDVTYV 288 (310)
T ss_dssp --------HTTCSCCCC------------------TTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred --------hcccCCCCc------------------ccccCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 000000000 00223467899999999999999998764
No 217
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.6e-39 Score=354.82 Aligned_cols=267 Identities=23% Similarity=0.330 Sum_probs=180.5
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhc--CCCCcceeeeeeccccccCCCce
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKN--IRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.++|.+.+.||+|+||.||+|++. ++.||||+++.. ....+.+|.+++.. ++||||+++++++... ......
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD-NGTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT--TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEE-CSSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc--CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccC-CCccce
Confidence 468999999999999999999875 688999998643 34567788888887 7999999999996432 112237
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEeecCCCCCeEe
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLH--------HDCQPPIAHCDLKPSNILL 836 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~~ivH~Dlkp~NIll 836 (986)
.++||||+++|+|.++++. ..+++.+++.++.|++.||+||| +. +|+||||||+||++
T Consensus 76 ~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~ 141 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNR-----------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILV 141 (303)
T ss_dssp EEEEEECCTTCCHHHHHHH-----------CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-C
T ss_pred eEEEEeccCCCCHHHHHhc-----------cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEE
Confidence 8999999999999999952 24777889999999999999999 77 99999999999999
Q ss_pred cCCCcEEEcccccceecCCCCCcc--ccccccccccccccccccCC------CcCcccchhhHHHHHHHHHhCCCCCCcc
Q 046598 837 DEDMIAHIGDFGLARFLPLSSAQT--SSIGAKGSIGYIAPEYGLGS------EVSISGDVYSYGILLLELITRKKPTDIM 908 (986)
Q Consensus 837 ~~~~~~kL~DFG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwSlGvvl~elltg~~pf~~~ 908 (986)
+.++.+||+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||++|..|+...
T Consensus 142 ~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~ 221 (303)
T 3gxj_A 142 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 221 (303)
T ss_dssp CTTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC
T ss_pred CCCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCcccc
Confidence 999999999999997654332221 12334699999999998876 5567899999999999999995444321
Q ss_pred ccccccHHHHHHh--hCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 909 FEGDMNLHNLART--ALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 909 ~~~~~~~~~~~~~--~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
......+...... ........+..........+ +. ...+++..+.+++.+||+.||++|||++||
T Consensus 222 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~~i 288 (303)
T 3gxj_A 222 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPN------------RW-QSCEALRVMAKIMRECWYANGAARLTALRI 288 (303)
T ss_dssp -CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCG------------GG-GSSHHHHHHHHHHHTTCCSSGGGSCCHHHH
T ss_pred ceeeccccccCCCCccHHHHHHHHHHhhcCCCccc------------cc-cchhhHHHHHHHHHHHhccCcccCCCHHHH
Confidence 1111111100000 00001111111111111111 11 112566778999999999999999998764
No 218
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=6.5e-38 Score=353.02 Aligned_cols=207 Identities=14% Similarity=0.139 Sum_probs=174.0
Q ss_pred HhhcCCCCCcccccccceeEEEEE-----ECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCC---CCcceeeeeeccc
Q 046598 685 NATDRFSSVNQIGEGSFGSVFKGI-----LDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIR---HRNLVKILTACSG 756 (986)
Q Consensus 685 ~~~~~y~~~~~lg~G~~g~Vy~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~ 756 (986)
...++|.+.+.||+|+||+||+|. ...+++.||||+++... ..++.+|+++++.++ |+||+++++++
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~-- 136 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAH-- 136 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEE--
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheee--
Confidence 345789999999999999999994 55668899999987543 356677777777775 99999999994
Q ss_pred cccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEe
Q 046598 757 VDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILL 836 (986)
Q Consensus 757 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 836 (986)
..++..++||||+++|+|.+++..... .....+++.+++.|+.||+.||+|||+. +|+||||||+|||+
T Consensus 137 ---~~~~~~~lv~e~~~~g~L~~~l~~~~~-----~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll 205 (365)
T 3e7e_A 137 ---LFQNGSVLVGELYSYGTLLNAINLYKN-----TPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFIL 205 (365)
T ss_dssp ---ECSSCEEEEECCCCSCBHHHHHHHHHT-----STTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEE
T ss_pred ---ecCCCcEEEEeccCCCcHHHHHHHhhc-----ccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEe
Confidence 455788999999999999999963221 1235699999999999999999999999 99999999999999
Q ss_pred cC-----------CCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCC
Q 046598 837 DE-----------DMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPT 905 (986)
Q Consensus 837 ~~-----------~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf 905 (986)
+. ++.+||+|||+|+.+.............||+.|+|||++.+..++.++|||||||++|||+||+.||
T Consensus 206 ~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf 285 (365)
T 3e7e_A 206 GNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMK 285 (365)
T ss_dssp CGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCC
T ss_pred cccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcc
Confidence 98 8999999999998654333344445567999999999999999999999999999999999999998
Q ss_pred Cc
Q 046598 906 DI 907 (986)
Q Consensus 906 ~~ 907 (986)
..
T Consensus 286 ~~ 287 (365)
T 3e7e_A 286 VK 287 (365)
T ss_dssp EE
T ss_pred cc
Confidence 64
No 219
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.4e-38 Score=349.32 Aligned_cols=259 Identities=24% Similarity=0.367 Sum_probs=198.1
Q ss_pred cCC-CCCcccccccceeEEEEEE----CCCCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCC
Q 046598 688 DRF-SSVNQIGEGSFGSVFKGIL----DDGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 761 (986)
Q Consensus 688 ~~y-~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 761 (986)
++| ++.+.||+|+||+||++.+ ..+++.||||+++... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~ 106 (318)
T 3lxp_A 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED---AG 106 (318)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---TT
T ss_pred HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEec---CC
Confidence 345 8999999999999988765 3468899999997543 2445778999999999999999999999642 23
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI 841 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 841 (986)
....++||||+++++|.+++.. ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~-----------~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~ 172 (318)
T 3lxp_A 107 AASLQLVMEYVPLGSLRDYLPR-----------HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRL 172 (318)
T ss_dssp TTEEEEEECCCTTCBHHHHGGG-----------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred CceEEEEEecccCCcHHHHHhh-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCC
Confidence 4678999999999999999952 2489999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceecCCCCCc-cccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHH
Q 046598 842 AHIGDFGLARFLPLSSAQ-TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~ 920 (986)
+||+|||.++........ .......++..|+|||++.+..++.++|||||||++|+|++|+.||....... ...
T Consensus 173 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~-----~~~ 247 (318)
T 3lxp_A 173 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF-----LEL 247 (318)
T ss_dssp EEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH-----HHH
T ss_pred EEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhh-----hhh
Confidence 999999999877543322 22334557888999999999999999999999999999999999986321110 000
Q ss_pred hhCCCc------hhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDH------VMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~------~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
...... ..+.++..... +....++.++.+++.+||+.||++|||++||
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~el 301 (318)
T 3lxp_A 248 IGIAQGQMTVLRLTELLERGERL------------------PRPDKCPAEVYHLMKNCWETEASFRPTFENL 301 (318)
T ss_dssp HCSCCHHHHHHHHHHHHHTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred hcccccchhHHHHHHHHhcccCC------------------CCCccccHHHHHHHHHHcCCCcccCcCHHHH
Confidence 011110 11111111100 0111345678899999999999999998764
No 220
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.1e-37 Score=339.42 Aligned_cols=246 Identities=19% Similarity=0.241 Sum_probs=195.1
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcC-CCCcceeeeeeccccccCCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 762 (986)
..++|++.+.||+|+||+||+|.+..+++.||||+++.. ......++.+|+..+..+ +||||+++++++ ..+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~-----~~~ 83 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAW-----AED 83 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEE-----EET
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeee-----ecC
Confidence 457899999999999999999999988999999999753 334457788999999999 999999999994 455
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCC---
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDED--- 839 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--- 839 (986)
+..++||||+++++|.+++.... .....+++.+++.|+.||+.||+|||++ +|+||||||+||+++.+
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~ 154 (289)
T 1x8b_A 84 DHMLIQNEYCNGGSLADAISENY------RIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIP 154 (289)
T ss_dssp TEEEEEEECCTTCBHHHHHHHHH------HHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----
T ss_pred CeEEEEEEecCCCcHHHHHHhhc------ccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCC
Confidence 78999999999999999996321 1124689999999999999999999999 99999999999999844
Q ss_pred ----------------CcEEEcccccceecCCCCCccccccccccccccccccccCC-CcCcccchhhHHHHHHHHHhCC
Q 046598 840 ----------------MIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGS-EVSISGDVYSYGILLLELITRK 902 (986)
Q Consensus 840 ----------------~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvvl~elltg~ 902 (986)
..+||+|||.+....... ...||+.|+|||++.+. .+++++|||||||++|+|++|.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~ 228 (289)
T 1x8b_A 155 NAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAE 228 (289)
T ss_dssp ---------------CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccccccccccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCC
Confidence 479999999998764322 23589999999998876 6778999999999999999999
Q ss_pred CCCCccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 046598 903 KPTDIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMS 982 (986)
Q Consensus 903 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt 982 (986)
+|+... ......... .....+. ..+.++.+++.+||+.||++|||
T Consensus 229 ~~~~~~----~~~~~~~~~------------~~~~~~~-------------------~~~~~~~~li~~~l~~dp~~Rps 273 (289)
T 1x8b_A 229 PLPRNG----DQWHEIRQG------------RLPRIPQ-------------------VLSQEFTELLKVMIHPDPERRPS 273 (289)
T ss_dssp CCCSSS----HHHHHHHTT------------CCCCCSS-------------------CCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCcch----hHHHHHHcC------------CCCCCCc-------------------ccCHHHHHHHHHHhCCCcccCCC
Confidence 876421 111111111 1100000 12345789999999999999999
Q ss_pred CCCC
Q 046598 983 MTNV 986 (986)
Q Consensus 983 ~~eV 986 (986)
++|+
T Consensus 274 ~~~l 277 (289)
T 1x8b_A 274 AMAL 277 (289)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 221
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4.2e-38 Score=349.10 Aligned_cols=258 Identities=24% Similarity=0.391 Sum_probs=194.4
Q ss_pred hhcCCCCCcccccccceeEEEEE-----ECCCCeEEEEEEeecc-CchhHHHHHHHHHHHhcCCCCcceeeeeecccccc
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGI-----LDDGRTTIAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 759 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~-----~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 759 (986)
..++|++.+.||+|+||.||+|+ ...+++.||||++... ......++.+|+.++++++||||+++++++
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~----- 102 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS----- 102 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEE-----
Confidence 35789999999999999999999 4456788999998643 334456789999999999999999999994
Q ss_pred CCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecC-
Q 046598 760 QGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDE- 838 (986)
Q Consensus 760 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~- 838 (986)
......++||||+++++|.+++...... ......+++.+++.++.||+.||.|||+. +|+||||||+||+++.
T Consensus 103 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~ 176 (327)
T 2yfx_A 103 LQSLPRFILMELMAGGDLKSFLRETRPR---PSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP 176 (327)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHTSCC---SSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCS
T ss_pred cCCCCcEEEEecCCCCcHHHHHHhhccc---ccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecC
Confidence 4556789999999999999999754322 12234689999999999999999999999 9999999999999984
Q ss_pred --CCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccH
Q 046598 839 --DMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNL 915 (986)
Q Consensus 839 --~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~ 915 (986)
+..+||+|||+++...............+++.|+|||++.+..++.++|||||||++|+|+| |+.||.....
T Consensus 177 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----- 251 (327)
T 2yfx_A 177 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN----- 251 (327)
T ss_dssp STTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred CCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH-----
Confidence 44699999999976543333333334567899999999988899999999999999999998 9999863211
Q ss_pred HHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 916 HNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 916 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..... .+.......+. ..++..+.+++.+||+.||++|||++||
T Consensus 252 ~~~~~---------~~~~~~~~~~~------------------~~~~~~l~~li~~~l~~dp~~Rps~~~l 295 (327)
T 2yfx_A 252 QEVLE---------FVTSGGRMDPP------------------KNCPGPVYRIMTQCWQHQPEDRPNFAII 295 (327)
T ss_dssp HHHHH---------HHHTTCCCCCC------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHH---------HHhcCCCCCCC------------------CCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 11110 01000000000 1233457899999999999999998764
No 222
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.5e-38 Score=339.38 Aligned_cols=250 Identities=23% Similarity=0.361 Sum_probs=197.2
Q ss_pred hcCCCCCc-ccccccceeEEEEEEC--CCCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 687 TDRFSSVN-QIGEGSFGSVFKGILD--DGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 687 ~~~y~~~~-~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
.++|.+.+ .||+|+||.||+|.+. .+++.||||+++... ....+++.+|++++++++||||+++++++. .
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~ 81 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ------A 81 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE------S
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec------C
Confidence 45677776 9999999999999864 457889999997643 345678999999999999999999999852 3
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
+..++||||+++++|.+++.. ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~ 149 (287)
T 1u59_A 82 EALMLVMEMAGGGPLHKFLVG---------KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYA 149 (287)
T ss_dssp SSEEEEEECCTTEEHHHHHTT---------CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEE
T ss_pred CCcEEEEEeCCCCCHHHHHHh---------CCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCE
Confidence 458999999999999999952 234689999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCc-cccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHH
Q 046598 843 HIGDFGLARFLPLSSAQ-TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~ 920 (986)
||+|||+++........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .......
T Consensus 150 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~i~ 227 (287)
T 1u59_A 150 KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIE 227 (287)
T ss_dssp EECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHHH
T ss_pred EECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHh
Confidence 99999999876533322 22233456889999999988899999999999999999999 99999643211 1111111
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. ..... .+..++.++.+++.+||+.||++|||++||
T Consensus 228 ~------------~~~~~------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 263 (287)
T 1u59_A 228 Q------------GKRME------------------CPPECPPELYALMSDCWIYKWEDRPDFLTV 263 (287)
T ss_dssp T------------TCCCC------------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred c------------CCcCC------------------CCCCcCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 0 00000 001234568899999999999999998764
No 223
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-37 Score=340.30 Aligned_cols=251 Identities=22% Similarity=0.345 Sum_probs=192.8
Q ss_pred CCCCCcccccccceeEEEEEECCCC---eEEEEEEeeccCc-hhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 689 RFSSVNQIGEGSFGSVFKGILDDGR---TTIAVKVFNLLHH-GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 689 ~y~~~~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.|.+.+.||+|+||+||+|.+..++ ..||+|+++.... ...+.+.+|++++++++||||+++++++. ..+..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~ 97 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIML----PPEGL 97 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC----CSSSC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEe----cCCCC
Confidence 4666789999999999999975443 3799999875333 44578899999999999999999999953 23345
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHI 844 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 844 (986)
.++||||+.+|+|.+++.. ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 98 ~~~v~e~~~~~~L~~~~~~---------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl 165 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRS---------PQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKV 165 (298)
T ss_dssp CEEEECCCTTCBHHHHHHC---------TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEE
T ss_pred cEEEEecccCCCHHHHHhc---------cccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEe
Confidence 5999999999999999963 234689999999999999999999999 9999999999999999999999
Q ss_pred cccccceecCCCCC--ccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 845 GDFGLARFLPLSSA--QTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 845 ~DFG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
+|||+++....... ........+++.|+|||.+.+..++.++|||||||++|+|++|..|+...... ..........
T Consensus 166 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-~~~~~~~~~~ 244 (298)
T 3pls_A 166 ADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-FDLTHFLAQG 244 (298)
T ss_dssp CCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-GGHHHHHHTT
T ss_pred CcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-HHHHHHhhcC
Confidence 99999986533221 12223456788999999999999999999999999999999966554321111 1111111110
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
... ..+ ...+.++.+++.+||+.||++|||++||
T Consensus 245 ~~~-----------~~~-------------------~~~~~~l~~li~~~l~~~p~~Rps~~~l 278 (298)
T 3pls_A 245 RRL-----------PQP-------------------EYCPDSLYQVMQQCWEADPAVRPTFRVL 278 (298)
T ss_dssp CCC-----------CCC-------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCC-----------CCC-------------------ccchHHHHHHHHHHccCChhhCcCHHHH
Confidence 000 000 0123457899999999999999998763
No 224
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=350.22 Aligned_cols=268 Identities=25% Similarity=0.390 Sum_probs=202.0
Q ss_pred hcCCCCCcccccccceeEEEEEE----CCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGIL----DDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
.++|++.+.||+|+||.||+|++ ..+++.||||++........+.+.+|++++++++||||+++++++.. ...
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGR 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEe---cCC
Confidence 45789999999999999999994 55689999999987666667889999999999999999999998532 233
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
...++||||+++++|.+++.. ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 184 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQK---------HKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRV 184 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHH---------STTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEE
T ss_pred CceEEEEECCCCCCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcE
Confidence 478999999999999999963 224589999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCc-cccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHh
Q 046598 843 HIGDFGLARFLPLSSAQ-TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLART 921 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 921 (986)
||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||+||..||..... .+......
T Consensus 185 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~---~~~~~~~~ 261 (326)
T 2w1i_A 185 KIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA---EFMRMIGN 261 (326)
T ss_dssp EECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH---HHHHHHCT
T ss_pred EEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH---HHHHhhcc
Confidence 99999999876543322 112334577889999999988999999999999999999999998752211 01111100
Q ss_pred hCCCc-hhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 922 ALPDH-VMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 922 ~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..... ....+...+.... +.+....++.++.+++.+||+.||++|||++||
T Consensus 262 ~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el 313 (326)
T 2w1i_A 262 DKQGQMIVFHLIELLKNNG--------------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 313 (326)
T ss_dssp TCCTHHHHHHHHHHHHTTC--------------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred ccchhhhHHHHHHHhhcCC--------------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHH
Confidence 00000 0000000000000 000111345668899999999999999998764
No 225
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.7e-37 Score=343.97 Aligned_cols=268 Identities=23% Similarity=0.334 Sum_probs=202.0
Q ss_pred cChHHHHHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhc--CCCCcceeeeeecc
Q 046598 678 ISYQNLYNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKN--IRHRNLVKILTACS 755 (986)
Q Consensus 678 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~ 755 (986)
.+........++|.+.+.||+|+||.||+|++. ++.||||++... ..+.+.+|++++.. ++||||+++++++.
T Consensus 32 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~ 106 (342)
T 1b6c_B 32 LPLLVQRTIARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADN 106 (342)
T ss_dssp SCHHHHHHHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEE
T ss_pred CceeecccccccEEEEeeecCCCCcEEEEEEEc--CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeec
Confidence 344444556789999999999999999999985 689999998643 34667888888887 79999999999964
Q ss_pred ccccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEee
Q 046598 756 GVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLH--------HDCQPPIAHC 827 (986)
Q Consensus 756 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~~ivH~ 827 (986)
.. .......++||||+++|+|.+++.. ..+++.+++.++.|++.||+||| +. +|+||
T Consensus 107 ~~-~~~~~~~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~ 171 (342)
T 1b6c_B 107 KD-NGTWTQLWLVSDYHEHGSLFDYLNR-----------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHR 171 (342)
T ss_dssp CC-CSSCCCEEEEECCCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECS
T ss_pred cc-CCccceeEEEEeecCCCcHHHHHhc-----------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeC
Confidence 32 1112378999999999999999952 25899999999999999999999 77 99999
Q ss_pred cCCCCCeEecCCCcEEEcccccceecCCCCCcc--ccccccccccccccccccCC------CcCcccchhhHHHHHHHHH
Q 046598 828 DLKPSNILLDEDMIAHIGDFGLARFLPLSSAQT--SSIGAKGSIGYIAPEYGLGS------EVSISGDVYSYGILLLELI 899 (986)
Q Consensus 828 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwSlGvvl~ell 899 (986)
||||+||+++.++.+||+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||+
T Consensus 172 Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~ 251 (342)
T 1b6c_B 172 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251 (342)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHH
Confidence 999999999999999999999998764333211 22345689999999998775 3457899999999999999
Q ss_pred hC----------CCCCCccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHH
Q 046598 900 TR----------KKPTDIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIG 969 (986)
Q Consensus 900 tg----------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 969 (986)
|| +.||............+...... ..+...... +. ...+++..+.+++
T Consensus 252 tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~------------~~-~~~~~~~~l~~li 310 (342)
T 1b6c_B 252 RRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE--------QKLRPNIPN------------RW-QSCEALRVMAKIM 310 (342)
T ss_dssp TTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT--------SCCCCCCCG------------GG-GTSHHHHHHHHHH
T ss_pred hccCcCCcccccccCccccCcCcccHHHHHHHHHH--------HHhCCCCcc------------cc-cchhHHHHHHHHH
Confidence 99 66775443333222222221111 111111000 00 1125667789999
Q ss_pred hcccCCCCCCCCCCCCC
Q 046598 970 VACSMESPEDRMSMTNV 986 (986)
Q Consensus 970 ~~Cl~~dP~~RPt~~eV 986 (986)
.+||+.||++|||++||
T Consensus 311 ~~cl~~dp~~Rps~~~i 327 (342)
T 1b6c_B 311 RECWYANGAARLTALRI 327 (342)
T ss_dssp HHHCCSSGGGSCCHHHH
T ss_pred HHHhccChhhCCCHHHH
Confidence 99999999999998764
No 226
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.5e-37 Score=364.19 Aligned_cols=249 Identities=22% Similarity=0.287 Sum_probs=193.6
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC--chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.++|++.+.||+|+||+||+|++..++..||+|+++... ......+.+|+++++.++||||++++++| .....
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~ 110 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFF-----EDKRN 110 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCCE
Confidence 457999999999999999999999999999999997532 23357789999999999999999999994 55688
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCC---Cc
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDED---MI 841 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~ 841 (986)
.|+||||+++|+|.+++.. ...+++.++..|+.||+.||+|||+. +|+||||||+||+++.. +.
T Consensus 111 ~~lv~e~~~~g~L~~~~~~----------~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 177 (494)
T 3lij_A 111 YYLVMECYKGGELFDEIIH----------RMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDAL 177 (494)
T ss_dssp EEEEEECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCC
T ss_pred EEEEEecCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCc
Confidence 9999999999999998842 24589999999999999999999999 99999999999999764 45
Q ss_pred EEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHh
Q 046598 842 AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLART 921 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 921 (986)
+||+|||+++...... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||...... .....
T Consensus 178 ~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~~ 248 (494)
T 3lij_A 178 IKIVDFGLSAVFENQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-----EILRK 248 (494)
T ss_dssp EEECCCTTCEECBTTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH
T ss_pred EEEEECCCCeECCCCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHH
Confidence 9999999998764322 233456999999999976 56999999999999999999999999642211 11110
Q ss_pred hCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 922 ALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 922 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+.......... .....+.++.+++.+||+.||++|||++|+
T Consensus 249 --------i~~~~~~~~~~----------------~~~~~s~~~~~li~~~L~~dp~~R~s~~e~ 289 (494)
T 3lij_A 249 --------VEKGKYTFDSP----------------EWKNVSEGAKDLIKQMLQFDSQRRISAQQA 289 (494)
T ss_dssp --------HHHTCCCCCSG----------------GGTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred --------HHhCCCCCCch----------------hcccCCHHHHHHHHHHCCCChhhCccHHHH
Confidence 00000000000 001223457799999999999999998763
No 227
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=7.9e-38 Score=366.16 Aligned_cols=250 Identities=25% Similarity=0.305 Sum_probs=199.8
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
..++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||++++++ +...
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~-----~~~~ 98 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF-----FEDK 98 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEE-----EECS
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEE-----EEeC
Confidence 3467999999999999999999999889999999986432 3446789999999999999999999999 4556
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEe---cCC
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILL---DED 839 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~ 839 (986)
...++||||+.+|+|.+++.. ...+++.++..|+.||+.||+|||++ +|+||||||+||++ +.+
T Consensus 99 ~~~~lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 165 (484)
T 3nyv_A 99 GYFYLVGEVYTGGELFDEIIS----------RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKD 165 (484)
T ss_dssp SEEEEEECCCCSCBHHHHHHT----------CSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTT
T ss_pred CEEEEEEecCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCC
Confidence 889999999999999999852 34689999999999999999999999 99999999999999 567
Q ss_pred CcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHH
Q 046598 840 MIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLA 919 (986)
Q Consensus 840 ~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~ 919 (986)
+.+||+|||+++.+..... .....||+.|+|||++.+ .++.++||||+||++|+|++|++||...... ......
T Consensus 166 ~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i 239 (484)
T 3nyv_A 166 ANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY--DILKKV 239 (484)
T ss_dssp CCEEECCTTHHHHBCCCCS---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH
T ss_pred CcEEEEeeeeeEEcccccc---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--HHHHHH
Confidence 8999999999987643322 234569999999999876 6999999999999999999999999642211 000110
Q ss_pred HhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 920 RTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 920 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. ........ +.....+.++.+++.+||+.||++|||++|+
T Consensus 240 ~-----------~~~~~~~~----------------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~ 279 (484)
T 3nyv_A 240 E-----------KGKYTFEL----------------PQWKKVSESAKDLIRKMLTYVPSMRISARDA 279 (484)
T ss_dssp H-----------HCCCCCCS----------------GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred H-----------cCCCCCCC----------------cccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 0 00000000 0001234557799999999999999998763
No 228
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=339.29 Aligned_cols=253 Identities=21% Similarity=0.293 Sum_probs=196.9
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC----chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH----HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 761 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 761 (986)
..++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++. ..+
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~---~~~ 79 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLY---NEE 79 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE---CC-
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEE---cCC
Confidence 3578999999999999999999999889999999997432 234578999999999999999999999853 234
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI 841 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 841 (986)
....++||||++++ +.+++... ....+++.++..++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 80 ~~~~~lv~e~~~~~-l~~~~~~~--------~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~ 147 (305)
T 2wtk_C 80 KQKMYMVMEYCVCG-MQEMLDSV--------PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGT 147 (305)
T ss_dssp --CEEEEEECCSEE-HHHHHHHS--------TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred CCeEEEEehhccCC-HHHHHHhC--------cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCc
Confidence 56789999999776 77777532 234689999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceecCCCCCccccccccccccccccccccCCC--cCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHH
Q 046598 842 AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSE--VSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLA 919 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~ 919 (986)
+||+|||.+................|++.|+|||++.+.. ++.++||||||+++|||++|+.||.... .....
T Consensus 148 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~ 222 (305)
T 2wtk_C 148 LKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-----IYKLF 222 (305)
T ss_dssp EEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHH
T ss_pred EEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-----HHHHH
Confidence 9999999998765433333344566899999999987654 4789999999999999999999996321 11111
Q ss_pred HhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 920 RTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 920 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. .+.......+ ..++..+.+++.+||+.||++|||++|+
T Consensus 223 ~---------~i~~~~~~~~-------------------~~~~~~l~~li~~~l~~dp~~Rps~~~l 261 (305)
T 2wtk_C 223 E---------NIGKGSYAIP-------------------GDCGPPLSDLLKGMLEYEPAKRFSIRQI 261 (305)
T ss_dssp H---------HHHHCCCCCC-------------------SSSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred H---------HHhcCCCCCC-------------------CccCHHHHHHHHHHccCChhhCCCHHHH
Confidence 1 0000000000 0223457789999999999999998764
No 229
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.1e-38 Score=365.15 Aligned_cols=249 Identities=29% Similarity=0.469 Sum_probs=193.0
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
..++|++.+.||+|+||.||+|.+.. +..||||+++... ...+++.+|++++++++||||+++++++. + +..
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~-~~~ 253 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-----E-EPI 253 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-----S-SSC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEc-----C-Cce
Confidence 34678899999999999999999986 5679999997543 33578999999999999999999999853 2 568
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEc
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIG 845 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 845 (986)
++||||+++|+|.++++.. ....+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 254 ~iv~e~~~~gsL~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~ 322 (452)
T 1fmk_A 254 YIVTEYMSKGSLLDFLKGE--------TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVA 322 (452)
T ss_dssp EEEECCCTTCBHHHHHSHH--------HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEEehhhcCCCHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEEC
Confidence 9999999999999999521 224589999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCC
Q 046598 846 DFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLARTALP 924 (986)
Q Consensus 846 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 924 (986)
|||+++...... ........++..|+|||++.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 323 DfG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~---- 392 (452)
T 1fmk_A 323 DFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLD---- 392 (452)
T ss_dssp CCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHH----
T ss_pred CCccceecCCCc-eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHH----
Confidence 999998764322 122233457889999999998999999999999999999999 99998632211 1111
Q ss_pred CchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 925 DHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 925 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+..... .+.+..++..+.+++.+||+.||++|||+++|
T Consensus 393 -----~i~~~~~------------------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l 431 (452)
T 1fmk_A 393 -----QVERGYR------------------MPCPPECPESLHDLMCQCWRKEPEERPTFEYL 431 (452)
T ss_dssp -----HHHTTCC------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -----HHHcCCC------------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 0100000 00011345568899999999999999998764
No 230
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=5.5e-38 Score=340.16 Aligned_cols=250 Identities=21% Similarity=0.344 Sum_probs=194.1
Q ss_pred hhcCCCCCcccccccceeEEEEEECC---CCeEEEEEEeecc-CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDD---GRTTIAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 761 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 761 (986)
..++|.+.+.||+|+||.||+|.+.. .+..||+|+++.. .....+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------ 83 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE------ 83 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC------
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc------
Confidence 35789999999999999999999753 3456999998754 3345678999999999999999999999852
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI 841 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 841 (986)
++..++||||+++++|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 84 ~~~~~~v~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 151 (281)
T 3cc6_A 84 EEPTWIIMELYPYGELGHYLER---------NKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPEC 151 (281)
T ss_dssp SSSCEEEEECCTTCBHHHHHHH---------HTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTE
T ss_pred CCCCEEEEecCCCCCHHHHHHh---------ccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCc
Confidence 2346899999999999999962 234589999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHH
Q 046598 842 AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~ 920 (986)
+||+|||.++....... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .......
T Consensus 152 ~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~~~ 228 (281)
T 3cc6_A 152 VKLGDFGLSRYIEDEDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGVLE 228 (281)
T ss_dssp EEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHHHH
T ss_pred EEeCccCCCcccccccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHHHh
Confidence 99999999986543221 12233457889999999988899999999999999999998 99998632221 1111111
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.... ...+ ..++..+.+++.+||+.||++|||++||
T Consensus 229 ~~~~-----------~~~~-------------------~~~~~~l~~li~~~l~~~p~~Rps~~el 264 (281)
T 3cc6_A 229 KGDR-----------LPKP-------------------DLCPPVLYTLMTRCWDYDPSDRPRFTEL 264 (281)
T ss_dssp HTCC-----------CCCC-------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cCCC-----------CCCC-------------------CCCCHHHHHHHHHHccCCchhCcCHHHH
Confidence 0000 0000 0123457899999999999999998764
No 231
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=4.1e-38 Score=343.05 Aligned_cols=250 Identities=23% Similarity=0.352 Sum_probs=195.3
Q ss_pred hhcCCCCCc-ccccccceeEEEEEE--CCCCeEEEEEEeeccC--chhHHHHHHHHHHHhcCCCCcceeeeeeccccccC
Q 046598 686 ATDRFSSVN-QIGEGSFGSVFKGIL--DDGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ 760 (986)
Q Consensus 686 ~~~~y~~~~-~lg~G~~g~Vy~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 760 (986)
..++|.+.+ .||+|+||.||+|.+ ..+++.||||+++... ....+++.+|++++++++||||+++++++
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~------ 87 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC------ 87 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE------
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE------
Confidence 456788888 999999999999955 5557899999997532 23357899999999999999999999985
Q ss_pred CCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCC
Q 046598 761 GNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDM 840 (986)
Q Consensus 761 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 840 (986)
..+..++||||+++++|.+++.. ...+++.+++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 88 ~~~~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~ 154 (291)
T 1xbb_A 88 EAESWMLVMEMAELGPLNKYLQQ----------NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQH 154 (291)
T ss_dssp ESSSEEEEEECCTTEEHHHHHHH----------CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred CCCCcEEEEEeCCCCCHHHHHHh----------CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCC
Confidence 23568999999999999999952 23589999999999999999999999 999999999999999999
Q ss_pred cEEEcccccceecCCCCCc-cccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHH
Q 046598 841 IAHIGDFGLARFLPLSSAQ-TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNL 918 (986)
Q Consensus 841 ~~kL~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~ 918 (986)
.+||+|||+++........ .......+++.|+|||++.+..++.++||||||+++|+|++ |+.||...... .....
T Consensus 155 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~ 232 (291)
T 1xbb_A 155 YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAM 232 (291)
T ss_dssp EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHH
T ss_pred cEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHH
Confidence 9999999999876543322 22233446789999999988899999999999999999999 99998642211 11111
Q ss_pred HHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 919 ARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 919 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. ....... .+..++.++.+++.+||+.||++|||++||
T Consensus 233 ~------------~~~~~~~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 270 (291)
T 1xbb_A 233 L------------EKGERMG------------------CPAGCPREMYDLMNLCWTYDVENRPGFAAV 270 (291)
T ss_dssp H------------HTTCCCC------------------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred H------------HcCCCCC------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 1 1000000 001234567899999999999999998764
No 232
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.3e-37 Score=336.46 Aligned_cols=246 Identities=23% Similarity=0.310 Sum_probs=190.7
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
.++|.+.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+++++.++||||+++++++ ...+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 84 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI-----STPT 84 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEE-----ecCC
Confidence 468999999999999999999999889999999996432 23356789999999999999999999994 4567
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..++||||+++++|.+++.. ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~ 151 (276)
T 2h6d_A 85 DFFMVMEYVSGGELFDYICK----------HGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAK 151 (276)
T ss_dssp EEEEEEECCCSCBHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEE
T ss_pred eEEEEEeccCCCcHHHHHhc----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEE
Confidence 89999999999999999952 23589999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEV-SISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 922 (986)
|+|||.+....... ......+++.|+|||.+.+..+ +.++||||||+++|+|++|+.||..... .....
T Consensus 152 l~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~-- 221 (276)
T 2h6d_A 152 IADFGLSNMMSDGE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-----PTLFK-- 221 (276)
T ss_dssp ECCCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH--
T ss_pred EeecccccccCCCc---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-----HHHHH--
Confidence 99999998654322 2233568999999999988765 6899999999999999999999863211 11110
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+.......+ ...+.++.+++.+|++.||++|||++||
T Consensus 222 -------~~~~~~~~~~-------------------~~~~~~l~~li~~~l~~~p~~Rps~~~~ 259 (276)
T 2h6d_A 222 -------KIRGGVFYIP-------------------EYLNRSVATLLMHMLQVDPLKRATIKDI 259 (276)
T ss_dssp -------HHHHCCCCCC-------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -------HhhcCcccCc-------------------hhcCHHHHHHHHHHccCChhhCCCHHHH
Confidence 0000000000 0123457789999999999999998764
No 233
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.3e-37 Score=352.75 Aligned_cols=282 Identities=21% Similarity=0.205 Sum_probs=197.0
Q ss_pred HHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeecccccc----
Q 046598 684 YNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY---- 759 (986)
Q Consensus 684 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 759 (986)
....++|++.+.||+|+||+||+|.+..+++.||||++.... ....+|+++++.++||||+++++++.....
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 345678999999999999999999999999999999986432 223479999999999999999998743211
Q ss_pred -----------------------------CCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHH
Q 046598 760 -----------------------------QGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVA 810 (986)
Q Consensus 760 -----------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~ 810 (986)
......++||||++ |+|.+.+.... .....+++..++.++.||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~------~~~~~l~~~~~~~i~~qi~ 151 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFI------RSGRSIPMNLISIYIYQLF 151 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHH------HTTCCCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHH------hcCCCCCHHHHHHHHHHHH
Confidence 34456899999997 58877775321 2245689999999999999
Q ss_pred HHHHHHHhcCCCCeEeecCCCCCeEec-CCCcEEEcccccceecCCCCCccccccccccccccccccccCC-CcCcccch
Q 046598 811 CALNYLHHDCQPPIAHCDLKPSNILLD-EDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGS-EVSISGDV 888 (986)
Q Consensus 811 ~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv 888 (986)
+||+|||+. ||+||||||+||+++ .++.+||+|||+|+....... .....+|+.|+|||++.+. .++.++||
T Consensus 152 ~aL~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di 225 (383)
T 3eb0_A 152 RAVGFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDL 225 (383)
T ss_dssp HHHHHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHH
T ss_pred HHHHHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhh
Confidence 999999999 999999999999998 688999999999987643322 2335689999999998775 48999999
Q ss_pred hhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHH
Q 046598 889 YSYGILLLELITRKKPTDIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRI 968 (986)
Q Consensus 889 wSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 968 (986)
||+||++|||++|+.||......+ .+.......-......+. ..- ....+.. .........+...+...+.++.++
T Consensus 226 wslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~-~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l 301 (383)
T 3eb0_A 226 WSIGCVFGELILGKPLFSGETSID-QLVRIIQIMGTPTKEQMI-RMN-PHYTEVR-FPTLKAKDWRKILPEGTPSLAIDL 301 (383)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHH-HHC-TTC--CC-CCCCCCCCHHHHSCTTCCHHHHHH
T ss_pred hhHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHH-HhC-ccccccc-CCccCcccHHhhCCCCCCHHHHHH
Confidence 999999999999999997432211 111221111111111110 000 0000000 000000000111111244567899
Q ss_pred HhcccCCCCCCCCCCCCC
Q 046598 969 GVACSMESPEDRMSMTNV 986 (986)
Q Consensus 969 ~~~Cl~~dP~~RPt~~eV 986 (986)
+.+||+.||++|||+.|+
T Consensus 302 i~~~L~~dP~~R~t~~e~ 319 (383)
T 3eb0_A 302 LEQILRYEPDLRINPYEA 319 (383)
T ss_dssp HHHHCCSSGGGSCCHHHH
T ss_pred HHHHccCChhhCCCHHHH
Confidence 999999999999998763
No 234
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=8.6e-38 Score=350.75 Aligned_cols=207 Identities=25% Similarity=0.320 Sum_probs=175.3
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
..++|++.+.||+|+||.||+|.+..+++.||||+++... .....++.+|++++++++||||+++++++....+.....
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 3578999999999999999999999889999999996433 234567889999999999999999999976544556678
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHI 844 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 844 (986)
.++||||++ ++|.+++.. ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||
T Consensus 89 ~~lv~e~~~-~~L~~~~~~-----------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl 153 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVIST-----------QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKV 153 (353)
T ss_dssp EEEEECCCS-EEHHHHHHH-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEE
T ss_pred EEEEEeccC-ccHHHHHhh-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEE
Confidence 999999996 699998852 3589999999999999999999999 9999999999999999999999
Q ss_pred cccccceecCCCCCcc--------ccccccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCc
Q 046598 845 GDFGLARFLPLSSAQT--------SSIGAKGSIGYIAPEYGLG-SEVSISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
+|||+++......... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 154 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 225 (353)
T 2b9h_A 154 CDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225 (353)
T ss_dssp CCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred EecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999998764322111 1223468999999998754 7799999999999999999999999974
No 235
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-38 Score=348.35 Aligned_cols=267 Identities=22% Similarity=0.290 Sum_probs=197.8
Q ss_pred CCCcChHHHHHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcC-CCCcceeeeee
Q 046598 675 FPNISYQNLYNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTA 753 (986)
Q Consensus 675 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 753 (986)
.+.+.+.++....++|++.+.||+|+||.||+|++..+++.||||++.... ...+.+.+|+.+++++ +||||++++++
T Consensus 11 ~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 89 (326)
T 2x7f_A 11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGA 89 (326)
T ss_dssp -----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEE
T ss_pred chhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeE
Confidence 344555566667889999999999999999999998889999999997543 3447889999999998 89999999999
Q ss_pred cccccc-CCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCC
Q 046598 754 CSGVDY-QGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPS 832 (986)
Q Consensus 754 ~~~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~ 832 (986)
+..... ......++||||+++++|.+++... ....+++..++.++.||+.||+|||+. +|+||||||+
T Consensus 90 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~ 158 (326)
T 2x7f_A 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT--------KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQ 158 (326)
T ss_dssp EEECC--CCCCEEEEEEECCTTEEHHHHHHHS--------GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGG
T ss_pred EeeccCccccceEEEEEEcCCCCcHHHHHHhc--------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHH
Confidence 643211 1256789999999999999999632 124689999999999999999999999 9999999999
Q ss_pred CeEecCCCcEEEcccccceecCCCCCcccccccccccccccccccc-----CCCcCcccchhhHHHHHHHHHhCCCCCCc
Q 046598 833 NILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGL-----GSEVSISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 833 NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
||+++.++.+||+|||++....... .......|++.|+|||++. +..++.++|||||||++|+|++|+.||..
T Consensus 159 NIl~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 236 (326)
T 2x7f_A 159 NVLLTENAEVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 236 (326)
T ss_dssp GEEECTTCCEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred HEEEcCCCCEEEeeCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999997653221 1223456899999999987 56789999999999999999999999863
Q ss_pred cccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 908 MFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..... ..........+ ... . ...+..+.+++.+||+.||++|||++||
T Consensus 237 ~~~~~-~~~~~~~~~~~---------~~~--~-------------------~~~~~~l~~li~~~l~~dp~~Rps~~~l 284 (326)
T 2x7f_A 237 MHPMR-ALFLIPRNPAP---------RLK--S-------------------KKWSKKFQSFIESCLVKNHSQRPATEQL 284 (326)
T ss_dssp SCHHH-HHHHHHHSCCC---------CCS--C-------------------SCSCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred CcHHH-HHHHhhcCccc---------cCC--c-------------------cccCHHHHHHHHHHhccChhhCCCHHHH
Confidence 22110 00000000000 000 0 0123457799999999999999998763
No 236
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=342.39 Aligned_cols=282 Identities=21% Similarity=0.253 Sum_probs=197.1
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeecccc---------
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGV--------- 757 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------- 757 (986)
.++|++.+.||+|+||.||+|.+..+++.||||++........+++.+|++++++++||||+++++++...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 46899999999999999999999998999999999876666778899999999999999999999986322
Q ss_pred ccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEec
Q 046598 758 DYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLD 837 (986)
Q Consensus 758 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 837 (986)
........++||||++ |+|.+++.. +.+++.+++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~-----------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 154 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ-----------GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFIN 154 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhc-----------CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEc
Confidence 1244578899999997 699999851 3588999999999999999999999 999999999999997
Q ss_pred -CCCcEEEcccccceecCCCCC-ccccccccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCcccccccc
Q 046598 838 -EDMIAHIGDFGLARFLPLSSA-QTSSIGAKGSIGYIAPEYGLG-SEVSISGDVYSYGILLLELITRKKPTDIMFEGDMN 914 (986)
Q Consensus 838 -~~~~~kL~DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~ 914 (986)
+++.+||+|||.++....... ........++..|+|||.+.+ ..++.++|||||||++|||++|+.||......+ .
T Consensus 155 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~ 233 (320)
T 2i6l_A 155 TEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-Q 233 (320)
T ss_dssp TTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-H
T ss_pred CCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-H
Confidence 567999999999986543211 122233457899999998765 678999999999999999999999997432211 1
Q ss_pred HHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 915 LHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 915 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
... .....+....+........-+.. ...................+.++.+++.+||+.||++|||++|+
T Consensus 234 ~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 303 (320)
T 2i6l_A 234 MQL-ILESIPVVHEEDRQELLSVIPVY-IRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEA 303 (320)
T ss_dssp HHH-HHHHSCCCCHHHHHHHHTTSCHH-HHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred HHH-HHHhcCCCchhhhhhhhhcCccc-ccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHH
Confidence 111 11111111100000000000000 00000000000000111345678899999999999999998764
No 237
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=8.4e-38 Score=340.51 Aligned_cols=253 Identities=19% Similarity=0.243 Sum_probs=183.1
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc--hhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH--GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.++|++.+.||+|+||+||+|++..+++.||||+++.... ...+.+.++...++.++||||+++++++ ..++.
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~-----~~~~~ 80 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGAL-----FREGD 80 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSS
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeee-----eccCC
Confidence 5789999999999999999999998899999999975322 2223344555568888999999999994 45678
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHI 844 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 844 (986)
.++||||++ |+|.+++.... .....+++.+++.|+.|++.||+|||++ .||+||||||+||+++.++.+||
T Consensus 81 ~~lv~e~~~-~~l~~~l~~~~------~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl 151 (290)
T 3fme_A 81 VWICMELMD-TSLDKFYKQVI------DKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKM 151 (290)
T ss_dssp EEEEEECCS-EEHHHHHHHHH------HTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEB
T ss_pred EEEEEehhc-cchHHHHHHHH------hcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEE
Confidence 999999996 58888875221 2345699999999999999999999984 28999999999999999999999
Q ss_pred cccccceecCCCCCccccccccccccccccccc----cCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHH
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYG----LGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~ 920 (986)
+|||+++...... ......||+.|+|||++ .+..++.++||||+||++|+|++|+.||...............
T Consensus 152 ~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 228 (290)
T 3fme_A 152 CDFGISGYLVDDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 228 (290)
T ss_dssp CCC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH
T ss_pred eecCCcccccccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhc
Confidence 9999998654322 22234689999999995 5667899999999999999999999999632211111111111
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
......+. ...+.++.+++.+||+.||++|||++||
T Consensus 229 ------------~~~~~~~~------------------~~~~~~~~~li~~~l~~~p~~Rpt~~e~ 264 (290)
T 3fme_A 229 ------------EPSPQLPA------------------DKFSAEFVDFTSQCLKKNSKERPTYPEL 264 (290)
T ss_dssp ------------SCCCCCCT------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ------------cCCCCccc------------------ccCCHHHHHHHHHHhhcChhhCcCHHHH
Confidence 10000000 0223457899999999999999998764
No 238
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2e-37 Score=358.17 Aligned_cols=254 Identities=20% Similarity=0.285 Sum_probs=197.1
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
.++|++.++||+|+||.||+|++..+++.||||+++.... .+++.+|+++++.++|++.+..+.++ ....+..+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~----~~~~~~~~ 79 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWF----GVEGDYNV 79 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEE----EEETTEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEE----EeeCCEEE
Confidence 4789999999999999999999998899999999875432 24578999999999875544444443 34557889
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEe---cCCCcEE
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILL---DEDMIAH 843 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~k 843 (986)
+||||+ +++|.+++... ...+++.+++.|+.||+.||+|||++ +|+||||||+|||+ +.++.+|
T Consensus 80 lvme~~-g~sL~~ll~~~---------~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vk 146 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFC---------SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVY 146 (483)
T ss_dssp EEEECC-CCBHHHHHHHT---------TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEE
T ss_pred EEEECC-CCCHHHHHHhh---------cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEE
Confidence 999999 99999999632 34689999999999999999999999 99999999999999 6889999
Q ss_pred EcccccceecCCCCCc-----cccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccc--cHH
Q 046598 844 IGDFGLARFLPLSSAQ-----TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDM--NLH 916 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~--~~~ 916 (986)
|+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .+.
T Consensus 147 L~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~ 226 (483)
T 3sv0_A 147 IIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYE 226 (483)
T ss_dssp ECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHH
T ss_pred EEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHH
Confidence 9999999876543321 122356799999999999999999999999999999999999999975332211 011
Q ss_pred HHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 917 NLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 917 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
............ .....++.++.+++.+||+.+|++||++++|
T Consensus 227 ~i~~~~~~~~~~---------------------------~l~~~~p~~l~~li~~cl~~dP~~RPs~~el 269 (483)
T 3sv0_A 227 KISEKKVATSIE---------------------------ALCRGYPTEFASYFHYCRSLRFDDKPDYSYL 269 (483)
T ss_dssp HHHHHHHHSCHH---------------------------HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred HHhhccccccHH---------------------------HHhcCCcHHHHHHHHHHhcCChhhCcCHHHH
Confidence 111110000000 0111335678899999999999999998754
No 239
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.4e-37 Score=337.11 Aligned_cols=252 Identities=21% Similarity=0.283 Sum_probs=199.2
Q ss_pred HhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---------chhHHHHHHHHHHHhcCC-CCcceeeeeec
Q 046598 685 NATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---------HGAFKSFIAECNTLKNIR-HRNLVKILTAC 754 (986)
Q Consensus 685 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~ 754 (986)
...++|++.+.||+|+||.||+|.+..+++.||||+++... ....+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34678999999999999999999999999999999997543 122456889999999995 99999999994
Q ss_pred cccccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCe
Q 046598 755 SGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNI 834 (986)
Q Consensus 755 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NI 834 (986)
..+...++||||+++++|.+++.. ...+++.++..++.||+.||+|||+. +|+||||||+||
T Consensus 94 -----~~~~~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Ni 155 (298)
T 1phk_A 94 -----ETNTFFFLVFDLMKKGELFDYLTE----------KVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENI 155 (298)
T ss_dssp -----ECSSEEEEEEECCTTCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred -----ccCCeEEEEEeccCCCcHHHHHhc----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceE
Confidence 556889999999999999999952 24689999999999999999999999 999999999999
Q ss_pred EecCCCcEEEcccccceecCCCCCcccccccccccccccccccc------CCCcCcccchhhHHHHHHHHHhCCCCCCcc
Q 046598 835 LLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGL------GSEVSISGDVYSYGILLLELITRKKPTDIM 908 (986)
Q Consensus 835 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwSlGvvl~elltg~~pf~~~ 908 (986)
+++.++.+||+|||.+........ .....+++.|+|||++. ...++.++||||||+++|+|++|+.||...
T Consensus 156 l~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 232 (298)
T 1phk_A 156 LLDDDMNIKLTDFGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR 232 (298)
T ss_dssp EECTTCCEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEcCCCcEEEecccchhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc
Confidence 999999999999999987643322 23356899999999875 457889999999999999999999998632
Q ss_pred ccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 909 FEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.. ..... .+......... +.....+.++.+++.+||+.||++|||++|+
T Consensus 233 ~~-----~~~~~--------~~~~~~~~~~~----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 281 (298)
T 1phk_A 233 KQ-----MLMLR--------MIMSGNYQFGS----------------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA 281 (298)
T ss_dssp SH-----HHHHH--------HHHHTCCCCCT----------------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred cH-----HHHHH--------HHhcCCcccCc----------------ccccccCHHHHHHHHHHccCCcccCCCHHHH
Confidence 11 11100 00000000000 0001234567899999999999999998763
No 240
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=4.6e-38 Score=344.90 Aligned_cols=267 Identities=23% Similarity=0.309 Sum_probs=181.8
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
..++|++.+.||+|+||.||+|.+..+++.||||++.... ....+++.+|++++++++||||+++++++ ..++.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 87 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF-----VVKDE 87 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEE-----ESSSC
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEE-----eecCC
Confidence 4578999999999999999999998888999999986432 23456788999999999999999999984 44567
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHI 844 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 844 (986)
.++||||+++++|.+++...... .......+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl 162 (303)
T 2vwi_A 88 LWLVMKLLSGGSVLDIIKHIVAK--GEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQI 162 (303)
T ss_dssp EEEEEECCTTCBHHHHHHHHHHT--TTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEE
T ss_pred cEEEehhccCCchHHHHHHHhhc--cccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEE
Confidence 99999999999999998632111 011235689999999999999999999999 9999999999999999999999
Q ss_pred cccccceecCCCCC---ccccccccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHH
Q 046598 845 GDFGLARFLPLSSA---QTSSIGAKGSIGYIAPEYGLG-SEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 845 ~DFG~a~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~ 920 (986)
+|||.+........ ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .....
T Consensus 163 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~ 240 (303)
T 2vwi_A 163 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV--LMLTL 240 (303)
T ss_dssp CCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH--HHHHH
T ss_pred EeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH--HHHHh
Confidence 99999976543221 112234568999999999876 5689999999999999999999999974322111 00000
Q ss_pred hhCCCchh-HHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVM-DIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~-~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
...+.... ...+... ....+.++.+++.+||+.||++|||++||
T Consensus 241 ~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~l 285 (303)
T 2vwi_A 241 QNDPPSLETGVQDKEM----------------------LKKYGKSFRKMISLCLQKDPEKRPTAAEL 285 (303)
T ss_dssp TSSCCCTTC-----CC----------------------CCCCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred ccCCCccccccccchh----------------------hhhhhHHHHHHHHHHccCChhhCcCHHHH
Confidence 00000000 0000000 00123457789999999999999998764
No 241
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.3e-37 Score=347.30 Aligned_cols=254 Identities=20% Similarity=0.272 Sum_probs=194.2
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC-chhHHHHHHHHHH-HhcCCCCcceeeeeeccccccCCCc
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH-HGAFKSFIAECNT-LKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
..++|++.+.||+|+||.||+|.+..+++.||||+++... .....++..|..+ ++.++||||+++++++ ..++
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~-----~~~~ 123 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGAL-----FREG 123 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEE-----ECSS
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEE-----EeCC
Confidence 3567999999999999999999998889999999997532 2334556666665 7788999999999994 4457
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..++||||+++ +|.+++.... .....+++..++.|+.||+.||+|||++ .+|+||||||+||+++.++.+|
T Consensus 124 ~~~lv~e~~~~-~L~~~l~~~~------~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~k 194 (340)
T 3an0_A 124 DVWICMELMDT-SLDKFYKQVI------DKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVK 194 (340)
T ss_dssp CEEEEECCCSE-EHHHHHHHHH------HTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEE
T ss_pred cEEEEHHHhhC-cHHHHHHHHH------hcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEE
Confidence 89999999975 9999885321 1245789999999999999999999973 1899999999999999999999
Q ss_pred EcccccceecCCCCCcccccccccccccccccccc----CCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHH
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGL----GSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLA 919 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~ 919 (986)
|+|||+++.... ........||+.|+|||++. +..++.++|||||||++|||++|+.||............
T Consensus 195 l~Dfg~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~-- 269 (340)
T 3an0_A 195 MCDFGISGYLVD---SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ-- 269 (340)
T ss_dssp ECCCSHHHHHSC---HHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH--
T ss_pred EeeCCCceeccc---ccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHH--
Confidence 999999986532 12223356999999999964 347899999999999999999999999642211111111
Q ss_pred HhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 920 RTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 920 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+.......+. ..++.++.+++.+||+.||++|||++||
T Consensus 270 ----------~~~~~~~~~~~------------------~~~~~~~~~li~~~l~~dp~~Rps~~el 308 (340)
T 3an0_A 270 ----------VVEEPSPQLPA------------------DKFSAEFVDFTSQCLKKNSKERPTYPEL 308 (340)
T ss_dssp ----------HHHSCCCCCCG------------------GGSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ----------HhcCCCCCCCc------------------ccCCHHHHHHHHHHccCCcccCcCHHHH
Confidence 11100000000 0234567899999999999999998764
No 242
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.2e-37 Score=351.14 Aligned_cols=201 Identities=25% Similarity=0.321 Sum_probs=168.5
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcCCCCcceeeeeecccccc-CCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY-QGN 762 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~ 762 (986)
..++|.+.+.||+|+||.||+|.+..+++.||||++... .....+++.+|+.+++.++||||+++++++..... ...
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 357899999999999999999999999999999999753 23335778899999999999999999999643211 112
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
...++||||+. ++|.+++. ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~------------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~ 183 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMG------------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCEL 183 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTT------------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCE
T ss_pred eeEEEEEcccc-ccHHHHhh------------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCE
Confidence 23499999996 68988873 2489999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecCCCCCccccccccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCc
Q 046598 843 HIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG-SEVSISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 843 kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
||+|||+++.... ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..
T Consensus 184 kL~Dfg~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 244 (371)
T 4exu_A 184 KILDFGLARHADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 244 (371)
T ss_dssp EECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred EEEecCccccccc-----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999986432 2234568999999999887 6899999999999999999999999974
No 243
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.6e-37 Score=353.43 Aligned_cols=200 Identities=26% Similarity=0.334 Sum_probs=171.6
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcC------CCCcceeeeeecccccc
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNI------RHRNLVKILTACSGVDY 759 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~ 759 (986)
...+|++.+.||+|+||+||+|.+..+++.||||+++.. ....+.+.+|+++++.+ +|+||+++++++
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~----- 168 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENF----- 168 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEE-----
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeec-----
Confidence 356899999999999999999999999999999999753 23346677888888776 577999999984
Q ss_pred CCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCC
Q 046598 760 QGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDED 839 (986)
Q Consensus 760 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 839 (986)
......++||||+. ++|.+++.... ...+++..++.|+.||+.||+|||+. +|+||||||+|||++.+
T Consensus 169 ~~~~~~~lv~e~~~-~~L~~~l~~~~--------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~ 236 (429)
T 3kvw_A 169 TFRNHICMTFELLS-MNLYELIKKNK--------FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQ 236 (429)
T ss_dssp EETTEEEEEECCCC-CBHHHHHHHTT--------TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESST
T ss_pred ccCCeEEEEEeccC-CCHHHHHHhcc--------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccC
Confidence 44578999999995 69999986322 23589999999999999999999999 99999999999999999
Q ss_pred Cc--EEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCcc
Q 046598 840 MI--AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIM 908 (986)
Q Consensus 840 ~~--~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~ 908 (986)
+. +||+|||+|+..... .....||+.|+|||++.+..++.++|||||||++|||++|++||...
T Consensus 237 ~~~~vkL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 237 GRSGIKVIDFGSSCYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp TSCCEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCcceEEeecccceecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 87 999999999764322 22356899999999999999999999999999999999999999743
No 244
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=347.58 Aligned_cols=255 Identities=22% Similarity=0.246 Sum_probs=184.5
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCC-CCcceeeeeeccccc---cCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVD---YQG 761 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~---~~~ 761 (986)
...+|++.+.||+|+||.||+|++..+++.||||++........+.+.+|+.+++++. ||||+++++++.... ...
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 4568999999999999999999999889999999997766666778999999999995 999999999863211 244
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeecCCCCCeEecCC
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPP--IAHCDLKPSNILLDED 839 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~ 839 (986)
....++||||+. |+|.+++... .....+++.+++.|+.||+.||+|||+. + |+||||||+||+++.+
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~-------~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~ 174 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKM-------ESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQ 174 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHH-------HTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTT
T ss_pred CceEEEEEEecC-CCHHHHHHHh-------hccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCC
Confidence 567899999995 7999988532 1234689999999999999999999998 8 9999999999999999
Q ss_pred CcEEEcccccceecCCCCCcc----------ccccccccccccccccc---cCCCcCcccchhhHHHHHHHHHhCCCCCC
Q 046598 840 MIAHIGDFGLARFLPLSSAQT----------SSIGAKGSIGYIAPEYG---LGSEVSISGDVYSYGILLLELITRKKPTD 906 (986)
Q Consensus 840 ~~~kL~DFG~a~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwSlGvvl~elltg~~pf~ 906 (986)
+.+||+|||+++......... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||.
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 254 (337)
T 3ll6_A 175 GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254 (337)
T ss_dssp SCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-
T ss_pred CCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCc
Confidence 999999999998764332211 11234589999999998 56778999999999999999999999986
Q ss_pred ccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 907 IMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..... .. ........+.+ ..+..+.+++.+||+.||++|||++||
T Consensus 255 ~~~~~-----~~------------~~~~~~~~~~~------------------~~~~~~~~li~~~l~~~p~~Rps~~e~ 299 (337)
T 3ll6_A 255 DGAKL-----RI------------VNGKYSIPPHD------------------TQYTVFHSLIRAMLQVNPEERLSIAEV 299 (337)
T ss_dssp ----------------------------CCCCTTC------------------CSSGGGHHHHHHHSCSSGGGSCCHHHH
T ss_pred chhHH-----Hh------------hcCcccCCccc------------------ccchHHHHHHHHHccCChhhCcCHHHH
Confidence 32111 00 01000000000 111235689999999999999998764
No 245
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.8e-37 Score=335.72 Aligned_cols=248 Identities=27% Similarity=0.446 Sum_probs=196.7
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
.++|++.+.||+|+||.||+|.+.. +..||||+++... ...+.+.+|++++++++||||+++++++. ++..+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~ 83 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIY 83 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETT-TEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC------SSSCE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcC-CcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc------CCCcE
Confidence 4679999999999999999999875 6789999987543 34578999999999999999999999852 34589
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEcc
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIGD 846 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 846 (986)
+||||+++++|.+++... ....+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 84 ~v~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 152 (279)
T 1qpc_A 84 IITEYMENGSLVDFLKTP--------SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIAD 152 (279)
T ss_dssp EEEECCTTCBHHHHTTSH--------HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECC
T ss_pred EEEecCCCCCHHHHHhcC--------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECC
Confidence 999999999999999521 123589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCC
Q 046598 847 FGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLARTALPD 925 (986)
Q Consensus 847 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 925 (986)
||.++...... ........++..|+|||++.+..++.++||||||+++|||++ |+.||...... ....
T Consensus 153 fg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~----- 221 (279)
T 1qpc_A 153 FGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQ----- 221 (279)
T ss_dssp CTTCEECSSSC-EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHH-----
T ss_pred CcccccccCcc-cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH-----HHHH-----
Confidence 99998764332 222233456789999999988899999999999999999999 99998632211 1111
Q ss_pred chhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 926 HVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 926 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+........ ...++.++.+++.+|++.||++|||+++|
T Consensus 222 ----~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l 260 (279)
T 1qpc_A 222 ----NLERGYRMVR------------------PDNCPEELYQLMRLCWKERPEDRPTFDYL 260 (279)
T ss_dssp ----HHHTTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ----HHhcccCCCC------------------cccccHHHHHHHHHHhccChhhCCCHHHH
Confidence 0000000000 01234567899999999999999998763
No 246
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.4e-37 Score=337.65 Aligned_cols=246 Identities=24% Similarity=0.376 Sum_probs=197.4
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeecccccc------
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY------ 759 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 759 (986)
..++|++.+.||+|+||.||+|++..+++.||+|+++... +.+.+|++++++++||||+++++++....+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 4567999999999999999999999889999999997543 456789999999999999999998643211
Q ss_pred -----CCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCe
Q 046598 760 -----QGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNI 834 (986)
Q Consensus 760 -----~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NI 834 (986)
......++||||+++++|.+++... ....+++..++.++.||+.||.|||+. +|+||||||+||
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Ni 153 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--------RGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNI 153 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHG--------GGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhc--------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHE
Confidence 2245689999999999999999632 134689999999999999999999999 999999999999
Q ss_pred EecCCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCcccccccc
Q 046598 835 LLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMN 914 (986)
Q Consensus 835 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~ 914 (986)
+++.++.+||+|||+++....... .....|++.|+|||++.+..++.++||||||+++|||++|..||...
T Consensus 154 l~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------ 224 (284)
T 2a19_B 154 FLVDTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET------ 224 (284)
T ss_dssp EEEETTEEEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH------
T ss_pred EEcCCCCEEECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH------
Confidence 999999999999999987643322 23356899999999999999999999999999999999999886311
Q ss_pred HHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 915 LHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 915 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.... ..+.+..+.. ..+.++.+++.+||+.||++|||+.||
T Consensus 225 -~~~~--------~~~~~~~~~~----------------------~~~~~~~~li~~~l~~dp~~Rps~~e~ 265 (284)
T 2a19_B 225 -SKFF--------TDLRDGIISD----------------------IFDKKEKTLLQKLLSKKPEDRPNTSEI 265 (284)
T ss_dssp -HHHH--------HHHHTTCCCT----------------------TSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -HHHH--------HHhhcccccc----------------------cCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 0000 0010100000 122346789999999999999998764
No 247
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5e-37 Score=345.53 Aligned_cols=290 Identities=19% Similarity=0.203 Sum_probs=192.7
Q ss_pred HHHHHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeecccccc-
Q 046598 681 QNLYNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY- 759 (986)
Q Consensus 681 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~- 759 (986)
.+.....++|++.+.||+|+||.||+|++..+++.||||++.... .....+.+|++.++.++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 456677899999999999999999999999889999999986432 334567788888899999999999999754321
Q ss_pred -CCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHH--hcCCCCeEeecCCCCCeEe
Q 046598 760 -QGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLH--HDCQPPIAHCDLKPSNILL 836 (986)
Q Consensus 760 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--~~~~~~ivH~Dlkp~NIll 836 (986)
......++||||+++ +|.+.+.... .....+++..+..++.|++.||.||| +. +|+||||||+||++
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~------~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll 164 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYY------RRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLV 164 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHH------TTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHh------hcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEE
Confidence 223347899999976 5544443111 23456889999999999999999999 87 99999999999999
Q ss_pred cC-CCcEEEcccccceecCCCCCccccccccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCcccccccc
Q 046598 837 DE-DMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGS-EVSISGDVYSYGILLLELITRKKPTDIMFEGDMN 914 (986)
Q Consensus 837 ~~-~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~ 914 (986)
+. ++.+||+|||+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..
T Consensus 165 ~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~ 240 (360)
T 3e3p_A 165 NEADGTLKLCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQ 240 (360)
T ss_dssp ETTTTEEEECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HH
T ss_pred eCCCCcEEEeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HH
Confidence 97 89999999999987643322 2335689999999998765 4899999999999999999999999743221 11
Q ss_pred HHHHHHhhCCCchhHHhhhhcccCCc-chhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 915 LHNLARTALPDHVMDIVDSTLLNDGE-DLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 915 ~~~~~~~~~~~~~~~~~d~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
+....+... ....+.+...-..... +....................+.++.+++.+||+.||++|||++||
T Consensus 241 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~ 312 (360)
T 3e3p_A 241 LHEIVRVLG-CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEA 312 (360)
T ss_dssp HHHHHHHHC-CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHcC-CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHH
Confidence 122221111 1111111111000000 0000000000000001111245678899999999999999998764
No 248
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4.5e-38 Score=355.08 Aligned_cols=257 Identities=11% Similarity=0.026 Sum_probs=177.3
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc---hhHHHHHHHHH---HHhcCCCCcceeeeeecc---cc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH---GAFKSFIAECN---TLKNIRHRNLVKILTACS---GV 757 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~---~l~~l~h~niv~l~~~~~---~~ 757 (986)
..+|.+.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|+. +++. +||||++++..+. +.
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 3458999999999999999999998899999999986432 33456777854 5555 7999888653321 00
Q ss_pred -ccCC---------------CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHH------HHHHHHHHHHHHH
Q 046598 758 -DYQG---------------NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQR------LNISIDVACALNY 815 (986)
Q Consensus 758 -~~~~---------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~------~~i~~qi~~~L~~ 815 (986)
.... ....|+||||++ |+|.+++... ...+++..+ ..++.||+.||+|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---------~~~~~~~~~~~~~vk~~i~~qi~~aL~~ 209 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---------DFVYVFRGDEGILALHILTAQLIRLAAN 209 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---------HHSCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---------ccccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 0000 145899999998 8999999632 122344445 6788999999999
Q ss_pred HHhcCCCCeEeecCCCCCeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccC--CCcCcccchhhHHH
Q 046598 816 LHHDCQPPIAHCDLKPSNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG--SEVSISGDVYSYGI 893 (986)
Q Consensus 816 LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGv 893 (986)
||++ +|+||||||+|||++.++.+||+|||+|+..... .....+|+.|+|||++.+ ..++.++|||||||
T Consensus 210 LH~~---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~ 281 (371)
T 3q60_A 210 LQSK---GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGL 281 (371)
T ss_dssp HHHT---TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHH
T ss_pred HHHC---CCccCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHH
Confidence 9999 9999999999999999999999999999875321 113456799999999987 68999999999999
Q ss_pred HHHHHHhCCCCCCccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhccc
Q 046598 894 LLLELITRKKPTDIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACS 973 (986)
Q Consensus 894 vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl 973 (986)
++|||++|+.||.......... +.... ......... ..+.....+..+.+++.+||
T Consensus 282 il~elltg~~Pf~~~~~~~~~~-------~~~~~---~~~~~~~~~--------------~~~~~~~~~~~~~~li~~~L 337 (371)
T 3q60_A 282 SIYRVWCLFLPFGLVTPGIKGS-------WKRPS---LRVPGTDSL--------------AFGSCTPLPDFVKTLIGRFL 337 (371)
T ss_dssp HHHHHHHSSCSTTBCCTTCTTC-------CCBCC---TTSCCCCSC--------------CCTTSSCCCHHHHHHHHHHT
T ss_pred HHHHHHhCCCCCCCcCcccccc-------hhhhh---hhhcccccc--------------chhhccCCCHHHHHHHHHHc
Confidence 9999999999997543221100 00000 000000000 00000123456789999999
Q ss_pred CCCCCCCCCCCCC
Q 046598 974 MESPEDRMSMTNV 986 (986)
Q Consensus 974 ~~dP~~RPt~~eV 986 (986)
+.||++|||++|+
T Consensus 338 ~~dP~~Rpt~~e~ 350 (371)
T 3q60_A 338 NFDRRRRLLPLEA 350 (371)
T ss_dssp CSSTTTCCCHHHH
T ss_pred CCChhhCCCHHHH
Confidence 9999999998763
No 249
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.1e-37 Score=337.15 Aligned_cols=244 Identities=27% Similarity=0.375 Sum_probs=187.7
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
.++|++.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++++++||||+++++++ ...++..+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~----~~~~~~~~ 91 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVI----VEEKGGLY 91 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEE----CCC--CCE
T ss_pred hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEE----EcCCCceE
Confidence 468999999999999999999886 6899999987532 457889999999999999999999985 23445789
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEcc
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIGD 846 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 846 (986)
+||||+++++|.+++... ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 92 lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~D 160 (278)
T 1byg_A 92 IVTEYMAKGSLVDYLRSR--------GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSD 160 (278)
T ss_dssp EEECCCTTEEHHHHHHHH--------HHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECC
T ss_pred EEEecCCCCCHHHHHHhc--------ccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEee
Confidence 999999999999999521 122478999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCC
Q 046598 847 FGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLARTALPD 925 (986)
Q Consensus 847 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 925 (986)
||+++..... .....+++.|+|||++.+..++.++||||||+++|||+| |+.||...... ....
T Consensus 161 fg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----~~~~----- 225 (278)
T 1byg_A 161 FGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVP----- 225 (278)
T ss_dssp CCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-----GHHH-----
T ss_pred cccccccccc-----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH-----
Confidence 9999754322 122357889999999998899999999999999999998 99998643211 1111
Q ss_pred chhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 926 HVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 926 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+........ ...++.++.+++.+||+.||++|||++||
T Consensus 226 ----~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l 264 (278)
T 1byg_A 226 ----RVEKGYKMDA------------------PDGCPPAVYEVMKNCWHLDAAMRPSFLQL 264 (278)
T ss_dssp ----HHTTTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ----HHhcCCCCCC------------------cccCCHHHHHHHHHHhcCChhhCCCHHHH
Confidence 0000000000 01234567899999999999999998764
No 250
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.4e-37 Score=344.90 Aligned_cols=256 Identities=25% Similarity=0.395 Sum_probs=194.5
Q ss_pred cCCCCCcccccccceeEEEEEECCCCeEE--EEEEeecc-CchhHHHHHHHHHHHhcC-CCCcceeeeeeccccccCCCc
Q 046598 688 DRFSSVNQIGEGSFGSVFKGILDDGRTTI--AVKVFNLL-HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 688 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~v--avK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 763 (986)
++|++.+.||+|+||.||+|++..++..+ |+|+++.. .....+.+.+|+++++++ +||||+++++++ ..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~-----~~~~ 99 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHRG 99 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEE-----EETT
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceee-----eeCC
Confidence 67999999999999999999998777755 99988642 234456789999999999 999999999994 4557
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCc------cccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEec
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDE------TDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLD 837 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 837 (986)
..++||||+++++|.+++........ .......+++.+++.++.||+.||+|||++ +|+||||||+||+++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~ 176 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG 176 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEc
Confidence 89999999999999999964321000 001234689999999999999999999999 999999999999999
Q ss_pred CCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHH
Q 046598 838 EDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLH 916 (986)
Q Consensus 838 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~ 916 (986)
.++.+||+|||+++.... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||..... .
T Consensus 177 ~~~~~kL~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-----~ 248 (327)
T 1fvr_A 177 ENYVAKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----A 248 (327)
T ss_dssp GGGCEEECCTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----H
T ss_pred CCCeEEEcccCcCccccc---cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-----H
Confidence 999999999999974321 112223457889999999988899999999999999999998 9999863211 1
Q ss_pred HHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 917 NLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 917 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
..... +........ ...++.++.+++.+||+.||++|||++|+
T Consensus 249 ~~~~~---------~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~el 291 (327)
T 1fvr_A 249 ELYEK---------LPQGYRLEK------------------PLNCDDEVYDLMRQCWREKPYERPSFAQI 291 (327)
T ss_dssp HHHHH---------GGGTCCCCC------------------CTTBCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHH---------hhcCCCCCC------------------CCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 11110 000000000 01223457899999999999999998763
No 251
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-37 Score=349.01 Aligned_cols=247 Identities=23% Similarity=0.279 Sum_probs=192.0
Q ss_pred hcCCCCCcccccccceeEEEEEEC---CCCeEEEEEEeeccC----chhHHHHHHHHHHHhcC-CCCcceeeeeeccccc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILD---DGRTTIAVKVFNLLH----HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVD 758 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 758 (986)
.++|++.+.||+|+||.||+|++. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~---- 128 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF---- 128 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE----
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEE----
Confidence 468999999999999999999984 468999999986422 23345677899999999 699999999984
Q ss_pred cCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecC
Q 046598 759 YQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDE 838 (986)
Q Consensus 759 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 838 (986)
..+...++||||+++++|.+++.. ...+++.+++.++.||+.||+|||+. +|+||||||+||+++.
T Consensus 129 -~~~~~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~ 194 (355)
T 1vzo_A 129 -QTETKLHLILDYINGGELFTHLSQ----------RERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDS 194 (355)
T ss_dssp -EETTEEEEEECCCCSCBHHHHHHH----------HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred -eeCceEEEEeecCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECC
Confidence 455789999999999999999952 23589999999999999999999999 9999999999999999
Q ss_pred CCcEEEcccccceecCCCCCccccccccccccccccccccC--CCcCcccchhhHHHHHHHHHhCCCCCCccccccccHH
Q 046598 839 DMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG--SEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLH 916 (986)
Q Consensus 839 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~ 916 (986)
++.+||+|||+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ...
T Consensus 195 ~~~~kl~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~ 272 (355)
T 1vzo_A 195 NGHVVLTDFGLSKEFVADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQA 272 (355)
T ss_dssp TSCEEESCSSEEEECCGGG-GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHH
T ss_pred CCcEEEeeCCCCeecccCC-CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHH
Confidence 9999999999998654222 222334579999999999886 357899999999999999999999996432211 111
Q ss_pred HHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCC
Q 046598 917 NLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRM 981 (986)
Q Consensus 917 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 981 (986)
.... ......+. ...+.+..+.+++.+||+.||++||
T Consensus 273 ~~~~------------~~~~~~~~----------------~~~~~~~~~~~li~~~L~~dP~~R~ 309 (355)
T 1vzo_A 273 EISR------------RILKSEPP----------------YPQEMSALAKDLIQRLLMKDPKKRL 309 (355)
T ss_dssp HHHH------------HHHHCCCC----------------CCTTSCHHHHHHHHHHTCSSGGGST
T ss_pred HHHH------------HHhccCCC----------------CCcccCHHHHHHHHHHhhhCHHHhc
Confidence 1111 11101000 0012234577899999999999999
No 252
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=354.73 Aligned_cols=301 Identities=19% Similarity=0.182 Sum_probs=184.1
Q ss_pred CCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEc
Q 046598 86 SFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISV 165 (986)
Q Consensus 86 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 165 (986)
+.++.|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 45666666666666666666666666666666666666666666666666666666666666555555666666666666
Q ss_pred cCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceeecccccccccCCccccCCCCccEEeccccccccc
Q 046598 166 NDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGA 245 (986)
Q Consensus 166 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~ 245 (986)
++|++++..|..|.++++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..+.++++|+.|+++.|.+.+.
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~ 191 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAI 191 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEE
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEe
Confidence 66666666666666666666666666666666666666666666666666666655455566666666666666666643
Q ss_pred cCCcccccccccceEEecCceecccCCccccCCCCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccc
Q 046598 246 IPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFL 325 (986)
Q Consensus 246 ~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l 325 (986)
. ...+..+++|+.|++++|.+.+.+|.......+|+.|++++|+++.+++.
T Consensus 192 ~-~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~---------------------------- 242 (477)
T 2id5_A 192 R-DYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYL---------------------------- 242 (477)
T ss_dssp C-TTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHH----------------------------
T ss_pred C-hhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHH----------------------------
Confidence 3 33334566777777777666666666655556777777777766644321
Q ss_pred cccccccccceeeccccccccCCCcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCC
Q 046598 326 CSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQ 405 (986)
Q Consensus 326 ~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 405 (986)
.+..+ ++|+.|+|++|.|++..+..|..+++|++|+|++|++++..|..|..++
T Consensus 243 -~~~~l-------------------------~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 296 (477)
T 2id5_A 243 -AVRHL-------------------------VYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLN 296 (477)
T ss_dssp -HHTTC-------------------------TTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCT
T ss_pred -HhcCc-------------------------cccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcc
Confidence 01111 3345555555555555555555555555555555555555555555555
Q ss_pred CCCEEEccCccceeecCcccccc-cccEEEecccccC
Q 046598 406 NLKDLRLQRNRFQGNIPPSIGNL-KLFILYLSYNFLQ 441 (986)
Q Consensus 406 ~L~~L~Ls~N~l~~~~~~~~~~~-~L~~L~L~~N~l~ 441 (986)
+|+.|+|++|+|++..+..|..+ +|++|+|++|.+.
T Consensus 297 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 297 YLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp TCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred cCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCcc
Confidence 55555555555555444444433 3555666666554
No 253
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=370.05 Aligned_cols=248 Identities=22% Similarity=0.366 Sum_probs=190.9
Q ss_pred CCCCCc-ccccccceeEEEEEEC--CCCeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 689 RFSSVN-QIGEGSFGSVFKGILD--DGRTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 689 ~y~~~~-~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
++.+.+ .||+|+||.||+|.+. .++..||||+++... ....+++.+|++++++++||||++++++|. . +.
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~-----~-~~ 409 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-----A-EA 409 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEE-----S-SS
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEec-----c-CC
Confidence 344444 7999999999999885 346779999997542 345678999999999999999999999963 2 45
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHI 844 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 844 (986)
.++||||+++|+|.+++.. ....+++.++..|+.||+.||+|||++ +|+||||||+|||++.++.+||
T Consensus 410 ~~lv~E~~~~g~L~~~l~~---------~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL 477 (613)
T 2ozo_A 410 LMLVMEMAGGGPLHKFLVG---------KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKI 477 (613)
T ss_dssp EEEEEECCTTCBHHHHHTT---------CTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEE
T ss_pred eEEEEEeCCCCcHHHHHhh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEE
Confidence 8999999999999999952 234689999999999999999999999 9999999999999999999999
Q ss_pred cccccceecCCCCC-ccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHHhh
Q 046598 845 GDFGLARFLPLSSA-QTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLARTA 922 (986)
Q Consensus 845 ~DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~ 922 (986)
+|||+++....... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 478 ~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~----- 550 (613)
T 2ozo_A 478 SDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMA----- 550 (613)
T ss_dssp CCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHHH-----
T ss_pred eeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHH-----
Confidence 99999987643222 112223346789999999998999999999999999999998 99999743221 1111
Q ss_pred CCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 923 LPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 923 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+..... ...+..++.++.+++.+||+.||++|||+++|
T Consensus 551 -------~i~~~~~------------------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l 589 (613)
T 2ozo_A 551 -------FIEQGKR------------------MECPPECPPELYALMSDCWIYKWEDRPDFLTV 589 (613)
T ss_dssp -------HHHTTCC------------------CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHH
T ss_pred -------HHHcCCC------------------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 1110000 00011345678899999999999999998764
No 254
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=4.6e-37 Score=336.27 Aligned_cols=202 Identities=29% Similarity=0.450 Sum_probs=171.0
Q ss_pred cCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC--chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 688 DRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 688 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++ ..++..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 77 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI-----HTENKL 77 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEE-----ecCCce
Confidence 67999999999999999999999889999999986432 22346788999999999999999999994 445789
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEc
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIG 845 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 845 (986)
++||||++ ++|.+++.... ...+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 78 ~lv~e~~~-~~L~~~~~~~~--------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~ 145 (299)
T 2r3i_A 78 YLVFEFLH-QDLKKFMDASA--------LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLA 145 (299)
T ss_dssp EEEEECCS-EEHHHHHHHTT--------TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEEC
T ss_pred EEEEEccc-CCHHHHHHhhh--------ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEEC
Confidence 99999996 69999986322 23588999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCccccccccccccccccccccCCC-cCcccchhhHHHHHHHHHhCCCCCCcc
Q 046598 846 DFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSE-VSISGDVYSYGILLLELITRKKPTDIM 908 (986)
Q Consensus 846 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlGvvl~elltg~~pf~~~ 908 (986)
|||.++...... .......+++.|+|||++.+.. ++.++|||||||++|+|++|+.||...
T Consensus 146 dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 207 (299)
T 2r3i_A 146 DFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207 (299)
T ss_dssp STTHHHHHCCCS--BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cchhhhhccCCc--cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 999997654322 1223356899999999988765 799999999999999999999999743
No 255
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.1e-37 Score=344.53 Aligned_cols=269 Identities=16% Similarity=0.239 Sum_probs=198.9
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchh-----------------HHHHHHHHHHHhcCCCCccee
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGA-----------------FKSFIAECNTLKNIRHRNLVK 749 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~ 749 (986)
.++|++.+.||+|+||.||+|.+ +++.||||++....... .+.+.+|++++++++||||++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 46899999999999999999999 58999999997432111 178999999999999999999
Q ss_pred eeeeccccccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHh-cCCCCeEeec
Q 046598 750 ILTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHH-DCQPPIAHCD 828 (986)
Q Consensus 750 l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~D 828 (986)
+++++ ...+..++||||+++++|.+++...... .......+++..++.++.|++.||+|||+ . ||+|||
T Consensus 108 ~~~~~-----~~~~~~~lv~e~~~~~~L~~~~~~~~~l--~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~d 177 (348)
T 2pml_X 108 CEGII-----TNYDEVYIIYEYMENDSILKFDEYFFVL--DKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRD 177 (348)
T ss_dssp CSEEE-----ESSSEEEEEEECCTTCBSSEESSSEESS--CSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCC
T ss_pred EEEEE-----eeCCeEEEEEeccCCCcHHHHHHHhhhh--hhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecC
Confidence 99994 4557899999999999999994321100 01124579999999999999999999999 8 999999
Q ss_pred CCCCCeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccCC-CcCc-ccchhhHHHHHHHHHhCCCCCC
Q 046598 829 LKPSNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGS-EVSI-SGDVYSYGILLLELITRKKPTD 906 (986)
Q Consensus 829 lkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDvwSlGvvl~elltg~~pf~ 906 (986)
|||+||+++.++.+||+|||.+...... ......|+..|+|||++.+. .++. ++|||||||++|||++|+.||.
T Consensus 178 l~p~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 253 (348)
T 2pml_X 178 VKPSNILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253 (348)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CChHhEEEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999875332 23345689999999999887 6766 9999999999999999999997
Q ss_pred ccccccccHHHHHHhhC--CCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCC
Q 046598 907 IMFEGDMNLHNLARTAL--PDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMT 984 (986)
Q Consensus 907 ~~~~~~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 984 (986)
................. +........+. ............+.++.+++.+||+.||++|||++
T Consensus 254 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ 318 (348)
T 2pml_X 254 LKISLVELFNNIRTKNIEYPLDRNHFLYPL---------------TNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSE 318 (348)
T ss_dssp CSSCSHHHHHHHTSCCCCCCCSSSSSTTTT---------------CC--------CCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred CCCcHHHHHHHHhccCcCCccchhhhhccc---------------cccccccchhhcCHHHHHHHHHHccCChhhCCCHH
Confidence 43221111111111000 00000000000 00000011123455688999999999999999987
Q ss_pred CC
Q 046598 985 NV 986 (986)
Q Consensus 985 eV 986 (986)
|+
T Consensus 319 e~ 320 (348)
T 2pml_X 319 DA 320 (348)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 256
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.2e-38 Score=350.79 Aligned_cols=261 Identities=14% Similarity=0.153 Sum_probs=194.2
Q ss_pred hcCCCCCcccccccceeEEEEEECC--------CCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccc--
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDD--------GRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSG-- 756 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-- 756 (986)
.++|++.+.||+|+||.||+|++.. .++.||||++... +.+.+|++++++++||||+++++....
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3689999999999999999999987 3789999998743 467899999999999999984332110
Q ss_pred ---------cccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEee
Q 046598 757 ---------VDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHC 827 (986)
Q Consensus 757 ---------~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~ 827 (986)
.....+...++||||+ +++|.+++... ....+++.+++.|+.||+.||+|||++ +|+||
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--------~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~ 183 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS--------PKHVLSERSVLQVACRLLDALEFLHEN---EYVHG 183 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS--------GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCS
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC--------CcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCC
Confidence 0122367899999999 99999999632 135699999999999999999999999 99999
Q ss_pred cCCCCCeEecCCC--cEEEcccccceecCCCCCc-----cccccccccccccccccccCCCcCcccchhhHHHHHHHHHh
Q 046598 828 DLKPSNILLDEDM--IAHIGDFGLARFLPLSSAQ-----TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT 900 (986)
Q Consensus 828 Dlkp~NIll~~~~--~~kL~DFG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt 900 (986)
||||+||+++.++ .+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 184 Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 263 (352)
T 2jii_A 184 NVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLY 263 (352)
T ss_dssp CCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHh
Confidence 9999999999998 9999999999866432211 11233479999999999999999999999999999999999
Q ss_pred CCCCCCccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCC
Q 046598 901 RKKPTDIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDR 980 (986)
Q Consensus 901 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R 980 (986)
|+.||................. . ..+....... ......+.++.+++.+||+.||++|
T Consensus 264 g~~pf~~~~~~~~~~~~~~~~~--------~-----~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~R 321 (352)
T 2jii_A 264 GFLPWTNCLPNTEDIMKQKQKF--------V-----DKPGPFVGPC---------GHWIRPSETLQKYLKVVMALTYEEK 321 (352)
T ss_dssp SCCTTGGGTTCHHHHHHHHHHH--------H-----HSCCCEECTT---------SCEECCCHHHHHHHHHHHTCCTTCC
T ss_pred CCCCcccCCcCHHHHHHHHHhc--------c-----CChhhhhhhc---------cccCCCcHHHHHHHHHHHhCChhhC
Confidence 9999974432211111111100 0 0000000000 0000123567899999999999999
Q ss_pred CCCCCC
Q 046598 981 MSMTNV 986 (986)
Q Consensus 981 Pt~~eV 986 (986)
||++||
T Consensus 322 ps~~~l 327 (352)
T 2jii_A 322 PPYAML 327 (352)
T ss_dssp CCHHHH
T ss_pred CCHHHH
Confidence 998764
No 257
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=5.1e-37 Score=350.50 Aligned_cols=282 Identities=21% Similarity=0.255 Sum_probs=202.3
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCC--------CCcceeeeeeccccc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIR--------HRNLVKILTACSGVD 758 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~~~~ 758 (986)
.++|++.++||+|+||+||+|++..+++.||||+++.. ....+.+.+|+++++.++ |+||+++++++...
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~- 113 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS- 113 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE-
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec-
Confidence 47899999999999999999999999999999999743 334577889999999885 78899999986422
Q ss_pred cCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecC
Q 046598 759 YQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDE 838 (986)
Q Consensus 759 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 838 (986)
.......++||||+ ++++.+++... ....+++.+++.|+.||+.||+|||+++ ||+||||||+|||++.
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~--------~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~ 182 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKS--------NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSV 182 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHT--------TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECC
T ss_pred CCCCceEEEEEecc-CccHHHHHHhc--------ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEec
Confidence 22556899999999 66666666421 2246899999999999999999999852 8999999999999997
Q ss_pred CC-------------------------------------------------cEEEcccccceecCCCCCccccccccccc
Q 046598 839 DM-------------------------------------------------IAHIGDFGLARFLPLSSAQTSSIGAKGSI 869 (986)
Q Consensus 839 ~~-------------------------------------------------~~kL~DFG~a~~~~~~~~~~~~~~~~gt~ 869 (986)
++ .+||+|||.++..... .....||+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~ 257 (397)
T 1wak_A 183 NEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTR 257 (397)
T ss_dssp CHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCG
T ss_pred cchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCC
Confidence 75 7999999999876422 23356899
Q ss_pred cccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccH----HHHHHhhCCCchhHHh-hhhcc-----cCC
Q 046598 870 GYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNL----HNLARTALPDHVMDIV-DSTLL-----NDG 939 (986)
Q Consensus 870 ~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~~-d~~l~-----~~~ 939 (986)
.|+|||++.+..++.++|||||||++|||++|+.||.......... ...............+ ..... ...
T Consensus 258 ~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 337 (397)
T 1wak_A 258 QYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKG 337 (397)
T ss_dssp GGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTS
T ss_pred cccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcc
Confidence 9999999999999999999999999999999999997543322111 0111111111000000 00000 000
Q ss_pred -----cchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 940 -----EDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 940 -----~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+..................+...++.+++.+||+.||++|||++||
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~ 389 (397)
T 1wak_A 338 DLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAEC 389 (397)
T ss_dssp SBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHH
T ss_pred ccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHH
Confidence 00000000000111112234567789999999999999999999764
No 258
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.7e-37 Score=353.72 Aligned_cols=279 Identities=20% Similarity=0.228 Sum_probs=195.0
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeecccccc-CCCceE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY-QGNDFK 765 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~~~ 765 (986)
..+|++.+.||+|+||.||+|++..+++.||||++.... +...+|++++++++||||++++++|..... .+....
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 447999999999999999999999889999999986432 223479999999999999999998754321 233456
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCC-CcEEE
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDED-MIAHI 844 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kL 844 (986)
++||||+++ ++.+.+.... .....+++..++.++.||++||+|||++ +|+||||||+|||++.+ +.+||
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~------~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl 198 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYS------RAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKL 198 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHH------HTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEE
T ss_pred Eeehhcccc-cHHHHHHHHh------hccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEe
Confidence 799999975 6666654211 2235689999999999999999999999 99999999999999965 57899
Q ss_pred cccccceecCCCCCccccccccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhC
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGS-EVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTAL 923 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 923 (986)
+|||+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+.......
T Consensus 199 ~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~l- 273 (420)
T 1j1b_A 199 CDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVL- 273 (420)
T ss_dssp CCCTTCEECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHH-
T ss_pred ccchhhhhcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHh-
Confidence 99999987643222 2335689999999998765 7999999999999999999999999743221 1122222111
Q ss_pred CCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 924 PDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 924 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.....+.+... .....+...... .............+.++.+++.+||+.||++|||+.|+
T Consensus 274 g~p~~~~~~~~-~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~ 334 (420)
T 1j1b_A 274 GTPTREQIREM-NPNYTEFKFPQI-KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 334 (420)
T ss_dssp CSCCHHHHHHH-CSCCCCCCCCCC-CCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred CCCCHHHHHhh-ChhhhhhccCcc-CCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHH
Confidence 11111111111 000000000000 00000000001234567899999999999999998753
No 259
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.3e-37 Score=367.17 Aligned_cols=249 Identities=29% Similarity=0.463 Sum_probs=197.7
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceE
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
..++|++.++||+|+||.||+|.+.. +..||||+++... ...+++.+|++++++++||||++++++|. + +..
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~-~~~ 336 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-----E-EPI 336 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-----S-SSC
T ss_pred chhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEe-----e-ccc
Confidence 35678899999999999999999986 5779999997643 33578999999999999999999999853 2 568
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEc
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIG 845 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 845 (986)
++||||+++|+|.++++.. ....+++.+++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 337 ~lv~e~~~~gsL~~~l~~~--------~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~ 405 (535)
T 2h8h_A 337 YIVTEYMSKGSLLDFLKGE--------TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVA 405 (535)
T ss_dssp EEEECCCTTEEHHHHHSHH--------HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEEC
T ss_pred eEeeehhcCCcHHHHHhhc--------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEc
Confidence 9999999999999999521 224589999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCC
Q 046598 846 DFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLARTALP 924 (986)
Q Consensus 846 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 924 (986)
|||+++..... .........++..|+|||++.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 406 DFG~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-----~~~~---- 475 (535)
T 2h8h_A 406 DFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLD---- 475 (535)
T ss_dssp CTTSTTTCCCH-HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----HHHH----
T ss_pred ccccceecCCC-ceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH----
Confidence 99999865321 1122233456789999999998899999999999999999999 99998632211 1111
Q ss_pred CchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 925 DHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 925 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+...... +....++.++.+++.+||+.||++|||+++|
T Consensus 476 -----~i~~~~~~------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l 514 (535)
T 2h8h_A 476 -----QVERGYRM------------------PCPPECPESLHDLMCQCWRKEPEERPTFEYL 514 (535)
T ss_dssp -----HHHTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -----HHHcCCCC------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 11100000 0011344567899999999999999998764
No 260
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.3e-36 Score=337.01 Aligned_cols=198 Identities=25% Similarity=0.353 Sum_probs=170.2
Q ss_pred hcCCCCCcccccccceeEEEEEE-CCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCc------ceeeeeecccccc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGIL-DDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRN------LVKILTACSGVDY 759 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 759 (986)
.++|++.+.||+|+||.||+|.+ ..+++.||||+++.. ....+.+.+|+++++.++|++ ++++++++
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~----- 86 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF----- 86 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE-----
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc-----
Confidence 46899999999999999999998 557899999999753 234567889999999887654 89999984
Q ss_pred CCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecC-
Q 046598 760 QGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDE- 838 (986)
Q Consensus 760 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~- 838 (986)
...+..++||||+ +++|.+++.... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.
T Consensus 87 ~~~~~~~lv~e~~-~~~l~~~l~~~~--------~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~ 154 (339)
T 1z57_A 87 EHHGHICIVFELL-GLSTYDFIKENG--------FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQS 154 (339)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHHTT--------TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCC
T ss_pred ccCCcEEEEEcCC-CCCHHHHHHhcC--------CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEecc
Confidence 4557899999999 899999996322 23588999999999999999999999 9999999999999987
Q ss_pred ------------------CCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh
Q 046598 839 ------------------DMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT 900 (986)
Q Consensus 839 ------------------~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt 900 (986)
++.+||+|||.++..... .....||+.|+|||++.+..++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 229 (339)
T 1z57_A 155 DYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL 229 (339)
T ss_dssp CEEEEEC----CEEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHH
T ss_pred ccccccCCccccccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHh
Confidence 668999999999864322 223568999999999999999999999999999999999
Q ss_pred CCCCCCc
Q 046598 901 RKKPTDI 907 (986)
Q Consensus 901 g~~pf~~ 907 (986)
|+.||..
T Consensus 230 g~~pf~~ 236 (339)
T 1z57_A 230 GFTVFPT 236 (339)
T ss_dssp SSCSCCC
T ss_pred CCCCCCC
Confidence 9999974
No 261
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.7e-36 Score=334.91 Aligned_cols=279 Identities=17% Similarity=0.221 Sum_probs=254.6
Q ss_pred hhccCcCCCHhHHHHHHHHHHhccCCCcCCCCCC----CCCCCCCcceeeEecC--------CCCeEEEEeccCCCCccc
Q 046598 10 VTASTVAGNETDRLALLELKSKITHDPLGVLASW----NESSHFCQWRGVTCSR--------RHQRVTILDLESLKLAGS 77 (986)
Q Consensus 10 ~~~~~~~~~~~~~~~ll~~k~~~~~~~~~~l~~w----~~~~~~c~w~gv~c~~--------~~~~v~~l~l~~~~l~~~ 77 (986)
+.+-..++..+|++||++||+++..||.+++++| ....++|.|.||.|+. ...+|+.|||++++++ .
T Consensus 17 ~~~~~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~ 95 (328)
T 4fcg_A 17 LYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-Q 95 (328)
T ss_dssp CCCC--CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-S
T ss_pred eeeeccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-h
Confidence 3344455678999999999999977998899999 4567899999999953 3468999999999999 8
Q ss_pred cCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccC-
Q 046598 78 ISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSS- 156 (986)
Q Consensus 78 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~- 156 (986)
+|+.++.+++|++|+|++|.++ .+|..|+++++|++|+|++|+++ .+|..|+.+++|++|+|++|.+.+.+|..+..
T Consensus 96 lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~ 173 (328)
T 4fcg_A 96 FPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAST 173 (328)
T ss_dssp CCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE
T ss_pred cChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhc
Confidence 8999999999999999999999 89999999999999999999999 88999999999999999999999999988765
Q ss_pred --------CCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceeecccccccccCCccccC
Q 046598 157 --------LSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFN 228 (986)
Q Consensus 157 --------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 228 (986)
+++|++|+|++|+++ .+|..++++++|++|+|++|++++ +|..|+.+++|++|+|++|++.+.+|..+.+
T Consensus 174 ~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~ 251 (328)
T 4fcg_A 174 DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGG 251 (328)
T ss_dssp C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTC
T ss_pred cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcC
Confidence 999999999999999 889999999999999999999994 6778999999999999999999999999999
Q ss_pred CCCccEEeccccccccccCCcccccccccceEEecCceecccCCccccCCCCCcEEecccccccCC
Q 046598 229 ISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLTGA 294 (986)
Q Consensus 229 l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~ 294 (986)
+++|+.|++++|.+.+.+|..+. .+++|++|+|++|.+.+.+|..++++++|+.+++..|.+...
T Consensus 252 l~~L~~L~L~~n~~~~~~p~~~~-~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~l 316 (328)
T 4fcg_A 252 RAPLKRLILKDCSNLLTLPLDIH-RLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQL 316 (328)
T ss_dssp CCCCCEEECTTCTTCCBCCTTGG-GCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC-
T ss_pred CCCCCEEECCCCCchhhcchhhh-cCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHHH
Confidence 99999999999999999998764 799999999999999999999999999999999998877643
No 262
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=6.4e-37 Score=335.77 Aligned_cols=257 Identities=24% Similarity=0.309 Sum_probs=190.9
Q ss_pred hhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccc-------
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD------- 758 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 758 (986)
..++|++.+.||+|+||.||+|++..+++.||||+++.. ....+.+.+|++++++++||||+++++++....
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 356799999999999999999999988999999999653 344578899999999999999999999864321
Q ss_pred -cCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEec
Q 046598 759 -YQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLD 837 (986)
Q Consensus 759 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 837 (986)
.......++||||+++++|.+++.. ....+++.+++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~ 150 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHS---------ENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFID 150 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHH---------SCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhc---------cccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEc
Confidence 1335778999999999999999962 234578899999999999999999999 999999999999999
Q ss_pred CCCcEEEcccccceecCCCCC------------ccccccccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCC
Q 046598 838 EDMIAHIGDFGLARFLPLSSA------------QTSSIGAKGSIGYIAPEYGLGS-EVSISGDVYSYGILLLELITRKKP 904 (986)
Q Consensus 838 ~~~~~kL~DFG~a~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvvl~elltg~~p 904 (986)
.++.+||+|||.++....... ........|++.|+|||++.+. .++.++|||||||++|||++ |
T Consensus 151 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p 227 (303)
T 1zy4_A 151 ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---P 227 (303)
T ss_dssp TTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---C
T ss_pred CCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---c
Confidence 999999999999986542210 1122345689999999998764 78999999999999999998 5
Q ss_pred CCccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCC
Q 046598 905 TDIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMT 984 (986)
Q Consensus 905 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 984 (986)
|...... ...... +.......+.+ .....+..+.+++.+||+.||++|||++
T Consensus 228 ~~~~~~~----~~~~~~---------~~~~~~~~~~~---------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ 279 (303)
T 1zy4_A 228 FSTGMER----VNILKK---------LRSVSIEFPPD---------------FDDNKMKVEKKIIRLLIDHDPNKRPGAR 279 (303)
T ss_dssp CSSHHHH----HHHHHH---------HHSTTCCCCTT---------------CCTTTSHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cCCchhH----HHHHHh---------ccccccccCcc---------------ccccchHHHHHHHHHHHhcCcccCcCHH
Confidence 4321110 011000 00000000000 0012234567899999999999999987
Q ss_pred CC
Q 046598 985 NV 986 (986)
Q Consensus 985 eV 986 (986)
|+
T Consensus 280 ~l 281 (303)
T 1zy4_A 280 TL 281 (303)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 263
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.2e-37 Score=344.83 Aligned_cols=200 Identities=26% Similarity=0.327 Sum_probs=167.6
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcCCCCcceeeeeeccccc-cCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-YQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~ 763 (986)
.++|.+.+.||+|+||.||+|.+..+++.||||++... .....+++.+|+.+++.++||||+++++++.... .....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 46899999999999999999999999999999998643 2233567889999999999999999999864321 11123
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..++||||++ ++|.+++. ..+++.++..++.||+.||+|||++ ||+||||||+||+++.++.+|
T Consensus 103 ~~~lv~e~~~-~~l~~~~~------------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~k 166 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG------------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELK 166 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT------------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEE
T ss_pred eEEEEecccc-CCHHHHhc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEE
Confidence 4699999996 68888773 2489999999999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCc
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG-SEVSISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
|+|||+++..... .....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||..
T Consensus 167 l~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 226 (353)
T 3coi_A 167 ILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 226 (353)
T ss_dssp ECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBS
T ss_pred EeecccccCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999764321 234568999999999877 6789999999999999999999999974
No 264
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=9.6e-37 Score=338.18 Aligned_cols=207 Identities=28% Similarity=0.435 Sum_probs=173.6
Q ss_pred hhcCCCCCcccccccceeEEEEEEC-CCCeEEEEEEeeccCc--hhHHHHHHHHHHHhcC---CCCcceeeeeecccccc
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILD-DGRTTIAVKVFNLLHH--GAFKSFIAECNTLKNI---RHRNLVKILTACSGVDY 759 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~ 759 (986)
+.++|++.+.||+|+||.||+|++. .+++.||+|+++.... .....+.+|+.+++.+ +||||++++++|.....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 4678999999999999999999995 6689999999864322 2234566777777666 89999999999753333
Q ss_pred CCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCC
Q 046598 760 QGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDED 839 (986)
Q Consensus 760 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 839 (986)
......++||||++ |+|.+++.... ...+++.+++.++.||+.||+|||+. ||+||||||+||+++.+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~--------~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~ 156 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVP--------EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSS 156 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSC--------TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTT
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcc--------cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCC
Confidence 45678999999997 69999996322 23589999999999999999999999 99999999999999999
Q ss_pred CcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCc
Q 046598 840 MIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 840 ~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
+.+||+|||.++.... ........|++.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 157 ~~~kl~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 221 (326)
T 1blx_A 157 GQIKLADFGLARIYSF---QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 221 (326)
T ss_dssp CCEEECSCCSCCCCCG---GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCEEEecCcccccccC---CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCC
Confidence 9999999999976532 2223345689999999999999999999999999999999999999974
No 265
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=4.2e-37 Score=338.82 Aligned_cols=258 Identities=22% Similarity=0.365 Sum_probs=192.0
Q ss_pred cChHHHHHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc--CchhHHHHHHHHHHHhcCC--CCcceeeeee
Q 046598 678 ISYQNLYNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL--HHGAFKSFIAECNTLKNIR--HRNLVKILTA 753 (986)
Q Consensus 678 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~ 753 (986)
+.++.+....++|++.+.||+|+||.||+|.+.. ++.||||++... .....+.+.+|++++++++ ||||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~ 96 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY 96 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCC-CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence 3344444456789999999999999999999875 788999999643 3344578899999999997 5999999998
Q ss_pred ccccccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCC
Q 046598 754 CSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSN 833 (986)
Q Consensus 754 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~N 833 (986)
+ ..+...++||| +.+++|.+++.. ...+++.+++.++.|++.||+|||+. +|+||||||+|
T Consensus 97 ~-----~~~~~~~lv~e-~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~N 157 (313)
T 3cek_A 97 E-----ITDQYIYMVME-CGNIDLNSWLKK----------KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPAN 157 (313)
T ss_dssp E-----ECSSEEEEEEC-CCSEEHHHHHHH----------CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred e-----ecCCEEEEEEe-cCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCccc
Confidence 4 45578999999 558899999952 24688999999999999999999999 99999999999
Q ss_pred eEecCCCcEEEcccccceecCCCCCccccccccccccccccccccC-----------CCcCcccchhhHHHHHHHHHhCC
Q 046598 834 ILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG-----------SEVSISGDVYSYGILLLELITRK 902 (986)
Q Consensus 834 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwSlGvvl~elltg~ 902 (986)
|++++ +.+||+|||+++...............|++.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 158 Il~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~ 236 (313)
T 3cek_A 158 FLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236 (313)
T ss_dssp EEEET-TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSS
T ss_pred EEEEC-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCC
Confidence 99964 8999999999987644333333344568999999999875 47889999999999999999999
Q ss_pred CCCCccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 046598 903 KPTDIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMS 982 (986)
Q Consensus 903 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt 982 (986)
.||.......... ...++......... ..+.++.+++.+||+.||++|||
T Consensus 237 ~pf~~~~~~~~~~------------~~~~~~~~~~~~~~------------------~~~~~l~~li~~~l~~dp~~Rps 286 (313)
T 3cek_A 237 TPFQQIINQISKL------------HAIIDPNHEIEFPD------------------IPEKDLQDVLKCCLKRDPKQRIS 286 (313)
T ss_dssp CTTTTCCSHHHHH------------HHHHCTTSCCCCCC------------------CSCHHHHHHHHHHTCSSTTTSCC
T ss_pred CchhhHHHHHHHH------------HHHHhcccccCCcc------------------cchHHHHHHHHHHccCCcccCcC
Confidence 9996432211111 11111111100000 11345778999999999999999
Q ss_pred CCCC
Q 046598 983 MTNV 986 (986)
Q Consensus 983 ~~eV 986 (986)
++||
T Consensus 287 ~~el 290 (313)
T 3cek_A 287 IPEL 290 (313)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 266
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=4.3e-37 Score=368.41 Aligned_cols=242 Identities=24% Similarity=0.370 Sum_probs=188.0
Q ss_pred cccccccceeEEEEEE--CCCCeEEEEEEeeccC--chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCceEEEEE
Q 046598 694 NQIGEGSFGSVFKGIL--DDGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVF 769 (986)
Q Consensus 694 ~~lg~G~~g~Vy~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 769 (986)
+.||+|+||.||+|.+ ...++.||||+++... ....+++.+|++++++++||||++++++|. .+..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~------~~~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE------AESWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE------SSSEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe------cCCEEEEE
Confidence 4799999999999965 4456889999997532 234578999999999999999999999863 24578999
Q ss_pred EeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEccccc
Q 046598 770 EFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIGDFGL 849 (986)
Q Consensus 770 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DFG~ 849 (986)
||+++|+|.++++. ...+++.+++.|+.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 449 E~~~~g~L~~~l~~----------~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGl 515 (635)
T 4fl3_A 449 EMAELGPLNKYLQQ----------NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGL 515 (635)
T ss_dssp ECCTTEEHHHHHHH----------CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTH
T ss_pred EccCCCCHHHHHhh----------CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCC
Confidence 99999999999952 24689999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCC-ccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCch
Q 046598 850 ARFLPLSSA-QTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLARTALPDHV 927 (986)
Q Consensus 850 a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 927 (986)
++.+..... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ..
T Consensus 516 a~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-----~~--------- 581 (635)
T 4fl3_A 516 SKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EV--------- 581 (635)
T ss_dssp HHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HH---------
T ss_pred ccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HH---------
Confidence 987643322 122333457889999999999999999999999999999998 99999643221 11
Q ss_pred hHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 928 MDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 928 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.+.+....... .+..++.++.+++.+||+.||++|||+++|
T Consensus 582 ~~~i~~~~~~~------------------~p~~~~~~l~~li~~cl~~dP~~RPs~~~l 622 (635)
T 4fl3_A 582 TAMLEKGERMG------------------CPAGCPREMYDLMNLCWTYDVENRPGFAAV 622 (635)
T ss_dssp HHHHHTTCCCC------------------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHHHcCCCCC------------------CCCCCCHHHHHHHHHHcCCCHhHCcCHHHH
Confidence 11111100000 001345668899999999999999998764
No 267
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=7.2e-37 Score=347.24 Aligned_cols=275 Identities=20% Similarity=0.241 Sum_probs=191.2
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeecccccc-CCCceE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY-QGNDFK 765 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~~~ 765 (986)
..+|++.+.||+|+||.||+|++..+++ ||+|++.... +...+|+++++.++||||+++++++..... .+....
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 4579999999999999999999987655 8888775322 122469999999999999999999754322 334458
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEec-CCCcEEE
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLD-EDMIAHI 844 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kL 844 (986)
++||||++++.+..... .. .....+++..++.++.||++||+|||+. +|+||||||+||+++ .++.+||
T Consensus 114 ~lv~e~~~~~l~~~~~~-~~------~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL 183 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRH-YA------KLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKL 183 (394)
T ss_dssp EEEEECCSEEHHHHHHH-HH------HTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEE
T ss_pred EEEeeccCccHHHHHHH-HH------hhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEE
Confidence 89999997654433321 11 2234689999999999999999999999 999999999999999 7999999
Q ss_pred cccccceecCCCCCccccccccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhC
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGS-EVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTAL 923 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 923 (986)
+|||+|+....... .....+|+.|+|||++.+. .++.++||||+||++|||++|+.||......+ .+.......-
T Consensus 184 ~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g 259 (394)
T 4e7w_A 184 IDFGSAKILIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEIIKVLG 259 (394)
T ss_dssp CCCTTCEECCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHC
T ss_pred eeCCCcccccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhC
Confidence 99999987643322 2345689999999998765 58999999999999999999999997432211 1111111111
Q ss_pred CCchh--HHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCC
Q 046598 924 PDHVM--DIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTN 985 (986)
Q Consensus 924 ~~~~~--~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~e 985 (986)
..... ....+........ ..+............+.++.+++.+||+.||++|||+.|
T Consensus 260 ~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 318 (394)
T 4e7w_A 260 TPSREQIKTMNPNYMEHKFP-----QIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIE 318 (394)
T ss_dssp CCCHHHHHHHCGGGSSSCCC-----CCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred CCCHHHHHhhChhhhhhccc-----cccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHH
Confidence 11100 0011100000000 000000000001123456889999999999999999865
No 268
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=9.8e-37 Score=331.37 Aligned_cols=251 Identities=24% Similarity=0.282 Sum_probs=197.4
Q ss_pred HhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC--chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 685 NATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 685 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
...++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++ ...
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 93 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL-----EDS 93 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECS
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEE-----eCC
Confidence 34678999999999999999999999889999999996532 33467889999999999999999999994 456
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCC---
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDED--- 839 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--- 839 (986)
...++||||+++++|.+++.. ...+++.+++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~ 160 (287)
T 2wei_A 94 SSFYIVGELYTGGELFDEIIK----------RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKD 160 (287)
T ss_dssp SEEEEEECCCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTT
T ss_pred CeEEEEEEccCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCc
Confidence 789999999999999998842 23589999999999999999999999 99999999999999754
Q ss_pred CcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHH
Q 046598 840 MIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLA 919 (986)
Q Consensus 840 ~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~ 919 (986)
+.+||+|||+++....... .....+++.|+|||++.+ .++.++||||||+++|+|++|+.||...... ...
T Consensus 161 ~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~ 231 (287)
T 2wei_A 161 CDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-----DIL 231 (287)
T ss_dssp CCEEECSTTGGGTBCCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHH
T ss_pred ccEEEeccCcceeecCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH-----HHH
Confidence 4799999999986543221 223458899999999876 4899999999999999999999998642211 111
Q ss_pred HhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 920 RTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 920 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
. .+......... +.....+.++.+++.+||+.||++|||++|+
T Consensus 232 ~--------~~~~~~~~~~~----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~el 274 (287)
T 2wei_A 232 K--------RVETGKYAFDL----------------PQWRTISDDAKDLIRKMLTFHPSLRITATQC 274 (287)
T ss_dssp H--------HHHHCCCCCCS----------------GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred H--------HHHcCCCCCCc----------------hhhhhcCHHHHHHHHHHcccChhhCcCHHHH
Confidence 0 00000000000 0001234457899999999999999998764
No 269
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.4e-37 Score=337.03 Aligned_cols=251 Identities=25% Similarity=0.363 Sum_probs=187.5
Q ss_pred hcCCCCCcccccccceeEEEEEECC-C--CeEEEEEEeecc---CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccC
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDD-G--RTTIAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ 760 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 760 (986)
.++|++.+.||+|+||+||+|++.. + +..||||+++.. .....+.+.+|++++++++||||+++++++.
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----- 91 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL----- 91 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEc-----
Confidence 4679999999999999999998643 2 236999998643 3345678999999999999999999999853
Q ss_pred CCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCC
Q 046598 761 GNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDM 840 (986)
Q Consensus 761 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 840 (986)
. ...++||||+++++|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 92 ~-~~~~~v~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~ 158 (291)
T 1u46_A 92 T-PPMKMVTELAPLGSLLDRLRK---------HQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRD 158 (291)
T ss_dssp S-SSCEEEEECCTTCBHHHHHHH---------HGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETT
T ss_pred c-CCceeeEecccCCCHHHHHHh---------ccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCC
Confidence 2 237899999999999999962 234689999999999999999999999 999999999999999999
Q ss_pred cEEEcccccceecCCCCCc-cccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHH
Q 046598 841 IAHIGDFGLARFLPLSSAQ-TSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNL 918 (986)
Q Consensus 841 ~~kL~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~ 918 (986)
.+||+|||+++........ .......++..|+|||++.+..++.++||||||+++|+|++ |+.||..... ...
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~ 233 (291)
T 1u46_A 159 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-----SQI 233 (291)
T ss_dssp EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHH
T ss_pred CEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-----HHH
Confidence 9999999999877543322 12233457889999999998899999999999999999999 9999863321 111
Q ss_pred HHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 919 ARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 919 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.... ..... ..+ ....++.++.+++.+||+.||++|||++||
T Consensus 234 ~~~~--------~~~~~-~~~-----------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 275 (291)
T 1u46_A 234 LHKI--------DKEGE-RLP-----------------RPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 275 (291)
T ss_dssp HHHH--------HTSCC-CCC-----------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHH--------HccCC-CCC-----------------CCcCcCHHHHHHHHHHccCCcccCcCHHHH
Confidence 1100 00000 000 001234567899999999999999998764
No 270
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.3e-37 Score=349.35 Aligned_cols=212 Identities=22% Similarity=0.303 Sum_probs=157.3
Q ss_pred hcCCCC-CcccccccceeEEEEEEC--CCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 687 TDRFSS-VNQIGEGSFGSVFKGILD--DGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 687 ~~~y~~-~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
.+.|++ .++||+|+||+||+|++. .+++.||||+++... ....+.+|++++++++||||+++++++.. ..+.
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~~ 93 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLS---HADR 93 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEE---TTTT
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEec---CCCC
Confidence 344666 458999999999999976 457889999986432 23578899999999999999999998532 3467
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEe----cCC
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILL----DED 839 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~ 839 (986)
..++||||++ ++|.+++....... .......+++..++.|+.||+.||+|||+. +|+||||||+||++ +.+
T Consensus 94 ~~~lv~e~~~-~~l~~~~~~~~~~~-~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 168 (405)
T 3rgf_A 94 KVWLLFDYAE-HDLWHIIKFHRASK-ANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPER 168 (405)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHHHC--------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTT
T ss_pred eEEEEEeCCC-CCHHHHHHHhcccc-ccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCC
Confidence 8999999995 58888875221110 011223589999999999999999999999 99999999999999 677
Q ss_pred CcEEEcccccceecCCCCC-ccccccccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCcc
Q 046598 840 MIAHIGDFGLARFLPLSSA-QTSSIGAKGSIGYIAPEYGLGS-EVSISGDVYSYGILLLELITRKKPTDIM 908 (986)
Q Consensus 840 ~~~kL~DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvvl~elltg~~pf~~~ 908 (986)
+.+||+|||+|+....... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 169 GRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp TCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred CcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 8999999999987643211 1223446789999999998874 5899999999999999999999999643
No 271
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.6e-36 Score=337.13 Aligned_cols=256 Identities=19% Similarity=0.209 Sum_probs=172.4
Q ss_pred hhcCCCCCc-ccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 686 ATDRFSSVN-QIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 686 ~~~~y~~~~-~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
..++|.+.+ .||+|+||.||+|.+..+++.||||++.... ....+....++.++||||+++++++... ...+..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENM-HHGKRC 100 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhc-cCCCce
Confidence 467899865 5999999999999999889999999986421 2222233345667999999999986532 233566
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecC---CCc
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDE---DMI 841 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~ 841 (986)
.++||||+++|+|.+++.... ...+++.+++.++.||+.||+|||+. +|+||||||+||+++. ++.
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~--------~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~ 169 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERG--------DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAV 169 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC---------CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCC
T ss_pred EEEEEeccCCCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCce
Confidence 899999999999999996322 24689999999999999999999999 9999999999999976 455
Q ss_pred EEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHh
Q 046598 842 AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLART 921 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 921 (986)
+||+|||+++..... ......+|+.|+|||++.+..++.++|||||||++|+|++|+.||...........
T Consensus 170 ~kl~Dfg~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~----- 240 (336)
T 3fhr_A 170 LKLTDFGFAKETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG----- 240 (336)
T ss_dssp EEECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------
T ss_pred EEEeccccceecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh-----
Confidence 999999999865422 22335689999999999999999999999999999999999999964322111000
Q ss_pred hCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 922 ALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 922 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
....+.......+. +.....+.++.+++.+||+.||++|||++|+
T Consensus 241 -----~~~~~~~~~~~~~~---------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 285 (336)
T 3fhr_A 241 -----MKRRIRLGQYGFPN---------------PEWSEVSEDAKQLIRLLLKTDPTERLTITQF 285 (336)
T ss_dssp ---------------CCCT---------------TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred -----HHHhhhccccccCc---------------hhhccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 00000000000000 0001234567899999999999999998764
No 272
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2e-36 Score=356.00 Aligned_cols=277 Identities=22% Similarity=0.246 Sum_probs=198.8
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeecc-CchhHHHHHHHHHHHhcCCCCcceeeeeeccccc-cCCCce
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-YQGNDF 764 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~~ 764 (986)
.++|++.+.||+|+||.||+|.+..+++.||||+++.. .....+++.+|++++++++||||+++++++.... +..++.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 47899999999999999999999988999999998653 3344577999999999999999999999865421 234677
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc---
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI--- 841 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--- 841 (986)
.++||||+++|+|.+++.... ....+++..++.|+.|++.||+|||+. ||+||||||+||+++.++.
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~-------~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~ 162 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFE-------NCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLI 162 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSS-------CTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCE
T ss_pred EEEEEEeCCCCCHHHHHHhcc-------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCcee
Confidence 899999999999999996432 123588889999999999999999999 9999999999999997764
Q ss_pred EEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHh
Q 046598 842 AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLART 921 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 921 (986)
+||+|||.++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ...+...
T Consensus 163 vKL~DFG~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~~~~~~~ 235 (676)
T 3qa8_A 163 HKIIDLGYAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ----PVQWHGK 235 (676)
T ss_dssp EEECSCCCCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH----HHHSSTT
T ss_pred EEEccccccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc----hhhhhhh
Confidence 9999999998764332 22345789999999999999999999999999999999999999963211 1111110
Q ss_pred hCCCchhH-HhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 922 ALPDHVMD-IVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 922 ~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
........ ........... .......+ .......+..+.+++.+|+++||++|||++|+
T Consensus 236 i~~~~~~~~~~~~~l~g~~~---~~~~lp~p---~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 236 VREKSNEHIVVYDDLTGAVK---FSSVLPTP---NHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CC------CCSCCCCSSSCC---CCSSSCCS---CCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhcccchhhhhhhhhccccc---cccccCCc---hhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 00000000 00000000000 00000000 00011245668899999999999999999874
No 273
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.8e-36 Score=340.52 Aligned_cols=204 Identities=27% Similarity=0.316 Sum_probs=170.6
Q ss_pred HHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCC-CC-----cceeeeeecccc
Q 046598 684 YNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIR-HR-----NLVKILTACSGV 757 (986)
Q Consensus 684 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~ 757 (986)
....++|++.+.||+|+||+||+|.+..+++.||||+++.. ....+++..|+++++.++ |+ +|+++++++
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~--- 125 (382)
T 2vx3_A 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF--- 125 (382)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE---
T ss_pred CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee---
Confidence 34568999999999999999999999998999999999743 233466778888888774 44 489998884
Q ss_pred ccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEec
Q 046598 758 DYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLD 837 (986)
Q Consensus 758 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 837 (986)
..++..++||||++ ++|.+++.... ...+++..++.++.|++.||.|||++ ..+|+||||||+||+++
T Consensus 126 --~~~~~~~lv~e~~~-~~L~~~l~~~~--------~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~ 193 (382)
T 2vx3_A 126 --MFRNHLCLVFEMLS-YNLYDLLRNTN--------FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLC 193 (382)
T ss_dssp --EETTEEEEEEECCC-CBHHHHHHHTT--------TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEES
T ss_pred --ccCCceEEEEecCC-CCHHHHHhhcC--------cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEe
Confidence 44578999999995 59999996322 23589999999999999999999952 23999999999999995
Q ss_pred --CCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCcc
Q 046598 838 --EDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIM 908 (986)
Q Consensus 838 --~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~ 908 (986)
.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 194 ~~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 194 NPKRSAIKIVDFGSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp STTSCCEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCCCCcEEEEeccCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 4778999999999876422 22356899999999999999999999999999999999999999743
No 274
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=9e-37 Score=336.92 Aligned_cols=241 Identities=20% Similarity=0.241 Sum_probs=194.8
Q ss_pred HhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCch------hHHHHHHHHHHHhcCC--CCcceeeeeeccc
Q 046598 685 NATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHG------AFKSFIAECNTLKNIR--HRNLVKILTACSG 756 (986)
Q Consensus 685 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~~ 756 (986)
...++|++.+.||+|+||.||+|++..+++.||||+++..... ..+.+.+|+.++++++ ||||+++++++
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~-- 117 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF-- 117 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE--
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE--
Confidence 3567899999999999999999999988999999999753221 2245678999999995 59999999994
Q ss_pred cccCCCceEEEEEEeccC-CCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeE
Q 046598 757 VDYQGNDFKALVFEFMHN-RSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNIL 835 (986)
Q Consensus 757 ~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 835 (986)
..++..++||||+.+ ++|.+++.. ...+++..++.++.||+.||+|||+. +|+||||||+||+
T Consensus 118 ---~~~~~~~lv~e~~~~~~~L~~~l~~----------~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl 181 (320)
T 3a99_A 118 ---ERPDSFVLILERPEPVQDLFDFITE----------RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENIL 181 (320)
T ss_dssp ---ECSSEEEEEEECCSSEEEHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred ---ecCCcEEEEEEcCCCCccHHHHHhc----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEE
Confidence 456789999999976 899999952 34689999999999999999999999 9999999999999
Q ss_pred ec-CCCcEEEcccccceecCCCCCccccccccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCccccccc
Q 046598 836 LD-EDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEV-SISGDVYSYGILLLELITRKKPTDIMFEGDM 913 (986)
Q Consensus 836 l~-~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvvl~elltg~~pf~~~~~~~~ 913 (986)
++ .++.+||+|||+++..... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||....
T Consensus 182 l~~~~~~~kL~Dfg~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~---- 253 (320)
T 3a99_A 182 IDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE---- 253 (320)
T ss_dssp EETTTTEEEECCCTTCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----
T ss_pred EeCCCCCEEEeeCccccccccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh----
Confidence 99 7889999999999876432 1223568999999999887665 788999999999999999999986311
Q ss_pred cHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 914 NLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
... ...... + ...+.++.+++.+||+.||++|||++||
T Consensus 254 ---~~~------------~~~~~~-~-------------------~~~~~~~~~li~~~l~~dp~~Rps~~~l 291 (320)
T 3a99_A 254 ---EII------------RGQVFF-R-------------------QRVSSECQHLIRWCLALRPSDRPTFEEI 291 (320)
T ss_dssp ---HHH------------HCCCCC-S-------------------SCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ---hhh------------cccccc-c-------------------ccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 010 000000 0 0123457799999999999999998764
No 275
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=6.2e-36 Score=335.95 Aligned_cols=198 Identities=24% Similarity=0.359 Sum_probs=168.3
Q ss_pred hcCCCCCcccccccceeEEEEEECCCC-eEEEEEEeeccCchhHHHHHHHHHHHhcCCCCc------ceeeeeecccccc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGR-TTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRN------LVKILTACSGVDY 759 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 759 (986)
.++|++.+.||+|+||+||+|.+..++ +.||+|+++.. ....+.+.+|++++++++|++ ++.++++ +
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~-----~ 91 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDW-----F 91 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEE-----E
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeee-----e
Confidence 478999999999999999999997665 79999999743 234567888999999987665 8888887 4
Q ss_pred CCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEe---
Q 046598 760 QGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILL--- 836 (986)
Q Consensus 760 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll--- 836 (986)
...+..++||||+ ++++.+++... ....+++.+++.++.||+.||+|||+. +|+||||||+||++
T Consensus 92 ~~~~~~~lv~e~~-~~~l~~~l~~~--------~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~ 159 (355)
T 2eu9_A 92 NFHGHMCIAFELL-GKNTFEFLKEN--------NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNS 159 (355)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHHT--------TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCC
T ss_pred eeCCeEEEEEecc-CCChHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecc
Confidence 4557899999999 66777777522 124689999999999999999999999 99999999999999
Q ss_pred ----------------cCCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh
Q 046598 837 ----------------DEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT 900 (986)
Q Consensus 837 ----------------~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt 900 (986)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 234 (355)
T 2eu9_A 160 EFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 234 (355)
T ss_dssp CEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHh
Confidence 56789999999999864322 223568999999999999999999999999999999999
Q ss_pred CCCCCCc
Q 046598 901 RKKPTDI 907 (986)
Q Consensus 901 g~~pf~~ 907 (986)
|+.||..
T Consensus 235 g~~pf~~ 241 (355)
T 2eu9_A 235 GFTLFQT 241 (355)
T ss_dssp SSCSCCC
T ss_pred CCCCCCC
Confidence 9999974
No 276
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=334.60 Aligned_cols=245 Identities=21% Similarity=0.274 Sum_probs=187.3
Q ss_pred HHHHHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc------hhHHHHHHHHHHHhcC----CCCcceee
Q 046598 681 QNLYNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH------GAFKSFIAECNTLKNI----RHRNLVKI 750 (986)
Q Consensus 681 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~l 750 (986)
.+.....++|++.+.||+|+||.||+|++..+++.||||+++.... .....+.+|+.++.++ +||||+++
T Consensus 24 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~ 103 (312)
T 2iwi_A 24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRL 103 (312)
T ss_dssp ---------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCE
T ss_pred cchhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeE
Confidence 3445567889999999999999999999988899999999864322 1223456788888888 89999999
Q ss_pred eeeccccccCCCceEEEEEEe-ccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecC
Q 046598 751 LTACSGVDYQGNDFKALVFEF-MHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDL 829 (986)
Q Consensus 751 ~~~~~~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dl 829 (986)
++++ ...+..++|||| +.+++|.+++.. ...+++.+++.++.||+.||+|||+. +|+||||
T Consensus 104 ~~~~-----~~~~~~~~v~e~~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl 165 (312)
T 2iwi_A 104 LDWF-----ETQEGFMLVLERPLPAQDLFDYITE----------KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDI 165 (312)
T ss_dssp EEEC----------CEEEEECCSSEEEHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCC
T ss_pred EEEE-----ecCCeEEEEEEecCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCC
Confidence 9994 455778999999 789999999952 23589999999999999999999999 9999999
Q ss_pred CCCCeEec-CCCcEEEcccccceecCCCCCccccccccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCc
Q 046598 830 KPSNILLD-EDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEV-SISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 830 kp~NIll~-~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
||+||+++ .++.+||+|||+++...... .....|+..|+|||++.+..+ +.++|||||||++|||++|+.||..
T Consensus 166 kp~Nil~~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 241 (312)
T 2iwi_A 166 KDENILIDLRRGCAKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER 241 (312)
T ss_dssp SGGGEEEETTTTEEEECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred ChhhEEEeCCCCeEEEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCC
Confidence 99999999 88999999999998764322 234568999999999877666 4589999999999999999999863
Q ss_pred cccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 908 MFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.. . ..+..... + ...+.++.+++.+||+.||++|||++||
T Consensus 242 ~~-------~------------~~~~~~~~-~-------------------~~~~~~~~~li~~~l~~~p~~Rps~~e~ 281 (312)
T 2iwi_A 242 DQ-------E------------ILEAELHF-P-------------------AHVSPDCCALIRRCLAPKPSSRPSLEEI 281 (312)
T ss_dssp HH-------H------------HHHTCCCC-C-------------------TTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred hH-------H------------HhhhccCC-c-------------------ccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 11 0 11100000 0 0123457789999999999999998764
No 277
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2e-35 Score=324.49 Aligned_cols=256 Identities=30% Similarity=0.487 Sum_probs=240.6
Q ss_pred ccceEEEccCCcccc--cCCccccCCCCCCEEEccC-ccccCcCCCcccCCCCCCEEEccCccceeecCcccccc-cccE
Q 046598 357 TTLEVLLLDNNQIFG--NIPAAIGKFVNLQRLDMCS-NRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNL-KLFI 432 (986)
Q Consensus 357 ~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~L~~ 432 (986)
..++.|+|++|++++ .+|..|.++++|++|++++ |.+.+.+|..|..+++|++|+|++|++++.+|..+..+ +|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 468999999999998 8999999999999999995 99999999999999999999999999999999988766 5999
Q ss_pred EEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCC-cceEEEccCCcccccCCcccccccccchhhccCc
Q 046598 433 LYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSS-SLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGN 511 (986)
Q Consensus 433 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 511 (986)
|+|++|.+++.+|..|..+++|++|++++|++++.+|.. ++.++ +|+.|++++|++++.+|..+..++ |+.|+|++|
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N 207 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDS-YGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN 207 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGG-GGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSS
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHH-HhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCC
Confidence 999999999999999999999999999999999899988 44555 999999999999999999999997 999999999
Q ss_pred cccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCC
Q 046598 512 KLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPT 591 (986)
Q Consensus 512 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 591 (986)
++++.+|..|..+++|++|+|++|++++.+|. +..+++|++|+|++|+|++.+|..+..+++|++|+|++|+++|.+|.
T Consensus 208 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~ 286 (313)
T 1ogq_A 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC
T ss_pred cccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCC
Confidence 99999999999999999999999999977665 88999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeeeCCcccccCCCC
Q 046598 592 QGVFKNASITSVFGNLKLCGGIPE 615 (986)
Q Consensus 592 ~~~~~~~~~~~~~~n~~lcg~~~~ 615 (986)
.+.+++++.+++.||+++||.|..
T Consensus 287 ~~~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 287 GGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp STTGGGSCGGGTCSSSEEESTTSS
T ss_pred CccccccChHHhcCCCCccCCCCC
Confidence 988999999999999999997653
No 278
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=3.1e-36 Score=340.90 Aligned_cols=204 Identities=24% Similarity=0.332 Sum_probs=170.4
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCC-----------CCcceeeeeecc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIR-----------HRNLVKILTACS 755 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~ 755 (986)
.++|++.+.||+|+||+||+|++..+++.||||+++.. ....+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 46899999999999999999999988999999998743 234567889999998886 899999999864
Q ss_pred ccccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeE
Q 046598 756 GVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNIL 835 (986)
Q Consensus 756 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 835 (986)
.. .......++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+++ +|+||||||+||+
T Consensus 97 ~~-~~~~~~~~lv~e~~-~~~L~~~~~~~~--------~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIl 164 (373)
T 1q8y_A 97 HK-GPNGVHVVMVFEVL-GENLLALIKKYE--------HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVL 164 (373)
T ss_dssp EE-ETTEEEEEEEECCC-CEEHHHHHHHTT--------TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEE
T ss_pred cc-CCCCceEEEEEecC-CCCHHHHHHHhh--------ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeE
Confidence 32 12334789999999 999999996322 235899999999999999999999942 8999999999999
Q ss_pred ec------CCCcEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCcc
Q 046598 836 LD------EDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIM 908 (986)
Q Consensus 836 l~------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~ 908 (986)
++ ..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 165 l~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 238 (373)
T 1q8y_A 165 MEIVDSPENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238 (373)
T ss_dssp EEEEETTTTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred EeccCCCcCcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 94 4458999999999876422 22346899999999999999999999999999999999999999743
No 279
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.4e-36 Score=334.98 Aligned_cols=257 Identities=23% Similarity=0.252 Sum_probs=174.7
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC-chhHHHHHHHHH-HHhcCCCCcceeeeeeccccccCCCce
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH-HGAFKSFIAECN-TLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.++|++.+.||+|+||.||+|.+..+++.||||+++... .....++..|+. +++.++||||+++++++ ..++.
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~-----~~~~~ 95 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGAL-----FREGD 95 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEE-----ECSSE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEE-----EeCCc
Confidence 468999999999999999999999889999999997543 233445666666 77788999999999994 44578
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHI 844 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 844 (986)
.++||||+++ +|.+++..... .....+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||
T Consensus 96 ~~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl 167 (327)
T 3aln_A 96 CWICMELMST-SFDKFYKYVYS-----VLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKL 167 (327)
T ss_dssp EEEEECCCSE-EHHHHHHHHHH-----TTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEE
T ss_pred eEEEEeecCC-ChHHHHHHHHh-----hhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEE
Confidence 9999999975 88887742110 1235689999999999999999999984 28999999999999999999999
Q ss_pred cccccceecCCCCCccccccccccccccccccc----cCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHH
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYG----LGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~ 920 (986)
+|||+++...... ......|++.|+|||++ .+..++.++|||||||++|+|++|+.||........ ...
T Consensus 168 ~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~ 240 (327)
T 3aln_A 168 CDFGISGQLVDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD----QLT 240 (327)
T ss_dssp CCCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------C
T ss_pred ccCCCceeccccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH----HHH
Confidence 9999997654322 12234689999999998 456789999999999999999999999964221100 000
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
......+..... ......+.++.+++.+||+.||++|||++||
T Consensus 241 ------------~~~~~~~~~~~~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 283 (327)
T 3aln_A 241 ------------QVVKGDPPQLSN-----------SEEREFSPSFINFVNLCLTKDESKRPKYKEL 283 (327)
T ss_dssp ------------CCCCSCCCCCCC-----------CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ------------HHhcCCCCCCCC-----------cccccCCHHHHHHHHHHhhCChhhCcCHHHH
Confidence 000000000000 0000123457899999999999999998764
No 280
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.7e-36 Score=361.68 Aligned_cols=250 Identities=23% Similarity=0.364 Sum_probs=194.2
Q ss_pred hhcCCCCCcccccccceeEEEEEECCC---CeEEEEEEeeccC-chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCC
Q 046598 686 ATDRFSSVNQIGEGSFGSVFKGILDDG---RTTIAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 761 (986)
Q Consensus 686 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 761 (986)
..++|++.+.||+|+||.||+|.+..+ +..||||+++... ....+.+.+|+.++++++||||+++++++.
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~------ 461 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------ 461 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC------
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe------
Confidence 457899999999999999999998643 5679999986533 334577999999999999999999999852
Q ss_pred CceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCc
Q 046598 762 NDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMI 841 (986)
Q Consensus 762 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 841 (986)
++..++||||+++|+|.++++. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 462 ~~~~~lv~E~~~~g~L~~~l~~---------~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~ 529 (656)
T 2j0j_A 462 ENPVWIIMELCTLGELRSFLQV---------RKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDC 529 (656)
T ss_dssp SSSCEEEEECCTTCBHHHHHHH---------TTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTE
T ss_pred cCceEEEEEcCCCCcHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCC
Confidence 2458999999999999999962 234589999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccHHHHHH
Q 046598 842 AHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 842 ~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~ 920 (986)
+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||......+ ......
T Consensus 530 vkL~DFG~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~~~i~ 606 (656)
T 2j0j_A 530 VKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIE 606 (656)
T ss_dssp EEECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHH
T ss_pred EEEEecCCCeecCCCcc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHH
Confidence 99999999987643322 22233457789999999998899999999999999999997 999986432111 000000
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
....... +..++.++.+++.+||+.||++|||+.||
T Consensus 607 -----------~~~~~~~-------------------~~~~~~~l~~li~~~l~~dP~~RPs~~el 642 (656)
T 2j0j_A 607 -----------NGERLPM-------------------PPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642 (656)
T ss_dssp -----------HTCCCCC-------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -----------cCCCCCC-------------------CccccHHHHHHHHHHcCCChhHCcCHHHH
Confidence 0000000 01234567899999999999999998764
No 281
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4.9e-36 Score=331.20 Aligned_cols=250 Identities=22% Similarity=0.251 Sum_probs=175.8
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCch-h-HHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHG-A-FKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.++|++.+.||+|+||.||+|.+..+++.||||++...... . .+.+.++..+++.++||||+++++++ ..++.
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~-----~~~~~ 98 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTF-----ITNTD 98 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSSE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEE-----ecCCc
Confidence 56799999999999999999999988999999999754322 2 23344555678888999999999994 45578
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHh-cCCCCeEeecCCCCCeEecCCCcEE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHH-DCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
.++||||+ ++.+..+.. .....+++..++.++.|++.||+|||+ . +|+||||||+||+++.++.+|
T Consensus 99 ~~lv~e~~-~~~~~~l~~---------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~k 165 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKK---------RMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIK 165 (318)
T ss_dssp EEEEECCC-SEEHHHHHH---------HHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEE
T ss_pred EEEEEecc-CCcHHHHHH---------HhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEE
Confidence 99999999 556665553 123468999999999999999999998 6 899999999999999999999
Q ss_pred EcccccceecCCCCCcccccccccccccccccccc-----CCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHH
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGL-----GSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNL 918 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~ 918 (986)
|+|||+++...... ......+++.|+|||++. +..++.++|||||||++|||++|+.||.............
T Consensus 166 l~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 242 (318)
T 2dyl_A 166 LCDFGISGRLVDDK---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV 242 (318)
T ss_dssp ECCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHH
T ss_pred EEECCCchhccCCc---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHH
Confidence 99999997654322 223356899999999984 4578899999999999999999999996322111111111
Q ss_pred HHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 919 ARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 919 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.... +. ..+. ....+.++.+++.+||+.||++|||++||
T Consensus 243 ~~~~-~~-----------~~~~-----------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l 281 (318)
T 2dyl_A 243 LQEE-PP-----------LLPG-----------------HMGFSGDFQSFVKDCLTKDHRKRPKYNKL 281 (318)
T ss_dssp HHSC-CC-----------CCCS-----------------SSCCCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred hccC-CC-----------CCCc-----------------cCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 1100 00 0000 00123457799999999999999998764
No 282
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.4e-36 Score=332.65 Aligned_cols=250 Identities=23% Similarity=0.326 Sum_probs=188.4
Q ss_pred HhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC--chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCC
Q 046598 685 NATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 762 (986)
Q Consensus 685 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 762 (986)
...++|++.+.||+|+||.||+|.+.. .||+|+++... ....+.+.+|+.++++++||||+++++++ ...
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~ 101 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC-----MSP 101 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEE-----ECS
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEE-----ecC
Confidence 346789999999999999999999865 48999986432 23345678899999999999999999995 445
Q ss_pred ceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcE
Q 046598 763 DFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIA 842 (986)
Q Consensus 763 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 842 (986)
...++||||+++++|.+++.. ....+++.+++.++.||+.||+|||+. +|+||||||+||+++ ++.+
T Consensus 102 ~~~~iv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~ 168 (319)
T 2y4i_B 102 PHLAIITSLCKGRTLYSVVRD---------AKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKV 168 (319)
T ss_dssp SCEEEECBCCCSEEHHHHTTS---------SCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CC
T ss_pred CceEEEeecccCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCE
Confidence 679999999999999999962 234688999999999999999999999 999999999999998 6799
Q ss_pred EEcccccceecCCCC---CccccccccccccccccccccC---------CCcCcccchhhHHHHHHHHHhCCCCCCcccc
Q 046598 843 HIGDFGLARFLPLSS---AQTSSIGAKGSIGYIAPEYGLG---------SEVSISGDVYSYGILLLELITRKKPTDIMFE 910 (986)
Q Consensus 843 kL~DFG~a~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDvwSlGvvl~elltg~~pf~~~~~ 910 (986)
||+|||+++...... .........|++.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 169 ~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~ 248 (319)
T 2y4i_B 169 VITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA 248 (319)
T ss_dssp EECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH
T ss_pred EEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 999999987543211 1122233458999999999864 4578999999999999999999999963221
Q ss_pred ccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 911 GDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.. ........... .... ...+.++.+++.+||+.||++|||++||
T Consensus 249 ~~--~~~~~~~~~~~--------~~~~---------------------~~~~~~l~~li~~~l~~~p~~Rpt~~~l 293 (319)
T 2y4i_B 249 EA--IIWQMGTGMKP--------NLSQ---------------------IGMGKEISDILLFCWAFEQEERPTFTKL 293 (319)
T ss_dssp HH--HHHHHHTTCCC--------CCCC---------------------SSCCTTHHHHHHHHHCSSTTTSCCHHHH
T ss_pred HH--HHHHhccCCCC--------CCCc---------------------CCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 10 00000000000 0000 0122346789999999999999998764
No 283
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.3e-35 Score=337.88 Aligned_cols=255 Identities=21% Similarity=0.256 Sum_probs=180.3
Q ss_pred cCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcC-CCCcceeeeeeccccccCCCceEE
Q 046598 688 DRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 688 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
+.|.+.+.||+|+||+||.+... +++.||||++... ..+.+.+|+++++++ +||||++++++ +..+...+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~-~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~-----~~~~~~~~ 85 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCS-----ETTDRFLY 85 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEES-SSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEE-----EECSSEEE
T ss_pred heeeccCeEeeCCCeEEEEEEEE-CCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEE-----EecCCeEE
Confidence 34556788999999999876544 4899999998653 235678899999876 89999999998 45668899
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCC-------
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDED------- 839 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~------- 839 (986)
+||||++ |+|.+++....... ......++.+++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 86 lv~E~~~-gsL~~~l~~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~ 158 (434)
T 2rio_A 86 IALELCN-LNLQDLVESKNVSD---ENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQ 158 (434)
T ss_dssp EEECCCS-EEHHHHHHTC---------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCC
T ss_pred EEEecCC-CCHHHHHhccCCCc---hhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCccccccc
Confidence 9999995 69999997433211 1111123445678999999999999999 99999999999999754
Q ss_pred ------CcEEEcccccceecCCCCCc--cccccccccccccccccccC-------CCcCcccchhhHHHHHHHHHh-CCC
Q 046598 840 ------MIAHIGDFGLARFLPLSSAQ--TSSIGAKGSIGYIAPEYGLG-------SEVSISGDVYSYGILLLELIT-RKK 903 (986)
Q Consensus 840 ------~~~kL~DFG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlGvvl~ellt-g~~ 903 (986)
+.+||+|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|||+| |+.
T Consensus 159 ~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~ 238 (434)
T 2rio_A 159 QTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238 (434)
T ss_dssp TTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCC
T ss_pred ccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCC
Confidence 48999999999876543221 12234579999999999876 678999999999999999999 999
Q ss_pred CCCccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCC
Q 046598 904 PTDIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSM 983 (986)
Q Consensus 904 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 983 (986)
||....... ....... ....... .......+.++.+++.+||+.||++|||+
T Consensus 239 Pf~~~~~~~---~~i~~~~------------~~~~~~~-------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~ 290 (434)
T 2rio_A 239 PFGDKYSRE---SNIIRGI------------FSLDEMK-------------CLHDRSLIAEATDLISQMIDHDPLKRPTA 290 (434)
T ss_dssp TTCSTTTHH---HHHHHTC------------CCCCCCT-------------TCCCHHHHHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCCCchhhH---HHHhcCC------------CCccccc-------------ccccccchHHHHHHHHHHhhCChhhCCCH
Confidence 986322111 1111110 0000000 00012345678899999999999999998
Q ss_pred CCC
Q 046598 984 TNV 986 (986)
Q Consensus 984 ~eV 986 (986)
+||
T Consensus 291 ~ei 293 (434)
T 2rio_A 291 MKV 293 (434)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 284
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.5e-35 Score=335.52 Aligned_cols=248 Identities=21% Similarity=0.272 Sum_probs=177.7
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcC-CCCcceeeeeeccccccCCCceE
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 765 (986)
..+|.+.+.||+|+||+||.... .+++.||||++..... ..+.+|+++++++ +||||++++++ +.++...
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~-----~~~~~~~ 93 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCT-----EKDRQFQ 93 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEE-----EEETTEE
T ss_pred cEEEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEE-----EecCCEE
Confidence 34688899999999999764333 3478999999865332 3356899999999 89999999998 4456789
Q ss_pred EEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecC-----CC
Q 046598 766 ALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDE-----DM 840 (986)
Q Consensus 766 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-----~~ 840 (986)
|+||||++ |+|.+++.... ...+..++..++.||+.||+|||+. +|+||||||+||+++. ..
T Consensus 94 ~lv~E~~~-g~L~~~l~~~~---------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~ 160 (432)
T 3p23_A 94 YIAIELCA-ATLQEYVEQKD---------FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKI 160 (432)
T ss_dssp EEEEECCS-EEHHHHHHSSS---------CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBC
T ss_pred EEEEECCC-CCHHHHHHhcC---------CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCce
Confidence 99999995 69999996332 2234445678999999999999999 9999999999999953 23
Q ss_pred cEEEcccccceecCCCCC-cccccccccccccccccccc---CCCcCcccchhhHHHHHHHHHh-CCCCCCccccccccH
Q 046598 841 IAHIGDFGLARFLPLSSA-QTSSIGAKGSIGYIAPEYGL---GSEVSISGDVYSYGILLLELIT-RKKPTDIMFEGDMNL 915 (986)
Q Consensus 841 ~~kL~DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvvl~ellt-g~~pf~~~~~~~~~~ 915 (986)
.+||+|||+|+....... ........||+.|+|||++. ...++.++|||||||++|||++ |..||...... .
T Consensus 161 ~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~---~ 237 (432)
T 3p23_A 161 KAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR---Q 237 (432)
T ss_dssp CEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---H
T ss_pred eEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---H
Confidence 688999999987643321 12334467999999999987 4567889999999999999999 99998532111 0
Q ss_pred HHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 916 HNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 916 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.... .... ..... .........+.+++.+||+.||++|||++||
T Consensus 238 ~~~~---~~~~---------~~~~~---------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ev 281 (432)
T 3p23_A 238 ANIL---LGAC---------SLDCL---------------HPEKHEDVIARELIEKMIAMDPQKRPSAKHV 281 (432)
T ss_dssp HHHH---TTCC---------CCTTS---------------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHH---hccC---------Ccccc---------------CccccccHHHHHHHHHHHhCCHhhCCCHHHH
Confidence 0000 0000 00000 0001233446789999999999999998764
No 285
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=7.1e-34 Score=323.20 Aligned_cols=200 Identities=21% Similarity=0.216 Sum_probs=162.5
Q ss_pred cCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccccccEEEecccccCCCCCcccCCC
Q 046598 372 NIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSYNFLQGSIPSSLGRY 451 (986)
Q Consensus 372 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l 451 (986)
..+..|..+++|++|++++|.+++. .+..+++|+.|++++|.+++. ...
T Consensus 156 ~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~----------------------------~~~ 204 (390)
T 3o6n_A 156 IEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL----------------------------AIP 204 (390)
T ss_dssp CCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE----------------------------ECC
T ss_pred cChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc----------------------------CCC
Confidence 3344555666777777777777643 255566777777777766521 122
Q ss_pred CCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccccEEe
Q 046598 452 ETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLE 531 (986)
Q Consensus 452 ~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 531 (986)
++|+.|++++|+++ .+|.. ..++|+.|++++|++++. ..+..+++|++|+|++|++++..|..|..+++|++|+
T Consensus 205 ~~L~~L~l~~n~l~-~~~~~---~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 278 (390)
T 3o6n_A 205 IAVEELDASHNSIN-VVRGP---VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLY 278 (390)
T ss_dssp SSCSEEECCSSCCC-EEECC---CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEE
T ss_pred CcceEEECCCCeee-ecccc---ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEE
Confidence 47888999999987 55554 347899999999999953 5789999999999999999988899999999999999
Q ss_pred cccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCCccccccccceeeeCCccccc
Q 046598 532 MQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPTQGVFKNASITSVFGNLKLCG 611 (986)
Q Consensus 532 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lcg 611 (986)
|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|+++... ...++.++.+++.+|++-|.
T Consensus 279 L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 279 ISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp CCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC--chhhccCCEEEcCCCCccch
Confidence 99999995 6777889999999999999999 57888999999999999999999875 34588899999999999886
Q ss_pred C
Q 046598 612 G 612 (986)
Q Consensus 612 ~ 612 (986)
+
T Consensus 355 ~ 355 (390)
T 3o6n_A 355 S 355 (390)
T ss_dssp H
T ss_pred h
Confidence 4
No 286
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.1e-35 Score=354.06 Aligned_cols=236 Identities=20% Similarity=0.294 Sum_probs=187.5
Q ss_pred hcCCCCCcccccccceeEEEEEECC-CCeEEEEEEeecc-CchhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCce
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDD-GRTTIAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.++|++.+.||+|+||.||+|.+.. +++.||||++... .....+.+.+|++++++++||||++++++|..........
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 4789999999999999999999975 6899999998643 2344567899999999999999999999975432222233
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHI 844 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 844 (986)
.|+||||+++++|.+++. ..+++.+++.|+.||+.||.|||++ ||+||||||+||+++.+ .+||
T Consensus 159 ~~lv~E~~~g~~L~~~~~------------~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl 222 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKG------------QKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKL 222 (681)
T ss_dssp EEEEEECCCCEECC----------------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEE
T ss_pred eEEEEEeCCCCcHHHHHh------------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEE
Confidence 799999999999998774 2589999999999999999999999 99999999999999985 8999
Q ss_pred cccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhCC
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTALP 924 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 924 (986)
+|||+++..... ....||+.|+|||++.+.. +.++|||||||++|+|++|.+||........ +
T Consensus 223 ~DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----------~ 285 (681)
T 2pzi_A 223 IDLGAVSRINSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------P 285 (681)
T ss_dssp CCCTTCEETTCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------C
T ss_pred EecccchhcccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc----------c
Confidence 999999876432 3356999999999987654 8999999999999999999988763211100 0
Q ss_pred CchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCC
Q 046598 925 DHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMT 984 (986)
Q Consensus 925 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 984 (986)
.. .........+.+++.+||+.||++||+..
T Consensus 286 ~~-----------------------------~~~~~~~~~l~~li~~~l~~dP~~R~~~~ 316 (681)
T 2pzi_A 286 ED-----------------------------DPVLKTYDSYGRLLRRAIDPDPRQRFTTA 316 (681)
T ss_dssp TT-----------------------------CHHHHHCHHHHHHHHHHTCSSGGGSCSSH
T ss_pred cc-----------------------------ccccccCHHHHHHHhhhccCChhhCCCHH
Confidence 00 00112334577899999999999999764
No 287
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.9e-35 Score=334.12 Aligned_cols=249 Identities=15% Similarity=0.127 Sum_probs=181.9
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc---hhHHHHHHHHHHHhcCCC-Ccceeeeee---------
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH---GAFKSFIAECNTLKNIRH-RNLVKILTA--------- 753 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~niv~l~~~--------- 753 (986)
+..|...+.||+|+||+||+|++..+++.||||+++.... ...+.+.+|+.+++.++| ++......+
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3457788999999999999999998899999999873222 235789999999999977 322111111
Q ss_pred c------------cccccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCC
Q 046598 754 C------------SGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQ 821 (986)
Q Consensus 754 ~------------~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ 821 (986)
+ ...........+++|+++ +++|.++++..... ......+++..++.|+.||++||+|||++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~---~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-- 230 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSH---SSTHKSLVHHARLQLTLQVIRLLASLHHY-- 230 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHH---TTTSHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcc---cccCCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 0 000000123467788866 78999998422110 12245688999999999999999999999
Q ss_pred CCeEeecCCCCCeEecCCCcEEEcccccceecCCCCCccccccccccccccccccc----------cCCCcCcccchhhH
Q 046598 822 PPIAHCDLKPSNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYG----------LGSEVSISGDVYSY 891 (986)
Q Consensus 822 ~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDvwSl 891 (986)
+|+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||
T Consensus 231 -~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSl 303 (413)
T 3dzo_A 231 -GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTL 303 (413)
T ss_dssp -TEECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHH
T ss_pred -CcccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHH
Confidence 9999999999999999999999999999864321 334567 999999998 66678999999999
Q ss_pred HHHHHHHHhCCCCCCccccccccHHHHHHhhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhc
Q 046598 892 GILLLELITRKKPTDIMFEGDMNLHNLARTALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVA 971 (986)
Q Consensus 892 Gvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 971 (986)
||++|||++|+.||........ .+..+.... ..+.++.+++.+
T Consensus 304 Gvil~elltg~~Pf~~~~~~~~-----------------~~~~~~~~~--------------------~~~~~~~~li~~ 346 (413)
T 3dzo_A 304 GLAIYWIWCADLPNTDDAALGG-----------------SEWIFRSCK--------------------NIPQPVRALLEG 346 (413)
T ss_dssp HHHHHHHHHSSCCCCTTGGGSC-----------------SGGGGSSCC--------------------CCCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCcchhhh-----------------HHHHHhhcc--------------------cCCHHHHHHHHH
Confidence 9999999999999964321110 000000000 123457899999
Q ss_pred ccCCCCCCCCCCCC
Q 046598 972 CSMESPEDRMSMTN 985 (986)
Q Consensus 972 Cl~~dP~~RPt~~e 985 (986)
||+.||++|||+.|
T Consensus 347 ~l~~dP~~Rpt~~~ 360 (413)
T 3dzo_A 347 FLRYPKEDRLLPLQ 360 (413)
T ss_dssp HTCSSGGGSCCHHH
T ss_pred HccCChhhCcCHHH
Confidence 99999999999765
No 288
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=5.5e-33 Score=310.74 Aligned_cols=174 Identities=25% Similarity=0.396 Sum_probs=116.2
Q ss_pred ccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccccccEEEecccccCCCCCcccCCCCCCCe
Q 046598 377 IGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSYNFLQGSIPSSLGRYETLTT 456 (986)
Q Consensus 377 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 456 (986)
+..+++|++|++++|.+++..+ +..+++|+.|++++|.+.+..+ +..+++|++
T Consensus 173 ~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-------------------------~~~~~~L~~ 225 (347)
T 4fmz_A 173 IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP-------------------------VANMTRLNS 225 (347)
T ss_dssp GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-------------------------GGGCTTCCE
T ss_pred hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch-------------------------hhcCCcCCE
Confidence 5667788888888888874433 7777777777777777663322 445566666
Q ss_pred eecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccccEEeccccc
Q 046598 457 IDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENF 536 (986)
Q Consensus 457 L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 536 (986)
|++++|+++ .++. +..+++|++|++++|++++ + ..+..+++|++|++++|++++. ..+..+++|++|++++|+
T Consensus 226 L~l~~n~l~-~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~ 298 (347)
T 4fmz_A 226 LKIGNNKIT-DLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQ 298 (347)
T ss_dssp EECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSC
T ss_pred EEccCCccC-CCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCc
Confidence 666666665 3333 4556666666666666664 2 3466666777777777777643 346677777777777777
Q ss_pred ccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccc
Q 046598 537 LQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLE 586 (986)
Q Consensus 537 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 586 (986)
+++..|..+..+++|+.|+|++|++++..| +..+++|++|++++|+++
T Consensus 299 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 299 LGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 776667777777777777777777776555 667777777777777765
No 289
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-33 Score=338.26 Aligned_cols=200 Identities=21% Similarity=0.209 Sum_probs=162.6
Q ss_pred cCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccccccEEEecccccCCCCCcccCCC
Q 046598 372 NIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSYNFLQGSIPSSLGRY 451 (986)
Q Consensus 372 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l 451 (986)
..|..|..+++|++|+|++|.+++. .+..+++|+.|++++|.+++. ...
T Consensus 162 ~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~l----------------------------~~~ 210 (597)
T 3oja_B 162 IEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL----------------------------AIP 210 (597)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSEE----------------------------ECC
T ss_pred CChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCccccc----------------------------cCC
Confidence 3444555666677777777777643 245566677777776666531 123
Q ss_pred CCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccccEEe
Q 046598 452 ETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLE 531 (986)
Q Consensus 452 ~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 531 (986)
++|+.|++++|.++ .+|... .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|..|+.+++|+.|+
T Consensus 211 ~~L~~L~ls~n~l~-~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 284 (597)
T 3oja_B 211 IAVEELDASHNSIN-VVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLY 284 (597)
T ss_dssp TTCSEEECCSSCCC-EEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEE
T ss_pred chhheeeccCCccc-cccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEE
Confidence 46888899999887 555442 3689999999999996 47899999999999999999999999999999999999
Q ss_pred cccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCCccccccccceeeeCCccccc
Q 046598 532 MQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPTQGVFKNASITSVFGNLKLCG 611 (986)
Q Consensus 532 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lcg 611 (986)
|++|.+++ +|..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|++++.++ ..++.+..+.+.+|++-|.
T Consensus 285 Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 285 ISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKL--STHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCC--CTTCCCSEEECCSSCEEHH
T ss_pred CCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcCh--hhcCCCCEEEeeCCCCCCh
Confidence 99999996 6778888999999999999999 688889999999999999999998753 4578899999999999886
Q ss_pred C
Q 046598 612 G 612 (986)
Q Consensus 612 ~ 612 (986)
+
T Consensus 361 ~ 361 (597)
T 3oja_B 361 S 361 (597)
T ss_dssp H
T ss_pred h
Confidence 4
No 290
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=4.3e-34 Score=312.38 Aligned_cols=235 Identities=19% Similarity=0.268 Sum_probs=178.7
Q ss_pred hhcCCCCC-cccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHH-hcCCCCcceeeeeeccccccCCCc
Q 046598 686 ATDRFSSV-NQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTL-KNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 686 ~~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
..++|.+. +.||+|+||.||+|.+..+++.||+|+++.. ..+.+|+.++ +..+||||+++++++... ...+.
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~ 88 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENL-YAGRK 88 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEE
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhh-cCCCc
Confidence 34678777 7799999999999999988999999998642 4567888887 556999999999986432 33467
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecC---CC
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDE---DM 840 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~ 840 (986)
..++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++. ++
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 157 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQDRG--------DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNA 157 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHHCT--------TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTC
T ss_pred eEEEEEeecCCCcHHHHHHhcc--------CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCC
Confidence 7999999999999999996322 23689999999999999999999999 9999999999999998 78
Q ss_pred cEEEcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHH
Q 046598 841 IAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLAR 920 (986)
Q Consensus 841 ~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~ 920 (986)
.+||+|||++.... +..++.++||||+||++|||++|+.||......... .
T Consensus 158 ~~kl~Dfg~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-----~ 208 (299)
T 3m2w_A 158 ILKLTDFGFAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-----P 208 (299)
T ss_dssp CEEECCCTTCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------C
T ss_pred cEEEeccccccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-----H
Confidence 99999999997532 245788999999999999999999999632211000 0
Q ss_pred hhCCCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 921 TALPDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 921 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
...... ..... .. ........+.++.+++.+||+.||++|||++|+
T Consensus 209 -~~~~~~-------~~~~~---------~~---~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~ 254 (299)
T 3m2w_A 209 -GMKTRI-------RMGQY---------EF---PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 254 (299)
T ss_dssp -CSCCSS-------CTTCC---------SS---CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred -HHHHHH-------hhccc---------cC---CchhcccCCHHHHHHHHHHcccChhhCCCHHHH
Confidence 000000 00000 00 000112345568899999999999999998764
No 291
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=7.6e-33 Score=309.59 Aligned_cols=108 Identities=24% Similarity=0.356 Sum_probs=66.9
Q ss_pred cCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccc
Q 046598 448 LGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKL 527 (986)
Q Consensus 448 ~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 527 (986)
+..+++|++|++++|+++ .++ . +..+++|+.|++++|++++. ..+..+++|+.|++++|++++..|..++.+++|
T Consensus 239 ~~~l~~L~~L~l~~n~l~-~~~-~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 313 (347)
T 4fmz_A 239 LANLSQLTWLEIGTNQIS-DIN-A-VKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNL 313 (347)
T ss_dssp GTTCTTCCEEECCSSCCC-CCG-G-GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTC
T ss_pred hhcCCCCCEEECCCCccC-CCh-h-HhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccC
Confidence 344455555555555555 232 1 44555666666666666642 346666677777777777776666677777777
Q ss_pred cEEecccccccccCCccccCCCCCCEEeCCCccCc
Q 046598 528 EQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLS 562 (986)
Q Consensus 528 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 562 (986)
++|+|++|++++..| +..+++|+.|++++|+|+
T Consensus 314 ~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 314 TTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp SEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 777777777776544 667777777777777765
No 292
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.7e-34 Score=310.90 Aligned_cols=224 Identities=12% Similarity=0.081 Sum_probs=173.6
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC---chhHHHHHHHHHHHhcCCCCcceeeeeeccccccCCCc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 763 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 763 (986)
.++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+.++++++||||+++++++ ..++
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~~~ 104 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVV-----HTRA 104 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EETT
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEE-----EECC
Confidence 468999999999999999999999889999999997543 23347889999999999999999999994 4457
Q ss_pred eEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEE
Q 046598 764 FKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAH 843 (986)
Q Consensus 764 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 843 (986)
..|+||||++|++|.++++. .....++.+|+.|++.||+|||++ ||+||||||+||+++.++.+|
T Consensus 105 ~~~lv~e~~~g~~L~~~l~~------------~~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~k 169 (286)
T 3uqc_A 105 GGLVVAEWIRGGSLQEVADT------------SPSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVV 169 (286)
T ss_dssp EEEEEEECCCEEEHHHHHTT------------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEE
T ss_pred cEEEEEEecCCCCHHHHHhc------------CCChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEE
Confidence 89999999999999999941 134557889999999999999999 999999999999999999999
Q ss_pred EcccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCccccccccHHHHHHhhC
Q 046598 844 IGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMNLHNLARTAL 923 (986)
Q Consensus 844 L~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 923 (986)
|+++| |++ +++.++|||||||++|||+||+.||......... ... ....
T Consensus 170 l~~~~----------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~-~~~-~~~~ 218 (286)
T 3uqc_A 170 LAYPA----------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL-APA-ERDT 218 (286)
T ss_dssp ECSCC----------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS-EEC-CBCT
T ss_pred EEecc----------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh-HHH-HHHh
Confidence 97543 333 3688999999999999999999999743221100 000 0000
Q ss_pred CCchhHHhhhhcccCCcchhhccchhhhhHhhHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 046598 924 PDHVMDIVDSTLLNDGEDLIVHGNQRQRQARVKSRIECLISMVRIGVACSMESPEDRMSMTNV 986 (986)
Q Consensus 924 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 986 (986)
.. .+.. ........+.++.+++.+||+.||++| |++|+
T Consensus 219 ~~------------~~~~------------~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el 256 (286)
T 3uqc_A 219 AG------------QPIE------------PADIDRDIPFQISAVAARSVQGDGGIR-SASTL 256 (286)
T ss_dssp TS------------CBCC------------HHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHH
T ss_pred cc------------CCCC------------hhhcccCCCHHHHHHHHHHcccCCccC-CHHHH
Confidence 00 0000 000011234567899999999999999 88653
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.5e-32 Score=303.07 Aligned_cols=197 Identities=22% Similarity=0.235 Sum_probs=102.9
Q ss_pred ceEEEccCCcccccCCccccCCCCCCEEEccCcccc--CcCCCcccCCCCCCEEEccCccceeecCcccccccccEEEec
Q 046598 359 LEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLS--GTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLS 436 (986)
Q Consensus 359 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~ 436 (986)
|++|++++|++++..+..|..+++|++|++++|.++ +..+..|..+ +|+.|++++|++++ +|..+. .+|++|+++
T Consensus 125 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~-~~L~~L~l~ 201 (332)
T 2ft3_A 125 LVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP-ETLNELHLD 201 (332)
T ss_dssp CCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC-SSCSCCBCC
T ss_pred CCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc-CCCCEEECC
Confidence 334444444444444445666666777777777664 3555566665 66666666666653 222111 234444444
Q ss_pred ccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCcccccc
Q 046598 437 YNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGE 516 (986)
Q Consensus 437 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 516 (986)
+|.+++..+..|..+++|++|+|++|+++ +..+..+..+++|+.|+|++|+++ .
T Consensus 202 ~n~i~~~~~~~l~~l~~L~~L~L~~N~l~-------------------------~~~~~~~~~l~~L~~L~L~~N~l~-~ 255 (332)
T 2ft3_A 202 HNKIQAIELEDLLRYSKLYRLGLGHNQIR-------------------------MIENGSLSFLPTLRELHLDNNKLS-R 255 (332)
T ss_dssp SSCCCCCCTTSSTTCTTCSCCBCCSSCCC-------------------------CCCTTGGGGCTTCCEEECCSSCCC-B
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCC-------------------------cCChhHhhCCCCCCEEECCCCcCe-e
Confidence 44444444444445555555555555554 433334444444555555555544 4
Q ss_pred CcccccCCccccEEecccccccccCCccccC------CCCCCEEeCCCccCc--ccCchhhhcccccceeeccCCc
Q 046598 517 IPSTLGSCIKLEQLEMQENFLQGPIPSSLSS------LRGLSVLDLSQNNLS--GKIPELLIRLQLVKNLNLSNND 584 (986)
Q Consensus 517 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~l~ls~N~ 584 (986)
+|..+..+++|++|++++|+|++..+..|.. ..+|+.|++++|+++ +..|..|..+++|+.+++++|.
T Consensus 256 lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 256 VPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 4444555555555555555555444444433 245677777777766 5566667777777777777763
No 294
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.1e-34 Score=318.16 Aligned_cols=196 Identities=20% Similarity=0.226 Sum_probs=159.6
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccC--------chhHHHHHHHHHHHhcCC---------CCccee
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLH--------HGAFKSFIAECNTLKNIR---------HRNLVK 749 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~ 749 (986)
.++|++.+.||+|+||+||+|++ +++.||||+++... ....+.+.+|+++++.++ ||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 46799999999999999999998 46999999997542 223477889999988886 555555
Q ss_pred eee-----------------ecccc--------ccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHH
Q 046598 750 ILT-----------------ACSGV--------DYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLN 804 (986)
Q Consensus 750 l~~-----------------~~~~~--------~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~ 804 (986)
+.+ ++... ++.++...|+||||+++|++.+.+.. ..+++.+++.
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----------~~~~~~~~~~ 165 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----------KLSSLATAKS 165 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----------TCCCHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----------cCCCHHHHHH
Confidence 544 43210 01136789999999999977766631 3579999999
Q ss_pred HHHHHHHHHHHHH-hcCCCCeEeecCCCCCeEecCCC--------------------cEEEcccccceecCCCCCccccc
Q 046598 805 ISIDVACALNYLH-HDCQPPIAHCDLKPSNILLDEDM--------------------IAHIGDFGLARFLPLSSAQTSSI 863 (986)
Q Consensus 805 i~~qi~~~L~~LH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kL~DFG~a~~~~~~~~~~~~~ 863 (986)
|+.||+.||+||| +. +|+||||||+|||++.++ .+||+|||+|+.... .
T Consensus 166 i~~qi~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~ 235 (336)
T 2vuw_A 166 ILHQLTASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------G 235 (336)
T ss_dssp HHHHHHHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------T
T ss_pred HHHHHHHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------C
Confidence 9999999999999 89 999999999999999887 999999999986532 1
Q ss_pred cccccccccccccccCCCcCcccchhhHHHH-HHHHHhCCCCCC
Q 046598 864 GAKGSIGYIAPEYGLGSEVSISGDVYSYGIL-LLELITRKKPTD 906 (986)
Q Consensus 864 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvv-l~elltg~~pf~ 906 (986)
...||+.|+|||++.+.. +.++||||+|++ .+++++|..||.
T Consensus 236 ~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 236 IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 346999999999998776 899999998777 788899999974
No 295
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=1.8e-31 Score=296.02 Aligned_cols=289 Identities=19% Similarity=0.286 Sum_probs=163.6
Q ss_pred ccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeec
Q 046598 110 RRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFL 189 (986)
Q Consensus 110 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 189 (986)
.+|++++++++.++ .+|..+. ++|++|+|++|.+++..+..|+++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 35667777777666 4555443 45666666666666555556666666666666666666555666666666666666
Q ss_pred cCCcccCcCcchhhccCCCceeecccccccccCCccccCCCCccEEeccccccccccCCcccccccccceEEecCceec-
Q 046598 190 SGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLT- 268 (986)
Q Consensus 190 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~- 268 (986)
++|+++ .+|..+. ++|++|++++|++++..+..+.++ ++|++|++++|+++
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l-------------------------~~L~~L~l~~n~l~~ 159 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGL-------------------------NQMIVVELGTNPLKS 159 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTC-------------------------TTCCEEECCSSCCCG
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCC-------------------------ccccEEECCCCcCCc
Confidence 666665 3444332 456666666666554433344443 34444444444443
Q ss_pred -ccCCccccCCCCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccC
Q 046598 269 -GAIPPTISNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGS 347 (986)
Q Consensus 269 -~~~p~~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~ 347 (986)
+..+..+.++++|+.|++++|.++.++.
T Consensus 160 ~~~~~~~~~~l~~L~~L~l~~n~l~~l~~--------------------------------------------------- 188 (330)
T 1xku_A 160 SGIENGAFQGMKKLSYIRIADTNITTIPQ--------------------------------------------------- 188 (330)
T ss_dssp GGBCTTGGGGCTTCCEEECCSSCCCSCCS---------------------------------------------------
T ss_pred cCcChhhccCCCCcCEEECCCCccccCCc---------------------------------------------------
Confidence 2445556666666666666655543221
Q ss_pred CCcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCccccc
Q 046598 348 LPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGN 427 (986)
Q Consensus 348 ~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 427 (986)
.+. ++|+.|++++|++++..|..|..+++|++|++++|.+++..+..|..+++|++|+|++|+++
T Consensus 189 ---~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--------- 253 (330)
T 1xku_A 189 ---GLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV--------- 253 (330)
T ss_dssp ---SCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS---------
T ss_pred ---ccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc---------
Confidence 111 34556666666666555666666666666666666666555555655555555555555544
Q ss_pred ccccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccC------CCcceEEEccCCcccc--cCCccccc
Q 046598 428 LKLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGL------SSSLIVLDLSRNQLTG--SIPSEVGN 499 (986)
Q Consensus 428 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~------~~~L~~L~Ls~N~l~~--~~p~~~~~ 499 (986)
.+|..+..+++|++|++++|+|+ .+|...+.. ...|+.|++++|.+.. ..|..|..
T Consensus 254 ---------------~lp~~l~~l~~L~~L~l~~N~i~-~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~ 317 (330)
T 1xku_A 254 ---------------KVPGGLADHKYIQVVYLHNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRC 317 (330)
T ss_dssp ---------------SCCTTTTTCSSCCEEECCSSCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTT
T ss_pred ---------------cCChhhccCCCcCEEECCCCcCC-ccChhhcCCcccccccccccceEeecCcccccccCcccccc
Confidence 55666777777777777777777 455443432 2445566666665542 33444555
Q ss_pred ccccchhhccCc
Q 046598 500 LKNLEILNVFGN 511 (986)
Q Consensus 500 l~~L~~L~Ls~N 511 (986)
+++|+.++|++|
T Consensus 318 ~~~l~~l~L~~N 329 (330)
T 1xku_A 318 VYVRAAVQLGNY 329 (330)
T ss_dssp CCCGGGEEC---
T ss_pred ccceeEEEeccc
Confidence 555555555555
No 296
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.98 E-value=6.3e-32 Score=299.85 Aligned_cols=130 Identities=21% Similarity=0.253 Sum_probs=77.3
Q ss_pred cceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccccccEEEecc
Q 046598 358 TLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSY 437 (986)
Q Consensus 358 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~ 437 (986)
+|+.|++++|++++..+..|..+++|++|++++|.+++..+..|..+++|++|+|++|+++
T Consensus 194 ~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~------------------- 254 (332)
T 2ft3_A 194 TLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS------------------- 254 (332)
T ss_dssp SCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-------------------
T ss_pred CCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-------------------
Confidence 4556666666666666666777777777777777777666666666666666666666555
Q ss_pred cccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccC------CCcceEEEccCCccc--ccCCcccccccccchhhcc
Q 046598 438 NFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGL------SSSLIVLDLSRNQLT--GSIPSEVGNLKNLEILNVF 509 (986)
Q Consensus 438 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~------~~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls 509 (986)
.+|..+..+++|++|++++|+|+ .+|...+.. ...|+.|++++|.+. +..|..|..+++|+.|+++
T Consensus 255 -----~lp~~l~~l~~L~~L~l~~N~l~-~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~ 328 (332)
T 2ft3_A 255 -----RVPAGLPDLKLLQVVYLHTNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFG 328 (332)
T ss_dssp -----BCCTTGGGCTTCCEEECCSSCCC-BCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC-
T ss_pred -----ecChhhhcCccCCEEECCCCCCC-ccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhcc
Confidence 45555666666777777777776 444333332 234566666666555 3445555556666666665
Q ss_pred Ccc
Q 046598 510 GNK 512 (986)
Q Consensus 510 ~N~ 512 (986)
+|+
T Consensus 329 ~n~ 331 (332)
T 2ft3_A 329 NYK 331 (332)
T ss_dssp ---
T ss_pred ccc
Confidence 553
No 297
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=2.8e-31 Score=294.49 Aligned_cols=198 Identities=19% Similarity=0.235 Sum_probs=119.5
Q ss_pred ceEEEccCCcccccCCccccCCCCCCEEEccCcccc--CcCCCcccCCCCCCEEEccCccceeecCcccccccccEEEec
Q 046598 359 LEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLS--GTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLS 436 (986)
Q Consensus 359 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~ 436 (986)
|+.|++++|++++..+..|..+++|++|++++|.++ +..+..|..+++|++|++++|+++. +
T Consensus 123 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l--------------- 186 (330)
T 1xku_A 123 LQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-I--------------- 186 (330)
T ss_dssp CCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-C---------------
T ss_pred ccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-C---------------
Confidence 444555555555555556666777777777777775 3566677777777777777777663 2
Q ss_pred ccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCcccccc
Q 046598 437 YNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGE 516 (986)
Q Consensus 437 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 516 (986)
|..+. ++|++|++++|++++..|.. +..+++|+.|+|++|++++..+..+..+++|++|+|++|+++ .
T Consensus 187 --------~~~~~--~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~ 254 (330)
T 1xku_A 187 --------PQGLP--PSLTELHLDGNKITKVDAAS-LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-K 254 (330)
T ss_dssp --------CSSCC--TTCSEEECTTSCCCEECTGG-GTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-S
T ss_pred --------Ccccc--ccCCEEECCCCcCCccCHHH-hcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-c
Confidence 22111 34555555555555322222 445555555555555555544455556666666666666665 5
Q ss_pred CcccccCCccccEEecccccccccCCccccC------CCCCCEEeCCCccCcc--cCchhhhcccccceeeccCCc
Q 046598 517 IPSTLGSCIKLEQLEMQENFLQGPIPSSLSS------LRGLSVLDLSQNNLSG--KIPELLIRLQLVKNLNLSNND 584 (986)
Q Consensus 517 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~l~ls~N~ 584 (986)
+|..+..+++|++|+|++|+|++..+..|.. ...|+.|++++|++.. ..|..|..+..++.++|++|+
T Consensus 255 lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 255 VPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 5666666666666666666666555555543 3677888888888753 566778888888888888874
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=3e-35 Score=342.89 Aligned_cols=385 Identities=20% Similarity=0.164 Sum_probs=194.3
Q ss_pred CCCEEEccCCCccccCCc-chhccccCceeeceecccCC----CCccchhcCccccceecccccccCccCcccc-CCC--
Q 046598 87 FLKVLRLYNNSFNHEIPS-EFDRLRRLQVLALHYNSIGG----AIPANISSCSNLIQLRLFHNQLVGKIPSELS-SLS-- 158 (986)
Q Consensus 87 ~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~-- 158 (986)
.|++|||++|+++..... .|..+++|++|+|++|++++ .++..+..+++|++|+|++|.+.+..+..+. .++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 455555555555433222 25555666666666666553 2344455556666666666665543332222 233
Q ss_pred --CCCeEEccCCcCCC----CcccccCCCcCcceeeccCCcccCcCcchhhc-----cCCCceeeccccccccc----CC
Q 046598 159 --KIEHISVNDNNLTG----SIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGW-----LKNLVNLTMAQNRLSGT----IP 223 (986)
Q Consensus 159 --~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~----~p 223 (986)
+|++|+|++|+++. .++..|.++++|++|+|++|.+++..+..+.. .++|++|+|++|++++. ++
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 163 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHH
Confidence 46666666666652 34555666666666666666665433333322 34566666666666542 23
Q ss_pred ccccCCCCccEEeccccccccccCCcccc----cccccceEEecCceeccc----CCccccCCCCCcEEecccccccCCC
Q 046598 224 SSIFNISSITGFDAGVNKIQGAIPLDYGF----SLQNLQFFSVGENQLTGA----IPPTISNASNLEIFHGSVNKLTGAA 295 (986)
Q Consensus 224 ~~l~~l~~L~~L~l~~N~l~~~~p~~~~~----~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~ls~N~l~~~~ 295 (986)
..+..+++|+.|++++|.+....+..+.. ..++|++|++++|.+++. ++..+..+++|+.|++++|+++...
T Consensus 164 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 243 (461)
T 1z7x_W 164 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 243 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHH
Confidence 34444455555555555544322222211 233666666666666642 3455555666666666666554210
Q ss_pred chhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCCCcccccccccceEEEccCCccccc---
Q 046598 296 PYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGN--- 372 (986)
Q Consensus 296 ~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~--- 372 (986)
... +...+....++|+.|++++|++++.
T Consensus 244 -----~~~--------------------------------------------l~~~~~~~~~~L~~L~L~~n~l~~~~~~ 274 (461)
T 1z7x_W 244 -----MAE--------------------------------------------LCPGLLHPSSRLRTLWIWECGITAKGCG 274 (461)
T ss_dssp -----HHH--------------------------------------------HHHHHTSTTCCCCEEECTTSCCCHHHHH
T ss_pred -----HHH--------------------------------------------HHHHHhcCCCCceEEECcCCCCCHHHHH
Confidence 000 0000000112344444444444432
Q ss_pred -CCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCccccc-ccccEEEecccccCCC----CCc
Q 046598 373 -IPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGN-LKLFILYLSYNFLQGS----IPS 446 (986)
Q Consensus 373 -~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-~~L~~L~L~~N~l~~~----~p~ 446 (986)
++..+..+++|++|++++|.+++..+..+... .... .+|++|++++|.+++. ++.
T Consensus 275 ~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~-------------------l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 275 DLCRVLRAKESLKELSLAGNELGDEGARLLCET-------------------LLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp HHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHH-------------------HTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred HHHHHHhhCCCcceEECCCCCCchHHHHHHHHH-------------------hccCCccceeeEcCCCCCchHHHHHHHH
Confidence 23334444444444444444443222222211 0000 1355555555555433 344
Q ss_pred ccCCCCCCCeeecCCCccCCCCCccccc----CCCcceEEEccCCcccc----cCCcccccccccchhhccCccccccCc
Q 046598 447 SLGRYETLTTIDLSNNNLTGTIPPQFIG----LSSSLIVLDLSRNQLTG----SIPSEVGNLKNLEILNVFGNKLKGEIP 518 (986)
Q Consensus 447 ~~~~l~~L~~L~L~~N~l~~~ip~~~~~----~~~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p 518 (986)
.+..+++|++|++++|++++..+..+.. ..++|+.|++++|++++ .+|..+..+++|++|+|++|++++...
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~ 415 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGI 415 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHH
T ss_pred HHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHH
Confidence 5556677777777777776433322111 14578888888888875 567777777888888888888775322
Q ss_pred cccc-----CCccccEEecccccccc
Q 046598 519 STLG-----SCIKLEQLEMQENFLQG 539 (986)
Q Consensus 519 ~~~~-----~l~~L~~L~L~~N~l~~ 539 (986)
..+. ...+|+.|++.++.+..
T Consensus 416 ~~l~~~l~~~~~~L~~L~~~~~~~~~ 441 (461)
T 1z7x_W 416 LQLVESVRQPGCLLEQLVLYDIYWSE 441 (461)
T ss_dssp HHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred HHHHHHhccCCcchhheeecccccCH
Confidence 2211 13356666666665553
No 299
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1e-31 Score=300.90 Aligned_cols=292 Identities=20% Similarity=0.216 Sum_probs=219.0
Q ss_pred CCCCCCCCCCcceeeEecCCCCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceec
Q 046598 41 ASWNESSHFCQWRGVTCSRRHQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYN 120 (986)
Q Consensus 41 ~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 120 (986)
..|.....+|.|.|+ |+ +++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 21 ~~~~~~~~~C~~~~~-c~----------~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n 86 (353)
T 2z80_A 21 ESSNQASLSCDRNGI-CK----------GSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSN 86 (353)
T ss_dssp ------CCEECTTSE-EE----------CCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cCCCccCCCCCCCeE-ee----------CCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCC
Confidence 456667788999998 74 4566676 6676655 58999999999999877779999999999999999
Q ss_pred ccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcc-cccCCCcCcceeeccCC-cccCcC
Q 046598 121 SIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIP-SSLGNLSSIRSLFLSGN-NLEGSI 198 (986)
Q Consensus 121 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~ 198 (986)
++++..|..|.++++|++|+|++|++++..+..|+++++|++|+|++|++++..+ ..|.++++|++|++++| .+++..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~ 166 (353)
T 2z80_A 87 GINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQ 166 (353)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEEC
T ss_pred ccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccC
Confidence 9998888889999999999999999996666669999999999999999995444 47899999999999999 577677
Q ss_pred cchhhccCCCceeecccccccccCCccccCCCCccEEeccccccccccCCcccccccccceEEecCceecccCCccccCC
Q 046598 199 PDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISNA 278 (986)
Q Consensus 199 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 278 (986)
+..|+.+++|++|++++|++++..|..+.++++|+.|++++|.+. .+|..++..+++|+.|++++|++++..+..+...
T Consensus 167 ~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 245 (353)
T 2z80_A 167 RKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTG 245 (353)
T ss_dssp TTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCCC-----
T ss_pred HHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccccccccccccc
Confidence 788999999999999999999888888888888888888877764 4454444456666666666666664433222110
Q ss_pred CCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCCCccccccccc
Q 046598 279 SNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSLPACISNLSTT 358 (986)
Q Consensus 279 ~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~ 358 (986)
... ..
T Consensus 246 --------------------------------------------------~~~-------------------------~~ 250 (353)
T 2z80_A 246 --------------------------------------------------ETN-------------------------SL 250 (353)
T ss_dssp ---------------------------------------------------CC-------------------------CC
T ss_pred --------------------------------------------------ccc-------------------------ch
Confidence 000 12
Q ss_pred ceEEEccCCcccc----cCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecC
Q 046598 359 LEVLLLDNNQIFG----NIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIP 422 (986)
Q Consensus 359 L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 422 (986)
++.++|+++.+.+ .+|..+..+++|++|++++|+++...+..|..+++|++|+|++|.+.+..|
T Consensus 251 l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 251 IKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 3333444444432 356778889999999999999984444446889999999999998886544
No 300
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=3.6e-34 Score=333.74 Aligned_cols=362 Identities=21% Similarity=0.192 Sum_probs=178.5
Q ss_pred CCCCeEEccCCcCCCCcccc-cCCCcCcceeeccCCcccC----cCcchhhccCCCceeecccccccccCCccccCCCCc
Q 046598 158 SKIEHISVNDNNLTGSIPSS-LGNLSSIRSLFLSGNNLEG----SIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSI 232 (986)
Q Consensus 158 ~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 232 (986)
++|++|+|++|+++...... +..+++|++|+|++|+++. .++..+..+++|++|+|++|++++..+..+
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l------ 76 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCV------ 76 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHH------
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHH------
Confidence 45666666666665333222 5556666666666666653 234455555666666666666554322222
Q ss_pred cEEeccccccccccCCccccccc----ccceEEecCceecc----cCCccccCCCCCcEEecccccccCCCchhhhhhhH
Q 046598 233 TGFDAGVNKIQGAIPLDYGFSLQ----NLQFFSVGENQLTG----AIPPTISNASNLEIFHGSVNKLTGAAPYLEKLQRL 304 (986)
Q Consensus 233 ~~L~l~~N~l~~~~p~~~~~~l~----~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L 304 (986)
...++ +|++|++++|+++. .++..+..+++|+.|++++|.++.... ..+
T Consensus 77 ------------------~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~-----~~l 133 (461)
T 1z7x_W 77 ------------------LQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGL-----QLL 133 (461)
T ss_dssp ------------------HHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHH-----HHH
T ss_pred ------------------HHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHH-----HHH
Confidence 22233 57777777777763 457777788888888888877653211 000
Q ss_pred hhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCC----CcccccccccceEEEccCCcccccCCcccc--
Q 046598 305 LVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSL----PACISNLSTTLEVLLLDNNQIFGNIPAAIG-- 378 (986)
Q Consensus 305 ~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~----p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~-- 378 (986)
... -.....+|+.|+++.|.+++.. +..+..+ ++|+.|++++|.+.+..+..+.
T Consensus 134 ~~~-------------------l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~-~~L~~L~L~~n~i~~~~~~~l~~~ 193 (461)
T 1z7x_W 134 CEG-------------------LLDPQCRLEKLQLEYCSLSAASCEPLASVLRAK-PDFKELTVSNNDINEAGVRVLCQG 193 (461)
T ss_dssp HHH-------------------HTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHC-TTCCEEECCSSBCHHHHHHHHHHH
T ss_pred HHH-------------------HhcCCCcceEEECCCCCCCHHHHHHHHHHHhhC-CCCCEEECcCCCcchHHHHHHHHH
Confidence 000 0011223444444444444321 2222222 3455555555555443333332
Q ss_pred ---CCCCCCEEEccCccccCc----CCCcccCCCCCCEEEccCccceeecCcccccccccEEEecccccCCCCCcccCCC
Q 046598 379 ---KFVNLQRLDMCSNRLSGT----IPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSYNFLQGSIPSSLGRY 451 (986)
Q Consensus 379 ---~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l 451 (986)
..++|++|++++|.+++. ++..+..+++|++|+|++|++.+.....+. +..+..+
T Consensus 194 l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~------------------~~~~~~~ 255 (461)
T 1z7x_W 194 LKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELC------------------PGLLHPS 255 (461)
T ss_dssp HHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHH------------------HHHTSTT
T ss_pred HhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHH------------------HHHhcCC
Confidence 234555555555555532 244444555555555555555432111000 1112234
Q ss_pred CCCCeeecCCCccCCC----CCcccccCCCcceEEEccCCcccccCCcccccc-----cccchhhccCcccccc----Cc
Q 046598 452 ETLTTIDLSNNNLTGT----IPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNL-----KNLEILNVFGNKLKGE----IP 518 (986)
Q Consensus 452 ~~L~~L~L~~N~l~~~----ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~----~p 518 (986)
++|++|++++|++++. ++.. +..+++|+.|++++|.+++..+..+... ++|+.|+|++|.+++. ++
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~-l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 334 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRV-LRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHH-HHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHH-HhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHH
Confidence 4555555555555421 2322 2334455555555555543322222221 3555555555555533 34
Q ss_pred ccccCCccccEEecccccccccCCccccC-----CCCCCEEeCCCccCcc----cCchhhhcccccceeeccCCcccc
Q 046598 519 STLGSCIKLEQLEMQENFLQGPIPSSLSS-----LRGLSVLDLSQNNLSG----KIPELLIRLQLVKNLNLSNNDLEG 587 (986)
Q Consensus 519 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~l~ls~N~l~~ 587 (986)
..+..+++|++|+|++|.+++..+..+.. .++|+.|+|++|++++ .+|..+..+++|++|+|++|++++
T Consensus 335 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred HHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 44455555666666666555443333332 4456666666666654 455555556666666666665554
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=3.2e-29 Score=274.76 Aligned_cols=249 Identities=21% Similarity=0.242 Sum_probs=217.8
Q ss_pred CCCCCcceeeEecCCC---------CeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccc--cCCcchhccccCce
Q 046598 46 SSHFCQWRGVTCSRRH---------QRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNH--EIPSEFDRLRRLQV 114 (986)
Q Consensus 46 ~~~~c~w~gv~c~~~~---------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~ 114 (986)
..+.|.|++|.|+... ..++.|+|++|+++...+..|+++++|++|+|++|+++. ..|..+..+++|++
T Consensus 3 ~~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 82 (306)
T 2z66_A 3 SRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKY 82 (306)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCE
T ss_pred CCCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCE
Confidence 3456899999998642 468999999999985444458999999999999999984 34778888999999
Q ss_pred eeceecccCCCCccchhcCccccceecccccccCccC-ccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCc
Q 046598 115 LALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIP-SELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNN 193 (986)
Q Consensus 115 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 193 (986)
|+|++|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..+..|.++++|++|+|++|.
T Consensus 83 L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 161 (306)
T 2z66_A 83 LDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 161 (306)
T ss_dssp EECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCE
T ss_pred EECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCc
Confidence 999999998 678889999999999999999996655 689999999999999999998889999999999999999999
Q ss_pred ccC-cCcchhhccCCCceeecccccccccCCccccCCCCccEEeccccccccccCCcccccccccceEEecCceecccCC
Q 046598 194 LEG-SIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAIP 272 (986)
Q Consensus 194 l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p 272 (986)
+++ ..|..|..+++|++|+|++|++++..|..+.++++|+.|++++|.+.+..+ ..+..+++|++|++++|++++..|
T Consensus 162 l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~ 240 (306)
T 2z66_A 162 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT-FPYKCLNSLQVLDYSLNHIMTSKK 240 (306)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCS-GGGTTCTTCCEEECTTSCCCBCSS
T ss_pred cccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccCh-hhccCcccCCEeECCCCCCcccCH
Confidence 986 588899999999999999999998889999999999999999999985444 345578999999999999999999
Q ss_pred ccccCC-CCCcEEecccccccCCCc
Q 046598 273 PTISNA-SNLEIFHGSVNKLTGAAP 296 (986)
Q Consensus 273 ~~l~~l-~~L~~L~ls~N~l~~~~~ 296 (986)
..+..+ ++|+.|++++|.+++..+
T Consensus 241 ~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 241 QELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp SSCCCCCTTCCEEECTTCCEECSGG
T ss_pred HHHHhhhccCCEEEccCCCeecccC
Confidence 999998 499999999999987643
No 302
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=6e-32 Score=325.58 Aligned_cols=475 Identities=14% Similarity=0.103 Sum_probs=254.3
Q ss_pred HhHHHHHHHHHHhccCCCcCCCCCCCCCCCCCcceeeEecCCCCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCc
Q 046598 19 ETDRLALLELKSKITHDPLGVLASWNESSHFCQWRGVTCSRRHQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSF 98 (986)
Q Consensus 19 ~~~~~~ll~~k~~~~~~~~~~l~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l 98 (986)
|+| .|..+.+.+. ++ ..+..+ +.-|++|.++.+... +... +.+ ......+..+..++.|+.|+|+++..
T Consensus 17 Pde--il~~I~~~L~-~~-~d~~~~--s~vck~W~~~~~~~~--~~l~--~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~ 85 (592)
T 3ogk_B 17 VDD--VIEQVMTYIT-DP-KDRDSA--SLVCRRWFKIDSETR--EHVT--MAL-CYTATPDRLSRRFPNLRSLKLKGKPR 85 (592)
T ss_dssp GGG--THHHHHTTCC-CH-HHHHHH--TTSCHHHHHHHHHHC--CEEE--ESC-GGGSCHHHHHHHCTTCSEEEEECSCG
T ss_pred CHH--HHHHHHHhcC-CH-HHHHHH--HHHhHHHHHhhhccc--cEEE--Eee-ccccChHHHHHhCCCCeEEEecCCcc
Confidence 444 5677776662 21 111222 223458999965322 2222 222 12223344566788899999987533
Q ss_pred ---cccCCcchh------------ccccCceeeceecccCCCCccchhcC--ccccceeccccc-ccC-ccCccccCCCC
Q 046598 99 ---NHEIPSEFD------------RLRRLQVLALHYNSIGGAIPANISSC--SNLIQLRLFHNQ-LVG-KIPSELSSLSK 159 (986)
Q Consensus 99 ---~~~~p~~~~------------~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~Ls~N~-l~~-~~p~~~~~l~~ 159 (986)
.+.+|..++ .+++|++|+|++|.+++..+..++.. .+|++|+|++|. ++. .++..+.++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~ 165 (592)
T 3ogk_B 86 AAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRK 165 (592)
T ss_dssp GGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTT
T ss_pred hhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCC
Confidence 133443332 67888888888888876666666653 448888888776 221 12223346778
Q ss_pred CCeEEccCCcCCCC----cccccCCCcCcceeeccCCcccC----cCcchhhccCCCceeecccccccccCCccccCCCC
Q 046598 160 IEHISVNDNNLTGS----IPSSLGNLSSIRSLFLSGNNLEG----SIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISS 231 (986)
Q Consensus 160 L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 231 (986)
|++|+|++|.+++. ++..+.++++|++|+|++|.+++ .++..+..+++|++|+|++|.+.+ +|..+.++++
T Consensus 166 L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~ 244 (592)
T 3ogk_B 166 IKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAAN 244 (592)
T ss_dssp CSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTT
T ss_pred CCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhH
Confidence 88888888877655 44445667788888888887762 334445667778888887777764 5566666666
Q ss_pred ccEEeccccccccccCCcccccccccceEEecCceecccCCccccCCCCCcEEecccccccCCCchhhhhhhHhhhhhcc
Q 046598 232 ITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILG 311 (986)
Q Consensus 232 L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~ 311 (986)
|+.|+++..... ++ .+..+..+..+++|+.++++++....
T Consensus 245 L~~L~l~~~~~~--~~--------------------~~~~~~~l~~~~~L~~L~l~~~~~~~------------------ 284 (592)
T 3ogk_B 245 LEEFCGGSLNED--IG--------------------MPEKYMNLVFPRKLCRLGLSYMGPNE------------------ 284 (592)
T ss_dssp CCEEEECBCCCC--TT--------------------CTTSSSCCCCCTTCCEEEETTCCTTT------------------
T ss_pred HHhhcccccccc--cc--------------------hHHHHHHhhccccccccCccccchhH------------------
Confidence 666665532211 00 01223344555555555554432211
Q ss_pred CCCCCCCCCCcccccccccccccceeeccccccccCCCcccccccccceEEEccCCcccccCC-ccccCCCCCCEEEccC
Q 046598 312 NSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIP-AAIGKFVNLQRLDMCS 390 (986)
Q Consensus 312 n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~ 390 (986)
+|..+.. .++|+.|+|++|.+++... ..+..+++|++|++++
T Consensus 285 ------------------------------------l~~~~~~-~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~ 327 (592)
T 3ogk_B 285 ------------------------------------MPILFPF-AAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRN 327 (592)
T ss_dssp ------------------------------------GGGGGGG-GGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEG
T ss_pred ------------------------------------HHHHHhh-cCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccC
Confidence 1111111 1345555555555443322 2345566666666663
Q ss_pred ccccCcCCCcccCCCCCCEEEccC-----------ccceeecCcc-cc-cccccEEEecccccCCCCCcccCC-CCCCCe
Q 046598 391 NRLSGTIPPAIGELQNLKDLRLQR-----------NRFQGNIPPS-IG-NLKLFILYLSYNFLQGSIPSSLGR-YETLTT 456 (986)
Q Consensus 391 N~l~~~~~~~~~~l~~L~~L~Ls~-----------N~l~~~~~~~-~~-~~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~ 456 (986)
+...+.++..+..+++|++|+|++ |.+++..... .. ..+|++|+++.|.+++..+..++. +++|+.
T Consensus 328 ~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~ 407 (592)
T 3ogk_B 328 VIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCD 407 (592)
T ss_dssp GGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCE
T ss_pred ccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcE
Confidence 322222333334566666666662 4444321111 11 124556666555555544444444 566666
Q ss_pred eecC----CCccCCC-----CCcccccCCCcceEEEccCC--cccccCCccccc-ccccchhhccCccccc-cCcccccC
Q 046598 457 IDLS----NNNLTGT-----IPPQFIGLSSSLIVLDLSRN--QLTGSIPSEVGN-LKNLEILNVFGNKLKG-EIPSTLGS 523 (986)
Q Consensus 457 L~L~----~N~l~~~-----ip~~~~~~~~~L~~L~Ls~N--~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~-~~p~~~~~ 523 (986)
|+++ .|++++. ++. .+..+++|+.|++++| .+++..+..+.. +++|+.|+|++|++++ .++..+..
T Consensus 408 L~l~~~~~~n~l~~~p~~~~~~~-~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 486 (592)
T 3ogk_B 408 FRLVLLDREERITDLPLDNGVRS-LLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRG 486 (592)
T ss_dssp EEEEECSCCSCCSSCCCHHHHHH-HHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTC
T ss_pred EEEeecCCCccccCchHHHHHHH-HHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhc
Confidence 6664 5566532 111 1334566666666543 244433333332 5666666666666664 23444556
Q ss_pred CccccEEeccccccccc-CCccccCCCCCCEEeCCCccCcccCchhh-hcccccceeeccCC
Q 046598 524 CIKLEQLEMQENFLQGP-IPSSLSSLRGLSVLDLSQNNLSGKIPELL-IRLQLVKNLNLSNN 583 (986)
Q Consensus 524 l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~l~ls~N 583 (986)
+++|++|+|++|.+++. ++..+..+++|+.|+|++|+++..--..+ ..++.+....+..+
T Consensus 487 ~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 487 CPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp CTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred CcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 66666777776666543 22333456667777777776664422222 23455554444443
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.9e-29 Score=275.06 Aligned_cols=275 Identities=23% Similarity=0.199 Sum_probs=228.0
Q ss_pred eeeccccccccCCCcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCc--CCCcccCCCCCCEEEcc
Q 046598 336 WLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGT--IPPAIGELQNLKDLRLQ 413 (986)
Q Consensus 336 ~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~Ls 413 (986)
.++++.+.++ .+|..+. ++++.|+|++|+++...+..|.++++|++|+|++|.++.. .+..+..+++|++|+|+
T Consensus 11 ~l~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp EEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred EEEcCCCCcc-cCCCCCC---CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 4556666654 5666543 6799999999999976667789999999999999999833 36778889999999999
Q ss_pred CccceeecCcccccccccEEEecccccCCCCC-cccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccc-
Q 046598 414 RNRFQGNIPPSIGNLKLFILYLSYNFLQGSIP-SSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTG- 491 (986)
Q Consensus 414 ~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~- 491 (986)
+|.+.+..+......+|++|++++|.+++..+ ..+..+++|++|++++|++++..|. .+..+++|++|++++|.+++
T Consensus 87 ~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNG-IFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTT-TTTTCTTCCEEECTTCEEGGG
T ss_pred CCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchh-hcccCcCCCEEECCCCccccc
Confidence 99999644333334469999999999997665 6899999999999999999855554 47888999999999999986
Q ss_pred cCCcccccccccchhhccCccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhc
Q 046598 492 SIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIR 571 (986)
Q Consensus 492 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 571 (986)
.+|..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|+.|+|++|++++..|..+..
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 245 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH 245 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCC
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHh
Confidence 57899999999999999999999888999999999999999999999888888999999999999999999999999999
Q ss_pred cc-ccceeeccCCccccccCCcc---ccccccceeeeCCcccccCCCC
Q 046598 572 LQ-LVKNLNLSNNDLEGVVPTQG---VFKNASITSVFGNLKLCGGIPE 615 (986)
Q Consensus 572 l~-~L~~l~ls~N~l~~~~p~~~---~~~~~~~~~~~~n~~lcg~~~~ 615 (986)
++ +|++|+|++|++++..+... .+.....+....+...|..|..
T Consensus 246 ~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~ 293 (306)
T 2z66_A 246 FPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSD 293 (306)
T ss_dssp CCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGG
T ss_pred hhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchh
Confidence 85 99999999999998765431 1223334445566667766543
No 304
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=3.1e-30 Score=283.25 Aligned_cols=204 Identities=17% Similarity=0.208 Sum_probs=123.5
Q ss_pred cCCCCCCEEEccCCCccccCCcchhccccCceeeceeccc-CCCCccchh-------cCccccceecccccccCccCccc
Q 046598 83 GNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSI-GGAIPANIS-------SCSNLIQLRLFHNQLVGKIPSEL 154 (986)
Q Consensus 83 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~ 154 (986)
+..++|++|++++|.+ .+|..+... |++|+|++|++ .+.+|..+. .+++|++|+|++|++++.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 3445667777777777 566655544 77777777777 344565554 57777777777777777677665
Q ss_pred --cCCCCCCeEEccCCcCCCCcccccCCC-----cCcceeeccCCcccCcCcchhhccCCCceeeccccccccc--CCcc
Q 046598 155 --SSLSKIEHISVNDNNLTGSIPSSLGNL-----SSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGT--IPSS 225 (986)
Q Consensus 155 --~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~ 225 (986)
+.+++|++|+|++|++++. |..++++ ++|++|+|++|++++..|..|+.+++|++|+|++|++.+. +|..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 6777777777777777755 6666665 6777777777777766667777777777777777776554 2333
Q ss_pred c--cCCCCccEEecccccccc--ccCCcccccccccceEEecCceecccCC-ccccCCCCCcEEecccccc
Q 046598 226 I--FNISSITGFDAGVNKIQG--AIPLDYGFSLQNLQFFSVGENQLTGAIP-PTISNASNLEIFHGSVNKL 291 (986)
Q Consensus 226 l--~~l~~L~~L~l~~N~l~~--~~p~~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~ls~N~l 291 (986)
+ .++++|+.|++++|++.+ .++..++..+++|++|++++|++++..| ..+..+++|+.|++++|++
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l 265 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGL 265 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCC
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCcc
Confidence 3 555556666665555542 2222333344555555555555554443 2333344444444444443
No 305
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=8.5e-30 Score=296.69 Aligned_cols=244 Identities=23% Similarity=0.191 Sum_probs=197.7
Q ss_pred ccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccccccEEEec
Q 046598 357 TTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLS 436 (986)
Q Consensus 357 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~ 436 (986)
++|+.|+|++|+|++..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.|++..+. .+|++|+++
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~----~~L~~L~L~ 107 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG----PSIETLHAA 107 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC----TTCCEEECC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC----CCcCEEECc
Confidence 478999999999998888899999999999999999987665 88999999999999999875543 578999999
Q ss_pred ccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccc-cccccchhhccCccccc
Q 046598 437 YNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVG-NLKNLEILNVFGNKLKG 515 (986)
Q Consensus 437 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~ 515 (986)
+|.|++..+. .+++|+.|+|++|+|++..|.. ++.+++|+.|+|++|.|++..|..+. .+++|+.|+|++|.|++
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLD-EGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBC-GGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchh-hcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 9999977665 3578999999999998555544 67788999999999999988888776 78999999999999986
Q ss_pred cCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccc-cccCCc-c
Q 046598 516 EIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLE-GVVPTQ-G 593 (986)
Q Consensus 516 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~-~~~p~~-~ 593 (986)
. | .+..+++|+.|+|++|.|++. |..+..+++|+.|+|++|+|++ +|..+..+++|+.|++++|++. +.+|.. .
T Consensus 184 ~-~-~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~ 259 (487)
T 3oja_A 184 V-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (487)
T ss_dssp E-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHT
T ss_pred c-c-ccccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHH
Confidence 5 3 344689999999999999964 4458899999999999999995 7878888999999999999998 333332 3
Q ss_pred ccccccceeee-------CCcccccCCC
Q 046598 594 VFKNASITSVF-------GNLKLCGGIP 614 (986)
Q Consensus 594 ~~~~~~~~~~~-------~n~~lcg~~~ 614 (986)
.++.+..+.+. +|+..|.++.
T Consensus 260 ~l~~L~~l~~~~~~~~~~~~~~~c~~~~ 287 (487)
T 3oja_A 260 KNQRVQTVAKQTVKKLTGQNEEECTVPT 287 (487)
T ss_dssp TCHHHHHHHHHHHHHHTSSSSCCCSSTT
T ss_pred hCCCCcEEeccccccccCCCcccccCCc
Confidence 44445545444 5666666543
No 306
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2.4e-28 Score=264.71 Aligned_cols=251 Identities=22% Similarity=0.194 Sum_probs=179.0
Q ss_pred eEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccc-cccEEEeccc
Q 046598 360 EVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNL-KLFILYLSYN 438 (986)
Q Consensus 360 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~L~~L~L~~N 438 (986)
+.++.+++.++ .+|..+ .++|++|++++|.+++..+..|..+++|++|+|++|++++..|..+..+ +|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 34556666665 334322 3466666666666665555666666666666666666666656655544 4667777777
Q ss_pred c-cCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccC
Q 046598 439 F-LQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEI 517 (986)
Q Consensus 439 ~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 517 (986)
. +....|..|..+++|++|++++|++++ +++..+..+++|++|++++|++++..+..|..+++|++|+|++|++++..
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQE-LGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCE-ECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 5 665667778888888888888888874 44444677788888888888888666666788888888888888888666
Q ss_pred cccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCCcccccc
Q 046598 518 PSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPTQGVFKN 597 (986)
Q Consensus 518 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~ 597 (986)
+..|..+++|++|+|++|.+++..|..|..+++|+.|+|++|++++..+..+..+++|++|++++|++.+..+....+..
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~ 249 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAW 249 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHH
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHH
Confidence 66788888888888888888887788888888888888888888877777788888888888888888877665544444
Q ss_pred ccceeeeCCcccccCCC
Q 046598 598 ASITSVFGNLKLCGGIP 614 (986)
Q Consensus 598 ~~~~~~~~n~~lcg~~~ 614 (986)
++......|...|..|.
T Consensus 250 l~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 250 LQKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp HHHCCSEECCCBEEESG
T ss_pred HHhcccccCccccCCch
Confidence 55555566666666554
No 307
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=3e-28 Score=282.22 Aligned_cols=251 Identities=21% Similarity=0.207 Sum_probs=207.9
Q ss_pred ceeeccccccccCCCcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccC
Q 046598 335 KWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQR 414 (986)
Q Consensus 335 ~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 414 (986)
..++.+...++ .+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|.|++..+..|.++++|++|+|++
T Consensus 57 ~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP---SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred cEEEECCCCcC-ccCCCCC---CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 44556655555 5666543 5788899999999988888999999999999999999988888899999999999999
Q ss_pred ccceeecCcccccc-cccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccC
Q 046598 415 NRFQGNIPPSIGNL-KLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSI 493 (986)
Q Consensus 415 N~l~~~~~~~~~~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~ 493 (986)
|+|++..+..+..+ +|++|+|++|.|++..+..|..+++|+.|++++|+..+.++...+..+++|+.|+|++|++++ +
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~ 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-M 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-C
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-c
Confidence 99987777777655 588999999998877777888889999999988544447777778888889999999998884 4
Q ss_pred CcccccccccchhhccCccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhccc
Q 046598 494 PSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQ 573 (986)
Q Consensus 494 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 573 (986)
| .+..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+..++
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 4 578888899999999999888888888889999999999999888888888888999999999998877777888888
Q ss_pred ccceeeccCCccccccCC
Q 046598 574 LVKNLNLSNNDLEGVVPT 591 (986)
Q Consensus 574 ~L~~l~ls~N~l~~~~p~ 591 (986)
+|+.|+|++|++.+...-
T Consensus 291 ~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 291 YLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp TCCEEECCSSCEECSTTT
T ss_pred CCCEEEccCCCcCCCCCc
Confidence 888888888888876543
No 308
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2.4e-28 Score=282.03 Aligned_cols=248 Identities=24% Similarity=0.266 Sum_probs=161.5
Q ss_pred eeeccccccccCCCcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCc
Q 046598 336 WLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRN 415 (986)
Q Consensus 336 ~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 415 (986)
.++...++++ .+|..+. ..++.|+|++|+|++..+..|.++++|++|+|++|.|++..+..|.++++|++|+|++|
T Consensus 47 ~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 47 KVICVRKNLR-EVPDGIS---TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp EEECCSCCCS-SCCSCCC---TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCCCC---CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 4444444444 4555443 45677777777777766777777777777777777777666667777777777777777
Q ss_pred cceeecCcccccc-cccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCC
Q 046598 416 RFQGNIPPSIGNL-KLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIP 494 (986)
Q Consensus 416 ~l~~~~~~~~~~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p 494 (986)
+|++..+..+..+ +|++|+|++|.|++..+..|..+++|++|+|++|+..+.++...+..+++|+.|+|++|+|+ .+|
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~ 201 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP 201 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc
Confidence 7775555555544 46677777777666555666666677777776643333556555666666677777776666 344
Q ss_pred cccccccccchhhccCccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccc
Q 046598 495 SEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQL 574 (986)
Q Consensus 495 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 574 (986)
.+..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++
T Consensus 202 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 280 (440)
T 3zyj_A 202 -NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 280 (440)
T ss_dssp -CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTT
T ss_pred -ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccC
Confidence 3566666666666666666666666666666666666666666666666666666666666666666655566666666
Q ss_pred cceeeccCCcccccc
Q 046598 575 VKNLNLSNNDLEGVV 589 (986)
Q Consensus 575 L~~l~ls~N~l~~~~ 589 (986)
|+.|+|++|++.+..
T Consensus 281 L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 281 LERIHLHHNPWNCNC 295 (440)
T ss_dssp CCEEECCSSCEECSS
T ss_pred CCEEEcCCCCccCCC
Confidence 666666666666543
No 309
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1e-28 Score=292.95 Aligned_cols=292 Identities=22% Similarity=0.346 Sum_probs=187.3
Q ss_pred CCcCCCCCCCCCCCCCcceeeEec------CCCCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhc
Q 046598 35 DPLGVLASWNESSHFCQWRGVTCS------RRHQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDR 108 (986)
Q Consensus 35 ~~~~~l~~w~~~~~~c~w~gv~c~------~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 108 (986)
|....+++|..+.+||.|+|..|. .....++.+++++++++ .+|..+. ++|++|+|++|+++ .+|. .
T Consensus 7 ~~~~~w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~ 79 (622)
T 3g06_A 7 EYDAVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---L 79 (622)
T ss_dssp ---CHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---C
T ss_pred HHHHHHHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---c
Confidence 444567789878889999774321 11234788899999988 7777766 78899999999888 4555 5
Q ss_pred cccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceee
Q 046598 109 LRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLF 188 (986)
Q Consensus 109 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 188 (986)
+++|++|+|++|+|+ .+|. .+++|++|+|++|.+++ +|. .+++|++|++++|++++ +|.. +++|++|+
T Consensus 80 l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~ 147 (622)
T 3g06_A 80 PPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELS 147 (622)
T ss_dssp CTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEE
T ss_pred CCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEE
Confidence 688889999999888 4555 67888888888888884 444 56788888888888884 4543 47888888
Q ss_pred ccCCcccCcCcchhhccCCCceeecccccccccCCccccCCCCccEEeccccccccccCCcccccccccceEEecCceec
Q 046598 189 LSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLT 268 (986)
Q Consensus 189 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~ 268 (986)
|++|++++ +|. .+++|+.|++++|++++ +| ..+++|+.|++++|.+.+ +|. .+++|+.|++++|.++
T Consensus 148 Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~----~~~~L~~L~L~~N~l~ 214 (622)
T 3g06_A 148 VSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPT----LPSELYKLWAYNNRLT 214 (622)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCS
T ss_pred CcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCC----ccchhhEEECcCCccc
Confidence 88888874 443 34677888888888873 45 334556666666666553 332 1244555555555554
Q ss_pred ccCCccccCCCCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCC
Q 046598 269 GAIPPTISNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSL 348 (986)
Q Consensus 269 ~~~p~~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~ 348 (986)
.+|.. +++|+.|++++|++++ +
T Consensus 215 -~l~~~---~~~L~~L~Ls~N~L~~------------------------------------------------------l 236 (622)
T 3g06_A 215 -SLPAL---PSGLKELIVSGNRLTS------------------------------------------------------L 236 (622)
T ss_dssp -SCCCC---CTTCCEEECCSSCCSC------------------------------------------------------C
T ss_pred -ccCCC---CCCCCEEEccCCccCc------------------------------------------------------C
Confidence 22221 2344444444444432 2
Q ss_pred CcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCccc
Q 046598 349 PACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSI 425 (986)
Q Consensus 349 p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 425 (986)
| ...++|+.|+|++|+|+. +|. .+++|+.|+|++|+|+ .+|..|..+++|+.|+|++|.+++..|..+
T Consensus 237 p----~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l 304 (622)
T 3g06_A 237 P----VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 304 (622)
T ss_dssp C----CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHH
T ss_pred C----CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHH
Confidence 2 111345666666666663 333 4566667777777776 556666666666666666666665554443
No 310
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=5.8e-28 Score=278.79 Aligned_cols=250 Identities=24% Similarity=0.250 Sum_probs=225.6
Q ss_pred cceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccc-cccEEEec
Q 046598 358 TLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNL-KLFILYLS 436 (986)
Q Consensus 358 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~L~~L~L~ 436 (986)
....++.++++++ .+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+ +|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 4567889999998 5666655 689999999999998888999999999999999999999888888766 59999999
Q ss_pred ccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccC-CcccccCCcccccccccchhhccCccccc
Q 046598 437 YNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSR-NQLTGSIPSEVGNLKNLEILNVFGNKLKG 515 (986)
Q Consensus 437 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 515 (986)
+|+|++..+..|..+++|++|+|++|+|+ .+|...+..+++|+.|+|++ |.++...+..|.++++|++|+|++|+++
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~- 198 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR- 198 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCccc-ccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-
Confidence 99999888888999999999999999998 77777789999999999999 5566445557999999999999999999
Q ss_pred cCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCCc-cc
Q 046598 516 EIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPTQ-GV 594 (986)
Q Consensus 516 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~ 594 (986)
.+| .+..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|++.++.. ..
T Consensus 199 ~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 277 (440)
T 3zyj_A 199 EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTP 277 (440)
T ss_dssp SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSS
T ss_pred ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcc
Confidence 566 5899999999999999999999999999999999999999999999999999999999999999999988765 56
Q ss_pred cccccceeeeCCcccccCC
Q 046598 595 FKNASITSVFGNLKLCGGI 613 (986)
Q Consensus 595 ~~~~~~~~~~~n~~lcg~~ 613 (986)
++.++.+++.+||+.|++.
T Consensus 278 l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 278 LHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CTTCCEEECCSSCEECSST
T ss_pred ccCCCEEEcCCCCccCCCC
Confidence 7888999999999999763
No 311
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=2.5e-30 Score=283.92 Aligned_cols=267 Identities=16% Similarity=0.166 Sum_probs=221.2
Q ss_pred CCCCCCCCCCCCcceeeEecCCCCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCc-cccCCcchh-------ccc
Q 046598 39 VLASWNESSHFCQWRGVTCSRRHQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSF-NHEIPSEFD-------RLR 110 (986)
Q Consensus 39 ~l~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l-~~~~p~~~~-------~l~ 110 (986)
...+|.....|+.|..+.......+++.+++++|.+ .+|..+... |+.|+|++|.+ ...+|..+. +++
T Consensus 20 ~~~~~~~~~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~ 95 (312)
T 1wwl_A 20 PKPDWSSAFNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGIS 95 (312)
T ss_dssp SSCCGGGGGGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTS
T ss_pred cccchHHHhhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcC
Confidence 356887666788887776544456788999999999 778776655 99999999999 456787776 799
Q ss_pred cCceeeceecccCCCCccch--hcCccccceecccccccCccCccccCC-----CCCCeEEccCCcCCCCcccccCCCcC
Q 046598 111 RLQVLALHYNSIGGAIPANI--SSCSNLIQLRLFHNQLVGKIPSELSSL-----SKIEHISVNDNNLTGSIPSSLGNLSS 183 (986)
Q Consensus 111 ~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~ 183 (986)
+|++|+|++|++++.+|..+ +.+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|+++++
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 99999999999999999886 8999999999999999977 8888887 99999999999999888899999999
Q ss_pred cceeeccCCcccCc--Ccchh--hccCCCceeecccccccc--cCC-ccccCCCCccEEeccccccccccCCcccccccc
Q 046598 184 IRSLFLSGNNLEGS--IPDTL--GWLKNLVNLTMAQNRLSG--TIP-SSIFNISSITGFDAGVNKIQGAIPLDYGFSLQN 256 (986)
Q Consensus 184 L~~L~L~~N~l~~~--~p~~~--~~l~~L~~L~L~~N~l~~--~~p-~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~ 256 (986)
|++|+|++|++.+. .|..+ +.+++|++|+|++|++++ .++ ..+.++++|+.|++++|.+.+..|...+..+++
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 254 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQ 254 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTT
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCC
Confidence 99999999998765 34444 889999999999999983 233 344578999999999999998887666667899
Q ss_pred cceEEecCceecccCCccccCCCCCcEEecccccccCCCchhhhhhhHhhhhhccCCC
Q 046598 257 LQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSL 314 (986)
Q Consensus 257 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l 314 (986)
|++|+|++|+++ .+|..+. ++|+.|++++|++++.+. +..+++|+.+++++|.+
T Consensus 255 L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~p~-~~~l~~L~~L~L~~N~l 308 (312)
T 1wwl_A 255 LNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRNPS-PDELPQVGNLSLKGNPF 308 (312)
T ss_dssp CCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSCCC-TTTSCEEEEEECTTCTT
T ss_pred CCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCChh-HhhCCCCCEEeccCCCC
Confidence 999999999999 7788777 899999999999998743 54444444444444433
No 312
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=6.5e-28 Score=279.44 Aligned_cols=250 Identities=23% Similarity=0.242 Sum_probs=225.6
Q ss_pred cceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccc-cccEEEec
Q 046598 358 TLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNL-KLFILYLS 436 (986)
Q Consensus 358 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~L~~L~L~ 436 (986)
....++.++++++ .+|..+. +++++|+|++|.|++..|..|..+++|++|+|++|+|++..+..|..+ +|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 3467889999998 5666554 689999999999999999999999999999999999999988888766 69999999
Q ss_pred ccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccC-CcccccCCcccccccccchhhccCccccc
Q 046598 437 YNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSR-NQLTGSIPSEVGNLKNLEILNVFGNKLKG 515 (986)
Q Consensus 437 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 515 (986)
+|+|++..+..|..+++|++|+|++|+|+ .+|...+..+++|+.|++++ |.+....+..|.++++|++|+|++|++++
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcc-eeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 99999888888999999999999999998 77777789999999999999 56665455579999999999999999995
Q ss_pred cCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCCc-cc
Q 046598 516 EIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPTQ-GV 594 (986)
Q Consensus 516 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~ 594 (986)
+| .+..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++.++.. ..
T Consensus 211 -~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 288 (452)
T 3zyi_A 211 -MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTP 288 (452)
T ss_dssp -CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTT
T ss_pred -cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcc
Confidence 45 5899999999999999999999999999999999999999999999999999999999999999999888765 56
Q ss_pred cccccceeeeCCcccccCC
Q 046598 595 FKNASITSVFGNLKLCGGI 613 (986)
Q Consensus 595 ~~~~~~~~~~~n~~lcg~~ 613 (986)
++++..+++.+||+.|++.
T Consensus 289 l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 289 LRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CTTCCEEECCSSCEECSTT
T ss_pred ccCCCEEEccCCCcCCCCC
Confidence 7888999999999999864
No 313
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.3e-28 Score=275.55 Aligned_cols=273 Identities=19% Similarity=0.159 Sum_probs=218.6
Q ss_pred ceeeccccccccCCCcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccC
Q 046598 335 KWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQR 414 (986)
Q Consensus 335 ~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 414 (986)
...+++.+.++ .+|..+. ++|++|++++|+|++..+..|.++++|++|++++|.+++..|..|.++++|++|+|++
T Consensus 34 ~~c~~~~~~l~-~iP~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (353)
T 2z80_A 34 GICKGSSGSLN-SIPSGLT---EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSY 109 (353)
T ss_dssp SEEECCSTTCS-SCCTTCC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEeeCCCCCcc-ccccccc---ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCC
Confidence 34566666666 5676554 5789999999999988777899999999999999999988888899999999999999
Q ss_pred ccceeecCcccccc-cccEEEecccccCCCCC-cccCCCCCCCeeecCCCc-cCCCCCcccccCCCcceEEEccCCcccc
Q 046598 415 NRFQGNIPPSIGNL-KLFILYLSYNFLQGSIP-SSLGRYETLTTIDLSNNN-LTGTIPPQFIGLSSSLIVLDLSRNQLTG 491 (986)
Q Consensus 415 N~l~~~~~~~~~~~-~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~-l~~~ip~~~~~~~~~L~~L~Ls~N~l~~ 491 (986)
|++++..+..+..+ +|++|+|++|++++..+ ..|..+++|++|++++|+ +. .++...++.+++|+.|++++|++++
T Consensus 110 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~~~~~l~~L~~L~l~~n~l~~ 188 (353)
T 2z80_A 110 NYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFT-KIQRKDFAGLTFLEELEIDASDLQS 188 (353)
T ss_dssp SCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC-EECTTTTTTCCEEEEEEEEETTCCE
T ss_pred CcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcccc-ccCHHHccCCCCCCEEECCCCCcCc
Confidence 99997666656654 69999999999995444 478899999999999984 65 6655557888999999999999998
Q ss_pred cCCcccccccccchhhccCccccccCcccccCCccccEEecccccccccCCcccc---CCCCCCEEeCCCccCcc----c
Q 046598 492 SIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLS---SLRGLSVLDLSQNNLSG----K 564 (986)
Q Consensus 492 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~----~ 564 (986)
..|..+..+++|++|++++|+++...+..+..+++|++|+|++|++++..+..+. ....++.++|++|.+++ .
T Consensus 189 ~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~ 268 (353)
T 2z80_A 189 YEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQ 268 (353)
T ss_dssp ECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHH
T ss_pred cCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhh
Confidence 8889999999999999999999744334455689999999999999876655443 35678888888888875 4
Q ss_pred CchhhhcccccceeeccCCccccccCCc-cccccccceeeeCCcccccC
Q 046598 565 IPELLIRLQLVKNLNLSNNDLEGVVPTQ-GVFKNASITSVFGNLKLCGG 612 (986)
Q Consensus 565 ~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~lcg~ 612 (986)
+|+.+..+++|++|+|++|+++..++.. ..+++++.+++.+|++.|.+
T Consensus 269 l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 269 VMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp HHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred hHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 7778888888888888888888655543 56778888888888888764
No 314
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=3.3e-28 Score=268.46 Aligned_cols=226 Identities=20% Similarity=0.283 Sum_probs=190.2
Q ss_pred ccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccc-cccEEEe
Q 046598 357 TTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNL-KLFILYL 435 (986)
Q Consensus 357 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~L~~L~L 435 (986)
..++.|+|++|+++ .+|..+.++++|++|+|++|.++ .+|..|+.+++|++|+|++|+++ .+|..+..+ +|++|+|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 45677777777777 56666777777888888888777 67777777778888888887777 556666554 4777788
Q ss_pred cccccCCCCCcccCC---------CCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchh
Q 046598 436 SYNFLQGSIPSSLGR---------YETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEIL 506 (986)
Q Consensus 436 ~~N~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 506 (986)
++|++.+.+|..+.. +++|++|+|++|+++ .+|.. ++.+++|++|+|++|++++ +|..+..+++|++|
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~-l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPAS-IANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGG-GGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHh-hcCCCCCCEEEccCCCCCc-CchhhccCCCCCEE
Confidence 777777777776654 899999999999998 88887 7778899999999999995 67789999999999
Q ss_pred hccCccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccc
Q 046598 507 NVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLE 586 (986)
Q Consensus 507 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 586 (986)
+|++|++.+.+|..|+.+++|++|+|++|++.+.+|..+..+++|+.|+|++|++.+.+|..+.++++|+.+++..|.+.
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988776
Q ss_pred cc
Q 046598 587 GV 588 (986)
Q Consensus 587 ~~ 588 (986)
..
T Consensus 315 ~l 316 (328)
T 4fcg_A 315 QL 316 (328)
T ss_dssp C-
T ss_pred HH
Confidence 43
No 315
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=1.1e-30 Score=314.69 Aligned_cols=330 Identities=14% Similarity=0.074 Sum_probs=223.7
Q ss_pred ccCCCceeeccccccccc----CCccccCCCCccEEecccccccc----ccCCcccccccccceEEecCceecccCCccc
Q 046598 204 WLKNLVNLTMAQNRLSGT----IPSSIFNISSITGFDAGVNKIQG----AIPLDYGFSLQNLQFFSVGENQLTGAIPPTI 275 (986)
Q Consensus 204 ~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~l~~N~l~~----~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l 275 (986)
.+++|++|+|++|.+++. ++..+.++++|+.|+++.|.+.+ .++ .+..++++|+.|++++|.+.+ +|..+
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~-~~~~~~~~L~~L~L~~~~~~~-l~~~~ 239 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLE-TIARNCRSLVSVKVGDFEILE-LVGFF 239 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHH-HHHHHCTTCCEEECSSCBGGG-GHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHH-HHHhhCCCCcEEeccCccHHH-HHHHH
Confidence 344444555544444333 22223344445555555554431 111 122356778888888888775 66778
Q ss_pred cCCCCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCCCcccccc
Q 046598 276 SNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSLPACISNL 355 (986)
Q Consensus 276 ~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~ 355 (986)
..+++|+.|+++......... ..+..+..+
T Consensus 240 ~~~~~L~~L~l~~~~~~~~~~--------------------------------------------------~~~~~l~~~ 269 (592)
T 3ogk_B 240 KAAANLEEFCGGSLNEDIGMP--------------------------------------------------EKYMNLVFP 269 (592)
T ss_dssp HHCTTCCEEEECBCCCCTTCT--------------------------------------------------TSSSCCCCC
T ss_pred hhhhHHHhhcccccccccchH--------------------------------------------------HHHHHhhcc
Confidence 888888888887522110000 011111111
Q ss_pred cccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCC-CcccCCCCCCEEEccCcccee-ecCccccc-ccccE
Q 046598 356 STTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIP-PAIGELQNLKDLRLQRNRFQG-NIPPSIGN-LKLFI 432 (986)
Q Consensus 356 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~-~~L~~ 432 (986)
.+|+.|.++++.. +.+|..+..+++|++|+|++|.+++... ..+..+++|++|+++ |.+.. .++..... .+|++
T Consensus 270 -~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~ 346 (592)
T 3ogk_B 270 -RKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKR 346 (592)
T ss_dssp -TTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCE
T ss_pred -ccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCE
Confidence 4567777777543 3677788899999999999999875443 346889999999999 44443 33333333 35999
Q ss_pred EEec-----------ccccCCCCC-cccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEcc----CCccccc----
Q 046598 433 LYLS-----------YNFLQGSIP-SSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLS----RNQLTGS---- 492 (986)
Q Consensus 433 L~L~-----------~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls----~N~l~~~---- 492 (986)
|+++ .|.+++... ..+..+++|++|+++.|++++..+..+...+++|+.|+++ .|++++.
T Consensus 347 L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~ 426 (592)
T 3ogk_B 347 LRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDN 426 (592)
T ss_dssp EEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHH
T ss_pred EEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHH
Confidence 9999 466664422 2245589999999999999876665544447899999996 7888853
Q ss_pred -CCcccccccccchhhccCc--cccccCcccccC-CccccEEecccccccc-cCCccccCCCCCCEEeCCCccCccc-Cc
Q 046598 493 -IPSEVGNLKNLEILNVFGN--KLKGEIPSTLGS-CIKLEQLEMQENFLQG-PIPSSLSSLRGLSVLDLSQNNLSGK-IP 566 (986)
Q Consensus 493 -~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~~-l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p 566 (986)
++..+.++++|+.|+|++| .+++..+..+.. +++|++|+|++|++++ .++..+..+++|+.|+|++|++++. ++
T Consensus 427 ~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 506 (592)
T 3ogk_B 427 GVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIA 506 (592)
T ss_dssp HHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHH
T ss_pred HHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHH
Confidence 3344677999999999854 477666655554 8999999999999986 3455668899999999999999865 45
Q ss_pred hhhhcccccceeeccCCccccc
Q 046598 567 ELLIRLQLVKNLNLSNNDLEGV 588 (986)
Q Consensus 567 ~~~~~l~~L~~l~ls~N~l~~~ 588 (986)
..+..+++|++|+|++|+++..
T Consensus 507 ~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 507 AAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHHhcCccCeeECcCCcCCHH
Confidence 5567899999999999998865
No 316
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.1e-27 Score=259.53 Aligned_cols=252 Identities=21% Similarity=0.201 Sum_probs=221.0
Q ss_pred ceeeccccccccCCCcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccC
Q 046598 335 KWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQR 414 (986)
Q Consensus 335 ~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 414 (986)
+.++.+.+.++ .+|..+ +++++.|++++|+|++..+..|..+++|++|++++|.+++..|..|..+++|++|+|++
T Consensus 14 ~~~~c~~~~l~-~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS-SCCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc-cCCcCC---CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 45666666665 466544 36899999999999998889999999999999999999988899999999999999999
Q ss_pred cc-ceeecCcccccc-cccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCccccc
Q 046598 415 NR-FQGNIPPSIGNL-KLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGS 492 (986)
Q Consensus 415 N~-l~~~~~~~~~~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~ 492 (986)
|+ +....|..+..+ +|++|++++|.+++..|..|..+++|++|++++|+++ .++...++.+++|+.|+|++|++++.
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~ 168 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSV 168 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccc-ccCHhHhccCCCccEEECCCCccccc
Confidence 98 887778888765 6999999999999988999999999999999999998 66666688899999999999999976
Q ss_pred CCcccccccccchhhccCccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcc
Q 046598 493 IPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRL 572 (986)
Q Consensus 493 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 572 (986)
.+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|+.|+|++|+++...+.. .-.
T Consensus 169 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~ 247 (285)
T 1ozn_A 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLW 247 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHH
T ss_pred CHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHH
Confidence 6677999999999999999999888999999999999999999999877788999999999999999998644432 223
Q ss_pred cccceeeccCCccccccCCc
Q 046598 573 QLVKNLNLSNNDLEGVVPTQ 592 (986)
Q Consensus 573 ~~L~~l~ls~N~l~~~~p~~ 592 (986)
..++.+..+.|.+.+..|..
T Consensus 248 ~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 248 AWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp HHHHHCCSEECCCBEEESGG
T ss_pred HHHHhcccccCccccCCchH
Confidence 45667778899999998875
No 317
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.3e-26 Score=274.78 Aligned_cols=108 Identities=31% Similarity=0.355 Sum_probs=68.5
Q ss_pred CCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccccEEe
Q 046598 452 ETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLE 531 (986)
Q Consensus 452 ~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 531 (986)
++|+.|++++|+++ .+|.. +++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+
T Consensus 201 ~~L~~L~L~~N~l~-~l~~~----~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~ 267 (622)
T 3g06_A 201 SELYKLWAYNNRLT-SLPAL----PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLS 267 (622)
T ss_dssp TTCCEEECCSSCCS-SCCCC----CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEE
T ss_pred chhhEEECcCCccc-ccCCC----CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEe
Confidence 45666666666666 45532 3556667777776664 44 33456666666666666 3444 456666777
Q ss_pred cccccccccCCccccCCCCCCEEeCCCccCcccCchhhhccc
Q 046598 532 MQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQ 573 (986)
Q Consensus 532 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 573 (986)
|++|+|+ .+|..+.++++|+.|+|++|++++.+|..+..++
T Consensus 268 Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 268 VYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 7777776 5566677777777777777777766666666554
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.7e-28 Score=270.08 Aligned_cols=222 Identities=19% Similarity=0.207 Sum_probs=164.2
Q ss_pred cceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccccccEEEecc
Q 046598 358 TLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSY 437 (986)
Q Consensus 358 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~ 437 (986)
+|+.|+|++|++++..+ +..+++|++|++++|.+++.. ..++|++|++++|++++..+..+ .+|++|++++
T Consensus 59 ~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~~--~~L~~L~l~~ 129 (317)
T 3o53_A 59 KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCSRG--QGKKNIYLAN 129 (317)
T ss_dssp TCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEECCC--SSCEEEECCS
T ss_pred cCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCcccc--CCCCEEECCC
Confidence 44555555555554333 666777777777777776432 23677777777777776665543 2477888888
Q ss_pred cccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccC
Q 046598 438 NFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEI 517 (986)
Q Consensus 438 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 517 (986)
|++++..+..+..+++|++|+|++|++++..+..++..+++|++|+|++|+|++. |. ...+++|++|+|++|++++ +
T Consensus 130 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l 206 (317)
T 3o53_A 130 NKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-M 206 (317)
T ss_dssp SCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-E
T ss_pred CCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCc-c
Confidence 8888777778888888888888888888555565555678888888888888854 33 3357888888888888884 5
Q ss_pred cccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCc-ccCchhhhcccccceeecc-CCccccccCCc
Q 046598 518 PSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLS-GKIPELLIRLQLVKNLNLS-NNDLEGVVPTQ 592 (986)
Q Consensus 518 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~l~ls-~N~l~~~~p~~ 592 (986)
|..+..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|+++ .+.++|..|..
T Consensus 207 ~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 207 GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp CGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred hhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhc
Confidence 555888888888888888888 46777888888888888888888 7788888888888888888 55677766654
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=5.1e-28 Score=266.16 Aligned_cols=157 Identities=22% Similarity=0.248 Sum_probs=85.6
Q ss_pred cceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCccc-CCCCCCEEEccCccceeecCcccccccccEEEec
Q 046598 358 TLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIG-ELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLS 436 (986)
Q Consensus 358 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~ 436 (986)
+|+.|++++|++++..+..+..+++|++|++++|.+++..+..+. .+++|++|+|++|+|++. +..
T Consensus 121 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~------------ 187 (317)
T 3o53_A 121 GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQ------------ 187 (317)
T ss_dssp SCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECC------------
T ss_pred CCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccc------------
Confidence 355666666666655566666667777777777777665555553 566666666666666643 111
Q ss_pred ccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCcccc-c
Q 046598 437 YNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLK-G 515 (986)
Q Consensus 437 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~ 515 (986)
..+++|++|+|++|+|+ .+|+. +..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+. +
T Consensus 188 ------------~~l~~L~~L~Ls~N~l~-~l~~~-~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 188 ------------VVFAKLKTLDLSSNKLA-FMGPE-FQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp ------------CCCTTCCEEECCSSCCC-EECGG-GGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHH
T ss_pred ------------cccccCCEEECCCCcCC-cchhh-hcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCc
Confidence 12444555555555554 33333 334455555555555555 34444555555555555555555 4
Q ss_pred cCcccccCCccccEEecc-cccccccCC
Q 046598 516 EIPSTLGSCIKLEQLEMQ-ENFLQGPIP 542 (986)
Q Consensus 516 ~~p~~~~~l~~L~~L~L~-~N~l~~~~p 542 (986)
.+|..+..+++|+.|+++ .+.+++..|
T Consensus 253 ~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 253 TLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred CHHHHHhccccceEEECCCchhccCCch
Confidence 455555555555555555 333444333
No 320
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1.5e-28 Score=289.79 Aligned_cols=185 Identities=17% Similarity=0.034 Sum_probs=129.2
Q ss_pred cccccceeEEEEEECCCCeEEEEEEeeccC----------chhHHHHHHHHHHHhcC-CCCcceeeeeeccccccCCCce
Q 046598 696 IGEGSFGSVFKGILDDGRTTIAVKVFNLLH----------HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 696 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 764 (986)
.+.|+.|.+..++..-.++.||+|++.... ....+++.+|+++|+++ .|+||++++++ ++++..
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~-----~ed~~~ 316 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAH-----GENAQS 316 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEE-----EECSSE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEE-----EEECCE
Confidence 455666666666655557889999996421 22346799999999999 79999999999 677899
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEE
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHI 844 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 844 (986)
.||||||++|++|.+++.. .++++.. +|+.||+.||+|+|++ |||||||||+|||++++|.+||
T Consensus 317 ~yLVMEyv~G~~L~d~i~~----------~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL 380 (569)
T 4azs_A 317 GWLVMEKLPGRLLSDMLAA----------GEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARL 380 (569)
T ss_dssp EEEEEECCCSEEHHHHHHT----------TCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHHh----------CCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEE
Confidence 9999999999999999953 2345543 5899999999999999 9999999999999999999999
Q ss_pred cccccceecCCCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCC
Q 046598 845 GDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKP 904 (986)
Q Consensus 845 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~p 904 (986)
+|||+|+...... ......+||+.|||||++.+ .+..++|+||+|++.+++.++..+
T Consensus 381 ~DFGlAr~~~~~~--~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 381 IDFGSIVTTPQDC--SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp CCCTTEESCC-----CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred eecccCeeCCCCC--ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 9999998764332 22345679999999999876 467889999999998887665444
No 321
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=7.9e-27 Score=250.41 Aligned_cols=220 Identities=20% Similarity=0.265 Sum_probs=175.3
Q ss_pred CCCCcceeeEecCCCCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCC
Q 046598 47 SHFCQWRGVTCSRRHQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAI 126 (986)
Q Consensus 47 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 126 (986)
.++|.|.|+.|+... .++.+|+++++++ .+|..+. +.|++|+|++|++++..+.+|.++++|++|+|++|+++...
T Consensus 2 ~~~C~~~~~~C~c~~-~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCNN-NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEET-TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeCC-CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 478999999886532 3567999999998 5776665 67999999999999877788999999999999999999666
Q ss_pred ccchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccC
Q 046598 127 PANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLK 206 (986)
Q Consensus 127 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 206 (986)
+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|+++++|++|+|++|++++..+..|..++
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCc
Confidence 66778899999999999999977777888999999999999999988888888999999999999999876667788889
Q ss_pred CCceeecccccccccCCccccCCCCccEEeccccccccccCCcccccccccceEEecCceecccCCccccCCCCCcEEec
Q 046598 207 NLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASNLEIFHG 286 (986)
Q Consensus 207 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l 286 (986)
+|++|+|++|++++..+..+.+++ +|++|++++|++++..+..|..+++|+.|++
T Consensus 158 ~L~~L~L~~n~l~~~~~~~~~~l~-------------------------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 212 (270)
T 2o6q_A 158 SLKELRLYNNQLKRVPEGAFDKLT-------------------------ELKTLKLDNNQLKRVPEGAFDSLEKLKMLQL 212 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCT-------------------------TCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred ccceeEecCCcCcEeChhHhccCC-------------------------CcCEEECCCCcCCcCCHHHhccccCCCEEEe
Confidence 999999999988865555555544 4555555555555555555667777777777
Q ss_pred ccccccCCC
Q 046598 287 SVNKLTGAA 295 (986)
Q Consensus 287 s~N~l~~~~ 295 (986)
++|.+....
T Consensus 213 ~~N~~~c~c 221 (270)
T 2o6q_A 213 QENPWDCTC 221 (270)
T ss_dssp CSSCBCCSS
T ss_pred cCCCeeCCC
Confidence 777775543
No 322
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=9.2e-30 Score=306.66 Aligned_cols=455 Identities=15% Similarity=0.131 Sum_probs=257.9
Q ss_pred CCCcceeeEecCCCCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccc---cCC------------cchhccccC
Q 046598 48 HFCQWRGVTCSRRHQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNH---EIP------------SEFDRLRRL 112 (986)
Q Consensus 48 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~---~~p------------~~~~~l~~L 112 (986)
-|++|+++... ....++++..... .....+..++.|+.|+|+++.... ..| ..+..+++|
T Consensus 33 vck~W~~~~~~----~~~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 33 VCKSWYEIERW----CRRKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp SCHHHHHHHHH----HCCEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHHhhhh----hceEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 35589998321 2234555543321 112335677889999999875321 122 224567788
Q ss_pred ceeeceecccCCCCccchh-cCccccceecccc-cccCc-cCccccCCCCCCeEEccCCcCCCCcccccC----CCcCcc
Q 046598 113 QVLALHYNSIGGAIPANIS-SCSNLIQLRLFHN-QLVGK-IPSELSSLSKIEHISVNDNNLTGSIPSSLG----NLSSIR 185 (986)
Q Consensus 113 ~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l~~L~ 185 (986)
++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|+
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~ 187 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCc
Confidence 8888888888876666665 6888888888888 44432 444455788888888888887765544443 566888
Q ss_pred eeeccCCc--ccC-cCcchhhccCCCceeecccc-cccccCCccccCCCCccEEeccccccccccCCcccccccccceEE
Q 046598 186 SLFLSGNN--LEG-SIPDTLGWLKNLVNLTMAQN-RLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFS 261 (986)
Q Consensus 186 ~L~L~~N~--l~~-~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~ 261 (986)
+|+|++|. ++. .++..+..+++|++|+|++| .++ .+|..+.++++|+.|+++.+.. +
T Consensus 188 ~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~------------------~ 248 (594)
T 2p1m_B 188 SLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTA------------------E 248 (594)
T ss_dssp EEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCC------------------C
T ss_pred EEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccC------------------c
Confidence 88888886 221 11122244578888888877 344 3666666666666666543321 1
Q ss_pred ecCceecccCCccccCCCCCcEEe-cccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeecc
Q 046598 262 VGENQLTGAIPPTISNASNLEIFH-GSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLIN 340 (986)
Q Consensus 262 L~~N~l~~~~p~~l~~l~~L~~L~-ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~ 340 (986)
++.|.+.+ ++..+.++++|+.+. +......
T Consensus 249 ~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~~------------------------------------------------ 279 (594)
T 2p1m_B 249 VRPDVYSG-LSVALSGCKELRCLSGFWDAVPA------------------------------------------------ 279 (594)
T ss_dssp CCHHHHHH-HHHHHHTCTTCCEEECCBTCCGG------------------------------------------------
T ss_pred cchhhHHH-HHHHHhcCCCcccccCCcccchh------------------------------------------------
Confidence 22333443 233555666666552 2111110
Q ss_pred ccccccCCCcccccccccceEEEccCCcccccCC-ccccCCCCCCEEEccCccccCc-CCCcccCCCCCCEEEccC----
Q 046598 341 INNFGGSLPACISNLSTTLEVLLLDNNQIFGNIP-AAIGKFVNLQRLDMCSNRLSGT-IPPAIGELQNLKDLRLQR---- 414 (986)
Q Consensus 341 ~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~---- 414 (986)
.+|..+.. .++|+.|++++|.+++... ..+..+++|++|++++| ++.. ++.....+++|++|+|++
T Consensus 280 ------~l~~~~~~-~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~ 351 (594)
T 2p1m_B 280 ------YLPAVYSV-CSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPF 351 (594)
T ss_dssp ------GGGGGHHH-HTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTT
T ss_pred ------hHHHHHHh-hCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCccc
Confidence 11111111 1456666666666543322 22456677777777776 3322 222223467777777733
Q ss_pred -----ccceeecCcccc--cccccEEEecccccCCCCCcccC-CCCCCCeeecC--C----CccCCCCCc-----ccccC
Q 046598 415 -----NRFQGNIPPSIG--NLKLFILYLSYNFLQGSIPSSLG-RYETLTTIDLS--N----NNLTGTIPP-----QFIGL 475 (986)
Q Consensus 415 -----N~l~~~~~~~~~--~~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~--~----N~l~~~ip~-----~~~~~ 475 (986)
|.+++.....+. ..+|++|.++.|.+++..+..+. .+++|+.|+++ + |.++ ..|. ..+..
T Consensus 352 g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~-~~~~~~~~~~l~~~ 430 (594)
T 2p1m_B 352 VMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLT-LEPLDIGFGAIVEH 430 (594)
T ss_dssp CSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTT-CCCTHHHHHHHHHH
T ss_pred ccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccccc-CCchhhHHHHHHhh
Confidence 344432222211 22466666666666654444443 36677777777 3 4554 2221 11344
Q ss_pred CCcceEEEccCCcccccCCccccc-ccccchhhccCccccccCcccc-cCCccccEEecccccccccCCc-cccCCCCCC
Q 046598 476 SSSLIVLDLSRNQLTGSIPSEVGN-LKNLEILNVFGNKLKGEIPSTL-GSCIKLEQLEMQENFLQGPIPS-SLSSLRGLS 552 (986)
Q Consensus 476 ~~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~ 552 (986)
+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|++|+|++|.+++..+. .+..+++|+
T Consensus 431 ~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~ 509 (594)
T 2p1m_B 431 CKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMR 509 (594)
T ss_dssp CTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSS
T ss_pred CCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCC
Confidence 56777777766 555544444444 6677777777777765544444 5577777777777777544333 334467777
Q ss_pred EEeCCCccCcccCchhh-hcccccceeeccCCcc
Q 046598 553 VLDLSQNNLSGKIPELL-IRLQLVKNLNLSNNDL 585 (986)
Q Consensus 553 ~L~Ls~N~l~~~~p~~~-~~l~~L~~l~ls~N~l 585 (986)
.|+|++|+++......+ ..++.|+...+..+.-
T Consensus 510 ~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 510 SLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp EEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred EEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 77777777754333334 4456666655655543
No 323
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.1e-26 Score=270.42 Aligned_cols=247 Identities=20% Similarity=0.206 Sum_probs=215.7
Q ss_pred cccccceeeccccccccCCCcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCE
Q 046598 330 NATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKD 409 (986)
Q Consensus 330 ~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 409 (986)
.+++|+.|++++|.+++..|..+..+ ++|++|+|++|.|++..| |..+++|++|+|++|.|++..+ .++|+.
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~ 103 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPF-TKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIET 103 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTC-TTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCC-CCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCE
Confidence 45588999999999998777777666 689999999999997766 9999999999999999995443 389999
Q ss_pred EEccCccceeecCcccccccccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcc
Q 046598 410 LRLQRNRFQGNIPPSIGNLKLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQL 489 (986)
Q Consensus 410 L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l 489 (986)
|++++|.|++..+..+ .+|++|+|++|.+++..|..|+.+++|++|+|++|+|++.+|..+...+++|+.|+|++|.|
T Consensus 104 L~L~~N~l~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 104 LHAANNNISRVSCSRG--QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp EECCSSCCCCEEECCC--SSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred EECcCCcCCCCCcccc--CCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 9999999998877655 36999999999999999999999999999999999999878877666789999999999999
Q ss_pred cccCCcccccccccchhhccCccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCc-ccCchh
Q 046598 490 TGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLS-GKIPEL 568 (986)
Q Consensus 490 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~ 568 (986)
++. | .+..+++|+.|+|++|+|++ +|..+..+++|+.|+|++|.|++ +|..+..+++|+.|+|++|+++ +.+|..
T Consensus 182 ~~~-~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~ 257 (487)
T 3oja_A 182 YDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (487)
T ss_dssp CEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHH
T ss_pred ccc-c-ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHH
Confidence 975 3 34469999999999999996 45569999999999999999995 7888999999999999999998 788899
Q ss_pred hhcccccceeecc-------CCccccccC
Q 046598 569 LIRLQLVKNLNLS-------NNDLEGVVP 590 (986)
Q Consensus 569 ~~~l~~L~~l~ls-------~N~l~~~~p 590 (986)
+..++.|+.++++ .|+..+..+
T Consensus 258 ~~~l~~L~~l~~~~~~~~~~~~~~~c~~~ 286 (487)
T 3oja_A 258 FSKNQRVQTVAKQTVKKLTGQNEEECTVP 286 (487)
T ss_dssp HTTCHHHHHHHHHHHHHHTSSSSCCCSST
T ss_pred HHhCCCCcEEeccccccccCCCcccccCC
Confidence 9999999999997 555554443
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=2e-25 Score=240.58 Aligned_cols=209 Identities=22% Similarity=0.233 Sum_probs=142.3
Q ss_pred CCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccc-cccEEEecccccCCCCCcccCCCCCCCeeecC
Q 046598 382 NLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNL-KLFILYLSYNFLQGSIPSSLGRYETLTTIDLS 460 (986)
Q Consensus 382 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 460 (986)
+|++|++++|.+++..+..|..+++|++|+|++|++++..+..+..+ +|++|+|++|.+++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 44455555555544444444445555555555555544444444332 35555555555555556667777777777777
Q ss_pred CCccCCCCCcccccCCCcceEEEccCCccccc-CCcccccccccchhhccCccccccCcccccCCcccc----EEecccc
Q 046598 461 NNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGS-IPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLE----QLEMQEN 535 (986)
Q Consensus 461 ~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~L~~N 535 (986)
+|+++ .++...++.+++|++|++++|++++. +|..|..+++|++|+|++|++++..+..+..+++|+ +|++++|
T Consensus 109 ~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 109 ETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TSCCC-CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCcc-ccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 77777 44443366777788888888877753 477788888888888888888876667777766666 8888899
Q ss_pred cccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCCc
Q 046598 536 FLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPTQ 592 (986)
Q Consensus 536 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~ 592 (986)
.+++..+..+.. .+|+.|+|++|+|++..+..+..+++|++|+|++|+++|..|..
T Consensus 188 ~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 188 PMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred cccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 888655555544 48999999999998777777888999999999999999887754
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=4e-25 Score=238.12 Aligned_cols=221 Identities=20% Similarity=0.226 Sum_probs=190.2
Q ss_pred ccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccC
Q 046598 77 SISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSS 156 (986)
Q Consensus 77 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 156 (986)
.+|..+. +.|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|.+
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 4555543 57899999999999888889999999999999999999777788999999999999999999888889999
Q ss_pred CCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCc-CcchhhccCCCceeecccccccccCCccccCCCCcc--
Q 046598 157 LSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGS-IPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSIT-- 233 (986)
Q Consensus 157 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~-- 233 (986)
+++|++|++++|++++..+..++++++|++|+|++|++++. +|..|+.+++|++|+|++|++++..+..+..+.+|+
T Consensus 99 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l 178 (276)
T 2z62_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178 (276)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTC
T ss_pred CccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcccc
Confidence 99999999999999987777899999999999999999864 589999999999999999999987778888777777
Q ss_pred --EEeccccccccccCCcccccccccceEEecCceecccCCccccCCCCCcEEecccccccCCCchhhhh
Q 046598 234 --GFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLTGAAPYLEKL 301 (986)
Q Consensus 234 --~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~l~~l 301 (986)
.|++++|.+.+..+ ..+ ...+|+.|++++|++++..+..|..+++|+.|++++|.++...+.+..+
T Consensus 179 ~l~L~ls~n~l~~~~~-~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l~~l 246 (276)
T 2z62_A 179 NLSLDLSLNPMNFIQP-GAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL 246 (276)
T ss_dssp CEEEECCSSCCCEECT-TSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTTHHH
T ss_pred ceeeecCCCcccccCc-ccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCchHHH
Confidence 89999999985444 333 2458999999999999887778899999999999999999776654444
No 326
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=1.6e-28 Score=295.94 Aligned_cols=213 Identities=15% Similarity=0.093 Sum_probs=149.1
Q ss_pred cCCccccCCCCCCEEEccCccccCcCCC-cccCCCCCCEEEccCccceee-cCcccc-cccccEEEecc---------cc
Q 046598 372 NIPAAIGKFVNLQRLDMCSNRLSGTIPP-AIGELQNLKDLRLQRNRFQGN-IPPSIG-NLKLFILYLSY---------NF 439 (986)
Q Consensus 372 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~-~~~~~~-~~~L~~L~L~~---------N~ 439 (986)
.++..+..+++|++|+|++|.+++.... .+..+++|++|++++| +... ++.... ..+|++|+++. |.
T Consensus 280 ~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~ 358 (594)
T 2p1m_B 280 YLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVA 358 (594)
T ss_dssp GGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSC
T ss_pred hHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCC
Confidence 3455556789999999999998743322 3568899999999988 4422 222222 23689998843 45
Q ss_pred cCCCCCcccC-CCCCCCeeecCCCccCCCCCcccccCCCcceEEEcc--C----Cccccc-----CCcccccccccchhh
Q 046598 440 LQGSIPSSLG-RYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLS--R----NQLTGS-----IPSEVGNLKNLEILN 507 (986)
Q Consensus 440 l~~~~p~~~~-~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls--~----N~l~~~-----~p~~~~~l~~L~~L~ 507 (986)
+++.....+. .+++|+.|+++.|++++..+..+...+++|+.|+++ + |.+++. ++..+..+++|+.|+
T Consensus 359 l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~ 438 (594)
T 2p1m_B 359 LTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLS 438 (594)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEE
T ss_pred CCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEe
Confidence 5543333333 378899998888888755444433457889999998 4 566621 122256678899999
Q ss_pred ccCccccccCcccccC-CccccEEecccccccccCCccc-cCCCCCCEEeCCCccCcccCch-hhhcccccceeeccCCc
Q 046598 508 VFGNKLKGEIPSTLGS-CIKLEQLEMQENFLQGPIPSSL-SSLRGLSVLDLSQNNLSGKIPE-LLIRLQLVKNLNLSNND 584 (986)
Q Consensus 508 Ls~N~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~l~ls~N~ 584 (986)
|++ .+++..+..++. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++.... .+..+++|++|++++|+
T Consensus 439 L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 439 LSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp CCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred ecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 977 677666666665 8889999999999876655555 6688999999999998655444 44558899999999998
Q ss_pred cc
Q 046598 585 LE 586 (986)
Q Consensus 585 l~ 586 (986)
++
T Consensus 518 ~~ 519 (594)
T 2p1m_B 518 VS 519 (594)
T ss_dssp CB
T ss_pred CC
Confidence 84
No 327
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=3.3e-24 Score=229.96 Aligned_cols=206 Identities=24% Similarity=0.286 Sum_probs=149.9
Q ss_pred cceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccccccEEEecc
Q 046598 358 TLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSY 437 (986)
Q Consensus 358 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~ 437 (986)
..+.+++++++++ .+|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|+++.
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~------------------ 75 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT------------------ 75 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSC------------------
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCe------------------
Confidence 4567777777777 3554443 567777777777776666677777777777666666652
Q ss_pred cccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccC
Q 046598 438 NFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEI 517 (986)
Q Consensus 438 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 517 (986)
..+..|..+++|++|++++|+++ .+|...+..+++|++|++++|++++..+..|..+++|++|+|++|++++..
T Consensus 76 -----i~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 149 (270)
T 2o6q_A 76 -----LPAGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLP 149 (270)
T ss_dssp -----CCTTTTSSCTTCCEEECCSSCCC-CCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred -----eChhhhcCCCCCCEEECCCCcCC-cCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccC
Confidence 33444566777777777777776 555555667777777777777777666666777788888888888887655
Q ss_pred cccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccC
Q 046598 518 PSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVP 590 (986)
Q Consensus 518 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 590 (986)
+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|++.+..+
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 5667778888888888888887666677888888888888888887666677778888888888888877655
No 328
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.92 E-value=8.4e-25 Score=231.85 Aligned_cols=192 Identities=19% Similarity=0.243 Sum_probs=170.5
Q ss_pred CCCcceeeEecCCCCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCc
Q 046598 48 HFCQWRGVTCSRRHQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIP 127 (986)
Q Consensus 48 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 127 (986)
+||.|.|++|... ...+|+++++++ .+|..+. +.|+.|+|++|++.+..+..|.++++|++|+|++|++++..|
T Consensus 3 ~Cp~~~gC~C~~~---~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNEG---KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEGG---GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCCC---CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 5889999999643 346889999988 6777665 689999999999999999999999999999999999998888
Q ss_pred cchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCC
Q 046598 128 ANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKN 207 (986)
Q Consensus 128 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 207 (986)
..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|+.+++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 156 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcC
Confidence 88999999999999999999888888999999999999999999888888899999999999999999777778999999
Q ss_pred CceeecccccccccCCccccCCCCccEEeccccccccc
Q 046598 208 LVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGA 245 (986)
Q Consensus 208 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~ 245 (986)
|++|+|++|++++..+..+..+++|+.|++++|.+...
T Consensus 157 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 157 LQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999999999977777888888888888888887654
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.1e-24 Score=235.79 Aligned_cols=205 Identities=27% Similarity=0.288 Sum_probs=105.7
Q ss_pred ccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccccccEEEecccccCCCCCcccCCCCCCCe
Q 046598 377 IGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSYNFLQGSIPSSLGRYETLTT 456 (986)
Q Consensus 377 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 456 (986)
+.++++++++++++|.++ .+|..+. ++++.|+|++|+|++..+.. |..+++|++
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~-----------------------~~~l~~L~~ 59 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLAT-----------------------LMPYTRLTQ 59 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGG-----------------------GTTCTTCCE
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHH-----------------------hhcCCCCCE
Confidence 556677777777777776 4454443 45666666666666544444 444444555
Q ss_pred eecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccccEEeccccc
Q 046598 457 IDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENF 536 (986)
Q Consensus 457 L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 536 (986)
|+|++|+|+ .++.. +.+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..|..|..+++|++|+|++|+
T Consensus 60 L~L~~n~l~-~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 60 LNLDRAELT-KLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (290)
T ss_dssp EECTTSCCC-EEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred EECCCCccC-cccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCC
Confidence 555555544 22221 33444555555555554 344444455555555555555554444445555555555555555
Q ss_pred ccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCCccccccccceeeeCCccccc
Q 046598 537 LQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPTQGVFKNASITSVFGNLKLCG 611 (986)
Q Consensus 537 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lcg 611 (986)
|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|+..++.......+..+.+.||||.|+
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCc
Confidence 554444444555555555555555554444444455555555555555554433333334444555555555554
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=4.7e-24 Score=230.67 Aligned_cols=203 Identities=26% Similarity=0.266 Sum_probs=140.5
Q ss_pred cccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccccccEEEe
Q 046598 356 STTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYL 435 (986)
Q Consensus 356 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L 435 (986)
.++++.+++++|+++ .+|..+. ++++.|+|++|.+++..+..|..+++|++|+|++|+|++..+.
T Consensus 9 l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~------------ 73 (290)
T 1p9a_G 9 VASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD------------ 73 (290)
T ss_dssp STTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC------------
T ss_pred cCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC------------
Confidence 367899999999999 4555554 6899999999999988889999999999999999998854321
Q ss_pred cccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccc
Q 046598 436 SYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKG 515 (986)
Q Consensus 436 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 515 (986)
+.+++|++|+|++|+|+ .+|.. +..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++
T Consensus 74 -------------~~l~~L~~L~Ls~N~l~-~l~~~-~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ 138 (290)
T 1p9a_G 74 -------------GTLPVLGTLDLSHNQLQ-SLPLL-GQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT 138 (290)
T ss_dssp -------------SCCTTCCEEECCSSCCS-SCCCC-TTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCC
T ss_pred -------------CCCCcCCEEECCCCcCC-cCchh-hccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCc
Confidence 34455666666666665 55544 4455566666666666665445556666666666666666665
Q ss_pred cCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCcccccc
Q 046598 516 EIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVV 589 (986)
Q Consensus 516 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 589 (986)
..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|++.+..
T Consensus 139 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 139 LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred cChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 55555666666666666666666555555566667777777777766 45666666666777777777766543
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.5e-24 Score=232.78 Aligned_cols=220 Identities=20% Similarity=0.217 Sum_probs=178.8
Q ss_pred ceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCccccc-ccccEEEecc
Q 046598 359 LEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGN-LKLFILYLSY 437 (986)
Q Consensus 359 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-~~L~~L~L~~ 437 (986)
+..+.+.++.+.+. ..+..+++|+.|++++|.++. ...+..+++|++|+|++|++++. + .+.. .+|++|+|++
T Consensus 21 l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~--~~~l~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~L~~ 94 (272)
T 3rfs_A 21 TIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLHDI-S-ALKELTNLTYLILTG 94 (272)
T ss_dssp HHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC--CTTGGGCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECTT
T ss_pred HHHHHhcCcccccc--cccccccceeeeeeCCCCccc--ccccccCCCCcEEECCCCCCCCc-h-hhcCCCCCCEEECCC
Confidence 34455556655533 335667778888888888762 23577788888888888887753 3 3333 3588888888
Q ss_pred cccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccC
Q 046598 438 NFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEI 517 (986)
Q Consensus 438 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 517 (986)
|.+++..+..|..+++|++|++++|+++ .+|...++.+++|++|++++|++++..+..|..+++|+.|+|++|++++..
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 173 (272)
T 3rfs_A 95 NQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLP 173 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CccCccChhHhcCCcCCCEEECCCCcCC-ccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccC
Confidence 8888788888899999999999999998 566666788899999999999999777777899999999999999999877
Q ss_pred cccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCCc
Q 046598 518 PSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPTQ 592 (986)
Q Consensus 518 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~ 592 (986)
+..|+.+++|++|+|++|++++..|..+..+++|+.|+|++|++++. ++.|+.|+++.|.++|.+|..
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 174 EGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCT
T ss_pred HHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCc
Confidence 77889999999999999999988888899999999999999999865 446888999999999999976
No 332
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=5.2e-24 Score=228.60 Aligned_cols=206 Identities=18% Similarity=0.190 Sum_probs=168.3
Q ss_pred eEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceecc
Q 046598 63 RVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLF 142 (986)
Q Consensus 63 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 142 (986)
+++.++++++.+.. .+.++.+++|++|+|++|.+.+. ..+..+++|++|+|++|++++..|..|+.+++|++|+|+
T Consensus 42 ~L~~L~l~~~~i~~--~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 117 (272)
T 3rfs_A 42 SIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLV 117 (272)
T ss_dssp TCCEEECTTSCCCC--CTTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred ceeeeeeCCCCccc--ccccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECC
Confidence 47778888887763 24578888888888888888753 478888888888888888887777778888888888888
Q ss_pred cccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceeecccccccccC
Q 046598 143 HNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTI 222 (986)
Q Consensus 143 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 222 (986)
+|++++..+..|+++++|++|+|++|++++..+..|+++++|++|+|++|++++..+..|+.+++|++|+|++|++++..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (272)
T 3rfs_A 118 ENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVP 197 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccC
Confidence 88888777777888888888888888888777777888888888888888888777777888888888888888888777
Q ss_pred CccccCCCCccEEeccccccccccCCcccccccccceEEecCceecccCCccccCCCC
Q 046598 223 PSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASN 280 (986)
Q Consensus 223 p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 280 (986)
|..+.++++|+.|++++|.+.+. +++|+.|+++.|.++|.+|.+++.+..
T Consensus 198 ~~~~~~l~~L~~L~l~~N~~~~~--------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 198 DGVFDRLTSLQYIWLHDNPWDCT--------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCC--------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred HHHHhCCcCCCEEEccCCCcccc--------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 77788888888888888887754 346788888888888888888776654
No 333
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=1.7e-24 Score=253.83 Aligned_cols=190 Identities=15% Similarity=0.121 Sum_probs=142.3
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc--------hhHHHHHHHHHHHhcCCCCcceeeeeeccccc
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH--------GAFKSFIAECNTLKNIRHRNLVKILTACSGVD 758 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 758 (986)
...+...+.||+|+||.||+|... ++.+|+|+...... ...+++.+|++++++++||||+++..++.
T Consensus 335 ~~~~~~~~~LG~G~fg~Vy~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~--- 409 (540)
T 3en9_A 335 KKRKIPEHLIGKGAEADIKRDSYL--DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDV--- 409 (540)
T ss_dssp -------------CCEEEEEEECS--SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEE---
T ss_pred cccCCCCCEEeeCCCEEEEEEEEC--CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEE---
Confidence 333455678999999999999554 57889998643111 11355899999999999999995544422
Q ss_pred cCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecC
Q 046598 759 YQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDE 838 (986)
Q Consensus 759 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 838 (986)
..+..|+||||+++++|.++++. +..|+.|+++||+|||++ +|+||||||+||+++.
T Consensus 410 --~~~~~~lVmE~~~ggsL~~~l~~------------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~ 466 (540)
T 3en9_A 410 --DLDNKRIMMSYINGKLAKDVIED------------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK 466 (540)
T ss_dssp --ETTTTEEEEECCCSEEHHHHSTT------------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS
T ss_pred --eCCccEEEEECCCCCCHHHHHHH------------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC
Confidence 23456999999999999999952 458999999999999999 9999999999999998
Q ss_pred CCcEEEcccccceecCCCCCcc-----ccccccccccccccccccC--CCcCcccchhhHHHHHHHHHhCCCCCC
Q 046598 839 DMIAHIGDFGLARFLPLSSAQT-----SSIGAKGSIGYIAPEYGLG--SEVSISGDVYSYGILLLELITRKKPTD 906 (986)
Q Consensus 839 ~~~~kL~DFG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvvl~elltg~~pf~ 906 (986)
.+||+|||+|+......... ......||+.|||||++.+ ..|+..+|+|+..+-..+.+.++.+|.
T Consensus 467 --~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 467 --DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp --SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred --eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 99999999999875332211 1235679999999999887 568888999999999999888877653
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=1.3e-23 Score=220.89 Aligned_cols=203 Identities=15% Similarity=0.195 Sum_probs=166.0
Q ss_pred ccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecc-cCCCCccchhcCccccceeccc-ccccCccCccc
Q 046598 77 SISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNS-IGGAIPANISSCSNLIQLRLFH-NQLVGKIPSEL 154 (986)
Q Consensus 77 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~ 154 (986)
.+|. +. +.|++|+|++|++++..+.+|.++++|++|+|++|+ +++..+..|..+++|++|++++ |++++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 4555 33 379999999999998888899999999999999997 8866677899999999999998 99997777889
Q ss_pred cCCCCCCeEEccCCcCCCCcccccCCCcCcc---eeeccCC-cccCcCcchhhccCCCc-eeecccccccccCCccccCC
Q 046598 155 SSLSKIEHISVNDNNLTGSIPSSLGNLSSIR---SLFLSGN-NLEGSIPDTLGWLKNLV-NLTMAQNRLSGTIPSSIFNI 229 (986)
Q Consensus 155 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~l~~l 229 (986)
.++++|++|++++|++++ +|. |.++++|+ +|++++| ++++..+..|..+++|+ +|++++|+++ .+|...+..
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~ 178 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG 178 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC
Confidence 999999999999999985 665 88888888 9999999 99877777899999999 9999999998 666655555
Q ss_pred CCccEEeccccc-cccccCCcccccc-cccceEEecCceecccCCccccCCCCCcEEecccc
Q 046598 230 SSITGFDAGVNK-IQGAIPLDYGFSL-QNLQFFSVGENQLTGAIPPTISNASNLEIFHGSVN 289 (986)
Q Consensus 230 ~~L~~L~l~~N~-l~~~~p~~~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N 289 (986)
++|+.|++++|+ +. .+|...+.++ ++|+.|++++|++++. |.. .+++|+.|+++++
T Consensus 179 ~~L~~L~L~~n~~l~-~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 179 TKLDAVYLNKNKYLT-VIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp CEEEEEECTTCTTCC-EECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred CCCCEEEcCCCCCcc-cCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 788888888885 66 5555555567 7888888888888744 333 5667777777654
No 335
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=4.9e-24 Score=233.62 Aligned_cols=223 Identities=21% Similarity=0.242 Sum_probs=162.7
Q ss_pred ceEEEccCCcccccCCc---cccCCCCCCEEEccCccccCcCCCcc--cCCCCCCEEEccCccceeecCcc----c-ccc
Q 046598 359 LEVLLLDNNQIFGNIPA---AIGKFVNLQRLDMCSNRLSGTIPPAI--GELQNLKDLRLQRNRFQGNIPPS----I-GNL 428 (986)
Q Consensus 359 L~~L~L~~n~l~~~~~~---~~~~l~~L~~L~L~~N~l~~~~~~~~--~~l~~L~~L~Ls~N~l~~~~~~~----~-~~~ 428 (986)
++.+.+.++.++...-. .+..+++|++|++++|.+++..|..+ ..+++|++|+|++|++++..+.. + ...
T Consensus 66 l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~ 145 (310)
T 4glp_A 66 VRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKP 145 (310)
T ss_dssp CCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCS
T ss_pred eeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhcc
Confidence 45556666555421110 12234568888888888888888777 78888888888888888654421 1 233
Q ss_pred cccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCC--C-CcccccCCCcceEEEccCCcccccCCc----cccccc
Q 046598 429 KLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGT--I-PPQFIGLSSSLIVLDLSRNQLTGSIPS----EVGNLK 501 (986)
Q Consensus 429 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--i-p~~~~~~~~~L~~L~Ls~N~l~~~~p~----~~~~l~ 501 (986)
+|++|+|++|++.+..|..|..+++|++|+|++|++.+. + +..+++.+++|++|+|++|+++. ++. .+..++
T Consensus 146 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~ 224 (310)
T 4glp_A 146 GLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGV 224 (310)
T ss_dssp CCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTC
T ss_pred CCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCC
Confidence 688888888888878888888888888999988887642 2 22334667888888888888873 333 246778
Q ss_pred ccchhhccCccccccCcccccCC---ccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhccccccee
Q 046598 502 NLEILNVFGNKLKGEIPSTLGSC---IKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNL 578 (986)
Q Consensus 502 ~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l 578 (986)
+|++|+|++|+|++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|||++|+|++. |. +..+++|++|
T Consensus 225 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L 299 (310)
T 4glp_A 225 QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNL 299 (310)
T ss_dssp CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCE
T ss_pred CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEE
Confidence 88888888888887778777776 58888888888888 5677664 7888888988888864 33 6778888888
Q ss_pred eccCCcccc
Q 046598 579 NLSNNDLEG 587 (986)
Q Consensus 579 ~ls~N~l~~ 587 (986)
+|++|+|+.
T Consensus 300 ~L~~N~l~~ 308 (310)
T 4glp_A 300 TLDGNPFLV 308 (310)
T ss_dssp ECSSTTTSC
T ss_pred ECcCCCCCC
Confidence 888888874
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.3e-24 Score=243.73 Aligned_cols=231 Identities=19% Similarity=0.169 Sum_probs=186.2
Q ss_pred EEeccCCCCccccCcCccCCCCCCEEEccCCCccccCC----cchhccc-cCceeeceecccCCCCccchhcC-----cc
Q 046598 66 ILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIP----SEFDRLR-RLQVLALHYNSIGGAIPANISSC-----SN 135 (986)
Q Consensus 66 ~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 135 (986)
..+++.++++|.+|..+...+.|++|+|++|.+.+..+ ..|.+++ +|++|+|++|++++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35788999999999888888889999999999998777 7888898 89999999999998888888876 99
Q ss_pred ccceecccccccCccCccccC----C-CCCCeEEccCCcCCCCccccc----CCC-cCcceeeccCCcccCcCc----ch
Q 046598 136 LIQLRLFHNQLVGKIPSELSS----L-SKIEHISVNDNNLTGSIPSSL----GNL-SSIRSLFLSGNNLEGSIP----DT 201 (986)
Q Consensus 136 L~~L~Ls~N~l~~~~p~~~~~----l-~~L~~L~L~~N~l~~~~p~~~----~~l-~~L~~L~L~~N~l~~~~p----~~ 201 (986)
|++|+|++|++++..+..+.. + ++|++|+|++|++++..+..+ ..+ ++|++|+|++|++++..+ ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 999999999999777765444 4 899999999999987766554 343 699999999999986444 34
Q ss_pred hhccC-CCceeecccccccccCCcccc----CC-CCccEEeccccccccc----cCCcccccccccceEEecCceecccC
Q 046598 202 LGWLK-NLVNLTMAQNRLSGTIPSSIF----NI-SSITGFDAGVNKIQGA----IPLDYGFSLQNLQFFSVGENQLTGAI 271 (986)
Q Consensus 202 ~~~l~-~L~~L~L~~N~l~~~~p~~l~----~l-~~L~~L~l~~N~l~~~----~p~~~~~~l~~L~~L~L~~N~l~~~~ 271 (986)
+..++ +|++|+|++|++++..+..+. .+ ++|+.||+++|.+.+. ++..+....++|++|+|++|++++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 45555 999999999999977765544 34 6999999999998863 33333322458999999999998654
Q ss_pred C----ccccCCCCCcEEecccccccCCCc
Q 046598 272 P----PTISNASNLEIFHGSVNKLTGAAP 296 (986)
Q Consensus 272 p----~~l~~l~~L~~L~ls~N~l~~~~~ 296 (986)
+ ..+..+++|+.|++++|.+.++.+
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~ 270 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSK 270 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCH
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCH
Confidence 4 345778899999999998776554
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=2.7e-23 Score=227.67 Aligned_cols=201 Identities=17% Similarity=0.148 Sum_probs=96.7
Q ss_pred ccCceeeceecccCCCCccch--hcCccccceecccccccCccC----ccccCCCCCCeEEccCCcCCCCcccccCCCcC
Q 046598 110 RRLQVLALHYNSIGGAIPANI--SSCSNLIQLRLFHNQLVGKIP----SELSSLSKIEHISVNDNNLTGSIPSSLGNLSS 183 (986)
Q Consensus 110 ~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 183 (986)
++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++++..|..|+++++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 445555555555555555544 455555555555555554333 22334555555555555555444455555555
Q ss_pred cceeeccCCcccCc--C--cchhhccCCCceeecccccccccCCc----cccCCCCccEEeccccccccccCCccccc--
Q 046598 184 IRSLFLSGNNLEGS--I--PDTLGWLKNLVNLTMAQNRLSGTIPS----SIFNISSITGFDAGVNKIQGAIPLDYGFS-- 253 (986)
Q Consensus 184 L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~l~~l~~L~~L~l~~N~l~~~~p~~~~~~-- 253 (986)
|++|+|++|++.+. + +..++.+++|++|+|++|+++ .+|. .+.++++|++||+++|++.+..|..+..-
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 55555555554321 1 122244555555555555554 1121 12344555555555555554444333211
Q ss_pred ccccceEEecCceecccCCccccCCCCCcEEecccccccCCCchhhhhhhHhhhhhccCCCC
Q 046598 254 LQNLQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLG 315 (986)
Q Consensus 254 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~ 315 (986)
+++|++|+|++|+++ .+|..+. ++|+.|++++|++++++. +..+++|+.+++++|.+.
T Consensus 250 ~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 250 SSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCC-TTSCCCCSCEECSSTTTS
T ss_pred cCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCch-hhhCCCccEEECcCCCCC
Confidence 245555555555555 3344442 455555555555554422 444455555555555544
No 338
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=6.7e-23 Score=217.14 Aligned_cols=161 Identities=24% Similarity=0.223 Sum_probs=111.3
Q ss_pred ccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhcc
Q 046598 430 LFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVF 509 (986)
Q Consensus 430 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 509 (986)
++.|+|++|.+++..+..|.++++|++|+|++|+|++ +++..+..+++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 37 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 37 TEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQT-LSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCc-cCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 4455555555555556666677777777777777763 444446666777777777777776555666777777777777
Q ss_pred CccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCcccccc
Q 046598 510 GNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVV 589 (986)
Q Consensus 510 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 589 (986)
+|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+..+++|++|+|++|++++..
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTS
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCc
Confidence 77777555556677777777777777777666667777777777777777777766667777777777777777777764
Q ss_pred CC
Q 046598 590 PT 591 (986)
Q Consensus 590 p~ 591 (986)
..
T Consensus 196 ~~ 197 (251)
T 3m19_A 196 CE 197 (251)
T ss_dssp TT
T ss_pred cc
Confidence 33
No 339
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=4.9e-25 Score=245.00 Aligned_cols=207 Identities=17% Similarity=0.201 Sum_probs=136.2
Q ss_pred HHHHHHHhccCCCcCCCCCCCCCCCCCcceeeEecCCCCeEEEEeccCCCCccccCcCccCC--CCCCEEEccCCCcccc
Q 046598 24 ALLELKSKITHDPLGVLASWNESSHFCQWRGVTCSRRHQRVTILDLESLKLAGSISPHVGNL--SFLKVLRLYNNSFNHE 101 (986)
Q Consensus 24 ~ll~~k~~~~~~~~~~l~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~ 101 (986)
.|..+-+.+. ..... . .+.-|.+|+++.|+.. .++.+|++++.+. +..+..+ +.++.|++++|.+.+.
T Consensus 16 il~~If~~L~--~~d~~-~--~~~vc~~W~~~~~~~~--~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~ 85 (336)
T 2ast_B 16 LLLGIFSCLC--LPELL-K--VSGVCKRWYRLASDES--LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQP 85 (336)
T ss_dssp HHHHHHTTSC--HHHHH-H--TTSSCHHHHHHHTCST--TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSC
T ss_pred HHHHHHHhCC--HHHHH-H--HHHHHHHHHHHhcCch--hheeeccccccCC---HHHHHhhhhccceEEEcCCcccccc
Confidence 5666666552 22111 1 2334568999998643 3567788877765 3445555 7777888888877766
Q ss_pred CCcchhccccCceeeceecccCCC-CccchhcCccccceecccccccCccCccccCCCCCCeEEccCC-cCCCC-ccccc
Q 046598 102 IPSEFDRLRRLQVLALHYNSIGGA-IPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDN-NLTGS-IPSSL 178 (986)
Q Consensus 102 ~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~ 178 (986)
.+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. ++..+
T Consensus 86 ~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~ 164 (336)
T 2ast_B 86 LAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLL 164 (336)
T ss_dssp CCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHH
T ss_pred chh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHH
Confidence 555 44677788888887777654 6667777777777777777777777777777777777777777 56542 55666
Q ss_pred CCCcCcceeeccCC-cccCc-CcchhhccC-CCceeecccc--ccc-ccCCccccCCCCccEEeccccc
Q 046598 179 GNLSSIRSLFLSGN-NLEGS-IPDTLGWLK-NLVNLTMAQN--RLS-GTIPSSIFNISSITGFDAGVNK 241 (986)
Q Consensus 179 ~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~-~L~~L~L~~N--~l~-~~~p~~l~~l~~L~~L~l~~N~ 241 (986)
.++++|++|+|++| .+++. ++..+..++ +|++|+|++| .++ +.+|..+.++++|+.|++++|.
T Consensus 165 ~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~ 233 (336)
T 2ast_B 165 SSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSV 233 (336)
T ss_dssp HHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCT
T ss_pred hcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCC
Confidence 77777777777777 77643 466667777 7777777777 343 3344444555555555555444
No 340
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.4e-22 Score=213.15 Aligned_cols=197 Identities=18% Similarity=0.236 Sum_probs=122.5
Q ss_pred ccceEEEccCCcccccCCccccCCCCCCEEEccCcc-ccCcCCCcccCCCCCCEEEccC-ccceeecCcccccccccEEE
Q 046598 357 TTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNR-LSGTIPPAIGELQNLKDLRLQR-NRFQGNIPPSIGNLKLFILY 434 (986)
Q Consensus 357 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~~~L~~L~ 434 (986)
.+++.|++++|+|++..+..|..+++|++|++++|. +++..+..|..+++|++|++++ |++++
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~--------------- 95 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTY--------------- 95 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCE---------------
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeE---------------
Confidence 356666666666665555566666666666666664 5544455566666666555555 55553
Q ss_pred ecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcce---EEEccCC-cccccCCcccccccccc-hhhcc
Q 046598 435 LSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLI---VLDLSRN-QLTGSIPSEVGNLKNLE-ILNVF 509 (986)
Q Consensus 435 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~Ls 509 (986)
..+..|..+++|++|++++|+++ .+|. +..+++|+ .|++++| ++++..+..|..+++|+ .|+++
T Consensus 96 --------i~~~~f~~l~~L~~L~l~~n~l~-~lp~--~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~ 164 (239)
T 2xwt_C 96 --------IDPDALKELPLLKFLGIFNTGLK-MFPD--LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLY 164 (239)
T ss_dssp --------ECTTSEECCTTCCEEEEEEECCC-SCCC--CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECC
T ss_pred --------cCHHHhCCCCCCCEEeCCCCCCc-cccc--cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcC
Confidence 44445556666666666666666 3554 44555555 7777777 67655555567777777 77777
Q ss_pred CccccccCcccccCCccccEEeccccc-ccccCCccccCC-CCCCEEeCCCccCcccCchhhhcccccceeeccCC
Q 046598 510 GNKLKGEIPSTLGSCIKLEQLEMQENF-LQGPIPSSLSSL-RGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNN 583 (986)
Q Consensus 510 ~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N 583 (986)
+|+++ .+|......++|++|+|++|+ +++..+..|..+ ++|+.|+|++|+|++ +|.. .+++|+.|+++++
T Consensus 165 ~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 165 NNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp SCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred CCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 77776 444433333677777777774 776556667777 777777777777774 3332 4566667777665
No 341
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=3.2e-24 Score=240.52 Aligned_cols=261 Identities=14% Similarity=0.110 Sum_probs=155.0
Q ss_pred EEEccCCCccccCCcchhccccCceeeceecccCCCCc----cchhcCc-cccceecccccccCccCccccCC-----CC
Q 046598 90 VLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIP----ANISSCS-NLIQLRLFHNQLVGKIPSELSSL-----SK 159 (986)
Q Consensus 90 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~ 159 (986)
+++|+.|++++.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|.+++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46778888888777777777778888888888886666 6667777 78888888888877666666664 77
Q ss_pred CCeEEccCCcCCCCcccccC----CC-cCcceeeccCCcccCcCcchhhc-----cCCCceeecccccccccCCccccCC
Q 046598 160 IEHISVNDNNLTGSIPSSLG----NL-SSIRSLFLSGNNLEGSIPDTLGW-----LKNLVNLTMAQNRLSGTIPSSIFNI 229 (986)
Q Consensus 160 L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~p~~l~~l 229 (986)
|++|+|++|++++..+..+. .+ ++|++|+|++|++++..+..+.. .++|++|+|++|++++..+..+..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~- 160 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ- 160 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH-
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH-
Confidence 77777777777766555433 33 67777777777777655554433 246777777777766432222110
Q ss_pred CCccEEeccccccccccCCcccccc-cccceEEecCceecccCCcccc----CC-CCCcEEecccccccCCCchhhhhhh
Q 046598 230 SSITGFDAGVNKIQGAIPLDYGFSL-QNLQFFSVGENQLTGAIPPTIS----NA-SNLEIFHGSVNKLTGAAPYLEKLQR 303 (986)
Q Consensus 230 ~~L~~L~l~~N~l~~~~p~~~~~~l-~~L~~L~L~~N~l~~~~p~~l~----~l-~~L~~L~ls~N~l~~~~~~l~~l~~ 303 (986)
.+ ..+ ++|++|+|++|++++..+..++ .. ++|+.|++++|.++.....
T Consensus 161 -------------------~l-~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~------ 214 (362)
T 3goz_A 161 -------------------IL-AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYA------ 214 (362)
T ss_dssp -------------------HH-HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHH------
T ss_pred -------------------HH-hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHH------
Confidence 00 011 2455555555555544443322 22 3566666666655431110
Q ss_pred HhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCCCcccccccccceEEEccCCcccccCC----ccccC
Q 046598 304 LLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIP----AAIGK 379 (986)
Q Consensus 304 L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~----~~~~~ 379 (986)
.++..+....++|+.|+|++|.|++..+ ..+..
T Consensus 215 -------------------------------------------~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~ 251 (362)
T 3goz_A 215 -------------------------------------------ELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDS 251 (362)
T ss_dssp -------------------------------------------HHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTT
T ss_pred -------------------------------------------HHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhc
Confidence 1222222222456666666666665433 33456
Q ss_pred CCCCCEEEccCccccCcC-------CCcccCCCCCCEEEccCccceee
Q 046598 380 FVNLQRLDMCSNRLSGTI-------PPAIGELQNLKDLRLQRNRFQGN 420 (986)
Q Consensus 380 l~~L~~L~L~~N~l~~~~-------~~~~~~l~~L~~L~Ls~N~l~~~ 420 (986)
+++|++|+|++|.+.+.. +..+..+++|+.|++++|++...
T Consensus 252 l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 252 LKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp TTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred CCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 677777777777744322 23455566666666666666544
No 342
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=1.5e-22 Score=208.00 Aligned_cols=188 Identities=20% Similarity=0.238 Sum_probs=140.5
Q ss_pred CCCCCcceeeEecCCCCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCC
Q 046598 46 SSHFCQWRGVTCSRRHQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGA 125 (986)
Q Consensus 46 ~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 125 (986)
..+.|+|++|.|+... ++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|++++.
T Consensus 3 ~~C~C~~~~v~c~~~~------------l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 67 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQG------------RT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSL 67 (208)
T ss_dssp TTCEEETTEEECCSSC------------CS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCC
T ss_pred CCCEECCCEEEecCCC------------cc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCcc
Confidence 4466899999997532 22 344333 35788899999988877777788888888888888888866
Q ss_pred CccchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhcc
Q 046598 126 IPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWL 205 (986)
Q Consensus 126 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 205 (986)
.+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+
T Consensus 68 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 147 (208)
T 2o6s_A 68 PNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRL 147 (208)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred ChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccC
Confidence 66677888888888888888886666677888888888888888887666677888888888888888876666667777
Q ss_pred CCCceeecccccccccCCccccCCCCccEEeccccccccccCCcccccccccceEEecCceecccCCccccCCCC
Q 046598 206 KNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASN 280 (986)
Q Consensus 206 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 280 (986)
++|++|+|++|.+.+. +++|++|+++.|+++|.+|.+++.++.
T Consensus 148 ~~L~~L~l~~N~~~~~--------------------------------~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 148 TSLQYIWLHDNPWDCT--------------------------------CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTCCEEECCSCCBCCC--------------------------------TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CCccEEEecCCCeecC--------------------------------CCCHHHHHHHHHhCCceeeccCccccC
Confidence 7888888877766532 345666667777777777776665543
No 343
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=7.3e-23 Score=228.26 Aligned_cols=220 Identities=15% Similarity=0.133 Sum_probs=171.5
Q ss_pred CCCcceeeEecCCCCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCc
Q 046598 48 HFCQWRGVTCSRRHQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIP 127 (986)
Q Consensus 48 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 127 (986)
+.|+|+.|.|++ ++++ .+|..+ .+.+++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+|
T Consensus 7 C~C~~~~v~C~~------------~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~ 71 (350)
T 4ay9_X 7 CHCSNRVFLCQE------------SKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIE 71 (350)
T ss_dssp SEEETTEEEEES------------TTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEEC
T ss_pred cEeeCCEEEecC------------CCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccC
Confidence 347888888864 3444 566655 3678999999999987667789999999999999999876665
Q ss_pred -cchhcCccccc-eecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccC-CcccCcCcchhhc
Q 046598 128 -ANISSCSNLIQ-LRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSG-NNLEGSIPDTLGW 204 (986)
Q Consensus 128 -~~~~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~ 204 (986)
..|.++++|++ +.++.|+++...|..|..+++|++|++++|++++..+..+.+..++..|++.+ |++....+..|..
T Consensus 72 ~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~ 151 (350)
T 4ay9_X 72 ADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVG 151 (350)
T ss_dssp TTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTT
T ss_pred hhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhh
Confidence 46788888765 66777999977788999999999999999999977777777888888899866 5777666667777
Q ss_pred cC-CCceeecccccccccCCccccCCCCccEEeccccccccccCCcccccccccceEEecCceecccCCccccCCCCCcE
Q 046598 205 LK-NLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASNLEI 283 (986)
Q Consensus 205 l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 283 (986)
+. .++.|+|++|+|+ .+|...+...+|+.++++.|...+.+|.+.+.++++|++|+|++|+|+...+..|.++++|+.
T Consensus 152 ~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~ 230 (350)
T 4ay9_X 152 LSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRA 230 (350)
T ss_dssp SBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEEC
T ss_pred cchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhh
Confidence 65 6888999999998 667777777888888887655555888887778888888888888888655555555554443
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=2.1e-24 Score=244.64 Aligned_cols=243 Identities=19% Similarity=0.247 Sum_probs=175.6
Q ss_pred CCCcccccccccceEEEccCCcccccCC----ccccCCCCCCEEEccCc---cccCcCCCcc-------cCCCCCCEEEc
Q 046598 347 SLPACISNLSTTLEVLLLDNNQIFGNIP----AAIGKFVNLQRLDMCSN---RLSGTIPPAI-------GELQNLKDLRL 412 (986)
Q Consensus 347 ~~p~~~~~~~~~L~~L~L~~n~l~~~~~----~~~~~l~~L~~L~L~~N---~l~~~~~~~~-------~~l~~L~~L~L 412 (986)
.++..+..+ ++|+.|+|++|+|++..+ ..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|
T Consensus 23 ~l~~~l~~~-~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~L 101 (386)
T 2ca6_A 23 SVFAVLLED-DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRL 101 (386)
T ss_dssp TTSHHHHHC-SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEEC
T ss_pred HHHHHHhcC-CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEEC
Confidence 344444444 457778888887775533 34667788888888775 3444455444 57778888888
Q ss_pred cCcccee----ecCccccc-ccccEEEecccccCCCCCcccCC----C---------CCCCeeecCCCccC-CCCCc--c
Q 046598 413 QRNRFQG----NIPPSIGN-LKLFILYLSYNFLQGSIPSSLGR----Y---------ETLTTIDLSNNNLT-GTIPP--Q 471 (986)
Q Consensus 413 s~N~l~~----~~~~~~~~-~~L~~L~L~~N~l~~~~p~~~~~----l---------~~L~~L~L~~N~l~-~~ip~--~ 471 (986)
++|++.+ .+|..+.. .+|++|+|++|.+++..+..+.. + ++|++|+|++|+++ +.+|. .
T Consensus 102 s~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 181 (386)
T 2ca6_A 102 SDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAK 181 (386)
T ss_dssp CSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHH
Confidence 8888776 34444443 35788888888776444433333 3 78999999999987 33442 2
Q ss_pred cccCCCcceEEEccCCcccc-----cCCcccccccccchhhccCcccc----ccCcccccCCccccEEeccccccccc--
Q 046598 472 FIGLSSSLIVLDLSRNQLTG-----SIPSEVGNLKNLEILNVFGNKLK----GEIPSTLGSCIKLEQLEMQENFLQGP-- 540 (986)
Q Consensus 472 ~~~~~~~L~~L~Ls~N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~-- 540 (986)
.+..+++|+.|+|++|+|+. ..|..+..+++|+.|+|++|+++ +.+|..+..+++|++|+|++|.|++.
T Consensus 182 ~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 261 (386)
T 2ca6_A 182 TFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGA 261 (386)
T ss_dssp HHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHH
T ss_pred HHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhH
Confidence 24566789999999998872 34447888899999999999986 56788888999999999999999865
Q ss_pred --CCccc--cCCCCCCEEeCCCccCcc----cCchhh-hcccccceeeccCCccccccC
Q 046598 541 --IPSSL--SSLRGLSVLDLSQNNLSG----KIPELL-IRLQLVKNLNLSNNDLEGVVP 590 (986)
Q Consensus 541 --~p~~~--~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~l~ls~N~l~~~~p 590 (986)
+|..+ +.+++|+.|+|++|+|++ .+|..+ .++++|++|+|++|++++..+
T Consensus 262 ~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 262 AAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 55666 348899999999999987 477777 668999999999999887654
No 345
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=1e-22 Score=218.63 Aligned_cols=152 Identities=18% Similarity=0.104 Sum_probs=120.2
Q ss_pred HHHHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc------------------hhHHHHHHHHHHHhcCC
Q 046598 682 NLYNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH------------------GAFKSFIAECNTLKNIR 743 (986)
Q Consensus 682 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~ 743 (986)
.+......|.+.+.||+|+||.||+|.+ .+++.||||+++.... .....+.+|++++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 3344455677889999999999999999 6689999999864221 13457899999999998
Q ss_pred CCcceeeeeeccccccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 046598 744 HRNLVKILTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPP 823 (986)
Q Consensus 744 h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ 823 (986)
| +++.+++. .+..++||||++|++|.+ +.. .+...++.|++.||+|||+. |
T Consensus 163 ~---~~v~~~~~------~~~~~lvmE~~~g~~L~~-l~~----------------~~~~~i~~qi~~~l~~lH~~---g 213 (282)
T 1zar_A 163 G---LAVPKVYA------WEGNAVLMELIDAKELYR-VRV----------------ENPDEVLDMILEEVAKFYHR---G 213 (282)
T ss_dssp T---SSSCCEEE------EETTEEEEECCCCEEGGG-CCC----------------SCHHHHHHHHHHHHHHHHHT---T
T ss_pred C---CCcCeEEe------ccceEEEEEecCCCcHHH-cch----------------hhHHHHHHHHHHHHHHHHHC---C
Confidence 4 55555421 145699999999999998 520 12346999999999999999 9
Q ss_pred eEeecCCCCCeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccC
Q 046598 824 IAHCDLKPSNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG 879 (986)
Q Consensus 824 ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 879 (986)
|+||||||+||+++ ++.+||+|||+|+. +..|+|||++..
T Consensus 214 iiHrDlkp~NILl~-~~~vkl~DFG~a~~---------------~~~~~a~e~l~r 253 (282)
T 1zar_A 214 IVHGDLSQYNVLVS-EEGIWIIDFPQSVE---------------VGEEGWREILER 253 (282)
T ss_dssp EECSCCSTTSEEEE-TTEEEECCCTTCEE---------------TTSTTHHHHHHH
T ss_pred CEeCCCCHHHEEEE-CCcEEEEECCCCeE---------------CCCCCHHHHHHH
Confidence 99999999999999 99999999999973 345788998643
No 346
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=4.7e-23 Score=241.22 Aligned_cols=208 Identities=23% Similarity=0.333 Sum_probs=155.4
Q ss_pred CCCCCCCCCCCC-----cceee-EecCCCCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccC
Q 046598 39 VLASWNESSHFC-----QWRGV-TCSRRHQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRL 112 (986)
Q Consensus 39 ~l~~w~~~~~~c-----~w~gv-~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 112 (986)
.+.+|..+.++| .|.|+ .|.. .+++.|+|++|++++ +|+.+. ++|++|+|++|+|+ .+| ..+++|
T Consensus 32 ~l~~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L 102 (571)
T 3cvr_A 32 AWDKWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASL 102 (571)
T ss_dssp HHHHHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTC
T ss_pred HHHHHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCC
Confidence 456786666778 79999 7864 368899999999986 777664 78999999999998 566 457889
Q ss_pred ceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCC
Q 046598 113 QVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGN 192 (986)
Q Consensus 113 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 192 (986)
++|+|++|+|++ +|. |.. +|++|+|++|.|++ +|. .+++|++|+|++|++++ +|. .+++|++|+|++|
T Consensus 103 ~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N 170 (571)
T 3cvr_A 103 EYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNN 170 (571)
T ss_dssp CEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSS
T ss_pred CEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCC
Confidence 999999999986 676 655 89999999999886 665 67888999999998885 554 5678888888888
Q ss_pred cccCcCcchhhccCCCceeecccccccccCCccccCCCCccEEeccccccccccCCcccccccccceEEecCceecccCC
Q 046598 193 NLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAIP 272 (986)
Q Consensus 193 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p 272 (986)
+|++ +|. |. ++|+.|+|++|+|+ .+|. +.. +| ....+.|+.|+|++|+|+ .+|
T Consensus 171 ~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L------------------~~~~~~L~~L~Ls~N~l~-~lp 223 (571)
T 3cvr_A 171 QLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RN------------------HHSEETEIFFRCRENRIT-HIP 223 (571)
T ss_dssp CCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------------------------CCEEEECCSSCCC-CCC
T ss_pred CCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hh------------------hcccccceEEecCCCcce-ecC
Confidence 8885 666 65 78888888888887 5565 432 33 001233467777777776 466
Q ss_pred ccccCCCCCcEEecccccccCC
Q 046598 273 PTISNASNLEIFHGSVNKLTGA 294 (986)
Q Consensus 273 ~~l~~l~~L~~L~ls~N~l~~~ 294 (986)
..+..+++|+.|++++|++++.
T Consensus 224 ~~l~~l~~L~~L~L~~N~l~~~ 245 (571)
T 3cvr_A 224 ENILSLDPTCTIILEDNPLSSR 245 (571)
T ss_dssp GGGGGSCTTEEEECCSSSCCHH
T ss_pred HHHhcCCCCCEEEeeCCcCCCc
Confidence 6666677777777777777654
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=3.9e-22 Score=217.89 Aligned_cols=194 Identities=27% Similarity=0.372 Sum_probs=128.5
Q ss_pred CCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCccccc-ccccEEEecccccCCCCCcccCCCCCCCeee
Q 046598 380 FVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGN-LKLFILYLSYNFLQGSIPSSLGRYETLTTID 458 (986)
Q Consensus 380 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 458 (986)
+++|++|++++|.++. ++ .+..+++|++|+|++|++++..+ +.. .+|++|+|++|.+++ + ..+..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~-~~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-V-SAIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-C-GGGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-c-hhhcCCCCCCEEE
Confidence 3444444444444442 22 34444444444444444443222 222 234455555555543 2 2577788888888
Q ss_pred cCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccccEEeccccccc
Q 046598 459 LSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQ 538 (986)
Q Consensus 459 L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 538 (986)
+++|+++ .++. +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++ ++. +..+++|+.|+|++|+++
T Consensus 114 l~~n~l~-~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 114 LTSTQIT-DVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp CTTSCCC-CCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCC
T ss_pred CCCCCCC-Cchh--hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccC
Confidence 8888887 4553 6777888888888888885433 7788888888888888885 333 888888888888888888
Q ss_pred ccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccC
Q 046598 539 GPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVP 590 (986)
Q Consensus 539 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 590 (986)
+..+ +..+++|+.|+|++|++++..| +..+++|+.|+|++|++++.+.
T Consensus 187 ~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~~~ 234 (308)
T 1h6u_A 187 DISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPV 234 (308)
T ss_dssp CCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECCCE
T ss_pred cChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecCCe
Confidence 6443 7888888888888888886543 7888888888888888887443
No 348
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=7.1e-22 Score=215.81 Aligned_cols=198 Identities=26% Similarity=0.353 Sum_probs=149.6
Q ss_pred ccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCC
Q 046598 82 VGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIE 161 (986)
Q Consensus 82 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 161 (986)
+..+++|++|++++|.+.. +| .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++. + .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCC
Confidence 3456778888888888764 44 57778888888888888875443 77888888888888887753 3 577888888
Q ss_pred eEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceeecccccccccCCccccCCCCccEEeccccc
Q 046598 162 HISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNK 241 (986)
Q Consensus 162 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~ 241 (986)
+|+|++|++++. +. +.++++|++|+|++|++++..+ ++.+++|++|+|++|++++. +. +.++++|+.|++++|.
T Consensus 111 ~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCc
Confidence 888888888754 32 7888888888888888875433 77888888888888888753 33 7778888888888888
Q ss_pred cccccCCcccccccccceEEecCceecccCCccccCCCCCcEEecccccccCCCc
Q 046598 242 IQGAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLTGAAP 296 (986)
Q Consensus 242 l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~ 296 (986)
+.+..+ +..+++|++|++++|++++..+ +..+++|+.|++++|++++.+.
T Consensus 185 l~~~~~---l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~~~ 234 (308)
T 1h6u_A 185 ISDISP---LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPV 234 (308)
T ss_dssp CCCCGG---GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECCCE
T ss_pred cCcChh---hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecCCe
Confidence 875443 4467888888999988886553 8888999999999999887554
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=1.3e-21 Score=218.23 Aligned_cols=242 Identities=19% Similarity=0.203 Sum_probs=146.7
Q ss_pred EEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecC-cccccc-cc-cEEEecc
Q 046598 361 VLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIP-PSIGNL-KL-FILYLSY 437 (986)
Q Consensus 361 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~~-~L-~~L~L~~ 437 (986)
+++.++++++ .+|..+ .+++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+| ..|..+ ++ +.+.+++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 3455555555 344443 2456666666666664444566666666666666666655444 344443 33 3455666
Q ss_pred cccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccC-CcccccCCccccccc-ccchhhccCccccc
Q 046598 438 NFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSR-NQLTGSIPSEVGNLK-NLEILNVFGNKLKG 515 (986)
Q Consensus 438 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~-N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~ 515 (986)
|+++...|..|..+++|++|++++|+|+ .+|+..+....++..|++++ |+++...+..|..+. .++.|+|++|+|+
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~- 167 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ- 167 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCS-SCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-
T ss_pred CcccccCchhhhhccccccccccccccc-cCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-
Confidence 7777666777777777777777777777 45544444555677777754 566654455566654 5777788888877
Q ss_pred cCcccccCCccccEEeccc-ccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCCccc
Q 046598 516 EIPSTLGSCIKLEQLEMQE-NFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPTQGV 594 (986)
Q Consensus 516 ~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~ 594 (986)
.+|.......+|++|++++ |.++...+..|..+++|+.|||++|+|+...+..+.++++|+.+++ +.+. .+|....
T Consensus 168 ~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP~l~~ 244 (350)
T 4ay9_X 168 EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLPTLEK 244 (350)
T ss_dssp EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCCCTTT
T ss_pred CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCCCchh
Confidence 4555555567777787764 5666444456777888888888888887554445555554444333 3344 3444555
Q ss_pred cccccceeeeCCccccc
Q 046598 595 FKNASITSVFGNLKLCG 611 (986)
Q Consensus 595 ~~~~~~~~~~~n~~lcg 611 (986)
++++..+.+ +|++.|.
T Consensus 245 l~~L~~l~l-~~~~~c~ 260 (350)
T 4ay9_X 245 LVALMEASL-TYPSHCC 260 (350)
T ss_dssp CCSCCEEEC-SCHHHHH
T ss_pred CcChhhCcC-CCCcccc
Confidence 666665554 3555553
No 350
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=1.9e-23 Score=236.76 Aligned_cols=238 Identities=15% Similarity=0.240 Sum_probs=195.2
Q ss_pred CeEEEEeccCCCCccc----cCcCccCCCCCCEEEccCC---CccccCCcch-------hccccCceeeceecccCC---
Q 046598 62 QRVTILDLESLKLAGS----ISPHVGNLSFLKVLRLYNN---SFNHEIPSEF-------DRLRRLQVLALHYNSIGG--- 124 (986)
Q Consensus 62 ~~v~~l~l~~~~l~~~----~~~~~~~l~~L~~L~L~~n---~l~~~~p~~~-------~~l~~L~~L~L~~N~l~~--- 124 (986)
.+++.|+|++|++++. ++..+..+++|++|+|++| ++.+.+|..+ ..+++|++|+|++|.+++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 4588999999999876 4455788999999999996 5556667655 788999999999999997
Q ss_pred -CCccchhcCccccceecccccccCccCccccC----C---------CCCCeEEccCCcCC-CCcc---cccCCCcCcce
Q 046598 125 -AIPANISSCSNLIQLRLFHNQLVGKIPSELSS----L---------SKIEHISVNDNNLT-GSIP---SSLGNLSSIRS 186 (986)
Q Consensus 125 -~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~----l---------~~L~~L~L~~N~l~-~~~p---~~~~~l~~L~~ 186 (986)
.+|..+..+++|++|+|++|.+++..+..+.. + ++|++|+|++|+++ +.++ ..+..+++|++
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 47888999999999999999997554444443 4 89999999999997 4455 46778899999
Q ss_pred eeccCCccc--C---cCcchhhccCCCceeeccccccc----ccCCccccCCCCccEEeccccccccc----cCCccc-c
Q 046598 187 LFLSGNNLE--G---SIPDTLGWLKNLVNLTMAQNRLS----GTIPSSIFNISSITGFDAGVNKIQGA----IPLDYG-F 252 (986)
Q Consensus 187 L~L~~N~l~--~---~~p~~~~~l~~L~~L~L~~N~l~----~~~p~~l~~l~~L~~L~l~~N~l~~~----~p~~~~-~ 252 (986)
|+|++|+++ + ..|..+..+++|++|+|++|+++ +.+|..+..+++|+.|++++|.+.+. +|..+. .
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~ 271 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKL 271 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTC
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhc
Confidence 999999997 2 34558889999999999999996 67888999999999999999999865 333321 2
Q ss_pred cccccceEEecCceecc----cCCccc-cCCCCCcEEecccccccCCCchhh
Q 046598 253 SLQNLQFFSVGENQLTG----AIPPTI-SNASNLEIFHGSVNKLTGAAPYLE 299 (986)
Q Consensus 253 ~l~~L~~L~L~~N~l~~----~~p~~l-~~l~~L~~L~ls~N~l~~~~~~l~ 299 (986)
.+++|+.|+|++|.+++ .+|..+ .++++|+.|++++|++++..+.+.
T Consensus 272 ~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~~~~ 323 (386)
T 2ca6_A 272 ENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVD 323 (386)
T ss_dssp SSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSHHHH
T ss_pred cCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchhHHH
Confidence 37899999999999997 478777 678999999999999998775433
No 351
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=1.7e-21 Score=228.09 Aligned_cols=189 Identities=29% Similarity=0.370 Sum_probs=149.1
Q ss_pred cceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccccccEEEecc
Q 046598 358 TLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSY 437 (986)
Q Consensus 358 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~ 437 (986)
+++.|+|++|+|++ +|..+ +++|++|+|++|.|+ .+| ..+++|++|+|++|+|++ +|. +.. +|++|+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~-~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA-SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT-TCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc-CCCEEECCC
Confidence 67788888888886 55544 377888888888888 566 446888888888888887 555 544 788888888
Q ss_pred cccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccC
Q 046598 438 NFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEI 517 (986)
Q Consensus 438 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 517 (986)
|+|++ +|. .+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~-~lp~----~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLT-MLPE----LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCS-CCCC----CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CcCCC-CCC---cCccccEEeCCCCccC-cCCC----cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 88886 555 5788999999999998 4776 45788999999999986 666 65 88999999999998 66
Q ss_pred cccccCCccc-------cEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccc
Q 046598 518 PSTLGSCIKL-------EQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQL 574 (986)
Q Consensus 518 p~~~~~l~~L-------~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 574 (986)
|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..++.
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 76 654 77 89999999998 57888888999999999999998888888887755
No 352
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.85 E-value=1.2e-22 Score=225.76 Aligned_cols=199 Identities=16% Similarity=0.176 Sum_probs=151.5
Q ss_pred CCCEEEccCCCccccCCcchhcc--ccCceeeceecccCCCCccchhcCccccceecccccccCc-cCccccCCCCCCeE
Q 046598 87 FLKVLRLYNNSFNHEIPSEFDRL--RRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGK-IPSELSSLSKIEHI 163 (986)
Q Consensus 87 ~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L 163 (986)
.++.+++++|.+. |..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4778999998886 6778888 8899999999999877665 55789999999999998866 78888899999999
Q ss_pred EccCCcCCCCcccccCCCcCcceeeccCC-cccCc-CcchhhccCCCceeecccc-ccccc-CCccccCCC-CccEEecc
Q 046598 164 SVNDNNLTGSIPSSLGNLSSIRSLFLSGN-NLEGS-IPDTLGWLKNLVNLTMAQN-RLSGT-IPSSIFNIS-SITGFDAG 238 (986)
Q Consensus 164 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~-~L~~L~l~ 238 (986)
+|++|.+++..+..++++++|++|+|++| .+++. ++..+..+++|++|+|++| .+++. ++..+..++ +|+.|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99999988888888999999999999999 67753 6777888999999999999 88754 566677777 77777777
Q ss_pred ccc--cc-cccCCcccccccccceEEecCce-ecccCCccccCCCCCcEEeccccc
Q 046598 239 VNK--IQ-GAIPLDYGFSLQNLQFFSVGENQ-LTGAIPPTISNASNLEIFHGSVNK 290 (986)
Q Consensus 239 ~N~--l~-~~~p~~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~ls~N~ 290 (986)
+|. +. +.+|. ....+++|+.|++++|. +++..+..+.++++|+.|++++|.
T Consensus 204 ~~~~~~~~~~l~~-~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 204 GYRKNLQKSDLST-LVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp SCGGGSCHHHHHH-HHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred CCcccCCHHHHHH-HHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 773 33 22332 22345666666666666 555555555556666665555553
No 353
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.85 E-value=1.6e-21 Score=201.58 Aligned_cols=182 Identities=16% Similarity=0.122 Sum_probs=148.1
Q ss_pred ccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhcc
Q 046598 430 LFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVF 509 (986)
Q Consensus 430 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 509 (986)
-+.+++++|.++ .+|..+. +.+++|+|++|+|++..|..++..+++|+.|+|++|+|++..+..|..+++|++|+|+
T Consensus 13 ~~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 13 GTTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 356777777777 4666553 3578999999999865566668888999999999999998777789999999999999
Q ss_pred CccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCcccccc
Q 046598 510 GNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVV 589 (986)
Q Consensus 510 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 589 (986)
+|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|++++..
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 99999888888999999999999999999988999999999999999999999988999999999999999999999887
Q ss_pred CCccccccccceeeeCCcccccCCC
Q 046598 590 PTQGVFKNASITSVFGNLKLCGGIP 614 (986)
Q Consensus 590 p~~~~~~~~~~~~~~~n~~lcg~~~ 614 (986)
+-......+....+......|+.|.
T Consensus 170 ~l~~l~~~~~~~~~~~~~~~C~~P~ 194 (220)
T 2v70_A 170 YLAWLGEWLRKKRIVTGNPRCQKPY 194 (220)
T ss_dssp GGHHHHHHHHHSCCBCCCCEEEESG
T ss_pred chHHHHHHHHhcCccccCCccCCCh
Confidence 6543222222222223334677654
No 354
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.85 E-value=1.2e-22 Score=247.14 Aligned_cols=257 Identities=20% Similarity=0.193 Sum_probs=137.4
Q ss_pred CCHhHHHHHHHHHHhccCCCcCCCCCCC-CCCCCCcceeeEecCCCCeEEEEeccCCCCccccCcCccCCCCCCEEEccC
Q 046598 17 GNETDRLALLELKSKITHDPLGVLASWN-ESSHFCQWRGVTCSRRHQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYN 95 (986)
Q Consensus 17 ~~~~~~~~ll~~k~~~~~~~~~~l~~w~-~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~ 95 (986)
....++++|++++.+........-..|. ..+.++.|.+++++. .+++.++|.++.+.. ++..+ |+.++|+.
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~~~-----l~~l~Ls~ 200 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDE-ANQAL-----LQHKKLSQ 200 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCc-chhhH-----hhcCccCc
Confidence 3467889999999887555555556774 334567899999875 579999999998875 33333 33444444
Q ss_pred CCccc---------cCCcchhccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEcc
Q 046598 96 NSFNH---------EIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVN 166 (986)
Q Consensus 96 n~l~~---------~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 166 (986)
|.|.+ ..|..|..+++|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|++|++|++|+|+
T Consensus 201 ~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls 278 (727)
T 4b8c_D 201 YSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLS 278 (727)
T ss_dssp ---------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECT
T ss_pred ccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCc
Confidence 44432 45788999999999999999998 77878889999999999999999 889999999999999999
Q ss_pred CCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceeecccccccccCCccccCCCCc-cEEeccccccccc
Q 046598 167 DNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSI-TGFDAGVNKIQGA 245 (986)
Q Consensus 167 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L-~~L~l~~N~l~~~ 245 (986)
+|+|+ .+|..|++|++|++|+|++|.|+ .+|..|+.|++|++|+|++|+|++.+|..+..+... ..++++.|.+.+.
T Consensus 279 ~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~ 356 (727)
T 4b8c_D 279 HNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIP 356 (727)
T ss_dssp TSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred CCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCc
Confidence 99999 77999999999999999999998 778889999999999999999998888887765332 3477888888887
Q ss_pred cCCcccccccccceEEecCc--------eecccCCccccCCCCCcEEeccccccc
Q 046598 246 IPLDYGFSLQNLQFFSVGEN--------QLTGAIPPTISNASNLEIFHGSVNKLT 292 (986)
Q Consensus 246 ~p~~~~~~l~~L~~L~L~~N--------~l~~~~p~~l~~l~~L~~L~ls~N~l~ 292 (986)
+|. .|+.|+++.| .+++..+..+..+..+....+++|.+.
T Consensus 357 ~p~-------~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 357 LPH-------ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp CCC-------C-----------------------------------------CCC
T ss_pred Ccc-------ccceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 774 3566777766 333344444455555555566666553
No 355
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=5.3e-21 Score=199.15 Aligned_cols=165 Identities=23% Similarity=0.276 Sum_probs=135.6
Q ss_pred CCCCCCCCCCcceeeEecCCCCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceec
Q 046598 41 ASWNESSHFCQWRGVTCSRRHQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYN 120 (986)
Q Consensus 41 ~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 120 (986)
.-|..+.+.|+|++|.|+.. +++ .+|..+. +.|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 10 ~~~~~~~~~Cs~~~v~c~~~------------~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N 74 (229)
T 3e6j_A 10 SAACPSQCSCSGTTVDCRSK------------RHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSN 74 (229)
T ss_dssp -CCCCTTCEEETTEEECTTS------------CCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred hccCCCCCEEeCCEeEccCC------------CcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCC
Confidence 44556778999999999753 232 5555443 78999999999999888889999999999999999
Q ss_pred ccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCcc
Q 046598 121 SIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPD 200 (986)
Q Consensus 121 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 200 (986)
+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+++ .+|..+.++++|++|+|++|+|++..+.
T Consensus 75 ~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~ 153 (229)
T 3e6j_A 75 QLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHG 153 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTT
T ss_pred CCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHH
Confidence 998666677888999999999999998777777888889999999999888 7788888888888888888888876667
Q ss_pred hhhccCCCceeeccccccccc
Q 046598 201 TLGWLKNLVNLTMAQNRLSGT 221 (986)
Q Consensus 201 ~~~~l~~L~~L~L~~N~l~~~ 221 (986)
.|..+++|+.|+|++|.+.+.
T Consensus 154 ~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 154 AFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp TTTTCTTCCEEECTTSCBCTT
T ss_pred HHhCCCCCCEEEeeCCCccCC
Confidence 788888888888888888743
No 356
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=3.3e-20 Score=190.31 Aligned_cols=149 Identities=23% Similarity=0.247 Sum_probs=70.1
Q ss_pred EEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccc-cccEEEecccc
Q 046598 361 VLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNL-KLFILYLSYNF 439 (986)
Q Consensus 361 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~L~~L~L~~N~ 439 (986)
.++++++.++. +|..+ .++|++|++++|.+++..+..|..+++|++|+|++|++++..+..+..+ +|++|+|++|+
T Consensus 11 ~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 11 TVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp EEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 45555666552 33322 3466666777666665555556666666666666666654333333222 23444444444
Q ss_pred cCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccc
Q 046598 440 LQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKL 513 (986)
Q Consensus 440 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 513 (986)
+++..+..|..+++|++|++++|+|+ .+|...+..+++|+.|++++|++++..+..|..+++|+.|+|++|.+
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 160 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 160 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCB
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCc-ccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCe
Confidence 44333333444444444444444444 23333333444444444444444433333344444444444444433
No 357
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=1.4e-20 Score=194.59 Aligned_cols=156 Identities=26% Similarity=0.333 Sum_probs=128.7
Q ss_pred cEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccC
Q 046598 431 FILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFG 510 (986)
Q Consensus 431 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 510 (986)
+.+++++|.++ .+|..+. ++|+.|+|++|+|+ .++...+..+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~-~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCC-EECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCC-CcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 45666777776 4565543 57888888888888 56655577888889999999998877788888899999999999
Q ss_pred ccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccC
Q 046598 511 NKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVP 590 (986)
Q Consensus 511 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 590 (986)
|+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|++.+...
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 99986656667889999999999999998888889999999999999999998888888889999999999999987654
No 358
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=3e-20 Score=192.06 Aligned_cols=159 Identities=21% Similarity=0.295 Sum_probs=132.3
Q ss_pred CCCCCcceeeEecCCCCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCC
Q 046598 46 SSHFCQWRGVTCSRRHQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGA 125 (986)
Q Consensus 46 ~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 125 (986)
..+.|.|..|.|.. ++++ .+|..+. +.|+.|+|++|++++..+..|..+++|++|+|++|++++.
T Consensus 7 ~~C~C~~~~v~c~~------------~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~ 71 (220)
T 2v9t_B 7 AACTCSNNIVDCRG------------KGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISEL 71 (220)
T ss_dssp TTSEEETTEEECTT------------SCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEE
T ss_pred CCCEECCCEEEcCC------------CCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCc
Confidence 34457777777753 4444 4566554 6889999999999988888899999999999999999988
Q ss_pred CccchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhcc
Q 046598 126 IPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWL 205 (986)
Q Consensus 126 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 205 (986)
.|..|.++++|++|+|++|+|+...+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+
T Consensus 72 ~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 151 (220)
T 2v9t_B 72 APDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 151 (220)
T ss_dssp CTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred CHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCC
Confidence 88899999999999999999996666678889999999999999988888888888999999999999887777778888
Q ss_pred CCCceeeccccccc
Q 046598 206 KNLVNLTMAQNRLS 219 (986)
Q Consensus 206 ~~L~~L~L~~N~l~ 219 (986)
++|++|+|++|.+.
T Consensus 152 ~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 152 RAIQTMHLAQNPFI 165 (220)
T ss_dssp TTCCEEECCSSCEE
T ss_pred CCCCEEEeCCCCcC
Confidence 88888888888876
No 359
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=5.1e-20 Score=190.34 Aligned_cols=153 Identities=24% Similarity=0.303 Sum_probs=119.8
Q ss_pred EEeccCCCCccccCcCccCCCCCCEEEccCCCccccCC-cchhccccCceeeceecccCCCCccchhcCccccceecccc
Q 046598 66 ILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIP-SEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHN 144 (986)
Q Consensus 66 ~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 144 (986)
.++++++.++ .+|..+. ..+++|+|++|++++..| ..|..+++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 3555566666 4676654 346789999999887755 45888888888888888888777778888888888888888
Q ss_pred cccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceeeccccccccc
Q 046598 145 QLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGT 221 (986)
Q Consensus 145 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 221 (986)
++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+++.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 88877777788888888888888888877778888888888888888888877777888888888888888877643
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=7.7e-20 Score=204.60 Aligned_cols=157 Identities=27% Similarity=0.239 Sum_probs=97.8
Q ss_pred EEEecccccCCCCCcccC-CCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccC
Q 046598 432 ILYLSYNFLQGSIPSSLG-RYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFG 510 (986)
Q Consensus 432 ~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 510 (986)
.|+|++|+|++..+..|. .+++|+.|+|++|+|+ .++...+..+++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 43 ~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~-~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 121 (361)
T 2xot_A 43 LLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYN 121 (361)
T ss_dssp EEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EEECCCCCCCccChhhhhhcccccCEEECCCCcCC-ccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCC
Confidence 344444444434444454 5666666666666666 44444455666666666666666655555666667777777777
Q ss_pred ccccccCcccccCCccccEEecccccccccCCccc---cCCCCCCEEeCCCccCcccCchhhhccccc--ceeeccCCcc
Q 046598 511 NKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSL---SSLRGLSVLDLSQNNLSGKIPELLIRLQLV--KNLNLSNNDL 585 (986)
Q Consensus 511 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~l~ls~N~l 585 (986)
|+|++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|||++|+|++..+..+..++.+ +.|+|++|++
T Consensus 122 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~ 201 (361)
T 2xot_A 122 NHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPL 201 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCE
T ss_pred CcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCc
Confidence 77766666667777777777777777775433444 457777777777777776665667776653 6677777777
Q ss_pred cccc
Q 046598 586 EGVV 589 (986)
Q Consensus 586 ~~~~ 589 (986)
.+..
T Consensus 202 ~C~C 205 (361)
T 2xot_A 202 ECDC 205 (361)
T ss_dssp ECCH
T ss_pred cCCc
Confidence 6543
No 361
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=7.1e-20 Score=204.86 Aligned_cols=178 Identities=26% Similarity=0.222 Sum_probs=150.3
Q ss_pred cEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCccccc-CCCcceEEEccCCcccccCCcccccccccchhhcc
Q 046598 431 FILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIG-LSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVF 509 (986)
Q Consensus 431 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~-~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 509 (986)
+.+++++|.++ .+|..+. +.++.|+|++|+|+ .++...+. .+++|+.|+|++|+|++..+..|..+++|++|+|+
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~-~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCC-EECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCC-ccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 46777777777 4666554 46899999999999 55555565 88999999999999998777889999999999999
Q ss_pred CccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhh---hcccccceeeccCCccc
Q 046598 510 GNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELL---IRLQLVKNLNLSNNDLE 586 (986)
Q Consensus 510 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~l~ls~N~l~ 586 (986)
+|+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 999998778889999999999999999999889999999999999999999997555555 67999999999999999
Q ss_pred cccCCc-ccccc--ccceeeeCCcccccC
Q 046598 587 GVVPTQ-GVFKN--ASITSVFGNLKLCGG 612 (986)
Q Consensus 587 ~~~p~~-~~~~~--~~~~~~~~n~~lcg~ 612 (986)
+.++.. ..++. +..+.+.+||+.|++
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred ccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 876543 23333 366899999999975
No 362
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=8.2e-22 Score=232.29 Aligned_cols=226 Identities=18% Similarity=0.161 Sum_probs=156.9
Q ss_pred cceeeEecCCCCeEEEEeccCCCCcc-------------------------ccCc---CccCCCCCCEEEccCCCccccC
Q 046598 51 QWRGVTCSRRHQRVTILDLESLKLAG-------------------------SISP---HVGNLSFLKVLRLYNNSFNHEI 102 (986)
Q Consensus 51 ~w~gv~c~~~~~~v~~l~l~~~~l~~-------------------------~~~~---~~~~l~~L~~L~L~~n~l~~~~ 102 (986)
.|+++.|+....+|-.+++..-.+.- ..+. +++..++|+.|+|++|+++ .+
T Consensus 286 ~W~~~~~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~L~~L~Ls~n~L~-~L 364 (567)
T 1dce_A 286 EWRTPDGRNRPSHVWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECWCRDSATDEQLFRCELSVEKST-VL 364 (567)
T ss_dssp CCBCTTSSCCSEEEEEEECCGGGTSTTSSEEEEEEEETTTTEEEEEEEETTCSEEEEECCSTTTTSSSCCCCHHHHH-HH
T ss_pred eeccCCcccccceeEEeecCccccccccccceEEEeeccCCCCccccccCCCchhhhcccccCccceeccCChhhHH-hh
Confidence 58877777766777777765433210 1111 2356788888888888886 67
Q ss_pred CcchhccccCceeeceecc-------------cCCCCccchhcCcccccee-cccccccCccCccccCCCCCCeEEccCC
Q 046598 103 PSEFDRLRRLQVLALHYNS-------------IGGAIPANISSCSNLIQLR-LFHNQLVGKIPSELSSLSKIEHISVNDN 168 (986)
Q Consensus 103 p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 168 (986)
|..++++++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+. +|+.+.+++|
T Consensus 365 p~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~-----------~L~~l~l~~n 433 (567)
T 1dce_A 365 QSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD-----------DLRSKFLLEN 433 (567)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-----------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-----------hhhhhhhhcc
Confidence 8888888888888887775 5567777788888888887 6666543 3444445555
Q ss_pred cCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceeecccccccccCCccccCCCCccEEeccccccccccCC
Q 046598 169 NLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGAIPL 248 (986)
Q Consensus 169 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~ 248 (986)
.++...+ ..|++|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..++++++|+.|++++|.+++ +|
T Consensus 434 ~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp- 502 (567)
T 1dce_A 434 SVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD- 502 (567)
T ss_dssp HHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-
T ss_pred cccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-
Confidence 5542221 136677777777764 454 777777777777777776 667777777777777777777765 55
Q ss_pred cccccccccceEEecCceecccC-CccccCCCCCcEEecccccccCCCchhhh
Q 046598 249 DYGFSLQNLQFFSVGENQLTGAI-PPTISNASNLEIFHGSVNKLTGAAPYLEK 300 (986)
Q Consensus 249 ~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~ls~N~l~~~~~~l~~ 300 (986)
.+..+++|+.|+|++|++++.. |..++.+++|+.|++++|++++.++....
T Consensus 503 -~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 554 (567)
T 1dce_A 503 -GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQER 554 (567)
T ss_dssp -GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTH
T ss_pred -ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHH
Confidence 3346788888888888888776 88888899999999999999888775443
No 363
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=5.2e-19 Score=191.26 Aligned_cols=172 Identities=21% Similarity=0.317 Sum_probs=85.4
Q ss_pred CCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeE
Q 046598 84 NLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHI 163 (986)
Q Consensus 84 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 163 (986)
.+++|++|++++|.+... | .+..+++|++|+|++|++++..| +..+++|++|+|++|.+++ +| .+..+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEE
Confidence 444455555555555422 2 24445555555555555553322 4455555555555555543 22 24445555555
Q ss_pred EccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceeecccccccccCCccccCCCCccEEeccccccc
Q 046598 164 SVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQ 243 (986)
Q Consensus 164 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~ 243 (986)
+|++|++++. ..+.++++|++|+|++|++++. ..+..+++|++|+|++|+++
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~------------------------ 169 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS------------------------ 169 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC------------------------
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccc------------------------
Confidence 5555555432 2344445555555555555432 34444445555555555444
Q ss_pred cccCCcccccccccceEEecCceecccCCccccCCCCCcEEecccccccCC
Q 046598 244 GAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLTGA 294 (986)
Q Consensus 244 ~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~ 294 (986)
+..| +..+++|+.|++++|++++. + .+..+++|+.|++++|+++..
T Consensus 170 ~~~~---l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 170 DIVP---LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CCGG---GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEECC
T ss_pred cchh---hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccCC
Confidence 3322 23455566666666666542 2 366667777777777766643
No 364
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=2.4e-19 Score=181.06 Aligned_cols=156 Identities=24% Similarity=0.289 Sum_probs=98.3
Q ss_pred CeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCc-ccccccccchhhccCccccccCcccccCCccccEEecc
Q 046598 455 TTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPS-EVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQ 533 (986)
Q Consensus 455 ~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 533 (986)
+.+++++|+++ .+|..+. .+|+.|++++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP---LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC---TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCC---CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 55666666665 5665432 2566666666666644433 36666677777777777766666667777777777777
Q ss_pred cccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCCccccccccceeeeCCcccccCC
Q 046598 534 ENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPTQGVFKNASITSVFGNLKLCGGI 613 (986)
Q Consensus 534 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lcg~~ 613 (986)
+|+|++..|..|..+++|++|+|++|+|++..|..+..+++|++|+|++|+++|..+.......+....+.++...|+.|
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 77777666666677777777777777777666777777777777777777777665543222223333445555566654
Q ss_pred C
Q 046598 614 P 614 (986)
Q Consensus 614 ~ 614 (986)
.
T Consensus 167 ~ 167 (192)
T 1w8a_A 167 S 167 (192)
T ss_dssp T
T ss_pred h
Confidence 4
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=5.1e-19 Score=191.30 Aligned_cols=168 Identities=20% Similarity=0.306 Sum_probs=143.4
Q ss_pred CeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceec
Q 046598 62 QRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRL 141 (986)
Q Consensus 62 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 141 (986)
.+++.++++++.+... +.+..+++|++|+|++|++++..+ +.++++|++|+|++|++++ +| .+..+++|++|+|
T Consensus 46 ~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEEC
T ss_pred CcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEEC
Confidence 3588999999999854 458999999999999999997655 9999999999999999985 44 4999999999999
Q ss_pred ccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceeeccccccccc
Q 046598 142 FHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGT 221 (986)
Q Consensus 142 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 221 (986)
++|++++. ..+..+++|++|++++|++++. ..++++++|++|+|++|++++..| +..+++|++|+|++|++++
T Consensus 120 ~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~- 192 (291)
T 1h6t_A 120 EHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD- 192 (291)
T ss_dssp TTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-
T ss_pred CCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-
Confidence 99999964 5789999999999999999965 679999999999999999996555 9999999999999999984
Q ss_pred CCccccCCCCccEEeccccccc
Q 046598 222 IPSSIFNISSITGFDAGVNKIQ 243 (986)
Q Consensus 222 ~p~~l~~l~~L~~L~l~~N~l~ 243 (986)
+| .+..+++|+.|++++|.+.
T Consensus 193 l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 193 LR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CG-GGTTCTTCSEEEEEEEEEE
T ss_pred Ch-hhccCCCCCEEECcCCccc
Confidence 34 3666666666666666554
No 366
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=9.1e-19 Score=182.21 Aligned_cols=156 Identities=22% Similarity=0.189 Sum_probs=110.5
Q ss_pred ccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhcc
Q 046598 430 LFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVF 509 (986)
Q Consensus 430 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 509 (986)
.+.++.+++.++ .+|..+. ++|++|+|++|+|++..|. .+..+++|+.|+|++|+|++..+..|..+++|+.|+|+
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPG-VFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTT-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHH-HhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 445666666665 4554433 6677777777777743343 36666777777777777765545556777777777777
Q ss_pred CccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCcccccc
Q 046598 510 GNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVV 589 (986)
Q Consensus 510 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 589 (986)
+|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|++|+|++|++++..
T Consensus 97 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 77777665666777777788888888777 56777777888888888888887666667777888888888888887766
Q ss_pred C
Q 046598 590 P 590 (986)
Q Consensus 590 p 590 (986)
+
T Consensus 176 ~ 176 (229)
T 3e6j_A 176 R 176 (229)
T ss_dssp G
T ss_pred c
Confidence 5
No 367
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=6.6e-19 Score=208.66 Aligned_cols=173 Identities=21% Similarity=0.342 Sum_probs=85.1
Q ss_pred CCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeE
Q 046598 84 NLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHI 163 (986)
Q Consensus 84 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 163 (986)
.|+.|+.|+|++|.+.. +| .|..+++|+.|+|++|+|++..| +..+++|++|+|++|.+++ +| .+..+++|++|
T Consensus 41 ~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L 114 (605)
T 1m9s_A 41 ELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSL 114 (605)
T ss_dssp HHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEE
T ss_pred cCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEE
Confidence 44445555555555442 22 34455555555555555543332 4455555555555555442 22 34445555555
Q ss_pred EccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceeecccccccccCCccccCCCCccEEeccccccc
Q 046598 164 SVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQ 243 (986)
Q Consensus 164 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~ 243 (986)
+|++|.+++. ..+.++++|+.|+|++|+|++. ..|..+++|+.|+|++|++++..| +.
T Consensus 115 ~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~---------------- 172 (605)
T 1m9s_A 115 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LA---------------- 172 (605)
T ss_dssp ECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GT----------------
T ss_pred EecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hc----------------
Confidence 5555554432 2344444555555555544432 344444444444444444443322 33
Q ss_pred cccCCcccccccccceEEecCceecccCCccccCCCCCcEEecccccccCCC
Q 046598 244 GAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLTGAA 295 (986)
Q Consensus 244 ~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~ 295 (986)
.+++|+.|+|++|+|++. ..+..+++|+.|++++|++++.+
T Consensus 173 ---------~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 173 ---------GLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp ---------TCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCC
T ss_pred ---------cCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCc
Confidence 455556666666665543 34666666666666666666543
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=6.4e-22 Score=233.16 Aligned_cols=191 Identities=20% Similarity=0.227 Sum_probs=113.0
Q ss_pred cCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCcc-------------ceeecCcccccc-cccEEE-ecccccCC
Q 046598 378 GKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNR-------------FQGNIPPSIGNL-KLFILY-LSYNFLQG 442 (986)
Q Consensus 378 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-------------l~~~~~~~~~~~-~L~~L~-L~~N~l~~ 442 (986)
..+++|+.|+|++|+++ .+|..++.+++|+.|++++|. +.+.+|..+..+ +|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 44566666666666665 556666666666666665554 222333333322 244444 3333321
Q ss_pred CCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCccccc
Q 046598 443 SIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLG 522 (986)
Q Consensus 443 ~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 522 (986)
.|+.+.+++|.|+ .+|. ..|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..|+
T Consensus 424 ----------~L~~l~l~~n~i~-~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~ 483 (567)
T 1dce_A 424 ----------DLRSKFLLENSVL-KMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALA 483 (567)
T ss_dssp ----------HHHHHHHHHHHHH-HHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGG
T ss_pred ----------hhhhhhhhccccc-ccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhh
Confidence 2333444444554 2222 136667777777764 454 666667777777777776 5666677
Q ss_pred CCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccC-chhhhcccccceeeccCCccccccCCc
Q 046598 523 SCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKI-PELLIRLQLVKNLNLSNNDLEGVVPTQ 592 (986)
Q Consensus 523 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~l~ls~N~l~~~~p~~ 592 (986)
.+++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.. |..+..+++|++|+|++|++++.+|..
T Consensus 484 ~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 484 ALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp GCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred cCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 77777777777777765 45 6666777777777777776655 666777777777777777777666543
No 369
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=5e-19 Score=209.70 Aligned_cols=193 Identities=21% Similarity=0.305 Sum_probs=122.6
Q ss_pred EEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCccccc-ccccEEEecccc
Q 046598 361 VLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGN-LKLFILYLSYNF 439 (986)
Q Consensus 361 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-~~L~~L~L~~N~ 439 (986)
.+.+..+.+.+..+ +..+++|+.|++++|.++. ++ .|..+++|+.|+|++|+|++..+ +.. .+|+.|+|++|.
T Consensus 25 ~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 98 (605)
T 1m9s_A 25 KDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENK 98 (605)
T ss_dssp HHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred HHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCC
Confidence 34455555553332 4556667777777777663 22 46666777777777776665443 322 246666666666
Q ss_pred cCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcc
Q 046598 440 LQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPS 519 (986)
Q Consensus 440 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 519 (986)
|++ +| .+..+++|+.|+|++|+|+ .++. +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|+|++..|
T Consensus 99 l~~-l~-~l~~l~~L~~L~Ls~N~l~-~l~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~- 170 (605)
T 1m9s_A 99 IKD-LS-SLKDLKKLKSLSLEHNGIS-DING--LVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 170 (605)
T ss_dssp CCC-CT-TSTTCTTCCEEECTTSCCC-CCGG--GGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-
T ss_pred CCC-Ch-hhccCCCCCEEEecCCCCC-CCcc--ccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-
Confidence 653 22 5677777777777777776 3432 55667777777777777753 457777777777777777775544
Q ss_pred cccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhh
Q 046598 520 TLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLI 570 (986)
Q Consensus 520 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 570 (986)
+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++.....+.
T Consensus 171 -l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~ 218 (605)
T 1m9s_A 171 -LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQS 218 (605)
T ss_dssp -GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCS
T ss_pred -hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccc
Confidence 77777777777777777753 3567777777777777777654333333
No 370
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=9e-19 Score=185.69 Aligned_cols=137 Identities=22% Similarity=0.184 Sum_probs=106.8
Q ss_pred CCCCcccccccceeEEEEEECCCCeE--EEEEEeeccCch------------------------hHHHHHHHHHHHhcCC
Q 046598 690 FSSVNQIGEGSFGSVFKGILDDGRTT--IAVKVFNLLHHG------------------------AFKSFIAECNTLKNIR 743 (986)
Q Consensus 690 y~~~~~lg~G~~g~Vy~~~~~~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 743 (986)
|.+.+.||+|+||.||+|.+..+++. ||||+++..... ....+.+|+++++++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 66788999999999999999555788 999997532111 1136789999999998
Q ss_pred CCcc--eeeeeeccccccCCCceEEEEEEeccC-C----CHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHH
Q 046598 744 HRNL--VKILTACSGVDYQGNDFKALVFEFMHN-R----SLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYL 816 (986)
Q Consensus 744 h~ni--v~l~~~~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~L 816 (986)
|+++ ..++++ ...++||||+.+ | +|.++... .++.++..++.|++.|+.||
T Consensus 129 ~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~-------------~~~~~~~~i~~qi~~~l~~l 186 (258)
T 1zth_A 129 EAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE-------------LKELDVEGIFNDVVENVKRL 186 (258)
T ss_dssp HTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG-------------GGGSCHHHHHHHHHHHHHHH
T ss_pred hCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc-------------cChHHHHHHHHHHHHHHHHH
Confidence 8754 333332 346899999942 3 67666521 22446778999999999999
Q ss_pred H-hcCCCCeEeecCCCCCeEecCCCcEEEcccccceec
Q 046598 817 H-HDCQPPIAHCDLKPSNILLDEDMIAHIGDFGLARFL 853 (986)
Q Consensus 817 H-~~~~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 853 (986)
| +. ||+||||||+|||++. .++|+|||+|...
T Consensus 187 H~~~---givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 187 YQEA---ELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp HHTS---CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HHHC---CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9 88 9999999999999998 9999999999764
No 371
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=3.5e-18 Score=172.49 Aligned_cols=179 Identities=20% Similarity=0.242 Sum_probs=138.6
Q ss_pred ccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhcc
Q 046598 430 LFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVF 509 (986)
Q Consensus 430 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 509 (986)
-+++++++|.++ .+|..+.. +|++|++++|+|++..+..+++.+++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 10 ~~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 10 GTTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 356777788776 56765543 899999999999855444567888999999999999998889999999999999999
Q ss_pred CccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCcccccc
Q 046598 510 GNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVV 589 (986)
Q Consensus 510 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 589 (986)
+|+|++..|..|..+++|++|+|++|+|++.+|..|..+++|+.|+|++|++++..+... -...++...+..+...+..
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~-~~~~l~~~~~~~~~~~C~~ 165 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW-FAEWLRKKSLNGGAARCGA 165 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHH-HHHHHHHHCCSGGGCBBCS
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchH-HHHHHHHcCCCCCCCCCCC
Confidence 999998888889999999999999999999999999999999999999999997655321 1112333455566666655
Q ss_pred CCccccccccceeeeCCcccccCCC
Q 046598 590 PTQGVFKNASITSVFGNLKLCGGIP 614 (986)
Q Consensus 590 p~~~~~~~~~~~~~~~n~~lcg~~~ 614 (986)
|.. +......++..+.-.|....
T Consensus 166 P~~--l~~~~l~~l~~~~~~C~~~~ 188 (192)
T 1w8a_A 166 PSK--VRDVQIKDLPHSEFKCSSEN 188 (192)
T ss_dssp STT--TTTSBGGGSCTTTCCCCCC-
T ss_pred ChH--HcCCChhhCcHhhcCcCCCC
Confidence 543 44444445566666676543
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=2.8e-18 Score=174.18 Aligned_cols=151 Identities=19% Similarity=0.239 Sum_probs=87.5
Q ss_pred cCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCe
Q 046598 83 GNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEH 162 (986)
Q Consensus 83 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 162 (986)
+.+++|++|++++|.+. .+| .+..+++|++|++++|.++ . +..+..+++|++|++++|++++..|..|+.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 34555666666666665 344 4666666666666666554 2 235666666666666666666555666666666666
Q ss_pred EEccCCcCCCCcccccCCCcCcceeeccCCc-ccCcCcchhhccCCCceeecccccccccCCccccCCCCccEEeccccc
Q 046598 163 ISVNDNNLTGSIPSSLGNLSSIRSLFLSGNN-LEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNK 241 (986)
Q Consensus 163 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~ 241 (986)
|+|++|++++..|..|+++++|++|+|++|+ ++ .+| .+..+++|++|++++|++++ ++ .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 6666666665556666666666666666665 44 333 45666666666666666653 22 34444444444444443
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=4.6e-18 Score=172.51 Aligned_cols=149 Identities=15% Similarity=0.200 Sum_probs=116.7
Q ss_pred ccEEEecccccCCCCCcccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhcc
Q 046598 430 LFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVF 509 (986)
Q Consensus 430 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 509 (986)
|++|++++|.++ .+| .+..+++|++|++++|.++ .++ . +..+++|++|++++|++++..|..++.+++|++|+|+
T Consensus 46 L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~~-~-l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 46 LTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NYN-P-ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp CCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CCG-G-GTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred ccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cch-h-hhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 444444444444 444 5777888888888888776 443 3 6778889999999999987778888999999999999
Q ss_pred CccccccCcccccCCccccEEeccccc-ccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCcccc
Q 046598 510 GNKLKGEIPSTLGSCIKLEQLEMQENF-LQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEG 587 (986)
Q Consensus 510 ~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 587 (986)
+|++++..|..++.+++|++|+|++|+ ++ .+| .+..+++|+.|+|++|++++ ++ .+..+++|++|++++|++.+
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 999988788889999999999999998 65 455 68889999999999999985 44 78889999999999998865
No 374
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=4.3e-18 Score=181.00 Aligned_cols=163 Identities=20% Similarity=0.262 Sum_probs=85.5
Q ss_pred EEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceeccccc
Q 046598 66 ILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQ 145 (986)
Q Consensus 66 ~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 145 (986)
.++++.+.+++.. .+..+++|++|++++|+++. +| .+..+++|++|+|++|++++..| +..+++|++|+|++|+
T Consensus 23 ~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~ 96 (263)
T 1xeu_A 23 KQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNR 96 (263)
T ss_dssp HHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSC
T ss_pred HHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCc
Confidence 3444455544322 34555556666666665552 33 45555666666666666654333 5555666666666666
Q ss_pred ccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceeecccccccccCCcc
Q 046598 146 LVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSS 225 (986)
Q Consensus 146 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 225 (986)
+++ +|... . ++|++|+|++|++++. + .+.++++|++|+|++|++++. + .+..+++|++|+|++|++++. ..
T Consensus 97 l~~-l~~~~-~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~ 167 (263)
T 1xeu_A 97 LKN-LNGIP-S-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GG 167 (263)
T ss_dssp CSC-CTTCC-C-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TT
T ss_pred cCC-cCccc-c-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HH
Confidence 553 22221 2 5566666666655532 2 355555666666666655532 2 455555566666666655543 44
Q ss_pred ccCCCCccEEeccccccc
Q 046598 226 IFNISSITGFDAGVNKIQ 243 (986)
Q Consensus 226 l~~l~~L~~L~l~~N~l~ 243 (986)
+..+++|+.|++++|.+.
T Consensus 168 l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 168 LTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp STTCCCCCEEEEEEEEEE
T ss_pred hccCCCCCEEeCCCCccc
Confidence 445555555555555544
No 375
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=3.5e-18 Score=181.67 Aligned_cols=169 Identities=24% Similarity=0.297 Sum_probs=112.8
Q ss_pred CCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeE
Q 046598 84 NLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHI 163 (986)
Q Consensus 84 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 163 (986)
.+..+..+++++|.+++.. .+..+++|++|++++|+++ .+| .+..+++|++|+|++|++++..+ +.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4566677778888776433 5777888888888888887 445 67778888888888888875444 7778888888
Q ss_pred EccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceeecccccccccCCccccCCCCccEEeccccccc
Q 046598 164 SVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQ 243 (986)
Q Consensus 164 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~ 243 (986)
+|++|++++. |. +.. ++|++|+|++|++++ ++ .+..+++|++|+|++|++++. | .+..+++|+.|++++|.+.
T Consensus 91 ~L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKNL-NG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSCC-TT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCCc-Cc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 8888888753 33 223 778888888888774 33 577777788888888877743 3 4556666666666666555
Q ss_pred cccCCcccccccccceEEecCceec
Q 046598 244 GAIPLDYGFSLQNLQFFSVGENQLT 268 (986)
Q Consensus 244 ~~~p~~~~~~l~~L~~L~L~~N~l~ 268 (986)
+. ..+..+++|+.|++++|.++
T Consensus 164 ~~---~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 164 NT---GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp BC---TTSTTCCCCCEEEEEEEEEE
T ss_pred ch---HHhccCCCCCEEeCCCCccc
Confidence 43 22234455555555555554
No 376
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=8.3e-19 Score=213.35 Aligned_cols=189 Identities=25% Similarity=0.269 Sum_probs=95.3
Q ss_pred EccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccccccEEEecccccCCCCCcccCCCCCCCeeecCCCccCC
Q 046598 387 DMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSYNFLQGSIPSSLGRYETLTTIDLSNNNLTG 466 (986)
Q Consensus 387 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 466 (986)
+++.|.+. ..+..|..+++|+.|+|++|++....+..+...+|++|+|++|.|+ .+|..|+.+++|++|+|++|+|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 33444444 4566777777777777777777733333343345777777777777 66777777777777777777777
Q ss_pred CCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCcc-ccEEecccccccccCCccc
Q 046598 467 TIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIK-LEQLEMQENFLQGPIPSSL 545 (986)
Q Consensus 467 ~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~ 545 (986)
.+|.. ++.+++|++|+|++|.|+ .+|..|+.+++|+.|+|++|+|++.+|..+..+.. +..|+|++|.+++.+|..
T Consensus 284 ~lp~~-~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~- 360 (727)
T 4b8c_D 284 SLPAE-LGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE- 360 (727)
T ss_dssp SCCSS-GGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-
T ss_pred ccChh-hcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc-
Confidence 66666 566677777777777776 56666777777777777777777777766655432 234677777777766653
Q ss_pred cCCCCCCEEeCCCc--------cCcccCchhhhcccccceeeccCCccc
Q 046598 546 SSLRGLSVLDLSQN--------NLSGKIPELLIRLQLVKNLNLSNNDLE 586 (986)
Q Consensus 546 ~~l~~L~~L~Ls~N--------~l~~~~p~~~~~l~~L~~l~ls~N~l~ 586 (986)
|..|++++| .|.+..+..+.++..+....+++|-+.
T Consensus 361 -----l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 361 -----RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp ----------------------------------------------CCC
T ss_pred -----cceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 344555555 333333333444444444555555444
No 377
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.72 E-value=8.4e-18 Score=169.55 Aligned_cols=132 Identities=23% Similarity=0.320 Sum_probs=113.0
Q ss_pred CeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccccEEeccc
Q 046598 455 TTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQE 534 (986)
Q Consensus 455 ~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 534 (986)
+.+++++|+++ .+|..+ .++|+.|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 13 ~~l~~~~~~l~-~ip~~~---~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGI---PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TEEECTTSCCS-SCCSCC---CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCCC-cCCCCC---CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 57888888887 788653 357888999999998 6778888899999999999999977778899999999999999
Q ss_pred ccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCC
Q 046598 535 NFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPT 591 (986)
Q Consensus 535 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 591 (986)
|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+...-
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l 144 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNM 144 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcC
Confidence 999988888899999999999999999977777888999999999999999876543
No 378
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=5.7e-17 Score=159.87 Aligned_cols=137 Identities=20% Similarity=0.215 Sum_probs=108.1
Q ss_pred CCCCCEEEccCCCcc-ccCCcchhccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeE
Q 046598 85 LSFLKVLRLYNNSFN-HEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHI 163 (986)
Q Consensus 85 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 163 (986)
.+.|+.|+|++|+++ +.+|..|..+++|++|+|++|.+++. ..|..+++|++|+|++|++++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 367888888888887 67787788888888888888888855 677888888888888888887777777778888888
Q ss_pred EccCCcCCCCc-ccccCCCcCcceeeccCCcccCcCc---chhhccCCCceeecccccccccCCc
Q 046598 164 SVNDNNLTGSI-PSSLGNLSSIRSLFLSGNNLEGSIP---DTLGWLKNLVNLTMAQNRLSGTIPS 224 (986)
Q Consensus 164 ~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~~~p~ 224 (986)
+|++|++++.. +..+.++++|++|++++|.+++..+ ..|..+++|++|++++|.+. .+|.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 88888888543 2678888888888888888885544 47788888888888888876 4443
No 379
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=3.7e-17 Score=180.36 Aligned_cols=134 Identities=11% Similarity=0.145 Sum_probs=76.4
Q ss_pred cccCcCccC--CCCCCEEEccCCCccccCCcchhc-cccCceeeceecccCCCCccchhcCccccceecccccccCccCc
Q 046598 76 GSISPHVGN--LSFLKVLRLYNNSFNHEIPSEFDR-LRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPS 152 (986)
Q Consensus 76 ~~~~~~~~~--l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 152 (986)
|.++..+.. +..++.|.++++ +....-..+.. +++|++|||++|++. .....-+.++.++.+.+..|. +.+.
T Consensus 13 g~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~-~~~~~~~~~~~~~~~~~~~~~---I~~~ 87 (329)
T 3sb4_A 13 GTLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIK-MYSGKAGTYPNGKFYIYMANF---VPAY 87 (329)
T ss_dssp TCGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEEC-CEEESSSSSGGGCCEEECTTE---ECTT
T ss_pred CcHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeE-EecCccccccccccccccccc---cCHH
Confidence 344444443 667888888764 22111123333 666888888888887 111111222234555555553 2234
Q ss_pred cccC--------CCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceeeccc
Q 046598 153 ELSS--------LSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQ 215 (986)
Q Consensus 153 ~~~~--------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 215 (986)
+|.+ +++|+.|+|.+ .++.+.+.+|.++++|+.|++++|.+..+.+..|..+.++..+.+..
T Consensus 88 aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~ 157 (329)
T 3sb4_A 88 AFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGS 157 (329)
T ss_dssp TTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTC
T ss_pred HhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcc
Confidence 5555 77777777777 66655556677777777777777777656666666666666555544
No 380
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.68 E-value=1.3e-16 Score=158.84 Aligned_cols=139 Identities=22% Similarity=0.324 Sum_probs=104.9
Q ss_pred CCCCCcceeeEecCCCCeEEEEeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCC
Q 046598 46 SSHFCQWRGVTCSRRHQRVTILDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGA 125 (986)
Q Consensus 46 ~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 125 (986)
..+.|+|++|.|+.. +++ .+|..+ .+.|++|+|++|++++..+..|+.+++|++|+|++|++++.
T Consensus 3 ~~C~C~~~~l~~~~~------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 67 (177)
T 2o6r_A 3 SRCSCSGTEIRCNSK------------GLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSL 67 (177)
T ss_dssp TTCEEETTEEECCSS------------CCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCC
T ss_pred CCCEeCCCEEEecCC------------CCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEe
Confidence 345688999988643 333 344433 26788899999888877777788888888888888888866
Q ss_pred CccchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCc
Q 046598 126 IPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIP 199 (986)
Q Consensus 126 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 199 (986)
.+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|.+.+..|
T Consensus 68 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 68 PDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 66677888888888888888887666677788888888888888886666666777888888888887775433
No 381
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=5.1e-17 Score=179.25 Aligned_cols=123 Identities=10% Similarity=0.076 Sum_probs=79.7
Q ss_pred ccccCceeeceecccCCCCccchhc-Cccccceeccccccc--CccCccccCCCCCCeEEccCCcCCCCcccccCC----
Q 046598 108 RLRRLQVLALHYNSIGGAIPANISS-CSNLIQLRLFHNQLV--GKIPSELSSLSKIEHISVNDNNLTGSIPSSLGN---- 180 (986)
Q Consensus 108 ~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~---- 180 (986)
.+.+++.|.++++- ....-..+.. +++|++|||++|++. ...+.. ++.+..+.+..|.+ .+..|.+
T Consensus 23 ~~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~---~~~~~~~~~~~~~I---~~~aF~~~~~~ 95 (329)
T 3sb4_A 23 EANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGT---YPNGKFYIYMANFV---PAYAFSNVVNG 95 (329)
T ss_dssp HHHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSS---SGGGCCEEECTTEE---CTTTTEEEETT
T ss_pred hhCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCcccc---cccccccccccccc---CHHHhcccccc
Confidence 47789999998752 2111223444 778999999999987 222222 22345555655533 2445666
Q ss_pred ----CcCcceeeccCCcccCcCcchhhccCCCceeecccccccccCCccccCCCCccEEecc
Q 046598 181 ----LSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAG 238 (986)
Q Consensus 181 ----l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~ 238 (986)
+++|+.|+|.+ .++.+.+.+|.++++|+.|++++|.++...+..|.++.++..+..+
T Consensus 96 ~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~ 156 (329)
T 3sb4_A 96 VTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLG 156 (329)
T ss_dssp EEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTT
T ss_pred cccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCc
Confidence 88888888888 7776777778888888888888888875555666665555544443
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.1e-16 Score=157.71 Aligned_cols=136 Identities=19% Similarity=0.171 Sum_probs=104.0
Q ss_pred CCCCeeecCCCccC-CCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccccEE
Q 046598 452 ETLTTIDLSNNNLT-GTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQL 530 (986)
Q Consensus 452 ~~L~~L~L~~N~l~-~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 530 (986)
++|+.|++++|+++ +.+|.. +..+++|+.|++++|.|++. ..+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGL-TAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSC-CGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHHH-HHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 56777888888776 666665 56677788888888888754 667778888888888888886677777778888888
Q ss_pred ecccccccccC-CccccCCCCCCEEeCCCccCcccCc---hhhhcccccceeeccCCccccccC
Q 046598 531 EMQENFLQGPI-PSSLSSLRGLSVLDLSQNNLSGKIP---ELLIRLQLVKNLNLSNNDLEGVVP 590 (986)
Q Consensus 531 ~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~l~ls~N~l~~~~p 590 (986)
+|++|+|++.. +..+..+++|+.|+|++|++++..+ ..+..+++|++|++++|.+...+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 164 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPD 164 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCCS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhccc
Confidence 88888887542 2678888888888888888886555 478888888888888888876544
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=2.6e-16 Score=156.60 Aligned_cols=134 Identities=25% Similarity=0.275 Sum_probs=102.6
Q ss_pred CCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccccEEecc
Q 046598 454 LTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQ 533 (986)
Q Consensus 454 L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 533 (986)
.+.+++++|+++ .+|..+ .++|+.|++++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 9 ~~~l~~~~~~l~-~~p~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI---PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCCc-cCCCCC---CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 466777777776 666542 3567888888888876555667778888888888888876666667888888888888
Q ss_pred cccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeeccCCccccccCC
Q 046598 534 ENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEGVVPT 591 (986)
Q Consensus 534 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 591 (986)
+|+|++..+..+..+++|++|+|++|+|++..+..+..+++|++|+|++|+++|.+|.
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 8888877667778888888888888888876666677888888888888888887764
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1.1e-16 Score=154.42 Aligned_cols=127 Identities=20% Similarity=0.230 Sum_probs=80.1
Q ss_pred CCCCEEEccCCCcc-ccCCcchhccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEE
Q 046598 86 SFLKVLRLYNNSFN-HEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHIS 164 (986)
Q Consensus 86 ~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 164 (986)
++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 55666666666666 56666666666666666666666644 5566666666666666666655666666666666666
Q ss_pred ccCCcCCCC-cccccCCCcCcceeeccCCcccCcCc---chhhccCCCceeecc
Q 046598 165 VNDNNLTGS-IPSSLGNLSSIRSLFLSGNNLEGSIP---DTLGWLKNLVNLTMA 214 (986)
Q Consensus 165 L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~ 214 (986)
+++|++++. .+..++++++|++|++++|.+++..+ ..+..+++|++|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666642 23556666666666666666664443 356666666666654
No 385
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=5.1e-16 Score=156.48 Aligned_cols=125 Identities=21% Similarity=0.299 Sum_probs=72.5
Q ss_pred EeccCCCCccccCcCccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceecccccc
Q 046598 67 LDLESLKLAGSISPHVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQL 146 (986)
Q Consensus 67 l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 146 (986)
+++++++++ .+|..+. +.|++|+|++|+++ .+|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 334445555 4554432 45666666666665 4556666666666666666666655555566666666666666666
Q ss_pred cCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCccc
Q 046598 147 VGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLE 195 (986)
Q Consensus 147 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 195 (986)
++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|.+.
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 6555555555555555555555555444444555555555555555554
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=1.8e-16 Score=152.87 Aligned_cols=128 Identities=19% Similarity=0.236 Sum_probs=90.8
Q ss_pred CCCCeeecCCCccC-CCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccccEE
Q 046598 452 ETLTTIDLSNNNLT-GTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQL 530 (986)
Q Consensus 452 ~~L~~L~L~~N~l~-~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 530 (986)
++|+.|++++|+++ +.+|.. +..+++|+.|++++|++++. ..+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGL-TDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSC-CTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHHH-HhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 45667777777766 556654 55666777777777777643 566777777777777777776677777777777777
Q ss_pred eccccccccc-CCccccCCCCCCEEeCCCccCcccCc---hhhhcccccceeeccC
Q 046598 531 EMQENFLQGP-IPSSLSSLRGLSVLDLSQNNLSGKIP---ELLIRLQLVKNLNLSN 582 (986)
Q Consensus 531 ~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~l~ls~ 582 (986)
++++|++++. .+..+..+++|+.|++++|++++..+ ..+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 7777777753 34677778888888888888876555 5677788888887764
No 387
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=2.6e-16 Score=172.35 Aligned_cols=146 Identities=13% Similarity=0.099 Sum_probs=99.0
Q ss_pred CCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCc--------------hhHHHHHHHHHHHhcCCCCcceeeeeec
Q 046598 689 RFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH--------------GAFKSFIAECNTLKNIRHRNLVKILTAC 754 (986)
Q Consensus 689 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~l~~~~ 754 (986)
-|.+.++||+|++|.||+|.+.. |+.||||+++.... ........+.++.....|+|+.+++...
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~-G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEK-GKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTT-CCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEecCEeeeCCceEEEEEECCC-CCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 48999999999999999999875 88999999753110 0011222223332223344444433221
Q ss_pred cccc-cCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCC
Q 046598 755 SGVD-YQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSN 833 (986)
Q Consensus 755 ~~~~-~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~N 833 (986)
.... .......++||||++|++|.++.. . .+...++.|++.++.|||+. |||||||||.|
T Consensus 175 v~vp~p~~~~~~~LVME~i~G~~L~~l~~--------------~--~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~N 235 (397)
T 4gyi_A 175 FPVPEPIAQSRHTIVMSLVDALPMRQVSS--------------V--PDPASLYADLIALILRLAKH---GLIHGDFNEFN 235 (397)
T ss_dssp CSCCCEEEEETTEEEEECCSCEEGGGCCC--------------C--SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTS
T ss_pred CCCCeeeeccCceEEEEecCCccHhhhcc--------------c--HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHH
Confidence 0000 000022379999999998876542 0 12356889999999999999 99999999999
Q ss_pred eEecCCC----------cEEEcccccceecC
Q 046598 834 ILLDEDM----------IAHIGDFGLARFLP 854 (986)
Q Consensus 834 Ill~~~~----------~~kL~DFG~a~~~~ 854 (986)
||+++++ .+.|+||+.+....
T Consensus 236 ILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 236 ILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred EEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 9998776 38999999987643
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=3.4e-17 Score=166.23 Aligned_cols=130 Identities=25% Similarity=0.359 Sum_probs=68.6
Q ss_pred EEEEeccCCCCccccCc------CccCCCCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCcccc
Q 046598 64 VTILDLESLKLAGSISP------HVGNLSFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLI 137 (986)
Q Consensus 64 v~~l~l~~~~l~~~~~~------~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 137 (986)
++.++++.+.+.|.+|+ .+..+++|++|+|++|++++ +| .|.++++|++|+|++|+++ .+|..+..+++|+
T Consensus 20 l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~ 96 (198)
T 1ds9_A 20 VVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLE 96 (198)
T ss_dssp CCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCS
T ss_pred ccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCC
Confidence 44455555555555544 55555555555555555554 34 5555555555555555555 4455555555555
Q ss_pred ceecccccccCccCccccCCCCCCeEEccCCcCCCCcc-cccCCCcCcceeeccCCcccCcC
Q 046598 138 QLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIP-SSLGNLSSIRSLFLSGNNLEGSI 198 (986)
Q Consensus 138 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~ 198 (986)
+|+|++|++++ +| .+..+++|++|++++|++++..+ ..+.++++|++|++++|.+++..
T Consensus 97 ~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 156 (198)
T 1ds9_A 97 ELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDY 156 (198)
T ss_dssp EEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHH
T ss_pred EEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccc
Confidence 55555555553 33 35555555555555555553221 24555555555555555554433
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=3e-17 Score=166.63 Aligned_cols=138 Identities=23% Similarity=0.282 Sum_probs=101.6
Q ss_pred ccCCCCCCEEEccCCCccccCCc------chhccccCceeeceecccCCCCccchhcCccccceecccccccCccCcccc
Q 046598 82 VGNLSFLKVLRLYNNSFNHEIPS------EFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELS 155 (986)
Q Consensus 82 ~~~l~~L~~L~L~~n~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 155 (986)
+.....++.++++.+.+.+.+|. .|..+++|++|+|++|++++ +| .+..+++|++|+|++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 44556677777777777777766 78888888888888888875 56 7778888888888888887 5677777
Q ss_pred CCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCc-chhhccCCCceeecccccccccCCc
Q 046598 156 SLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIP-DTLGWLKNLVNLTMAQNRLSGTIPS 224 (986)
Q Consensus 156 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~ 224 (986)
.+++|++|+|++|++++ +| .+.++++|++|+|++|++++..+ ..+..+++|++|++++|++++.+|.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 77788888888888774 44 57777778888888887774322 4677777777777777777765554
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=2e-15 Score=149.91 Aligned_cols=133 Identities=14% Similarity=0.138 Sum_probs=89.3
Q ss_pred CccCCCCCCEEEccCCCccccCCcchhccc-cCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCC
Q 046598 81 HVGNLSFLKVLRLYNNSFNHEIPSEFDRLR-RLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSK 159 (986)
Q Consensus 81 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 159 (986)
.+.+.+.|+.|+|++|+++. +|. +..+. +|++|+|++|++++. ..|+.+++|++|+|++|++++..+..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 35566777777777777773 343 44444 777777777777754 56777777777777777777544445577777
Q ss_pred CCeEEccCCcCCCCccc--ccCCCcCcceeeccCCcccCcCcch----hhccCCCceeeccccccc
Q 046598 160 IEHISVNDNNLTGSIPS--SLGNLSSIRSLFLSGNNLEGSIPDT----LGWLKNLVNLTMAQNRLS 219 (986)
Q Consensus 160 L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~L~~N~l~ 219 (986)
|++|+|++|+++ .+|. .+.++++|++|++++|.++ .+|.. +..+++|+.|++++|.+.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 777777777775 4444 6677777777777777776 44543 667777777777777654
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=2.2e-15 Score=149.68 Aligned_cols=137 Identities=18% Similarity=0.188 Sum_probs=109.5
Q ss_pred ccCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCcc
Q 046598 447 SLGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIK 526 (986)
Q Consensus 447 ~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 526 (986)
.+.++++|+.|++++|+++ .+|. +....++|+.|++++|+|++. ..|..+++|++|+|++|+|++..+..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 4566778888888888888 5654 344445889999999998864 67888899999999999998655555688999
Q ss_pred ccEEecccccccccCCc--cccCCCCCCEEeCCCccCcccCch----hhhcccccceeeccCCcccccc
Q 046598 527 LEQLEMQENFLQGPIPS--SLSSLRGLSVLDLSQNNLSGKIPE----LLIRLQLVKNLNLSNNDLEGVV 589 (986)
Q Consensus 527 L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~l~ls~N~l~~~~ 589 (986)
|++|+|++|+|+ .+|. .+..+++|+.|+|++|+++ .+|. .+..+++|+.||+++|.+....
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~~~ 156 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKERQ 156 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHHHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHHHH
Confidence 999999999997 4555 7888999999999999998 4565 4888999999999999887543
No 392
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.56 E-value=5.5e-14 Score=158.21 Aligned_cols=268 Identities=9% Similarity=0.048 Sum_probs=141.0
Q ss_pred CCCCEEEccCCCccccCCcchhccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEc
Q 046598 86 SFLKVLRLYNNSFNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISV 165 (986)
Q Consensus 86 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 165 (986)
..++.+.+.+ .++.+.+.+|.++ +|+.+.|..| ++.+-..+|.++ +|+.+.+.. .++.+.+.+|.++++|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4555555543 3444555566664 5666766655 554444556553 566666664 455455566666666666666
Q ss_pred cCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceeecccccccccCCccccCCCCccEEeccccccccc
Q 046598 166 NDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAGVNKIQGA 245 (986)
Q Consensus 166 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~ 245 (986)
.+|+++......|. .++|+.+.|.++ ++.+...+|.++++|+.++|..| ++ .
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~-------------------------~ 239 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VS-------------------------T 239 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CC-------------------------E
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-cc-------------------------C
Confidence 66666644444444 366666666633 55455566666666666666553 33 2
Q ss_pred cCCcccccccccceEEecCceecccCCccccCCCCCcEEecccccccCCCchhhhhhhHhhhhhccCCCCCCCCCCcccc
Q 046598 246 IPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLTGAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFL 325 (986)
Q Consensus 246 ~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l 325 (986)
++...|.+ .+|+.+.+. +.++......|.++++|+.+++..|.+.....
T Consensus 240 I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~----------------------------- 288 (401)
T 4fdw_A 240 IGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPE----------------------------- 288 (401)
T ss_dssp ECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTT-----------------------------
T ss_pred cccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcc-----------------------------
Confidence 22333322 345555552 33443445556666666666655554431000
Q ss_pred cccccccccceeeccccccccCCCcccccccccceEEEccCCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCC
Q 046598 326 CSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQ 405 (986)
Q Consensus 326 ~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 405 (986)
..++...+....+|+.+.|. +.++.+...+|.++++|+.++|..| ++.+...+|.++
T Consensus 289 --------------------~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~- 345 (401)
T 4fdw_A 289 --------------------AMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT- 345 (401)
T ss_dssp --------------------CEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-
T ss_pred --------------------cEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-
Confidence 01111122222344444444 2344445556666666666666443 444555566666
Q ss_pred CCCEEEccCccceeecCcccccc--cccEEEeccccc
Q 046598 406 NLKDLRLQRNRFQGNIPPSIGNL--KLFILYLSYNFL 440 (986)
Q Consensus 406 ~L~~L~Ls~N~l~~~~~~~~~~~--~L~~L~L~~N~l 440 (986)
+|+.+++++|.+....+..|... .+..|++..+.+
T Consensus 346 ~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 346 GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 66666666666655555555443 355666665554
No 393
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.53 E-value=2.1e-13 Score=153.45 Aligned_cols=265 Identities=12% Similarity=0.114 Sum_probs=154.4
Q ss_pred CccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCcchhhccCCCceee
Q 046598 133 CSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPDTLGWLKNLVNLT 212 (986)
Q Consensus 133 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 212 (986)
+..++.+.+.+ .++.+.+.+|.+. +|+.+.+.+| ++.+...+|.+ .+|+.+.+.+ .++.+.+..|.++++|+.++
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 35555555543 3443445566653 5666666655 54444555655 3566666664 45545556666666677777
Q ss_pred cccccccccCCccccCCCCccEEeccccccccccCCcccccccccceEEecCceecccCCccccCCCCCcEEeccccccc
Q 046598 213 MAQNRLSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGAIPPTISNASNLEIFHGSVNKLT 292 (986)
Q Consensus 213 L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 292 (986)
|++|+++ .+|...+..++|+.+.+..+ ++..-...|.++++|+.+++..| ++
T Consensus 187 l~~n~l~-~I~~~aF~~~~L~~l~lp~~--------------------------l~~I~~~aF~~~~~L~~l~l~~~-l~ 238 (401)
T 4fdw_A 187 LSKTKIT-KLPASTFVYAGIEEVLLPVT--------------------------LKEIGSQAFLKTSQLKTIEIPEN-VS 238 (401)
T ss_dssp CTTSCCS-EECTTTTTTCCCSEEECCTT--------------------------CCEECTTTTTTCTTCCCEECCTT-CC
T ss_pred cCCCcce-EechhhEeecccCEEEeCCc--------------------------hheehhhHhhCCCCCCEEecCCC-cc
Confidence 7666666 33333333445555444422 33333444555555555554432 11
Q ss_pred CCCchhhhhhhHhhhhhccCCCCCCCCCCcccccccccccccceeeccccccccCCCcccccccccceEEEccCCccccc
Q 046598 293 GAAPYLEKLQRLLVFGILGNSLGSRGDRDLNFLCSLTNATRLKWLLININNFGGSLPACISNLSTTLEVLLLDNNQIFGN 372 (986)
Q Consensus 293 ~~~~~l~~l~~L~~l~l~~n~l~~~~~~~l~~l~~l~~~~~L~~l~l~~n~~~~~~p~~~~~~~~~L~~L~L~~n~l~~~ 372 (986)
.+ +...+.. .+|+.+.+ .+.++.+
T Consensus 239 ~I------------------------------------------------------~~~aF~~-~~L~~i~l-p~~i~~I 262 (401)
T 4fdw_A 239 TI------------------------------------------------------GQEAFRE-SGITTVKL-PNGVTNI 262 (401)
T ss_dssp EE------------------------------------------------------CTTTTTT-CCCSEEEE-ETTCCEE
T ss_pred Cc------------------------------------------------------ccccccc-CCccEEEe-CCCccEE
Confidence 11 0111111 23444444 2344545
Q ss_pred CCccccCCCCCCEEEccCcccc-----CcCCCcccCCCCCCEEEccCccceeecCccccc-ccccEEEecccccCCCCCc
Q 046598 373 IPAAIGKFVNLQRLDMCSNRLS-----GTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGN-LKLFILYLSYNFLQGSIPS 446 (986)
Q Consensus 373 ~~~~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-~~L~~L~L~~N~l~~~~p~ 446 (986)
...+|.++++|+.+++.+|.+. .+.+.+|.++++|+.+.|. +.++......|.. .+|+.+.|..| ++.+.+.
T Consensus 263 ~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~ 340 (401)
T 4fdw_A 263 ASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFS 340 (401)
T ss_dssp CTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTT
T ss_pred ChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHH
Confidence 5667777777777777776654 3555677777777777777 3466666666665 35777777554 6656677
Q ss_pred ccCCCCCCCeeecCCCccCCCCCcccccCC-CcceEEEccCCccc
Q 046598 447 SLGRYETLTTIDLSNNNLTGTIPPQFIGLS-SSLIVLDLSRNQLT 490 (986)
Q Consensus 447 ~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~-~~L~~L~Ls~N~l~ 490 (986)
+|.++ +|+.+++++|.+. .++...|..+ .+++.|++..+.+.
T Consensus 341 aF~~~-~L~~l~l~~n~~~-~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 341 AFNNT-GIKEVKVEGTTPP-QVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp SSSSS-CCCEEEECCSSCC-BCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred hCCCC-CCCEEEEcCCCCc-ccccccccCCCCCccEEEeCHHHHH
Confidence 88888 8999999988887 5655556555 47888888887665
No 394
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.52 E-value=1.4e-13 Score=155.74 Aligned_cols=67 Identities=10% Similarity=0.070 Sum_probs=33.5
Q ss_pred ccccCCcchhccccCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEcc
Q 046598 98 FNHEIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVN 166 (986)
Q Consensus 98 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 166 (986)
++.+-..+|.++++|+.+.|.. .++.+-..+|.++++|+.++|.++ ++.+...+|.++.+|+.+.+.
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p 125 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLP 125 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred EeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhccc
Confidence 3334445566666666666643 244333445555555555555433 332333455555555554443
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=2e-14 Score=141.61 Aligned_cols=90 Identities=19% Similarity=0.271 Sum_probs=44.1
Q ss_pred cccchhhccCccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCCccCcccCchhhhcccccceeec
Q 046598 501 KNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIRLQLVKNLNL 580 (986)
Q Consensus 501 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l 580 (986)
++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 34444444444444444444444444444444444444444444455555555555555555444444555555555555
Q ss_pred cCCccccccC
Q 046598 581 SNNDLEGVVP 590 (986)
Q Consensus 581 s~N~l~~~~p 590 (986)
++|++++.++
T Consensus 110 ~~N~~~c~c~ 119 (170)
T 3g39_A 110 LNNPWDCACS 119 (170)
T ss_dssp CSSCBCTTBG
T ss_pred CCCCCCCCch
Confidence 5555555444
No 396
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.51 E-value=3.1e-13 Score=152.91 Aligned_cols=113 Identities=10% Similarity=0.005 Sum_probs=66.4
Q ss_pred ccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeeccCCcccCcCcc
Q 046598 121 SIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNLEGSIPD 200 (986)
Q Consensus 121 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 200 (986)
.++.+-..+|.++++|+.+.|..+ ++.+...+|.++++|+.+++.++ ++......|.++++|+.+.+..+ +......
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~ 134 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVE 134 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecce
Confidence 344444567888888888888643 66555677888888888888655 55455567777778877776654 3334555
Q ss_pred hhhccCCCceeecccccccccCCccccCCCCccEEecc
Q 046598 201 TLGWLKNLVNLTMAQNRLSGTIPSSIFNISSITGFDAG 238 (986)
Q Consensus 201 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~ 238 (986)
.|.....++........ ......|.++++|+.+.+.
T Consensus 135 aF~~~~~~~~~~~~~~~--~i~~~aF~~c~~L~~i~l~ 170 (394)
T 4fs7_A 135 AFKGCDFKEITIPEGVT--VIGDEAFATCESLEYVSLP 170 (394)
T ss_dssp TTTTCCCSEEECCTTCC--EECTTTTTTCTTCCEEECC
T ss_pred eeecccccccccCcccc--ccchhhhcccCCCcEEecC
Confidence 56555433333222221 1223344555555555544
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.49 E-value=4.4e-14 Score=139.54 Aligned_cols=104 Identities=25% Similarity=0.321 Sum_probs=51.6
Q ss_pred CeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccccEEeccc
Q 046598 455 TTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQE 534 (986)
Q Consensus 455 ~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 534 (986)
+.+++++|+++ .+|..+ .++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~~---~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGI---PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCCCc---CCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 45556666554 555442 14455555555555544455555555555555555555533333344444555555555
Q ss_pred ccccccCCccccCCCCCCEEeCCCccCc
Q 046598 535 NFLQGPIPSSLSSLRGLSVLDLSQNNLS 562 (986)
Q Consensus 535 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 562 (986)
|+|++..+..|..+++|+.|+|++|+++
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc
Confidence 5544333333444444444444444444
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=8.6e-14 Score=136.97 Aligned_cols=109 Identities=25% Similarity=0.291 Sum_probs=96.3
Q ss_pred CCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccccEEec
Q 046598 453 TLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEM 532 (986)
Q Consensus 453 ~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 532 (986)
..+.+++++|+++ .+|..+ .++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~---~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 85 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGI---PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSL 85 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEEeCCCCcC-ccCccC---CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEEC
Confidence 3578899999998 788763 378999999999999887888999999999999999999777777899999999999
Q ss_pred ccccccccCCccccCCCCCCEEeCCCccCcccC
Q 046598 533 QENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKI 565 (986)
Q Consensus 533 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 565 (986)
++|+|++..+..|..+++|+.|+|++|+++...
T Consensus 86 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 86 NDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 999999877778999999999999999998653
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=1.6e-13 Score=135.50 Aligned_cols=85 Identities=26% Similarity=0.335 Sum_probs=40.0
Q ss_pred cCceeeceecccCCCCccchhcCccccceecccccccCccCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeecc
Q 046598 111 RLQVLALHYNSIGGAIPANISSCSNLIQLRLFHNQLVGKIPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFLS 190 (986)
Q Consensus 111 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 190 (986)
+|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 34 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~ 113 (174)
T 2r9u_A 34 DKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLY 113 (174)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECC
T ss_pred CCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeC
Confidence 34444444444443334444444444444444444443333334445555555555555554433445555555555555
Q ss_pred CCccc
Q 046598 191 GNNLE 195 (986)
Q Consensus 191 ~N~l~ 195 (986)
+|.+.
T Consensus 114 ~N~~~ 118 (174)
T 2r9u_A 114 NNPWD 118 (174)
T ss_dssp SSCBC
T ss_pred CCCcc
Confidence 55554
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.35 E-value=1.4e-11 Score=139.17 Aligned_cols=107 Identities=19% Similarity=0.297 Sum_probs=43.0
Q ss_pred cCCCCCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccc
Q 046598 448 LGRYETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKL 527 (986)
Q Consensus 448 ~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 527 (986)
|.+++.|+.+.+. +.++ .|+...|..+.+|+.+++..+ ++.+....|.++.+|+.+.+..+ ++..-..+|.++.+|
T Consensus 284 F~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L 359 (394)
T 4gt6_A 284 FMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTAL 359 (394)
T ss_dssp TTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTC
T ss_pred cccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCC
Confidence 3344444444443 2233 344444444445555554432 33233344555555555555433 332333445555555
Q ss_pred cEEecccccccccCCccccCCCCCCEEeCCCccC
Q 046598 528 EQLEMQENFLQGPIPSSLSSLRGLSVLDLSQNNL 561 (986)
Q Consensus 528 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 561 (986)
+.+++.+|.... ..+....+|+.+.+..|.+
T Consensus 360 ~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 360 NNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp CEEEESSCHHHH---HTCBCCCCC----------
T ss_pred CEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 555555544331 2344445555555544433
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.32 E-value=1.3e-12 Score=145.15 Aligned_cols=132 Identities=17% Similarity=0.147 Sum_probs=82.9
Q ss_pred eeecCCC-ccCCCCCcccccCCCcceEEEccC-CcccccCCcccccccccchhhccCccccccCcccccCCccccEEecc
Q 046598 456 TIDLSNN-NLTGTIPPQFIGLSSSLIVLDLSR-NQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQ 533 (986)
Q Consensus 456 ~L~L~~N-~l~~~ip~~~~~~~~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 533 (986)
.++++++ +|+ .+|. +..+++|+.|+|++ |+|++..+..|.++++|+.|+|++|+|++..|..|.++++|++|+|+
T Consensus 12 ~v~~~~~n~l~-~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp CEECCSSCCCT-TTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred EEEcCCCCCCC-ccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 4577776 776 5666 56666777777775 77776666667777777777777777777666677777777777777
Q ss_pred cccccccCCccccCCCCCCEEeCCCccCcccCc-hhhhcccccceeeccCCccccccCC
Q 046598 534 ENFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIP-ELLIRLQLVKNLNLSNNDLEGVVPT 591 (986)
Q Consensus 534 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~l~ls~N~l~~~~p~ 591 (986)
+|+|++..+..|..++ |+.|+|++|++...-. .+|..+.......+..+.+++..|.
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 7777765555555554 7777777777763221 2233333333334444555555444
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.32 E-value=3.4e-14 Score=158.35 Aligned_cols=137 Identities=16% Similarity=0.144 Sum_probs=89.5
Q ss_pred CCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCccc-----ccccccchhhccCccccc----cCccccc
Q 046598 452 ETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEV-----GNLKNLEILNVFGNKLKG----EIPSTLG 522 (986)
Q Consensus 452 ~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~----~~p~~~~ 522 (986)
++|+.|+|++|.|+......+...+++|+.|+|++|+|+......+ ...++|++|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 4666777777766532222333334567777777777764433333 234667778888887764 2444556
Q ss_pred CCccccEEecccccccccC----CccccCCCCCCEEeCCCccCccc----CchhhhcccccceeeccCCccccc
Q 046598 523 SCIKLEQLEMQENFLQGPI----PSSLSSLRGLSVLDLSQNNLSGK----IPELLIRLQLVKNLNLSNNDLEGV 588 (986)
Q Consensus 523 ~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~l~ls~N~l~~~ 588 (986)
.+++|++|+|++|.|++.. +..+...++|+.|+|++|.|+.. ++..+...++|++|+|++|+|+..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 7778888888888887532 45566777888888888888753 344455668888888888888753
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=3.5e-12 Score=141.69 Aligned_cols=107 Identities=24% Similarity=0.194 Sum_probs=86.3
Q ss_pred EEEccCC-cccccCCcccccccccchhhccC-ccccccCcccccCCccccEEecccccccccCCccccCCCCCCEEeCCC
Q 046598 481 VLDLSRN-QLTGSIPSEVGNLKNLEILNVFG-NKLKGEIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLRGLSVLDLSQ 558 (986)
Q Consensus 481 ~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 558 (986)
.++++++ +|+ .+|. +..+++|+.|+|++ |+|++..|..|.++++|+.|+|++|+|++.+|..|.+|++|+.|||++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4678887 887 4777 88888888888886 888877777888888888888888888888888888888888888888
Q ss_pred ccCcccCchhhhcccccceeeccCCccccccC
Q 046598 559 NNLSGKIPELLIRLQLVKNLNLSNNDLEGVVP 590 (986)
Q Consensus 559 N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 590 (986)
|+|++..+..+..++ |+.|+|++|+|.+...
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCA 120 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGG
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCc
Confidence 888876666666665 8888888888887654
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.27 E-value=1.7e-13 Score=152.60 Aligned_cols=135 Identities=19% Similarity=0.163 Sum_probs=75.7
Q ss_pred CCCCEEEccCCCccccCCcchhcc-----ccCceeeceecccCCCCccch-hcCccccceecccccccCccCccc-----
Q 046598 86 SFLKVLRLYNNSFNHEIPSEFDRL-----RRLQVLALHYNSIGGAIPANI-SSCSNLIQLRLFHNQLVGKIPSEL----- 154 (986)
Q Consensus 86 ~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~----- 154 (986)
+.|+.|+|++|.++......|... ++|++|+|++|.++......+ ..+++|++|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 456677777777664444444333 567777777776653322222 245566677777776654433333
Q ss_pred cCCCCCCeEEccCCcCCC----CcccccCCCcCcceeeccCCcccCc----CcchhhccCCCceeecccccccc
Q 046598 155 SSLSKIEHISVNDNNLTG----SIPSSLGNLSSIRSLFLSGNNLEGS----IPDTLGWLKNLVNLTMAQNRLSG 220 (986)
Q Consensus 155 ~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~ 220 (986)
...++|++|+|++|.++. .++..+..+++|++|+|++|.|+.. ++..+...++|++|+|++|.+++
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 234566666666666653 1333445566666666666666532 23444555666666666666653
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.26 E-value=3.2e-10 Score=128.07 Aligned_cols=134 Identities=16% Similarity=0.148 Sum_probs=66.2
Q ss_pred cCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccccccEEEecccccCCCCCcccCCC
Q 046598 372 NIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSYNFLQGSIPSSLGRY 451 (986)
Q Consensus 372 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l 451 (986)
+...+|..+.+|+.+.+.++..+ +...+|.++++|+.+.+. +.++..... +|.++
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~-----------------------aF~~c 310 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPES-----------------------VFAGC 310 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTT-----------------------TTTTC
T ss_pred cccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCce-----------------------eecCC
Confidence 44567788888888888766554 666777788888877775 334433333 34444
Q ss_pred CCCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccccEEe
Q 046598 452 ETLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLE 531 (986)
Q Consensus 452 ~~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 531 (986)
.+|+.+++..+ ++ .|....|..+.+|+.+.+..+ ++.+....|.++++|+.+++.+|.... ..+....+|+.+.
T Consensus 311 ~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~ 384 (394)
T 4gt6_A 311 ISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLP 384 (394)
T ss_dssp TTCCEEECCTT-CC-EECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----
T ss_pred CCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEE
Confidence 44444444432 33 344444444445555555332 333333445555555555555444321 2344445555555
Q ss_pred ccccc
Q 046598 532 MQENF 536 (986)
Q Consensus 532 L~~N~ 536 (986)
+..|.
T Consensus 385 i~~~~ 389 (394)
T 4gt6_A 385 VAPGS 389 (394)
T ss_dssp -----
T ss_pred eCCCC
Confidence 54443
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.23 E-value=2e-11 Score=129.60 Aligned_cols=149 Identities=15% Similarity=0.130 Sum_probs=113.9
Q ss_pred HHHHhhcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCC-CCcceeeeeeccccccC
Q 046598 682 NLYNATDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQ 760 (986)
Q Consensus 682 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 760 (986)
.+....+.|.+....+.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++ .
T Consensus 8 ~l~~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~-----~ 80 (263)
T 3tm0_A 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFE-----R 80 (263)
T ss_dssp HHHHHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEE-----E
T ss_pred HHHHHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEE-----e
Confidence 34455678988889999999999999764 5789999987532233356888999998884 67788888874 3
Q ss_pred CCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhc---------------------
Q 046598 761 GNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHD--------------------- 819 (986)
Q Consensus 761 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--------------------- 819 (986)
..+..|+||||++|.++.+... +..+...++.+++++++.||+.
T Consensus 81 ~~~~~~lv~e~i~G~~l~~~~~---------------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~ 145 (263)
T 3tm0_A 81 HDGWSNLLMSEADGVLCSEEYE---------------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYL 145 (263)
T ss_dssp ETTEEEEEEECCSSEEHHHHCC---------------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHH
T ss_pred cCCceEEEEEecCCeehhhccC---------------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHH
Confidence 4577899999999999987642 1112346889999999999981
Q ss_pred -----------------------------------CCCCeEeecCCCCCeEecCCCcEEEccccccee
Q 046598 820 -----------------------------------CQPPIAHCDLKPSNILLDEDMIAHIGDFGLARF 852 (986)
Q Consensus 820 -----------------------------------~~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~ 852 (986)
..+.++|||++|.||+++++..+.|+||+.+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 146 LNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp HHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 013699999999999998766677999998853
No 407
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.00 E-value=4.7e-12 Score=132.14 Aligned_cols=24 Identities=17% Similarity=0.115 Sum_probs=17.5
Q ss_pred CCCcceeeEecCCCCeEEEEeccC
Q 046598 48 HFCQWRGVTCSRRHQRVTILDLES 71 (986)
Q Consensus 48 ~~c~w~gv~c~~~~~~v~~l~l~~ 71 (986)
..|+|.|+.|+....+|+.+-..+
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~ 99 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSS 99 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEEC
T ss_pred HHHhcCcEEECCCCCEEEEEEecC
Confidence 358999999998766776665443
No 408
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.97 E-value=4.2e-10 Score=119.29 Aligned_cols=139 Identities=18% Similarity=0.090 Sum_probs=97.0
Q ss_pred hcCCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCc--ceeeeeeccccccCCCce
Q 046598 687 TDRFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRN--LVKILTACSGVDYQGNDF 764 (986)
Q Consensus 687 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~~~~ 764 (986)
...|.+....+.|..+.||++... ++..+++|+.... ....+.+|+++++.+.+.. +.+++++. ..++.
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~~-~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~-----~~~~~ 89 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVV-----TEAGR 89 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEECT-TSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEE-----ECSSC
T ss_pred cCCCceEecccCCCCceEEEEecC-CCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEec-----cCCCC
Confidence 344554333345666999999764 3677999997543 2355778999998885434 45577763 33466
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcC------------------------
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDC------------------------ 820 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------------------------ 820 (986)
.++||||++|.++. ... .+ ...++.++++.+..||+..
T Consensus 90 ~~~v~e~i~G~~l~--~~~-------------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T 1nd4_A 90 DWLLLGEVPGQDLL--SSH-------------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAG 151 (264)
T ss_dssp EEEEEECCSSEETT--TSC-------------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTT
T ss_pred CEEEEEecCCcccC--cCc-------------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcC
Confidence 89999999998884 210 11 1256777888888888641
Q ss_pred -------------------------------CCCeEeecCCCCCeEecCCCcEEEccccccee
Q 046598 821 -------------------------------QPPIAHCDLKPSNILLDEDMIAHIGDFGLARF 852 (986)
Q Consensus 821 -------------------------------~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~ 852 (986)
.+.++|||++|.||++++++.+.|+|||.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 152 LVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11399999999999998776677999998853
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.93 E-value=3.5e-08 Score=110.68 Aligned_cols=145 Identities=14% Similarity=0.087 Sum_probs=71.4
Q ss_pred CccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccc-cccEEEecccccCCCCCcccCCCC
Q 046598 374 PAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNL-KLFILYLSYNFLQGSIPSSLGRYE 452 (986)
Q Consensus 374 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~L~~L~L~~N~l~~~~p~~~~~l~ 452 (986)
...+....+|+.+.+..+ +..+...+|.+..+|+.+.+..+ ++......|... +|+.+.+..+ +.......|.+++
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccc
Confidence 344555555555555444 22244455555555665555443 332222333222 2333433322 2223344556666
Q ss_pred CCCeeecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCC
Q 046598 453 TLTTIDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSC 524 (986)
Q Consensus 453 ~L~~L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 524 (986)
+|+.+.+.++.++ .|++..|..+.+|+.+.|..+ ++.+...+|.++.+|+.+.+..+ ++.+-..+|.++
T Consensus 287 ~L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 287 NLTKVVMDNSAIE-TLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp TCCEEEECCTTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred ccccccccccccc-eehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 6666666666665 555555666666666666543 44344455666666666655443 332333444443
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.93 E-value=2.8e-08 Score=111.47 Aligned_cols=165 Identities=12% Similarity=0.112 Sum_probs=85.4
Q ss_pred ccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCccceeecCcccccccccEEEecccccCCCCCcccCCCCCCCe
Q 046598 377 IGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRNRFQGNIPPSIGNLKLFILYLSYNFLQGSIPSSLGRYETLTT 456 (986)
Q Consensus 377 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 456 (986)
+.....+..+.+..+.-. .....+....+|+.+.+..+ +.. .....|.++..|+.
T Consensus 190 ~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~-----------------------i~~~~f~~~~~L~~ 244 (379)
T 4h09_A 190 YPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTT-----------------------LGDGAFYGMKALDE 244 (379)
T ss_dssp CCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCE-----------------------ECTTTTTTCSSCCE
T ss_pred ccccccccccccccceeE-Eeecccccccccceeeeccc-eeE-----------------------EccccccCCccceE
Confidence 444555666655544333 45566677777777766544 221 22334445555555
Q ss_pred eecCCCccCCCCCcccccCCCcceEEEccCCcccccCCcccccccccchhhccCccccccCcccccCCccccEEeccccc
Q 046598 457 IDLSNNNLTGTIPPQFIGLSSSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNKLKGEIPSTLGSCIKLEQLEMQENF 536 (986)
Q Consensus 457 L~L~~N~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 536 (986)
+.+..+ ++ .|....|..+.+|+.+.+..+ ++......|.++++|+.+.+.++.++......|.++.+|+.+.|..+
T Consensus 245 i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~- 320 (379)
T 4h09_A 245 IAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA- 320 (379)
T ss_dssp EEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-
T ss_pred EEcCCC-cc-EeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-
Confidence 555443 33 444444555555555555433 33233445555556666666555555444455556666666666543
Q ss_pred ccccCCccccCCCCCCEEeCCCccCcccCchhhhc
Q 046598 537 LQGPIPSSLSSLRGLSVLDLSQNNLSGKIPELLIR 571 (986)
Q Consensus 537 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 571 (986)
++.....+|.++.+|+.+.+..+ ++..-...|.+
T Consensus 321 l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~ 354 (379)
T 4h09_A 321 LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEG 354 (379)
T ss_dssp CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTT
T ss_pred ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhC
Confidence 44344455666666666666443 44333344443
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.89 E-value=2.9e-10 Score=125.35 Aligned_cols=156 Identities=12% Similarity=0.170 Sum_probs=77.0
Q ss_pred CeEEEEeccCCCCcc-c-------cCcCccCCCCCCEEEccCCCcc---------ccCCcchhccccCceeeceecccCC
Q 046598 62 QRVTILDLESLKLAG-S-------ISPHVGNLSFLKVLRLYNNSFN---------HEIPSEFDRLRRLQVLALHYNSIGG 124 (986)
Q Consensus 62 ~~v~~l~l~~~~l~~-~-------~~~~~~~l~~L~~L~L~~n~l~---------~~~p~~~~~l~~L~~L~L~~N~l~~ 124 (986)
.+|+.|.+...+..| . +..++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 356666666555442 1 2344556777778877654331 123344566667777777666211
Q ss_pred CCccchhcCccccceecccccccCccCcccc--CCCCCCeEEccC--CcCCCC-----ccccc--CCCcCcceeeccCCc
Q 046598 125 AIPANISSCSNLIQLRLFHNQLVGKIPSELS--SLSKIEHISVND--NNLTGS-----IPSSL--GNLSSIRSLFLSGNN 193 (986)
Q Consensus 125 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~-----~p~~~--~~l~~L~~L~L~~N~ 193 (986)
.++. + .+++|++|+|..|.+.......++ .+++|++|+|+. |...+. +...+ ..+++|++|+|++|.
T Consensus 186 ~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 186 SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 1222 2 256666666666665533333333 566666666642 111111 00111 134556666666655
Q ss_pred ccCcCcchhh---ccCCCceeecccccccc
Q 046598 194 LEGSIPDTLG---WLKNLVNLTMAQNRLSG 220 (986)
Q Consensus 194 l~~~~p~~~~---~l~~L~~L~L~~N~l~~ 220 (986)
+....+..+. .+++|++|+|+.|.+++
T Consensus 264 i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp THHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred CchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 5432222222 34555555555555543
No 412
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.88 E-value=6e-10 Score=120.90 Aligned_cols=190 Identities=17% Similarity=0.130 Sum_probs=122.9
Q ss_pred CcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcC-CCCc--ceeeeeeccccccCCCceEEEEE
Q 046598 693 VNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNI-RHRN--LVKILTACSGVDYQGNDFKALVF 769 (986)
Q Consensus 693 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~n--iv~l~~~~~~~~~~~~~~~~lv~ 769 (986)
++.++.|.+..||++. ..+++|+.... .....+.+|+++++.+ .+.. +.+++..+.. .......|+||
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~--~~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMP--SETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCC--CSSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCC--CCCCCcceEEE
Confidence 4568999999999873 45889986432 3456788999999887 3322 3444444211 11112458999
Q ss_pred EeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhc------------------------------
Q 046598 770 EFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHD------------------------------ 819 (986)
Q Consensus 770 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~------------------------------ 819 (986)
|+++|.++.+... ..++..++..++.++++.++.||+.
T Consensus 96 ~~i~G~~l~~~~~------------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (304)
T 3sg8_A 96 TKIKGVPLTPLLL------------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSR 163 (304)
T ss_dssp ECCCCEECCHHHH------------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTT
T ss_pred cccCCeECCcccc------------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcc
Confidence 9999988875331 2467777888888888888888861
Q ss_pred -------------------------CCCCeEeecCCCCCeEecC--CCcEEEcccccceecCCCCCcccccc--------
Q 046598 820 -------------------------CQPPIAHCDLKPSNILLDE--DMIAHIGDFGLARFLPLSSAQTSSIG-------- 864 (986)
Q Consensus 820 -------------------------~~~~ivH~Dlkp~NIll~~--~~~~kL~DFG~a~~~~~~~~~~~~~~-------- 864 (986)
..+.++|+|++|.||++++ +..+.++||+.+..-....+......
T Consensus 164 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~ 243 (304)
T 3sg8_A 164 ELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGME 243 (304)
T ss_dssp TSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHH
T ss_pred cCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHH
Confidence 1246899999999999998 45688999999875432111110000
Q ss_pred ----ccccccccc-cccccCCCcCcccchhhHHHHHHHHHhCCCCC
Q 046598 865 ----AKGSIGYIA-PEYGLGSEVSISGDVYSYGILLLELITRKKPT 905 (986)
Q Consensus 865 ----~~gt~~y~a-PE~~~~~~~~~~sDvwSlGvvl~elltg~~pf 905 (986)
.....++.. |+... ......+.|++|.++|.+.+|+.+|
T Consensus 244 ~~~~~l~~Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 244 FVSKILNHYKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHHHHHHTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 000011111 22211 1123368999999999999998875
No 413
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.87 E-value=4.5e-09 Score=116.98 Aligned_cols=145 Identities=16% Similarity=0.183 Sum_probs=106.0
Q ss_pred CCcccccccceeEEEEEECCCCeEEEEEEee--ccCc-hhHHHHHHHHHHHhcCC--CCcceeeeeeccccccCCCceEE
Q 046598 692 SVNQIGEGSFGSVFKGILDDGRTTIAVKVFN--LLHH-GAFKSFIAECNTLKNIR--HRNLVKILTACSGVDYQGNDFKA 766 (986)
Q Consensus 692 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~--~~~~-~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~~~~~~ 766 (986)
.++.++.|.++.||++...+ ..+++|+.. .... .....+.+|+++++.+. +..+.++++++... ...+..+
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~--~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~--~~~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG--QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDE--SVIGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS--CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCT--TTTSSCE
T ss_pred eEEEcCCcccceEEEEEECC--ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCC--CccCCeE
Confidence 45778999999999998764 578888875 3221 22356788999999886 45678888875432 1124579
Q ss_pred EEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcC--------------------------
Q 046598 767 LVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDC-------------------------- 820 (986)
Q Consensus 767 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-------------------------- 820 (986)
+||||++|..+.+.. ...++..++..++.++++.|+.||+..
T Consensus 118 ~vme~v~G~~l~~~~------------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS------------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQ 185 (359)
T ss_dssp EEEECCCCBCCCCTT------------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHH
T ss_pred EEEEecCCeecCCCc------------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHH
Confidence 999999997775422 123678888999999999999999831
Q ss_pred -----------------------------CCCeEeecCCCCCeEecCCCc--EEEccccccee
Q 046598 821 -----------------------------QPPIAHCDLKPSNILLDEDMI--AHIGDFGLARF 852 (986)
Q Consensus 821 -----------------------------~~~ivH~Dlkp~NIll~~~~~--~kL~DFG~a~~ 852 (986)
.+.++|||++|.||+++.++. +.|+||+.+..
T Consensus 186 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 186 YKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999999975
No 414
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.82 E-value=1.4e-09 Score=119.83 Aligned_cols=182 Identities=12% Similarity=0.153 Sum_probs=93.9
Q ss_pred CCCCEEEccCCCccc-c-------CCcchhccccCceeeceecccC---------CCCccchhcCccccceecccccccC
Q 046598 86 SFLKVLRLYNNSFNH-E-------IPSEFDRLRRLQVLALHYNSIG---------GAIPANISSCSNLIQLRLFHNQLVG 148 (986)
Q Consensus 86 ~~L~~L~L~~n~l~~-~-------~p~~~~~l~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~Ls~N~l~~ 148 (986)
+.++.|.+......+ . +..+...+++|+.|.+..+... +.++..+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 456777777665542 2 2344667888999988765432 123444556667777777666311
Q ss_pred ccCccccCCCCCCeEEccCCcCCCCcccccC--CCcCcceeeccC--CcccCc-----Ccchh--hccCCCceeeccccc
Q 046598 149 KIPSELSSLSKIEHISVNDNNLTGSIPSSLG--NLSSIRSLFLSG--NNLEGS-----IPDTL--GWLKNLVNLTMAQNR 217 (986)
Q Consensus 149 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~-----~p~~~--~~l~~L~~L~L~~N~ 217 (986)
.++. +. +++|++|+|..|.++......+. .+++|++|+|+. |...+. +...+ ..+++|++|+|++|.
T Consensus 186 ~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 186 SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 1222 32 56667777666665533333332 566666666642 111110 00111 124555555555555
Q ss_pred ccccCCccccCCCCccEEeccccccccccCCcccccccccceEEecCceeccc----CCccccCCCCCcEEeccccccc
Q 046598 218 LSGTIPSSIFNISSITGFDAGVNKIQGAIPLDYGFSLQNLQFFSVGENQLTGA----IPPTISNASNLEIFHGSVNKLT 292 (986)
Q Consensus 218 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~ls~N~l~ 292 (986)
+++..+..++. ...+++|++|+|+.|.+++. ++..+..+++|+.|++++|.++
T Consensus 264 i~~~~~~~la~----------------------a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 264 EQNVVVEMFLE----------------------SDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp THHHHHHHHHH----------------------CSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CchHHHHHHHh----------------------CccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 54322222221 01245666666666666542 2333445566777777766654
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.58 E-value=3.2e-09 Score=110.65 Aligned_cols=63 Identities=25% Similarity=0.331 Sum_probs=25.7
Q ss_pred ccccchhhccCccccc--cCcccccCCccccEEecccccccccCCccccCCC--CCCEEeCCCccCccc
Q 046598 500 LKNLEILNVFGNKLKG--EIPSTLGSCIKLEQLEMQENFLQGPIPSSLSSLR--GLSVLDLSQNNLSGK 564 (986)
Q Consensus 500 l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~ 564 (986)
+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|++++.
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~ 235 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDT 235 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGG
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccc
Confidence 3344444444444443 2223333444444444444444432 1222222 444445555544443
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.52 E-value=6.2e-09 Score=103.51 Aligned_cols=121 Identities=12% Similarity=0.081 Sum_probs=60.1
Q ss_pred CcCccCCCCCCEEEccCC-Ccccc----CCcchhccccCceeeceecccCCC----CccchhcCccccceecccccccCc
Q 046598 79 SPHVGNLSFLKVLRLYNN-SFNHE----IPSEFDRLRRLQVLALHYNSIGGA----IPANISSCSNLIQLRLFHNQLVGK 149 (986)
Q Consensus 79 ~~~~~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ 149 (986)
...+...+.|++|+|++| .+... +...+...++|++|+|++|+|+.. +...+...++|++|+|++|.|...
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 344555666777777766 66532 233444455666666666666521 222333334455555555554422
Q ss_pred cCccccCCCCCCeEEccCCcCCCCcccccCCCcCcceeec--cCCcccCc----CcchhhccCCCceeeccccccc
Q 046598 150 IPSELSSLSKIEHISVNDNNLTGSIPSSLGNLSSIRSLFL--SGNNLEGS----IPDTLGWLKNLVNLTMAQNRLS 219 (986)
Q Consensus 150 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L--~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 219 (986)
--. .+...+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 109 g~~--------------------~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 109 GIL--------------------ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHH--------------------HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHH--------------------HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 100 12334444455566666 55555532 2233344466666666666654
No 417
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.51 E-value=3.6e-07 Score=99.60 Aligned_cols=137 Identities=15% Similarity=0.159 Sum_probs=100.8
Q ss_pred CCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCC----CcceeeeeeccccccCCCce
Q 046598 689 RFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRH----RNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 689 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~~~~ 764 (986)
.+..++.++.|..+.||++ +..+++|+.... .....+.+|.++++.+.+ ..+.+++++ +.
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---------~~ 101 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ---------SD 101 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---------CS
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec---------CC
Confidence 5666788999999999998 456888876432 224568899998888865 223444443 34
Q ss_pred EEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcC------------------------
Q 046598 765 KALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDC------------------------ 820 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------------------------ 820 (986)
.++||||++|.++..... ..++..++..++.++++.++.||+..
T Consensus 102 ~~lvme~i~G~~l~~~~~------------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (320)
T 3r70_A 102 RFNIMKYIKGERITYEQY------------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKK 169 (320)
T ss_dssp SCEEEECCCCBCCCHHHH------------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHH
T ss_pred cEEEEeecCCcccccccc------------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHH
Confidence 689999999988864331 23566677788888888888888542
Q ss_pred ------------------------------------CCCeEeecCCCCCeEecCCCcEEEcccccceec
Q 046598 821 ------------------------------------QPPIAHCDLKPSNILLDEDMIAHIGDFGLARFL 853 (986)
Q Consensus 821 ------------------------------------~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 853 (986)
.+.++|+|++|.||+++.+..+.|+||+.+...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 170 LLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 124599999999999998766799999999754
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.47 E-value=2.2e-08 Score=99.55 Aligned_cols=87 Identities=16% Similarity=0.271 Sum_probs=49.0
Q ss_pred ccccchhhccCcccccc----CcccccCCccccEEeccccccccc----CCccccCCCCCCEEeC--CCccCccc----C
Q 046598 500 LKNLEILNVFGNKLKGE----IPSTLGSCIKLEQLEMQENFLQGP----IPSSLSSLRGLSVLDL--SQNNLSGK----I 565 (986)
Q Consensus 500 l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L--s~N~l~~~----~ 565 (986)
.++|++|+|++|+|... +...+...+.|++|+|++|.|.+. +...+...++|++|+| ++|.|+.. +
T Consensus 64 ~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l 143 (185)
T 1io0_A 64 NTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEI 143 (185)
T ss_dssp CCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHH
T ss_pred CCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHH
Confidence 34444455555544421 223344445566666666666542 2345555667777777 66777643 3
Q ss_pred chhhhcccccceeeccCCccc
Q 046598 566 PELLIRLQLVKNLNLSNNDLE 586 (986)
Q Consensus 566 p~~~~~l~~L~~l~ls~N~l~ 586 (986)
.+.+...++|++|+|++|.+.
T Consensus 144 ~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 144 ANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCcCEEeccCCCCC
Confidence 344445577777777777765
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.35 E-value=1.2e-06 Score=93.50 Aligned_cols=76 Identities=20% Similarity=0.164 Sum_probs=59.4
Q ss_pred CCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCC---cceeeeeeccccccCCCceEEEE
Q 046598 692 SVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHR---NLVKILTACSGVDYQGNDFKALV 768 (986)
Q Consensus 692 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~~~~~~lv 768 (986)
..+.++.|.++.||++...+ ++.++||+...........+..|++.++.+.+. .+.+++++ +..++|
T Consensus 19 ~~~~l~gG~~n~vy~v~~~d-G~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~---------~~~~lv 88 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELAD-GTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW---------DDRTLA 88 (288)
T ss_dssp EEEEEEEETTEEEEEEEETT-SCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE---------ETTEEE
T ss_pred ceeeeCCcchhheEEEEeCC-CCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEe---------cCcEEE
Confidence 35789999999999998765 678999997543333346789999999999764 57777776 236899
Q ss_pred EEeccCCCH
Q 046598 769 FEFMHNRSL 777 (986)
Q Consensus 769 ~e~~~~gsL 777 (986)
|||++++++
T Consensus 89 me~l~g~~~ 97 (288)
T 3d1u_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEecccCCC
Confidence 999999875
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.34 E-value=1.5e-06 Score=92.31 Aligned_cols=137 Identities=17% Similarity=0.091 Sum_probs=96.4
Q ss_pred cccccccce-eEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCC-CCcceeeeeeccccccCCCceEEEEEEe
Q 046598 694 NQIGEGSFG-SVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGNDFKALVFEF 771 (986)
Q Consensus 694 ~~lg~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~lv~e~ 771 (986)
+.+..|..+ .||+.....++..+++|+.+.. ....+.+|...++.+. +--|.++++++ .+.+..++|||+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~-----~~~~~~~lvme~ 101 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFI-----RTPDDAWLLTTA 101 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEE-----EETTEEEEEEEC
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEE-----EECCeEEEEEEe
Confidence 345556665 6999888777788999987542 3456788999888773 33366677764 334678999999
Q ss_pred ccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcC-------------------------------
Q 046598 772 MHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDC------------------------------- 820 (986)
Q Consensus 772 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------------------------------- 820 (986)
++|.++.+.... ...+...++.+++..|..||+.-
T Consensus 102 l~G~~~~~~~~~--------------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (272)
T 4gkh_A 102 IPGKTAFQVLEE--------------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDF 167 (272)
T ss_dssp CCSEEHHHHHHH--------------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGC
T ss_pred eCCccccccccC--------------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhc
Confidence 999888776531 11123345666666666666421
Q ss_pred ------------------------CCCeEeecCCCCCeEecCCCcEEEccccccee
Q 046598 821 ------------------------QPPIAHCDLKPSNILLDEDMIAHIGDFGLARF 852 (986)
Q Consensus 821 ------------------------~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~ 852 (986)
.+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 168 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 168 DDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12389999999999999877778999998864
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.28 E-value=3.1e-06 Score=91.35 Aligned_cols=138 Identities=17% Similarity=0.132 Sum_probs=94.5
Q ss_pred CcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCC---cceeeeeeccccccCCCceEEEEE
Q 046598 693 VNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHR---NLVKILTACSGVDYQGNDFKALVF 769 (986)
Q Consensus 693 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~~~~~~lv~ 769 (986)
++.++.|....||+. +..+++|+.. .......+.+|+++++.+.+. .|.+++.++. ...+..++||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~----~~~g~~~~v~ 92 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGK----RSDGNPFVGY 92 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEE----CTTSCEEEEE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecc----cCCCceEEEE
Confidence 456888888999998 3567888843 223456789999999998642 3555555532 2345678999
Q ss_pred EeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhc------------------------------
Q 046598 770 EFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHD------------------------------ 819 (986)
Q Consensus 770 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~------------------------------ 819 (986)
||++|.++.+... ..++..+...++.++++.|+.||+.
T Consensus 93 e~i~G~~l~~~~~------------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~ 160 (306)
T 3tdw_A 93 RKVQGQILGEDGM------------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQV 160 (306)
T ss_dssp ECCCSEECHHHHH------------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHT
T ss_pred eccCCeECchhhh------------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhc
Confidence 9999988876321 1234445555555555555555542
Q ss_pred ---------------------------CCCCeEeecCCCCCeEecC---CCc-EEEcccccceec
Q 046598 820 ---------------------------CQPPIAHCDLKPSNILLDE---DMI-AHIGDFGLARFL 853 (986)
Q Consensus 820 ---------------------------~~~~ivH~Dlkp~NIll~~---~~~-~kL~DFG~a~~~ 853 (986)
..+.++|+|++|.||+++. ++. +.|+||+.+..-
T Consensus 161 ~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 161 FPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred ccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2335799999999999987 455 589999988753
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.01 E-value=1.6e-05 Score=87.86 Aligned_cols=152 Identities=12% Similarity=0.130 Sum_probs=89.2
Q ss_pred CCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCC--cceeeeeeccccccCCCceEEEE
Q 046598 691 SSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHR--NLVKILTACSGVDYQGNDFKALV 768 (986)
Q Consensus 691 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~~~~~~~~~~lv 768 (986)
..++.++.|....+|+.... +..+++|+.... ..+.+|+.+++.+... .+.++++++. ...+..++|
T Consensus 44 ~~i~~l~gG~~n~~y~v~~~--g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~----~~~g~~~lv 112 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDVG--GRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGE----FSESLTYCI 112 (362)
T ss_dssp EEEEEEEECSSEEEEEEEET--TEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEE----SSSSCEEEE
T ss_pred ceEEECCCCCcceEEEEEEC--CcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEecc----CCCCCeEEE
Confidence 34567889999999998863 678999987432 3578888888887543 2455555532 122568999
Q ss_pred EEeccCCCHhHh------------------hccCCCCC-cc------ccCCCccCHHHH---------------------
Q 046598 769 FEFMHNRSLEEW------------------LHPITRED-ET------DEAPRSLNLIQR--------------------- 802 (986)
Q Consensus 769 ~e~~~~gsL~~~------------------l~~~~~~~-~~------~~~~~~l~~~~~--------------------- 802 (986)
|||++|.++.+. ++...... .. ......-+|.+.
T Consensus 113 ~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~ 192 (362)
T 3ovc_A 113 SRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVS 192 (362)
T ss_dssp EECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTH
T ss_pred EEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999998766421 11110000 00 000000011111
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCeEeecCCCCCeEecCCCcEEEcccccceec
Q 046598 803 LNISIDVACALNYLHHD-CQPPIAHCDLKPSNILLDEDMIAHIGDFGLARFL 853 (986)
Q Consensus 803 ~~i~~qi~~~L~~LH~~-~~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 853 (986)
......+....+++... ..+.++|+|+.|.||++++++.+.|+||+.+..-
T Consensus 193 ~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 193 ASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred ccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 01111222222333221 1257899999999999988778889999999753
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.94 E-value=1.2e-05 Score=89.15 Aligned_cols=85 Identities=4% Similarity=-0.054 Sum_probs=54.8
Q ss_pred Cccc-ccccceeEEEEEEC---C---CCeEEEEEEeeccC---chhHHHHHHHHHHHhcCC-C--Ccceeeeeecccccc
Q 046598 693 VNQI-GEGSFGSVFKGILD---D---GRTTIAVKVFNLLH---HGAFKSFIAECNTLKNIR-H--RNLVKILTACSGVDY 759 (986)
Q Consensus 693 ~~~l-g~G~~g~Vy~~~~~---~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~ 759 (986)
.+.| +.|....+|+.... + ++..+++|+..... ......+.+|+++++.+. + -.+.++++++...
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~-- 102 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTG-- 102 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSS--
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCC--
Confidence 3567 88889999998764 1 14678899865422 101245678888888773 2 3566777764321
Q ss_pred CCCceEEEEEEeccCCCHhH
Q 046598 760 QGNDFKALVFEFMHNRSLEE 779 (986)
Q Consensus 760 ~~~~~~~lv~e~~~~gsL~~ 779 (986)
...+..++||||++|.++.+
T Consensus 103 ~~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 103 DVLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TTTSSCEEEEECCCCBCCCB
T ss_pred CccCCceEEEEecCCCChhh
Confidence 11145689999999877654
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.87 E-value=2.3e-05 Score=88.14 Aligned_cols=76 Identities=13% Similarity=0.148 Sum_probs=49.0
Q ss_pred CcccccccceeEEEEEECCCCeEEEEEEeeccCc-------hhHHHHHHHHHHHhcCCC--C-cceeeeeeccccccCCC
Q 046598 693 VNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHH-------GAFKSFIAECNTLKNIRH--R-NLVKILTACSGVDYQGN 762 (986)
Q Consensus 693 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~l~~~~~~~~~~~~ 762 (986)
.+.+|.|..+.||++....+++.|+||....... ....++..|.++++.+.. | .+.+++.+. .
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d-------~ 107 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------T 107 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE-------T
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc-------C
Confidence 4679999999999998765567899998643211 123456788888887632 3 344555441 2
Q ss_pred ceEEEEEEeccCC
Q 046598 763 DFKALVFEFMHNR 775 (986)
Q Consensus 763 ~~~~lv~e~~~~g 775 (986)
+..++||||+++.
T Consensus 108 ~~~~lvmE~l~g~ 120 (397)
T 2olc_A 108 EMAVTVMEDLSHL 120 (397)
T ss_dssp TTTEEEECCCTTS
T ss_pred CccEEEEEeCCCc
Confidence 3458999999764
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.68 E-value=1.2e-05 Score=77.56 Aligned_cols=34 Identities=15% Similarity=0.081 Sum_probs=16.9
Q ss_pred CcceeeccCCc-ccCcCcchhhccCCCceeecccc
Q 046598 183 SIRSLFLSGNN-LEGSIPDTLGWLKNLVNLTMAQN 216 (986)
Q Consensus 183 ~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N 216 (986)
+|++|+|++|. |+...-..+..+++|++|+|+++
T Consensus 115 ~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c 149 (176)
T 3e4g_A 115 SMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDL 149 (176)
T ss_dssp HCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESC
T ss_pred CCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCC
Confidence 45555555543 44333334445555555555554
No 426
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.67 E-value=0.0001 Score=78.74 Aligned_cols=79 Identities=19% Similarity=0.164 Sum_probs=56.5
Q ss_pred CCCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCC---CcceeeeeeccccccCCCceE
Q 046598 689 RFSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRH---RNLVKILTACSGVDYQGNDFK 765 (986)
Q Consensus 689 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~~~~~~~~~ 765 (986)
+...++.+|.|..+.||+....+ |+.|+||+...........+..|++.|+.+.- --+.+++++ +..
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~D-G~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~---------~~~ 85 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELAD-GTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW---------DDR 85 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETT-SCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE---------ETT
T ss_pred CeEEEEecCCCCCeEEEEEEECC-CCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec---------cCc
Confidence 34456789999999999999876 68899998764443334567889998887732 235555554 234
Q ss_pred EEEEEeccCCCH
Q 046598 766 ALVFEFMHNRSL 777 (986)
Q Consensus 766 ~lv~e~~~~gsL 777 (986)
++||||++++..
T Consensus 86 ~lv~e~l~~~~~ 97 (288)
T 3f7w_A 86 TLAMEWVDERPP 97 (288)
T ss_dssp EEEEECCCCCCC
T ss_pred eEEEEeecccCC
Confidence 799999987643
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.67 E-value=9e-06 Score=78.33 Aligned_cols=84 Identities=13% Similarity=0.089 Sum_probs=57.1
Q ss_pred CcceEEEccCCcccccCCcccccccccchhhccCcc-ccccCcccccCC----ccccEEeccccc-ccccCCccccCCCC
Q 046598 477 SSLIVLDLSRNQLTGSIPSEVGNLKNLEILNVFGNK-LKGEIPSTLGSC----IKLEQLEMQENF-LQGPIPSSLSSLRG 550 (986)
Q Consensus 477 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~ 550 (986)
..|+.||++++.|+..--..+..+++|+.|+|++|. +++.--..++.+ ++|++|+|+++. |++.--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 358888888888876555566777888888888874 664444445554 367777777764 66554455666777
Q ss_pred CCEEeCCCcc
Q 046598 551 LSVLDLSQNN 560 (986)
Q Consensus 551 L~~L~Ls~N~ 560 (986)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777777764
No 428
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.64 E-value=0.00046 Score=75.63 Aligned_cols=153 Identities=17% Similarity=0.140 Sum_probs=81.4
Q ss_pred cccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCC--Ccceeeeeeccccc-cCCCceEEEEEE
Q 046598 694 NQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRH--RNLVKILTACSGVD-YQGNDFKALVFE 770 (986)
Q Consensus 694 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~-~~~~~~~~lv~e 770 (986)
+.++.|..+.||++...+ ..+++|+.... ..+...|+.+++.+.. -.+.+++....+.. ....+..++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~~--~~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDS--GAVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEETT--EEEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeCC--CCEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 456667789999998754 35899998642 1334445555555421 12334433211100 123456899999
Q ss_pred eccCCCHh--------------HhhccCCCCC----ccccCCCccCHHH-------------------------------
Q 046598 771 FMHNRSLE--------------EWLHPITRED----ETDEAPRSLNLIQ------------------------------- 801 (986)
Q Consensus 771 ~~~~gsL~--------------~~l~~~~~~~----~~~~~~~~l~~~~------------------------------- 801 (986)
|++|.++. ..++...... ........-.|..
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 1112111100 0000000111211
Q ss_pred HHHHHHHHHHHHHHHHh----------cCCCCeEeecCCCCCeEecCCCcEEEccccccee
Q 046598 802 RLNISIDVACALNYLHH----------DCQPPIAHCDLKPSNILLDEDMIAHIGDFGLARF 852 (986)
Q Consensus 802 ~~~i~~qi~~~L~~LH~----------~~~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~ 852 (986)
...+..++.+++++|++ ...+.++|||+++.||+++.++.+.|+||+.+..
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 11122234456666663 1245899999999999998888999999998864
No 429
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.55 E-value=5.2e-05 Score=85.80 Aligned_cols=80 Identities=10% Similarity=0.141 Sum_probs=50.9
Q ss_pred CCCeEeecCCCCCeEecCCCcEEEcccccceecCCCCCccccccccccccccccccccC---CCcCcccchhhHHHHHHH
Q 046598 821 QPPIAHCDLKPSNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAPEYGLG---SEVSISGDVYSYGILLLE 897 (986)
Q Consensus 821 ~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlGvvl~e 897 (986)
.+.++|||++|.||+++.++ ++++||+.+..-+..-+-.... ..-...|++|+.... .......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYL-GNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHH-HHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHH-HHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 34899999999999998876 9999999997532111111000 001235677765432 122334566788888898
Q ss_pred HHhCC
Q 046598 898 LITRK 902 (986)
Q Consensus 898 lltg~ 902 (986)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 430
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.34 E-value=0.00095 Score=71.47 Aligned_cols=145 Identities=15% Similarity=0.125 Sum_probs=90.0
Q ss_pred CcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCC---CCcceeeeeeccccccCCCceEEEEE
Q 046598 693 VNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIR---HRNLVKILTACSGVDYQGNDFKALVF 769 (986)
Q Consensus 693 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~~~~~~lv~ 769 (986)
.+.++.|....+|+.... +..+++|+.... ....+..|++.++.+. ...+.++++++. ..+..++||
T Consensus 41 ~~~l~gG~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~-----~~g~~~lvm 110 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE--VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGN-----SQGHSFLLL 110 (312)
T ss_dssp EEEECCSSSSEEEEEESS--SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEE-----CSSEEEEEE
T ss_pred eEEeCCccceeeeEEEEC--CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEee-----cCCceEEEE
Confidence 467899999999999863 567889987643 3467888988888873 356777877742 346789999
Q ss_pred EeccCCCHhH-----------hhccCCC-CCccc-----------cCCCccCHHHHH---HHH----------------H
Q 046598 770 EFMHNRSLEE-----------WLHPITR-EDETD-----------EAPRSLNLIQRL---NIS----------------I 807 (986)
Q Consensus 770 e~~~~gsL~~-----------~l~~~~~-~~~~~-----------~~~~~l~~~~~~---~i~----------------~ 807 (986)
||+++..+.. .++.... ..... .....-+|.+.. ++. .
T Consensus 111 e~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~ 190 (312)
T 3jr1_A 111 EALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNID 190 (312)
T ss_dssp ECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHH
T ss_pred EeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHH
Confidence 9999876521 2232221 00000 001112444321 111 1
Q ss_pred HHHHH-HHHHHh-cCCCCeEeecCCCCCeEecCCCcEEEcccc
Q 046598 808 DVACA-LNYLHH-DCQPPIAHCDLKPSNILLDEDMIAHIGDFG 848 (986)
Q Consensus 808 qi~~~-L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL~DFG 848 (986)
++... ...|.. ...+.++|+|+.+.|++++.++ +.|.||+
T Consensus 191 ~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 191 LIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11111 223321 1256899999999999999887 8899984
No 431
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.33 E-value=0.0009 Score=72.53 Aligned_cols=173 Identities=15% Similarity=0.123 Sum_probs=92.5
Q ss_pred CCcChHHHHHhhcCCCC-----CcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCc--ce
Q 046598 676 PNISYQNLYNATDRFSS-----VNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRN--LV 748 (986)
Q Consensus 676 ~~~~~~~~~~~~~~y~~-----~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv 748 (986)
+.++.+++.....+|.+ .+.|+.|....+|+....+ + .+++|+.... ...+.+..|+.+++.+.... +.
T Consensus 5 ~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~-g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 5 TDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTK-D-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESS-C-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCC
T ss_pred ccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCC-c-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCC
Confidence 44666777777777765 2346678889999998765 3 5889988652 12245566777777663212 33
Q ss_pred eeeeeccccc-cCCCceEEEEEEeccCCCHhH--------------hhccCCCCCcccc--CCCccCHHHHHH-------
Q 046598 749 KILTACSGVD-YQGNDFKALVFEFMHNRSLEE--------------WLHPITREDETDE--APRSLNLIQRLN------- 804 (986)
Q Consensus 749 ~l~~~~~~~~-~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~~~~~~~--~~~~l~~~~~~~------- 804 (986)
+++....+.. ....+..++||+|++|..+.. .++.....-.... ......|.....
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 3332211000 011356789999998865421 1111110000000 000011221100
Q ss_pred -----HHHHHHHHHHHHHhc----CCCCeEeecCCCCCeEecCCCcEEEccccccee
Q 046598 805 -----ISIDVACALNYLHHD----CQPPIAHCDLKPSNILLDEDMIAHIGDFGLARF 852 (986)
Q Consensus 805 -----i~~qi~~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~ 852 (986)
+...+.+.++++++. ..++++|+|+.+.||+++++..+.++||+.+..
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011234455555532 234799999999999999876668999998864
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.28 E-value=6e-05 Score=74.00 Aligned_cols=86 Identities=12% Similarity=0.164 Sum_probs=45.1
Q ss_pred ccccchhhccCccccc----cCcccccCCccccEEecccccccccC----CccccCCCCCCEEeCCCc---cCcc----c
Q 046598 500 LKNLEILNVFGNKLKG----EIPSTLGSCIKLEQLEMQENFLQGPI----PSSLSSLRGLSVLDLSQN---NLSG----K 564 (986)
Q Consensus 500 l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~Ls~N---~l~~----~ 564 (986)
-+.|+.|+|++|+|.. .+.+.+..-+.|++|+|++|.|.+.. -..+..-+.|++|+|++| .+.. .
T Consensus 69 N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ 148 (197)
T 1pgv_A 69 SKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMD 148 (197)
T ss_dssp CSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHH
T ss_pred CCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHH
Confidence 3445555555555542 12333444555666666666665422 233444556777777654 3332 2
Q ss_pred CchhhhcccccceeeccCCcc
Q 046598 565 IPELLIRLQLVKNLNLSNNDL 585 (986)
Q Consensus 565 ~p~~~~~l~~L~~l~ls~N~l 585 (986)
+.+.+..-+.|+.|+++.|.+
T Consensus 149 ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 149 MMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHhCCCcCeEeccCCCc
Confidence 334455566777777766643
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.23 E-value=4e-05 Score=75.29 Aligned_cols=66 Identities=15% Similarity=0.140 Sum_probs=36.5
Q ss_pred ccCCCCCCEEEccCC-Cccc----cCCcchhccccCceeeceecccCCC----CccchhcCccccceeccccccc
Q 046598 82 VGNLSFLKVLRLYNN-SFNH----EIPSEFDRLRRLQVLALHYNSIGGA----IPANISSCSNLIQLRLFHNQLV 147 (986)
Q Consensus 82 ~~~l~~L~~L~L~~n-~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 147 (986)
+.+-+.|++|+|++| +|.. .+-+++..-+.|+.|+|++|+|+.. +.+.+..-+.|++|+|++|.|.
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 334466777777764 6542 1334455556667777777766522 2333344455666666666554
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.07 E-value=0.0014 Score=70.21 Aligned_cols=73 Identities=8% Similarity=0.115 Sum_probs=44.1
Q ss_pred CCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcc-eeeeeeccccccCCCceEEEEE
Q 046598 691 SSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNL-VKILTACSGVDYQGNDFKALVF 769 (986)
Q Consensus 691 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~~~~~~lv~ 769 (986)
.-++.|+.|....+|++ ..+++|+....... .....+|+.+++.+....+ .++++++ .+.-++|+
T Consensus 21 ~~i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~-------~~~~~~v~ 86 (301)
T 3dxq_A 21 TGPLERLGGLTNLVFRA------GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD-------PATGVMVT 86 (301)
T ss_dssp CSCEEEESCSSEEEEEE------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC-------TTTCCEEE
T ss_pred cceeEcCCcccccccee------eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE-------CCCCEEEE
Confidence 33688999999999999 34888987542211 1223567777766632222 4555442 22346899
Q ss_pred Eec-cCCCH
Q 046598 770 EFM-HNRSL 777 (986)
Q Consensus 770 e~~-~~gsL 777 (986)
||+ +|.++
T Consensus 87 e~i~~g~~l 95 (301)
T 3dxq_A 87 RYIAGAQTM 95 (301)
T ss_dssp ECCTTCEEC
T ss_pred eecCCCccC
Confidence 999 66554
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.05 E-value=0.002 Score=69.92 Aligned_cols=171 Identities=17% Similarity=0.172 Sum_probs=92.0
Q ss_pred CCCcChHHHHHhhcCCCC-----CcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCC--cc
Q 046598 675 FPNISYQNLYNATDRFSS-----VNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHR--NL 747 (986)
Q Consensus 675 ~~~~~~~~~~~~~~~y~~-----~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--ni 747 (986)
+...+.+++....+.|.+ ++.++ |....||++...+ ++.+++|+..... .....+..|..+++.+... .+
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~-g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~v 84 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDED-RRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPV 84 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTT-CCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSB
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCC-CCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCee
Confidence 445566666666555543 23466 8888999887654 5578999986432 1235667788887776321 23
Q ss_pred eeeeeeccccc-cCCCceEEEEEEeccCCCHhH-----------h---hccCCCCCccccCCCccCHHH-----------
Q 046598 748 VKILTACSGVD-YQGNDFKALVFEFMHNRSLEE-----------W---LHPITREDETDEAPRSLNLIQ----------- 801 (986)
Q Consensus 748 v~l~~~~~~~~-~~~~~~~~lv~e~~~~gsL~~-----------~---l~~~~~~~~~~~~~~~l~~~~----------- 801 (986)
.+++.. .+.. ...++..++||||++|..+.. . ++...... .......+++..
T Consensus 85 p~~~~~-~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~ 162 (328)
T 1zyl_A 85 AAPVAF-NGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQ-LFIHRPTIGLNEYLIEPRKLFED 162 (328)
T ss_dssp CCCCCB-TTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSS-CCSSSCBCSHHHHTHHHHHHHHT
T ss_pred cceeec-CCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccC-CCccCCCCCHHHHHhhHHHHHhh
Confidence 444432 1100 112456789999998855321 0 11110000 000001111111
Q ss_pred -----------HHHHHHHHHHHHHHHHh-cCCCCeEeecCCCCCeEecCCCcEEEccccccee
Q 046598 802 -----------RLNISIDVACALNYLHH-DCQPPIAHCDLKPSNILLDEDMIAHIGDFGLARF 852 (986)
Q Consensus 802 -----------~~~i~~qi~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~ 852 (986)
....+.+++..++..-. ...+.++|||+++.||+++ + .+.++||+.+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 163 ATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11122222222222211 1234789999999999999 4 899999998864
No 436
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.80 E-value=0.0015 Score=71.93 Aligned_cols=148 Identities=12% Similarity=0.162 Sum_probs=83.8
Q ss_pred CcccccccceeEEEEEECC-------CCeEEEEEEeeccCchhHHHHHHHHHHHhcCC-CCcceeeeeeccccccCCCce
Q 046598 693 VNQIGEGSFGSVFKGILDD-------GRTTIAVKVFNLLHHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 693 ~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~ 764 (986)
++.+..|-...+|++.... .++.+++|+..... .......+|.++++.+. +.-..++++++ .+
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~-----~~--- 125 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVF-----PE--- 125 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEE-----TT---
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEc-----CC---
Confidence 3567778889999998742 34789999863321 23455678999888773 32235566653 21
Q ss_pred EEEEEEeccCCCHhHh--------------hccCCCCCccccCCCcc--CHHHHHHHHHHHHH-----------------
Q 046598 765 KALVFEFMHNRSLEEW--------------LHPITREDETDEAPRSL--NLIQRLNISIDVAC----------------- 811 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~--------------l~~~~~~~~~~~~~~~l--~~~~~~~i~~qi~~----------------- 811 (986)
.+||||++|.++..- +.+....+. ...+.. -+.++.++..++..
T Consensus 126 -g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~--~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l 202 (379)
T 3feg_A 126 -GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEM--PFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSL 202 (379)
T ss_dssp -EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCC--SSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTH
T ss_pred -ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCC--CCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHH
Confidence 299999998665321 000000000 011112 24455555544422
Q ss_pred --HHHHHHh----c-CCCCeEeecCCCCCeEecCC----CcEEEccccccee
Q 046598 812 --ALNYLHH----D-CQPPIAHCDLKPSNILLDED----MIAHIGDFGLARF 852 (986)
Q Consensus 812 --~L~~LH~----~-~~~~ivH~Dlkp~NIll~~~----~~~kL~DFG~a~~ 852 (986)
.+..|.+ . ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 203 ~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 203 KDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2333322 1 23479999999999999876 7899999998864
No 437
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.78 E-value=0.0017 Score=59.51 Aligned_cols=38 Identities=29% Similarity=0.316 Sum_probs=22.5
Q ss_pred CCCEEeCCCccCcccCchhhhcccccceeeccCCcccc
Q 046598 550 GLSVLDLSQNNLSGKIPELLIRLQLVKNLNLSNNDLEG 587 (986)
Q Consensus 550 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 587 (986)
+|+.|+|++|+|+...+..|..+++|++|+|++|++.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 45666666666665555555566666666666665554
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.74 E-value=0.0022 Score=72.23 Aligned_cols=74 Identities=18% Similarity=0.255 Sum_probs=49.1
Q ss_pred CcccccccceeEEEEEECC-------CCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCc-ceeeeeeccccccCCCce
Q 046598 693 VNQIGEGSFGSVFKGILDD-------GRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRN-LVKILTACSGVDYQGNDF 764 (986)
Q Consensus 693 ~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~~~~ 764 (986)
++.|+.|....||++...+ .+..+++|+.... .....+.+|..+++.+...+ ..++++.+ .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~-----~~--- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIF-----SG--- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEE-----TT---
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEe-----CC---
Confidence 4568888889999998753 2468999998431 11245567888888774322 35566652 21
Q ss_pred EEEEEEeccCCCH
Q 046598 765 KALVFEFMHNRSL 777 (986)
Q Consensus 765 ~~lv~e~~~~gsL 777 (986)
.+||||++|.++
T Consensus 148 -g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 -GRLEEYIPSRPL 159 (429)
T ss_dssp -EEEECCCCEEEC
T ss_pred -CEEEEEeCCccc
Confidence 389999987544
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.72 E-value=0.004 Score=70.43 Aligned_cols=75 Identities=15% Similarity=0.110 Sum_probs=47.6
Q ss_pred CcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcc-eeeeeeccccccCCCceEEEEEEe
Q 046598 693 VNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNL-VKILTACSGVDYQGNDFKALVFEF 771 (986)
Q Consensus 693 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~~~~~~lv~e~ 771 (986)
++.|+.|-...+|++...+.+..+++|+....... .-...+|..+++.+...++ .++++++ . + .+||||
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~-----~--~--G~v~e~ 182 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFF-----T--N--GRIEEF 182 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEE-----T--T--EEEEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEe-----C--C--eEEEEe
Confidence 45788888999999988654578999987532211 1122578888888754333 4566653 1 1 359999
Q ss_pred ccCCCH
Q 046598 772 MHNRSL 777 (986)
Q Consensus 772 ~~~gsL 777 (986)
++|.++
T Consensus 183 I~G~~l 188 (458)
T 2qg7_A 183 MDGYAL 188 (458)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 988555
No 440
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.69 E-value=0.0065 Score=66.03 Aligned_cols=33 Identities=21% Similarity=0.215 Sum_probs=28.6
Q ss_pred CCCeEeecCCCCCeEecCC----CcEEEcccccceec
Q 046598 821 QPPIAHCDLKPSNILLDED----MIAHIGDFGLARFL 853 (986)
Q Consensus 821 ~~~ivH~Dlkp~NIll~~~----~~~kL~DFG~a~~~ 853 (986)
.+.++|||+.+.||+++.+ +.+.++||+.+..-
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 3489999999999999875 68999999999754
No 441
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.40 E-value=0.0032 Score=57.66 Aligned_cols=35 Identities=29% Similarity=0.418 Sum_probs=15.5
Q ss_pred CCeEEccCCcCCCCcccccCCCcCcceeeccCCcc
Q 046598 160 IEHISVNDNNLTGSIPSSLGNLSSIRSLFLSGNNL 194 (986)
Q Consensus 160 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 194 (986)
|++|+|++|+|+...+..|..+++|++|+|++|.+
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 44444444444433333444444444444444443
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.33 E-value=0.0048 Score=68.20 Aligned_cols=75 Identities=19% Similarity=0.272 Sum_probs=43.9
Q ss_pred CcccccccceeEEEEEECCC--------CeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCc-ceeeeeeccccccCCCc
Q 046598 693 VNQIGEGSFGSVFKGILDDG--------RTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRN-LVKILTACSGVDYQGND 763 (986)
Q Consensus 693 ~~~lg~G~~g~Vy~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~~~ 763 (986)
.+.++.|....+|++...++ +..+++|+...... .......|.++++.+.... +.++++.. .
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~-----~--- 108 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF-----N--- 108 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE-----T---
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec-----C---
Confidence 35677888899999987541 26788998754221 1122356777777774223 44565541 1
Q ss_pred eEEEEEEeccCCCH
Q 046598 764 FKALVFEFMHNRSL 777 (986)
Q Consensus 764 ~~~lv~e~~~~gsL 777 (986)
-++||||++|.++
T Consensus 109 -~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 -GGRIEEWLYGDPL 121 (369)
T ss_dssp -TEEEEECCCSEEC
T ss_pred -CcEEEEEecCCcC
Confidence 2689999988654
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.16 E-value=0.031 Score=60.73 Aligned_cols=32 Identities=19% Similarity=0.287 Sum_probs=28.5
Q ss_pred CCeEeecCCCCCeEecCCCcEEEcccccceec
Q 046598 822 PPIAHCDLKPSNILLDEDMIAHIGDFGLARFL 853 (986)
Q Consensus 822 ~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 853 (986)
..++|+|+.+.||++++++.+.++||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 47999999999999998888999999888653
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.65 E-value=0.027 Score=62.15 Aligned_cols=149 Identities=15% Similarity=0.154 Sum_probs=83.0
Q ss_pred CcccccccceeEEEEEECCC-------CeEEEEEEeeccCch-----------h-------HHHHHHHHHHHhcCC-CCc
Q 046598 693 VNQIGEGSFGSVFKGILDDG-------RTTIAVKVFNLLHHG-----------A-------FKSFIAECNTLKNIR-HRN 746 (986)
Q Consensus 693 ~~~lg~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~~~-----------~-------~~~~~~E~~~l~~l~-h~n 746 (986)
++.|..|-...+|++....+ ...|++++.-..... . .+....|..+++.+. +.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 35676788889999887531 467889987432110 0 112335888887773 444
Q ss_pred ceeeeeeccccccCCCceEEEEEEeccCCCHhHh-h-------------ccCCCCCccccCCCcc--CHHHHHHHHHHHH
Q 046598 747 LVKILTACSGVDYQGNDFKALVFEFMHNRSLEEW-L-------------HPITREDETDEAPRSL--NLIQRLNISIDVA 810 (986)
Q Consensus 747 iv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~-l-------------~~~~~~~~~~~~~~~l--~~~~~~~i~~qi~ 810 (986)
..++++++ .+ .+|+||++|.+|..- + .+...... ...+.. -+..+.++..++.
T Consensus 137 ~Pkl~~~~-----~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~--~~~~~~~~l~~~i~~~~~~l~ 205 (401)
T 3f2s_A 137 GPKLYGIF-----PQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKM--PFNKEPKWLFGTMEKYLKEVL 205 (401)
T ss_dssp SCCEEEEE-----TT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCC--SSCCSCCHHHHHHHHHHHHHH
T ss_pred CCeEEEEe-----CC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCC--CCCCCcchHHHHHHHHHHHHH
Confidence 55666662 21 289999997655321 0 00000000 001111 2233333433321
Q ss_pred ----------------------HHH----HHHHhc-CCCCeEeecCCCCCeEecCC------CcEEEccccccee
Q 046598 811 ----------------------CAL----NYLHHD-CQPPIAHCDLKPSNILLDED------MIAHIGDFGLARF 852 (986)
Q Consensus 811 ----------------------~~L----~~LH~~-~~~~ivH~Dlkp~NIll~~~------~~~kL~DFG~a~~ 852 (986)
+-+ +++... ....++|+|+.+.||+++++ +.+.++||..|..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 206 RIKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HCCCCSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hccCcchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223221 23479999999999999887 7899999998853
No 445
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.36 E-value=0.13 Score=50.60 Aligned_cols=103 Identities=19% Similarity=0.160 Sum_probs=68.3
Q ss_pred CCHhHhhccCCCCCccccCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEcccccceecC
Q 046598 775 RSLEEWLHPITREDETDEAPRSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIGDFGLARFLP 854 (986)
Q Consensus 775 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 854 (986)
.+|.+.++ ..+.++++++++.++.|.+.+|.-.-.... . ..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~---------~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--- 97 (229)
T 2yle_A 33 LSLEEILR---------LYNQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD--- 97 (229)
T ss_dssp EEHHHHHH---------HHTSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C------
T ss_pred ccHHHHHH---------HcCCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc---
Confidence 47889886 456789999999999999999887622101 1 1233457899999999888864 1110
Q ss_pred CCCCccccccccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCC
Q 046598 855 LSSAQTSSIGAKGSIGYIAPEYGLGSEVSISGDVYSYGILLLELITRKKP 904 (986)
Q Consensus 855 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvvl~elltg~~p 904 (986)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 -----------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -----------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp --------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -----------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1233567888753 3456788999999999999985555
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.20 E-value=0.033 Score=62.12 Aligned_cols=149 Identities=16% Similarity=0.205 Sum_probs=84.3
Q ss_pred CcccccccceeEEEEEECCC-------CeEEEEEEeeccCchhHHHHHHHHHHHhcCC-CCcceeeeeeccccccCCCce
Q 046598 693 VNQIGEGSFGSVFKGILDDG-------RTTIAVKVFNLLHHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGNDF 764 (986)
Q Consensus 693 ~~~lg~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~ 764 (986)
++.+..|-...+|+...... +..+++|+..... ...-...+|.++++.+. +.-..++++.+ .
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~-----~---- 144 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF-----P---- 144 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE-----T----
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc-----C----
Confidence 45677788899999987631 4778999864322 11223357888877773 22244555442 1
Q ss_pred EEEEEEeccCCCHhHh-----------------hccCCCCC-cccc--CCCccCHHHHHHHHHHHH--------------
Q 046598 765 KALVFEFMHNRSLEEW-----------------LHPITRED-ETDE--APRSLNLIQRLNISIDVA-------------- 810 (986)
Q Consensus 765 ~~lv~e~~~~gsL~~~-----------------l~~~~~~~-~~~~--~~~~l~~~~~~~i~~qi~-------------- 810 (986)
-+.||||++|.++..- ++...... .... ...+--+.++.++..++-
T Consensus 145 ~~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 224 (424)
T 3mes_A 145 EGRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKEL 224 (424)
T ss_dssp TEEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHH
T ss_pred CCEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhcccc
Confidence 2689999998664210 11000000 0000 111112444444433321
Q ss_pred -----HHHHHHHh---------------------cCCCCeEeecCCCCCeEecCCCcEEEccccccee
Q 046598 811 -----CALNYLHH---------------------DCQPPIAHCDLKPSNILLDEDMIAHIGDFGLARF 852 (986)
Q Consensus 811 -----~~L~~LH~---------------------~~~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~ 852 (986)
..+..|.+ .....++|+|+.+.||+ +.++.+.++||..|..
T Consensus 225 ~~~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 225 YSKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 22333321 11336899999999999 7888999999999864
No 447
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=91.61 E-value=0.14 Score=35.68 Aligned_cols=28 Identities=21% Similarity=0.255 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeec
Q 046598 634 LKLVLAIISGLIGLSLALSIIVLCLVRK 661 (986)
Q Consensus 634 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 661 (986)
..++.++++|++++++++..++++++||
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRR 37 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRK 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhh
Confidence 3466666666666555554433333333
No 448
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.46 E-value=0.069 Score=59.44 Aligned_cols=30 Identities=30% Similarity=0.429 Sum_probs=25.5
Q ss_pred CeEeecCCCCCeEe------cCCCcEEEccccccee
Q 046598 823 PIAHCDLKPSNILL------DEDMIAHIGDFGLARF 852 (986)
Q Consensus 823 ~ivH~Dlkp~NIll------~~~~~~kL~DFG~a~~ 852 (986)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 4566899999998864
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=89.82 E-value=0.12 Score=36.19 Aligned_cols=26 Identities=19% Similarity=0.247 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhheeeec
Q 046598 636 LVLAIISGLIGLSLALSIIVLCLVRK 661 (986)
Q Consensus 636 ~~~~~~~~~~~~~~v~~~~~~~~~~~ 661 (986)
++.++++|++++++++..++++++||
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr 38 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRR 38 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhh
Confidence 45566666666555554433333333
No 450
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=84.74 E-value=0.68 Score=32.25 Aligned_cols=25 Identities=20% Similarity=0.616 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHhhheeeeccc
Q 046598 638 LAIISGLIGLSLALSIIVLCLVRKRK 663 (986)
Q Consensus 638 ~~~~~~~~~~~~v~~~~~~~~~~~~~ 663 (986)
++.++|++ +++++++.+++++|||+
T Consensus 15 a~~vVGvl-l~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 15 ISAVVGIL-LVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH-HHHHHHHHHHhheehhh
Confidence 33344433 33333333333444433
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=84.08 E-value=1.6 Score=42.88 Aligned_cols=91 Identities=18% Similarity=0.261 Sum_probs=66.9
Q ss_pred CccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEcccccceecCCCCCcccccccccccccccc
Q 046598 795 RSLNLIQRLNISIDVACALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAP 874 (986)
Q Consensus 795 ~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aP 874 (986)
+..+...+++++.+|+....+++++ +|--+.|+||+++.++.+++.-.|.-..+ +|
T Consensus 76 k~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~f~~~~~p~i~~RGik~~l-------------------~P 131 (215)
T 4ann_A 76 KSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELFFTRDGLPIAKTRGLQNVV-------------------DP 131 (215)
T ss_dssp GGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEEECTTSCEEESCCEETTTB-------------------SC
T ss_pred HhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEEEcCCCCEEEEEccCccCC-------------------CC
Confidence 3578899999999999988777655 78889999999999999999877764322 22
Q ss_pred ccccCCCcCcccchhhHHHHHHHHHhCCCCCCcccccccc
Q 046598 875 EYGLGSEVSISGDVYSYGILLLELITRKKPTDIMFEGDMN 914 (986)
Q Consensus 875 E~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~~~~~~~~ 914 (986)
. .++...=.-.+=+++..+++++..|+....|...
T Consensus 132 ~-----~~~ee~fL~qyKAliiall~~K~~Fe~l~~G~le 166 (215)
T 4ann_A 132 L-----PVSEAEFLTRYKALVICAFNEKQSFDALVEGNLE 166 (215)
T ss_dssp C-----CCCHHHHHHHHHHHHHHHHCTTCCHHHHHHSCGG
T ss_pred C-----CCCHHHHHHHHHHHHHHHHcCCCCHHHHHcChHh
Confidence 1 1122222445778899999999998766555433
No 452
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=82.49 E-value=1.1 Score=30.32 Aligned_cols=9 Identities=44% Similarity=0.719 Sum_probs=3.6
Q ss_pred HHHHHHHHH
Q 046598 636 LVLAIISGL 644 (986)
Q Consensus 636 ~~~~~~~~~ 644 (986)
.+.+++++.
T Consensus 12 aIAGiVvG~ 20 (38)
T 2k1k_A 12 EIVAVIFGL 20 (38)
T ss_dssp HHHHHHHHH
T ss_pred ceeeeehHH
Confidence 334444433
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=76.17 E-value=0.35 Score=54.60 Aligned_cols=61 Identities=8% Similarity=0.036 Sum_probs=17.6
Q ss_pred CCCcccccccceeEEEEEECCCCeEEEE------EEeecc--CchhHHHHHHHHHHHhcCCCCcceeeeeec
Q 046598 691 SSVNQIGEGSFGSVFKGILDDGRTTIAV------KVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTAC 754 (986)
Q Consensus 691 ~~~~~lg~G~~g~Vy~~~~~~~~~~vav------K~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 754 (986)
.+.+.+| ||.||+|.+.....+||| |..+.. ..+....+.+|..+++..+|||+++.+++.
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 3456676 999999999765578888 665431 223345688899999999999999988763
No 454
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=72.77 E-value=6 Score=38.97 Aligned_cols=83 Identities=12% Similarity=0.145 Sum_probs=60.4
Q ss_pred ccCHHHHHHHHHHHHHHHH-HHHhcCCCCeEeecCCCCCeEecCCCcEEEcccccceecCCCCCcccccccccccccccc
Q 046598 796 SLNLIQRLNISIDVACALN-YLHHDCQPPIAHCDLKPSNILLDEDMIAHIGDFGLARFLPLSSAQTSSIGAKGSIGYIAP 874 (986)
Q Consensus 796 ~l~~~~~~~i~~qi~~~L~-~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~gt~~y~aP 874 (986)
.++..++++++.+|+.... +++++ +|--+.|+||+++.++.+++.-.|.-.. ++|
T Consensus 81 ~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL~f~~~~~p~i~hRGi~~~-------------------lpP 136 (219)
T 4ano_A 81 KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENLMFNRALEPFFLHVGVKES-------------------LPP 136 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGEEECTTCCEEESCCEETTT-------------------BSS
T ss_pred hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceEEEeCCCcEEEEEcCCccc-------------------CCC
Confidence 4788899999999998877 66654 7888999999999999999987776432 223
Q ss_pred ccccCCCcCcccchhhHHHHHHHHHhCCCCCCc
Q 046598 875 EYGLGSEVSISGDVYSYGILLLELITRKKPTDI 907 (986)
Q Consensus 875 E~~~~~~~~~~sDvwSlGvvl~elltg~~pf~~ 907 (986)
.- .+..-=.-.+=+++..++.++..|+.
T Consensus 137 ~e-----~~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 137 DE-----WDDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp CS-----CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred CC-----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 21 11111234567788888888887753
No 455
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=56.63 E-value=13 Score=27.19 Aligned_cols=22 Identities=23% Similarity=0.372 Sum_probs=12.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 046598 633 ALKLVLAIISGLIGLSLALSII 654 (986)
Q Consensus 633 ~~~~~~~~~~~~~~~~~v~~~~ 654 (986)
.+.+++++++|++.+++++.+.
T Consensus 9 ~WiIi~svl~GLLLL~Lii~~L 30 (54)
T 2l8s_A 9 LWVILLSAFAGLLLLMLLILAL 30 (54)
T ss_dssp THHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666555444443
No 456
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=54.49 E-value=8 Score=26.95 Aligned_cols=22 Identities=18% Similarity=0.443 Sum_probs=9.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhh
Q 046598 633 ALKLVLAIISGLIGLSLALSIIV 655 (986)
Q Consensus 633 ~~~~~~~~~~~~~~~~~v~~~~~ 655 (986)
....+++++ .++.+.+++++.+
T Consensus 14 Ia~~vVGvl-l~vi~~l~~~~~~ 35 (44)
T 2jwa_A 14 IISAVVGIL-LVVVLGVVFGILI 35 (44)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHH
T ss_pred hHHHHHHHH-HHHHHHHHHHhhe
Confidence 445555544 3444444444433
No 457
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=53.33 E-value=9 Score=26.74 Aligned_cols=31 Identities=23% Similarity=0.288 Sum_probs=15.8
Q ss_pred HHHHHHHHH-HHHHHHHhhheeeecccccCCC
Q 046598 638 LAIISGLIG-LSLALSIIVLCLVRKRKEKQNP 668 (986)
Q Consensus 638 ~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~ 668 (986)
.++++++++ ++++++++...++..|+++++.
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 345555554 4444444445556666665543
No 458
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=49.09 E-value=20 Score=26.21 Aligned_cols=22 Identities=14% Similarity=0.376 Sum_probs=12.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 046598 633 ALKLVLAIISGLIGLSLALSII 654 (986)
Q Consensus 633 ~~~~~~~~~~~~~~~~~v~~~~ 654 (986)
.+.+++++++|++.+++++.+.
T Consensus 12 ~wiIi~svl~GLllL~li~~~L 33 (54)
T 2knc_A 12 IWWVLVGVLGGLLLLTILVLAM 33 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666665555444433
No 459
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=48.97 E-value=13 Score=25.41 Aligned_cols=12 Identities=8% Similarity=0.252 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHH
Q 046598 635 KLVLAIISGLIG 646 (986)
Q Consensus 635 ~~~~~~~~~~~~ 646 (986)
.++.++++|++.
T Consensus 14 ~I~~~vv~Gv~l 25 (41)
T 2k9y_A 14 AVIGGVAVGVVL 25 (41)
T ss_dssp HHHHHHHHHHHH
T ss_pred EEEeehhHHHHH
Confidence 344455555544
No 460
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=42.27 E-value=20 Score=23.02 Aligned_cols=30 Identities=23% Similarity=0.358 Sum_probs=16.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhheeeec
Q 046598 632 LALKLVLAIISGLIGLSLALSIIVLCLVRK 661 (986)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 661 (986)
++..+.+.+++|++++++++..-+++|+.|
T Consensus 4 thl~malt~i~gl~vif~~lg~tflywrgr 33 (40)
T 2l9u_A 4 THLTMALTVIAGLVVIFMMLGGTFLYWRGR 33 (40)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhCceeEEEccc
Confidence 345566667777766665555444444433
No 461
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=40.95 E-value=24 Score=26.64 Aligned_cols=18 Identities=22% Similarity=0.554 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 046598 639 AIISGLIGLSLALSIIVL 656 (986)
Q Consensus 639 ~~~~~~~~~~~v~~~~~~ 656 (986)
++++|.+++++.+.+.++
T Consensus 12 ivlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHH
Confidence 445555555555555555
No 462
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=39.56 E-value=8.1 Score=27.03 Aligned_cols=29 Identities=24% Similarity=0.325 Sum_probs=12.1
Q ss_pred HHHHHHHHH-HHHHHHHhhheeeecccccC
Q 046598 638 LAIISGLIG-LSLALSIIVLCLVRKRKEKQ 666 (986)
Q Consensus 638 ~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~ 666 (986)
.++++++++ +++++++++.+++..|++++
T Consensus 11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ceEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 334444443 33333333344444455444
No 463
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=38.87 E-value=46 Score=28.03 Aligned_cols=40 Identities=25% Similarity=0.248 Sum_probs=16.8
Q ss_pred cCCcchhccccCceeeceecccCCCCccchhcCccccceec
Q 046598 101 EIPSEFDRLRRLQVLALHYNSIGGAIPANISSCSNLIQLRL 141 (986)
Q Consensus 101 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 141 (986)
+-..+|.++++|+.+.|-.+ ++.+-..+|.++.+|+.+.+
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEE
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEE
Confidence 33444444555544444432 22233334444444444444
No 464
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=36.06 E-value=44 Score=28.12 Aligned_cols=49 Identities=10% Similarity=0.098 Sum_probs=38.1
Q ss_pred CCcccccCCccccCCCCCCEEEccCccccCcCCCcccCCCCCCEEEccCc
Q 046598 366 NNQIFGNIPAAIGKFVNLQRLDMCSNRLSGTIPPAIGELQNLKDLRLQRN 415 (986)
Q Consensus 366 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 415 (986)
+..++.+-..+|.++++|+.+.+-.+ ++.+-..+|.++.+|+.+.+...
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 34556667788999999999999876 44477788999999998888654
No 465
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=34.53 E-value=52 Score=22.71 Aligned_cols=21 Identities=14% Similarity=0.354 Sum_probs=11.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 046598 633 ALKLVLAIISGLIGLSLALSI 653 (986)
Q Consensus 633 ~~~~~~~~~~~~~~~~~v~~~ 653 (986)
.+.+++++++|++.+.+++.+
T Consensus 10 ~wiIi~s~l~GLllL~li~~~ 30 (42)
T 2k1a_A 10 IWWVLVGVLGGLLLLTILVLA 30 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 455566666666555444433
No 466
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=26.65 E-value=4.7e+02 Score=29.92 Aligned_cols=47 Identities=19% Similarity=0.087 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHHHH--HHHHHHhcCCCCeEeecCCCCCeEecCCCcEEEcccccce
Q 046598 798 NLIQRLNISIDVAC--ALNYLHHDCQPPIAHCDLKPSNILLDEDMIAHIGDFGLAR 851 (986)
Q Consensus 798 ~~~~~~~i~~qi~~--~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~ 851 (986)
.+..+..+++.+|- .+.|+=.. ||=.++|||++.+|++.=+|||.+-
T Consensus 453 ~~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 453 SAEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred cHHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 45566667766653 45555533 6888999999999999999999883
No 467
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=24.55 E-value=16 Score=20.36 Aligned_cols=9 Identities=44% Similarity=1.302 Sum_probs=7.2
Q ss_pred CCCcceeeE
Q 046598 48 HFCQWRGVT 56 (986)
Q Consensus 48 ~~c~w~gv~ 56 (986)
..|+|+|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 469999975
No 468
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=28.68 E-value=18 Score=24.26 Aligned_cols=13 Identities=31% Similarity=0.723 Sum_probs=5.6
Q ss_pred HHHhhheeeeccc
Q 046598 651 LSIIVLCLVRKRK 663 (986)
Q Consensus 651 ~~~~~~~~~~~~~ 663 (986)
++++++...|++|
T Consensus 23 isLIiLi~~w~qK 35 (39)
T 2l6w_A 23 ISLIILIMLWQKK 35 (39)
Confidence 3334444444444
No 469
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=22.76 E-value=92 Score=20.83 Aligned_cols=22 Identities=23% Similarity=0.446 Sum_probs=12.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 046598 633 ALKLVLAIISGLIGLSLALSII 654 (986)
Q Consensus 633 ~~~~~~~~~~~~~~~~~v~~~~ 654 (986)
...++.++++|+++..+.++..
T Consensus 12 i~lII~~vmaGiIG~IllI~y~ 33 (40)
T 1afo_A 12 ITLIIFGVMAGVIGTILLISYG 33 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666677776665555443
No 470
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=21.90 E-value=2.3e+02 Score=29.71 Aligned_cols=144 Identities=16% Similarity=0.146 Sum_probs=71.1
Q ss_pred CCCCcccccccceeEEEEEECCCCeEEEEEEeeccCchhHHHHHHHHHHHhcCCCCcceeeeeecc-------------c
Q 046598 690 FSSVNQIGEGSFGSVFKGILDDGRTTIAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACS-------------G 756 (986)
Q Consensus 690 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-------------~ 756 (986)
+..++....|.. .||.+..+ +..|+||-.. ....+.+-.++...-.+.-|+..-+. +.. .
T Consensus 71 v~~I~~s~~Gst-gvff~~td--~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~-~~~~E~~e~~~~L~~~~ 143 (342)
T 1cja_A 71 FKGIERSEKGTE-GLFFVETE--SGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVS-SNSEEGTNMLECLAAID 143 (342)
T ss_dssp EEEEEECCSTTS-CEEEEEES--SCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEE-SSSHHHHHHHHHHHHHC
T ss_pred eeEEEeccCCCC-CeEEEEeC--CCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEe-eCcHHHHHHHHHHHHhh
Confidence 334455556654 45544443 5688899431 22233444444444445555532221 110 0
Q ss_pred c-----ccCCCceEEEEEEeccCCCHhHhhccCCCCCccccCCCccCHHHHHHHHHHH--HHHHHHHHhcCCC-Ce-Eee
Q 046598 757 V-----DYQGNDFKALVFEFMHNRSLEEWLHPITREDETDEAPRSLNLIQRLNISIDV--ACALNYLHHDCQP-PI-AHC 827 (986)
Q Consensus 757 ~-----~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi--~~~L~~LH~~~~~-~i-vH~ 827 (986)
. .........++|||.+|..|.+.-... ....+.. +.+.++ .-+++.+..+... +. .+.
T Consensus 144 ~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~--------~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n 211 (342)
T 1cja_A 144 KSFRVITTLANQANILLMELVRGITLNKLTTTS--------APEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTN 211 (342)
T ss_dssp SSSCHHHHHTTCSEEEEEECCCEEESTTCCSSS--------HHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCS
T ss_pred hhhHHHHHhhcccceehhhhcCCCccccchhhh--------hhhhcCH----HHHHhhchhheehhhhcCCccCcccccC
Confidence 0 001123567999999886665432100 0011222 223332 2345555554211 11 222
Q ss_pred cCCCCCeEecCCCc-EEEccccccee
Q 046598 828 DLKPSNILLDEDMI-AHIGDFGLARF 852 (986)
Q Consensus 828 Dlkp~NIll~~~~~-~kL~DFG~a~~ 852 (986)
--.+.|||+++++. +.++|-+.+..
T Consensus 212 ~GN~~NIL~~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 212 EGNLDNIMLSERGATVVPIDSKIIPL 237 (342)
T ss_dssp CCCGGGEEEESBTTCEEECSCCCCCC
T ss_pred CCChhheEEeCCCCeEEEEcCCcccc
Confidence 35788999987655 88999988854
Done!